BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012673
(458 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224122352|ref|XP_002330602.1| predicted protein [Populus trichocarpa]
gi|222872160|gb|EEF09291.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/485 (65%), Positives = 376/485 (77%), Gaps = 28/485 (5%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH 60
ML+TDES WY ELQ A+PS++WHV GS SS FV ++LT + L+ + + + +
Sbjct: 107 MLITDESCKHWYQELQSNALPSVKWHVFSGSPSSGFVKTSNVLTTETLRKHVIGTKQLDY 166
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD------------- 107
SWAPEGAVIICFTSGTTG PKGV++SHSA+IVQSLAK+A VGY EDD
Sbjct: 167 SWAPEGAVIICFTSGTTGRPKGVIVSHSAMIVQSLAKVAAVGYSEDDFLIIWRIVALVAR 226
Query: 108 --------------VYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHC 153
VYLHTAPLCHIGGLSSA+ MLMVG CHV IPKFE+ A+EA++QHC
Sbjct: 227 NDCWLDSLFLGLLQVYLHTAPLCHIGGLSSAITMLMVGGCHVLIPKFEASLAIEAIKQHC 286
Query: 154 VTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISA 213
VTSLITVPA+MADL +L R+K+TWKGR VKK+LNGGG L +ELMK+AT FP+AKL+SA
Sbjct: 287 VTSLITVPAMMADLISLTRLKETWKGRQYVKKLLNGGGSLSAELMKDATELFPRAKLLSA 346
Query: 214 YGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD 273
YGMTET SSLTFMTL+DPTL+TP Q Q +S HQP GVCVGKP PHVELK+ +D
Sbjct: 347 YGMTETCSSLTFMTLHDPTLQTPAQTLQTVDKTKSSSAHQPHGVCVGKPPPHVELKISAD 406
Query: 274 GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRI 333
S +GRILTRG H+MLRYWDQ K + ST + WLDTGDIGSIDD GNVWLVGR+N +I
Sbjct: 407 EPSTIGRILTRGPHLMLRYWDQNPMKATESTNDFWLDTGDIGSIDDCGNVWLVGRQNAQI 466
Query: 334 KSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSS 393
KSGGEN+YPEEVEA+LLQHPG+I VVVG+ ARLTEMVVAC++LR+SWQW+ +NC QS+
Sbjct: 467 KSGGENIYPEEVEAMLLQHPGVIATVVVGVPEARLTEMVVACIKLRQSWQWTNNNCKQSA 526
Query: 394 KNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
+N L L EVLR +CREK LTGFK P+LF+LWRKPFPLT+TGKIRRD+VRREVMSHL+
Sbjct: 527 ENN-LTLCREVLRDYCREKKLTGFKVPKLFILWRKPFPLTTTGKIRRDQVRREVMSHLQF 585
Query: 454 LPSNL 458
PSNL
Sbjct: 586 FPSNL 590
>gi|225444051|ref|XP_002263998.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal isoform 1 [Vitis vinifera]
gi|297740839|emb|CBI31021.3| unnamed protein product [Vitis vinifera]
Length = 565
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 314/460 (68%), Positives = 376/460 (81%), Gaps = 3/460 (0%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVN--KRDMLTADILKGYSLRSLPF 58
ML+TD S WY +L++ +PSLRWHV + S SD V+ LT ++LK +L+SL F
Sbjct: 107 MLITDSSCSYWYPKLENDHLPSLRWHVFM-DSLSDVVSIVLFSALTTEMLKKPALKSLSF 165
Query: 59 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI 118
++WAPEGAV+ICFTSGTTG PKGV ISHSALI+QSLAKIAIVGY EDDVYLHTAPLCHI
Sbjct: 166 NYAWAPEGAVLICFTSGTTGRPKGVTISHSALIIQSLAKIAIVGYDEDDVYLHTAPLCHI 225
Query: 119 GGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
GGLSSA+ MLMVG CH+FIPKF++K ALEA++QH VTSLITVPAIM DL ++IR+K TWK
Sbjct: 226 GGLSSALTMLMVGGCHIFIPKFDAKLALEAIKQHHVTSLITVPAIMVDLVSIIRMKMTWK 285
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
+SVKKILNGGGGL + L+++A FP+AK++SAYGMTET SSLTFMTLYDPT + Q
Sbjct: 286 VTESVKKILNGGGGLSNGLIEDAIKFFPRAKILSAYGMTETCSSLTFMTLYDPTCASSRQ 345
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA 298
Q F + +S H P+GVCVGKPAPHVELK+C D S HVGRILTRG H+MLRYWDQ +
Sbjct: 346 ALQEFVEIKSSSFHLPEGVCVGKPAPHVELKICFDSSDHVGRILTRGPHIMLRYWDQISS 405
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+PS S E WLDTGDIGSIDD GN+WL+GR N RIKSGGENVYPEEVE VL QHPG+ G
Sbjct: 406 RPSDSPDEGWLDTGDIGSIDDYGNIWLIGRTNNRIKSGGENVYPEEVETVLSQHPGVTGS 465
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVVG+ + RLTEMVVAC+R++++WQW++++ ++ KEL+LSSE LR HCREKNLTGFK
Sbjct: 466 VVVGLPDVRLTEMVVACIRIKDNWQWADNSPVHPTEKKELVLSSETLRHHCREKNLTGFK 525
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
P+LF LWRKPFPLTSTGK+RR +V+REV+SHL SLPSNL
Sbjct: 526 IPKLFTLWRKPFPLTSTGKLRRYQVQREVLSHLHSLPSNL 565
>gi|356533059|ref|XP_003535086.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like [Glycine max]
Length = 560
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 305/458 (66%), Positives = 366/458 (79%), Gaps = 4/458 (0%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH 60
MLVTDESS + Y +LQ +PSL+WH+ L S SSDF K ++LTA++LK + ++ LPF +
Sbjct: 107 MLVTDESSYARYSKLQQNDVPSLKWHILLDSPSSDF-TKWNVLTAEMLKRHPVKLLPFDY 165
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
SWAPEGAVIICFTSGTTG PKGV +SH ALI+QSLAKIAIVGY EDDVYLHTAPL HIGG
Sbjct: 166 SWAPEGAVIICFTSGTTGKPKGVTLSHGALIIQSLAKIAIVGYNEDDVYLHTAPLFHIGG 225
Query: 121 LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
LSSAM MLMVG CHV +PKF+++SA++A+EQ+ VTS ITVPAIMA L ++IR K+TW+G
Sbjct: 226 LSSAMTMLMVGGCHVLMPKFDAESAVDAIEQYAVTSFITVPAIMASLISIIRHKETWQGG 285
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
D+VKKILNGGG L EL+K+ + F KAKLISAYGMTET SSLTF+TLY+P ET Q
Sbjct: 286 DTVKKILNGGGSLSHELIKDTSIFFHKAKLISAYGMTETCSSLTFLTLYEPMHETTSQSL 345
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKP 300
QAFG +HQ QGVCVGK APH+ELK+ +D S H+GRILTRG H+MLRYWDQ L P
Sbjct: 346 QAFGVAGSKLIHQQQGVCVGKAAPHIELKISADASGHIGRILTRGPHIMLRYWDQTLTNP 405
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
E WLDTGDIGSID GN+WL+GR NGRIKSGGEN+YPEEVEA+L QHPGI +VV
Sbjct: 406 LNPNNEAWLDTGDIGSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILQQHPGIASVVV 465
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VGI +A LTEMV AC++LRE+WQWSE S+ N+E LLS + L Q+C E +L+ FK P
Sbjct: 466 VGIPDAHLTEMVAACIQLRENWQWSE---QLSASNEEFLLSRKNLYQYCLENHLSRFKIP 522
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
+ F++WRKPF LT+TGKIRRD+VR+EVMS L+SL SNL
Sbjct: 523 KTFIVWRKPFQLTTTGKIRRDQVRKEVMSQLQSLHSNL 560
>gi|356555885|ref|XP_003546260.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like isoform 1 [Glycine max]
Length = 560
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 299/458 (65%), Positives = 365/458 (79%), Gaps = 4/458 (0%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH 60
+LV DESS +WY +LQ +PSL+WH+ L S SSDF +K ++LT ++LK + ++ LPF +
Sbjct: 107 LLVIDESSYTWYSKLQQNDVPSLKWHILLDSPSSDF-SKWNVLTPEMLKRHPIKLLPFDY 165
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
SWAP+GAVIICFTSGTTG PKGV +SH AL +QSLAKIAIVGY DDVYLHTAPLCHIGG
Sbjct: 166 SWAPDGAVIICFTSGTTGKPKGVTLSHGALTIQSLAKIAIVGYNVDDVYLHTAPLCHIGG 225
Query: 121 LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
LSSAM MLMVG CHV +PKF+++SA++A+EQH VTS ITVPAIMA L ++IR K+TWKG
Sbjct: 226 LSSAMTMLMVGGCHVLMPKFDAESAVDAIEQHAVTSFITVPAIMASLISIIRHKETWKGG 285
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
++VKKILNGGG L EL+K+ + F KAKLISAYGMTET SSLTF+TLYDP ET Q
Sbjct: 286 ETVKKILNGGGSLSHELIKDTSIFFHKAKLISAYGMTETCSSLTFLTLYDPMHETTNQSL 345
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKP 300
QAFG +HQ QGVC+GK APH+ELK+ +D S H GRILTRG H+MLRYWDQ L P
Sbjct: 346 QAFGVAGSKLIHQQQGVCIGKAAPHIELKISADASGHTGRILTRGPHIMLRYWDQTLTNP 405
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
WLDTGDIGSID GN+WL+GR NGRIKSGGEN+YPEEVEA+L QHPGI +VV
Sbjct: 406 LNPNKRAWLDTGDIGSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILQQHPGIASVVV 465
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VGI +A LTEMV AC++LRE+WQWSE S+ N+E LLS + ++Q+C E +L+ FK P
Sbjct: 466 VGIPDAHLTEMVAACIQLRENWQWSE---QLSASNEEFLLSRKNIQQYCIENHLSRFKIP 522
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
++F++WRKPFPLT+ GKI+RD+VR+EVMS L+SL SNL
Sbjct: 523 KMFIVWRKPFPLTTIGKIKRDQVRKEVMSQLQSLHSNL 560
>gi|359483953|ref|XP_003633043.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal isoform 2 [Vitis vinifera]
Length = 545
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 299/466 (64%), Positives = 356/466 (76%), Gaps = 35/466 (7%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH 60
ML+TD S WY +L++ +PSLRWHV + S S + ++ LT ++LK +L+SL F +
Sbjct: 107 MLITDSSCSYWYPKLENDHLPSLRWHVFMDSLSE--FSSKETLTTEMLKKPALKSLSFNY 164
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
+WAPEGAV+ICFTSGTTG PKGV ISHSALI+QSLAKIAIVGY EDDVYLHTAPLCHIGG
Sbjct: 165 AWAPEGAVLICFTSGTTGRPKGVTISHSALIIQSLAKIAIVGYDEDDVYLHTAPLCHIGG 224
Query: 121 LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLI--------R 172
LSSA+ MLMVG CH+FIPKF++K ALEA++QH VTSLITVPAIM DL ++I R
Sbjct: 225 LSSALTMLMVGGCHIFIPKFDAKLALEAIKQHHVTSLITVPAIMVDLVSIISSGLESFVR 284
Query: 173 VKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT 232
+K TWK +SVKKILNGG MTET SSLTFMTLYDPT
Sbjct: 285 MKMTWKVTESVKKILNGG-------------------------MTETCSSLTFMTLYDPT 319
Query: 233 LETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRY 292
+ Q Q F + +S H P+GVCVGKPAPHVELK+C D S HVGRILTRG H+MLRY
Sbjct: 320 CASSRQALQEFVEIKSSSFHLPEGVCVGKPAPHVELKICFDSSDHVGRILTRGPHIMLRY 379
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
WDQ ++PS S E WLDTGDIGSIDD GN+WL+GR N RIKSGGENVYPEEVE VL QH
Sbjct: 380 WDQISSRPSDSPDEGWLDTGDIGSIDDYGNIWLIGRTNNRIKSGGENVYPEEVETVLSQH 439
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
PG+ G VVVG+ + RLTEMVVAC+R++++WQW++++ ++ KEL+LSSE LR HCREK
Sbjct: 440 PGVTGSVVVGLPDVRLTEMVVACIRIKDNWQWADNSPVHPTEKKELVLSSETLRHHCREK 499
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
NLTGFK P+LF LWRKPFPLTSTGK+RR +V+REV+SHL SLPSNL
Sbjct: 500 NLTGFKIPKLFTLWRKPFPLTSTGKLRRYQVQREVLSHLHSLPSNL 545
>gi|357448509|ref|XP_003594530.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355483578|gb|AES64781.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 562
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 296/467 (63%), Positives = 358/467 (76%), Gaps = 15/467 (3%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH 60
MLV DES SWY + Q +P L+WHV L S SSDF NK ++LT ILK + ++ L F +
Sbjct: 102 MLVIDESCYSWYFKFQQNDVPFLKWHVLLDSPSSDFTNKWNVLTPGILKRHHVKPLEFNY 161
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
SWAPEGAVIICFTSGTTG PKGV ISH ALI+QSLAKIAIVGY EDDVYLHTAPLCHIGG
Sbjct: 162 SWAPEGAVIICFTSGTTGKPKGVTISHEALIIQSLAKIAIVGYSEDDVYLHTAPLCHIGG 221
Query: 121 LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
LSSAMAMLMVG CHVF+PKF+++ A+ +E++ VTSLITVPAIM L +++R K+TWKG
Sbjct: 222 LSSAMAMLMVGGCHVFMPKFDAELAVGDIERYNVTSLITVPAIMTSLISIVRRKETWKGG 281
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYG--------MTETSSSLTFMTLYDPT 232
++VKKILNGGG L EL+K+ F KAKLISAYG MTE SSLTF+TLYDP
Sbjct: 282 ETVKKILNGGGSLSFELIKDTHIFFHKAKLISAYGRSFLTQCWMTEACSSLTFLTLYDPM 341
Query: 233 LETPGQLPQAFG-NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLR 291
+T Q +G + + +HQPQGVCVGK APHVELK+C DG + GRILTRG H+MLR
Sbjct: 342 QKTISHPFQTYGEEESKHLIHQPQGVCVGKAAPHVELKICKDGDT--GRILTRGPHLMLR 399
Query: 292 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
YWDQ L S EVW DTGDIG +D GN+WL+GR NGRIKSGGEN+YPEEVEA+LL+
Sbjct: 400 YWDQTLTNTSNQRSEVWFDTGDIGLMDCHGNLWLLGRTNGRIKSGGENIYPEEVEAILLE 459
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
HPGI +V+VGI +AR TEMV AC++ RE+WQW E S+ N+E LS + L+Q+C E
Sbjct: 460 HPGIARVVIVGIPDARFTEMVAACIQPRENWQWLE----HSTSNEEFHLSRKNLQQYCLE 515
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
NL+ FK P++F+ WRKPFPLT+TGKIRRD+VR+EV+S ++SL SNL
Sbjct: 516 NNLSRFKIPKIFIEWRKPFPLTTTGKIRRDQVRKEVLSEIQSLHSNL 562
>gi|255575310|ref|XP_002528558.1| AMP dependent CoA ligase, putative [Ricinus communis]
gi|223532002|gb|EEF33813.1| AMP dependent CoA ligase, putative [Ricinus communis]
Length = 551
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 290/471 (61%), Positives = 348/471 (73%), Gaps = 39/471 (8%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH 60
M V DES WY EL+ +IPSL WHV L SSS + ++LT D L+ + S +
Sbjct: 107 MFVADESCSFWYSELKINSIPSLMWHVFLDFSSSSVIQASNILTTDTLRKQGIGSPELNY 166
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
SWAPE AV+ICFTSGTTG PKGV+ISHSAL VQSLAK+A VGY EDDVYLHTAPLCHIGG
Sbjct: 167 SWAPERAVLICFTSGTTGRPKGVLISHSALTVQSLAKVAFVGYCEDDVYLHTAPLCHIGG 226
Query: 121 LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATL---------- 170
LSSAMAMLMVGACHVFIPKF + A++ ++QH VTSLITVPA M DL +L
Sbjct: 227 LSSAMAMLMVGACHVFIPKFNASLAVDVIDQHNVTSLITVPATMGDLISLTSQLAQFIFQ 286
Query: 171 ---IRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT 227
+R K+TWKGR ++KK+LNGG MTE+ SSLTFMT
Sbjct: 287 RNFVREKETWKGRHTLKKMLNGG-------------------------MTESCSSLTFMT 321
Query: 228 LYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAH 287
LYDPTLETP QL Q +G SV+QPQGVCVGKPAPHVE+K+C DGSSH GRILTRG H
Sbjct: 322 LYDPTLETPDQLLQTYGRTKLTSVNQPQGVCVGKPAPHVEIKICPDGSSHSGRILTRGPH 381
Query: 288 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 347
MLRYWDQ ++ S T E+WLDTGDIG ID GN+WL+GR N RIKSGGENV+PEEVEA
Sbjct: 382 AMLRYWDQTPSEASDRTNEIWLDTGDIGIIDGSGNLWLIGRANNRIKSGGENVHPEEVEA 441
Query: 348 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 407
+LLQHPG+ +V+GI +ARL EMVVAC+RLRE W+WS +C + KE+LL SE+L++
Sbjct: 442 ILLQHPGVAAAIVLGIPDARLMEMVVACIRLREGWRWSNDDC-KPLAGKEILLCSEILQK 500
Query: 408 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
+CREKNL+ FK P++F++WRKPFPLT++GKIRRD++R EV SHL+ LPS+L
Sbjct: 501 YCREKNLSRFKVPKIFIIWRKPFPLTTSGKIRRDQIRGEVTSHLQFLPSSL 551
>gi|449433565|ref|XP_004134568.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like [Cucumis sativus]
Length = 564
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 286/458 (62%), Positives = 351/458 (76%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH 60
MLV DE WY +LQ+ IPSLRWHV +GS + R LT++ LK + + ++P
Sbjct: 107 MLVIDEGGCQWYSKLQNNHIPSLRWHVFIGSHLPGYDKTRGALTSEELKKHYVINMPPNF 166
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
APEG +ICFTSGTTG PKGV I+HSALIVQ+LAK+AIVGY EDDVYLHTAPLCHIGG
Sbjct: 167 LHAPEGVALICFTSGTTGRPKGVAITHSALIVQTLAKVAIVGYSEDDVYLHTAPLCHIGG 226
Query: 121 LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
LSSA+AMLM+GA H+ IPKFE KSA+EA++ + VTSLITVPA+MADL +LIR + K R
Sbjct: 227 LSSAIAMLMLGARHILIPKFEVKSAVEAIDLYGVTSLITVPAMMADLVSLIRERDNGKTR 286
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
+SVKKILNGGGGLP EL+K+A FP+AKL+SAYGMTET SSLTF+ L DP ET
Sbjct: 287 ESVKKILNGGGGLPLELIKDAVGIFPRAKLVSAYGMTETCSSLTFLMLCDPMGETSVPHF 346
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKP 300
Q++ + SV+QP+GVCVGKPAPH+E+K+ DGSS+VGRILTRG H+MLRY+D+ A+P
Sbjct: 347 QSYEHSKCRSVYQPEGVCVGKPAPHIEIKISLDGSSNVGRILTRGPHLMLRYYDKISARP 406
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
S +VW DTGDIGSIDD GN+WLVGR NGRIKSGGEN+YPEEVE +LLQHPG+ VV
Sbjct: 407 SNDANDVWFDTGDIGSIDDNGNLWLVGRSNGRIKSGGENIYPEEVERILLQHPGVKRCVV 466
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+GI ++RLTE VACV+L E WQW E+N + + LSS +LR+HC + NLTGFK P
Sbjct: 467 IGIPDSRLTEKTVACVQLEEDWQWYETNHELLRGKIKQHLSSAILREHCMKCNLTGFKVP 526
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
+ F+ W KPFP+TS GK +RD +R EV+SHL+ L S L
Sbjct: 527 KEFIKWGKPFPVTSMGKFKRDAIRNEVISHLRLLRSTL 564
>gi|356555887|ref|XP_003546261.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like isoform 2 [Glycine max]
Length = 544
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 284/467 (60%), Positives = 347/467 (74%), Gaps = 38/467 (8%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH 60
+LV DESS +WY +LQ +PSL+WH+ L S SSDF +K ++LT ++LK + ++ LPF +
Sbjct: 107 LLVIDESSYTWYSKLQQNDVPSLKWHILLDSPSSDF-SKWNVLTPEMLKRHPIKLLPFDY 165
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
SWAP+GAVIICFTSGTTG PKGV +SH AL +QSLAKIAIVGY DDVYLHTAPLCHIGG
Sbjct: 166 SWAPDGAVIICFTSGTTGKPKGVTLSHGALTIQSLAKIAIVGYNVDDVYLHTAPLCHIGG 225
Query: 121 LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV------- 173
LSSAM MLMVG CHV +PKF+++SA++A+EQH VTS ITVPAIMA L ++IR
Sbjct: 226 LSSAMTMLMVGGCHVLMPKFDAESAVDAIEQHAVTSFITVPAIMASLISIIRYIPVFNIF 285
Query: 174 --KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 231
K+TWKG ++VKKILNGG MTET SSLTF+TLYDP
Sbjct: 286 RHKETWKGGETVKKILNGG-------------------------MTETCSSLTFLTLYDP 320
Query: 232 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLR 291
ET Q QAFG +HQ QGVC+GK APH+ELK+ +D S H GRILTRG H+MLR
Sbjct: 321 MHETTNQSLQAFGVAGSKLIHQQQGVCIGKAAPHIELKISADASGHTGRILTRGPHIMLR 380
Query: 292 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
YWDQ L P WLDTGDIGSID GN+WL+GR NGRIKSGGEN+YPEEVEA+L Q
Sbjct: 381 YWDQTLTNPLNPNKRAWLDTGDIGSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILQQ 440
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
HPGI +VVVGI +A LTEMV AC++LRE+WQWSE S+ N+E LLS + ++Q+C E
Sbjct: 441 HPGIASVVVVGIPDAHLTEMVAACIQLRENWQWSE---QLSASNEEFLLSRKNIQQYCIE 497
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
+L+ FK P++F++WRKPFPLT+ GKI+RD+VR+EVMS L+SL SNL
Sbjct: 498 NHLSRFKIPKMFIVWRKPFPLTTIGKIKRDQVRKEVMSQLQSLHSNL 544
>gi|449511136|ref|XP_004163873.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like [Cucumis sativus]
Length = 572
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 286/466 (61%), Positives = 353/466 (75%), Gaps = 8/466 (1%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH 60
MLV DE WY +LQ+ IPSLRWHV +GS + R LT++ LK + + ++P
Sbjct: 107 MLVIDEGGCQWYSKLQNNHIPSLRWHVFIGSHLPGYDKTRGALTSEELKKHYVINMPPNF 166
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
APEG +ICFTSGTTG PKGV I+HSALIVQ+LAK+AIVGY EDDVYLHTAPLCHIGG
Sbjct: 167 LHAPEGVALICFTSGTTGRPKGVAITHSALIVQTLAKVAIVGYSEDDVYLHTAPLCHIGG 226
Query: 121 LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
LSSA+AMLM+GA H+ IPKFE KSA+EA++ + VTSLITVPA+MADL +LIR + K R
Sbjct: 227 LSSAIAMLMLGARHILIPKFEVKSAVEAIDLYGVTSLITVPAMMADLVSLIRERDNGKTR 286
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYG--------MTETSSSLTFMTLYDPT 232
+SVKKILNGGGGLP EL+K+A + FP+AKL+SAYG MTET SSLTF+ L DP
Sbjct: 287 ESVKKILNGGGGLPLELIKDAVSIFPRAKLVSAYGSAFVPHCWMTETCSSLTFLMLCDPM 346
Query: 233 LETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRY 292
ET Q++ + SV+QP+GVCVGKPAPH+E+K+ DGSS+VGRILTRG H+MLRY
Sbjct: 347 GETSVPHFQSYEHSKCRSVYQPEGVCVGKPAPHIEIKISLDGSSNVGRILTRGPHLMLRY 406
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
+D+ A+PS +VW DTGDIGSIDD GN+WLVGR NGRIKSGGEN+YPEEVE +LLQH
Sbjct: 407 YDKISARPSNDANDVWFDTGDIGSIDDNGNLWLVGRSNGRIKSGGENIYPEEVERILLQH 466
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
PG+ VV+GI ++RLTE VACV+L E+WQW E+N + + LSS +LR+HC +
Sbjct: 467 PGVKRCVVIGIPDSRLTEKTVACVQLEENWQWYETNHELLRGKIKQHLSSAILREHCMKC 526
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
NLTGFK P+ F+ W KPFP+TS GK +RD +R EV+SHL+ L S L
Sbjct: 527 NLTGFKVPKEFIKWGKPFPVTSMGKFKRDAIRNEVISHLRLLRSTL 572
>gi|147837153|emb|CAN63633.1| hypothetical protein VITISV_009387 [Vitis vinifera]
Length = 520
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 280/416 (67%), Positives = 338/416 (81%), Gaps = 2/416 (0%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH 60
ML+TD S WY +L++ +PSLRWHV + S S N ++ LT ++LK +L+SL F +
Sbjct: 107 MLITDSSCSYWYPKLENDHLPSLRWHVFMDSLSE--FNSKETLTTEMLKKPALKSLSFNY 164
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
+WAPEGAV+ICFTSGTTG PKGV ISHSALI+QSLAKIAIVGY EDDVYLHTAPLCHIGG
Sbjct: 165 AWAPEGAVLICFTSGTTGRPKGVTISHSALIIQSLAKIAIVGYDEDDVYLHTAPLCHIGG 224
Query: 121 LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
LSSA+ MLMVG CH+FIPKF++K ALEA++QH VTSLITVPAIMADL ++IR+K TWK
Sbjct: 225 LSSALTMLMVGGCHIFIPKFDAKLALEAIKQHHVTSLITVPAIMADLVSIIRMKMTWKVT 284
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
+SVKKILNGGGGL + L+++A FP+AK++SAYGMTET SSLTFMTLYDPT + Q
Sbjct: 285 ESVKKILNGGGGLSNGLIEDAIKFFPRAKILSAYGMTETCSSLTFMTLYDPTCASSRQAL 344
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKP 300
Q F + +S H P+GVCVGKPAPHVELK+C D S HVGRILTRG H+MLRYWDQ ++P
Sbjct: 345 QEFVEIKSSSFHLPEGVCVGKPAPHVELKICFDSSDHVGRILTRGPHIMLRYWDQISSRP 404
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
S S E WLDTGDIGSIDD GN+WL+GR N IKSGGENVYPEEVE VL QHPG+ G VV
Sbjct: 405 SDSPDEGWLDTGDIGSIDDYGNIWLIGRTNNXIKSGGENVYPEEVETVLSQHPGVTGSVV 464
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
VG+ + RLTEMVVAC+R++++WQW++++ ++ KEL+LSSE LR HCREKNLTG
Sbjct: 465 VGLPDVRLTEMVVACIRIKDNWQWADNSPVHPTEKKELVLSSETLRHHCREKNLTG 520
>gi|22329863|ref|NP_174340.2| acyl-activating enzyme 14 [Arabidopsis thaliana]
gi|75304445|sp|Q8VYJ1.1|MENE_ARATH RecName: Full=2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal; AltName: Full=Acyl-activating
enzyme 14; AltName: Full=O-succinylbenzoyl-CoA ligase;
Flags: Precursor
gi|17979487|gb|AAL50080.1| At1g30520/F26G16_3 [Arabidopsis thaliana]
gi|29893264|gb|AAP03026.1| acyl-activating enzyme 14 [Arabidopsis thaliana]
gi|34365547|gb|AAQ65085.1| At1g30520/F26G16_3 [Arabidopsis thaliana]
gi|332193118|gb|AEE31239.1| acyl-activating enzyme 14 [Arabidopsis thaliana]
Length = 560
Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust.
Identities = 276/466 (59%), Positives = 344/466 (73%), Gaps = 20/466 (4%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNK-RDMLTADILKGYSLRSLPFT 59
+LVTDE+ SW +++Q+ IPSL+W V + S+S+DF N+ LT ++LK +L T
Sbjct: 107 LLVTDETCVSWCIDVQNGDIPSLKWRVLMESTSTDFANELNQFLTTEMLKQRTLVPSLAT 166
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIG 119
++WA + AV+ICFTSGTTG PKGV ISH A I QSLAKIAI GYGEDDVYLHT+PL HIG
Sbjct: 167 YAWASDDAVVICFTSGTTGRPKGVTISHLAFITQSLAKIAIAGYGEDDVYLHTSPLVHIG 226
Query: 120 GLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
GLSSAMAMLMVGACHV +PKF++K+AL+ +EQ+ +T ITVPA+MADL + R K
Sbjct: 227 GLSSAMAMLMVGACHVLLPKFDAKTALQVMEQNHITCFITVPAMMADLIRVNRTTKNGAE 286
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
V+KILNGGG L SEL+KEA N FP A+++SAYGMTE SSLTFMTL+DPT E+
Sbjct: 287 NRGVRKILNGGGSLSSELLKEAVNIFPCARILSAYGMTEACSSLTFMTLHDPTQES---- 342
Query: 240 PQAFGNVTPNSVHQP-QGVCVGKPAPHVELKVCSD-GSSHVGRILTRGAHVMLRYWDQFL 297
VT ++QP QG CVGKPAPH+EL V D SS VG+ILTRG H MLRYW +
Sbjct: 343 ----FKVTYPLLNQPKQGTCVGKPAPHIELMVKLDEDSSRVGKILTRGPHTMLRYWGHQV 398
Query: 298 AKPSVST-----GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
A+ +V T E WLDTGDIG+ D+ GN+WL+GR NGRIK+GGENVYPEEVEAVL++H
Sbjct: 399 AQENVETSESRSNEAWLDTGDIGAFDEFGNLWLIGRSNGRIKTGGENVYPEEVEAVLVEH 458
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
PGI+ VV+G+ + RL EMVVACVRL+E W WS D ++ LSSE L+ HCR +
Sbjct: 459 PGIVSAVVIGVIDTRLGEMVVACVRLQEKWIWS----DVENRKGSFQLSSETLKHHCRTQ 514
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
NLTGFK P+ FV W K FPLT+TGK++RDEVRR+V+SH + + S+L
Sbjct: 515 NLTGFKIPKRFVRWEKQFPLTTTGKVKRDEVRRQVLSHFQIMTSSL 560
>gi|6634775|gb|AAF19755.1|AC009917_14 Contains similarity to gi|34845 luciferase YE protein from
Pyrophorus plagiophthalamus, and contains an AMP-binding
PF|00501 domain [Arabidopsis thaliana]
Length = 581
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 276/487 (56%), Positives = 344/487 (70%), Gaps = 41/487 (8%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNK-RDMLTADILKGYSLRSLPFT 59
+LVTDE+ SW +++Q+ IPSL+W V + S+S+DF N+ LT ++LK +L T
Sbjct: 107 LLVTDETCVSWCIDVQNGDIPSLKWRVLMESTSTDFANELNQFLTTEMLKQRTLVPSLAT 166
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDV----------- 108
++WA + AV+ICFTSGTTG PKGV ISH A I QSLAKIAI GYGEDDV
Sbjct: 167 YAWASDDAVVICFTSGTTGRPKGVTISHLAFITQSLAKIAIAGYGEDDVRFLPPLICLSS 226
Query: 109 ----------YLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLI 158
YLHT+PL HIGGLSSAMAMLMVGACHV +PKF++K+AL+ +EQ+ +T I
Sbjct: 227 MKSIELNTSVYLHTSPLVHIGGLSSAMAMLMVGACHVLLPKFDAKTALQVMEQNHITCFI 286
Query: 159 TVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTE 218
TVPA+MADL + R K V+KILNGGG L SEL+KEA N FP A+++SAYGMTE
Sbjct: 287 TVPAMMADLIRVNRTTKNGAENRGVRKILNGGGSLSSELLKEAVNIFPCARILSAYGMTE 346
Query: 219 TSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP-QGVCVGKPAPHVELKVCSD-GSS 276
SSLTFMTL+DPT E+ VT ++QP QG CVGKPAPH+EL V D SS
Sbjct: 347 ACSSLTFMTLHDPTQES--------FKVTYPLLNQPKQGTCVGKPAPHIELMVKLDEDSS 398
Query: 277 HVGRILTRGAHVMLRYWDQFLAKPSVST-----GEVWLDTGDIGSIDDGGNVWLVGRRNG 331
VG+ILTRG H MLRYW +A+ +V T E WLDTGDIG+ D+ GN+WL+GR NG
Sbjct: 399 RVGKILTRGPHTMLRYWGHQVAQENVETSESRSNEAWLDTGDIGAFDEFGNLWLIGRSNG 458
Query: 332 RIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQ 391
RIK+GGENVYPEEVEAVL++HPGI+ VV+G+ + RL EMVVACVRL+E W WS D
Sbjct: 459 RIKTGGENVYPEEVEAVLVEHPGIVSAVVIGVIDTRLGEMVVACVRLQEKWIWS----DV 514
Query: 392 SSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
++ LSSE L+ HCR +NLTGFK P+ FV W K FPLT+TGK++RDEVRR+V+SH
Sbjct: 515 ENRKGSFQLSSETLKHHCRTQNLTGFKIPKRFVRWEKQFPLTTTGKVKRDEVRRQVLSHF 574
Query: 452 KSLPSNL 458
+ + S+L
Sbjct: 575 QIMTSSL 581
>gi|297845990|ref|XP_002890876.1| hypothetical protein ARALYDRAFT_313692 [Arabidopsis lyrata subsp.
lyrata]
gi|297336718|gb|EFH67135.1| hypothetical protein ARALYDRAFT_313692 [Arabidopsis lyrata subsp.
lyrata]
Length = 581
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 273/488 (55%), Positives = 345/488 (70%), Gaps = 43/488 (8%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRD-MLTADILKGYSLR-SLPF 58
+LVTDE+ SW + +Q+ IPSL+W V + S+S++ N + LT +++K +L SLP
Sbjct: 107 LLVTDETCVSWCIHVQNGDIPSLKWRVLMESTSTELANDDNQFLTTEMIKQRTLVPSLPM 166
Query: 59 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDV---------- 108
++WAP+ AV+ICFTSGTTG PKGV ISH A I QSLAKIAIVGYGEDDV
Sbjct: 167 -YAWAPDDAVVICFTSGTTGRPKGVTISHLAFITQSLAKIAIVGYGEDDVRFSPPLICLS 225
Query: 109 -----------YLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSL 157
YLHT+PL HIGGLSSAMAMLMVGACHV +PKF++K+AL+ +E + +T
Sbjct: 226 SMNSAELNTSVYLHTSPLVHIGGLSSAMAMLMVGACHVLLPKFDAKTALQVMEHNRITCF 285
Query: 158 ITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 217
ITVPA+MADL + R K V+KILNGGG L ++L++EA FP AK++SAYGMT
Sbjct: 286 ITVPAMMADLIRVNRTTKNGAENRCVRKILNGGGSLSTQLLQEAVKIFPCAKILSAYGMT 345
Query: 218 ETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP-QGVCVGKPAPHVELKVCSD-GS 275
E SSLTFMTL+DPT E+ VT + V+QP QG CVGKPAPH+EL + D S
Sbjct: 346 EACSSLTFMTLHDPTQES--------FKVTYSLVNQPKQGTCVGKPAPHIELMIKLDENS 397
Query: 276 SHVGRILTRGAHVMLRYWDQFLAKPSVS-----TGEVWLDTGDIGSIDDGGNVWLVGRRN 330
S VG+ILTRG H ML YW L + +V+ + E WLDTGDIG+ D+ GN+ L+GR N
Sbjct: 398 SRVGKILTRGPHTMLGYWGHQLVQENVASSESRSNEAWLDTGDIGTFDEFGNLCLIGRSN 457
Query: 331 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 390
GRIK+GGENVYPEEVEAVL++HPGI+ VV+G+ +ARL EMVVACVRL E+W WS D
Sbjct: 458 GRIKTGGENVYPEEVEAVLVEHPGIVSAVVIGVIDARLGEMVVACVRLHENWIWS----D 513
Query: 391 QSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
++ + LSSE L+ HCR +NLTGFK P+ FV W K FPLT+TGK++RDEVRR+VMSH
Sbjct: 514 VENRKQSFQLSSETLKHHCRTQNLTGFKIPKRFVRWEKQFPLTTTGKVKRDEVRRQVMSH 573
Query: 451 LKSLPSNL 458
+ L S+L
Sbjct: 574 FQILTSSL 581
>gi|326487970|dbj|BAJ89824.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/458 (50%), Positives = 310/458 (67%), Gaps = 23/458 (5%)
Query: 2 LVTDESSDSWYLELQHT-AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH 60
+ D + SW L L + + S+ +++++G +S + ++ D ++ S R T
Sbjct: 105 FIFDGAYSSWALRLTESKSFSSIGFYLTVGDPAST-CQGANFVSVDHIR-RSWRGTTVTE 162
Query: 61 SW-APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIG 119
AP +ICFTSGTTG PKGV ISH++LIVQSLAKIA+VGYGEDDVYLHTAPLCHIG
Sbjct: 163 PMSAPRDVALICFTSGTTGQPKGVAISHTSLIVQSLAKIAVVGYGEDDVYLHTAPLCHIG 222
Query: 120 GLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
G+SS +A LM G CHV IPKF++KSA++A+++H VT ITVPAIMADL + R K G
Sbjct: 223 GISSCLATLMAGGCHVLIPKFDAKSAIKAIQEHKVTCFITVPAIMADLLSYARKDKI-SG 281
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL-ETPGQ 238
SV KILNGGGGL EL+ A++ F A +ISAYGMTE SSLTFM + +P L ET Q
Sbjct: 282 CGSVTKILNGGGGLSDELINGASHLFFNAAIISAYGMTEACSSLTFMPINNPELQETKNQ 341
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD----GSSHVGRILTRGAHVMLRYWD 294
L +Q GVCVGKPAPHVE+++ D SS +G+ILTRG H M+ YW
Sbjct: 342 LS-----------NQSGGVCVGKPAPHVEIRIDRDESNSSSSLMGKILTRGLHTMVGYWG 390
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
S S WLDTGD G ID G +WL+GR+ GRIKSGGENVYPEEVE VL QHPG
Sbjct: 391 NNTVDTSESVRNGWLDTGDTGWIDRTGKLWLMGRQKGRIKSGGENVYPEEVELVLSQHPG 450
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ VV G+ ++RL E +V+CV +++ W+W ++ + + KE +S+ +L++HCR KNL
Sbjct: 451 VAKAVVFGVPDSRLGEKIVSCVSIKDGWRWVDATAEHQGEGKE--VSAHILQEHCRIKNL 508
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ FK PRL+ W +PFP+T+TGKIRR+E++ EV++ ++
Sbjct: 509 SRFKVPRLYYHWSRPFPVTTTGKIRREELKAEVLTCMQ 546
>gi|125560037|gb|EAZ05485.1| hypothetical protein OsI_27701 [Oryza sativa Indica Group]
Length = 559
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/471 (49%), Positives = 314/471 (66%), Gaps = 30/471 (6%)
Query: 1 MLVTDESSDSWYLELQHT-AIPSLRWHVSLG-----SSSSDFVNKRDMLTADILKGYSLR 54
+ + D S SW L L+ + ++ S+ ++ LG S +++FV+ + G + R
Sbjct: 106 VFIFDGSYSSWALRLKESNSLTSVNLYLFLGNLCSISQAANFVSVVSVEQIKRSSGGTTR 165
Query: 55 SL-PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA 113
++ P + AP +ICFTSGTTG PKGV ISH++LI+QSLAKIAIVGYGEDD+YLHTA
Sbjct: 166 AVEPVS---APNDVALICFTSGTTGRPKGVAISHTSLIIQSLAKIAIVGYGEDDIYLHTA 222
Query: 114 PLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV 173
PLCHIGG+SS +A+LM G CHV IPKF+ KSA +A+ +H VTS ITVPAIMADL + R
Sbjct: 223 PLCHIGGISSCLAILMAGGCHVLIPKFDVKSAFDAILEHRVTSFITVPAIMADLLSYARK 282
Query: 174 KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 233
+K +V KILNGGGGL SEL+ A++ FP A + SAYGMTE SSLTFM L P +
Sbjct: 283 QKILNHGMTVTKILNGGGGLSSELITGASHLFPNATIFSAYGMTEACSSLTFMVLTRPKI 342
Query: 234 ETP-GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK-----VCSDGSSHVGRILTRGAH 287
+ P QL + +GVCVGKPAPH+E++ S SS +G ILTRG H
Sbjct: 343 QEPKDQLGSS-----------SEGVCVGKPAPHIEIQINRNGSNSSSSSPIGNILTRGLH 391
Query: 288 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 347
M YW S S WLDTGDIG +D G +WL+GR+ GRIK+GGENVYPEEVE+
Sbjct: 392 TMSGYWVNNSIDTSDSVRNGWLDTGDIGWVDKTGYLWLMGRQKGRIKTGGENVYPEEVES 451
Query: 348 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 407
VL QHPG+ VV+G+ ++RL E +VACV +R+ W W ++ + +E +S+++L+
Sbjct: 452 VLSQHPGLAKAVVIGMPDSRLGEKIVACVSIRDGWNWVDARAVHKGEGRE--VSAQMLQD 509
Query: 408 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
HCR L+ FK PR++ W KPFP+T+TGKIRR++++ E+++ +K L SNL
Sbjct: 510 HCRTNKLSRFKVPRIYYQWSKPFPVTTTGKIRREQLKAEILASMK-LHSNL 559
>gi|226530235|ref|NP_001143117.1| uncharacterized protein LOC100275595 [Zea mays]
gi|195614616|gb|ACG29138.1| hypothetical protein [Zea mays]
gi|413941827|gb|AFW74476.1| putative AMP-dependent synthetase and ligase superfamily protein
[Zea mays]
Length = 575
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/404 (54%), Positives = 281/404 (69%), Gaps = 15/404 (3%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
AP+ +ICFTSGTTG PKGV ISH++LI+QSLAKIAIVGYGEDDVYLHTAPLCHIGG+S
Sbjct: 179 APDDIALICFTSGTTGRPKGVAISHTSLIIQSLAKIAIVGYGEDDVYLHTAPLCHIGGVS 238
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG--R 180
S MA+LM G CHV PKF+++SA A+++H VT ITVPAIMADL + R ++ G R
Sbjct: 239 SCMAVLMAGGCHVLAPKFDARSAFAAIQEHGVTCFITVPAIMADLLSYARKEEMAPGCGR 298
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
+V KILNGGGGLP L+ A+ SFP+A + SAYGMTE SSLTFM L P +L
Sbjct: 299 TTVTKILNGGGGLPLHLVNAASQSFPRAAIFSAYGMTEACSSLTFMALTTP------KLQ 352
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWD 294
+ GVCVGKPAPHVE+++ D GSS G +LTRG H M+ YW
Sbjct: 353 EPEPEPETQPCGHHGGVCVGKPAPHVEIRIGMDDDGTTAGSSPTGNVLTRGLHTMVGYWA 412
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
A S WLDTGD G +D+ GN+WL+GR GRIK+GGENVYPEEVE+VL QHPG
Sbjct: 413 NGKADSSECDRNGWLDTGDTGWVDEEGNLWLLGRHKGRIKTGGENVYPEEVESVLSQHPG 472
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ VVVG+ ++RL E VVACV +++ W W ++ + + +S ++L HCR K L
Sbjct: 473 VARAVVVGVPDSRLGERVVACVSVKDGWNWVDARAEHEHRGGGEEVSPQILHGHCRTKEL 532
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
+ FK PR + WR+PFP+T+TGKIRR+E++RE+++ ++ LPSNL
Sbjct: 533 SRFKVPRSYYQWRQPFPVTTTGKIRREELKRELLAAIR-LPSNL 575
>gi|413941825|gb|AFW74474.1| putative AMP-dependent synthetase and ligase superfamily protein
[Zea mays]
Length = 449
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/404 (54%), Positives = 281/404 (69%), Gaps = 15/404 (3%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
AP+ +ICFTSGTTG PKGV ISH++LI+QSLAKIAIVGYGEDDVYLHTAPLCHIGG+S
Sbjct: 53 APDDIALICFTSGTTGRPKGVAISHTSLIIQSLAKIAIVGYGEDDVYLHTAPLCHIGGVS 112
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG--R 180
S MA+LM G CHV PKF+++SA A+++H VT ITVPAIMADL + R ++ G R
Sbjct: 113 SCMAVLMAGGCHVLAPKFDARSAFAAIQEHGVTCFITVPAIMADLLSYARKEEMAPGCGR 172
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
+V KILNGGGGLP L+ A+ SFP+A + SAYGMTE SSLTFM L P +L
Sbjct: 173 TTVTKILNGGGGLPLHLVNAASQSFPRAAIFSAYGMTEACSSLTFMALTTP------KLQ 226
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWD 294
+ GVCVGKPAPHVE+++ D GSS G +LTRG H M+ YW
Sbjct: 227 EPEPEPETQPCGHHGGVCVGKPAPHVEIRIGMDDDGTTAGSSPTGNVLTRGLHTMVGYWA 286
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
A S WLDTGD G +D+ GN+WL+GR GRIK+GGENVYPEEVE+VL QHPG
Sbjct: 287 NGKADSSECDRNGWLDTGDTGWVDEEGNLWLLGRHKGRIKTGGENVYPEEVESVLSQHPG 346
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ VVVG+ ++RL E VVACV +++ W W ++ + + +S ++L HCR K L
Sbjct: 347 VARAVVVGVPDSRLGERVVACVSVKDGWNWVDARAEHEHRGGGEEVSPQILHGHCRTKEL 406
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
+ FK PR + WR+PFP+T+TGKIRR+E++RE+++ ++ LPSNL
Sbjct: 407 SRFKVPRSYYQWRQPFPVTTTGKIRREELKRELLAAIR-LPSNL 449
>gi|242080461|ref|XP_002444999.1| hypothetical protein SORBIDRAFT_07g002550 [Sorghum bicolor]
gi|241941349|gb|EES14494.1| hypothetical protein SORBIDRAFT_07g002550 [Sorghum bicolor]
Length = 557
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/461 (51%), Positives = 306/461 (66%), Gaps = 34/461 (7%)
Query: 10 SWYLELQHT-AIPSLRWHVSL------GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW 62
SW L L + PS+ ++ L G +++DF + T I++ + P +
Sbjct: 119 SWALRLMESDRFPSIGLYLLLDDPCRIGHAAADFES-----TDHIMRRATATMEPVS--- 170
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
AP +ICFTSGTTG PKGV ISH++LI+QSLAKIAIVGYGEDDVYLHTAPLCHIGG+S
Sbjct: 171 APADVALICFTSGTTGRPKGVAISHTSLIIQSLAKIAIVGYGEDDVYLHTAPLCHIGGIS 230
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
S MA+LM G CHV IPKF++KSA +A+++ VTS ITVPAIMADL + R + +
Sbjct: 231 SCMAILMAGGCHVLIPKFDAKSAFDAIQEQGVTSFITVPAIMADLLSYARKEMISDCGKT 290
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
V KILNGGGGL +L+ A+ FP+A + SAYGMTE SSLTFM L P L+ P P +
Sbjct: 291 VTKILNGGGGLSLDLLNGASQLFPRAAIFSAYGMTEACSSLTFMALNVPKLQEPNNQPGS 350
Query: 243 -FGNVTPNSVHQPQGVCVGKPAPHVELKVCSD----GSSHVGRILTRGAHVMLRYWDQFL 297
+G GVCVGKPAPHVE+++ D SS G ILTRG H M YW
Sbjct: 351 HYG-----------GVCVGKPAPHVEIRIGMDDNNTSSSPTGNILTRGFHTMAGYWANNK 399
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
S WLDTGD G ID GN+WL+GR+ GRIK+GGENVYPEEVE VL QHPG+
Sbjct: 400 VDSSDCVRNGWLDTGDTGWIDKAGNLWLMGRQKGRIKTGGENVYPEEVELVLSQHPGVAR 459
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+VVVGI ++RL E V+ACV +R+ W+W + + K KE +S ++L HCR K L+ F
Sbjct: 460 VVVVGIPDSRLGEKVIACVSIRDGWKWVHARTEHQGKGKE--VSPQILHDHCRMKKLSRF 517
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
K PR + WR+PFP+T+TGKI+R+E++RE+++ ++ LPSNL
Sbjct: 518 KVPRSYYQWRQPFPVTTTGKIKREELKREILAAIQ-LPSNL 557
>gi|357144587|ref|XP_003573345.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like [Brachypodium distachyon]
Length = 553
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/396 (54%), Positives = 281/396 (70%), Gaps = 21/396 (5%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
AP +ICFTSGTTG PKGV ISH++LI+QSLAKIA+VGYGEDDVYLHTAPLCHIGG+S
Sbjct: 168 APRDVALICFTSGTTGRPKGVAISHTSLIIQSLAKIAVVGYGEDDVYLHTAPLCHIGGIS 227
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
S +A+LM G CHV IPKF++KSA +A+++ VT ITVPAIMADL + R K+ G +
Sbjct: 228 SCLAILMAGGCHVLIPKFDAKSAFKAIQEQKVTCFITVPAIMADLLSYAR-KENISGCGA 286
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLY--DPTLETPGQLP 240
V KILNGGGGL +EL+ +A+ F A + SAYGMTE SSLTFM + +P ET QL
Sbjct: 287 VTKILNGGGGLSAELINKASCLFLHAAIFSAYGMTEACSSLTFMAINKSEPQ-ETENQLS 345
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKV----CSDGSSHVGRILTRGAHVMLRYWDQF 296
G GVCVGKPAPHVE+++ + SS +G+ILTRG H M+ YW
Sbjct: 346 SHSG-----------GVCVGKPAPHVEIQIGREDINSSSSPMGKILTRGLHTMVGYWANN 394
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
S S WLDTGD G ID GN+WL+GR+ GRIKSGGENVYPEE+E VL QHPG+
Sbjct: 395 TVDTSESVRNGWLDTGDTGWIDRTGNLWLMGRQKGRIKSGGENVYPEEIELVLSQHPGVA 454
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+VV+G+ ++RL E +VACV + + W+W ++ + + KE +SS+ L++HCR L+
Sbjct: 455 KVVVLGVPDSRLGEKLVACVNIMDDWKWVDATDEHQGEGKE--VSSQTLQEHCRINKLSR 512
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
FK PRL+ WR+PFP+T+TGKI+R+E++ E+++ L+
Sbjct: 513 FKVPRLYHQWRRPFPVTTTGKIKREELKTEILASLQ 548
>gi|222639859|gb|EEE67991.1| hypothetical protein OsJ_25931 [Oryza sativa Japonica Group]
Length = 1338
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/427 (49%), Positives = 281/427 (65%), Gaps = 27/427 (6%)
Query: 1 MLVTDESSDSWYLELQHT-AIPSLRWHVSLG-----SSSSDFVNKRDMLTADILKGYSLR 54
+ + D S SW L L+ + ++ S+ ++ LG S +++FV+ + G + R
Sbjct: 106 VFIFDGSYSSWALRLKESNSLTSVNLYLFLGNLCSISQAANFVSVVSVEQIKRSSGGTTR 165
Query: 55 SL-PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA 113
++ P + AP +ICFTSGTTG PKGV ISH++LI+QSLAKIAIVGYGEDD+YLHTA
Sbjct: 166 AVEPVS---APNDVALICFTSGTTGRPKGVAISHTSLIIQSLAKIAIVGYGEDDIYLHTA 222
Query: 114 PLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV 173
PLCHIGG+SS +A+LM G CHV IPKF+ KSA +A+ +H VTS ITVPAIMADL + R
Sbjct: 223 PLCHIGGISSCLAILMAGGCHVLIPKFDVKSAFDAILEHRVTSFITVPAIMADLLSYARK 282
Query: 174 KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 233
+K +V KILNGGGGL SEL+ A++ FP A + SAYGMTE SSLTFM L P +
Sbjct: 283 QKILNHGMTVTKILNGGGGLSSELITGASHLFPNATIFSAYGMTEACSSLTFMVLTRPKI 342
Query: 234 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK-----VCSDGSSHVGRILTRGAHV 288
+ P G+ + +GVCVGKPAPH+E++ S SS +G ILTRG H
Sbjct: 343 QEP---KDQLGSSS-------EGVCVGKPAPHIEIQINRNGSNSSSSSPIGNILTRGLHT 392
Query: 289 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 348
M YW S S WLDTGDIG +D GN+WL+GR+ GRIK+GGENVYPEEVE+V
Sbjct: 393 MSGYWVNNSIDTSDSVRNGWLDTGDIGWVDKTGNLWLMGRQKGRIKTGGENVYPEEVESV 452
Query: 349 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 408
L QHPG+ VV+G+ ++RL E +VACV +R+ W W ++ + +E +S+++L+ H
Sbjct: 453 LSQHPGLAKAVVIGMPDSRLGEKIVACVSIRDGWNWVDARAVHKGEGRE--VSAQMLQDH 510
Query: 409 CREKNLT 415
CR L+
Sbjct: 511 CRTNKLS 517
>gi|168018797|ref|XP_001761932.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686987|gb|EDQ73373.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 592
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 206/481 (42%), Positives = 285/481 (59%), Gaps = 54/481 (11%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH 60
MLV D++ + +L HT LR + LG + VN ++LT ++
Sbjct: 105 MLVLDQTCLQQWPDL-HTRCRLLRLQILLGPGLNSLVNPDEVLT------WAGSKQELDL 157
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
WAP+ +ICFTSGTTGSPKGV ISH+AL+VQSLAKIA++GY DVYLH +PLCHIGG
Sbjct: 158 KWAPDSIALICFTSGTTGSPKGVAISHNALVVQSLAKIAVIGYNSSDVYLHISPLCHIGG 217
Query: 121 LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+SSA+A +MVGA HV +PKF + + +A+ H VTS+I VPA++ADL
Sbjct: 218 ISSALANVMVGASHVILPKFHAAAVFDAIRNHDVTSMIIVPAMLADLVATSASSIGRHSF 277
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
S++ +LNG GG+P+ L+ FP A+L SAYGMTE SS++F+ + + ++ GQL
Sbjct: 278 TSIRTLLNGAGGIPALLLDSTRLLFPNAELFSAYGMTEACSSMSFIPVDEQ--DSTGQL- 334
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKV-----------CSDGSS------HVGRILT 283
GVCVGK APHVEL++ + SS G++ T
Sbjct: 335 --------------GGVCVGKAAPHVELRIGQPVTEQKSIDSHENSSPESVLFREGQVFT 380
Query: 284 RGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPE 343
RG HVM YW +V + + WL TGD+G +D+ G +WL+GR IKSGGENVY
Sbjct: 381 RGPHVMEYYWGLPSETANVLSADGWLATGDVGWMDEAGRLWLLGRSKDVIKSGGENVYAS 440
Query: 344 E-VEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE-----------SNCDQ 391
E VE VL++HPG++ + VVGI + RLTEMVVA VRLR+ W W + SN Q
Sbjct: 441 EVVENVLMKHPGMLSVAVVGIPDERLTEMVVAFVRLRDKWIWEDKYQGKLSVTGASNQIQ 500
Query: 392 SSKNKELLLSSEV-LRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
+ + S++ LR HC++ L+ +K PRL ++ ++PFP TSTGKI+++ VRR +
Sbjct: 501 LEDYRGNRVVSQIELRIHCQQLGLSRYKVPRLILVNKEPFPTTSTGKIKKNLVRRMALER 560
Query: 451 L 451
L
Sbjct: 561 L 561
>gi|302769520|ref|XP_002968179.1| hypothetical protein SELMODRAFT_89333 [Selaginella moellendorffii]
gi|300163823|gb|EFJ30433.1| hypothetical protein SELMODRAFT_89333 [Selaginella moellendorffii]
Length = 458
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 176/385 (45%), Positives = 243/385 (63%), Gaps = 34/385 (8%)
Query: 62 WAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL 121
+AP +ICFTSGTTG+PKGV ++H AL+ QSLAK+AIVGY DVYLHTAPLCHIGG+
Sbjct: 100 FAPNNIALICFTSGTTGTPKGVSLTHRALVAQSLAKLAIVGYSSMDVYLHTAPLCHIGGI 159
Query: 122 SSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT--LIRVKKTWKG 179
SS +AM+M G+ +F+PKFE+ + L+A++ + ++++I VP ++ D+ + R + +
Sbjct: 160 SSVLAMVMAGSQQLFLPKFETSAVLQALKDYEISTMIVVPTMLRDILEPGIFRKSGSDQV 219
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
S+ ILNGGG +PS L+ +FP A+L SAYGMTE SS+TF+ L G +
Sbjct: 220 FPSMLTILNGGGSVPSRLLPAVKKTFPNARLFSAYGMTEACSSMTFLRL-------DGHV 272
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAK 299
P G+ CVGKP PHV++ + GRI TRG HVM YW Q +
Sbjct: 273 PLGVGS------------CVGKPPPHVQVGIKD------GRIFTRGPHVMHGYWGQTIET 314
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
V + WLDTGDIG ID GN+WL+GR +K+GGENVY EVE VL QHP + +
Sbjct: 315 AGVLQQDGWLDTGDIGKIDKAGNLWLLGRAKDVVKTGGENVYASEVEMVLSQHPSVSSVA 374
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VVG+ +RL+E+V A VRL + W WS S + +S LR HC ++ L+ +K
Sbjct: 375 VVGVPESRLSEIVAAVVRLHDGWTWSIS-------EHPMTVSESDLRLHCSKQGLSRYKI 427
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVR 444
P+L V + PFP+TSTGK+R+D ++
Sbjct: 428 PKLIVQRQDPFPVTSTGKVRKDMIK 452
>gi|302788472|ref|XP_002976005.1| hypothetical protein SELMODRAFT_104722 [Selaginella moellendorffii]
gi|300156281|gb|EFJ22910.1| hypothetical protein SELMODRAFT_104722 [Selaginella moellendorffii]
Length = 458
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 176/385 (45%), Positives = 242/385 (62%), Gaps = 34/385 (8%)
Query: 62 WAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL 121
+AP +ICFTSGTTG+PKGV ++H AL+ QSLAK+AIVGY DVYLHTAPLCHIGG+
Sbjct: 100 FAPNNIALICFTSGTTGTPKGVSLTHRALVAQSLAKLAIVGYSSMDVYLHTAPLCHIGGI 159
Query: 122 SSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT--LIRVKKTWKG 179
SS +AM+M G+ +F+PKFE+ + +A++ + ++++I VP I+ D+ + R + +
Sbjct: 160 SSVLAMVMAGSQQLFLPKFETSAVRQALKDYNISTMIVVPTILRDILEPGIFRKSGSDQV 219
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
S+ ILNGGG +PS L+ +FP A+L SAYGMTE SS+TF+ L G +
Sbjct: 220 FPSMLTILNGGGSVPSRLLPAVKKTFPNARLFSAYGMTEACSSMTFLRL-------DGHV 272
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAK 299
P G+ CVGKP PHV++ + GRI TRG HVM YW Q +
Sbjct: 273 PLGVGS------------CVGKPPPHVQVGIKD------GRIFTRGPHVMHGYWGQTIET 314
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
V + WLDTGDIG ID GN+WL+GR +K+GGENVY EVE VL QHP + +
Sbjct: 315 AGVLQQDGWLDTGDIGKIDKAGNLWLLGRAKDVVKTGGENVYASEVEMVLSQHPSVSSVA 374
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VVG+ +RL+E+V A VRL + W WS S + +S LR HC ++ L+ +K
Sbjct: 375 VVGVPESRLSEIVAAVVRLHDGWTWSIS-------EHPMTVSESDLRLHCSKQGLSRYKI 427
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVR 444
P+L V + PFP+TSTGK+R+D ++
Sbjct: 428 PKLIVQRQDPFPVTSTGKVRKDMIK 452
>gi|115474651|ref|NP_001060922.1| Os08g0130400 [Oryza sativa Japonica Group]
gi|113622891|dbj|BAF22836.1| Os08g0130400 [Oryza sativa Japonica Group]
Length = 270
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 187/282 (66%), Gaps = 18/282 (6%)
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
+V KILNGGGGL SEL+ A++ FP A + SAYGMTE SSLTFM L P ++ P
Sbjct: 2 TVTKILNGGGGLSSELITGASHLFPNATIFSAYGMTEACSSLTFMVLTRPKIQEP---KD 58
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRI-----LTRGAHVMLRYWDQF 296
G+ + +GVCVGKPAPH+E+++ +GS+ LTRG H M YW
Sbjct: 59 QLGSSS-------EGVCVGKPAPHIEIQINRNGSNSSSSSPIGNILTRGLHTMSGYWVNN 111
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
S S WLDTGDIG +D GN+WL+GR+ GRIK+GGENVYPEEVE+VL QHPG+
Sbjct: 112 SIDTSDSVRNGWLDTGDIGWVDKTGNLWLMGRQKGRIKTGGENVYPEEVESVLSQHPGLA 171
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
VV+G+ ++RL E +VACV +R+ W W ++ + +E +S+++L+ HCR L+
Sbjct: 172 KAVVIGMPDSRLGEKIVACVSIRDGWNWVDARAVHKGEGRE--VSAQMLQDHCRTNKLSR 229
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
FK PR++ W KPFP+T+TGKIRR++++ E+++ +K L SNL
Sbjct: 230 FKVPRIYYQWSKPFPVTTTGKIRREQLKAEILASMK-LHSNL 270
>gi|302847703|ref|XP_002955385.1| hypothetical protein VOLCADRAFT_41779 [Volvox carteri f.
nagariensis]
gi|300259227|gb|EFJ43456.1| hypothetical protein VOLCADRAFT_41779 [Volvox carteri f.
nagariensis]
Length = 534
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 218/420 (51%), Gaps = 45/420 (10%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
+P G ++ FTSGTT +PK V +SH+A +QSL K+A+VGY +D YLH APL HIGGLS
Sbjct: 125 SPCGTALLVFTSGTTAAPKAVRLSHAAFHIQSLVKLALVGYCREDTYLHLAPLFHIGGLS 184
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL--------------- 167
SA A LM G VF+P+FE + L + +H V++ I VP ++ DL
Sbjct: 185 SAFAALMAGCTQVFLPRFEPRLVLRIIVRHTVSAFIAVPTMLQDLAAAATAAAAEAACGG 244
Query: 168 -----ATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSS 222
++ W V++IL G G +L +FP A L+SAYGMTE SS
Sbjct: 245 SSSGSGGTSGLRPPW---GCVRRILVGAGPTSPQLQDAICRTFPGADLLSAYGMTEACSS 301
Query: 223 LTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV-CSDGSSHVGRI 281
+TF L + P + VCVG PAP V++++ ++
Sbjct: 302 MTFRHLSSAA-------SVSPSGTPPAAAAATSAVCVGWPAPGVQIRIRIRTEAAAADAG 354
Query: 282 LTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 341
TRG HVML YW A + + WL TGD+G + G++WL+GR IKSGGENV+
Sbjct: 355 ATRGPHVMLGYWGNSAATAEAISADGWLSTGDLGYLAQDGSLWLLGRAKDMIKSGGENVF 414
Query: 342 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE----SNCDQSSKNKE 397
EVEA L HP + + VVG+ + RL E V A V LR W + + S+ +++N
Sbjct: 415 APEVEAALCSHPAVAAVAVVGLPDERLGEKVAALVVLRNEWSFQDTSTTSSTMSTNRNAT 474
Query: 398 ----------LLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 447
+ S L+ HCR + L GF+ PR R+P P TS+GK+ + EVR +
Sbjct: 475 TTTTTTTTSGCITSLADLQAHCRAQGLAGFRLPRFAAAQRQPLPTTSSGKVAKAEVRERL 534
>gi|307107262|gb|EFN55505.1| hypothetical protein CHLNCDRAFT_133905 [Chlorella variabilis]
Length = 767
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/345 (42%), Positives = 185/345 (53%), Gaps = 19/345 (5%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
AP A ++ FTSGTTG PKGV +SH+AL Q +AK+ GY DVYLH APL HIGGLS
Sbjct: 174 APGNAALVVFTSGTTGKPKGVTLSHAALHAQCMAKLLACGYSSSDVYLHAAPLFHIGGLS 233
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
SA+AML GA H F+P+F+ + L A+ H TS I VP ++ADL T + +
Sbjct: 234 SALAMLAAGARHAFLPRFDGAALLGAIRGHHATSFIAVPTMVADLLTAA-AEAGVASLPA 292
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP-TLETPGQLPQ 241
V+++L GGGGL L P A L +AYGMTE +SSLTF TL+ P
Sbjct: 293 VRRVLVGGGGLSPALRDGLAALCPAATLHAAYGMTEGASSLTFHTLWSPEAGAGAPGSSG 352
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV----------------GRILTRG 285
P + P GV VG+P P +EL V G ++TRG
Sbjct: 353 GAPAAQPGARGPPGGVFVGRPPPGIELAVYQPPGGGGGGGGSGGGGGIRFAGEGEVVTRG 412
Query: 286 AHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 345
+HVML YWD A + WL TGD+G + G +WL+GR IKSGGENV+ EV
Sbjct: 413 SHVMLGYWDDEDATAAAQLPGGWLRTGDLGCLRQ-GQLWLMGRAKDMIKSGGENVHAWEV 471
Query: 346 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 390
E L HP + VVG A+ RL E V A V LR W+W C
Sbjct: 472 ERALASHPAVAAAAVVGAADWRLGEAVAAAVVLRPGWRWRGERCQ 516
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 18/75 (24%)
Query: 396 KELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP------------------FPLTSTGK 437
+E ++ L+QHCR L GFK PR+F+L P+ STGK
Sbjct: 675 EEAVVDGRALQQHCRAAGLAGFKLPRVFLLCDAAAAAATPGRASSPSSGGVVLPVNSTGK 734
Query: 438 IRRDEVRREVMSHLK 452
+ + +R++V H++
Sbjct: 735 VVKHLLRQQVQLHMQ 749
>gi|388493538|gb|AFK34835.1| unknown [Medicago truncatula]
Length = 166
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 106/170 (62%), Positives = 133/170 (78%), Gaps = 4/170 (2%)
Query: 289 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 348
MLRYWDQ L S EVW DTGDIG +D GN+WL+GR NGRIKSGGEN+YPEEVEA+
Sbjct: 1 MLRYWDQTLTNTSNQRSEVWFDTGDIGLMDCHGNLWLLGRTNGRIKSGGENIYPEEVEAI 60
Query: 349 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 408
LL+HPGI +V+VGI +AR TEMV AC++ RE+WQW E S+ N+E LS + L+Q+
Sbjct: 61 LLEHPGIARVVIVGIPDARFTEMVAACIQPRENWQWLE----HSTSNEEFHLSRKNLQQY 116
Query: 409 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
C E NL+ FK P++F+ WRKPFPLT+TGKIRRD+VR+EV+S ++SL SNL
Sbjct: 117 CLENNLSRFKIPKIFIEWRKPFPLTATGKIRRDQVRKEVLSEIQSLHSNL 166
>gi|145341146|ref|XP_001415675.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575898|gb|ABO93967.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 356
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/386 (36%), Positives = 197/386 (51%), Gaps = 54/386 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+C+TSGT+GSPK V++SH ++ + AK+ +VGY D YLH APL H+GGLSSA A L
Sbjct: 1 MCYTSGTSGSPKAVMLSHGSVCAATRAKLEVVGYDAGDTYLHVAPLYHVGGLSSAHATLA 60
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD----SVKK 185
GA HVF+ KF+ L + VT+ I VPA+M +L +G D +V+K
Sbjct: 61 AGANHVFVNKFDPDLVLRIIVDEGVTAFIAVPAMMRELV-------DSRGGDTVFPTVRK 113
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
IL G G L EL + FP AK+ AYGMTET+SS+TF++ D E
Sbjct: 114 ILVGAGRLTDELYNSIRHVFPNAKVTMAYGMTETTSSVTFLSPEDARFEL---------- 163
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 305
G AP VE+K ++ G++L RG+ +ML Y + +
Sbjct: 164 -------DADSTFAGNAAPGVEVKTDAE-----GQLLVRGSSLMLGYVG--VDRTETFDA 209
Query: 306 EVWLDTGDIGSI------DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ W TGD+G++ + G VWL GR IKSGGENV PEEVE +L +H + V
Sbjct: 210 DGWFATGDLGAVGEARGEETGSRVWLRGRAKEMIKSGGENVSPEEVERILNKHANVEASV 269
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+G + + E VVA V+LR + +E+ LR C + L FK
Sbjct: 270 VIGAPHRKWGEAVVAIVKLRATASDTEAE------------HRTALRDWCAKSELARFKI 317
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRR 445
P+ FV + + + GK+ RD R
Sbjct: 318 PKCFV-FTEDLRSNAMGKLMRDATYR 342
>gi|308799771|ref|XP_003074666.1| acyl-activating enzyme 14 (ISS) [Ostreococcus tauri]
gi|116000837|emb|CAL50517.1| acyl-activating enzyme 14 (ISS) [Ostreococcus tauri]
Length = 515
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 147/389 (37%), Positives = 203/389 (52%), Gaps = 55/389 (14%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
+GA CFTSGTTG+ K V++H ++ + AKI +VGY DVY+H APL H+GGLSSA
Sbjct: 153 DGACAYCFTSGTTGAAKAAVLTHEGVLAATRAKIEVVGYERSDVYMHCAPLYHVGGLSSA 212
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL--ATLIRVKKTWKGRDS 182
A + GA HVF+ F+++ AL A+E+ VT+ I VP +MA L A RV DS
Sbjct: 213 HASMSAGASHVFMRSFDAERALGAIERSGVTAFIAVPTMMAMLVDAAGERVF------DS 266
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
V+KIL G G L + FP AK+ AYGM+ET+SS+TF+ DP G+L
Sbjct: 267 VRKILVGAGRLLRGQYEAIRRVFPNAKVTMAYGMSETTSSVTFL---DP---EDGRL--- 317
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSV 302
V P G+ VE++ ++G HV RG VML Y + K +
Sbjct: 318 --------VEDP--TFAGQAVRDVEVRADANGELHV-----RGPIVMLGY--HGVDKSTT 360
Query: 303 STGEVWLDTGDIGSID--------DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
+ W TGD+G + G VWL GR IK+GGENV PEEVE V+ H
Sbjct: 361 FDADGWFATGDLGRVAPAETSSACTGPRVWLYGRAKAVIKTGGENVSPEEVEGVINAHED 420
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ VVVG + + E VVA V+LR Q + + D++ + + CR+ L
Sbjct: 421 VHTSVVVGAPHEKWGETVVAIVKLR---QGTSLSVDEARPT---------VLEWCRDSRL 468
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEV 443
FK P+ ++L+ P+ GK R +V
Sbjct: 469 ARFKIPK-YILFTNEIPINMMGKFSRADV 496
>gi|407803049|ref|ZP_11149887.1| long-chain-fatty-acid-CoA ligase [Alcanivorax sp. W11-5]
gi|407022904|gb|EKE34653.1| long-chain-fatty-acid-CoA ligase [Alcanivorax sp. W11-5]
Length = 516
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 186/383 (48%), Gaps = 49/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG KGV++SH L+ +L +A +GY D VY+H P+ H+ ++S A+ +
Sbjct: 163 LFYTGGTTGRSKGVMLSHDNLVFNALNVVAEMGYDPDTVYMHAGPMFHLADMASTFAVTL 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
H +P+F+ + L ++Q VT+ + VP ++ LA+ +R+ + S+K++L G
Sbjct: 223 AAGTHGIVPRFDVDTVLAFIQQEKVTNTLLVPTMINLLASSVRIGE--YDVSSMKRMLYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG--QLPQAFGNVT 247
+P ++ A P YG TE S +T + P PG +L A
Sbjct: 281 ASPMPEAVLNSAMEQMPTVSFAQGYGQTEASPIITSL---GPEHHVPGGAKLRSA----- 332
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGR-----ILTRGAHVMLRYWDQFLAKP-S 301
G+ A VE+ V V R I RG +VML YW A +
Sbjct: 333 ------------GRAAIGVEVMVLDKDDQEVARGTVGEICARGPNVMLGYWGMESATAET 380
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ G WL TGD+G +D+ G V++V R + SGGEN++ EVE + HP + V+
Sbjct: 381 LRNG--WLHTGDLGYMDEDGFVFIVDRAKDMVISGGENIFSVEVEGAIYSHPAVQECAVI 438
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI + E V A V LR+ SE +E++ HCREK + G+K PR
Sbjct: 439 GIPDEHWGEAVHALVVLRDGVSASE---------------TEII-AHCREK-IAGYKVPR 481
Query: 422 LFVLWRKPFPLTSTGKIRRDEVR 444
+P P++ GKI ++E+R
Sbjct: 482 SVEFRSEPLPVSGAGKILKNELR 504
>gi|254426993|ref|ZP_05040700.1| AMP-binding enzyme, putative [Alcanivorax sp. DG881]
gi|196193162|gb|EDX88121.1| AMP-binding enzyme, putative [Alcanivorax sp. DG881]
Length = 516
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 188/385 (48%), Gaps = 53/385 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG KGV++SH L+ +L +A +GY D +Y+H P+ H+ ++S A+ +
Sbjct: 163 LFYTGGTTGRSKGVMLSHDNLVFNALNVVAEMGYDSDTIYMHAGPMFHLADMASTFAVTL 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
H +P+F+ L +EQ VT+ + VP ++ LA+ R+ S+K++L G
Sbjct: 223 AAGTHGIVPRFDVDEVLAFIEQEKVTNTLLVPTMVNLLASSGRIAN--YDVSSIKRMLYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG--QLPQAFGNVT 247
+P ++ A P YG TE S +T + P PG +L A
Sbjct: 281 ASPMPEAVLISAMEQMPTVSFAQGYGQTEASPIITSL---GPEHHIPGGEKLRSA----- 332
Query: 248 PNSVHQPQGVCVGKPAPHVEL-------KVCSDGSSHVGRILTRGAHVMLRYWD-QFLAK 299
G+ A VE+ +V S G+ VG I RG +VML YW +
Sbjct: 333 ------------GRAALGVEVVVLDENDQVVSQGT--VGEICARGPNVMLGYWGMESTTA 378
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
++ G WL TGD+G +D+ G V++V R + SGGEN++ EVE + HP +
Sbjct: 379 DTLRNG--WLHTGDLGYMDEDGFVFIVDRAKDMVISGGENIFSVEVEGAIYSHPAVQECA 436
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+GI + R E V A V LRE SE +E++ +HCRE+ + G+K
Sbjct: 437 VIGIPDERWGEAVHAIVVLREGEHASE---------------AEII-EHCRER-IAGYKV 479
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVR 444
PR + P++ GK+ ++E+R
Sbjct: 480 PRSVDFKAESLPVSGAGKVLKNELR 504
>gi|298714511|emb|CBJ27533.1| Acyl-CoA Synthase, 2,3-dihydroxybenzoyl)adenylate synthase
[Ectocarpus siliculosus]
Length = 623
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 194/398 (48%), Gaps = 37/398 (9%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSG+TG KGV ++H + Q+ AK +G+ YL+ PL H+GG+S+A+A+ +
Sbjct: 237 IVYTSGSTGRSKGVALTHEGQVFQADAKCVQLGFTSSTTYLNVLPLFHVGGVSAALAVTL 296
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-----SVK 184
VG CHVF+P+F A+ A++ V S++ VP ++ L + + +V
Sbjct: 297 VGGCHVFVPRFAPGCAIAAIQAGRVNSIVVVPTMLHMLVKEASSESSTSDDTANPLAAVD 356
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ--- 241
++ GG + L + A P ++ + Y TE S++ F + P+L + P
Sbjct: 357 TVVVGGQPMSGRLERLARGCMPGSRFVQTYACTEAGSTIAFA--FSPSLGASQRDPNGGC 414
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------------VGRILTRGAHVM 289
+ P H+ G PA HVE++V GSS VG + TRG HVM
Sbjct: 415 GTKSTVPERAHELWAT-AGSPAEHVEIRVVERGSSDGPHPASPASAGTVGEVETRGPHVM 473
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDD-GGNVWLVGRRNGRIKSGGENVYPEEVEAV 348
YW++ + WL TGD+G +D+ G + +VGR IK+GGE V+ EVE+V
Sbjct: 474 KGYWNRPDLTSEAIRPDGWLRTGDLGRLDETSGRLMIVGRAKDVIKTGGEKVHSSEVESV 533
Query: 349 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES--NCDQSSKNKELLLSSEVLR 406
LL+H + G+ + RL E V A V L ++ Q + CD++ VL
Sbjct: 534 LLRHVWVAEAAAYGVDDERLGEKVAASVVLDDAAQDDDGPITCDRARA---------VLD 584
Query: 407 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+ C +L+ +K PR + P S GK+ R +R
Sbjct: 585 RFC-GLHLSPYKRPRQIHVV-PALPRNSAGKVLRHMLR 620
>gi|254488273|ref|ZP_05101478.1| acyl-CoA synthase [Roseobacter sp. GAI101]
gi|214045142|gb|EEB85780.1| acyl-CoA synthase [Roseobacter sp. GAI101]
Length = 534
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 184/390 (47%), Gaps = 40/390 (10%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
+ +I+ +TSGTTG PKGV++SHS +V + + GY +DDV L + PL H+G S
Sbjct: 168 DDTMILFYTSGTTGQPKGVMLSHSNFLVNATGSGHLYGYRQDDVLLLSGPLFHLGTGSRV 227
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G V PKFE L +E +T++ VP ++ + R + S++
Sbjct: 228 FTALAYGTTMVVQPKFEVVDTLRMIEAQKITTMTMVPTMLNMVMNHPRFPEF--DFSSIR 285
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G +P LM+ A + P YG+TETS L+ LE +P G
Sbjct: 286 VLTYGASPMPVTLMERAIAAIPGITFCQGYGLTETSPVLS-------VLEPADHIP---G 335
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 299
N + + VG+P + +L++ + V G I+ RG VM YW++
Sbjct: 336 NPMLDKLS-----TVGRPILYSDLRIVDADDNPVPTGTPGEIVVRGPQVMNGYWNRPQET 390
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
G + TGD G +D G + + GR I SGGENVYP E E L +HP +
Sbjct: 391 AHAMRGG-FFHTGDAGVMDADGYLTIAGRTKEMIISGGENVYPIETENALSKHPAVAQAA 449
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V G+ +A+ EMV A V L + SE L CRE+ + +KA
Sbjct: 450 VFGVPHAKWGEMVYAAVALHDGKPASEDE----------------LIAFCRER-IAHYKA 492
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMS 449
PR +W+ P PL++T K+ + ++ +V++
Sbjct: 493 PRGMTIWQGPLPLSATNKLDKMTIKAQVLA 522
>gi|408375511|ref|ZP_11173177.1| long-chain-fatty-acid-CoA ligase [Alcanivorax hongdengensis A-11-3]
gi|407764638|gb|EKF73109.1| long-chain-fatty-acid-CoA ligase [Alcanivorax hongdengensis A-11-3]
Length = 516
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 188/385 (48%), Gaps = 53/385 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG KGV++SH L+ +L +A +GY D +Y+H P+ H+ ++S A+ +
Sbjct: 163 LFYTGGTTGRSKGVMLSHDNLVFNALNVVAEMGYDSDTIYMHAGPMFHLADMASTFAVTL 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
H +P+F+ L +EQ VT+ + VP ++ LA+ R+ S+K++L G
Sbjct: 223 AAGTHGIVPRFDVDEVLAFIEQEKVTNTLLVPTMVNLLASSGRIAN--YDVSSIKRMLYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG--QLPQAFGNVT 247
+P ++ A P YG TE S +T + P PG +L A
Sbjct: 281 ASPMPEAVLISAMEQMPTVSFAQGYGQTEASPIITSL---GPEHHIPGGEKLRSA----- 332
Query: 248 PNSVHQPQGVCVGKPAPHVEL-------KVCSDGSSHVGRILTRGAHVMLRYWD-QFLAK 299
G+ A VE+ +V S G+ VG I RG +VML YW +
Sbjct: 333 ------------GRAALGVEVVVLDENDQVVSQGT--VGEICARGPNVMLGYWGMESTTA 378
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
++ G WL TGD+G +D+ G V++V R + SGGEN++ EVE + HP +
Sbjct: 379 DTLRNG--WLHTGDLGYMDEDGFVFIVDRAKDMVISGGENIFSVEVEGAIYSHPEVQECA 436
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+GI + R E V A V LRE SE +E++ +HCRE+ + G+K
Sbjct: 437 VIGIPDERWGEAVHAIVVLREGEHASE---------------AEII-EHCRER-IAGYKV 479
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVR 444
PR + P++ GK+ ++E+R
Sbjct: 480 PRSVDFKAESLPVSGAGKVLKNELR 504
>gi|110833045|ref|YP_691904.1| long-chain-fatty-acid-CoA ligase [Alcanivorax borkumensis SK2]
gi|110646156|emb|CAL15632.1| long-chain-fatty-acid-CoA ligase, putative [Alcanivorax borkumensis
SK2]
Length = 516
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 184/383 (48%), Gaps = 49/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG KGV++SH L+ +L +A +GYG D VY+H AP+ H+ ++S A+ +
Sbjct: 163 LFYTGGTTGRSKGVMLSHDNLVFNALNVVAEMGYGRDTVYMHAAPMFHLADMASTFAVTL 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
H +P+F+ L +E+ +T + VP ++ LA+ R+ S++++L G
Sbjct: 223 AAGTHGIVPRFDVDEVLAFIEREKITDALLVPTMVNLLASSGRIAN--YDVSSIRRMLYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG--QLPQAFGNVT 247
+P ++ A PKA YG TE S +T + P G +L A
Sbjct: 281 ASPMPEAVLISAMEQMPKASFAQGYGQTEASPIITTLA---PEFHVAGGEKLRSA----- 332
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWD-QFLAKPS 301
G+ A VE+ V ++ VG I RG +VM YW + + +
Sbjct: 333 ------------GRAALGVEVMVVNENDEEVPRGTVGEICVRGGNVMRGYWGMESTTEET 380
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ G WL TGD+ +D+ G V++V R + SGGEN++ EVE + H + V+
Sbjct: 381 LRNG--WLHTGDLAYMDEDGFVFIVDRAKDMVISGGENIFSVEVEGAIYSHSAVQECAVI 438
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI + + E V A V L E SE++ + HCREK + G+K PR
Sbjct: 439 GIPDEKWGESVHAIVVLCEGSSASETD----------------IIDHCREK-IAGYKVPR 481
Query: 422 LFVLWRKPFPLTSTGKIRRDEVR 444
+P P++ GK+ ++E+R
Sbjct: 482 SIEFRSEPLPISGAGKVLKNELR 504
>gi|215686893|dbj|BAG89743.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 283
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 125/179 (69%), Gaps = 10/179 (5%)
Query: 1 MLVTDESSDSWYLELQHT-AIPSLRWHVSLG-----SSSSDFVNKRDMLTADILKGYSLR 54
+ + D S SW L L+ + ++ S+ ++ LG S +++FV+ + G + R
Sbjct: 106 VFIFDGSYSSWALRLKESNSLTSVNLYLFLGNLCSISQAANFVSVVSVEQIKRSSGGTTR 165
Query: 55 SL-PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA 113
++ P + AP +ICFTSGTTG PKGV ISH++LI+QSLAKIAIVGYGEDD+YLHTA
Sbjct: 166 AVEPVS---APNDVALICFTSGTTGRPKGVAISHTSLIIQSLAKIAIVGYGEDDIYLHTA 222
Query: 114 PLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR 172
PLCHIGG+SS +A+LM G CHV IPKF+ KSA +A+ +H VTS ITVPAIMADL + R
Sbjct: 223 PLCHIGGISSCLAILMAGGCHVLIPKFDVKSAFDAILEHRVTSFITVPAIMADLLSYAR 281
>gi|297171535|gb|ADI22533.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [uncultured
Oceanospirillales bacterium HF0500_09M11]
gi|297182289|gb|ADI18458.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [uncultured
Oceanospirillales bacterium HF4000_13G19]
Length = 516
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 183/377 (48%), Gaps = 37/377 (9%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG KGV++SH L+ +L + + YG +Y+H AP+ H+ ++S A+ +
Sbjct: 163 LFYTGGTTGRSKGVMLSHDNLVFNALNVVPEMDYGSGTIYMHAAPMFHLADMASTFAVTL 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G H +P+F+ L +E+ VT + VP ++ L + R+K+ SVK++L G
Sbjct: 223 AGGTHGIVPRFDVDDVLSFIERERVTHALLVPTMINLLVSSGRIKEF--DVSSVKRMLYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+P ++ A P A YG TE S +T + P PG G+ +
Sbjct: 281 ASAMPESVLISAMKQMPDALFAQGYGQTEASPIITALP---PDFHVPG------GDKLRS 331
Query: 250 SVHQPQGVCVG-KPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWD-QFLAKPSVSTGEV 307
+ GV V +E C VG I RG +VML YW + + ++ G
Sbjct: 332 AGRAALGVEVAIFDKDDIERPRC-----EVGEICARGPNVMLGYWGMEEASAEALRNG-- 384
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
WL TGD+G +D+ G V++V R I SGGEN++ EVE+ + HP + VVGI +
Sbjct: 385 WLHTGDLGYMDEDGFVFIVDRVKDMIISGGENIFSVEVESAIYSHPAVQECAVVGIPHDE 444
Query: 368 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 427
E V A V R+ +L+ + L HCRE + G+K PR
Sbjct: 445 WVETVHAIVVPRQGH----------------VLTEDELLSHCREL-IAGYKLPRSIEFRS 487
Query: 428 KPFPLTSTGKIRRDEVR 444
+P P++ GKI ++E+R
Sbjct: 488 EPLPVSGAGKILKNELR 504
>gi|304311374|ref|YP_003810972.1| AMP-dependent synthetase/ligase [gamma proteobacterium HdN1]
gi|301797107|emb|CBL45323.1| AMP-dependent synthetase and ligase [gamma proteobacterium HdN1]
Length = 516
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 184/384 (47%), Gaps = 49/384 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG KGV++SH L+ +L + +GYG D +Y+H AP+ H+ ++S A+ +
Sbjct: 163 LFYTGGTTGRSKGVMLSHDNLVFNALNVVPEMGYGTDSIYMHAAPMFHLADMASTFAVTL 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G H +P+F+ L +E+ +T + VP ++ L + ++K SVK++L G
Sbjct: 223 AGGSHGIVPRFDVADVLSFMEREKITHTLLVPTMINLLVSSGKIKDF--DVSSVKRMLYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLT-----FMTLYDPTLETPGQ--LPQA 242
+P ++ A P A YG TE S +T F + L + G+ L
Sbjct: 281 ASPMPEAVLVSAMEQMPDALFAQGYGQTEASPIITALGPEFHVVGGAKLRSAGRAALGVE 340
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKP-S 301
+ + V P+G VG I RG +VML YW A +
Sbjct: 341 VAIMDKDDVELPRG--------------------EVGEICARGPNVMLGYWGMEQASAET 380
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ +G WL TGD+G +D+ G V++V R I SGGEN++ EVE + HP + VV
Sbjct: 381 LRSG--WLHTGDLGYMDEDGFVFIVDRAKDMIISGGENIFSVEVEGAIYSHPSVRECAVV 438
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI + EMV A V L+E +E ELL HCR + G+K PR
Sbjct: 439 GIPHDEWGEMVHAIVVLKEGHGLNEG---------ELL-------AHCRAL-IAGYKLPR 481
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRR 445
+P P++ GKI ++E+R+
Sbjct: 482 SIEFRSEPLPVSGAGKILKNELRK 505
>gi|398866041|ref|ZP_10621544.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
gi|398241940|gb|EJN27576.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
Length = 522
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 181/385 (47%), Gaps = 45/385 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV+IS L +LA ++ YG + +LH P+ H+ AML+
Sbjct: 163 IFYTGGTTGFPKGVMISQDNLAFAALASLSKGFYGSESKFLHAMPMFHLADFGGMSAMLI 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKIL 187
G HV +P F ++ALE + Q VT + P ++ + K D ++K I+
Sbjct: 223 CGGTHVVLPAFSGEAALELISQEGVTDAMLAPTMIQMMLDARDAKPALNALDLSAIKNII 282
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G + L+ A +F A+ YGMTE ++ T + + E
Sbjct: 283 YGASPISPVLLNRACEAFTTARFFQGYGMTELTTGGTMLDAQYHSAE------------- 329
Query: 248 PNSVHQPQG--VCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKP 300
HQ G G+ VEL++ D VG I+ RG +VML YW+ A
Sbjct: 330 ----HQASGKMYSAGRAISCVELRIVDDEDREVPRGTVGEIVVRGPNVMLGYWNNPDATA 385
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
V + W+ TGD +D+ G V++V R I SGGEN+Y EVE L HP + V
Sbjct: 386 QV-LKDGWMHTGDGAYMDEEGFVYIVDRLKDMIVSGGENIYSAEVENALASHPAVAQSAV 444
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+GI + E V A + L+ + +++ E + HCR + + G+K P
Sbjct: 445 IGIPCEKWGETVHAVIVLK----------------PQAVVTEEEIVAHCRAR-IAGYKCP 487
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRR 445
R V +R+ PL++ GKI ++E+R+
Sbjct: 488 R-SVEFRQAMPLSTVGKILKNELRQ 511
>gi|412992139|emb|CCO19852.1| AMP-dependent synthetase and ligase [Bathycoccus prasinos]
Length = 783
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 207/430 (48%), Gaps = 59/430 (13%)
Query: 70 ICFTSGTTG-SPKGVVISHSALIVQSLAKIAIVG---YGEDDVYLHTAPLCHIGGLSSAM 125
+ FTSGT+G +PK ++SHS L +K+ Y +DVYLH APL H+GGL S +
Sbjct: 354 LVFTSGTSGFAPKAAILSHSNLAAAIDSKLYDENGPQYDSEDVYLHCAPLYHVGGLISGL 413
Query: 126 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR------------- 172
A + A HVF+ F+++S L+A+ VT+ I VP ++ L + +
Sbjct: 414 AAIKADARHVFLESFDARSFLQAIVTAEVTAFIAVPTMLRKLERMCKDAHLIPRPTTISS 473
Query: 173 -VKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 231
V+ +SVKKIL GGG + + + A FP AK+IS YGMTE +SS+ + L D
Sbjct: 474 TVQSNPSTFNSVKKILVGGGPMHEKDVAFARKIFPNAKIISTYGMTEATSSIAYADLTDI 533
Query: 232 TL-----ETPGQLPQAFGN---VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILT 283
+ T + G+ VT NS V GK + +K+ D IL
Sbjct: 534 EMTPLGSRTASASDMSLGDNWVVTANS-----NVNQGKIIEGLSVKI--DRLGQENEILI 586
Query: 284 RGAHVMLRYWDQFLAK----PSVSTGEVWLDTGDIGSI-DDGGNVWLVGRRNGRIKSGGE 338
RG V Y++ +A + TGDIG + D V ++GR + IK+GGE
Sbjct: 587 RGETVSKGYYNTPVAHSLHVDDKYNNNGYFRTGDIGEVSKDSNTVRILGRLSNAIKTGGE 646
Query: 339 NVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR---------------ESWQ 383
NV EVE V+ +H + VV G+ + E+V VRL+ ++W+
Sbjct: 647 NVSCLEVEQVVEKHELVQESVVYGVPDDVWGEIVTCAVRLKPDVEWAQPTENLNNPDAWE 706
Query: 384 WSESNCDQSSKNKELLLSS------EVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 437
+ + + + + LSS E+LR C +K L FK P+ +V+ FP S GK
Sbjct: 707 FMKYAEEHMDDHMDGQLSSLKKVNGEMLRHWCLKKQLARFKVPKQWVVVENEFPRNSGGK 766
Query: 438 IRRDEVRREV 447
I ++RRE+
Sbjct: 767 IDLSQLRREI 776
>gi|374367482|ref|ZP_09625545.1| AMP-dependent synthetase and ligase [Cupriavidus basilensis OR16]
gi|373101008|gb|EHP42066.1| AMP-dependent synthetase and ligase [Cupriavidus basilensis OR16]
Length = 468
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 188/384 (48%), Gaps = 42/384 (10%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV++SH+ L + ++A++ G D +LH P+ H+ ++ A+ +
Sbjct: 108 IFYTGGTTGFPKGVMLSHNNLGISAMAQLMTGRCGADAAFLHAMPMFHLANFAAVCALFI 167
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR---DSVKKI 186
G HV IP F + LEA+ + VT + P ++ L ++ R S+K I
Sbjct: 168 SGGTHVVIPAFTPLATLEAISRDRVTQITLAPTMLQMLLDWLKQHPGEAARLDMSSLKLI 227
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
G + L+++A +FP+ YGMTE + T+ P T +AF +
Sbjct: 228 GYGASPISQTLLRQAQQTFPETDFAQGYGMTELAP---LATVLGPEYHT----EEAFASG 280
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPS 301
+ GKP VE+K+ + VG I RG +VML YW+Q A
Sbjct: 281 KMRA--------AGKPHLCVEVKIVDEFDREVPRGTVGEIAVRGGNVMLGYWNQPEATAQ 332
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
G W+ TGD G +D+ G +++V R I SGGEN+Y EVE + P + V+
Sbjct: 333 AVRGG-WMHTGDGGYMDEEGLIYVVDRIKDMIVSGGENIYSAEVENAIASQPAVGQCAVI 391
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E V A + L++ + ++E ++ HCR K + G+K PR
Sbjct: 392 GVPSEKWGETVHAVIVLKQG----------------AIATAEEIQAHCR-KRIAGYKCPR 434
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRR 445
V +R+ PL+S GKI ++++R+
Sbjct: 435 -SVEFREALPLSSVGKILKNDLRK 457
>gi|397587792|gb|EJK54032.1| hypothetical protein THAOC_26417 [Thalassiosira oceanica]
Length = 611
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 216/426 (50%), Gaps = 45/426 (10%)
Query: 45 ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP---KGVVISHSALIVQSLAKI-AI 100
+++++G + R + S + E AVI+ FTSGT+ SP KGV +SH +L VQ+LAK +
Sbjct: 201 SEVVEGATSREV----SLSNEDAVIL-FTSGTS-SPRGAKGVRLSHRSLYVQALAKTQSP 254
Query: 101 VGYG-EDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK----FESKSALEAVEQ---- 151
Y V T PL H+GGLSSA+ +++ G +F P F+ S L+++
Sbjct: 255 CQYDTHTKVVATTVPLFHVGGLSSALGVMLGGGSLMFPPATGKGFQPSSILKSIADDEST 314
Query: 152 HCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI 211
+L+ VPA++ A + K+ +V+ IL GG + + FP A+++
Sbjct: 315 RSANTLVVVPAMLH--ALIEYTKQQSPVFPNVRLILVGGQSIAGNVYINTRRMFPNARIV 372
Query: 212 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC 271
Y TE SS+TF L T + G P PN+ CVG P H+++++
Sbjct: 373 QTYACTEAGSSITFEDLGFATNGSSGGTP-------PNNNSVSGTSCVGYPPIHIQVEIF 425
Query: 272 SDGSSHV-------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID-DGGNV 323
S H+ G I TRG H M YW + + + W+ T D+G D G +
Sbjct: 426 DQKSRHMPLRNGEMGIIGTRGPHTMSGYWSRGENNATFLSEADWMLTNDLGMKDPQSGKL 485
Query: 324 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 383
+ GR N I++GGE+V +VEA+L+QH II V + + + E V A + L+ Q
Sbjct: 486 YFCGRANDVIRTGGESVLANDVEAILMQHDDIIECAVFALPDEQFGECVCAALVLK---Q 542
Query: 384 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 443
+ S + +S +LL + +R+HC +L+GFK PR L+ P S+GKI + E+
Sbjct: 543 GTRSEMEDAS---DLL---QRIRKHCSRHHLSGFKRPRKVFLFTPALPRNSSGKILKHEI 596
Query: 444 RREVMS 449
+R+ ++
Sbjct: 597 QRKTLA 602
>gi|407695875|ref|YP_006820663.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407253213|gb|AFT70320.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 516
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 181/384 (47%), Gaps = 51/384 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG KGV++SH L+ +L + + Y +Y+H AP+ H+ ++S A+ +
Sbjct: 163 LFYTGGTTGRSKGVMLSHDNLVFNALNVVPEMDYASGTIYMHAAPMFHLADMASTFAVTL 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G H +P+F+ L +E+ VT + VP ++ L + ++K+ SVK++L G
Sbjct: 223 AGGTHGIVPRFDVDDVLSFIERERVTHALLVPTMINLLVSSGKIKEF--DVSSVKRMLYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+P ++ A P A YG TE S +T + P
Sbjct: 281 ASAMPESVLISAMKQMPDALFAQGYGQTEASPIITAL---------------------PP 319
Query: 250 SVHQPQG---VCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWD-QFLAKP 300
H P G G+ A VE+ + + VG I RG +VML YW + +
Sbjct: 320 DFHVPGGDKLRSAGRAALGVEVAIFDKDDTERPRCEVGEICARGPNVMLGYWGMEEASAE 379
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
++ G WL TGD+G +D+ G V++V R I SGGEN++ EVE+ + HP + V
Sbjct: 380 ALRNG--WLHTGDLGYMDEDGFVFIVDRVKDMIISGGENIFSVEVESAIYSHPAVQECAV 437
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VGI + E V A V R+ +L+ E L HCRE + G+K P
Sbjct: 438 VGIPHDEWVETVHAIVVPRQGH----------------VLTEEELLSHCREL-IAGYKLP 480
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVR 444
R +P P++ GKI ++E+R
Sbjct: 481 RSIEFRSEPLPISGAGKILKNELR 504
>gi|443671029|ref|ZP_21136150.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
gi|443416419|emb|CCQ14487.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
Length = 515
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 188/388 (48%), Gaps = 61/388 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD--VYLHTAPLCHIGGLSSAMAM 127
+ +T GTTG PKGV++SH+ L+ L +A G DD V LH AP+ H+ L++ +
Sbjct: 163 LFYTGGTTGFPKGVMLSHANLVTSGLGTVA-TGQLLDDASVLLHAAPMFHLADLAAWVGQ 221
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPA---IMADLATLIRVKKTWKGRDSVK 184
+M+G HV +P FE + L A+ H VT ++ VP ++ D TL + S+
Sbjct: 222 VMLGGTHVMVPFFEPTAVLGAIAAHAVTDVLLVPTMIQLLVDHPTLSEFDTS-----SLS 276
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
++L GG + + +++ P+A+L AYGMTE + + + E G
Sbjct: 277 RVLYGGSPISAGVLERTLARLPQARLTQAYGMTELAPVASLLWPEHHVGERIGS------ 330
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCS-DG----SSHVGRILTRGAHVMLRYWDQFLAK 299
G+ APH E+++ DG + VG I RG HVML YW+ K
Sbjct: 331 --------------AGRAAPHSEIRIVGPDGKQLTTGSVGEICVRGGHVMLGYWN----K 372
Query: 300 PSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
P + V W+ TGD+G +D G +++V R I +GGENVY EVE L HP ++
Sbjct: 373 PEETAAAVRDGWMHTGDVGYLDADGFLFVVDRLKDMIITGGENVYSAEVECALSLHPAVL 432
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
V+G+ + E V ACV L E + D+ LR+H R + G
Sbjct: 433 ACAVIGVPDGEWGERVHACVVLAEGF---PPMVDE-------------LREHTRTL-VAG 475
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+K PR + + P++ GKI + E+R
Sbjct: 476 YKTPRT-IEFVTALPMSGAGKILKRELR 502
>gi|326384443|ref|ZP_08206123.1| AMP-dependent synthetase and ligase [Gordonia neofelifaecis NRRL
B-59395]
gi|326196788|gb|EGD53982.1| AMP-dependent synthetase and ligase [Gordonia neofelifaecis NRRL
B-59395]
Length = 505
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 197/409 (48%), Gaps = 66/409 (16%)
Query: 53 LRSLPF--THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYL 110
L + PF H +P+ ++ +TSGTTG PKG ++H L + + G DDV +
Sbjct: 146 LEAEPFGDLHPASPDDTAVLLYTSGTTGRPKGAELTHFQLYMNCTVAPELFGLRADDVAI 205
Query: 111 HTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT 169
PL H+ GLSS + A + G +P+F++++AL+ +E+ VT VP + LA
Sbjct: 206 GVLPLFHVFGLSSVLNAAVRWGGSVALLPRFDAQAALDVIERRRVTVFSGVPTMYVALA- 264
Query: 170 LIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT 227
+ GRD S++ ++GG +P E+++ FP ++ YG++ET+S+ TF
Sbjct: 265 ----EADTSGRDLSSLRTAISGGASIPGEVIRAVEAKFPGVVVLEGYGLSETASTSTF-- 318
Query: 228 LYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC-------SDGSSHVGR 280
N+ S + + + +GKP VE+ V + G VG+
Sbjct: 319 -----------------NI---SATERKVLSIGKPVWGVEMAVLDGDGTPMAAGPDQVGQ 358
Query: 281 ILTRGAHVMLRYWDQFLAKPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSG 336
++ RG +VM Y+ K +T E WL TGD+G D+ G ++V R I G
Sbjct: 359 LVVRGHNVMKGYY-----KRPDATAEALRNGWLHTGDLGYRDEDGYYFVVDRLKDLIVRG 413
Query: 337 GENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 396
G NVYP E+E VL HP ++ V+G+ + RL E VVA V LR + S
Sbjct: 414 GYNVYPREIEEVLYTHPEVVEAAVIGVPDDRLGEEVVAYVALR---------AEASVTPD 464
Query: 397 ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
EL+ S ++ L +K PR V P +TGKI + E+RR
Sbjct: 465 ELIAFS--------KEQLAAYKYPRA-VEIVDALPKGATGKILKRELRR 504
>gi|421745630|ref|ZP_16183477.1| AMP-dependent synthetase and ligase [Cupriavidus necator HPC(L)]
gi|409775909|gb|EKN57351.1| AMP-dependent synthetase and ligase [Cupriavidus necator HPC(L)]
Length = 519
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 189/382 (49%), Gaps = 34/382 (8%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG KGV++SH+ S+A+ A + D V L APL H+ GL + L+
Sbjct: 157 ILYTGGTTGRAKGVMLSHANFWAASIARAAELNNAPDSVSLLVAPLFHVAGLGRLIGQLI 216
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G V +P+F + L A+E H ++ +I VP ++ L L S+ +I G
Sbjct: 217 AGGSCVTLPQFRADILLSAIETHRISDIIVVPTMLQSL--LDHPGFDAARLQSLNRIAFG 274
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+P +L+ A ++P A+ AYGMTET++++ P A N P
Sbjct: 275 AAPMPPDLLARALEAWPNAEFFQAYGMTETAAAVCIN-------------PPA--NHRPG 319
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVST 304
+ + VG+ E++V + VG I+ RG VM YW+Q A + +
Sbjct: 320 AGAERHRHSVGRAGLGAEIRVIDPQGNEVPRGTVGEIVVRGPMVMRGYWNQPDAT-AQAL 378
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
+ WL TGD G +D+ G +++ R I SGGEN+Y EVE L HP + V+G+
Sbjct: 379 RDGWLHTGDGGWMDEDGYLFIADRLKDMIISGGENIYSAEVETALRGHPRVAQAAVIGVP 438
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+AR E V A V + +S + + + LS E L Q CRE+ L G+K PR F
Sbjct: 439 DARWGERVHAVVVVEDSASLAPPD--------DAALSDE-LTQWCRER-LAGYKCPRSFA 488
Query: 425 LWRKPFPLTSTGKIRRDEVRRE 446
+ PL++ GK+ ++E+R+
Sbjct: 489 -YVDGLPLSAAGKVLKNELRQR 509
>gi|375101721|ref|ZP_09747984.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora cyanea NA-134]
gi|374662453|gb|EHR62331.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora cyanea NA-134]
Length = 507
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 190/396 (47%), Gaps = 67/396 (16%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY--GEDDVYLHTAPLCHIGGLSSAMAM 127
+ +T GTTG+PKGV +SH+ ++ +L +A G+ +LH AP+ H+G L+ +
Sbjct: 163 LFYTGGTTGAPKGVALSHAGMLTSALGCVA-TGFMTTPGGRFLHAAPMFHLGDLAHWVMQ 221
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-----S 182
+ G V IP F+ + L A+ +H VT L VP T++R+ D
Sbjct: 222 SLTGNTQVTIPAFDPAALLAALPEHGVTDLFLVP-------TMLRIVLDHPDFDPAAFAG 274
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
+++++ +P+EL+ A+ FP +L+ AYGMTE S ++T +
Sbjct: 275 LRRLVYAAAPMPAELLDRASELFPHVELVQAYGMTELSPAITLLG--------------- 319
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFL 297
P+ P G+ APH E++V + DG VG I+TRG H+ML YW
Sbjct: 320 -----PSDHAGPHRYSAGRAAPHSEVRVVAPDGGEVPRGTVGEIVTRGGHLMLGYW---- 370
Query: 298 AKPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
KP + T EV W+ TGD G +D+ G +++V R I +GGENVY EVE VL +HP
Sbjct: 371 GKPEL-TAEVVRDGWMHTGDAGYLDEAGYLYVVDRIKDMIITGGENVYSAEVENVLHEHP 429
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
+ V+G+ + R E V A V D+ E L H R +
Sbjct: 430 LVATCAVIGLPDDRYGERVHAVV---------VPAGDRHPDPAE-------LDAHVRAR- 472
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 449
L +K PR + + PL+ GK+ + E+R S
Sbjct: 473 LANYKVPRGYDFVDE-LPLSGAGKVLKHELRSRFRS 507
>gi|302528169|ref|ZP_07280511.1| O-succinylbenzoate-CoA ligase [Streptomyces sp. AA4]
gi|302437064|gb|EFL08880.1| O-succinylbenzoate-CoA ligase [Streptomyces sp. AA4]
Length = 501
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 187/391 (47%), Gaps = 62/391 (15%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
+P+ +I +TSGTTG PKG ++H L + + G +DV L PL H+ GLS
Sbjct: 157 SPDDTAVILYTSGTTGRPKGAELTHFQLFMNCTVSGELFGATAEDVSLAVLPLFHVFGLS 216
Query: 123 SAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
S + M G V +PKF++ + L+ +E+H T VP + L +++ GRD
Sbjct: 217 SVLNVMTRFGGSLVLVPKFDAAAVLDEMERHRCTLFSGVPTMYVAL-----LQQDLAGRD 271
Query: 182 --SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
S++ ++GG +P E+++ F ++ YG++ET+S TF
Sbjct: 272 LSSLRSAVSGGASMPGEVLRAFEKKFDGVVVLEGYGLSETASGTTF-------------- 317
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-------GSSHVGRILTRGAHVMLRY 292
N+ S Q + + +GKP VE+KV G VG I+ RG +VM Y
Sbjct: 318 -----NI---SAEQRKVLSIGKPIWGVEVKVVDRAGTELGAGPDQVGEIVVRGHNVMKGY 369
Query: 293 WDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
+ +P + + W TGD+G D+ G ++V R + GG NVYP E+E VL
Sbjct: 370 Y----GRPDATAEAIRDGWFHTGDLGYRDEEGYYFVVDRLKDLVIRGGYNVYPREIEEVL 425
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
+HPG+ VVG + RL E VVA V LR S+++ D+ L +HC
Sbjct: 426 YEHPGVAEAAVVGEPHERLGEEVVAYVVLRAG---SDASVDE-------------LAEHC 469
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 440
+ + L +K PR L + P TGKI +
Sbjct: 470 KGR-LAAYKYPRTITLLDR-LPKGPTGKILK 498
>gi|453363960|dbj|GAC80275.1| putative long-chain-fatty-acid--CoA ligase [Gordonia malaquae NBRC
108250]
Length = 505
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 194/407 (47%), Gaps = 64/407 (15%)
Query: 53 LRSLPFT--HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYL 110
L + PF H + + ++ +TSGTTG PKG ++H L + + G DV +
Sbjct: 146 LDAPPFDDLHPTSADDTAVLLYTSGTTGRPKGAELTHYQLYMNCTVAPELFGMSASDVSI 205
Query: 111 HTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT 169
PL H+ GLSS + A GA +P+F++ + ++ +E+ T VP + LA
Sbjct: 206 GVLPLFHVFGLSSVLNATTRWGASVALLPRFDATAVIDEIERRRATVFAGVPTMYVALA- 264
Query: 170 LIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT 227
+ GRD +++ ++GG +P E++K F ++ YG++ET+S+ TF
Sbjct: 265 ----EADATGRDLSTLRAAVSGGASIPGEVIKAVEAKFTGLVVLEGYGLSETASTTTF-- 318
Query: 228 LYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-------GSSHVGR 280
NV S + + + +GKP VE+KV D G+ +VG+
Sbjct: 319 -----------------NV---SATERKVLSIGKPVWGVEMKVIDDEGNALSAGTDNVGQ 358
Query: 281 ILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGG 337
+L RG ++M Y+ +P + + WL TGD+G DD G ++V R I GG
Sbjct: 359 LLVRGHNIMKGYY----KRPDATADALRNGWLHTGDLGYRDDEGYYFVVDRLKDMIVRGG 414
Query: 338 ENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKE 397
NVYP E+E VL HP ++ V+G + RL E VVA V +R+ SE++ +K +
Sbjct: 415 YNVYPREIEEVLYSHPDVVEAAVIGTPDDRLGEEVVAYVAVRDGADLSEADVITFAKEQ- 473
Query: 398 LLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
L +K PR V++ P +TGKI + E+R
Sbjct: 474 ----------------LAAYKYPR-SVVFVAELPKGATGKILKRELR 503
>gi|399988370|ref|YP_006568720.1| AMP-dependent synthetase and ligase [Mycobacterium smegmatis str.
MC2 155]
gi|399232932|gb|AFP40425.1| AMP-dependent synthetase and ligase [Mycobacterium smegmatis str.
MC2 155]
Length = 518
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 186/385 (48%), Gaps = 54/385 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLSSAMAML 128
+ +T GTTG PKGV++SH+ L+ + + + + LH AP+ H+ L S A L
Sbjct: 163 LFYTGGTTGFPKGVMLSHANLLTSTYGLLTPGFAFRPGGICLHAAPMFHLADLMSWSAGL 222
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ G HVFIP FE + ++A+ QH VT + VP ++ L + + S + +
Sbjct: 223 LQGGRHVFIPSFEPVTVMQAIAQHQVTDALLVPTMIQKLIDHPDINRY--DLTSFRALFY 280
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
+P L++ A FP A+ + YGMTE S T ++ P
Sbjct: 281 AASAIPQALLERAMKVFPNAEFVQGYGMTELSPLATLLS--------------------P 320
Query: 249 NSVHQPQGV-CVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
+ +P+ + G+ AP E+++ DG+ VG + RG +VML YW+ KP
Sbjct: 321 DDHQKPRLLRSAGRAAPSAEVRIVDPDGNEVPRRTVGEVAVRGGNVMLGYWN----KPQE 376
Query: 303 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ + W+ TGD +DD G +++V R I +GGENVY EVE ++QHP +
Sbjct: 377 TAAAIRDGWMHTGDAAYMDDDGYIYVVDRIKDMIITGGENVYSAEVENAVVQHPSVAACA 436
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+G+ +A E V A V L+ + L++ +R+H + + + G+K
Sbjct: 437 VIGVPDADWGERVHAVVVLQPGAE----------------LAACQIREHAK-RLIAGYKC 479
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVR 444
PR + + PL+ GK+ + E+R
Sbjct: 480 PR-SIEFVNALPLSGAGKVLKRELR 503
>gi|346421738|gb|AEO27382.1| AMP-dependent synthetase and ligase [Pseudomonas sp. 19-rlim]
Length = 514
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 183/391 (46%), Gaps = 49/391 (12%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
+I +T GTTG PKGV +SH A+ +L+ ++++ + +++ H SS +
Sbjct: 162 VIFYTGGTTGHPKGVAMSHRAIYFSALSYLSMLTHTRHLRHIYVPGFFHFAAASSVWYIT 221
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ G H+ +PKFE + ++ V QH T+ + VP ++ L T + S+K +
Sbjct: 222 LSGGTHIVLPKFEMHTFMQGVSQHRATNTVLVPTMINMLMTHPDFSQ--YDLSSLKTCIY 279
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
GG +P LM+ A P + YGMTET T + D T A GN
Sbjct: 280 GGSPMPEALMRRAIELLPDWQFRQIYGMTETGGFATMLHWEDHT---------ADGNRIK 330
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
++ G+PAP V L++ + V G I R +M D +L P +
Sbjct: 331 SA---------GQPAPGVSLRIVDSTGAPVAANVLGEICIRSTALM----DGYLHSPDST 377
Query: 304 TG---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+ W+ TGD G +D+ G +++ R I SGGENVY EVE VL HP + V
Sbjct: 378 QAVLHDGWMHTGDAGYLDEQGFLFVADRYKDMIVSGGENVYSVEVERVLYLHPAVQEAAV 437
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ + + E V A V LR+ Q +++ L Q CRE ++ G+K P
Sbjct: 438 IGVPHQQWGESVHALVVLRQGAQ----------------ATAQELMQFCRE-HIAGYKVP 480
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
R +P P T GKIR++ +R + +S L
Sbjct: 481 RSIDFQDQPLPTTPVGKIRKNVIRDQYLSRL 511
>gi|256392289|ref|YP_003113853.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
gi|256358515|gb|ACU72012.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
Length = 550
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 187/398 (46%), Gaps = 49/398 (12%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ + I +TSGTTG PKG +SH ++ + G+ +D PL H G+
Sbjct: 189 PDDPMDIQYTSGTTGFPKGATLSHRNVLGNGYMVAEVQGWTHEDRVCLPVPLYHCFGMVM 248
Query: 124 A-MAMLMVGACHVFI-PKFESKSALEAV-EQHCVTSLITVPAI-MADLATLIRVKKTWKG 179
+ G+C V P F+ L AV E+HC T L VP + +A+LA L + T+
Sbjct: 249 GNLGATSHGSCMVLPGPLFDPADTLRAVSEEHC-TVLYGVPTMFIAELALLEKTPDTYD- 306
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
S++ + G P E+MK A + AYGMTETS ++ T D +LE
Sbjct: 307 LSSLRTGVMAGSPCPVEVMKRVIGEMGMADVTIAYGMTETSP-VSTQTRRDDSLER---- 361
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYW 293
+ VG+ PHVE+K+ G+ G + TRG VML YW
Sbjct: 362 ---------------RVATVGRVHPHVEIKIVDPDTGATLGADEPGELCTRGYSVMLGYW 406
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
D+ G+ W+ TGD+ +D G V +VGR + GGENVYP EVE L HP
Sbjct: 407 DEPQRTAEAVDGDGWMHTGDLAQMDADGYVAIVGRIKDMVIRGGENVYPREVEEFLYSHP 466
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
+ + V+G+ + + E ++A VRLR Q L+ E +R C E
Sbjct: 467 DVEDVQVIGVPDQKYGEELMAWVRLRPGAQ---------------PLTPEAVRTFC-EGR 510
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
L +K PR +V FP+T TGK+R+ E+R + M L
Sbjct: 511 LAHYKIPR-YVHIVDGFPMTVTGKVRKVEMREQAMEIL 547
>gi|441211311|ref|ZP_20975027.1| feruloyl-CoA synthetase [Mycobacterium smegmatis MKD8]
gi|440626558|gb|ELQ88388.1| feruloyl-CoA synthetase [Mycobacterium smegmatis MKD8]
Length = 518
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 186/385 (48%), Gaps = 54/385 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLSSAMAML 128
+ +T GTTG PKGV++SH+ L+ + + + + LH AP+ H+ L S A L
Sbjct: 163 LFYTGGTTGFPKGVMLSHANLLTSTYGLLTPGFAFRPGGICLHAAPMFHLADLMSWSAGL 222
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ G HVFIP FE + ++A+ QH VT + VP ++ L + + S + +
Sbjct: 223 LQGGRHVFIPSFEPVTVMQAIAQHQVTDALLVPTMIQKLIDHPDINRY--DLTSFRALFY 280
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
+P L++ A FP A+ + YGMTE S T ++ P
Sbjct: 281 AASAIPQALLERAMKVFPNAEFVQGYGMTELSPLATLLS--------------------P 320
Query: 249 NSVHQPQGV-CVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
+ +P+ + G+ AP E+++ DG+ VG + RG +VML YW+ KP
Sbjct: 321 DDHQKPRLLRSAGRAAPSAEVRIVDPDGNEVPRRTVGEVAVRGGNVMLGYWN----KPQE 376
Query: 303 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ + W+ TGD +DD G +++V R I +GGENVY EVE ++QHP +
Sbjct: 377 TAAAIRDGWMHTGDAAYMDDDGYIYVVDRIKDMIITGGENVYSAEVENAVVQHPSVAACA 436
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+G+ +A E V A V L+ + L++ +R+H + + + G+K
Sbjct: 437 VIGVPDADWGERVHAVVVLQPGAE----------------LAACQIREHAK-RLIAGYKC 479
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVR 444
PR + + PL+ GK+ + E+R
Sbjct: 480 PR-SIEFVNALPLSGAGKVLKRELR 503
>gi|118468421|ref|YP_888350.1| feruloyl-CoA synthetase [Mycobacterium smegmatis str. MC2 155]
gi|118169708|gb|ABK70604.1| feruloyl-CoA synthetase [Mycobacterium smegmatis str. MC2 155]
Length = 520
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 186/385 (48%), Gaps = 54/385 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLSSAMAML 128
+ +T GTTG PKGV++SH+ L+ + + + + LH AP+ H+ L S A L
Sbjct: 165 LFYTGGTTGFPKGVMLSHANLLTSTYGLLTPGFAFRPGGICLHAAPMFHLADLMSWSAGL 224
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ G HVFIP FE + ++A+ QH VT + VP ++ L + + S + +
Sbjct: 225 LQGGRHVFIPSFEPVTVMQAIAQHQVTDALLVPTMIQKLIDHPDINRY--DLTSFRALFY 282
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
+P L++ A FP A+ + YGMTE S T ++ P
Sbjct: 283 AASAIPQALLERAMKVFPNAEFVQGYGMTELSPLATLLS--------------------P 322
Query: 249 NSVHQPQGV-CVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
+ +P+ + G+ AP E+++ DG+ VG + RG +VML YW+ KP
Sbjct: 323 DDHQKPRLLRSAGRAAPSAEVRIVDPDGNEVPRRTVGEVAVRGGNVMLGYWN----KPQE 378
Query: 303 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ + W+ TGD +DD G +++V R I +GGENVY EVE ++QHP +
Sbjct: 379 TAAAIRDGWMHTGDAAYMDDDGYIYVVDRIKDMIITGGENVYSAEVENAVVQHPSVAACA 438
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+G+ +A E V A V L+ + L++ +R+H + + + G+K
Sbjct: 439 VIGVPDADWGERVHAVVVLQPGAE----------------LAACQIREHAK-RLIAGYKC 481
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVR 444
PR + + PL+ GK+ + E+R
Sbjct: 482 PR-SIEFVNALPLSGAGKVLKRELR 505
>gi|388566015|ref|ZP_10152492.1| long-chain-fatty-acid CoA ligase [Hydrogenophaga sp. PBC]
gi|388266745|gb|EIK92258.1| long-chain-fatty-acid CoA ligase [Hydrogenophaga sp. PBC]
Length = 517
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 187/389 (48%), Gaps = 59/389 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV++SH I S+ IA + + + Y+H+A L H+ G S A A+ +
Sbjct: 162 IYYTGGTTGHPKGVMLSHKNFIAASINWIATLHFSDQTRYMHSAGLFHLAGASPAFALTL 221
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPA---IMADLATLIRVKKTWKGRDSVKKI 186
G HV +PKF++ A EA++ H V ++ VP +M + R T SV+
Sbjct: 222 AGGTHVCLPKFDAVLAFEAIQTHQVNYVLFVPTMINMMLNHPDFDRYDLT-----SVRYC 276
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS---SLTFMTLYDPTLETPGQLPQAF 243
G +P ++ A + P + I YGMTET++ SL + +D
Sbjct: 277 EYGASPIPDAVLAAAIDKLPSWEFIQGYGMTETAALTVSLPWRYHFD------------- 323
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 298
G P+ H G+ A V++++ + G I RGA VML YW+
Sbjct: 324 GEHGPHKRH-----AAGRAAYGVDVRIVDPDGKELPRGTPGEIAVRGAQVMLGYWN---- 374
Query: 299 KPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
KP + + W+ TGD +D+ G + +V R I SGGEN+Y EVE + HP +
Sbjct: 375 KPEATAAAIRDGWMHTGDGAWMDEDGFITIVDRVKDMIISGGENIYSREVENAVHAHPAV 434
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
V+G+ + + E V+A V L++ QS +E++ HCR + +
Sbjct: 435 RECAVIGVPDEKWGEAVMAVVALKDG---------QSVSEQEII-------DHCR-RLIA 477
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+K PR V +R+ PL+ GKI ++ +R
Sbjct: 478 NYKCPRR-VEFREALPLSGAGKIMKNVLR 505
>gi|260904720|ref|ZP_05913042.1| AMP-binding domain protein [Brevibacterium linens BL2]
Length = 564
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/415 (32%), Positives = 193/415 (46%), Gaps = 48/415 (11%)
Query: 40 RDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA 99
RD+L K YS+R A + + I +TSGTTG PKGV +SH ++
Sbjct: 179 RDLLDDGAAK-YSVRLEKLAGELAMDDPINIQYTSGTTGFPKGVTLSHHNILNNGFFIGE 237
Query: 100 IVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSL 157
++ Y D + P H G+ +A L GA + P F+ +AL AV + TSL
Sbjct: 238 LLSYSAKDSVVLPVPYYHCFGMVIGNLAALSHGAAIILPSPGFDPGAALSAVSEEKATSL 297
Query: 158 ITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 217
VP + + L + S++ + G P E+MK + ++ YGMT
Sbjct: 298 YGVPTMF--IGELEHPDFSSYDLSSLRTGVMAGSPCPVEIMKRVISDMNMDEVAICYGMT 355
Query: 218 ETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH 277
ETS ++ MT D TLE Q VG+ PH+E+K+ +
Sbjct: 356 ETSP-VSMMTRVDDTLEARTQ-------------------TVGRVMPHLEIKIADPVTGQ 395
Query: 278 V------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNG 331
G + TRG VML YW+ W+ TGD+G +DD G V + GR
Sbjct: 396 AVPRGQKGELCTRGYAVMLGYWENQEKTAETIDASRWIHTGDLGIMDDNGYVDISGRIKD 455
Query: 332 RIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQ 391
+ GGENVYP EVE L HP I + VVG+A+ + E ++A V L++ +
Sbjct: 456 MVIRGGENVYPREVEEFLYHHPSIRDVQVVGVADEKYGEELMAWVILKDGF--------- 506
Query: 392 SSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
+ L ++EV R+ C K L FK PR +V R+ FP+T +GKIR+ E+R E
Sbjct: 507 -----DSLTAAEV-REFCNGK-LAHFKIPR-YVEVRESFPMTVSGKIRKIELREE 553
>gi|383830174|ref|ZP_09985263.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora xinjiangensis XJ-54]
gi|383462827|gb|EID54917.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora xinjiangensis XJ-54]
Length = 560
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/393 (32%), Positives = 186/393 (47%), Gaps = 53/393 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + GY E+D P H G+ +A
Sbjct: 191 IQYTSGTTGFPKGATLSHHNILNNGFFVGELCGYTEEDRICIPVPFYHCFGMVMGNLAAT 250
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVK 184
GAC V P F+ K LEAV+ TSL VP + +A+LA + G D S++
Sbjct: 251 THGACMVIPAPSFDPKRTLEAVQAERCTSLYGVPTMFIAELA-----DPDFDGYDLASLR 305
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E+MK+ A++ YGMTETS T T D ++E
Sbjct: 306 TGIMAGSPCPVEVMKQVIERMGMAEVAICYGMTETSPVST-QTRADDSVER--------- 355
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 298
+ VG+ PH+E+K+ + G + TRG VML YW+Q
Sbjct: 356 ----------RVSTVGRVGPHLEVKIVDPETGLTVPRGTPGELCTRGYSVMLGYWNQPEK 405
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
V W+ TGD+ +DD G V + GR + GGEN+YP E+E L HP I+
Sbjct: 406 TAEVIDAARWMHTGDVAVMDDDGYVTITGRIKDMVIRGGENIYPREIEEFLYTHPDILDA 465
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+G+ +A+ E ++A VR+R+ + +++E LR C + L FK
Sbjct: 466 QVIGVPDAKYGEELMAWVRMRDGAE---------------PITAEALRAFCTGR-LAHFK 509
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
PR +V + FP+T TGKIR+ E+R + + L
Sbjct: 510 IPR-YVHVVEDFPMTVTGKIRKVEMREKAVELL 541
>gi|111019998|ref|YP_702970.1| AMP-binding acyl-CoA synthetase [Rhodococcus jostii RHA1]
gi|110819528|gb|ABG94812.1| probable AMP-binding acyl-CoA synthetase [Rhodococcus jostii RHA1]
Length = 515
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 216/465 (46%), Gaps = 57/465 (12%)
Query: 6 ESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYS--LRSLPFTHSWA 63
E S + L + T +P L +L S V+ D T D L GY + +
Sbjct: 95 EDSQTTVLLVDDTFVPLLDEMRTLFPSLRAVVHCGDRPTPDGLLGYEDLIATTEAVEDLR 154
Query: 64 PEGAVI--ICFTSGTTGSPKGVVISHSALIVQSLAKIAI----VGYGEDDVYLHTAPLCH 117
G + I +T GT+G PKGV+++H+ L+ SL +A V G L +AP+ H
Sbjct: 155 MGGDTLAGIFYTGGTSGRPKGVMLTHANLMTASLGSLAANRTAVAGGR---ALVSAPMFH 211
Query: 118 IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 177
+ L+S + G V +P FE +AL +E+ + S++ VP ++ L L +
Sbjct: 212 LAALASWNGQNIAGGILVTLPSFEPAAALRLIEEQRINSMLLVPTMIQML--LRHPDREI 269
Query: 178 KGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG 237
+ S+ I G + L++EA +FP+A + YGMTE LT ++ D T
Sbjct: 270 RDLSSITGIQYGASPISETLLREAQRTFPRADFVQGYGMTEAGPGLTSLSADDHHAAT-- 327
Query: 238 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRY 292
+L A G+P HVE++V DG VG I+ RG ++M Y
Sbjct: 328 RLNSA-----------------GRPMGHVEVRVVDDGGVELPRGEVGEIIARGGNIMAGY 370
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
W++ + + + + WL TGD G +D+ G + +V R I SGGENVY EVE L H
Sbjct: 371 WNR-PEETATALRDGWLYTGDGGYMDEDGYLLVVDRLKDMIISGGENVYSTEVENALASH 429
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P ++ V+G+ + R E V A + ++ L+ E +R H + +
Sbjct: 430 PDVVHCAVIGVPDDRFGERVHAFLVMKPGTS----------------LTCEDVRAHTK-R 472
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 457
+ G+KAPR + + P++ GKI E+RR+ S L P+N
Sbjct: 473 LIAGYKAPRSVTIVEQ-MPVSPAGKILERELRRQ-FSDLADRPAN 515
>gi|154250610|ref|YP_001411434.1| AMP-dependent synthetase and ligase [Parvibaculum lavamentivorans
DS-1]
gi|154154560|gb|ABS61777.1| AMP-dependent synthetase and ligase [Parvibaculum lavamentivorans
DS-1]
Length = 520
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 185/391 (47%), Gaps = 59/391 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
I +T GTTG PKGV++SH AL SL+ A G+ D YLH AP+ H+ + + A
Sbjct: 163 IFYTGGTTGFPKGVMLSHKALWTSSLSVGAGTAGFNPDMRYLHAAPMFHLADFAMSTATT 222
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK----TWKGRDSVK 184
+ G HVF+P FE S L+ +EQH + + VP ++ L + + +WKG
Sbjct: 223 IYGGSHVFMPSFEPASFLKLIEQHRASYALLVPTMIRMLLDCPAMAQHDLSSWKG----- 277
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP--GQLPQA 242
+ G +P L++EA P YG TE + T + LE P G+L A
Sbjct: 278 -LFYGASPMPEALLREALAKLPGVAFTQGYGQTELAPIATLLGPEFHVLEGPNAGKLRSA 336
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFL 297
G+P VEL+V DG VG + RG + ML YW+
Sbjct: 337 -----------------GRPGLCVELRVVGPDGKELPRGEVGEVAVRGPNTMLGYWN--- 376
Query: 298 AKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
KP + + W+ TGD G +D+ G +++V R I SGGENV+ EVE ++QH
Sbjct: 377 -KPEQTAATLVDGWVMTGDGGYMDEEGFLYIVDRLKDMIVSGGENVFSAEVENAVMQHDA 435
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ V+G+ + + E V A V +S ++ LS E L HC+ +
Sbjct: 436 VAECAVIGVPDPKWGERVHAVV------------VPKSGRH----LSEEELFAHCKAL-I 478
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
G+K PR + +P P ++ GKI + ++RR
Sbjct: 479 AGYKCPRSADIRHEPLPKSAAGKILKTDLRR 509
>gi|71278812|ref|YP_267411.1| AMP-binding enzyme family protein [Colwellia psychrerythraea 34H]
gi|71144552|gb|AAZ25025.1| AMP-binding enzyme family protein [Colwellia psychrerythraea 34H]
Length = 520
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 185/384 (48%), Gaps = 45/384 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYG-EDDVYLHTAPLCHIGGLSSAMAML 128
I +T GTTG PKGV++SH+ L S+ A +G + YLH AP+ H+ + + AM+
Sbjct: 163 IFYTGGTTGFPKGVMLSHTNLWSSSIVVTAEMGLNVAGERYLHAAPMFHLADVGVSYAMV 222
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ G VF+P FE+ S +EA+E V ++ VP ++ + + S+K I+
Sbjct: 223 IGGLSQVFVPYFEATSVIEAIEHKQVNHVLLVPTMVTMMLATPALDNA--NFSSLKHIIY 280
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP--GQLPQAFGNV 246
G +P + A K I AYG +E S ++ + LE P G+L A
Sbjct: 281 GASPMPEGTLIAAMEKMSSVKFIQAYGQSELSPVISILPAEYHVLEGPNAGKLRSA---- 336
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPS 301
G+PA V +++ + + VG I G + ML YW+ + +
Sbjct: 337 -------------GRPAYCVSVEMRDENGKVLPTGKVGEIAASGPNSMLGYWNN-TEQTA 382
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ + W+ TGD G +D+ G ++LV R I +GGENV+ EVE L HP I VV+
Sbjct: 383 ATLIDGWVLTGDAGYMDEDGFIFLVDRLKDMIVTGGENVFSAEVENALSHHPAIQESVVL 442
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI + + E V A +RL E + ++ E + HCRE + G+K P+
Sbjct: 443 GIPSEQWGESVHAILRLNEGQE----------------ITDEEIFSHCREY-IAGYKVPQ 485
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRR 445
+ + FP+T GKI ++E+R
Sbjct: 486 SIEIRVEAFPITGAGKIMKNELRE 509
>gi|392953725|ref|ZP_10319279.1| AMP-dependent synthetase and ligase [Hydrocarboniphaga effusa
AP103]
gi|391859240|gb|EIT69769.1| AMP-dependent synthetase and ligase [Hydrocarboniphaga effusa
AP103]
Length = 575
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 130/445 (29%), Positives = 202/445 (45%), Gaps = 47/445 (10%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
+L +P LR + LG S + L ++ R + AV I FT
Sbjct: 159 QLHAARLPQLRLVIRLGDEVSPGMLGFSSLLSEPAAEARARLDAIASAVDAHSAVNIQFT 218
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGA 132
SGTTGSPKG ++H ++ + DD PL H G+ +A + GA
Sbjct: 219 SGTTGSPKGATLTHRNILNNGYFVGRAMRLTHDDKLCIPVPLYHCFGMVMGNLACVTHGA 278
Query: 133 CHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
C VF F++ S L+ V+ T+L VP + +A L + DS++ + G
Sbjct: 279 CMVFPADSFDAASVLQTVQDERCTALHGVPTMF--IAELDHPDFSRYTLDSLRTGIMAGA 336
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P E+M++A ++ AYGMTETS ++F + D LE
Sbjct: 337 PCPIEVMRKAIERMHLREITIAYGMTETSP-VSFQSATDDPLER---------------- 379
Query: 252 HQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGE 306
+ +G+ PH+E+K+ +G + + G +L RG VML YW+ E
Sbjct: 380 ---RVSTIGRVQPHLEVKIVDEGGNTLPRGQRGELLVRGYSVMLGYWNDAQRTADTIDAE 436
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
W+ TGD+G ID+ G ++GR + GGENVYP E+E L +HP I + VVG+ +A
Sbjct: 437 GWMRTGDLGLIDEEGYASILGRAKDMVIRGGENVYPREIEEFLYRHPRIRDVQVVGVPDA 496
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E + ACV + SE + +R CR + +K PR +V++
Sbjct: 497 KFGEELCACVIAQPGEATSEDD----------------IRAFCR-GEIAHYKIPR-YVVF 538
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHL 451
FP+T TGKI++ +R+ + L
Sbjct: 539 VDEFPMTVTGKIQKFALRQAMSDRL 563
>gi|171315762|ref|ZP_02904994.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
gi|171099061|gb|EDT43841.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
Length = 512
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 183/386 (47%), Gaps = 55/386 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTGSPKGV++SH+ L+ L+ +A E L APL H+G LS + +
Sbjct: 163 ILYTGGTTGSPKGVMLSHTNLVSNVLSSLAATPRPEVKTVLQIAPLFHVGALSFVLQSMT 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
A V P F+ K+AL + +H V + VP ++ L L S++ I+ G
Sbjct: 223 RIATQVIHPGFDPKAALRDIAKHQVNEIFIVPTMLKVL--LDEPSFAEHEMSSLRNIIYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ + L++ A P ++ + AYGMTETS LP A +VT
Sbjct: 281 AAPIDASLLQSAMERIPSSQFLQAYGMTETSP-------------VSAMLPAAC-HVTGG 326
Query: 250 SVHQPQGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 301
P+ G+PAP E+++ C G + G I RG VML YW+ KP
Sbjct: 327 ----PKLKAAGRPAPACEIRIVDLATDVDCLTGIA--GEIAVRGPGVMLGYWN----KPE 376
Query: 302 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ + W+ TGDIG +D G +++ R I SGGENVY EVE +L HP +
Sbjct: 377 ETAKALRNGWMHTGDIGYLDADGFLYVTDRIKDMIISGGENVYSTEVENAILTHPAVQLC 436
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVGI + E+V A V LR + E LR HCRE ++ +K
Sbjct: 437 AVVGIPDETWGEIVHAIVVLRPGHT----------------VGIEDLRTHCRE-SIASYK 479
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVR 444
PR + +R PL++ GK+ + ++R
Sbjct: 480 CPR-SIEFRSELPLSAAGKLLKYKLR 504
>gi|407800909|ref|ZP_11147755.1| acyl-CoA synthase [Oceaniovalibus guishaninsula JLT2003]
gi|407057247|gb|EKE43237.1| acyl-CoA synthase [Oceaniovalibus guishaninsula JLT2003]
Length = 517
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 172/366 (46%), Gaps = 49/366 (13%)
Query: 83 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFES 142
V++SH+ L V S + + G+ + + L + P+ H+G S + ++ V +P+F++
Sbjct: 182 VMLSHANLFVNSSGAVPVYGFRQRETQLLSGPMFHLGSGSRVFSAALLCTHTVIVPRFDA 241
Query: 143 KSALEAVEQHCVTSLITVPAIMA---DLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 199
A+ A+E H + ++ VP ++A D R + S++ I G +P EL++
Sbjct: 242 AEAMRAIETHRIATVQLVPTMLAMILDHPDFARFDLS-----SLRLITYGAAVMPVELLR 296
Query: 200 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 259
A + P + AYGMTETS +T +T D G+L V
Sbjct: 297 RALTALPGVNFVQAYGMTETSPVVTVLT-SDHHAPDSGKLD-----------------TV 338
Query: 260 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 314
G P PH +L++ + + G+ILTRG HVM YW+Q A G W TGD
Sbjct: 339 GLPMPHADLRIVDEDDRDLPTGATGQILTRGPHVMCGYWNQPEATAKALRGG-WYHTGDA 397
Query: 315 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 374
G +D G + + GR I SGGEN+YP E+E LL HPG+ V+G+A+ V A
Sbjct: 398 GWLDTDGFLHIAGRTAEMIVSGGENIYPVEIEHALLAHPGVADAAVIGVADPHWGARVHA 457
Query: 375 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 434
V S ++ + L HCR + G+K PR +W P PLT+
Sbjct: 458 VV----------------SPAPGCRVTLDDLAAHCRTV-IAGYKCPRGLTVWDGPLPLTN 500
Query: 435 TGKIRR 440
GK+ +
Sbjct: 501 IGKLDK 506
>gi|407694368|ref|YP_006819156.1| long-chain-fatty-acid-CoA ligase [Alcanivorax dieselolei B5]
gi|407251706|gb|AFT68813.1| Long-chain-fatty-acid-CoA ligase, putative [Alcanivorax dieselolei
B5]
Length = 560
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 183/388 (47%), Gaps = 47/388 (12%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLS 122
P+ + I +TSGTTG PKG +SH ++ +G+ E D + PL H G +
Sbjct: 199 PDDPINIQYTSGTTGFPKGATLSHRNILNNGYMVAESMGFTERDRLVIPVPLYHCFGMVM 258
Query: 123 SAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+ + G+ ++ P F+ ++ LEAV T+L VP + R+K+
Sbjct: 259 GNLGCMTHGSTMIYPAPGFDPEATLEAVASERATALYGVPTMFIAELGHPRIKEF--DLS 316
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P E+M+ + ++ AYGMTETS ++ T D LE
Sbjct: 317 SLRTGIMAGATCPIEVMRRVISEMHMEEVQIAYGMTETSP-VSLQTGADDELER------ 369
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQF 296
+ VG+ PH+E KV + + +G + TRG VML YW+
Sbjct: 370 -------------RVSTVGRTQPHLETKVVDEQGNTVPRGEIGELCTRGYSVMLGYWNNP 416
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
A + W+ TGD+ +DD G V +VGR I GGEN+YP E+E L HP ++
Sbjct: 417 DATAGAIDDDGWMHTGDLAVMDDAGYVRIVGRSKDMIIRGGENIYPREIEEFLYTHPAVV 476
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ V+GI + + E +VA V+L+ Q +EVLR +C+ + +
Sbjct: 477 DVQVIGIPDDKYGEEIVAWVKLKSGEQ----------------ADAEVLRDYCKNR-IAH 519
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
FK PR F + FP+T TGKI++ +R
Sbjct: 520 FKTPRHF-KFVDDFPMTVTGKIQKFRMR 546
>gi|385680892|ref|ZP_10054820.1| AMP-binding domain protein [Amycolatopsis sp. ATCC 39116]
Length = 533
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 186/393 (47%), Gaps = 53/393 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E D P H G+ +A
Sbjct: 180 IQYTSGTTGFPKGATLSHHNILNNGFFVGELCHYTEADRVCIPVPFYHCFGMVMGNLAAT 239
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVK 184
GAC V P FE K+ L+AVE TSL VP + +A+LA + ++ D S++
Sbjct: 240 THGACMVIPAPSFEPKATLQAVEAERCTSLYGVPTMFIAELA-----EPGFEDYDLSSLR 294
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E+MK+ A++ YGMTETS T T D ++E
Sbjct: 295 TGIMAGSPCPVEVMKQVIERMGMAEVSICYGMTETSPVST-QTRSDDSIER--------- 344
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLA 298
+ VG+ PH+E+K+ + G + TRG VML YWDQ
Sbjct: 345 ----------RVSTVGRVGPHLEVKIVDPETGLTVPRGEPGELCTRGYSVMLGYWDQPDK 394
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
V W+ TGD+G +DD G + + GR + GGEN+YP E+E L HP ++
Sbjct: 395 TAEVIDKARWMHTGDLGVMDDEGYIQITGRIKDMVIRGGENIYPREIEEFLYTHPDVLDA 454
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+G+ + R E ++A +R+RE Q L++E LR+ C K L +K
Sbjct: 455 QVIGVPDQRYGEELMAWIRMREGAQ---------------PLTAESLREFCTGK-LAHYK 498
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
P+ +V FP+T TGK+R+ E+R + + L
Sbjct: 499 IPK-YVHIVDEFPMTVTGKVRKVEMREKALKIL 530
>gi|384567576|ref|ZP_10014680.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora glauca K62]
gi|384523430|gb|EIF00626.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora glauca K62]
Length = 548
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/393 (32%), Positives = 185/393 (47%), Gaps = 53/393 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + GY E+D P H G+ +A
Sbjct: 191 IQYTSGTTGFPKGATLSHHNILNNGFFVGELCGYTEEDRICIPVPFYHCFGMVMGNLAAT 250
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVK 184
GAC V P F+ K LEAV+ TSL VP + +A+LA ++ D S++
Sbjct: 251 SHGACMVIPAPAFDPKKTLEAVQAERCTSLYGVPTMFIAELA-----DPDFEDYDLTSLR 305
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E+MK+ A++ YGMTETS ++ T D +LE
Sbjct: 306 TGIMAGSPCPVEVMKQVIERMGMAEVSICYGMTETSP-VSTQTRADDSLER--------- 355
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 298
+ VGK PH+E+K+ + G + TRG VML YW+Q
Sbjct: 356 ----------RVSTVGKVGPHLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWEQPEK 405
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
V W+ TGD+ +DD G V + GR + GGEN+YP E+E L HP I+
Sbjct: 406 TAEVIDAARWMHTGDLAVMDDDGYVTITGRIKDMVIRGGENIYPREIEEFLYTHPDILDA 465
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+G+ + + E ++A VR+R+ + L++E LR+ C K L +K
Sbjct: 466 QVIGVPDPKYGEELMAWVRMRDGAE---------------PLTAESLREFCTGK-LAHYK 509
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
PR +V FP+T TGKIR+ E+R + L
Sbjct: 510 IPR-YVHVVDEFPMTVTGKIRKVEMRERAVELL 541
>gi|420866096|ref|ZP_15329485.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0303]
gi|420870891|ref|ZP_15334273.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0726-RA]
gi|420875337|ref|ZP_15338713.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0726-RB]
gi|420988058|ref|ZP_15451214.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0206]
gi|421040590|ref|ZP_15503598.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0116-R]
gi|421045689|ref|ZP_15508689.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0116-S]
gi|392064812|gb|EIT90661.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0303]
gi|392066812|gb|EIT92660.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0726-RB]
gi|392070361|gb|EIT96208.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0726-RA]
gi|392182337|gb|EIV07988.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0206]
gi|392221518|gb|EIV47041.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0116-R]
gi|392235142|gb|EIV60640.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0116-S]
Length = 515
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 184/383 (48%), Gaps = 46/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAML 128
+ +T GTTG+PKGV++SH+ ++ ++ ++ + LH+AP+ H+ S+ +A
Sbjct: 163 VFYTGGTTGNPKGVMLSHNNVLASAMGSLSTGNFLTRGGRLLHSAPMFHMADFSAVLAGN 222
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ G+ HV +P F + L+A+ H V ++ VP ++ L + ++ I
Sbjct: 223 LSGSTHVIVPSFSPQGVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIRSITY 280
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G + +++ AT FP A+ AYGMTE S T + D + P L A
Sbjct: 281 GASVISEAVLQRATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA------ 332
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
G+ APH E+++ + V G ++ +G +VML YW + + + +
Sbjct: 333 -----------GRAAPHCEVRIVDPNDNEVPRGEIGEVIVKGDNVMLGYW-ELPEESAAA 380
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W+ TGD G +DD G V++V R + +GGENVY EVE L +HP + V+GI
Sbjct: 381 IRDGWMHTGDAGRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACAVIGI 440
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E V A V Q CD L++HCRE ++ +K PR F
Sbjct: 441 PDEQWGERVHAVV----VKQAQSECCDGD------------LQEHCRE-HIANYKVPRSF 483
Query: 424 VLWRKPFPLTSTGKIRRDEVRRE 446
+ PL+ GKI + +R++
Sbjct: 484 EFVDE-LPLSGAGKILKRVLRQK 505
>gi|365872522|ref|ZP_09412059.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|414580929|ref|ZP_11438069.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-1215]
gi|420880463|ref|ZP_15343830.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0304]
gi|420886271|ref|ZP_15349631.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0421]
gi|420890605|ref|ZP_15353952.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0422]
gi|420895102|ref|ZP_15358441.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0708]
gi|420900440|ref|ZP_15363771.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0817]
gi|420907863|ref|ZP_15371181.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-1212]
gi|420974296|ref|ZP_15437487.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0921]
gi|421051638|ref|ZP_15514632.1| feruloyl-CoA synthetase [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|363993205|gb|EHM14430.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|392077865|gb|EIU03692.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0422]
gi|392082034|gb|EIU07860.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0421]
gi|392085372|gb|EIU11197.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0304]
gi|392094414|gb|EIU20209.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0708]
gi|392097801|gb|EIU23595.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0817]
gi|392105767|gb|EIU31553.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-1212]
gi|392116081|gb|EIU41849.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-1215]
gi|392162179|gb|EIU87869.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0921]
gi|392240241|gb|EIV65734.1| feruloyl-CoA synthetase [Mycobacterium massiliense CCUG 48898]
Length = 515
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 184/383 (48%), Gaps = 46/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAML 128
+ +T GTTG+PKGV++SH+ ++ ++ ++ + LH+AP+ H+ S+ +A
Sbjct: 163 VFYTGGTTGNPKGVMLSHNNVLASAMGSLSTGNFLTRGGRLLHSAPMFHMADFSAVLAGN 222
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ G+ HV +P F + L+A+ H V ++ VP ++ L + ++ I
Sbjct: 223 LSGSTHVIVPSFTPQEVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIRSITY 280
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G + +++ AT FP A+ AYGMTE S T + D + P L A
Sbjct: 281 GASVISEAVLQRATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA------ 332
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
G+ APH E+++ + V G ++ +G +VML YW + + + +
Sbjct: 333 -----------GRAAPHCEVRIVDPDDNEVPRGEIGEVIVKGDNVMLGYW-ELPEESAAA 380
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W+ TGD G +DD G V++V R + +GGENVY EVE L +HP + V+GI
Sbjct: 381 IRDGWMHTGDAGRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACAVIGI 440
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E V A V Q CD L++HCRE ++ +K PR F
Sbjct: 441 PDEQWGERVHAVV----VKQAQSECCDGD------------LQEHCRE-HIANYKVPRSF 483
Query: 424 VLWRKPFPLTSTGKIRRDEVRRE 446
+ PL+ GKI + +R++
Sbjct: 484 EFVDE-LPLSGAGKILKRVLRQK 505
>gi|419716292|ref|ZP_14243690.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
M94]
gi|382941498|gb|EIC65817.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
M94]
Length = 515
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 184/383 (48%), Gaps = 46/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAML 128
+ +T GTTG+PKGV++SH+ ++ ++ ++ + LH+AP+ H+ S+ +A
Sbjct: 163 VFYTGGTTGNPKGVMLSHNNVLASAMGSLSTGNFLTRGGRLLHSAPMFHMADFSAVLAGN 222
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ G+ HV +P F + L+A+ H V ++ VP ++ L + ++ I
Sbjct: 223 LSGSTHVIVPSFSPQGVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIRSITY 280
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G + +++ AT FP A+ AYGMTE S T + D + P L A
Sbjct: 281 GASVISEAVLQRATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA------ 332
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
G+ APH E+++ + V G ++ +G +VML YW + + + +
Sbjct: 333 -----------GRAAPHCEVRIVDPDDNEVPRGEIGEVIVKGDNVMLGYW-ELPEESAAA 380
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W+ TGD G +DD G V++V R + +GGENVY EVE L +HP + V+GI
Sbjct: 381 IRDGWMHTGDAGRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACAVIGI 440
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E V A V Q CD L++HCRE ++ +K PR F
Sbjct: 441 PDEQWGERVHAVV----VKQAQSECCDGD------------LQEHCRE-HIANYKVPRSF 483
Query: 424 VLWRKPFPLTSTGKIRRDEVRRE 446
+ PL+ GKI + +R++
Sbjct: 484 EFVDE-LPLSGAGKILKRVLRQK 505
>gi|441518909|ref|ZP_21000618.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
gi|441454220|dbj|GAC58579.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
Length = 522
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 182/386 (47%), Gaps = 49/386 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV++SH LI + + + Y D YLH P+ H+ +S +A+
Sbjct: 165 IFYTGGTTGRPKGVLLSHDNLIANAKHALICLRYTHHDTYLHAGPMFHLADGASTVALTW 224
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKIL 187
VG HV I F+ + LE VE+ VT + VP ++ L + + RD +++ +L
Sbjct: 225 VGGTHVIIGGFDRELWLETVEREGVTRAMLVPTMLTML-----LSEPLGDRDLSTLQSVL 279
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G +P+ L++ A + YGMTE + +TF+T D P+A
Sbjct: 280 YGASPMPTALLRTAIQTL-GCDFCQVYGMTEAAPIVTFLTHEDHRDGIAATSPEA----- 333
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSV 302
Q + G+P V++ + S VG I RG +VM Y L KP
Sbjct: 334 -----QARLRSAGRPIVGVDVVIRDPQGSPLPTGDVGEITVRGMNVMQGY----LNKPD- 383
Query: 303 STGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
T +V W TGD+G +D G +++V R I +GGENVY EVE L +HP +I +
Sbjct: 384 ETADVLIDGWFHTGDMGYLDGSGYLYVVDRLKDMIITGGENVYSTEVENALYRHPDVIEV 443
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V G + R E V A V LR EL+ E LR HCR+ + G+K
Sbjct: 444 AVFGTPDPRWGEAVTAAVVLRRD-------------GDELV---EELRDHCRDL-IAGYK 486
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVR 444
PR+ + + P + GKI + +R
Sbjct: 487 VPRVIHIVDEALPKSGAGKILKRNLR 512
>gi|169631633|ref|YP_001705282.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
ATCC 19977]
gi|419708247|ref|ZP_14235717.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
M93]
gi|420912220|ref|ZP_15375532.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0125-R]
gi|420918674|ref|ZP_15381977.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0125-S]
gi|420923844|ref|ZP_15387140.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0728-S]
gi|420929503|ref|ZP_15392782.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-1108]
gi|420933809|ref|ZP_15397082.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-151-0930]
gi|420936357|ref|ZP_15399626.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-152-0914]
gi|420944068|ref|ZP_15407323.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-153-0915]
gi|420949493|ref|ZP_15412742.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-154-0310]
gi|420969190|ref|ZP_15432393.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0810-R]
gi|420979841|ref|ZP_15443018.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0212]
gi|420985226|ref|ZP_15448393.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0728-R]
gi|421010288|ref|ZP_15473397.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0119-R]
gi|421015396|ref|ZP_15478470.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0122-R]
gi|421020490|ref|ZP_15483546.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0122-S]
gi|421025231|ref|ZP_15488274.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0731]
gi|421030972|ref|ZP_15494002.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0930-R]
gi|421036476|ref|ZP_15499493.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0930-S]
gi|169243600|emb|CAM64628.1| Putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus]
gi|382944279|gb|EIC68587.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
M93]
gi|392111565|gb|EIU37335.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0125-S]
gi|392114214|gb|EIU39983.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0125-R]
gi|392126491|gb|EIU52242.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-1108]
gi|392128497|gb|EIU54247.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0728-S]
gi|392132221|gb|EIU57966.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-151-0930]
gi|392141872|gb|EIU67597.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-152-0914]
gi|392145674|gb|EIU71398.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-153-0915]
gi|392150534|gb|EIU76247.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-154-0310]
gi|392164119|gb|EIU89808.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0212]
gi|392170222|gb|EIU95900.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0728-R]
gi|392195894|gb|EIV21513.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0119-R]
gi|392196031|gb|EIV21649.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0122-R]
gi|392206213|gb|EIV31796.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0122-S]
gi|392208754|gb|EIV34326.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0731]
gi|392218854|gb|EIV44379.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0930-R]
gi|392220328|gb|EIV45852.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0930-S]
gi|392244846|gb|EIV70324.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0810-R]
Length = 515
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 184/383 (48%), Gaps = 46/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAML 128
+ +T GTTG+PKGV++SH+ ++ ++ ++ + LH+AP+ H+ S+ +A
Sbjct: 163 VFYTGGTTGNPKGVMLSHNNVLASAMGSLSTGNFLTRGGRLLHSAPMFHMADFSAVLAGN 222
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ G+ HV +P F + L+A+ H V ++ VP ++ L + ++ I
Sbjct: 223 LSGSTHVIVPSFSPQGVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIRSITY 280
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G + +++ AT FP A+ AYGMTE S T + D + P L A
Sbjct: 281 GASVISEAVLQRATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA------ 332
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
G+ APH E+++ + V G ++ +G +VML YW + + + +
Sbjct: 333 -----------GRAAPHCEVRIVDPDDNEVPRGEIGEVIVKGDNVMLGYW-ELPEESAAA 380
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W+ TGD G +DD G V++V R + +GGENVY EVE L +HP + V+GI
Sbjct: 381 IRDGWMHTGDAGRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACAVIGI 440
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E V A V Q CD L++HCRE ++ +K PR F
Sbjct: 441 PDEQWGERVHAVV----VKQAQSECCDGD------------LQEHCRE-HIANYKVPRSF 483
Query: 424 VLWRKPFPLTSTGKIRRDEVRRE 446
+ PL+ GKI + +R++
Sbjct: 484 EFVDE-LPLSGAGKILKRVLRQK 505
>gi|451972653|ref|ZP_21925858.1| Acyl-CoA synthetase [Vibrio alginolyticus E0666]
gi|451931469|gb|EMD79158.1| Acyl-CoA synthetase [Vibrio alginolyticus E0666]
Length = 513
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 191/388 (49%), Gaps = 58/388 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG ++ +I+ +L I+G DD++L T PL H G + + A
Sbjct: 172 VILYTSGTTGLPKGAELTQQNIIMNALVAQNIMGSQADDIHLVTLPLFHTFGQTVHLNAS 231
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
++ GA V +P+FE K LE +E+H VT VP + L + V+ + S++ +
Sbjct: 232 VLGGATLVLVPRFEPKHVLELMEKHKVTLFAGVPTMYIGL---LHVQHQFD-TSSLRVAI 287
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
+GG LP+E+ + F ++ YG++ETS F L + PG
Sbjct: 288 SGGAPLPTEIFRSFEEQF-NVPILEGYGLSETSPIACFNHLDQERI--PG---------- 334
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+P VE+KV +G++ G I+ RG +VM Y D +P V
Sbjct: 335 ----------SVGQPIQGVEVKVVDIEGNALPIGEEGEIVVRGHNVMKGYLD----RPEV 380
Query: 303 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ + W TGD+G D GN+++V R I GG NVYP E+E V + HP I +
Sbjct: 381 TESALQNGWFHTGDVGRFDSSGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAISMVA 440
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+GI N E + A V L+ + +E L++ +E+ L FK
Sbjct: 441 VIGIPNEEYGEEIKAYVVLKPGE----------------YIDAETLQKWGKEQ-LASFKY 483
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREV 447
PR +V R+ P+++TGKI + E++ E+
Sbjct: 484 PR-YVEIREHLPMSATGKILKRELKSEL 510
>gi|94311461|ref|YP_584671.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
gi|93355313|gb|ABF09402.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
Length = 516
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 186/394 (47%), Gaps = 62/394 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV++SH+ LI + + E V +H P+ H+ +S A+ +
Sbjct: 163 IFYTGGTTGFPKGVMLSHANLISSACNQPMSGTVDESIVMMHVMPMFHLACFASINAVFL 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR--------- 180
VG HV I F+ +E + Q VT+++ P T+I++ W R
Sbjct: 223 VGGTHVAISAFDPGRMMEGIAQDRVTAVLLAP-------TMIQMGLDWMDRHPGRAAELD 275
Query: 181 -DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM--TLYDPTLETPG 237
S+ + G + L++ +FP + YGMTE + T + +D + G
Sbjct: 276 LSSLNSLRYGASPMTPALLERTRQTFPAVRFSQGYGMTELAPVATMLGPEYHDAAAQASG 335
Query: 238 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRY 292
++ VG+PA VE+KV + V G I+ RG +VML Y
Sbjct: 336 KM-----------------YSVGRPAHTVEVKVVDSRGNEVPRGTVGEIIVRGPNVMLGY 378
Query: 293 WDQFLAKP-SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
W+Q A ++ G W+ TGD G +D G ++LV R I SGGENVY EVE L
Sbjct: 379 WNQPQATAEAIRNG--WMHTGDGGYMDKDGFLFLVDRLKDMIISGGENVYSAEVEKALAS 436
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
HP + V+G+ + + E V A V LR+ ES +S ++ HCRE
Sbjct: 437 HPAVAQSSVIGVPHEKWGESVHAVVVLRQ----GESATLES------------IQSHCRE 480
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
+ + G+K PR V + PL+S GK+ ++E+R+
Sbjct: 481 R-IAGYKIPR-SVEFVDALPLSSVGKVLKNELRK 512
>gi|418422838|ref|ZP_12996009.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
subsp. bolletii BD]
gi|363993911|gb|EHM15133.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
subsp. bolletii BD]
Length = 515
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 184/383 (48%), Gaps = 46/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAML 128
+ +T GTTG+PKGV++SH+ ++ ++ ++ + LH+AP+ H+ S+ +A
Sbjct: 163 VFYTGGTTGNPKGVMLSHNNVLASAMGSLSTGNFLTRGGRLLHSAPMFHMADFSAVLAGN 222
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ G+ HV +P F + L+A+ H V ++ VP ++ L + ++ I
Sbjct: 223 LSGSTHVIVPSFTPQGVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIRSITY 280
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G + +++ AT FP A+ AYGMTE S T + D + P L A
Sbjct: 281 GASVISEAVLQRATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA------ 332
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
G+ APH E+++ + V G ++ +G +VML YW + + + +
Sbjct: 333 -----------GRAAPHCEVRIVDPDDNEVPRGEIGEVIVKGDNVMLGYW-ELPDESAAA 380
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W+ TGD G +DD G V++V R + +GGENVY EVE L +HP + V+GI
Sbjct: 381 IRDGWMHTGDAGRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACAVIGI 440
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E V A V Q CD L++HCRE ++ +K PR F
Sbjct: 441 PDEQWGERVHAVV----VKQAQSECCDGD------------LQEHCRE-HIANYKVPRSF 483
Query: 424 VLWRKPFPLTSTGKIRRDEVRRE 446
+ PL+ GKI + +R++
Sbjct: 484 EFVDE-LPLSGAGKILKRVLRQK 505
>gi|397680719|ref|YP_006522254.1| long-chain-fatty-acid--CoA ligase [Mycobacterium massiliense str.
GO 06]
gi|418251010|ref|ZP_12877212.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
47J26]
gi|420954176|ref|ZP_15417418.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0626]
gi|420958351|ref|ZP_15421585.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0107]
gi|420963308|ref|ZP_15426532.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-1231]
gi|420994292|ref|ZP_15457438.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0307]
gi|421000069|ref|ZP_15463204.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0912-R]
gi|421004591|ref|ZP_15467713.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0912-S]
gi|353449200|gb|EHB97598.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
47J26]
gi|392153089|gb|EIU78796.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0626]
gi|392178851|gb|EIV04504.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0912-R]
gi|392180394|gb|EIV06046.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0307]
gi|392193294|gb|EIV18918.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0912-S]
gi|392246221|gb|EIV71698.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-1231]
gi|392248077|gb|EIV73553.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0107]
gi|395458984|gb|AFN64647.1| Long-chain-fatty-acid--CoA ligase [Mycobacterium massiliense str.
GO 06]
Length = 515
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 184/383 (48%), Gaps = 46/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAML 128
+ +T GTTG+PKGV++SH+ ++ ++ ++ + LH+AP+ H+ S+ +A
Sbjct: 163 VFYTGGTTGNPKGVMLSHNNVLASAMGSLSTGNFLTRGGRLLHSAPMFHMADFSAVLAGN 222
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ G+ HV +P F + L+A+ H V ++ VP ++ L + ++ I
Sbjct: 223 LSGSTHVIVPSFTPQGVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIRSITY 280
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G + +++ AT FP A+ AYGMTE S T + D + P L A
Sbjct: 281 GASVISEAVLQRATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA------ 332
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
G+ APH E+++ + V G ++ +G +VML YW + + + +
Sbjct: 333 -----------GRAAPHCEVRIVDPDDNEVPRGEIGEVIVKGDNVMLGYW-ELPEESAAA 380
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W+ TGD G +DD G V++V R + +GGENVY EVE L +HP + V+GI
Sbjct: 381 IRDGWMHTGDAGRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACAVIGI 440
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E V A V Q CD L++HCRE ++ +K PR F
Sbjct: 441 PDEQWGERVHAVV----VKQAQSECCDGD------------LQEHCRE-HIANYKVPRSF 483
Query: 424 VLWRKPFPLTSTGKIRRDEVRRE 446
+ PL+ GKI + +R++
Sbjct: 484 EFVDE-LPLSGAGKILKRVLRQK 505
>gi|419961754|ref|ZP_14477757.1| AMP-binding acyl-CoA synthetase [Rhodococcus opacus M213]
gi|414572778|gb|EKT83468.1| AMP-binding acyl-CoA synthetase [Rhodococcus opacus M213]
Length = 515
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 189/386 (48%), Gaps = 52/386 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAI----VGYGEDDVYLHTAPLCHIGGLSSAM 125
I +T GT+G PKGV+++H L+ SL +A V G L +AP+ H+ L+S
Sbjct: 163 IFYTGGTSGRPKGVMLTHLNLMTASLGSLAANHTAVAGGR---ALLSAPMFHLAALASWN 219
Query: 126 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ G V +P FE +AL +E+ + S++ VP ++ L L ++ + S+
Sbjct: 220 GQNIAGGILVMLPSFEPAAALRLIEEQRINSMLLVPTMIQML--LRHPEREIRDLSSITA 277
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
I G + L+++A +FPKA + YGMTE LT ++ D T +L A
Sbjct: 278 IQYGASPISETLLRQAQRAFPKADFVQGYGMTEAGPGLTSLSADDHHAAT--RLNSA--- 332
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKP 300
G+P HVEL+V D + VG I+ RG ++M YW++ +
Sbjct: 333 --------------GRPMGHVELRVVDDRGNELPRGEVGEIIARGGNIMTGYWNR-PEET 377
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+ + + WL TGD G +D+ G +++V R I SGGENVY EVE L HP ++ V
Sbjct: 378 AAALRDGWLYTGDGGYMDEDGYLFVVDRLKDMIISGGENVYSTEVENALASHPDVVQCAV 437
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ + R E V A + ++ + CD +R H + K + G+K+P
Sbjct: 438 IGVPDDRFGERVHAFLVMKPG---TSLTCDD-------------VRAHAK-KLIAGYKSP 480
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRRE 446
R + + P++ GKI + E+RR+
Sbjct: 481 RSITIVEQ-MPVSPAGKILKRELRRQ 505
>gi|269967038|ref|ZP_06181106.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
40B]
gi|269828297|gb|EEZ82563.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
40B]
Length = 538
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 194/388 (50%), Gaps = 58/388 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG ++ +I+ +L I+G DD++L T PL H G + + A
Sbjct: 197 VILYTSGTTGLPKGAELTQQNIIMNALVAQNIMGSQADDIHLVTLPLFHTFGQTVHLNAS 256
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
++ GA V +P+FE K LE VE+H VT VP + L + V+ + S++ +
Sbjct: 257 VLGGATLVLVPRFEPKHVLELVEKHRVTIFAGVPTMYIGL---LHVQHQFD-TSSLRVAV 312
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
+GG LP+E+ + +F ++ YG++ETS F L + PG
Sbjct: 313 SGGAPLPTEIFRTFEETF-NVPILEGYGLSETSPIACFNHLDQERI--PG---------- 359
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+P VE+KV +G++ G I+ RG +VM Y D +P V
Sbjct: 360 ----------SVGQPVQGVEVKVIDIEGNALPIGEEGEIVVRGHNVMKGYLD----RPEV 405
Query: 303 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ + W TGD+G D GN+++V R I GG NVYP E+E V + HP + +
Sbjct: 406 TESALQNGWFHTGDVGRFDSSGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVSMVA 465
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+GI N E + A V L K KE + ++ L++ +E+ L FK
Sbjct: 466 VIGIPNEEYGEEIKAYVVL---------------KPKE-YIDADSLQKWGKEQ-LASFKY 508
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREV 447
PR +V R+ P+++TGKI + E++ E+
Sbjct: 509 PR-YVEIREHLPMSATGKILKRELKSEL 535
>gi|373856103|ref|ZP_09598848.1| AMP-dependent synthetase and ligase [Bacillus sp. 1NLA3E]
gi|372453940|gb|EHP27406.1| AMP-dependent synthetase and ligase [Bacillus sp. 1NLA3E]
Length = 547
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 212/455 (46%), Gaps = 61/455 (13%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEG 66
+L+ +P L+ + LG SD + D+++ ++LK S P+
Sbjct: 139 QLKSEKLPFLKNVIVLGEKRYPGMFLWSDLLEMADLVSDELLKAR-------MESLDPDD 191
Query: 67 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAM 125
+ + +TSGTTG PKGV+++H+ L+ ++ A + D P H G + +
Sbjct: 192 VINMQYTSGTTGFPKGVMLTHNNLVNNAVNVAACMNLTHKDRMCIPVPFFHCFGCVLGTL 251
Query: 126 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ VGA V + +F L AV+ T+L VP + +A L + S++
Sbjct: 252 TCVAVGATMVPVKEFNVTDVLSAVQDEKCTALHGVPTMF--IAELNHPEFEKYELSSLRT 309
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P+E+MK T + +++ YG TE+S +T DP +
Sbjct: 310 GIMAGSTCPAEVMKAVTETMGASEITITYGQTESSPGITMTRTNDPF------------D 357
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAK 299
+ NSV G+ P+VE+K+ ++ G + TRG HVM Y+ A
Sbjct: 358 LRVNSV--------GRAMPNVEVKIVDPTTNKEVPFGVPGELCTRGYHVMKGYYKNPAAT 409
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
E WL TGDI +D+ G + GR I GGEN+YP E+E L HP ++ +
Sbjct: 410 ADAIDEENWLHTGDIAVMDENGYCQITGRLKDMIIRGGENIYPREIEEFLYTHPKVLDVQ 469
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VVGI + + E V A +RL+E + +SE +R +C+ K ++ FK
Sbjct: 470 VVGIPDEKYGEEVTAWIRLKE----------------DTTATSEEIRDYCKGK-ISRFKI 512
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
PR ++ + + FP+T++GKI++ ++R + + + L
Sbjct: 513 PR-YIEFCEAFPMTASGKIQKFKLREDAIKFVNVL 546
>gi|254230509|ref|ZP_04923881.1| Acyl-CoA synthetases [Vibrio sp. Ex25]
gi|262393852|ref|YP_003285706.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. Ex25]
gi|151936957|gb|EDN55843.1| Acyl-CoA synthetases [Vibrio sp. Ex25]
gi|262337446|gb|ACY51241.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. Ex25]
Length = 513
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 191/388 (49%), Gaps = 58/388 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG ++ +I+ +L I+G DD++L T PL H G + + A
Sbjct: 172 VILYTSGTTGLPKGAELTQQNIIMNALVAQNIMGSQADDIHLVTLPLFHTFGQTVHLNAS 231
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
++ GA V +P+FE K LE +E+H VT VP + L + V+ + S++ +
Sbjct: 232 VLGGATLVLVPRFEPKHVLELMEKHKVTLFAGVPTMYIGL---LHVQHQFD-TSSLRVAI 287
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
+GG LP+E+ + F ++ YG++ETS F L + PG
Sbjct: 288 SGGAPLPTEIFRAFEEQF-NVPILEGYGLSETSPIACFNHLDQERI--PG---------- 334
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+P VE+KV +G++ G I+ RG +VM Y D +P V
Sbjct: 335 ----------SVGQPIQGVEVKVVDIEGNALPIGEEGEIVVRGHNVMKGYLD----RPEV 380
Query: 303 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ + W TGD+G D GN+++V R I GG NVYP E+E V + HP I +
Sbjct: 381 TESALQNGWFHTGDVGRFDCSGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAISMVA 440
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+GI N E + A V L+ + +E L++ +E+ L FK
Sbjct: 441 VIGIPNEEYGEEIKAYVVLKPGE----------------YIDAETLQKWGKEQ-LASFKY 483
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREV 447
PR +V R+ P+++TGKI + E++ E+
Sbjct: 484 PR-YVEIREHLPMSATGKILKRELKSEL 510
>gi|430807645|ref|ZP_19434760.1| AMP-dependent synthetase/ligase [Cupriavidus sp. HMR-1]
gi|429500076|gb|EKZ98462.1| AMP-dependent synthetase/ligase [Cupriavidus sp. HMR-1]
Length = 518
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 177/389 (45%), Gaps = 59/389 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV+ SH L S++++A E + LH APL H ++ A+ + +
Sbjct: 163 IMYTGGTTGKPKGVMQSHLNLWSSSISRLAQFPLDEATITLHAAPLFHTAAMAKAVGVFV 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
+G H +P F+ LE +E+ V ++ VP ++ A L + S+K+I G
Sbjct: 223 IGGTHTMVPTFDPAEVLETLERERVNDIMLVPTMLQ--AILACPDFARRDVSSLKRINYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ ++ A + P + AYG+TE S ++ V P
Sbjct: 281 ASPINGAVLDAALAAMPNVEFSHAYGLTEASPVVS---------------------VNPP 319
Query: 250 SVHQPQGVC------VGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 298
+ H P+G G+P V +KV V G I+ RG ++M YW+
Sbjct: 320 ANHGPEGRASGLYRSAGRPGFGVFVKVVDPNGDEVPRNTIGEIVVRGPNIMQGYWN---- 375
Query: 299 KPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
KP + + WL TGD +DD G +++V R I +GGENVY EVE L QHP +
Sbjct: 376 KPEETRQALRNGWLHTGDGAYMDDAGYLFIVDRIKDMIVTGGENVYSAEVENALAQHPAV 435
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
V+G+ + R E V A V LR Q E LR HCR +
Sbjct: 436 HSCAVIGVPHERWGEAVHAVVVLRPGLQAGEDE----------------LRTHCRAL-IA 478
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+K P+ V +R PL++ GKI + E+R
Sbjct: 479 SYKCPK-SVEFRTEMPLSAAGKILKRELR 506
>gi|120404947|ref|YP_954776.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
gi|119957765|gb|ABM14770.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
Length = 524
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 187/386 (48%), Gaps = 51/386 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAML 128
+ +T GT+G PKGV+++H L+ ++ +A + LH AP+ H+ L+ + +
Sbjct: 167 VFYTGGTSGHPKGVMLTHDNLMTSAMGALASGFFLTSGGPLLHAAPMFHLADLAIWLEQV 226
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT--LIRVKKTWKGRDSVKKI 186
+ G HVFIP F+ + L+A+++H V+ L+ VP ++ L + V T +++ +
Sbjct: 227 IRGGTHVFIPSFKPEGVLDALQRHRVSDLLLVPTMVQMLVDHPALPVYDT----SALQMV 282
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD---PTLETPGQLPQAF 243
+ GG + + L++ A+ P A + AYGMTE S T ++ D P L G
Sbjct: 283 MYGGSPIAAALLERASKRLPTASFVQAYGMTEVSPIATLLSPRDHDDPVLRRSG------ 336
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLA 298
G APH E+++ + VG I RG HVM YW +
Sbjct: 337 ----------------GVAAPHSEVRIVDEDDVEVPRGDVGEITVRGGHVMAGYWGRPED 380
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ G W+ TGD G +D+ G V++V R I SGGENVY EVE L +HP +
Sbjct: 381 TATALRGG-WMHTGDAGYMDERGYVFVVDRIKDMIVSGGENVYSVEVENALARHPAVAAC 439
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+G+ + R E V A V +E D ++N L E LR+ CR + G+K
Sbjct: 440 AVIGVPDERWGERVHAVV-----VPSAEGGAD--ARN----LDPEELREFCRSL-IGGYK 487
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVR 444
PR V PL++ GK+ + E+R
Sbjct: 488 VPRT-VEVVAALPLSAAGKVLKRELR 512
>gi|56476570|ref|YP_158159.1| ADP-producing CoA ligase, feruloyl-CoA synthetase [Aromatoleum
aromaticum EbN1]
gi|56312613|emb|CAI07258.1| putative ADP-producing CoA ligase,similar to feruloyl-CoA
synthetase [Aromatoleum aromaticum EbN1]
Length = 510
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 184/401 (45%), Gaps = 54/401 (13%)
Query: 55 SLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAP 114
++P P+ ++IC+TSGTTG PKG ++S AL ++ I + DD L T P
Sbjct: 147 AVPRDPQVGPQTPLLICYTSGTTGKPKGALLSQGALAWNAVNSIDLHELSADDRILTTLP 206
Query: 115 LCHIGGLSSAMA-MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV 173
L H+GGL++ L GA V PKF++ + +A+EQ +T + VPA + ++
Sbjct: 207 LFHVGGLNNQTTPALSAGATVVLHPKFDADATFDAIEQERITLTVLVPAQL----EMMIA 262
Query: 174 KKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 231
+ W+ D S++ I G +P L++E L+ YG TET +
Sbjct: 263 RPRWQSADLSSLRMITTGSTIVPERLIREVHRR--GVPLVQIYGSTETCPIAAY------ 314
Query: 232 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGA 286
V P + G G+ APH L++ D V G IL RG
Sbjct: 315 --------------VKPADAQRKAG-SAGRAAPHCSLRIVGDDGHDVKPGATGEILVRGP 359
Query: 287 HVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 346
+VM YW+ A +V + W TGD+G D G +W+ GR+ I SGGEN+YP E+E
Sbjct: 360 NVMNAYWNDLQASAAV-LKDGWFRTGDMGHQDGEGYLWVDGRKKEMIISGGENIYPAEIE 418
Query: 347 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 406
+L + P I + VVG RL E W + + L + VL
Sbjct: 419 NLLGESPDIAEVAVVG--------------RLDERWGEVVVAVVVPLEGRT-LDAGHVL- 462
Query: 407 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 447
E + +K P+ V + P T+ GK+R+D+VR+ V
Sbjct: 463 -QLLEGRIARYKLPKEVVFLDE-LPRTALGKVRKDDVRQLV 501
>gi|453382972|dbj|GAC82634.1| putative fatty-acid--CoA ligase [Gordonia paraffinivorans NBRC
108238]
Length = 551
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 190/404 (47%), Gaps = 47/404 (11%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IG 119
S +P+ AV I +TSGTTG PKG +SH + ++GY DD P H G
Sbjct: 184 SLSPDDAVNIQYTSGTTGFPKGATLSHRNIGNNGYLVGELLGYTADDRICIPVPFYHCFG 243
Query: 120 GLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTW 177
+ +A GA V P F+ ++AL+AVE++ TSL VP + +A+LA L +
Sbjct: 244 MVMGNLAATSHGAAMVIPGPAFDPRAALDAVEKYRCTSLYGVPTMFIAELALLDSAPDGY 303
Query: 178 K-GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
+ S++ + G P +M++ + +++ YGMTETS T + DP
Sbjct: 304 RPDLSSLRTGIMAGSPCPEHVMRQVVDRMHMSEVSICYGMTETSPVSTQTRVDDPLELRV 363
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVML 290
G VG+ PH+E+K+ G + G + TRG VM
Sbjct: 364 G--------------------TVGRVGPHLEIKIIDPTTGETLGRNETGELCTRGYSVMK 403
Query: 291 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 350
YW+ + W+ TGD+ +DD G V + GR + GGEN+YP E+E L
Sbjct: 404 GYWNDPEKTAEAIDADGWMHTGDLAEMDDAGYVRITGRIKDMVIRGGENIYPREIEEFLY 463
Query: 351 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 410
HP I+ V+G+ + + E ++A VRLR+ + D L++E +R
Sbjct: 464 THPDILDAQVIGVPDEKYGEELMAWVRLRD-------HADD--------LTAEDVRAFA- 507
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
E + K PR +V K FP+T TGK+R+ +R E + ++ L
Sbjct: 508 EGKIARHKIPR-YVHVVKEFPMTVTGKVRKVAMREEAIHLIEEL 550
>gi|153839677|ref|ZP_01992344.1| acyl-CoA synthetase [Vibrio parahaemolyticus AQ3810]
gi|149746805|gb|EDM57793.1| acyl-CoA synthetase [Vibrio parahaemolyticus AQ3810]
Length = 513
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 126/388 (32%), Positives = 192/388 (49%), Gaps = 58/388 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG ++ +++ +L I+ DDV+L T PL H G + + A
Sbjct: 172 VILYTSGTTGLPKGAELTQQNIVMNALVAQNIMASQADDVHLVTLPLFHTFGQTVHLNAS 231
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ GA V +P+FE K LE +E+H VT VP + L + V+ + S++ +
Sbjct: 232 VQSGATLVLVPRFEPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNYD-ISSLRVAV 287
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
+GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 288 SGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG---------- 334
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+P VE+KV DG + G I+ RG +VM Y D +P V
Sbjct: 335 ----------SVGQPIQGVEVKVVDLDGHALPVGEEGEIIVRGHNVMKGYLD----RPEV 380
Query: 303 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP + +
Sbjct: 381 TESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVAMVA 440
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+GI + E + A V L+ + Q+ E++ EL L RE+ L FK
Sbjct: 441 VIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LANFKY 483
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREV 447
PR FV R+ P+++TGKI + E++ E+
Sbjct: 484 PR-FVEIREQLPMSATGKILKRELKSEL 510
>gi|403508875|ref|YP_006640513.1| AMP-binding enzyme family protein [Nocardiopsis alba ATCC BAA-2165]
gi|402799440|gb|AFR06850.1| AMP-binding enzyme family protein [Nocardiopsis alba ATCC BAA-2165]
Length = 542
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 190/400 (47%), Gaps = 47/400 (11%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IG 119
+ +P+ + I +TSGTTG PKG +SH ++ + ++GY E D P H G
Sbjct: 182 TLSPDDPINIQYTSGTTGFPKGATLSHHNILNNGFSVGELLGYTEIDRIALPVPFYHCFG 241
Query: 120 GLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
+ +A GAC V P FE +AL+AV+ TSL VPA+ +A L
Sbjct: 242 MVMGNLAATSHGACMVIPGPGFEPATALDAVQAEKCTSLYGVPAMF--IAELALPDFDDY 299
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
+++ + G P E+M++ + A++ YGMTETS ++ T D +LE
Sbjct: 300 DLSTLRTGIMAGSPCPVEVMRQVIDRMGMAEVSICYGMTETSP-VSTQTRRDDSLER--- 355
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRY 292
+ VG+ PH+E+KV + G + TRG VML Y
Sbjct: 356 ----------------RVSTVGRVGPHLEVKVIDPATGVTVPRGTPGELCTRGYSVMLGY 399
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
W++ V W+ TGD+ +D+ G V + GR + GGEN+YP E+E VL H
Sbjct: 400 WNEPDKTAEVIDRGRWMHTGDLAVMDEDGYVGITGRIKDMVIRGGENIYPREIEEVLYTH 459
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P ++ V+G+ + + E ++A VR+RE + L+ E LR C+ +
Sbjct: 460 PDLLDAQVIGVPDQKYGEELMAWVRMREGAE---------------PLTPETLRAFCQGR 504
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ FK PR +V FP+T TGK+R+ ++R E + L
Sbjct: 505 -IAHFKIPR-YVHVVDEFPMTVTGKVRKVQMREESLRLLD 542
>gi|441502995|ref|ZP_20985002.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
gi|441429211|gb|ELR66666.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
Length = 525
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 197/391 (50%), Gaps = 54/391 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSL-AKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-A 126
+I +T+GTTGSPKG V++ S ++ ++ A IVG G +DV+L PL H G ++ M
Sbjct: 172 VILYTAGTTGSPKGAVLTQSNMVCNAMVAANLIVGNG-NDVHLTVLPLFHSFGQTAHMNT 230
Query: 127 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR-----D 181
+M GA + IP+F+ + L +EQH T VP + + ++ K T G
Sbjct: 231 AVMCGATLLMIPRFDPQVVLAQIEQHKATIFAGVPTMYIGM---LQAKATLSGEKNYDIS 287
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ ++GG LP+E+++ F ++ YG++ETS F L PG
Sbjct: 288 SLRLAISGGAPLPAEVIRSFEAEF-DIPILEGYGLSETSPVACFHHL--DAERIPGS--- 341
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQF 296
VG+P VE++V + V G IL RG +VM Y ++
Sbjct: 342 -----------------VGQPVQGVEIRVVDEQGKTVETGQDGEILIRGHNVMKGYLNR- 383
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
+ + S + WL TGDIG D GN+++V R + GG NVYP E+E VL+ HPG+
Sbjct: 384 AEETASSLKDGWLHTGDIGRFDQAGNLFVVDRLKDMVIRGGFNVYPREIEDVLMTHPGVA 443
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
V+GI + ++ E + A V L+++ + +E +Q L+ S+ L
Sbjct: 444 MAAVIGIPDEKVGEEIKAYVVLKDNGESAEKPDEQC-----LIEWSKT--------QLAS 490
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 447
+K PR + +R+ P+++TGKI + E++ E+
Sbjct: 491 YKYPRQ-IEFRQQLPISATGKILKKELKAEL 520
>gi|375140128|ref|YP_005000777.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359820749|gb|AEV73562.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 543
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 189/411 (45%), Gaps = 54/411 (13%)
Query: 58 FTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH 117
H+ + + I +TSGTTG PKG +SH ++ + GY E D P H
Sbjct: 176 IAHTLTADDPINIQYTSGTTGFPKGATLSHHNILNNGFLVGELCGYTEADRICIPVPFYH 235
Query: 118 IGGLSSA-MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVK 174
G+ +A GAC V P FE+++ LEAV TSL VP + +A+LA +
Sbjct: 236 CFGMVMGNLAATSHGACMVIPAPSFEARATLEAVAAERCTSLYGVPTMFIAELA-----E 290
Query: 175 KTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT 232
+ D S++ + G P E+MK+ + ++ YGMTETS T DP
Sbjct: 291 SGFGDFDLASLRTGIMAGSPCPVEVMKQVIDRMGITEITICYGMTETSPVATQTRADDPI 350
Query: 233 LETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGA 286
+ + VG PH+E+K+ + G + TRG
Sbjct: 351 --------------------ERRVSSVGTVHPHLEVKIVDPETGVTVPRGAAGELCTRGY 390
Query: 287 HVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 346
VML YW++ W+ TGD+ +DD G V ++GR + GGEN+YP E+E
Sbjct: 391 SVMLGYWERPDWTAEAIDAARWMHTGDLAVMDDEGYVSIIGRSKDMVIRGGENIYPREIE 450
Query: 347 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 406
L HP I+ V+G+ + R E ++A VR++E + LS+E LR
Sbjct: 451 EFLYTHPHILDAQVIGVPDPRYGEELMAWVRMKEGTE---------------PLSTEALR 495
Query: 407 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 457
C K L +K PR +V FP+T TGK+R+ E+R ++ LK LP +
Sbjct: 496 AFCTGK-LAHYKIPR-YVHVVDEFPMTVTGKVRKVEMRDAAITLLK-LPQD 543
>gi|103487349|ref|YP_616910.1| long-chain-fatty-acid--CoA ligase [Sphingopyxis alaskensis RB2256]
gi|98977426|gb|ABF53577.1| AMP-dependent synthetase and ligase [Sphingopyxis alaskensis
RB2256]
Length = 519
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 197/422 (46%), Gaps = 58/422 (13%)
Query: 39 KRDMLTADILKGYSLRSLPFTHSWAPEGA---VIICFTSGTTGSPKGVVISHSALIV--- 92
+ D + D K +++ ++ P GA V+ +TSGTTG+PKG V+S+ L
Sbjct: 128 EHDPVIVDAAKAWAMIEGAARTAFDPSGANDAVLQLYTSGTTGNPKGAVLSNRNLFALRK 187
Query: 93 -QSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQ 151
S + + +D+ L P HIGG + L G + + +F + +AVEQ
Sbjct: 188 HSSTLDLPYTRWDDDEAVLVAMPCAHIGGTGLGIMALAAGLPGIVLAEFNPEGVFDAVEQ 247
Query: 152 HCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI 211
H VT VPA + L L+ + T +K IL G +P EL+++ F A+ I
Sbjct: 248 HGVTRFFMVPAALQML--LMHPRCTSVDYSRLKYILYGAAPIPLELLRQCIQVF-GAQFI 304
Query: 212 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG----VCVGKPAPHVE 267
AYGMTET+ +++ + P H P G GK P VE
Sbjct: 305 QAYGMTETTGTISML---------------------PPEDHDPAGNKRMRSAGKALPGVE 343
Query: 268 LKVC-SDG----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 322
++V +DG + VG ++TR ++ ML YW+ A + T + W+ TGD G +D+ G
Sbjct: 344 IRVVDADGNPLPTGEVGEVVTRSSNNMLGYWNLPDATANTMTDDGWIRTGDAGYLDEDGY 403
Query: 323 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 382
+++ R I +GGENVYP EVE+ + HP + + V+GI +A+ E V A V +
Sbjct: 404 LFIHDRMKDMIITGGENVYPAEVESAIFGHPAVQEVAVIGIPDAKWGESVKAVVVAKPGA 463
Query: 383 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 442
+ E++ + RE+ + FK PR + P ++GKI R +
Sbjct: 464 RIEEAD----------------IIAWARER-IAPFKCPRSIDVI-DALPRNASGKILRKD 505
Query: 443 VR 444
+R
Sbjct: 506 LR 507
>gi|374621345|ref|ZP_09693879.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
gi|374304572|gb|EHQ58756.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
Length = 517
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 183/381 (48%), Gaps = 43/381 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV+ SH A+ + + + G G+ YLH AP+ H+ + MA +
Sbjct: 164 IFYTGGTTGFPKGVMQSHWAIWASGMGSLPMFGMGQSSRYLHVAPMFHMADFAGGMAATL 223
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
A +V + F+ + E + +T + VPA++ L L S++KI+ G
Sbjct: 224 SAARNVVMQSFDPTAVYETIADEEITHALLVPAMIKML--LDHPNAATADMSSMEKIMYG 281
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+P+ ++ +P L+ AYG TE + T ++ D +A G + +
Sbjct: 282 ASPMPAATLERCMELWPHIGLVQAYGQTELAPIATMLSPED---------HRAGGQILKS 332
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVST 304
+ G+P P +++V SD G ++ RG H M+ YW++ A+ +
Sbjct: 333 A---------GRPTPINDVRVVSDEGDDCAVGESGEVVVRGPHTMMGYWNK-PAETEKAL 382
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
+ W+ TGD G D+ G +++V R + +GGENV+ EVE L+ H + + V+GI
Sbjct: 383 KDGWVYTGDAGLFDENGYLYIVDRLKDMVVTGGENVFTTEVENALISHDAVQDVSVIGIP 442
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ E V A V L + +S+ +EL+ HCR ++ G+K P+ F
Sbjct: 443 HEEWGEAVHAIVIL---------HAGESAGEEELV-------AHCR-ASIAGYKVPKGFT 485
Query: 425 LWRKPFPLTSTGKIRRDEVRR 445
+P PL+ GK+ + E+R+
Sbjct: 486 FRNEPMPLSGAGKVLKTELRK 506
>gi|359424226|ref|ZP_09215348.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
gi|358240500|dbj|GAB04930.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
Length = 515
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 199/419 (47%), Gaps = 67/419 (15%)
Query: 50 GYSLRSLPFTHSWAPEGAVI------------ICFTSGTTGSPKGVVISHSALIVQSLAK 97
G S+ LP A +G VI + +T GTTG +GVV+SH+A++ +L
Sbjct: 134 GESVDGLPSIDQMATDGPVIADAHRCGDQPLGLFYTGGTTGRSRGVVLSHNAVVTSALGF 193
Query: 98 IAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSL 157
A+ G + V + +APL H+ S +A +VGA V +P F+ + + ++ H +T
Sbjct: 194 AAMRTIGTESVCMVSAPLFHLAQFSGWVAAALVGATQVVLPAFDPVAVMRLIQDHRITRA 253
Query: 158 ITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 217
+ VP ++ A L K S++ ++ GG + + A P A + YGMT
Sbjct: 254 VLVPTMLH--AVLNHPKAGDFDLSSLETVVYGGSPIAQATLDHAREFLPAAGFLQVYGMT 311
Query: 218 ETSSSLTFMTLYDPTLETPGQLPQA-FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS 276
E ++ +T + LP+ G++T ++ G+ APH ++V GS
Sbjct: 312 EMAAVVTTL------------LPEDHVGDLTKSA---------GRAAPHALIRVLDPGSG 350
Query: 277 H------VGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVG 327
VG ++ +GA++M YW +P + G + WL TGD G +D+ G +++V
Sbjct: 351 RELPIGSVGEVVVQGANMMTEYWR----RPEETAGVIRGGWLHTGDAGYLDERGYLFIVD 406
Query: 328 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 387
R I SGGENVY EVE + +HP + + V+G+ + + E V A V LR
Sbjct: 407 RVKDMIVSGGENVYSVEVENAVAKHPAVSQVAVIGVPDDKWGERVHAIVVLR-------- 458
Query: 388 NCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
E+ L L+ CR+ + G+K PR + P++ GKI + ++R+E
Sbjct: 459 --------PEMSLELGELQNSCRQ-TIAGYKCPRSMTVV-DSLPISPAGKILKRDLRKE 507
>gi|372269916|ref|ZP_09505964.1| AMP-binding domain protein [Marinobacterium stanieri S30]
Length = 562
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 187/393 (47%), Gaps = 47/393 (11%)
Query: 67 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAM 125
A+ I +TSGTTG PKG +SH ++ +G+ +D + PL H G + +
Sbjct: 205 AINIQYTSGTTGFPKGATLSHHNILNNGFFVAESMGFTSEDRLVIPVPLYHCFGMVMGNL 264
Query: 126 AMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ GA ++ + FE S L+AV T+L VP + +A L + +++
Sbjct: 265 GCVTHGATMIYPDEGFEPTSVLKAVHSQKATALYGVPTMF--IAELDHPEFESFDLSTLR 322
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P+E+MK+ N +++ AYGMTETS T
Sbjct: 323 TGIMAGSICPTEVMKQVINKMNMSEVQIAYGMTETSPVST-------------------- 362
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 298
N + + VG+ PH+E KV G+ + G + TRG VML+YW+ A
Sbjct: 363 QTGANDSIEKRVSTVGRTQPHLESKVVDPGTGQIVPRGEIGELCTRGYSVMLKYWNNEHA 422
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
W+ TGD+ ++DD G + +VGR + GGENVYP+E+E L HP + +
Sbjct: 423 TADAIDEAGWMHTGDLATMDDEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYTHPAVSEV 482
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V G+ + + E ++A ++L + +S+E LR+ C+ K +T FK
Sbjct: 483 QVTGVPDKKYGEELIAWIKLHGDAEE---------------VSAEDLREFCKGK-ITHFK 526
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
PR F ++ FP+T TGKI++ ++R ++ L
Sbjct: 527 IPRYFKFVQE-FPMTVTGKIQKFKMREISIAEL 558
>gi|432340355|ref|ZP_19589799.1| AMP-binding acyl-CoA synthetase [Rhodococcus wratislaviensis IFP
2016]
gi|430774636|gb|ELB90220.1| AMP-binding acyl-CoA synthetase [Rhodococcus wratislaviensis IFP
2016]
Length = 515
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 189/387 (48%), Gaps = 54/387 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIA-----IVGYGEDDVYLHTAPLCHIGGLSSA 124
I +T GT+G PKGV+++H L+ SL +A + G L +AP+ H+ L+S
Sbjct: 163 IFYTGGTSGRPKGVMLTHLNLMTASLGSLAANHTAVAG----SRALLSAPMFHLAALASW 218
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ G V +P FE +AL +E+ + S++ VP ++ L L ++ + S+
Sbjct: 219 NGQNIAGGILVMLPSFEPAAALRLIEERRINSMLLVPTMIQML--LRHPEREIRDLSSIT 276
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
I G + L+++A +FPKA + YGMTE LT ++ D T +L A
Sbjct: 277 AIQYGASPISETLLRQAQRAFPKADFVQGYGMTEAGPGLTSLSADDHHAAT--RLNSA-- 332
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAK 299
G+P HVE++V D + VG I+ RG ++M YW++ +
Sbjct: 333 ---------------GRPMGHVEVRVVDDRGNELPRGEVGEIIARGGNIMTGYWNR-PEE 376
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ + + WL TGD G +D+ G +++V R I SGGENVY EVE L HP ++
Sbjct: 377 TAAALRDGWLYTGDGGYMDEDGYLFVVDRLKDMIISGGENVYSTEVENALASHPDVVQCA 436
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+G+ + R E V A + ++ + CD +R H + K + G+K+
Sbjct: 437 VIGVPDDRFGERVHAFLVMKPG---TSLTCDD-------------VRAHAK-KLIAGYKS 479
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRRE 446
PR + + P++ GKI + E+RR+
Sbjct: 480 PRSITIVEQ-MPVSPAGKILKRELRRQ 505
>gi|256393520|ref|YP_003115084.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
gi|256359746|gb|ACU73243.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
Length = 506
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 182/400 (45%), Gaps = 61/400 (15%)
Query: 59 THSWAPEGA---VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPL 115
T AP A ++ +TSGTTG PKG ++H L + + G DDV L PL
Sbjct: 153 TGDIAPTNADDTAVVLYTSGTTGKPKGAELTHFQLYMNCTVSGDLFGIRPDDVSLAVLPL 212
Query: 116 CHIGGLSSAMAMLMVGA-CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVK 174
H+ GLSS + + + A +P+FE + L+A+E+H T VP + L+
Sbjct: 213 FHVFGLSSVLNVAVRNAGTMALVPRFEIEPVLDAMEKHRCTIFSGVPTMYF---ALLHAD 269
Query: 175 KTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 234
+ +++ +GG +P E+++ FP ++ YG++E++S+ TF
Sbjct: 270 TAERDLSALRVGCSGGAPIPGEVIRAFEEKFPGVVILEGYGLSESASTTTF--------- 320
Query: 235 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-------SHVGRILTRGAH 287
N+ S Q + +GKP VE +V D HVG I+ RG +
Sbjct: 321 ----------NI---SAEQRKVGSIGKPVWGVETRVVDDAGRTLPPRPEHVGEIVIRGHN 367
Query: 288 VMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEE 344
+M YW P + V W TGD+G D+ G ++V R+ + GG NVYP E
Sbjct: 368 MMKGYW----GNPEATAEAVRDGWFHTGDLGYADEDGYFYIVDRKKDMVIRGGFNVYPRE 423
Query: 345 VEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEV 404
VE VL HP I V+G A+ RL E VVA V L+ E +
Sbjct: 424 VEEVLYTHPAIAEAAVIGRADERLGEEVVAYVALKAGAHADEQD---------------- 467
Query: 405 LRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+ CR++ + +K PR V + P+ TGKI + E+R
Sbjct: 468 VIAFCRDR-MAPYKYPRE-VRFLSALPVGPTGKILKKELR 505
>gi|389875794|ref|YP_006373529.1| AMP-dependent synthetase and ligase [Tistrella mobilis
KA081020-065]
gi|388530749|gb|AFK55945.1| AMP-dependent synthetase and ligase [Tistrella mobilis
KA081020-065]
Length = 557
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/436 (31%), Positives = 205/436 (47%), Gaps = 51/436 (11%)
Query: 20 IPSLRWHVSLGSSSSDFVNKRDML-TADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
+P L + + LG S + + AD +L ++ + P+ + I FTSGTTG
Sbjct: 155 LPDLEFVIPLGKSRGAMIGFETLTGFADAAARTTLDAI--IPTLRPDDPINIQFTSGTTG 212
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 137
SPKG ++H+ ++ L I+G+ E D PL H G+ S +A + GA VF
Sbjct: 213 SPKGATLTHNNILNNGLFVGRIMGFTEADRLCIPVPLYHCFGMVLSVLACITHGATMVFP 272
Query: 138 PK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 196
+ FE ++ LEAV+ T+L VP + L K +++ + G P E
Sbjct: 273 SEAFEPRATLEAVQAERCTALHGVPTMFITELALPDFKSF--DLSTLRTGIMAGAPCPIE 330
Query: 197 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 256
M+E ++ YGMTETS ++F T D LET +
Sbjct: 331 TMREVIAKMNMREVTICYGMTETSP-VSFQTRADADLETRTE------------------ 371
Query: 257 VCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQFLAKPSVSTGEVWL 309
VG P VE+++ DG V G + TRG VM YW D+ + +++ G W+
Sbjct: 372 -TVGTIHPFVEVRIV-DGDDRVVPVGTVGELHTRGYSVMAGYWNDEARTRDAIAPGG-WM 428
Query: 310 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 369
TGD+G ID+ G +VGR I GGEN+YP E+E L+ HPGI+ + V GIA+A+
Sbjct: 429 RTGDLGVIDERGRCRIVGRSKDMILRGGENIYPVEIENFLITHPGILDVAVFGIADAKYG 488
Query: 370 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 429
E V A W N D SS + +L C E + FK PR + + +
Sbjct: 489 EQVCA-------WIRRADNPDGSSLTEAAVLG------FC-EGRIAHFKIPRR-IRFVED 533
Query: 430 FPLTSTGKIRRDEVRR 445
P+T TGKI++ +R+
Sbjct: 534 MPMTVTGKIQKFLMRQ 549
>gi|403725356|ref|ZP_10946493.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
gi|403205107|dbj|GAB90824.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
Length = 528
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 182/387 (47%), Gaps = 41/387 (10%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ + + +TSGTTG PKG +++H +L + A G+ V + PL H+GG S
Sbjct: 168 PDASFLQLYTSGTTGHPKGAMLTHRSLGAHNAAAAVGFGFTPSSVNMVAMPLFHVGGSSW 227
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
++A + VGA + + + + L+ + + VT VPA+ RV + +V
Sbjct: 228 SLAGISVGAQTIVVRDVDPSAVLDEIVERKVTHAFFVPAVFGFFLEEPRVAD--RDYSAV 285
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + GG +P M+ ++P A YGMTE S + + D
Sbjct: 286 RCLGYGGSPMPLPTMRACLETWPDADFYQVYGMTEMSGVFSVLGPEDHR----------- 334
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLA 298
+ H + V G+P P V + V DG++ +G + ML YW A
Sbjct: 335 -----DLAHPERLVSAGRPLPGVTVTVVDRDGNALAPGSIGEFWVQSKQHMLGYWGNPEA 389
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
G+ WL TGD G +DD G +++ R I SGGEN+YP EVE V++++P + +
Sbjct: 390 TSKTLVGDDWLRTGDAGLLDDDGYLYISDRVKDMIISGGENIYPAEVERVIIENPAVADV 449
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+G+ + + E V A V L + D S+ + EL+ +CRE+ L G+K
Sbjct: 450 AVIGVPDEKWGETVKAVVVLAD---------DASTTDVELI-------AYCRER-LAGYK 492
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRR 445
P+ V + P STGKI + E+R+
Sbjct: 493 TPKS-VEFLSALPRNSTGKILKRELRK 518
>gi|417319509|ref|ZP_12106067.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
10329]
gi|328474699|gb|EGF45504.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
10329]
Length = 513
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 192/388 (49%), Gaps = 58/388 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG ++ +++ +L I+ DDV+L T PL H G + + A
Sbjct: 172 VILYTSGTTGLPKGAELTQQNIVMNALVAQNIMASQADDVHLVTLPLFHTFGQTVHLNAS 231
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ GA V +P+F+ K LE +E+H VT VP + L + V+ + S++ +
Sbjct: 232 VQSGATLVLVPRFDPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNYD-ISSLRVAV 287
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
+GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 288 SGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG---------- 334
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+P VE+KV DG + G I+ RG +VM Y D +P V
Sbjct: 335 ----------SVGQPIQGVEVKVVDLDGHALPVGEEGEIIVRGHNVMKGYLD----RPEV 380
Query: 303 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP + +
Sbjct: 381 TESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVAMVA 440
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+GI + E + A V L+ + Q+ E++ EL L RE+ L FK
Sbjct: 441 VIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LANFKY 483
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREV 447
PR FV R+ P+++TGKI + E++ E+
Sbjct: 484 PR-FVEIREQLPMSATGKILKRELKSEL 510
>gi|296139574|ref|YP_003646817.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
gi|296027708|gb|ADG78478.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
Length = 506
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 190/395 (48%), Gaps = 56/395 (14%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIG 119
H A + ++ +TSGTTG PKG ++H L + + G DV L PL H+
Sbjct: 155 HPTASDDTAVLLYTSGTTGRPKGAELTHFELYMNCTVAPQLFGMTAADVALGVLPLFHVF 214
Query: 120 GLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
GLSS + A + G +P+FE+ + L+ +E+ VT L VP + L +
Sbjct: 215 GLSSVLNAAVRYGGSVALVPRFEAAAVLDVMERRRVTVLSGVPTMYVAL-----LGAGPG 269
Query: 179 GRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
GRD +++ ++GG +P +++ +F ++ YG++ET+S+ TF
Sbjct: 270 GRDLSALRAAVSGGASIPGGVLRGFEEAFGGIAVLEGYGLSETASTATF----------- 318
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-------GSSHVGRILTRGAHVM 289
N+ S Q + + +GKP V++++ G +HVG +L RG +VM
Sbjct: 319 --------NI---SADQRKVLSIGKPIWGVQMRIVDPDGVELPPGDAHVGEVLVRGHNVM 367
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
Y+ + A + + + WL TGD+G D+ G ++V R + GG NVYP E+E VL
Sbjct: 368 KGYYKRPEAT-AEALRDGWLHTGDLGYRDEDGYFFIVDRLKDLVIRGGYNVYPREIEEVL 426
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
HP ++ VVG + RL E V A V LR S D +E L
Sbjct: 427 YTHPDVVEAAVVGRPDERLGEEVEAFVVLRPG-----SATD-----------TEALTAFA 470
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
RE+ L +K PR FV+ + P +TGKI + E+R
Sbjct: 471 RER-LAAYKYPRSFVILPE-LPKGATGKILKRELR 503
>gi|89092350|ref|ZP_01165304.1| acyl-CoA synthase [Neptuniibacter caesariensis]
gi|89083438|gb|EAR62656.1| acyl-CoA synthase [Oceanospirillum sp. MED92]
Length = 562
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 205/459 (44%), Gaps = 69/459 (15%)
Query: 6 ESSDSWYLELQHTAIPSLRWHVSLGSSS-------SDFVNKRDMLTADILKGYSLRSLPF 58
E D+ EL +P+L+ ++L +DFV + + L+ L F
Sbjct: 143 ELKDAEEGELNSAKLPNLKGIINLAEEKHAGMWRWADFVEMAEKIDMSQLERIQ-SELQF 201
Query: 59 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH- 117
+ + I +TSGTTG PKG +SH ++ + + E D + PL H
Sbjct: 202 ------DDPINIQYTSGTTGFPKGAALSHHNILNNGFFVAESMNFTEKDRLVIPVPLYHC 255
Query: 118 IGGLSSAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
G + + + GA ++ FE KS LEAV + T+L VP + +A +
Sbjct: 256 FGMVMGNLGCITHGATMIYPDDAFEPKSVLEAVAEERATALYGVPTMF--IAEMDHPDFD 313
Query: 177 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
S++ + G P E+MK + ++ AYGMTETS T DP
Sbjct: 314 QYDVSSLRTGIMAGAICPEEVMKAVNSKLHMKEVQIAYGMTETSPVSTQTAADDP----- 368
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVML 290
+ Q VG+ PH+E K+ S +V G + TRG VML
Sbjct: 369 ---------------FEKQVTTVGRTQPHLETKIVDPASGNVVARGEVGELCTRGYSVML 413
Query: 291 RYWDQFLAKPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 346
+YW+ P + G + W+ TGD+ ++D+ G + +VGR + GGENVYP+E+E
Sbjct: 414 KYWNN----PEATAGAIDNGGWMHTGDLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIE 469
Query: 347 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 406
L HP I + V G+ + + E +VA V+L D+ ++ E L+
Sbjct: 470 EFLYTHPSISDVQVTGVPDKKYGEELVAWVKLA-------PGADE--------VTEEELK 514
Query: 407 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
C+ K +T FK PR F + FP+T TGKI++ ++R
Sbjct: 515 AFCKGK-ITHFKIPRYFK-FTDDFPMTVTGKIQKFKMRE 551
>gi|389819498|ref|ZP_10209366.1| long-chain-fatty-acid--CoA ligase [Planococcus antarcticus DSM
14505]
gi|388463296|gb|EIM05660.1| long-chain-fatty-acid--CoA ligase [Planococcus antarcticus DSM
14505]
Length = 563
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 194/406 (47%), Gaps = 62/406 (15%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSL---AKIAIVGYGEDDVYLHTAPLCHIGGL 121
E ++ +T GTTGSPKGV+++H +I + + + GE+ + + PL H+ GL
Sbjct: 206 EDLALLQYTGGTTGSPKGVMLTHKNIISNATMCDSWLYKCKKGEETI-MGIIPLFHVYGL 264
Query: 122 SSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
++ + + +M+G V +PKF+ ++AL+ + + T P + L + K
Sbjct: 265 TTVLILSVMLGNKMVLLPKFDPETALKTINKQKPTLFPGAPTLYIGLMNHPNIAKY--DL 322
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
S++ L+G LP+E+ +E KL+ YG+TETS +T L
Sbjct: 323 SSIEACLSGSAPLPAEV-QEKFEELTGGKLVEGYGLTETSP-VTHSNL------------ 368
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWD 294
+G T S+ G P P + K+ G+ +G I +G VM YW
Sbjct: 369 -VWGERTKGSI--------GLPYPDTDCKIFQTGTMDTVPNGEIGEIAVKGPQVMKGYWK 419
Query: 295 QFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
KP + + WL TGD+G +DD G+ ++V R+ I +GG N+YP E+E VL +
Sbjct: 420 ----KPEETAATIVDGWLLTGDLGYMDDEGHFFIVDRKKDMIIAGGFNIYPREIEEVLYE 475
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
H I VV GI + E V A + L+E + +E E L HCRE
Sbjct: 476 HEAIQECVVAGIPDPYRGETVKAYIVLKEGYTVTE----------------EELNTHCRE 519
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKI-RRDEVRREVMSHLKSLPS 456
+ L FK PR++ +RK P T+ GKI RR V EV K++PS
Sbjct: 520 Q-LASFKVPRIYE-FRKELPKTAVGKILRRSLVDEEVAKQSKAVPS 563
>gi|88704664|ref|ZP_01102377.1| long-chain-fatty-acid CoA ligase [Congregibacter litoralis KT71]
gi|88700985|gb|EAQ98091.1| long-chain-fatty-acid CoA ligase [Congregibacter litoralis KT71]
Length = 518
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 179/384 (46%), Gaps = 47/384 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG PKGV++S AL +L+ + Y DVYLH P+ H+ + + A
Sbjct: 163 LYYTGGTTGFPKGVMLSQQALWFNNLSVSSGSSYQMGDVYLHAGPMFHLADGAFSGAACT 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR-DSVKKILN 188
G CH F+P F+ ++ +E VT + VP + L L+ GR +++ +
Sbjct: 223 NGLCHTFLPSFDLSKVMDLLEAEKVTHTLMVPTM---LGMLVNHPDFDPGRLSALRSVAY 279
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP--GQLPQAFGNV 246
G +P LM P + YG TE + +T + + TLE P G++ A
Sbjct: 280 GASPMPEGLMHTLLERLPNIGWMQGYGQTEMAPIITLLPAENHTLEGPNAGKMRSA---- 335
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCS-DG----SSHVGRILTRGAHVMLRYWDQFLAKPS 301
G+ AP VE+++C DG + VG I+ R M YW++ +
Sbjct: 336 -------------GRAAPGVEVRICDEDGKDLPNGEVGEIVARAPGSMSGYWNRPEQTEA 382
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+G W+ TGD DD G +++V R I +GGENV+ EVE + HP + + V+
Sbjct: 383 TLSGG-WVKTGDGAYRDDDGFIFIVDRLKDMIVTGGENVFSAEVENAVSTHPAVAAVSVI 441
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI + R E V A V L+E QS +EL+ +H + +K PR
Sbjct: 442 GIPDERWGEAVHAIVILQEG---------QSVTVEELI-------EHTH--TIANYKRPR 483
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRR 445
+PFPL+ GKI + E+R+
Sbjct: 484 SISFRDEPFPLSGAGKILKTELRK 507
>gi|296164101|ref|ZP_06846720.1| feruloyl-CoA synthetase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295900541|gb|EFG79928.1| feruloyl-CoA synthetase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 517
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 186/388 (47%), Gaps = 56/388 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDV-YLHTAPLCHIGGLSSAMAML 128
+ +T GTTG PKGV++SH+ L+ L +++ + + LH APL H+ L++
Sbjct: 163 VFYTGGTTGLPKGVMLSHANLMTSVLGMLSVGSFLSSEARLLHVAPLFHLADLAAWAGQT 222
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+G HV + FE + L+ +E+H VT ++ VP ++ + V+ S++ ++
Sbjct: 223 TLGGTHVMLSTFEPSAILQTIERHQVTDVLLVPTMLQMVVDHPAVRD--YDLSSLRNVMY 280
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G + ++ A + A+ + YGMTE S T + D E P L A
Sbjct: 281 GASPISEAVLSRAMKTVRSARFMQGYGMTELSPLATVLRPEDH--EHPDLLRSA------ 332
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
G+ AP E+K+ V G I+ RG +VML YW+ KP +
Sbjct: 333 -----------GRAAPCAEVKIVDADDKEVPPGNTGEIVVRGGNVMLGYWN----KPDET 377
Query: 304 TGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+ W+ TGD G +D+ G V++V R I SGGENVY EVE VL +HP + V
Sbjct: 378 AAALRNGWMHTGDAGYMDERGYVFVVDRIKDMIISGGENVYSTEVENVLSRHPEVAACAV 437
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+A+ E V A V L E+ +++E LR C+ + + G+KAP
Sbjct: 438 IGVADENWGERVHAVVVLTENSS----------------VTAEELRDFCKTQ-IAGYKAP 480
Query: 421 RL--FVLWRKPFPLTSTGKIRRDEVRRE 446
R FV PL+ GK+ + E+R++
Sbjct: 481 RTASFV---DALPLSGAGKVLKRELRKQ 505
>gi|398866547|ref|ZP_10622035.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
gi|398240252|gb|EJN25938.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
Length = 522
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 184/387 (47%), Gaps = 49/387 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV++SHS + ++A + + YG D V+LH P+ H+ ++ A+
Sbjct: 163 IFYTGGTTGFPKGVMLSHSNVAFSAMATLNMGTYGADAVFLHVMPMFHLADFAAMTALFF 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKIL 187
G HV +P F ++ LE +EQ ++ ++ P ++ L + S+ I
Sbjct: 223 SGGTHVVLPSFIPQTVLETIEQERISEILLAPTMIQMLLDCRDKHPQLASLELGSLTAIG 282
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G + L+ A +FP A YGMTE + T + + E Q G +
Sbjct: 283 YGASPITPVLLDRAREAFPAAGFFQGYGMTELAPMATSL-----SAEYHCQAHHDSGKM- 336
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSV 302
G+PA VE+++ + VG I+ RG +VML Y L KP
Sbjct: 337 ---------YSAGRPAICVEVRIVDVHDNEVPRGTVGEIIVRGPNVMLGY----LNKPQ- 382
Query: 303 STGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
T E W+ TGD G +D+ G +++ R I SGGEN+Y EVE + HP + I
Sbjct: 383 ETAEALRNGWMHTGDGGYMDEDGFIYVCDRLKDMIVSGGENIYSAEVETAIASHPAVAQI 442
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
+GI ++ E V A + L+ +++ ++++ HCRE+ + G+K
Sbjct: 443 AAIGIPCSKWGETVHAVIVLKPG---------EAATGEDII-------AHCRER-IAGYK 485
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRR 445
PR V +R PL+S GK+ + E+R+
Sbjct: 486 CPR-SVEFRDALPLSSVGKVLKTELRK 511
>gi|227205702|dbj|BAH56668.1| putative acyl-CoA synthetase [Rhodococcus sp. HI-31]
Length = 500
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 195/409 (47%), Gaps = 60/409 (14%)
Query: 56 LPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPL 115
LP + A + ++ +TSGTTG+PKG ++HS + + +A++ ++DV L P
Sbjct: 141 LPEVTARADDDTAVLLYTSGTTGAPKGAQLTHSNMYRNATTFVAMLDIRKEDVVLGCLPF 200
Query: 116 CHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVK 174
H G S+A+ A L GAC +P+FE+ + + +E+H VT VP + +L+
Sbjct: 201 FHAFGQSNALNASLAAGACVSLVPRFEAVAVVRLIERHRVTVFEGVPTMYV---SLLHAD 257
Query: 175 KTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 234
+ S++ ++GG LP E++ +F A ++ YG++ETS + TF
Sbjct: 258 LSEADTSSLRICISGGAALPIEVLNGFQGAF-GAPILEGYGLSETSPTATF--------- 307
Query: 235 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK-VCSDGSS----HVGRILTRGAHVM 289
N + + + +G P VELK V DG+ VG I+ RG +VM
Sbjct: 308 --------------NRIGKSKPGSIGLPIDGVELKLVARDGTETLPGEVGEIVIRGHNVM 353
Query: 290 LRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 346
YW +P + + W TGD+ + D+ G ++V R+ I GG NVYP E+E
Sbjct: 354 KGYWK----RPDATAAAIVDGWFHTGDMATRDEDGFYFIVDRKKDIIIRGGYNVYPREIE 409
Query: 347 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 406
VL +HP + + V+G+ + E V A + LR + + E LR
Sbjct: 410 EVLYEHPAVREVAVIGLPHPTYGEEVAAAITLRPGAE----------------ATPEELR 453
Query: 407 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLP 455
Q+ + + + +K PR L K P +TGKI + E+ + +HL P
Sbjct: 454 QYVKSR-VAAYKYPRHVWLADK-LPKGATGKILKREI--GIPAHLLEQP 498
>gi|433658071|ref|YP_007275450.1| Long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus BB22OP]
gi|432508759|gb|AGB10276.1| Long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus BB22OP]
Length = 513
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 192/388 (49%), Gaps = 58/388 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG ++ +++ +L I+ DDV+L T PL H G + + A
Sbjct: 172 VILYTSGTTGLPKGAELTQQNIVMNALVAQNIMASQADDVHLVTLPLFHTFGQTVHLNAS 231
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ GA V +P+F+ K LE +E+H VT VP + L + V+ S++ ++
Sbjct: 232 VQSGATLVLVPRFDPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNCD-ISSLRVVV 287
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
+GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 288 SGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG---------- 334
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+P VE+KV DG + G I+ RG +VM Y D +P V
Sbjct: 335 ----------SVGQPIQGVEVKVVDLDGHALAVGEEGEIIVRGHNVMKGYLD----RPEV 380
Query: 303 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP + +
Sbjct: 381 TESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVAMVA 440
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+GI + E + A V L+ + Q+ E++ EL L RE+ L FK
Sbjct: 441 VIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LANFKY 483
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREV 447
PR FV R+ P+++TGKI + E++ E+
Sbjct: 484 PR-FVEIREQLPMSATGKILKRELKSEL 510
>gi|410611684|ref|ZP_11322777.1| fatty-acyl-CoA synthase [Glaciecola psychrophila 170]
gi|410168723|dbj|GAC36666.1| fatty-acyl-CoA synthase [Glaciecola psychrophila 170]
Length = 519
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 181/381 (47%), Gaps = 40/381 (10%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV++SH+ V +A + E+ +YLH AP+ HI L A+
Sbjct: 163 IFYTGGTTGFPKGVMLSHTNFYVGGVANAHELNMQEETIYLHAAPMFHIADLIWFSAVTF 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
+ HV IP F L A+E+H + ++ VP ++ + ++ +T S+++I G
Sbjct: 223 MAGTHVVIPMFTPDGTLAAIEKHKPSQVLLVPVMLQMVMQSDKLAQT--DVSSLRQIAYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP--GQLPQAFGNVT 247
+ ++ +A FP I A+G TE S + ++ LE P G+L
Sbjct: 281 ASPITQSVLVDAFKKFPNTSFIQAFGQTELSPIASVLSEEYHVLEGPKAGKL-------- 332
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
S +P VC + V+ + VG+I +G ML YW+ KP V+ +
Sbjct: 333 -RSAGRPTRVCEVRI---VDANMLEVPRGDVGQITVKGPTTMLGYWN----KPEVTAETI 384
Query: 308 ---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
W+ TGD G +D+ G ++L+ R I SGGENVY EVE + QHP + V+GI
Sbjct: 385 RDGWVLTGDAGYMDEDGFIFLMDRVKDMIVSGGENVYSAEVENAIGQHPAVATSAVIGIP 444
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ + E V A V L + ++++ L+ HC + G+K P
Sbjct: 445 SEQWGESVHALVILHPGIE----------------VTAQALQSHCHTL-IAGYKCPHSIE 487
Query: 425 LWRKPFPLTSTGKIRRDEVRR 445
+PFPL+ K+ + E+R+
Sbjct: 488 FTTEPFPLSGANKVLKTELRK 508
>gi|119478013|ref|ZP_01618113.1| putative long-chain-fatty-acid CoA ligase [marine gamma
proteobacterium HTCC2143]
gi|119448926|gb|EAW30168.1| putative long-chain-fatty-acid CoA ligase [marine gamma
proteobacterium HTCC2143]
Length = 517
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 177/383 (46%), Gaps = 49/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV+ SH A+ ++ VG + YLH AP+ H+ + +M L+
Sbjct: 164 IFYTGGTTGFPKGVMQSHKAIWASAIGMFPSVGMNQTHCYLHAAPMFHMADFAGSMNTLL 223
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G H F+ F++ L+ VT + VPA++ L K R ++KI G
Sbjct: 224 AGGSHAFVAGFDAGLVLKIFSDWKVTHTLIVPAMVKMLLAHPDAGKADLSR--LEKITYG 281
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+P+ L+ +A +P+ AYG TE + +T + D + G++ +
Sbjct: 282 ASPMPAALLSDAMRLWPQVGFTQAYGQTEMAPVITTLNAED---------HRKGGDILKS 332
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVST 304
+ G+P P E+++ + V G ++ +G H ML YW+ KP +
Sbjct: 333 A---------GRPTPVSEVRLLDSDDNDVELGVQGEVVVKGPHAMLGYWN----KPDETA 379
Query: 305 GEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ W+ TGD G D G +++V R I +GGENV+ EVE L+ H + + V+
Sbjct: 380 KALVDGWVYTGDAGIFDASGYLYIVDRVKDMIITGGENVFTTEVENALISHDAVQDVAVI 439
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI + EMV V L + SE+ L HCR K++ G+K P+
Sbjct: 440 GIPHDEWGEMVHGIVILVAGMEVSEA----------------ALIGHCR-KSIAGYKCPK 482
Query: 422 LFVLWRKPFPLTSTGKIRRDEVR 444
+P PL+ GK+ + E+R
Sbjct: 483 SISFREQPLPLSGAGKVLKTELR 505
>gi|94314746|ref|YP_587955.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
gi|93358598|gb|ABF12686.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
Length = 518
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 176/389 (45%), Gaps = 59/389 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV+ SH L S++++A E + LH APL H ++ A+ + +
Sbjct: 163 IMYTGGTTGKPKGVMQSHLNLWSSSISRLAQFPLDEATITLHAAPLFHTAAMAKAVGVFV 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
+G H +P F+ LE +E+ V ++ VP ++ A L + S+K+I G
Sbjct: 223 IGGTHTMVPTFDPAEVLETLERERVNDIMLVPTMLQ--AILACPDFARRDVSSLKRINYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ ++ A + P + AYG+TE S ++ V P
Sbjct: 281 ASPINGAVLDAALAAMPNVEFSHAYGLTEASPVVS---------------------VNPP 319
Query: 250 SVHQPQGVC------VGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 298
+ H P G G+P V +KV V G I+ RG ++M YW+
Sbjct: 320 ANHGPVGRASGLYRSAGRPGFGVFVKVVDPNGDEVPRNTIGEIIVRGPNIMQGYWN---- 375
Query: 299 KPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
KP + + WL TGD +DD G +++V R I +GGENVY EVE L QHP +
Sbjct: 376 KPEETRQALRNGWLHTGDGAYMDDAGYLFIVDRIKDMIVTGGENVYSAEVENALAQHPAV 435
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
V+G+ + R E V A V LR Q E LR HCR +
Sbjct: 436 HSCAVIGVPHERWGEAVHAVVVLRPGLQAGEDE----------------LRTHCRAL-IA 478
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+K P+ V +R PL++ GKI + ++R
Sbjct: 479 SYKCPK-SVEFRTELPLSAAGKILKRDLR 506
>gi|333922026|ref|YP_004495607.1| Substrate-CoA ligase [Amycolicicoccus subflavus DQS3-9A1]
gi|333484247|gb|AEF42807.1| Substrate-CoA ligase [Amycolicicoccus subflavus DQS3-9A1]
Length = 556
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 203/446 (45%), Gaps = 65/446 (14%)
Query: 23 LRWHVSLGSSS--SDFVNKRDML--TADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
L + LGSS S F + D L ADI++ + + + A+ I +TSGTTG
Sbjct: 160 LEHAIFLGSSEWHSIFTSGADSLRADADIVRKAQAK-------LSADDAINIQYTSGTTG 212
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF- 136
PKG +SH ++ ++ Y E+D P H G + +A + G+ V
Sbjct: 213 FPKGATLSHHNILNNGFFVGELLSYTEEDRVCIPVPFYHCFGMVMGNLACVSHGSTMVIP 272
Query: 137 IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGL 193
P FE ++ L+AV + TSL VP + +A+L + + G D +++ + G
Sbjct: 273 APSFEPQATLQAVSEERCTSLYGVPTMFIAELN-----EPDFDGYDFSNLRTGVMAGSPC 327
Query: 194 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 253
P E+MK+ A++ YGMTETS T N +
Sbjct: 328 PVEIMKQVIERMGMAEVSICYGMTETSPVST--------------------QTRKNDSIE 367
Query: 254 PQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
+ VG+ PH+E+K+ + G TRG VML YWDQ
Sbjct: 368 HRVSTVGQVGPHLEIKIVDPATGQTVPRGTPGEFCTRGYSVMLGYWDQPDKTAEAIDAAR 427
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
W+ TGDI +DD G V + GR + GGENVYP E+E L HP ++ V+G+ + +
Sbjct: 428 WMHTGDIAVMDDEGYVSITGRIKDMVIRGGENVYPREIEEFLYTHPDVLDAQVIGVPDEK 487
Query: 368 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 427
E ++A V+LRE + L++E LR+ C K L +K PR +V
Sbjct: 488 YGEELMAWVQLREDAE---------------PLTAEALREFCTGK-LAHYKIPR-YVHIV 530
Query: 428 KPFPLTSTGKIRRDEVRREVMSHLKS 453
FP+T TGKIR+ E+ RE+ L S
Sbjct: 531 DEFPMTITGKIRKVEM-REIAKQLIS 555
>gi|379710061|ref|YP_005265266.1| acyl-CoA synthetase [Nocardia cyriacigeorgica GUH-2]
gi|374847560|emb|CCF64630.1| acyl-CoA synthetase [Nocardia cyriacigeorgica GUH-2]
Length = 541
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 182/395 (46%), Gaps = 47/395 (11%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
+ A+ I +TSGTTG PKG +SH ++ + GY E+D P H G+
Sbjct: 182 DDAINIQYTSGTTGFPKGATLSHHNILNNGYFVGELCGYTEEDRICVPVPFYHCFGMVMG 241
Query: 125 -MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+A GA V P F+ + L AVE TSL VP + D+ L +++ + +
Sbjct: 242 NLAATSHGAAIVIPAPSFQPAATLAAVEAERCTSLYGVPTMFIDM--LAQLEDSAADLST 299
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + G P E+MK + +++ + YGMTETS ++ T D +++
Sbjct: 300 LRTGIMAGSPCPVEVMKRVIDRMGMSEVCTCYGMTETSP-VSTQTRRDDSIDR------- 351
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQF 296
+ VG+ PH+E+K+ + G + TRG VML YW+
Sbjct: 352 ------------RTATVGRVGPHLEIKIVDPVTGRTVPRGEPGELCTRGYSVMLGYWNDP 399
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
W+ TGDIG +D+ G V + GR + GGEN+YP E+E L HP I+
Sbjct: 400 DRTAEAIDAARWMHTGDIGVMDEDGYVAVTGRIKDMVIRGGENIYPREIEEFLYTHPDIL 459
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
V+G+ + + E ++A VRLRE L ++ LR C K L
Sbjct: 460 DAQVIGVPDPKYGEELMAWVRLREG---------------AAPLDADALRVFCAGK-LAH 503
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
FK PR +V FP+T TGK+R+ E+R S L
Sbjct: 504 FKVPR-YVHVVDEFPMTVTGKVRKAEMREMARSLL 537
>gi|333990040|ref|YP_004522654.1| fatty-acid--CoA ligase [Mycobacterium sp. JDM601]
gi|333486008|gb|AEF35400.1| fatty-acid-CoA ligase FadD35 [Mycobacterium sp. JDM601]
Length = 511
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 192/415 (46%), Gaps = 50/415 (12%)
Query: 48 LKGYSLRSLPFTHSWAPEGA---VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYG 104
L G + ++ H+ P A + I +TSGTTG PKGV +SH ++ ++GY
Sbjct: 133 LAGTPVDTVALAHAARPLRATDPINIQYTSGTTGYPKGVTLSHRNILNNGYLVGDLLGYT 192
Query: 105 EDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPA 162
D PL H GL +A GA + P F+ + L AV++ TSL VP
Sbjct: 193 HRDRICLPVPLYHCFGLVMGNLAATSHGAAIILPGPGFDPAATLRAVQEEACTSLYGVPT 252
Query: 163 IMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSS 222
+ +A L S++ + G P+++M+ + ++ YGMTETS
Sbjct: 253 MF--IAELGLPDFADYDLTSLRTGIMAGSPCPAQVMRRVIDDMHMTEIAICYGMTETS-- 308
Query: 223 LTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH----- 277
P + + +S+ Q + VG+ PH+E+K+ + H
Sbjct: 309 -----------------PVSTQTRSGDSLTQ-RVETVGRVGPHLEIKMIDPATGHPVPRG 350
Query: 278 -VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSG 336
VG + TRG VM YW+ + E W+ +GD+ +DD G V + GR + G
Sbjct: 351 QVGELCTRGYSVMTGYWNDPAKSEAAIDAEGWMHSGDLAVMDDDGYVRITGRIKDMVIRG 410
Query: 337 GENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 396
GEN+YP E+E L HP I+ V+G+ + E ++A V LR+
Sbjct: 411 GENIYPREIEEFLHTHPDILDAQVIGVPDEIYGEELMAVVMLRDGAG------------- 457
Query: 397 ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
L+ E LR+ C + L FK PR + + FP+T+TGK+R+DEVRR+V+ L
Sbjct: 458 --PLTVERLREFCAGR-LAHFKVPRYLRVVAE-FPMTATGKVRKDEVRRQVIEQL 508
>gi|453070112|ref|ZP_21973364.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
gi|452761758|gb|EME20057.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
Length = 512
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 191/393 (48%), Gaps = 63/393 (16%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYG-EDDVYLHTAPLCHIGGLSSAMAM 127
++ +T GTTG KGV+ISH AL+ +L +A G + L PL HI G+ +A
Sbjct: 162 LLLYTGGTTGVSKGVMISHQALMTSALGTLAAGGVAISNGTNLAVNPLFHIAGIVGWLAQ 221
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD------ 181
++G VF+P F ++ LEAV+++ T++ VP ++ ++ K G D
Sbjct: 222 SLMGGTQVFVPNFSPRTFLEAVDRYRPTTVGLVPTML----QMLVAHKNETGEDATTYDL 277
Query: 182 -SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
SV+ + G + L+ + FP + YGMTET+ +++ P G
Sbjct: 278 SSVRILRYGASPISPTLLGQVMQMFPNSSFAQGYGMTETA----HISMLSPADHLEG--- 330
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQ 295
G++ ++ G+ PH ELK+ S VG I+T G+HVML YW+
Sbjct: 331 ---GDLLRSA---------GRALPHCELKIVDPAGSELPPGEVGEIVTFGSHVMLGYWN- 377
Query: 296 FLAKPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
KP S EV W+ TGD G +D G +++V R I +GGENVY EVE L Q
Sbjct: 378 ---KPKESA-EVLRSGWMHTGDAGYLDARGYLFIVDRIKDMIVTGGENVYSTEVENALAQ 433
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
H + V+G+ +A+ E V A V LR + +++ D+ LR H +
Sbjct: 434 HESVAACSVIGLPDAQWGERVHAVVVLRHGF---DADADE-------------LRAHVKT 477
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+ G+K+PR F + PL++ GK+ + ++R
Sbjct: 478 L-IAGYKSPRTF-QFVDALPLSAAGKVLKRDLR 508
>gi|302538259|ref|ZP_07290601.1| cyclohexanecarboxylate-CoA ligase [Streptomyces sp. C]
gi|302447154|gb|EFL18970.1| cyclohexanecarboxylate-CoA ligase [Streptomyces sp. C]
Length = 545
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 185/398 (46%), Gaps = 53/398 (13%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMA 126
V I +TSGTTG PKG +SH ++ + GY E D P H G + A+A
Sbjct: 190 VNIQYTSGTTGFPKGATLSHRNILNNGFFVGELCGYTERDRVCVPVPFYHCFGMVMGALA 249
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--S 182
GA V P F+ + L AVE TSL VP + +A+LA + G D S
Sbjct: 250 CTSHGAAMVIPAPAFDPAATLAAVEAEACTSLYGVPTMFIAELAA-----PGFDGYDLSS 304
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + G P E+M E A++ YGMTETS T T D ++E
Sbjct: 305 LRTGIMAGSPCPVEVMNEVIERMGMAEVSICYGMTETSPVST-QTRVDDSVER------- 356
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQF 296
+ VG+ PH+E+KV + G + TRG VML YW +
Sbjct: 357 ------------RVSTVGRVGPHLEVKVVDPETGATVPRGTPGELCTRGYSVMLGYWGEP 404
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
GE W+ TGD+ +D G + + GR + GGEN+YP E+E L HP ++
Sbjct: 405 QKTAEAVDGEGWMHTGDLAVMDADGYLAITGRIKDMVIRGGENLYPREIEEFLHGHPDVL 464
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ V+G+ +A+ E ++A VR+RE + L++E +R +C + L
Sbjct: 465 DVQVIGVPDAKYGEELMAWVRMREGAE---------------PLTAETVRAYCSGR-LAH 508
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
FK PR +V FP+T TGKIR+ E+R L+S+
Sbjct: 509 FKIPR-YVHVVDEFPMTVTGKIRKVEMREAAARLLESM 545
>gi|91228657|ref|ZP_01262572.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
12G01]
gi|91187778|gb|EAS74095.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
12G01]
Length = 513
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 193/388 (49%), Gaps = 58/388 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG ++ +I+ +L I+G DD++L T PL H G + + A
Sbjct: 172 VILYTSGTTGLPKGAELTQQNIIMNALVAQNIMGSQADDIHLVTLPLFHTFGQTVHLNAS 231
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
++ GA V +P+FE K LE VE+ VT VP + L + V+ + S++ +
Sbjct: 232 VLGGATLVLVPRFEPKHVLELVEKRRVTIFAGVPTMYIGL---LHVQHQFD-TSSLRVAV 287
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
+GG LP+E+ + +F ++ YG++ETS F L + PG
Sbjct: 288 SGGAPLPTEIFRTFEETF-NVPILEGYGLSETSPIACFNHLDQERI--PG---------- 334
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+P VE++V +G++ G I+ RG +VM Y D +P V
Sbjct: 335 ----------SVGQPVQGVEVRVIDIEGNALPIGEEGEIVVRGHNVMKGYLD----RPEV 380
Query: 303 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ + W TGD+G D GN+++V R I GG NVYP E+E V + HP + +
Sbjct: 381 TESALQNGWFHTGDVGRFDSSGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVSMVA 440
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+GI N E + A V L K KE + ++ L++ +E+ L FK
Sbjct: 441 VIGIPNEEYGEEIKAYVVL---------------KPKE-YIDADSLQKWGKEQ-LASFKY 483
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREV 447
PR +V R+ P+++TGKI + E++ E+
Sbjct: 484 PR-YVEIREHLPMSATGKILKRELKSEL 510
>gi|375102706|ref|ZP_09748969.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora cyanea NA-134]
gi|374663438|gb|EHR63316.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora cyanea NA-134]
Length = 548
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 185/393 (47%), Gaps = 53/393 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + GY E D P H G+ +A
Sbjct: 191 IQYTSGTTGFPKGATLSHHNILNNGFFVGELCGYTEADRICLPVPFYHCFGMVMGNLAAT 250
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVK 184
GAC V P F+ LEAV+ TSL VP + +A+LA + ++ D S++
Sbjct: 251 SHGACMVIPAPAFDPGKTLEAVQAERCTSLYGVPTMFIAELA-----EPDFEDYDLASLR 305
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E+MK+ A++ YGMTETS ++ T D +LE
Sbjct: 306 TGIMAGSPCPVEVMKQVIERMGMAEVSICYGMTETSP-VSTQTRADDSLER--------- 355
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 298
+ VGK PH+E+K+ + G + TRG VML YW+Q
Sbjct: 356 ----------RVSTVGKVGPHLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWEQPEK 405
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
V W+ TGD+ +D G V + GR + GGEN+YP E+E L HP I+
Sbjct: 406 TAEVIDAARWMHTGDLAVMDADGYVTITGRIKDMVIRGGENIYPREIEEFLYTHPDILDA 465
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+G+ +AR E ++A VR+R+ + +++E LR+ C + L +K
Sbjct: 466 QVIGVPDARYGEELMAWVRMRDGAE---------------PVTAESLREFCTGR-LAHYK 509
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
PR +V FP+T TGKIR+ E+R + + L
Sbjct: 510 IPR-YVHVVGEFPMTVTGKIRKVEMREKAVELL 541
>gi|219667086|ref|YP_002457521.1| AMP-dependent synthetase/ligase [Desulfitobacterium hafniense
DCB-2]
gi|219537346|gb|ACL19085.1| AMP-dependent synthetase and ligase [Desulfitobacterium hafniense
DCB-2]
Length = 528
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 200/400 (50%), Gaps = 63/400 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIA--IVGYGEDDVYLHTAPLCHIGGLSSAMAM 127
I FT GTTG KGV+ +H A + Q++ + +G D+V L +PL H GG++ + +
Sbjct: 165 IQFTGGTTGRSKGVMRTHEADLFQTIGVMTSNKMGASPDEVVLTQSPLHHQGGITWMLCV 224
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD----SV 183
++ GA V F+ L +EQ VT ++ +P +T +R+ RD SV
Sbjct: 225 MVTGAQFVICDGFDPVEILRQIEQERVTYMLLLPP-----STYLRLIDAPVFRDYDVSSV 279
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
K + GG ++++ +FP ++ +G TET + T++ T E
Sbjct: 280 KVVHTSAGGTSPAIIQKMAEAFPNCEVYYGWGQTETGAG----TVHRITREM-------- 327
Query: 244 GNVTPNSVHQPQGV-CVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFL 297
++H P+ +G+P P +L++ + VG + +G + Y+ Q
Sbjct: 328 ------ALHHPEKTQSIGRPMPFFQLRIVDEAGKDVPLGEVGEGIAKGPAIFSGYYKQ-- 379
Query: 298 AKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
P ++ G + W TGD+ D+ G ++V R+ IK+GGENV+ +EVEAV+ +HP
Sbjct: 380 --PELTDGTIADGWTRTGDMMRQDEEGLYYMVDRKKDMIKTGGENVFAQEVEAVIRKHPA 437
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
++ V+G+ + E V+A V+LR + + ++ +++HC+ ++L
Sbjct: 438 VLDCSVIGVPDQTFGEAVMAVVKLRAGYTAAAAD----------------IQEHCK-RDL 480
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVR---REVMSHL 451
+ +K PR +V + FP+ S GKI++ ++R RE+ SHL
Sbjct: 481 SSYKKPR-YVEFLDEFPVDSAGKIQKFKLRKKYREIYSHL 519
>gi|354612743|ref|ZP_09030685.1| Long-chain-fatty-acid--CoA ligase [Saccharomonospora
paurometabolica YIM 90007]
gi|353222881|gb|EHB87176.1| Long-chain-fatty-acid--CoA ligase [Saccharomonospora
paurometabolica YIM 90007]
Length = 551
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 179/390 (45%), Gaps = 47/390 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ + + GY E D P H G + +A
Sbjct: 190 IQYTSGTTGFPKGATLSHHNILNNGFSVGELCGYDETDRICLPVPFYHCFGMVMGNLAAT 249
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA V P F+ + L AVE TSL VP + +A L S++ +
Sbjct: 250 SHGAATVIPAPAFDPAATLAAVEAERCTSLYGVPTMF--IAELALSGFDDYDLTSLRTGI 307
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P+E+M++ + A++ YGMTETS ++ T D TL+
Sbjct: 308 MAGSPCPAEVMRQIIDRMHMAEVSICYGMTETSP-VSVQTRRDDTLDR------------ 354
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPS 301
+ VG+ PH+E+K+ + H G + TRG VML YWDQ
Sbjct: 355 -------RVSTVGRVGPHLEIKIVDPATGLTVPRGHTGELCTRGYSVMLGYWDQPEQTAE 407
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
V W+ TGD+ +DD G V + GR + GGEN+YP E+E L HP I+ V+
Sbjct: 408 VIDAARWMHTGDLAVMDDEGYVAVTGRSKDMVIRGGENIYPREIEEFLHTHPDILDAQVI 467
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + R E ++A V+LR+ L++E LR+ C + L +K PR
Sbjct: 468 GVPDERYGEELMAWVQLRDPAP---------------TLTAEALREFCAGR-LAHYKIPR 511
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+V FP+T TGK+R+ +R + L
Sbjct: 512 -YVHVVDEFPMTVTGKVRKVAMRERAVELL 540
>gi|339008758|ref|ZP_08641331.1| long-chain-fatty-acid--CoA ligase [Brevibacillus laterosporus LMG
15441]
gi|338774558|gb|EGP34088.1| long-chain-fatty-acid--CoA ligase [Brevibacillus laterosporus LMG
15441]
Length = 526
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 181/384 (47%), Gaps = 50/384 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-ML 128
I +TSGT PKGV+++H LI Q ++ I E D+ +H PL H L + L
Sbjct: 175 IMYTSGTESKPKGVMLTHKNLIAQYMSVILDGDLTEQDILVHALPLFHSAQLHCFLGPHL 234
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
VGA + LE VE++ T L P + +A L + S++K
Sbjct: 235 YVGASGTILEHAAPALMLETVERYGATQLFCPPTVW--IALLRSEDFAARNLSSLQKCYY 292
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G +P E++KE P++KL + YG TE + T + +D +T
Sbjct: 293 GAAIMPVEIIKELCMRLPQSKLYNFYGQTEVAPLATVLKPHDQLRKTGS----------- 341
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYW-DQFLAKPSV 302
GKPA HVE K+ + + H+G I+ R +H+ML Y+ D+ + +
Sbjct: 342 ----------AGKPALHVETKIVDESGNEVPIGHIGEIVHRSSHIMLGYFKDEEKTRSAF 391
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
G W +GD+GS+D+ G + +V R+ IK+GGENV E+E + QHP + + V+G
Sbjct: 392 QGG--WFHSGDLGSMDEEGYITVVDRKKDMIKTGGENVASREIEEWMYQHPKVSEVAVIG 449
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + E V A V +N + + +ELL Q C+ K L+ FK P+
Sbjct: 450 IPHPYWIEAVTAIVV---------ANAGEEIETEELL-------QFCK-KGLSSFKVPK- 491
Query: 423 FVLWRKPFPLTSTGKIRRDEVRRE 446
FV+ P +GKI + E+RR+
Sbjct: 492 FVVVTDQLPRNPSGKIVKRELRRQ 515
>gi|339328651|ref|YP_004688343.1| long-chain-fatty-acid--CoA ligase LcfB [Cupriavidus necator N-1]
gi|338171252|gb|AEI82305.1| long-chain-fatty-acid--CoA ligase LcfB [Cupriavidus necator N-1]
Length = 528
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 211/445 (47%), Gaps = 57/445 (12%)
Query: 12 YLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIIC 71
Y +P+++ + +GSS+ + D+L A ++ + S PE +++
Sbjct: 123 YFASMGARLPTVQHYFFMGSSAVPADQRFDLLLATVVDQARIDRA--QSSIVPEDPLVLI 180
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMV 130
+TSGTTG PKG +I+H + + ++A+ + +G +D+ + PL H+GGL+ +AML+
Sbjct: 181 YTSGTTGRPKGALITHRSQLASAVAQCSHLGLRSNDLQMLALPLNHVGGLTCGFLAMLLG 240
Query: 131 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK-GRDSVKKILNG 189
G + IP F K + + T ++ VP + L+R + + R V+ ++ G
Sbjct: 241 GGTSLLIPTFSPKQVISDMLSFPPTIVVGVPTMHT---LLLREEAIGQLDRQRVRLVITG 297
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G L+++ +FPKA +++ YG++ETS + M+ +D + +
Sbjct: 298 GANADPNLLQQLQQTFPKASVMNLYGLSETSGA-ALMSPWDSDFDAIVR----------- 345
Query: 250 SVHQPQGVCVGKPAPHVELKVCS-DG----SSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
VG+P P VEL++ DG + G + RG + Y D P+ S
Sbjct: 346 --------TVGRPLPGVELRIVRPDGRDAATGEAGELWIRGELTVAGYIDM----PTESA 393
Query: 305 GEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+G DD G V L+GR GG NVYP EVE VLL+HP ++ + +
Sbjct: 394 NAFFDGWVRTGDLGCRDDEGLVTLMGRSKEMYVQGGFNVYPIEVENVLLRHPDVLMVAGI 453
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + L E+ V + Q S+E L +CR + L +K PR
Sbjct: 454 GVPDPVLGEVGHYYVVPKPGSQP----------------SAESLIDYCR-RLLADYKVPR 496
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRRE 446
+L+R P+T TGKI + + E
Sbjct: 497 Q-ILFRDSLPMTPTGKIVKARLLEE 520
>gi|317123519|ref|YP_004097631.1| AMP-dependent synthetase and ligase [Intrasporangium calvum DSM
43043]
gi|315587607|gb|ADU46904.1| AMP-dependent synthetase and ligase [Intrasporangium calvum DSM
43043]
Length = 543
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 184/392 (46%), Gaps = 53/392 (13%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P + I +TSGTTG PKG +SH ++ + Y E D P H G+
Sbjct: 186 PSDPINIQYTSGTTGFPKGATLSHRNILNNGFFVGELCRYTEADRVCIPVPFYHCFGMVM 245
Query: 124 A-MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+A GAC V P F+ + L+AV+ TSL VP + +L ++ D
Sbjct: 246 GNLACTTHGACMVIPAPGFDPTATLKAVQDEQCTSLYGVPTMFIAEWSL----PSFADYD 301
Query: 182 --SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
SV+ + G P+ LMK+ S + I YGMTETS
Sbjct: 302 ISSVRTGIMAGSPCPAPLMKQLIASGIEEMTI-CYGMTETS------------------- 341
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYW 293
P + N T ++ Q G VG+ PH+E+K+ G+ G LT+G VML YW
Sbjct: 342 PVSTQNRTDDTFEQKTGT-VGRVHPHLEIKIVDPGTGETVRRGQAGEFLTKGYSVMLGYW 400
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
+Q K + + + W+ TGD+G + D G V + GR + GGENVYP E+E L HP
Sbjct: 401 EQ-PDKTAEAIEDGWMHTGDLGVMHDDGYVEITGRIKDMVIRGGENVYPREIEEFLYTHP 459
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
I+ V+G+ +++ E + A VR+RE + L++E LR+ C +
Sbjct: 460 DILDAQVIGVPDSKYGEELCAWVRMREGAE---------------PLTAEALREFCTGQ- 503
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
L +K PR +V FP+T TGKIR+ E+R
Sbjct: 504 LAHYKIPR-YVEVVDEFPMTVTGKIRKVEMRE 534
>gi|89897044|ref|YP_520531.1| hypothetical protein DSY4298 [Desulfitobacterium hafniense Y51]
gi|89336492|dbj|BAE86087.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 528
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 199/400 (49%), Gaps = 63/400 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIA--IVGYGEDDVYLHTAPLCHIGGLSSAMAM 127
I FT GTTG KGV+ +H A + Q++ + +G D+V L +PL H GG++ + +
Sbjct: 165 IQFTGGTTGRSKGVMRTHEADLFQTIGVMTSNKMGASPDEVVLTQSPLHHQGGITWMLCV 224
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD----SV 183
++ GA V F+ L +EQ VT ++ +P +T +R+ RD SV
Sbjct: 225 IVTGAQFVICDGFDPVEILRQIEQERVTYMLLLPP-----STYLRLIDAPVFRDYDVSSV 279
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
K + GG ++++ +FP ++ +G TET + T++ T E
Sbjct: 280 KVVHTSAGGTSPAIIQKMAEAFPNCEVYYGWGQTETGAG----TVHRITREM-------- 327
Query: 244 GNVTPNSVHQPQGV-CVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFL 297
++H P+ +G+P P +L++ + VG + +G + Y+ Q
Sbjct: 328 ------ALHHPEKTQSIGRPMPFFQLRIVDEAGKDVPLGEVGEGIAKGPAIFSGYYKQ-- 379
Query: 298 AKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
P ++ G + W TGD+ D+ G ++V R+ IK+GGENV+ +EVEAV+ +HP
Sbjct: 380 --PELTDGTITDGWTRTGDMMRQDEEGLYYMVDRKKDMIKTGGENVFAQEVEAVIRKHPA 437
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
++ V+G+ + E V+A V+LR + + ++ +++HC+ ++L
Sbjct: 438 VLDCSVIGVPDQTFGEAVMAVVKLRSGYTATAAD----------------IQEHCK-RDL 480
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVR---REVMSHL 451
+ +K PR +V + FP+ S GKI++ +R RE+ SHL
Sbjct: 481 SSYKKPR-YVEFLDEFPVDSAGKIQKFRLRKKYREIYSHL 519
>gi|73538583|ref|YP_298950.1| AMP-dependent synthetase/ligase [Ralstonia eutropha JMP134]
gi|72121920|gb|AAZ64106.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 518
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 186/386 (48%), Gaps = 53/386 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV+ SH L +++++A ED + LH PL H ++ A+ + +
Sbjct: 163 IMYTGGTTGKPKGVMQSHMNLWSSAISRMAQYPCPEDTITLHACPLFHTAAMAKAVTLFV 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GA H IP F++K L+ + + V ++ VP ++ A L +++I G
Sbjct: 223 AGATHALIPAFDAKEVLDTMVREQVNEILLVPTMLQ--AVLSHPDFASHDLSGLQRINYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ + L+ A + P+ + AYG+TE + ++ V P
Sbjct: 281 ASPISAGLLDAALAALPQVQFFHAYGLTEAAPVVS---------------------VNPP 319
Query: 250 SVHQPQGVC------VGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLA 298
H P+G G+ V +K+ + + VG I+ RG +VM YW++ A
Sbjct: 320 VNHGPEGRASGLYRSAGRAGYGVTVKIVDEQGVEVPRNTVGEIIVRGPNVMQGYWNK-PA 378
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ + + + WL TGD +D+ G +++V R I SGGENVY EVE VL +HP +
Sbjct: 379 ETAATLRDGWLHTGDGAYMDENGYLFIVDRLKDMIVSGGENVYSAEVENVLSRHPAVASC 438
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+G+ +AR E V A + L+ Q E+ LR+HCR+ + G+K
Sbjct: 439 AVIGVPDARWGEAVHAVIVLKPGAQADEAG----------------LREHCRQ-FIAGYK 481
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVR 444
P+ + +R PL++ GKI + ++R
Sbjct: 482 CPK-SIEFRAEMPLSAAGKILKRDLR 506
>gi|28898738|ref|NP_798343.1| long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus RIMD
2210633]
gi|260877268|ref|ZP_05889623.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus AN-5034]
gi|260897784|ref|ZP_05906280.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus
Peru-466]
gi|28806956|dbj|BAC60227.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
RIMD 2210633]
gi|308087611|gb|EFO37306.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus
Peru-466]
gi|308090297|gb|EFO39992.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus AN-5034]
Length = 513
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 191/388 (49%), Gaps = 58/388 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG ++ +++ +L I+ DDV+L T PL H G + + A
Sbjct: 172 VILYTSGTTGLPKGAELTQQNIVMNALVAQNIMASQADDVHLVTLPLFHTFGQTVHLNAS 231
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ GA V +P+F+ K LE +E+H VT VP + L + V+ S++ +
Sbjct: 232 VQSGATLVLVPRFDPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNCD-ISSLRVAV 287
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
+GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 288 SGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG---------- 334
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+P VE+KV DG + G I+ RG +VM Y D +P V
Sbjct: 335 ----------SVGQPIQGVEVKVVDLDGHTLPVGEEGEIIVRGHNVMKGYLD----RPEV 380
Query: 303 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP + +
Sbjct: 381 TESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVAMVA 440
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+GI + E + A V L+ + Q+ E++ EL L RE+ L FK
Sbjct: 441 VIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LANFKY 483
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREV 447
PR FV R+ P+++TGKI + E++ E+
Sbjct: 484 PR-FVEIREQLPMSATGKILKRELKSEL 510
>gi|254517286|ref|ZP_05129343.1| feruloyl-CoA synthetase [gamma proteobacterium NOR5-3]
gi|219674124|gb|EED30493.1| feruloyl-CoA synthetase [gamma proteobacterium NOR5-3]
Length = 519
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 177/381 (46%), Gaps = 40/381 (10%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG PKGV++S AL +L+ + Y DVYLH P+ H+ + + A
Sbjct: 163 LYYTGGTTGFPKGVMLSQQALWFNNLSVSSASNYLCGDVYLHAGPMFHLADGAFSGAACT 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G CH F+P F+ ++ +E +T + VP ++ LA + +++ + G
Sbjct: 223 GGLCHTFLPAFDPVKVMDLIEGEQITHTLMVPTMLGMLANHPDFDP--QRLRTLRSVAYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+P LM P + YG TE + +T + + TLE P
Sbjct: 281 ASPMPEGLMLNLLEVLPWIGWMQGYGQTEMAPIITLLAAENHTLEGP------------- 327
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
H + G+ P VE+++C D + VG I+ R ML YW++ + + +
Sbjct: 328 --HAGKLRSAGRAGPGVEIRICDDQGNDLPNGEVGEIVARSPGSMLGYWNR-PEQTADTL 384
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
+ W++TGD DD G +++V R I +GGENV+ EVE + HP + + V+GI
Sbjct: 385 KDGWVNTGDGAYRDDDGFIFIVDRLKDMIVTGGENVFSAEVENAVSTHPAVAAVSVIGIP 444
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ + E V A V L E Q++ +ELL + + + +K PR
Sbjct: 445 DEKWGEAVHAIVILHEG---------QTATAEELLEHTVPV--------IANYKRPRSIS 487
Query: 425 LWRKPFPLTSTGKIRRDEVRR 445
+PFPL+ GKI + E+R+
Sbjct: 488 FRTEPFPLSGAGKILKTELRK 508
>gi|452949082|gb|EME54553.1| AMP-binding domain protein [Amycolatopsis decaplanina DSM 44594]
Length = 552
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 179/390 (45%), Gaps = 47/390 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E D P H G+ +A
Sbjct: 191 IQYTSGTTGFPKGATLSHHNILNNGYFVGELCNYTEADKVCIPVPFYHCFGMVMGNLAAT 250
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GAC V P FE K+ LEAV TSL VP + +A L S++ +
Sbjct: 251 THGACMVIPAPAFEPKATLEAVAAEKCTSLYGVPTMF--IAELADPDFASHDLSSLRTGI 308
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK+ + A++ YGMTETS ++ T D ++E
Sbjct: 309 MAGSPCPVEVMKQVIDRMGMAEVSICYGMTETSP-VSTQTRADDSVER------------ 355
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPS 301
+ VG+ PH+E+KV + G + TRG VML YW+Q
Sbjct: 356 -------RVSTVGRVGPHLEVKVVDPETGLTVPRGEPGELCTRGYSVMLGYWEQADKTAE 408
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ +D G V + GR + GGEN+YP E+E L HP I+ V+
Sbjct: 409 AIDAARWMHTGDLAIMDADGYVNITGRIKDMVIRGGENLYPREIEEFLYTHPDILDAQVI 468
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E ++A +R+RE L++E +R+ C E L +K PR
Sbjct: 469 GVPDEKYGEELMAWIRMREG---------------AAPLTAEAVREFC-EGKLARYKIPR 512
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+V + FP+T TGK+R+ E+R E +S L
Sbjct: 513 -YVHVVEEFPMTVTGKVRKVEMRAESISIL 541
>gi|404401576|ref|ZP_10993160.1| AMP-binding domain protein [Pseudomonas fuscovaginae UPB0736]
Length = 560
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 202/453 (44%), Gaps = 61/453 (13%)
Query: 6 ESSDSWYLELQHTAIPSLRWHVSLGSSSS-------DFVNKRDMLTADILKGYSLRSLPF 58
E +DS L +P LR +SLG + + + + + + ++A+ L+ S + L F
Sbjct: 142 ELADSTLGHLHSHLLPELRGVISLGRTPAAGMLGWAELLERAEAVSAEQLRACSAQ-LQF 200
Query: 59 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI 118
+ + I +TSGTTG PKG +SH ++ +G E D + PL H
Sbjct: 201 ------DEPINIQYTSGTTGFPKGATLSHYNILNNGYFVGESLGLTEHDRLVIPVPLYHC 254
Query: 119 GGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
G+ + + P F+ +AL+AV + T L VP + +A L +
Sbjct: 255 FGMVMGNLGCLTHGSTLIYPSDAFDPLTALQAVAEERATVLYGVPTMF--IAELDHPHRA 312
Query: 177 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
+++ + G P E+MK A++ AYGMTETS T T D LE
Sbjct: 313 EFDLSTLRTGIMAGATCPIEVMKRVIGEMHMAEVQIAYGMTETSPVST-QTAADDDLER- 370
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLR 291
+ VG+ PH+E K+ + +G + TRG VML
Sbjct: 371 ------------------RVASVGRTQPHLESKIIDEAGRIVPRGEIGELCTRGYSVMLG 412
Query: 292 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
YW+ A G W+ TGD+ +D+ G V +VGR I GGENVYP E+E L +
Sbjct: 413 YWNNPEATAEALDGACWMHTGDLAVMDEAGYVSIVGRNKDMIIRGGENVYPREIEEFLFR 472
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
HP + + V+GI + R E +VA V+ C E E L+ C+
Sbjct: 473 HPAVADVQVIGIPDERYGEEIVAWVK-----------CHPGHDADE-----EELKVFCKG 516
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
K + FK PR F L+ + FP+T TGK+++ +R
Sbjct: 517 K-IAHFKVPRHF-LFVEAFPMTVTGKVQKFRMR 547
>gi|365155083|ref|ZP_09351476.1| hypothetical protein HMPREF1015_01128 [Bacillus smithii 7_3_47FAA]
gi|363628799|gb|EHL79508.1| hypothetical protein HMPREF1015_01128 [Bacillus smithii 7_3_47FAA]
Length = 546
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 206/456 (45%), Gaps = 67/456 (14%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEG 66
ELQ +P L+ + L S + K ++ LK S RSL P+
Sbjct: 139 ELQSKRLPLLKNVIVLSEKPYSGMYNWSQLIEKGKRISDQELKARS-RSL------HPDD 191
Query: 67 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAM 125
+ + +TSGTTG PKGV+++H L+ + + +DD P H G + +
Sbjct: 192 VINMQYTSGTTGFPKGVMLTHYNLVNNARNIAECMKLTKDDRLCIPVPFFHCFGCVIGTL 251
Query: 126 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
A + VGA V + +F+ ++ L+ VE+ T+L VP + ++ L + +++
Sbjct: 252 ASVSVGATMVPVQEFDPEAVLQTVEKEKCTALHGVPTMF--ISELNHSNFSKYNLTTLRT 309
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT---LETPGQLPQA 242
+ G P E+MK + YG TE+S +T DP +ET
Sbjct: 310 GVMAGSNCPMEVMKAVMEKMGMKDITICYGQTESSPVITQSRTDDPVSLRVET------- 362
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQF 296
VGK PHVE+K+ GS+ V G + TRG HVM Y+
Sbjct: 363 ----------------VGKALPHVEVKIVEPGSNRVLPPNTQGELCTRGYHVMKGYYKNP 406
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
A V + WL TGD+ +D+ G V + GR I GGEN+YP E+E L QHP I+
Sbjct: 407 EATKEVIDEDHWLHTGDLAVMDENGYVRITGRLKDMIIRGGENIYPREIEEFLYQHPKIL 466
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ VVG+ + + E V A + L+E +E +R C+ K ++
Sbjct: 467 DVQVVGVPDEKFGEEVGAWIILKEGET----------------ADAEEIRAFCKGK-ISR 509
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
K P+ +V + +P+T++GKI++ ++R + +K
Sbjct: 510 HKVPK-YVFFTDEYPMTASGKIQKFKLRERYLEDIK 544
>gi|260903505|ref|ZP_05911900.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus AQ4037]
gi|308106743|gb|EFO44283.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus AQ4037]
Length = 513
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 191/388 (49%), Gaps = 58/388 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG ++ +++ +L I+ DDV+L T PL H G + + A
Sbjct: 172 VILYTSGTTGLPKGAELTQQNIVMNALVAQNIMASQADDVHLVTLPLFHTFGQTVHLNAS 231
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ GA V +P+F+ K LE +E+H VT VP + L + V+ S++ +
Sbjct: 232 VQSGATLVLVPRFDPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNCD-ISSLRVAV 287
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
+GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 288 SGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG---------- 334
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+P VE+KV DG + G I+ RG +VM Y D +P V
Sbjct: 335 ----------SVGQPIQGVEVKVVDLDGHTLPVGEEGEIIVRGHNVMKGYLD----RPEV 380
Query: 303 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP + +
Sbjct: 381 TESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVAMVA 440
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+GI + E + A V L+ + Q+ E++ EL L RE+ L FK
Sbjct: 441 VIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LANFKY 483
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREV 447
PR FV R+ P+++TGKI + E++ E+
Sbjct: 484 PR-FVEIREQLPMSATGKILKRELKSEL 510
>gi|423074972|ref|ZP_17063691.1| AMP-binding enzyme [Desulfitobacterium hafniense DP7]
gi|361853921|gb|EHL06036.1| AMP-binding enzyme [Desulfitobacterium hafniense DP7]
Length = 528
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 198/400 (49%), Gaps = 63/400 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIA--IVGYGEDDVYLHTAPLCHIGGLSSAMAM 127
I FT GTTG KGV+ +H A + Q++ + +G D+V L +PL H GG++ + +
Sbjct: 165 IQFTGGTTGRSKGVMRTHEADLFQTIGVMTSNKMGASPDEVVLTQSPLHHQGGITWMLCV 224
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD----SV 183
++ GA V F+ L +EQ VT ++ +P +T +R+ RD SV
Sbjct: 225 MVTGAQFVICDGFDPVEILRQIEQERVTYMLLLPP-----STYLRLIDAPVFRDYDVSSV 279
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
K + GG ++++ +FP ++ +G TET + T++ T E
Sbjct: 280 KVVHTSAGGTSPAIIQKMAEAFPNCEVYYGWGQTETGAG----TVHRITREM-------- 327
Query: 244 GNVTPNSVHQPQGV-CVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFL 297
++H P+ +G+P P +L++ + VG + +G + Y+ Q
Sbjct: 328 ------ALHHPEKTQSIGRPMPFFQLRIVDEAGKDVPLGEVGEGIAKGPAIFSGYYKQ-- 379
Query: 298 AKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
P ++ G + W TGD+ D+ G ++V R+ IK+GGENV+ +EVEAV+ +HP
Sbjct: 380 --PELTDGTITDGWTRTGDMMRQDEEGLYYMVDRKKDMIKTGGENVFAQEVEAVIRKHPA 437
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
++ V+G+ + E V+A V+LR + + ++ +++HC+ ++L
Sbjct: 438 VLDCSVIGVPDQTFGEAVMAVVKLRSGYTATAAD----------------IQEHCK-RDL 480
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVR---REVMSHL 451
+ +K PR +V + FP+ S GKI++ +R RE+ SH
Sbjct: 481 SSYKKPR-YVEFLDEFPVDSAGKIQKFRLRKKYREIYSHF 519
>gi|383825038|ref|ZP_09980193.1| AMP-dependent synthetase and ligase [Mycobacterium xenopi
RIVM700367]
gi|383335754|gb|EID14178.1| AMP-dependent synthetase and ligase [Mycobacterium xenopi
RIVM700367]
Length = 496
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 188/390 (48%), Gaps = 64/390 (16%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM- 127
+I +TSGTTG PKG ++H L + + G+ +DD+ + P+ H+ GLSS + +
Sbjct: 156 VIIYTSGTTGKPKGAELTHFQLFMNCTVAGELFGFRDDDIGIAVLPMFHVFGLSSVLNVT 215
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 185
+ G V +P+F+ K+ +E + H T VP + L ++ G D +++
Sbjct: 216 VRFGGTLVLVPRFDPKTVIEELALHRCTIFSGVPTMYFAL-----LQADTHGHDLSALRV 270
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
++GG +P E+++ FP ++ YG++ET+S+ TF N
Sbjct: 271 GISGGAAIPGEVIRAFEEKFPGVVILEGYGLSETASTTTF-------------------N 311
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSD-------GSSHVGRILTRGAHVMLRYWDQFLA 298
+ S Q + + +GKP V++ V + G +VG I+ RG +VM Y++
Sbjct: 312 I---SAEQRKVLSIGKPIWGVQVSVVDENDHELPPGPDNVGEIVIRGHNVMKGYYN---- 364
Query: 299 KPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
KP +T E W TGD+ D+ G ++V R+ + GG NVYP E+E VL H G
Sbjct: 365 KPE-ATAEAFRNGWFHTGDLAYRDEDGYFFIVDRKKDLVIRGGYNVYPREIEEVLFDHHG 423
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ V+G + +L + V+A V +E + L+SE L HC+E+ L
Sbjct: 424 VAAAAVIGKPDEKLGQEVLAFVVAKEGVE----------------LTSEELIAHCKER-L 466
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+K PR + + P TGK+ + E+R
Sbjct: 467 AAYKYPREIRIVDE-LPTGPTGKVLKKELR 495
>gi|381163253|ref|ZP_09872483.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora azurea NA-128]
gi|379255158|gb|EHY89084.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora azurea NA-128]
Length = 547
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 190/402 (47%), Gaps = 53/402 (13%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
S + + + I +TSGTTG PKG +SH ++ + Y E+D P H G
Sbjct: 181 SLSADDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGQLCDYTEEDRICLPVPFYHCFG 240
Query: 121 LSSA-MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTW 177
+ +A GAC V P F+ ++ LEAV+ TSL VP + +A+LA +
Sbjct: 241 MVMGNLAATSHGACMVIPAPAFDPRATLEAVQAERCTSLYGVPTMFIAELAV-----PGF 295
Query: 178 KGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
+ D S++ + G P E+MK+ +++ YGMTETS T T D ++E
Sbjct: 296 EDYDLGSLRTGIMAGSPCPVEVMKQVIERMGMSEVSICYGMTETSPVST-QTRKDDSIER 354
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVM 289
+ VG+ PH+E+KV + G + TRG VM
Sbjct: 355 -------------------RVSTVGRVGPHLEVKVVDPETGLTVPRGTPGELCTRGYSVM 395
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
L YW+Q V W+ TGD+ +DD G + + GR + GGENVYP E+E L
Sbjct: 396 LGYWEQPEKTAEVIDAARWMHTGDLAVMDDDGYLGITGRLKDLVIRGGENVYPREIEEFL 455
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
HP I+ V+G+ +A+ E ++A VR+R+ + +++E LR+ C
Sbjct: 456 YSHPDILDAQVIGVPDAKYGEELMAWVRMRDGAE---------------PVTAESLREFC 500
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ L +K PR +V FP+T TGKIR+ E+R + + L
Sbjct: 501 TGR-LAHYKIPR-YVHVVDEFPMTVTGKIRKVEMREKAVELL 540
>gi|418047004|ref|ZP_12685092.1| o-succinylbenzoate--CoA ligase [Mycobacterium rhodesiae JS60]
gi|353192674|gb|EHB58178.1| o-succinylbenzoate--CoA ligase [Mycobacterium rhodesiae JS60]
Length = 519
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 182/388 (46%), Gaps = 60/388 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAML 128
I +T GT+G PKGV+++H L+ +L +A + LH AP+ H+ L+ +A +
Sbjct: 167 IFYTGGTSGHPKGVMLTHDNLMTSALGSLASGFFLTSGGPLLHAAPMFHLADLAIWLAQV 226
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
G HVF+P F LEA+ +H +T L+ VP ++ L + S++ ++
Sbjct: 227 SRGGTHVFVPAFRPDWVLEALHEHRITDLLLVPTMVQMLVDHPSLSD--HDTSSLRMVMY 284
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT---LYDPTLETPGQLPQAFGN 245
GG + + L++ A P A + AYGMTE S T ++ +DP L G
Sbjct: 285 GGSPIAAALLERAAARLPTASFVQAYGMTEVSPVATLLSPQDHHDPVLRRSG-------- 336
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKP 300
G+ APH E+++ D + VG I+ RG HVM YW KP
Sbjct: 337 --------------GQAAPHSEVRIVGDDDTELPRGEVGEIVVRGGHVMAGYW----GKP 378
Query: 301 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ + W+ TGD G +D+ G +++V R I SGGENVY EVE L +HP +
Sbjct: 379 EETAAALRSGWMHTGDAGYMDERGYIFVVDRLKDMIVSGGENVYSVEVENALARHPAVAT 438
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG- 416
V+GI + R E V A V Q + + E LR+ C K+L G
Sbjct: 439 CAVIGIPDDRWGERVHAVVVF---------AAGQRADHDE-------LREFC--KSLIGT 480
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+K PR F P ++ GK+ + E+R
Sbjct: 481 YKVPRSFEA-VDALPTSAAGKVLKRELR 507
>gi|441160730|ref|ZP_20967802.1| AMP-binding domain protein [Streptomyces rimosus subsp. rimosus
ATCC 10970]
gi|440616867|gb|ELQ79989.1| AMP-binding domain protein [Streptomyces rimosus subsp. rimosus
ATCC 10970]
Length = 584
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 171/386 (44%), Gaps = 47/386 (12%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
+P V I +TSGTTG PKG +SH ++ VGY E D P H G+
Sbjct: 200 SPHDPVNIQYTSGTTGFPKGATLSHHNILNNGFWVGETVGYTEHDRVCLPVPFYHCFGMV 259
Query: 123 SA-MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ GAC V P F++ + L AVEQ TSL VP + +A L
Sbjct: 260 MGNLGATSHGACIVIPAPAFDAAATLRAVEQERCTSLYGVPTMF--IAELDHPDFATFDL 317
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
S++ + G P E+M+ + A++ YGMTETS T D G
Sbjct: 318 SSLRTGIMAGSPCPEEVMRRVVSEMHMAEVSICYGMTETSPVSTQTRRDDDLAHRTGT-- 375
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 294
VG+ PH+E+KV + G + TRG VML YW+
Sbjct: 376 ------------------VGRVLPHIEVKVVDPATGATVPRGEPGELCTRGYSVMLGYWE 417
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
+ E W+ TGD+ ++D G + +VGR I GGENVYP E+E L HP
Sbjct: 418 EPERTDEAIDAERWMHTGDLAVMNDDGYLRIVGRIKDMIIRGGENVYPREIEEFLYTHPK 477
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
I + VVG+ +A+ E + ACV LR+ L+ + L + CR + L
Sbjct: 478 IADVQVVGVPDAKYGEEIAACVILRDPAAG---------------LTRDELARFCRSR-L 521
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRR 440
+K PR +V FP+T +GK+R+
Sbjct: 522 AHYKVPR-YVHVLDAFPMTVSGKVRK 546
>gi|409391789|ref|ZP_11243447.1| putative acid--CoA ligase [Gordonia rubripertincta NBRC 101908]
gi|403198390|dbj|GAB86681.1| putative acid--CoA ligase [Gordonia rubripertincta NBRC 101908]
Length = 503
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 188/385 (48%), Gaps = 39/385 (10%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ II FTSGTT +PKGV++ HS L+ ++ + E D L + P H+ G+ +
Sbjct: 140 PDDPAIILFTSGTTSAPKGVILRHSHLLSYVMSTVEYGSAAETDGALISVPPYHVAGMGT 199
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
+ + G +++P F++++ +E V + TS + VP ++ + ++ ++ ++
Sbjct: 200 ILTNIYAGRRLIYLPNFDARAWVELVRREGATSAMVVPTMLDRIVDVLAGERA--DVPTL 257
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + GG +P ++ A +FP+A ++AYG+TETSS++ + P A
Sbjct: 258 RSLSYGGARMPRPTLEAALRAFPEAGFVNAYGLTETSSTIALL--------GPEDHRAAL 309
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLA 298
+ P V Q + +G+P P +E+++ S S G + RG V +++
Sbjct: 310 DSDDP--VVQARLGSIGRPVPGIEIQLRSPEGLPVASGEQGELWVRGPQVS----GEYMG 363
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
SV E W T D+ D G +++VGR + I GGEN+ P E+E VL+ HP + +
Sbjct: 364 AGSVLDAEGWFPTKDLAYTDTEGFLYIVGRNDDTIIRGGENIAPAEIEDVLVHHPMVRSV 423
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVVGI + E + A V + + E LR + RE+ L G +
Sbjct: 424 VVVGIPDDHWGEAIAAAVVVEPGMS----------------VDPEELRTYVRER-LRGSR 466
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEV 443
P V++ P T+TGKI R +V
Sbjct: 467 TPDR-VIFLDDLPATATGKILRKDV 490
>gi|392957198|ref|ZP_10322722.1| AMP-binding domain protein [Bacillus macauensis ZFHKF-1]
gi|391876605|gb|EIT85201.1| AMP-binding domain protein [Bacillus macauensis ZFHKF-1]
Length = 539
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 215/475 (45%), Gaps = 62/475 (13%)
Query: 1 MLVTDESSDSWYLELQHTAI------PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLR 54
+ + D D+ Y+E+ + P L V +G S + D L +L G ++
Sbjct: 108 LFLIDGYRDASYVEMAQEVMRKKEQFPLLESFVHIGPQSPQNMMSWDHL---LLNGANIT 164
Query: 55 S---LPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLH 111
S P+ + + +TSGTTG PKGV+++H+ ++ + + +D
Sbjct: 165 DETLYTIEQSLDPDDVINMQYTSGTTGFPKGVMLTHNNVLGNAERLAEAMKLTAEDSLCI 224
Query: 112 TAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATL 170
P H G + + + GA V I +F + L+ VE+ T+L VP + +A L
Sbjct: 225 PVPFFHCFGCVIGTLTAMTAGATMVPIVQFNPRDVLQTVEKEKCTALHGVPTMF--IAEL 282
Query: 171 IRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD 230
+ + S++ + G P E+MK+ N+ +++ AYG TETS T D
Sbjct: 283 NDEQFSQFDLSSLRTGVMAGSTCPIEVMKKVINAMGMSEITIAYGQTETSPVFTQTRPED 342
Query: 231 PTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTR 284
P + + VGK P VE+KV ++ G + TR
Sbjct: 343 PI--------------------EKRVKTVGKKHPGVEIKVVDPVTNEEVAIGQPGELCTR 382
Query: 285 GAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEE 344
G HVM Y+ A + E WL TGD+ +D+ G V + GR I GGEN+YP E
Sbjct: 383 GYHVMKGYYKMPDATMAAIDQEGWLHTGDLAVMDEDGYVTITGRLKDMIIRGGENIYPRE 442
Query: 345 VEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEV 404
VE L HP I+ + V+G+ + + E V A +RL+E Q +S+E
Sbjct: 443 VEEFLYSHPAILDVQVIGVPDEKYGEKVAASIRLKEGKQ----------------VSAEE 486
Query: 405 LRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR---REVMSHLKSLPS 456
+ +C + FK P ++ + K +P+T++GKI++ ++R R+++S K + S
Sbjct: 487 IITYCT-GQIAKFKIPE-YIFFVKEYPMTASGKIQKYKLREEARQLISRTKGIMS 539
>gi|126435503|ref|YP_001071194.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
gi|126235303|gb|ABN98703.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
Length = 491
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 177/389 (45%), Gaps = 45/389 (11%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
APE + FTSG+TG+PKGVV SH +++ + VYL P+CHI G +
Sbjct: 147 APEDPAWLLFTSGSTGTPKGVVHSHRSILAAVQGSVIGRAVPRGGVYLLPFPMCHIAGYN 206
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+ V A V +F + + + VT+ P ++ A L ++ T +
Sbjct: 207 -MLVQHAVAATVVLAAQFRADAIARTINDCAVTACSLAPTMLH--ALLDHLRATGATLPT 263
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ I G +P+EL++ A YGMTET ++TF+ PG +
Sbjct: 264 LRSIAYGSAAIPAELLRTALERL-DVDFHQGYGMTETGGNVTFLG--------PGDHRRG 314
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSV 302
H G+P PHVE+++ DG IL RG V YW S
Sbjct: 315 LAG------HPAILAGAGRPHPHVEVRIGDDGE-----ILVRGPQVATSYWRGR----SA 359
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
GE WL TGDIG ID GN+++V RR + +GGENV EVE VL HP + VVG
Sbjct: 360 VDGEGWLATGDIGRIDADGNLYVVDRRRDIVVTGGENVSSREVEDVLTDHPEVESAAVVG 419
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + E V A V E +ES L +H R + LTGFK PR
Sbjct: 420 VPDEYWGEAVCAVVVAAEGRHPTES----------------ALVEHVRAR-LTGFKRPR- 461
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
VL+ PLT+ GKI ++ VRR S L
Sbjct: 462 HVLFVDALPLTTNGKIDKNRVRRLARSAL 490
>gi|108799860|ref|YP_640057.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119868970|ref|YP_938922.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
gi|108770279|gb|ABG09001.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119695059|gb|ABL92132.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
Length = 491
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 177/389 (45%), Gaps = 45/389 (11%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
APE + FTSG+TG+PKGVV SH +++ + VYL P+CHI G +
Sbjct: 147 APEDPAWLLFTSGSTGTPKGVVHSHRSILAAVQGSVIGRAVPRGGVYLLPFPMCHIAGYN 206
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+ V A V +F + + + VT+ P ++ A L ++ T +
Sbjct: 207 -MLVQHAVAATVVLAAQFRADAIARTINDCAVTACSLAPTMLH--ALLDHLRATGATLPT 263
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ I G +P+EL++ A YGMTET ++TF+ PG +
Sbjct: 264 LRSIAYGSAAIPAELLRTALERL-DVDFHQGYGMTETGGNVTFLG--------PGDHRRG 314
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSV 302
H G+P PHVE+++ DG IL RG V YW S
Sbjct: 315 LAG------HPAILAGAGRPHPHVEVRIGDDGE-----ILVRGPQVATSYWRGR----SA 359
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
GE WL TGDIG ID GN+++V RR + +GGENV EVE VL HP + VVG
Sbjct: 360 VDGEGWLATGDIGRIDADGNLYVVDRRRDIVVTGGENVSSREVEDVLTDHPEVESAAVVG 419
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + E V A V E +ES L +H R + LTGFK PR
Sbjct: 420 VPDEYWGEAVCAVVVAAEGRHPTES----------------ALIEHVRAR-LTGFKRPR- 461
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
VL+ PLT+ GKI ++ VRR S L
Sbjct: 462 HVLFVDALPLTTNGKIDKNRVRRLARSAL 490
>gi|418461131|ref|ZP_13032210.1| AMP-binding domain protein [Saccharomonospora azurea SZMC 14600]
gi|359738785|gb|EHK87666.1| AMP-binding domain protein [Saccharomonospora azurea SZMC 14600]
Length = 547
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 190/402 (47%), Gaps = 53/402 (13%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
S + + + I +TSGTTG PKG +SH ++ + Y E+D P H G
Sbjct: 181 SLSADDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGQLCDYTEEDRICLPVPFYHCFG 240
Query: 121 LSSA-MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTW 177
+ +A GAC V P F+ ++ LEAV+ TSL VP + +A+LA +
Sbjct: 241 MVMGNLAATSHGACMVIPAPAFDPRATLEAVQAERCTSLYGVPTMFIAELAV-----PGF 295
Query: 178 KGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
+ D S++ + G P E+MK+ +++ YGMTETS T T D ++E
Sbjct: 296 EDYDLGSLRTGIMAGSPCPVEVMKQVIERMGMSEVSICYGMTETSPVST-QTRKDDSIER 354
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVM 289
+ VG+ PH+E+KV + G + TRG VM
Sbjct: 355 -------------------RVSTVGRVGPHLEVKVVDPETGLTVPRGTPGELCTRGYSVM 395
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
L YW+Q V W+ TGD+ +DD G + + GR + GGENVYP E+E L
Sbjct: 396 LGYWEQPEKTAEVIDAARWMHTGDLAVMDDDGYLSITGRIKDLVIRGGENVYPREIEEFL 455
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
HP I+ V+G+ +A+ E ++A VR+R+ + +++E LR+ C
Sbjct: 456 YSHPDILDAQVIGVPDAKYGEELMAWVRMRDGAE---------------PVTAESLREFC 500
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ L +K PR +V FP+T TGKIR+ E+R + + L
Sbjct: 501 TGR-LAHYKIPR-YVHVVDEFPMTVTGKIRKVEMREKAVELL 540
>gi|395764069|ref|ZP_10444738.1| AMP-binding domain protein [Janthinobacterium lividum PAMC 25724]
Length = 559
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 205/445 (46%), Gaps = 49/445 (11%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 74
L+ + +P LR + LG++++ ++ D L I + + + AV I FTS
Sbjct: 151 LRSSRLPQLRHVIRLGAAATPGMHNFDALMEGISDADLAHLEEVSATLQFDDAVNIQFTS 210
Query: 75 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGAC 133
GTTG+PKG ++H +I + E D PL H G+ +A + GA
Sbjct: 211 GTTGAPKGATLTHHNIINNGFFIGEAMRLTEHDRLCIPVPLYHCFGMVLGNLACVTHGAA 270
Query: 134 HVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
VF + F+ KS L V+ T L VP + +A L +++ + G
Sbjct: 271 MVFPGEGFDPKSVLGTVQAERCTGLHGVPTMF--IAILDHPDFKQYDLSTLRTGIMAGSP 328
Query: 193 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 252
P E+M A++ AYGMTETS ++F T D P+A + VH
Sbjct: 329 CPMEVMTRVIELMHMAEITIAYGMTETSP-VSFQTSIDD--------PRAMRVASIGRVH 379
Query: 253 QPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAKPSVSTGE 306
PH+E+K+ V G +LTRG VM YW D + ++ T
Sbjct: 380 -----------PHLEVKIIDAQGRIVPRGEKGELLTRGYSVMQGYWGDPEKTREAIDTAR 428
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
W+ TGD+ IDD G +VGR + GGEN+YP EVE L +HP ++ + VG+ +A
Sbjct: 429 -WMHTGDLAVIDDKGFCSIVGRSKDMVIRGGENIYPREVEEFLYRHPSVLDVQCVGVPDA 487
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E + AC+ LR Q SSE +R C + + +K PR +V +
Sbjct: 488 KYGEELCACIILRPGMQ----------------ASSEDIRAFC-DGQIAYYKIPR-YVRF 529
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHL 451
+ FP+T TGKI++ +R++V + L
Sbjct: 530 VEQFPMTVTGKIQKYLLRQQVATDL 554
>gi|425734007|ref|ZP_18852327.1| AMP-binding domain protein [Brevibacterium casei S18]
gi|425482447|gb|EKU49604.1| AMP-binding domain protein [Brevibacterium casei S18]
Length = 561
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 190/404 (47%), Gaps = 47/404 (11%)
Query: 51 YSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYL 110
Y++R + + + I +TSGTTG PKGV +SH ++ ++ Y DD +
Sbjct: 189 YAVRLEQAAGELSADDPINIQYTSGTTGFPKGVTLSHHNILNNGYFIAELLSYTPDDSVV 248
Query: 111 HTAPLCH-IGGLSSAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLA 168
+ P H G + +A L GA V P F+ ++L AV + TSL VP + +A
Sbjct: 249 LSVPYYHCFGMVMGNLAALSHGASIVLPSPGFDPAASLTAVAEEKATSLYGVPTMF--IA 306
Query: 169 TLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL 228
L + S++ + G P E+M+ + +++ YGMTETS ++ MT
Sbjct: 307 ELGLPDFSDFDLSSLRTGIMAGSPCPVEVMRHVIHDMNMSEVAICYGMTETSP-VSTMTR 365
Query: 229 YDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRIL 282
D +LE + VG+ PHVE+K+ + G +
Sbjct: 366 VDDSLEARTE-------------------TVGRVMPHVEVKIVDPVTGQTMPRGQKGELC 406
Query: 283 TRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYP 342
TRG VML YW++ W+ TGD+ +DD G V + GR + GGENVYP
Sbjct: 407 TRGYSVMLGYWEEPEKTAEAIDSARWMHTGDLAIMDDDGYVDISGRIKDMVIRGGENVYP 466
Query: 343 EEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSS 402
E+E L QHP I + V+G+++ + E ++A V L++ + L++
Sbjct: 467 REIEEFLYQHPAISDVQVIGVSDEKYGEELMAWVILKDGYD---------------TLTA 511
Query: 403 EVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
E +R+ + L FK PR +V R FP+T +GKIR+ E+R E
Sbjct: 512 EDVREFAAGR-LAHFKIPR-YVEVRDSFPMTVSGKIRKVELREE 553
>gi|226187505|dbj|BAH35609.1| putative fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
Length = 515
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 192/384 (50%), Gaps = 48/384 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAML 128
I +T GT+G PKGV+++H+ L+ SL +A G D + L TAP+ H+ L++ +
Sbjct: 163 IFYTGGTSGHPKGVMLTHANLVTSSLGAVASNRTPGTDGLALITAPMFHLASLANWIGRN 222
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR-VKKTWKGRDSVKKIL 187
VGA V P FE +AL +EQH VTS++ VP + + LIR +T + S+ +
Sbjct: 223 TVGATLVIQPSFEPATALRLIEQHKVTSMLLVPTM---IQMLIRHPDRTNRDLSSILAVQ 279
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G + L+++A +FP+A + YGMTE LT ++ D
Sbjct: 280 YGASPISETLLRQAQQAFPQAAFMQGYGMTEAGPGLTSLSAED----------------- 322
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSV 302
V + G+P HVE++V + + VG I+ RG ++M YW++ S
Sbjct: 323 --HVDATRLKSAGRPMGHVEIQVVDENGNELPRGEVGEIIARGGNIMCGYWNRPEETRS- 379
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ + WL TGD G +D+ G +++V R I SGGENVY EVE L HP +I V+G
Sbjct: 380 ALRDGWLYTGDGGYMDEAGYLFVVDRLKDMIISGGENVYSTEVENALATHPDVISCAVIG 439
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + + E V A + +R + L+ E +R H + + G+K+PR
Sbjct: 440 VPDDQYGERVHAVLVVRPG----------------VSLTCEEVRAHSKTL-IAGYKSPRS 482
Query: 423 FVLWRKPFPLTSTGKIRRDEVRRE 446
+ + P++ GKI + E+RR+
Sbjct: 483 ITIVEQ-MPVSPAGKILKRELRRQ 505
>gi|453050271|gb|EME97816.1| AMP-binding domain protein [Streptomyces mobaraensis NBRC 13819 =
DSM 40847]
Length = 543
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 182/397 (45%), Gaps = 47/397 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLS 122
PE V I +TSGTTG KG +SH ++ +GY E+D P H G +
Sbjct: 181 PEDPVNIQYTSGTTGFAKGATLSHRNILNNGYFVGETLGYTEEDRIALPVPFYHCFGMVM 240
Query: 123 SAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+A GAC V P F+ + L AVE+ TSL VP + +A L
Sbjct: 241 GNLAATTHGACVVIPAPVFDPTATLHAVERERCTSLYGVPTMF--IAELDLPDFATYDLS 298
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P+E+MK ++ YGMTETS T D L +
Sbjct: 299 SLRTGIMAGSPCPAEVMKRVVAEMHMEEVTICYGMTETSPVSTQTRRED-------DLDR 351
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 295
G V G+ PH+E+K+ + G + TRG VML YW++
Sbjct: 352 RTGTV-------------GRVLPHIEVKIVDPETGATVPRGEHGELCTRGYSVMLGYWNE 398
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
+ W+ TGD+ +D+ G V +VGR I GGENVYP E+E L HP I
Sbjct: 399 PERTAEAIDADRWMHTGDLAVMDEEGYVRIVGRSKDMIIRGGENVYPREIEEFLHTHPKI 458
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ V+G+ + R+ E ++ACV L + LS + L ++CR + L
Sbjct: 459 ADVQVIGVPDDRMGEEIMACVILHDDAGG---------------LSRDELARYCRGR-LA 502
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+K PR ++ + FP+T +GK+R+ E+R E ++ L+
Sbjct: 503 HYKVPR-YLRVMESFPMTVSGKVRKVELREEAVALLE 538
>gi|377575599|ref|ZP_09804589.1| putative long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius
NBRC 104925]
gi|377535715|dbj|GAB49754.1| putative long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius
NBRC 104925]
Length = 500
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 187/394 (47%), Gaps = 58/394 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSAM 125
++ +TSGTTG PKG + H L +QS ++ ++ EDDV + PL H+ G++ AM
Sbjct: 150 VLLYTSGTTGRPKGAELMH--LNLQSNQRVTGDVLIHATEDDVVMGCLPLFHVFGMTCAM 207
Query: 126 AM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV--KKTWKGRDS 182
M VGA IP+FE AL+ + + VT VP + L + T G D+
Sbjct: 208 NMAFAVGATLTLIPRFEPAKALDMLRRDRVTVFFGVPTMYGALLAAAGALPEGTDLGIDA 267
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ ++GG +P ELM+ F ++ YG++E+S + +F
Sbjct: 268 LRVCISGGASMPVELMRRFEARF-GCMILEGYGLSESSPAASFNQ--------------- 311
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVC---------SDGSSHVGRILTRGAHVMLRYW 293
P++ +P VG P P VE+K+ S + +G I RG ++M YW
Sbjct: 312 -----PHAERKPG--SVGFPVPGVEMKLVPVAVEGDEGSAAAEGLGEIAIRGENIMRGYW 364
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
+ A +V + W TGD+G +D+ G ++V R I GG NVYP EVE VL +HP
Sbjct: 365 NNPEATAAVLDEDGWFRTGDMGRVDEDGYYYIVDRAKDLIIRGGYNVYPREVEEVLYEHP 424
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
+ + VVG+ + + E V A V R + E LR+ +E+
Sbjct: 425 AVAEVAVVGMTHEQYGEEVGAYVVARAGHS----------------IDVEELREFAKER- 467
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 447
+ +K PR+ + + P +TGKI + E+ R+V
Sbjct: 468 VAAYKYPRVIRILEE-LPKGATGKILKRELPRDV 500
>gi|323489937|ref|ZP_08095158.1| long-chain-fatty-acid--CoA ligase [Planococcus donghaensis MPA1U2]
gi|323396233|gb|EGA89058.1| long-chain-fatty-acid--CoA ligase [Planococcus donghaensis MPA1U2]
Length = 563
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 197/406 (48%), Gaps = 62/406 (15%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSL---AKIAIVGYGEDDVYLHTAPLCHIGGL 121
E ++ +T GTTGSPKGV+++H LI + + + GE+ + + PL H+ GL
Sbjct: 206 EDLALLQYTGGTTGSPKGVMLTHKNLISNATMCDSWLYKCKKGEETI-MGIIPLFHVYGL 264
Query: 122 SSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
++ + + +M+G V +PKF+ ++AL+ + + T P + L + K
Sbjct: 265 TTVLILSVMLGNKMVLLPKFDPETALKTINKQKPTLFPGAPTLYIGLMNHPDIAKY--DL 322
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
S++ L+G LP+E+ +E + KL+ YG+TETS ++ L
Sbjct: 323 SSIEACLSGSAPLPAEV-QEKFEALTGGKLVEGYGLTETSP-VSHSNL------------ 368
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWD 294
+G T SV G P P + K+ G++ +G I +G VM YW+
Sbjct: 369 -VWGERTKGSV--------GLPYPDTDSKIFQTGTTTPIPNGEIGEIAIKGPQVMKGYWN 419
Query: 295 QFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
KP + + WL TGD+G +DD G+ ++V R+ I +GG N+YP E+E VL +
Sbjct: 420 ----KPEETAATIVDGWLLTGDLGYMDDEGHFFIVDRKKDMIIAGGFNIYPREIEEVLYE 475
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
H + VV GI + E V A + L+E + +E E L +CRE
Sbjct: 476 HEAVQECVVAGIPDPYRGETVKAYIVLKEGYTVTE----------------EELNTYCRE 519
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKI-RRDEVRREVMSHLKSLPS 456
+ L FK PR++ +RK P T+ GKI RR V EV +++PS
Sbjct: 520 Q-LASFKVPRIYE-FRKELPKTAIGKILRRSLVDEEVAKQNEAVPS 563
>gi|34497235|ref|NP_901450.1| AMP-binding protein [Chromobacterium violaceum ATCC 12472]
gi|34103091|gb|AAQ59454.1| probable long chain fatty-acid CoA ligase [Chromobacterium
violaceum ATCC 12472]
Length = 562
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 198/445 (44%), Gaps = 47/445 (10%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
ELQ +P+LRW + +G + L A+ + + A I FT
Sbjct: 150 ELQSVRLPALRWVLRIGQQRLPGMLAFSELLAEPSADELAALQALGAALRADEAANIQFT 209
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVGA 132
SGTTG PKG +SH ++ + A + DD PL H G+ + L GA
Sbjct: 210 SGTTGHPKGATLSHRNILNNAWFVGAAMRLEADDRLCIPVPLYHCFGMVMGTLCCLCRGA 269
Query: 133 CHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
VF + F+ S LE V++ T+L VP + +A L + S++ + G
Sbjct: 270 AMVFPGEGFDPLSVLETVQEERCTALHGVPTMF--IAMLDHPRFAEFDLSSLRTGIMAGS 327
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P E+M+ + A++ YGMTETS P + + T +
Sbjct: 328 PCPVEVMRRVIDRMHMAEVTICYGMTETS-------------------PVSLQSATDTPL 368
Query: 252 HQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGE 306
Q VG PHVELK+ V G + RG VML YW+ + E
Sbjct: 369 EQRVST-VGSAHPHVELKIVDAEGGVVPRGQSGELCVRGYSVMLGYWEDEAMTRAAIDAE 427
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
W+ TGD+ S+ + G+V +VGR + GGENVYP E+E L +HP I + V+G+ +A
Sbjct: 428 GWMHTGDLASMREDGSVNIVGRVKDMVIRGGENVYPREIEEFLYRHPKIQDVQVIGVPDA 487
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
R E + A +RLR+ +E + +R C + + +K PR ++ +
Sbjct: 488 RYGEELCAWIRLRDGECATEED----------------IRSFC-QGQIAHYKIPR-YIEF 529
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHL 451
FP+T TGKI++ +RR ++ L
Sbjct: 530 VDSFPMTVTGKIQKYLMRRTMVEKL 554
>gi|449479413|ref|XP_004176398.1| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member
2, mitochondrial [Taeniopygia guttata]
Length = 661
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 189/400 (47%), Gaps = 58/400 (14%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-----APLCH-IGGL 121
+ I FTSGTTGSPKG +SH IV + + + D V L + APL H + +
Sbjct: 304 INIQFTSGTTGSPKGATLSHRN-IVNNANLVGLRLGITDQVGLESRSGLPAPLYHCLASV 362
Query: 122 SSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
M M + G +F P FE K+ALEAV + + L+ P + D+ + + +
Sbjct: 363 GGCMVMALHGTSCIFSSPSFEGKAALEAVSREKCSFLLGTPTMFIDMLS----QPDFDSY 418
Query: 181 D--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
D +++ + G +P E M+ +L+ AYG TE +S +TFM
Sbjct: 419 DLSTLRGGIIAGSPVPPETMRTIITKMHMPELVVAYGTTE-NSPVTFMGF---------- 467
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRY 292
PN + VG PH E K+ + G + RG VML Y
Sbjct: 468 ---------PNDNMDQKTETVGYIFPHTEAKIEDPETGQSVPLNAPGELQIRGYCVMLGY 518
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
W+ V T E W TGD+ ++++ G ++GR I GGEN+YP E+E L H
Sbjct: 519 WNDPAKTSDVITAERWYKTGDLATLNEHGYCRIIGRCKDMIIRGGENIYPSELEQFLHTH 578
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P + + VVG+ ++R+ E + AC+RLR SE E ++ C+ K
Sbjct: 579 PKVEEVQVVGVKDSRMGEEICACIRLRAGQDCSE----------------EEIKAFCKGK 622
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
++ FK P L+V++ +PLT +GKI++ ++R ++ HL+
Sbjct: 623 -ISHFKIP-LYVVFVSQYPLTVSGKIQKYKLREQMEKHLQ 660
>gi|344173641|emb|CCA88810.1| long-chain-fatty-acid-CoA ligase [Ralstonia syzygii R24]
Length = 571
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 218/452 (48%), Gaps = 62/452 (13%)
Query: 15 LQHTAIPSLRWHVSLGSSSS-DFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICF 72
LQ +P+LRW + +G ++ +N +++ +G S +L T + +P+ A+ I F
Sbjct: 161 LQAAKLPALRWVIRMGEGATPGTINFGEVMARG--QGVSTGTLDAITAALSPDDAINIQF 218
Query: 73 TSGTTGSPKGVVISHSALIVQS-LAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMV 130
TSGTTG+PKG ++H ++ + +A+ G D + + PL H G+ S +A
Sbjct: 219 TSGTTGAPKGATLTHVNIVNNARFVAMAMNLQGTDRLCI-PVPLYHCFGMVMSVLACTAT 277
Query: 131 GACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GAC VF + F+ + L V + T+L VP + + ++ GR V + G
Sbjct: 278 GACMVFPGEAFDPLATLRTVAEERCTALHGVPTMF-----IAQLDHPEFGRFDVSSLRGG 332
Query: 190 ---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
G P E+MK ++ AYGMTETS P +F +
Sbjct: 333 IMAGSPCPIEVMKRVVAEMSLCEITIAYGMTETS-------------------PVSFQSA 373
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 300
+ + + + VG+ PH+E+K+ DG+ V G + T+G VML YWD AK
Sbjct: 374 VTDPLDK-RVTTVGRIQPHLEVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD-EAKT 430
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+ S + W+ TGD+ + D G +VGR + GGENVYP E+E L +HP + + V
Sbjct: 431 AESIRDGWMRTGDLATFDVDGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNV 490
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
G+ + + E V A + L+ Q +E E +R+ C+++ + +K P
Sbjct: 491 FGVPDPKYGEEVCAWIVLKPGQQATE----------------EEIREFCKDQ-IAHYKIP 533
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
R ++ + P+T TGK+++ +R ++ LK
Sbjct: 534 R-YIRFVTEMPMTVTGKVQKFVMRERMIEALK 564
>gi|384179904|ref|YP_005565666.1| acyl-CoA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324325988|gb|ADY21248.1| acyl-CoA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 496
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 183/393 (46%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE AL +E+H VT ++ VP I L + + T +V+
Sbjct: 210 FPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQAVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E N + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFIN---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP E ++ + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCEYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRLDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
K ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TKEAIQDG--WLYTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG R+ +W E+ K +L+ + + +HCR L +
Sbjct: 422 VAVVG----------------RQHGKWGETPIAFIVKKSSSVLTEKEVIEHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ V + FP +TGKI++ ++ ++ S
Sbjct: 465 KIPKEIVFLEE-FPKNATGKIQKAQLANQLKSR 496
>gi|260363738|ref|ZP_05776514.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus K5030]
gi|308114927|gb|EFO52467.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus K5030]
Length = 513
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 191/388 (49%), Gaps = 58/388 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG ++ +++ +L I+ DDV+L T PL H G + + A
Sbjct: 172 VILYTSGTTGLPKGAELTQQNIVMNALVAQNIMASQADDVHLVTLPLFHTFGQTVHLNAS 231
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ GA V +P+F+ K LE +E+H VT VP + L + V+ S++ +
Sbjct: 232 VQSGATLVLVPRFDPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNCD-ISSLRVAV 287
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
+GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 288 SGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG---------- 334
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+P VE+KV DG + G I+ RG +VM Y D +P V
Sbjct: 335 ----------SVGQPIQGVEVKVVDLDGHTLPVGEEGEIIVRGHNVMKGYLD----RPEV 380
Query: 303 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP + +
Sbjct: 381 TESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVAMVA 440
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+GI + E + A V L+ + Q+ E++ EL L RE+ L FK
Sbjct: 441 VIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LANFKY 483
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREV 447
P+ FV R+ P+++TGKI + E++ E+
Sbjct: 484 PK-FVEIREQLPMSATGKILKRELKSEL 510
>gi|374705636|ref|ZP_09712506.1| AMP-binding domain protein [Pseudomonas sp. S9]
Length = 556
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 210/448 (46%), Gaps = 53/448 (11%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-SDFVNKRDMLT-ADILKGYSLRSLPFT-HSWAPEGAVII 70
+L + +P LR +SL + + F++ R++ A+ + L + T H E A+ I
Sbjct: 150 QLASSRLPELRGVISLADQAPAGFLHWRELAELAETVNAEQLAARQATLHC---EQAINI 206
Query: 71 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLM 129
+TSGTTG+PKG +SH ++ +G E D + PL H G+ + +
Sbjct: 207 QYTSGTTGAPKGATLSHFNILNNGYMVGESLGLSEHDRMVIPVPLYHCFGMVMGNLGCVT 266
Query: 130 VGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
G+ ++ FE +++L+AV Q T L VP + +A L + S++ +
Sbjct: 267 HGSTMIYPCAGFEPEASLQAVAQERATVLYGVPTMF--IAELDHPRLKAFDLSSLRTGIM 324
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G P E+M+ +++ AYGMTETS ++ T D LE VT
Sbjct: 325 AGATCPIEVMRRVIKELHMSEVQIAYGMTETSP-VSLQTAADDALEV---------RVTS 374
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
VG+ P +E K+ + + V G + TRG VML YW+ A
Sbjct: 375 ----------VGRTQPQLESKIIDEQGAIVSRGQTGELCTRGYSVMLGYWNNPQASAEAI 424
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
E W+ TGD+ +D+ G V +VGR I GGEN+YP E+E L H I + V+G+
Sbjct: 425 DTEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLFTHAAIADVQVIGV 484
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+++ E + ++L S CD++ LR++C+ N+ FK PR +
Sbjct: 485 PDSKYGEEIAVWIKLHPG-----SGCDENQ-----------LREYCK-ANIAYFKVPRYY 527
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ FP+T TGKI++ +R + ++ L
Sbjct: 528 -RFVDEFPMTVTGKIQKFRMREQTIAEL 554
>gi|392406245|ref|YP_006442855.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
gi|315024178|gb|ADT71659.1| putative acyl-CoA synthetase [Mycobacterium chubuense NBB4]
gi|390619381|gb|AFM20530.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
Length = 543
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 189/403 (46%), Gaps = 62/403 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + GY E D P H G+ +A
Sbjct: 188 IQYTSGTTGFPKGATLSHQNILNNGFFVGELCGYSEADRICIPVPFYHCFGMVMGNLAAT 247
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVK 184
GAC V P FE+++ L+A+E TSL VP + +A+LA + D S++
Sbjct: 248 SHGACMVIPAPSFEARTTLQAIETERCTSLYGVPTMFIAELA-----DSAFGDFDLTSLR 302
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E+MK+ + ++ YGMTETS ++ T D ++E
Sbjct: 303 TGIMAGSPCPVEVMKQVLDRMGITEITICYGMTETSP-VSIQTRADDSIER--------- 352
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 298
+ VG PH+E+K+ + G + TRG VML YW+
Sbjct: 353 ----------RVSTVGTVHPHLEIKIVDPETGATVLRGSPGELCTRGYSVMLGYWE---- 398
Query: 299 KPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
+P ++G + W+ TGD+ +DD G V ++GR + GGEN+YP E+E L HP
Sbjct: 399 RPDWTSGAIDAARWMHTGDLAVMDDAGYVSIIGRNKDMVIRGGENLYPREIEEFLYTHPE 458
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
I+ + V+G+ + + E ++A +R++E Q L+ E L C K L
Sbjct: 459 IVDVQVIGVPDPKYGEELMAWIRMKEGAQ---------------PLTREDLHGFCAGK-L 502
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 457
+K PR + FP+T TGK+R+ E+ RE+ L LP
Sbjct: 503 AHYKIPR-YAHVVDEFPMTVTGKVRKVEM-REIAIRLLKLPEQ 543
>gi|389730176|ref|ZP_10189351.1| acyl-CoA synthetase [Rhodanobacter sp. 115]
gi|388440948|gb|EIL97268.1| acyl-CoA synthetase [Rhodanobacter sp. 115]
Length = 561
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 205/468 (43%), Gaps = 65/468 (13%)
Query: 10 SWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLR------------SLP 57
S YLEL H +P L +S+ R+++ D + R +L
Sbjct: 131 SHYLELLHELVPELDAATPGALASARLPELREVILLDDEAAHGTRLWCELVGLGDTATLA 190
Query: 58 FTHSWAPE----GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA 113
H E V I FTSGTTG+PKG ++H ++ + E D
Sbjct: 191 HLHEAERELGFDDPVNIQFTSGTTGAPKGATLTHHNIVNNGWFIGEAMRLTEHDRLCIPV 250
Query: 114 PLCHIGGLS-SAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATL 170
P H G+ +A + GAC V IP F++ + LE V T L VP + +A L
Sbjct: 251 PFYHCFGMVLGNLACVTHGACMV-IPGEGFDALATLETVAAEKCTGLHGVPTMF--IAEL 307
Query: 171 IRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD 230
+ S++ + G P E+M+ A++ AYGMTETS ++F TL +
Sbjct: 308 EHPRFAEFDLSSLRTGIMAGSPCPIEVMRRVVGEMHMAEVTIAYGMTETSP-VSFQTLPE 366
Query: 231 PTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK-VCSDGS----SHVGRILTRG 285
LE + +G+ PHVE+K V +DG G + TRG
Sbjct: 367 DPLER-------------------RVDSIGRVHPHVEVKLVDADGRIVPRGEPGELCTRG 407
Query: 286 AHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 345
VML YW W+ TGD+ ++DD G +VGR I GGENVYP E+
Sbjct: 408 YSVMLGYWQDEARTREAIDAAGWMHTGDLATLDDDGYCRIVGRLKDMIIRGGENVYPREI 467
Query: 346 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 405
E L HP ++ + V G+ +A+ E V A VRLRE Q SE+ +
Sbjct: 468 EEFLYTHPKVLDVQVFGVPDAKFGEQVCAWVRLREGTQASEAE----------------I 511
Query: 406 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
+ +CR + L +K P +V + FP+T TGK+++ +R + + L +
Sbjct: 512 QDYCR-RRLAYYKVPH-YVRFVDAFPMTVTGKVQKYLMREAMATELAA 557
>gi|421872046|ref|ZP_16303665.1| AMP-binding enzyme family protein [Brevibacillus laterosporus GI-9]
gi|372458658|emb|CCF13214.1| AMP-binding enzyme family protein [Brevibacillus laterosporus GI-9]
Length = 528
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 180/384 (46%), Gaps = 50/384 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-ML 128
I +TSGT PKG +++H LI Q ++ I E D+ +H PL H L + L
Sbjct: 177 IMYTSGTESKPKGAMLTHKNLIAQYMSVILDGDLTEQDILVHALPLFHSAQLHCFLGPHL 236
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
VGA + LE VE++ T L P + +A L + S++K
Sbjct: 237 YVGASGTILEHAAPALMLETVERYGATQLFCPPTVW--IALLRSEDFAARNLSSLQKCYY 294
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G +P E++KE P++KL + YG TE + T + +D +T
Sbjct: 295 GAAIMPVEIIKELGMRLPQSKLYNFYGQTEIAPLATVLKPHDQLRKTGS----------- 343
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYW-DQFLAKPSV 302
GKPA HVE K+ + + H+G I+ R +H+ML Y+ D+ + +
Sbjct: 344 ----------AGKPALHVETKIVDESGNEVPIGHIGEIVHRSSHIMLGYFKDEEKTRSAF 393
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
G W +GD+GS+D+ G + +V R+ IK+GGENV E+E + QHP + + V+G
Sbjct: 394 QGG--WFHSGDLGSMDEEGYITVVDRKKDMIKTGGENVASREIEEWIYQHPKVSEVAVIG 451
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + E V A V +N + + +ELL Q C+ K L+ FK P+
Sbjct: 452 IPHPYWIEAVTAIVV---------ANAGEEIETEELL-------QFCK-KGLSSFKVPK- 493
Query: 423 FVLWRKPFPLTSTGKIRRDEVRRE 446
FV+ P +GKI + E+RR+
Sbjct: 494 FVVVTDQLPRNPSGKIVKRELRRQ 517
>gi|334339638|ref|YP_004544618.1| AMP-dependent synthetase and ligase [Desulfotomaculum ruminis DSM
2154]
gi|334090992|gb|AEG59332.1| AMP-dependent synthetase and ligase [Desulfotomaculum ruminis DSM
2154]
Length = 554
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 190/403 (47%), Gaps = 57/403 (14%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IG 119
S P+ + + +TSGTTG PKGV+++H+ L+ + + + + E D L T P H G
Sbjct: 186 SLDPDDCINMQYTSGTTGFPKGVMLTHTNLVNNAHSIANCMAFSERDRLLITVPFFHCFG 245
Query: 120 GLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
+ M ++ GA V + F LE V+Q T+L VP + ++ +++ KG
Sbjct: 246 CVLGTMTCVVSGATMVPLEVFNPVRVLEIVDQERCTALHGVPTMF-----IMELEELAKG 300
Query: 180 RDSVKKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
V + G G P E+MK + ++ YG TE S ++T DP
Sbjct: 301 NYDVSSLRTGIMAGSPCPIEVMKAVVDRMGMKEITITYGQTEASPAITMTRTDDPI---- 356
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHV 288
+ + VGK P+VE K+ C G G I +RG +V
Sbjct: 357 ----------------ELRVATVGKVIPNVEAKIVDPETGEDCPPGIQ--GEICSRGYNV 398
Query: 289 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 348
M Y+ A + WL TGD+G +D+ G + GR I GGENVYP E+E
Sbjct: 399 MKGYYKMPEATAQAIDQDGWLHTGDLGIMDEKGYFKITGRLKDMIIRGGENVYPREIEEF 458
Query: 349 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 408
L HP I + VVG+ + + E V+A V+LRE + L+ E ++ +
Sbjct: 459 LYTHPLIKDVQVVGVPSMKYGEEVLAYVQLREG----------------VTLTKEEIQDY 502
Query: 409 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
CR+K + +K P +VL+ +P+T++GKI++ ++R + ++ L
Sbjct: 503 CRDK-IAKYKIPS-YVLFIDHYPITASGKIQKYKLREQAITAL 543
>gi|441506878|ref|ZP_20988806.1| putative fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
gi|441448943|dbj|GAC46767.1| putative fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
Length = 545
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 182/399 (45%), Gaps = 45/399 (11%)
Query: 53 LRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT 112
++PF PE A + +TSGTTG PKG +++H +L S A +A + D V +
Sbjct: 171 FEAVPFD----PETAFLQLYTSGTTGHPKGAMLTHHSLGAHSAAAVAGFHFTGDSVNMVA 226
Query: 113 APLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR 172
PL H+GG S A+A + VGA V + + + L+ + VT VPA+ L +
Sbjct: 227 MPLFHVGGSSWALAAMSVGAQTVIVRETIPAAILDEIVARAVTHAFFVPAVYGFLLADPQ 286
Query: 173 VKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT 232
V + + +V+ GG +P ++ ++P YGMTE S + DP
Sbjct: 287 VAE--RDYSTVRCFGYGGSPMPLPTIRACLKTWPGVDFYQVYGMTEMSGVFCVL---DPA 341
Query: 233 LETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAH 287
+ P+ V G+P P V +KV +G + VG T+
Sbjct: 342 DHRDVEHPERL-------------VSAGRPLPGVTVKVVDPEGKTVAPGEVGEFWTQSEQ 388
Query: 288 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 347
ML YWD+ G+ WL TGD G +D G +++ R I +GGENVYP EVE
Sbjct: 389 HMLGYWDKPQETAETLVGDDWLRTGDAGHMDADGYLFISDRVKDMIITGGENVYPVEVER 448
Query: 348 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 407
V+++H + + V+G+ + + E V A + L + +E L
Sbjct: 449 VVIEHDAVADVAVIGVPDTKWGESVKAVIVLSPGAEVTEDE----------------LVA 492
Query: 408 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
HCR + L G+K P+ + P STGKI + E+R+E
Sbjct: 493 HCRAR-LAGYKVPKSVDI-VPDLPRNSTGKILKREIRKE 529
>gi|443476927|ref|ZP_21066807.1| 2-succinylbenzoyl-CoA synthetase [Pseudanabaena biceps PCC 7429]
gi|443018020|gb|ELS32344.1| 2-succinylbenzoyl-CoA synthetase [Pseudanabaena biceps PCC 7429]
Length = 534
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 181/386 (46%), Gaps = 45/386 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKGV +++ ++A +G DD +L P+ H+GGL+ +
Sbjct: 184 IFYTSGTTGKPKGVPLTYGNHFHSAIASALNLGLQSDDNWLLCMPMFHVGGLAIIWRSAI 243
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G +PKF+ + LEA+ VT + VP ++ L W+ ++ IL G
Sbjct: 244 YGTKLTLLPKFDEREVLEAIASERVTLISLVPTMLTRLLE----HSLWQNLQQLRGILLG 299
Query: 190 GGGLPSELMKEATN-SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G EL+ + P ++ YGMTET+S +T + + L+ GN
Sbjct: 300 GAPASPELIAHGQQLNLP---IMPTYGMTETASQITTLRTEEIALKQGSSGLPLLGNSLR 356
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYW-----DQFLAKPSVS 303
V EL S +G+IL +GA VM Y D+ + S
Sbjct: 357 ---------IVDLDDAQRELP-----SGEIGQILVQGASVMSGYLHTDHTDRTDRQQSQF 402
Query: 304 TG--EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
G + WL TGD+G +D G +++V RR+ I SGGEN+YP E+E +LL HP I VV
Sbjct: 403 QGIADGWLHTGDMGYLDRDGYLYVVSRRSDLIISGGENIYPTEIETILLSHPAIAEACVV 462
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI + E V A + + N +L L+ +R C +K+L +K P+
Sbjct: 463 GILDREWGEFVAAILV-------------TNHNNNQLTLTE--IRDFCEQKSLARYKLPK 507
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREV 447
+W K P T++GK+ R ++R ++
Sbjct: 508 EIYVW-KSLPKTASGKLLRQQIRNQI 532
>gi|451335840|ref|ZP_21906405.1| Acetoacetyl-CoA synthetase [Amycolatopsis azurea DSM 43854]
gi|449421732|gb|EMD27139.1| Acetoacetyl-CoA synthetase [Amycolatopsis azurea DSM 43854]
Length = 552
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 176/390 (45%), Gaps = 47/390 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E D P H G+ +A
Sbjct: 191 IQYTSGTTGFPKGATLSHHNILNNGYFVGELCNYTEADKVCIPVPFYHCFGMVMGNLAAT 250
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GAC V P FE K+ LEAV TSL VP + +A L S++ +
Sbjct: 251 THGACMVIPAPAFEPKATLEAVAAEKCTSLYGVPTMF--IAELADPDFASHDLSSLRTGI 308
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK+ + A++ YGMTETS T T D ++E
Sbjct: 309 MAGSPCPVEVMKQVIDRMGMAEVSICYGMTETSPVST-QTRADDSVER------------ 355
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPS 301
+ VG+ PH+E+KV + G TRG VML YW+Q
Sbjct: 356 -------RVSTVGRVGPHLEVKVVDPETGLTVPRGEPGEFCTRGYSVMLGYWEQADKTAE 408
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ +D G V + GR + GGEN+YP E+E L HP I+ V+
Sbjct: 409 AIDAARWMHTGDLAIMDADGYVNITGRIKDMVIRGGENLYPREIEEFLYTHPDILDAQVI 468
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E ++A VR+RE L++E +R+ C E L +K PR
Sbjct: 469 GVPDDKYGEELMAWVRMREG---------------AAPLTAEAVREFC-EGKLARYKIPR 512
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+V + FP+T TGK+R+ E+R +S L
Sbjct: 513 -YVHVVEEFPMTVTGKVRKVEMRERSISIL 541
>gi|339327543|ref|YP_004687236.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator N-1]
gi|338167700|gb|AEI78755.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator N-1]
Length = 557
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 210/444 (47%), Gaps = 54/444 (12%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 74
L+ +P L+W V +GS ++ + D L A+ + R T + + A+ I FTS
Sbjct: 156 LRAARLPRLQWVVRMGSEATPGMLNYDALLAE---PDTARLDAVTATLSAHDAINIQFTS 212
Query: 75 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGAC 133
GTTG+PKG ++H ++ + G+ DV PL H G+ S +A + VGAC
Sbjct: 213 GTTGNPKGATLTHHNVVNNGRFVAMAMCLGDSDVLCIPVPLYHCFGMVLSVLACVSVGAC 272
Query: 134 HVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
VF + F+ + ++A + T+L VP + +A L + + +++ + G
Sbjct: 273 MVFPGEAFDPLATMQAASEERCTALHGVPTMF--IAQLDHPEFSRFDFSTLRTGIMAGAP 330
Query: 193 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 252
P E+MK +++ AYGMTETS P +F + T + +
Sbjct: 331 CPIEVMKRVVADMHMSEVTIAYGMTETS-------------------PVSFQSATDDPLD 371
Query: 253 QPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYW-DQFLAKPSVSTGE 306
+ + VG+ PH+E KV + G + TRG VM YW D + ++ G
Sbjct: 372 K-RVATVGRVQPHLECKVVDALGEVVPTGATGELCTRGYSVMQGYWEDDERTREAIRDG- 429
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +HP + + V G+ +
Sbjct: 430 -WMHTGDLATIDDKGYCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGVPDQ 488
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E V A + L+ QS+ E +R CR++ + +K PR ++ +
Sbjct: 489 KYGEEVCAWIVLKPG---------QSATEDE-------IRTFCRDQ-IAHYKIPR-YIRF 530
Query: 427 RKPFPLTSTGKIRRDEVRREVMSH 450
P+T TGK+++ V R+ M H
Sbjct: 531 VSEMPMTVTGKVQK-FVMRDTMIH 553
>gi|414153677|ref|ZP_11409999.1| short chain acyl-CoA synthetase, anaerobic [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411454698|emb|CCO07903.1| short chain acyl-CoA synthetase, anaerobic [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 554
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 208/449 (46%), Gaps = 55/449 (12%)
Query: 14 ELQHTAIPSLRWHVSLGSSSS-DFVNKRDMLT-ADILKGYSLRSLPFTHSWAPEGAVIIC 71
+LQ +P L+ + +G + +N +D+LT AD + L + S P+ + +
Sbjct: 139 QLQSARLPLLKNIIFIGDKTPPGMLNWQDLLTLADQVTDEELDAR--QASLDPDDVINMQ 196
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMV 130
+TSGTTG PKGV+++H ++ + + + +G D P H G + M ++
Sbjct: 197 YTSGTTGFPKGVMLTHFNIVNNAHSIANCMAFGPRDRLCIPVPFFHCFGCVLGTMTCVVS 256
Query: 131 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
GA V + F LE +E+ T++ VP + + L + K S++ + G
Sbjct: 257 GATMVPLEVFHPVKVLETIEREKCTAVHGVPTMF--IMELEEMNKRNYDTGSLRTGIMAG 314
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P E+MK N ++ YG TE S ++T + DP
Sbjct: 315 SPCPIEVMKAVVNRMGAREITITYGQTEASPAITMTRIEDPI------------------ 356
Query: 251 VHQPQGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYWDQFLAKPSV 302
+ + VG+ P+VE K+ C G G I+ RG +VM Y+ A
Sbjct: 357 --ELRVTTVGRVIPNVEAKIVDPETGEDCPPGVQ--GEIVARGYNVMKGYYKMPEATAQA 412
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
E WL TGD+G +D+ G + GR I GGEN+YP E+E L HP I + V+G
Sbjct: 413 IDREGWLHTGDLGIMDEKGYFKITGRLKDMIIRGGENIYPREIEEFLYTHPAIKDVQVIG 472
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + + E V+A ++LRE + L+ E ++ +C++K + +K P
Sbjct: 473 VPSLKYGEEVLAYIQLREGYS----------------LTKEEVQAYCKDK-IAKYKIPS- 514
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+VL+ +P T++GKI++ ++R + +S L
Sbjct: 515 YVLFTDSYPTTASGKIQKFKLREQAISTL 543
>gi|326381896|ref|ZP_08203589.1| fatty-acid--CoA ligase [Gordonia neofelifaecis NRRL B-59395]
gi|326199322|gb|EGD56503.1| fatty-acid--CoA ligase [Gordonia neofelifaecis NRRL B-59395]
Length = 509
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 183/385 (47%), Gaps = 45/385 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG+PKGV++SH L+ +L A +G LH AP+ H+ L+S + ++
Sbjct: 163 IFYTGGTTGTPKGVMLSHRNLLTSALGSAAAGIWGVRGRMLHVAPMFHLADLASVVGCML 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
+G HV +P F+ ++ + +H VT + VP +M L VK D + I+ G
Sbjct: 223 LGGSHVMLPTFDPETVCRTIGEHQVTDALLVPTMMQILVDDPHVKDYPT--DCLANIMYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ L+ +FP A L AYGMTE S T + D
Sbjct: 281 ASPISEALLARTRAAFPSAALNQAYGMTELSPVATLLRDEDHD----------------- 323
Query: 250 SVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVST 304
H + G+ APH ++V DG+ VG I+ G HVML YW++ + + +
Sbjct: 324 --HPVRRRSAGQAAPHALVRVVDPDGADLPTGSVGEIVCAGDHVMLGYWNR-PEETAAAL 380
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
+ W+ TGD G +D+ G V++V R I +GGENVY EVE + +HP + V+GI
Sbjct: 381 RDGWMHTGDGGYLDEDGYVYVVDRIKDMIITGGENVYSVEVENAIAKHPAVAQCAVIGIP 440
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ R E V A V L L+ + L H RE ++ G+K PR
Sbjct: 441 DDRWGERVHAVVGLMPGQT----------------LTLDELADHVRE-HIAGYKVPRSMS 483
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMS 449
+ + FP++ GKI + E+R + S
Sbjct: 484 VVEQ-FPMSGAGKILKRELRIQFAS 507
>gi|239820433|ref|YP_002947618.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
gi|239805286|gb|ACS22352.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
Length = 500
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 194/407 (47%), Gaps = 44/407 (10%)
Query: 49 KGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDV 108
+G +L LP + + A I+ +T GTTG KGV++SH+ S+ + A + D V
Sbjct: 132 EGAALEPLPDSRTGGDALAAIL-YTGGTTGRSKGVMLSHANFWTASMTRGAELNNAPDSV 190
Query: 109 YLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLA 168
L APL H+ GL + L+VG V + +F + ++A+E+H + ++ VP++ L
Sbjct: 191 SLLVAPLFHVAGLGRLVGQLIVGGGCVTMAQFRPAAVIDAIEEHRIGDIVVVPSM---LQ 247
Query: 169 TLIRVKKTWKGR-DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT 227
+L+ GR S+ +I G +P +L+ A ++P A+ AYG+TET+ ++
Sbjct: 248 SLLDDAAFTPGRVRSLTRIAFGAAPMPPDLLDRALEAWPHAEFFQAYGLTETAGAVCINL 307
Query: 228 LYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRIL 282
+ E +A G + VG+ E+ + + VG +L
Sbjct: 308 PSNHRAEA-----RALGRLN----------SVGRAGLGAEIIIADESGRELPRGEVGEVL 352
Query: 283 TRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYP 342
RG VM YW A + + + WL TGD G + G++++V R I SGGENVY
Sbjct: 353 ARGPMVMQGYWRNPEAT-AAALRDGWLRTGDAGRMLPDGHLFIVDRLKDMIISGGENVYC 411
Query: 343 EEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSS 402
EVEA L HP + V+G+ +AR E V A V L + +
Sbjct: 412 AEVEAALRSHPQVRQAAVIGVPDARWGEAVHAAVVLADDARADADE-------------- 457
Query: 403 EVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 449
LR CRE+ L G+K PR R+ PL++ GK+ ++ +R + +
Sbjct: 458 --LRAWCRER-LAGYKCPRGISFLRE-LPLSAAGKVLKNVLRERLQA 500
>gi|379708192|ref|YP_005263397.1| putative 4-coumarate--CoA ligase 2 (4CL 2) (4-coumaroyl-CoA
synthase 2) [Nocardia cyriacigeorgica GUH-2]
gi|374845691|emb|CCF62757.1| putative 4-coumarate--CoA ligase 2 (4CL 2) (4-coumaroyl-CoA
synthase 2) [Nocardia cyriacigeorgica GUH-2]
Length = 515
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 182/391 (46%), Gaps = 62/391 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIA---IVGYGEDDVYLHTAPLCHIGGLSSAMA 126
+ +T GTTG PKGV++SH L+ +L ++ ++ G LH AP+ H+ +
Sbjct: 163 VFYTGGTTGHPKGVMLSHDNLVTSALGSLSTGHVLSRGGR--LLHAAPMFHLADFALWTC 220
Query: 127 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 186
+ A HVF+P F LEA+ +H VT + VP ++ L SV+ +
Sbjct: 221 GNLADATHVFVPAFTPAGVLEAIARHRVTDALLVPTMIQMLVD--DPAAASHDLSSVRHL 278
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD---PTLETPGQLPQAF 243
+ G + +++ A +FP A AYGMTE S T ++ D P L
Sbjct: 279 VYGASPISEAVLERAMATFPDAGFTQAYGMTELSPIATLLSPADHLRPELRR-------- 330
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 298
G+ APHVE+++ + + V G ++ RG +VML YW+
Sbjct: 331 --------------SAGRAAPHVEVRIVDETGTEVPRGEVGEVVARGDNVMLGYWN---- 372
Query: 299 KPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
KP + + W+ TGD G +D+ G V++V R I +GGENVY EVE + HP +
Sbjct: 373 KPEATAEAIRDGWMHTGDGGRMDEQGYVFIVDRIKDMIITGGENVYSVEVENAVAAHPSV 432
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
V+G+ + + E V A + L+ + +++ +R+HC+ +
Sbjct: 433 AACAVIGVPDDQWGERVHAVIVLQPGAELDDND----------------VREHCKSL-IA 475
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
+K PR V + P++ GKI + E+R+E
Sbjct: 476 NYKIPR-SVAFVDALPVSGAGKILKRELRKE 505
>gi|271966242|ref|YP_003340438.1| AMP-dependent synthetase and ligase [Streptosporangium roseum DSM
43021]
gi|270509417|gb|ACZ87695.1| AMP-dependent synthetase and ligase [Streptosporangium roseum DSM
43021]
Length = 530
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 182/397 (45%), Gaps = 55/397 (13%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IG 119
S + + A+ I +TSGTTG PKG +SH ++ ++ Y E D P H G
Sbjct: 169 SLSADDAINIQYTSGTTGFPKGATLSHHNILNNGFFVGELIHYDEHDRVCLPVPFYHCFG 228
Query: 120 GLSSAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
+ + GAC V P F+ ++ L AV+Q TSL VP T+ + T
Sbjct: 229 MVMGNLGATSHGACVVIPAPGFDPEATLRAVQQERCTSLYGVP-------TMFIAELTLA 281
Query: 179 GRDSVKKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
G+ + + G G P E+MK A++ YGMTETS T MT D +LE
Sbjct: 282 GQYDLSSLRTGIMAGSPCPVEVMKRVVTEMNMAEVAICYGMTETSPVST-MTRSDDSLER 340
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVM 289
+ VG+ PHVE+K+ + G + TRG VM
Sbjct: 341 RTE-------------------TVGQVMPHVEVKITHPETGLTVPRGEPGELCTRGYSVM 381
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
L YW++ W+ TGD+ ++D G V +VGR + GGENVYP EVE L
Sbjct: 382 LGYWNEPERTAEAIDTARWMHTGDLATMDADGYVNVVGRIKDMVIRGGENVYPREVEEFL 441
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
+HP I + V+G+ + + E ++A V +R+ L++E +R+ C
Sbjct: 442 YRHPDIADVQVIGVPDEKYGEELMAWVVIRQGGT---------------PLTAEAVREFC 486
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
K L +K PR +V FP+T TGKIR+ E+R E
Sbjct: 487 AGK-LAHYKIPR-YVHVVDGFPMTVTGKIRKVEMREE 521
>gi|357040353|ref|ZP_09102141.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355356706|gb|EHG04490.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 516
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 192/384 (50%), Gaps = 43/384 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCHIGGLSSAMAML 128
+ +TSGTTG PKGV+++H +I+ S+ Y E DDV ++ APL H G S +M
Sbjct: 162 LMYTSGTTGYPKGVILTHKNIIMTSMNLSWSYHYIEPDDVTINFAPLFHSGQASISMCHF 221
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
GA ++ + KF +S LE +++ VT+ P ++ L + S+++I
Sbjct: 222 YSGATNIIMEKFNPQSILETIQKEKVTNFWAAPTMINMLIKYPEFARY--DLSSLRQIAY 279
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G +P L+KE + K I YG+TE LT + D E P + + G+V
Sbjct: 280 SGAPMPVPLLKECL-ALIGPKFIQMYGLTEAGPHLTSLAQEDHVAEGPPEKVRRLGSV-- 336
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVS 303
GK + +++V ++ VG I+ +G ++M YW+ L K +
Sbjct: 337 -----------GKEVLNTQVRVVNERGEDVAPGEVGEIIGKGDNIMQGYWN--LPKATAE 383
Query: 304 T-GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ WL TGD+ ++D+ G +++V + I SGGEN+YP+E+E V+ +HP ++ V+G
Sbjct: 384 ALRDGWLYTGDLATVDEDGYIYIVDCKKDMIISGGENIYPKELENVIYEHPAVLEAAVIG 443
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + E+V+A + L++ Q +E E + ++C+ KNL +K P+
Sbjct: 444 LPDTHWGELVMALIVLKQGQQVTE----------------EEIIEYCK-KNLASYKKPKR 486
Query: 423 FVLWRKPFPLTSTGKIRRDEVRRE 446
V + P +GK+ + +R++
Sbjct: 487 -VKFIDELPKNPSGKVLKTVLRQK 509
>gi|440700609|ref|ZP_20882849.1| putative long-chain-fatty-acid--CoA ligase [Streptomyces
turgidiscabies Car8]
gi|440276798|gb|ELP65015.1| putative long-chain-fatty-acid--CoA ligase [Streptomyces
turgidiscabies Car8]
Length = 510
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 186/389 (47%), Gaps = 50/389 (12%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
P+ + +TSGTT PKGV I++ L +++++I G D L PL H+GGL
Sbjct: 159 GPDDLQRLMYTSGTTSRPKGVRITYGNLHAKNVSQIVHFGLTAADTTLVAGPLYHVGGLD 218
Query: 123 -SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
A+ +L G V KF++ L A+E+H VT+ P +M + + ++++
Sbjct: 219 MPALPVLYAGGGVVLQRKFDAPGVLRAIEEHRVTNAWLAP-VMVNAVLEVPDRESYD-TT 276
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ I+ GG P +++ N+FP A AYG+TET S TF+ + L G
Sbjct: 277 SMRFIVGGGEKTPEPVLRRIMNAFPNAWFADAYGLTETVSGDTFLD-REHGLSKLG---- 331
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYW-DQ 295
VG+P PH +++ D + +G I RG V YW D+
Sbjct: 332 ----------------SVGRPVPHTRIRIVDDTGEEAPAGELGEITLRGPKVFAGYWRDE 375
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
++ G W TGDIG +D+ G +++ R+ I SGGEN+ EVE VL +HP +
Sbjct: 376 KATAAALRDG--WFHTGDIGHVDEEGFLYIDDRKKDMIVSGGENIATPEVERVLYEHPAV 433
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ VVG+A+ R E+ A V R +++ D+ LR C+E+ L
Sbjct: 434 LEAAVVGLAHPRWGEVPRAFVVFRPG---TDAGTDE-------------LRGFCQER-LA 476
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
FK P F + + P T +GK+ + +R
Sbjct: 477 KFKVPARFDIVDE-LPRTPSGKVLKRTLR 504
>gi|333913671|ref|YP_004487403.1| o-succinylbenzoate--CoA ligase [Delftia sp. Cs1-4]
gi|333743871|gb|AEF89048.1| o-succinylbenzoate--CoA ligase [Delftia sp. Cs1-4]
Length = 520
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 183/381 (48%), Gaps = 43/381 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG PKGV++SH L + +L+ + V V + P+ H+ G A+ M
Sbjct: 165 VMYTGGTTGRPKGVMLSHDNLFINALSNASNVPRQHVKVGMVVTPMFHVAGCGLALLMAQ 224
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
V +P F+ + L V+QH V L VP ++ L R+ + S++ +L G
Sbjct: 225 RLVPQVIVPAFDELAILAGVQQHGVNELFLVPTMIRRLIEHPRLAEF--DLSSLRLMLYG 282
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ + L++ A + P A AYGMTE S ++ M P PG PQ
Sbjct: 283 AAPIDASLLERAMQALPGADFAQAYGMTELSPTIVSM---GPAEHRPG--PQ-------- 329
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPSVS 303
+ G+P E+++ DG VG I RG VM YW++ A+ + +
Sbjct: 330 --RERLLRAAGRPVTIAEVRIV-DGEGRELPPGEVGEITARGPMVMQGYWNK-PAETAAA 385
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W+ TGD+G +D G +++V R I SGGENVY EVE + Q P + V+G+
Sbjct: 386 LKDGWMHTGDMGRLDADGYLFVVDRLKDMIVSGGENVYSAEVENAIAQLPQVAMCAVIGV 445
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ R E V A + RE +E +EV+ HCRE+ + G+K PR
Sbjct: 446 PDERWGERVHAVIVAREGQPLTE---------------AEVI-AHCRER-IAGYKCPR-S 487
Query: 424 VLWRKPFPLTSTGKIRRDEVR 444
V +R PL++ GK+++ ++R
Sbjct: 488 VEFRAELPLSAAGKLQKFQLR 508
>gi|226187497|dbj|BAH35601.1| putative fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
Length = 510
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 190/397 (47%), Gaps = 48/397 (12%)
Query: 56 LPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDV---YLHT 112
+P TH+ P+ ++ +T GTTG PKGV++S ++ L +A G GE ++ LH
Sbjct: 150 IPDTHA-DPDALALLMYTGGTTGRPKGVMLSAGQILTSVLGVLA--GSGEPNLPGRSLHV 206
Query: 113 APLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR 172
APL H+ + + + G+ HV + F + +E + + VT + VP ++ + L
Sbjct: 207 APLFHLAAFAGLVQASVTGSVHVLMGDFTVEKLVETIAEKEVTQSLLVPTMVQTM--LEY 264
Query: 173 VKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT 232
+T DS+ I G +P L++ P +L YGMTE + + T + D
Sbjct: 265 ADRTGLPIDSLTSITYGASPMPEPLVRRLIERSPDLRLRQGYGMTELAPAATLLRDDDHR 324
Query: 233 LETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAH 287
N H + VG+ APH E+++ + +G ++ RG++
Sbjct: 325 ----------------NPDHPERLRSVGRAAPHTEVRIVDATGTELPRGDIGEVVVRGSN 368
Query: 288 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 347
VM+ YW+ A+ + + W+ TGD+G +D+ G V+LV R I SGGENVY EVEA
Sbjct: 369 VMMGYWNNE-AETAHAVRSGWMHTGDLGFMDEHGYVFLVDRLKDMIISGGENVYSAEVEA 427
Query: 348 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 407
L QHPG+ V+G+ + + E V A V + E+N S + LR
Sbjct: 428 ALSQHPGVSSCAVIGVPDDKWGERVHAVV-----VRTPENNS-----------SGDELRD 471
Query: 408 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
E+ + +KAPR V + PL+ GKI + +R
Sbjct: 472 FVGER-IARYKAPR-SVDFVDALPLSPVGKILKRTLR 506
>gi|239918243|ref|YP_002957801.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Micrococcus
luteus NCTC 2665]
gi|281415565|ref|ZP_06247307.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Micrococcus
luteus NCTC 2665]
gi|239839450|gb|ACS31247.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Micrococcus
luteus NCTC 2665]
Length = 592
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 182/391 (46%), Gaps = 47/391 (12%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P V + +TSGTTG PKGV ++H ++ ++GY E+D + P H G+
Sbjct: 218 PADPVNLQYTSGTTGFPKGVTLTHRNVLNNGFHIGELLGYTEEDTVVIPVPFFHCFGMVI 277
Query: 124 AMAMLMVGACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+ + IP FE SAL AV TSL VP + +A L R +
Sbjct: 278 GVIATVSHGSLAVIPARSFEPVSALRAVAATGATSLYGVPVMF--IAMLARPEADALDLS 335
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
+++ + G P E+MK+ + F +++ YGMTET+ ++ MT D +LE Q
Sbjct: 336 TLRTGVMAGSTCPVEVMKKVIDRFHMSEVAICYGMTETAP-VSTMTRRDDSLEVRTQ--- 391
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 295
VG+ PHVE K+ + V G + TRG VML YWD
Sbjct: 392 ----------------TVGRTMPHVETKIVDPATGDVVPRGATGELCTRGYSVMLGYWDA 435
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
V + W+ +GD+ S+D+ G+V + GR + GGEN+ P EVE L HP I
Sbjct: 436 PEKTAEVLDADGWMHSGDLASMDEDGSVRIEGRIKDLVIRGGENISPREVEEFLYTHPDI 495
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ VVG+ + + E ++ACV +++ + L+ + +R+ + +
Sbjct: 496 QDVQVVGVPDEKYGEQLMACVIMKDGIE---------------PLTVDAVREFAAGR-IA 539
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
FK P V FP+T +GK+R+ E+R E
Sbjct: 540 HFKIP-AHVRVLDAFPMTVSGKVRKVELREE 569
>gi|363422556|ref|ZP_09310631.1| AMP-binding domain protein [Rhodococcus pyridinivorans AK37]
gi|359732854|gb|EHK81861.1| AMP-binding domain protein [Rhodococcus pyridinivorans AK37]
Length = 555
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 187/401 (46%), Gaps = 47/401 (11%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
S +P+ + I +TSGTTG PKG +SH ++ + Y E D PL H G
Sbjct: 187 SLSPDDPINIQYTSGTTGFPKGATLSHHNVLNNGFFVGELCHYTERDRVCIPVPLYHCFG 246
Query: 121 LSSA-MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
++ +A GA V P F+ + L AV + TSL VP + +A L
Sbjct: 247 MTMGNLACTSHGATIVLPAPGFDPAATLGAVAEEKCTSLYGVPTMF--IAELADPGFDNY 304
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
S++ + G P E+MK+ + +++ YGMTETS ++ T D ++E
Sbjct: 305 DLSSLRTGIMAGSPCPVEVMKQVIDRMGMSEVSICYGMTETSP-VSTQTRSDDSIER--- 360
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRY 292
+ VG+ PH+E+KV + G + TRG VML Y
Sbjct: 361 ----------------RVSTVGRVGPHLEVKVVDPVTGLTVPRGEPGELCTRGYSVMLGY 404
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
WDQ W+ TGDIG +D+ G V + GR + GGEN+YP E+E L H
Sbjct: 405 WDQPDKTAEAIDAARWMHTGDIGVMDEDGYVSVTGRIKDMVIRGGENIYPREIEEFLYTH 464
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P I+ VVG+ + + E ++A +R+RE + L ++ LR C K
Sbjct: 465 PDILDAQVVGVPDTKYGEELMAWIRMREGAE---------------PLDADSLRTFCTGK 509
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
L +K PR +V + FP+T TGK+R+ E+R + ++ L++
Sbjct: 510 -LAHYKIPR-YVHVVEEFPMTVTGKVRKVEMREQAIALLEA 548
>gi|419961160|ref|ZP_14477169.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
gi|414573481|gb|EKT84165.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
Length = 530
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 208/439 (47%), Gaps = 66/439 (15%)
Query: 20 IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 79
+P L V++G+ S V + L ++ Y+ LP + +I +TSGTTG+
Sbjct: 135 VPELSLVVNIGADSEAGVLGYEELVSEAGPAYAPVDLP------EDTPSLILYTSGTTGT 188
Query: 80 PKGVVISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 138
PKG V+SHS ++ QS+ I + Y DD+ +P+ H+ L S MLM+G V P
Sbjct: 189 PKGAVLSHSNMVGQSITCIRAMRYDRGDDIGFLASPVFHVAALGSVAPMLMLGGTTVIHP 248
Query: 139 --KFESKSALEAVEQHCVTSLITVP----AIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
F L+ EQ +T++ VP A+ AD T +GRD ++++ G
Sbjct: 249 LKAFNPAEMLDVWEQERITTVFLVPVQWQAVCAD--------PTVRGRDLALRVISWGAA 300
Query: 193 LPSE-LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
S+ +++ ++FP+A +++ +G TE S +T + D + G
Sbjct: 301 PASDTVLRAMADTFPRALIVAVFGQTEMSP-ITCVLDGDDAIRKLG-------------- 345
Query: 252 HQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGE 306
VGKP P ++ +V D + V G I+ RG +ML YW Q A + + G
Sbjct: 346 ------SVGKPIPTIQTRVVDDDMNDVAPGTVGEIVYRGPTMMLEYW-QNPAATADAFGG 398
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
W +GD+ DD G V++V R+ I SGGEN+Y EVE VL HP I VVG +
Sbjct: 399 GWFHSGDLVRQDDEGFVYVVDRKKDMIISGGENIYCAEVENVLFGHPRIREAAVVGRPDP 458
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ TE+ VA V L D+ S L+ E L +K L +K P+ V+
Sbjct: 459 KWTEVPVAVVALD----------DEGSD-----LTVEELAAWLDDK-LARYKHPKDVVI- 501
Query: 427 RKPFPLTSTGKIRRDEVRR 445
P ++GK+ + E+R+
Sbjct: 502 VDALPRNASGKVVKGELRK 520
>gi|411007068|ref|ZP_11383397.1| AMP-binding domain protein [Streptomyces globisporus C-1027]
Length = 535
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 175/385 (45%), Gaps = 51/385 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E D P H G+ +A
Sbjct: 187 IQYTSGTTGFPKGATLSHHNILNNGYFVGETIAYTEADRVCLPVPFYHCFGMVMGNLACT 246
Query: 129 MVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GAC V P FE + L AV+Q TSL VP + +A L S++ +
Sbjct: 247 SHGACIVIPGPSFEPATVLAAVQQERCTSLYGVPTMF--IAELNLPDFAAYDLSSLRTGI 304
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P+E+MK A++ YGMTETS ++ T D LE
Sbjct: 305 MAGSPCPAEVMKRVVAEMHMAEVSICYGMTETSP-VSTQTRRDDDLER------------ 351
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCS--------DGSSHVGRILTRGAHVMLRYWDQFLAK 299
+ VG+ PH+E+KV GSS G + TRG VML YWDQ
Sbjct: 352 -------RTGTVGRVLPHIEVKVVDPVTGVTLPRGSS--GELRTRGYSVMLGYWDQPDRT 402
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
V W+ TGD+ + + G V +VGR I GGENVYP E+E L HP I +
Sbjct: 403 AEVIDAGRWMHTGDLAVMGEDGYVQVVGRIKDMIIRGGENVYPREIEEFLHGHPKIADVQ 462
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VVG+ + R E ++ACV R+ + E L +HCRE+ L +K
Sbjct: 463 VVGVPDERYGEEILACVIPRDPADPP---------------TLEELTEHCRER-LAHYKI 506
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVR 444
PR + + FP+T +GK+R+ E+R
Sbjct: 507 PRRLRIL-ETFPMTVSGKVRKIELR 530
>gi|359786297|ref|ZP_09289433.1| acyl-CoA synthetase [Halomonas sp. GFAJ-1]
gi|359296411|gb|EHK60663.1| acyl-CoA synthetase [Halomonas sp. GFAJ-1]
Length = 567
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 198/447 (44%), Gaps = 61/447 (13%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEG 66
+LQ +P L ++L S +DF+N+ A + + L T + +
Sbjct: 155 QLQSKTLPELECVINLSSEKHSGMWRWADFINE-----ASKVSQTDVNDLQATLQF--DD 207
Query: 67 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA 126
+ I +TSGTTG PKG +SH ++ +G+ +D + PL H G+
Sbjct: 208 PINIQYTSGTTGFPKGATLSHHNILNNGFFVAESMGFTSEDRLVIPVPLYHCFGMVMGNL 267
Query: 127 MLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
M + P F+ L+AV + T+L VP + +A L S++
Sbjct: 268 GCMTHGAAMIYPDEGFDPGKVLKAVHEQKATALYGVPTMF--IAELEHPDFASTDFSSLR 325
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P+E+MK+ + + AYGMTETS T
Sbjct: 326 TGIMAGSICPAEIMKQVIDKMNMKGVQIAYGMTETSPVST-------------------- 365
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLA 298
N + VG+ PH+E K+ G+ +G + TRG VML+YW A
Sbjct: 366 QTGANDSIDKRVSTVGRTQPHLESKIVDPGNGGILPRGEIGELCTRGYSVMLKYWKNEKA 425
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
W+ TGD+ ++D+ G + +VGR + GGENVYP+E+E L HP I +
Sbjct: 426 TAEAIDEAGWMHTGDLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAISEV 485
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V G+ + + E ++A V+L + S+ D ++ E LR +C+ K +T FK
Sbjct: 486 QVTGVPDKKYGEELIAWVKL------NSSSGD---------VTGEELRNYCKGK-ITHFK 529
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRR 445
PR F + FP+T TGKI++ ++R
Sbjct: 530 IPRYFKFVDE-FPMTVTGKIQKFKMRE 555
>gi|149377184|ref|ZP_01894932.1| acyl-CoA synthase [Marinobacter algicola DG893]
gi|149358483|gb|EDM46957.1| acyl-CoA synthase [Marinobacter algicola DG893]
Length = 562
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 181/384 (47%), Gaps = 47/384 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I FTSGTTG+PKG ++H ++ E D + PL H G + + +
Sbjct: 208 IQFTSGTTGNPKGATLTHHNILNNGYFVAESQLLTEKDRLVIPVPLYHCFGMVMGNLGCI 267
Query: 129 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ + FE KS L+AV Q T+L VP + +A L + +++ +
Sbjct: 268 THGSTMIYPGEGFEPKSVLQAVHQEKATALYGVPTMF--IAELAEPEFETYDLSTLRTGI 325
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P+E+MK+ ++ AYGMTETS T + DP
Sbjct: 326 MAGSICPAEVMKKVNGKMNMKEVQIAYGMTETSPVSTQTSSLDP---------------- 369
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ Q VG+ PH+E K+ G+ +V G + TRG VML+YW+
Sbjct: 370 ----FEKQVTTVGRTQPHLETKIVDPGNGNVVPRGEIGELCTRGYSVMLKYWNNEEKTSE 425
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
G W+ TGD+ ++D+ G + +VGR + GGEN+YP+E+E L HP I + V
Sbjct: 426 AIDGAGWMHTGDLATMDEDGYIQIVGRIKDMVIRGGENIYPKEIEEFLYTHPAIEEVQVT 485
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI + + E ++A V+L N D ++ + LR+ C+ K + FK PR
Sbjct: 486 GIPDDKYGEELIAWVKL---------NPDADP------VTGDELREFCKGK-IAHFKIPR 529
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRR 445
+ + FP+T TGKI++ ++R
Sbjct: 530 NYKFVDE-FPMTVTGKIQKFKMRE 552
>gi|303273146|ref|XP_003055934.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462018|gb|EEH59310.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 356
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 180/382 (47%), Gaps = 41/382 (10%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVG 131
FTSGT+G PKGV+++ + ++ I + DV+LH AP+ H+ + A+ VG
Sbjct: 7 FTSGTSGKPKGVMLTQEIVSRHAVGAITEMRLCHQDVWLHAAPMFHLVDAFAIYAVTAVG 66
Query: 132 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNG 189
A HV P FE+ + L +E CVT V + + + +L+ + + + D S++ + G
Sbjct: 67 ASHVIQPTFEAFATLRVIETECVT----VMNVASTMISLLVINPSLRDVDVSSLRLVSCG 122
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G L +K+A ++F + +YGMTE + M+L + L F V +
Sbjct: 123 GSPLAEVYIKQAISAF-GCEFFMSYGMTECCGKIA-MSLLSRSQRANCSLETQFRTVCTS 180
Query: 250 SVHQPQGVCVGKPAPHVELKVC-------SDGSSHVGRILTRGAHVMLRYWDQFLAKPSV 302
G+P EL+V + G VG I RG V YW + K V
Sbjct: 181 ----------GRPFAPQELRVVDKNGENVTKGDGEVGEIYVRGLTVFDGYWHELDVKKVV 230
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W TGD+ +ID G + +V R+ + GGENVY EVEAVL HP + V G
Sbjct: 231 IDENGWFRTGDLATIDMFGYIQIVDRKTDMVLVGGENVYTAEVEAVLCAHPAVNQAAVFG 290
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ N L ++V A V L+ + + L+ VL +H RE L+ FK P +
Sbjct: 291 VDNELLGQIVHAVVVLKADF--------------DKLIDETVLLKHAREY-LSAFKVPAV 335
Query: 423 FVLWRKPFPLTSTGKIRRDEVR 444
+ + FP + TGK+ ++ +R
Sbjct: 336 LNIV-EAFPTSGTGKVLKNVLR 356
>gi|432336166|ref|ZP_19587696.1| long-chain-fatty-acid--CoA ligase [Rhodococcus wratislaviensis IFP
2016]
gi|430776934|gb|ELB92327.1| long-chain-fatty-acid--CoA ligase [Rhodococcus wratislaviensis IFP
2016]
Length = 530
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 132/439 (30%), Positives = 205/439 (46%), Gaps = 66/439 (15%)
Query: 20 IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 79
+P L V++G+ S V + L ++ Y+ LP + +I +TSGTTG+
Sbjct: 135 VPELSLVVNIGADSEAGVLGYEELVSEAGPAYAPVDLP------EDTPSLILYTSGTTGT 188
Query: 80 PKGVVISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 138
PKG V+SHS ++ QS+ I + Y DD+ +P+ H+ L S MLM+G V P
Sbjct: 189 PKGAVLSHSNMVGQSITCIRAMRYDRGDDIGFLASPVFHVAALGSVAPMLMLGGTTVIHP 248
Query: 139 --KFESKSALEAVEQHCVTSLITVP----AIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
F L+ EQ +T++ VP A+ AD T +GRD ++++ G
Sbjct: 249 LKAFNPTEMLDVWEQERITTVFLVPVQWQAVCAD--------PTVRGRDLALRVISWGAA 300
Query: 193 LPSE-LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
S+ +++ ++FP+A +++ +G TE S +T + D + G
Sbjct: 301 PASDTVLRAMADTFPRALIVAVFGQTEMSP-ITCVLDGDDAIRKLGS------------- 346
Query: 252 HQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGE 306
VGKP P ++ +V D + V G I+ RG +ML YW A G
Sbjct: 347 -------VGKPIPTIQTRVVDDDMNDVAPGTVGEIVYRGPTMMLEYWQNPAATADAFAGG 399
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
W +GD+ DD G V++V R+ I SGGEN+Y EVE VL HP I VVG +
Sbjct: 400 -WFHSGDLVRQDDEGFVYVVDRKKDMIISGGENIYCAEVENVLFGHPRIREAAVVGRPDP 458
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ TE+ VA V L D+ S L+ E L +K L +K P+ V+
Sbjct: 459 KWTEVPVAVVALD----------DEGSD-----LTVEELAAWLDDK-LARYKHPKDVVI- 501
Query: 427 RKPFPLTSTGKIRRDEVRR 445
P ++GK+ + E+R+
Sbjct: 502 VDALPRNASGKVVKGELRK 520
>gi|456014381|gb|EMF47996.1| Long-chain-fatty-acid--CoA ligase [Planococcus halocryophilus Or1]
Length = 563
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 197/406 (48%), Gaps = 62/406 (15%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSL---AKIAIVGYGEDDVYLHTAPLCHIGGL 121
E ++ +T GTTGSPKGV+++H LI + + + GE+ + + PL H+ GL
Sbjct: 206 EDLALLQYTGGTTGSPKGVMLTHKNLISNATMCDSWLYKCKKGEETI-MGIIPLFHVYGL 264
Query: 122 SSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
++ + + +M+G V +PKF+ ++AL+ + + T P + L + + K
Sbjct: 265 TTVLILSVMLGNKMVLLPKFDPETALKTINKQKPTLFPGAPTLYIGLMSHPDIAKY--DL 322
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
S++ ++G LP+E+ +E + KL+ YG+TETS +T L
Sbjct: 323 SSIEACMSGSAPLPAEV-QEKFEALTGGKLVEGYGLTETSP-VTHSNL------------ 368
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWD 294
+G SV G P P + K+ G++ +G I +G VM YW+
Sbjct: 369 -VWGERIKGSV--------GIPYPDTDCKIFQTGTTIPIPNGEIGEIAIQGPQVMKGYWN 419
Query: 295 QFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
KP + + WL TGD+G +DD G+ ++V R+ I +GG N+YP E+E VL +
Sbjct: 420 ----KPEETAATIVDGWLLTGDLGYMDDEGHFFIVDRKKDMIIAGGFNIYPREIEEVLYE 475
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
H + VV GI + E V A + L+E + +E E L +CRE
Sbjct: 476 HEAVQECVVAGIPDPYRGETVKAYIVLKEGYTVTE----------------EELNAYCRE 519
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKI-RRDEVRREVMSHLKSLPS 456
+ L FK PR++ +RK P T+ GKI RR V EV +++PS
Sbjct: 520 Q-LASFKVPRVYE-FRKELPKTAIGKILRRSLVDEEVAKQNEAVPS 563
>gi|239991727|ref|ZP_04712391.1| acyl-CoA synthetase [Streptomyces roseosporus NRRL 11379]
gi|291448729|ref|ZP_06588119.1| acyl-CoA synthetase [Streptomyces roseosporus NRRL 15998]
gi|291351676|gb|EFE78580.1| acyl-CoA synthetase [Streptomyces roseosporus NRRL 15998]
Length = 547
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 172/387 (44%), Gaps = 51/387 (13%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MA 126
V I +TSGTTG PKG +SH ++ + Y E D P H G+ +A
Sbjct: 185 VNIQYTSGTTGFPKGATLSHHNILNNGYFVGETIAYTEADRVCLPVPFYHCFGMVMGNLA 244
Query: 127 MLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
GAC V P FE + L AV+Q TSL VP + +A L S++
Sbjct: 245 ATSHGACIVIPGPSFEPATVLAAVQQERCTSLYGVPTMF--IAELNLPDFAAYDLSSLRT 302
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P+E+MK A++ YGMTETS T D G
Sbjct: 303 GIMAGSPCPAEVMKRVVAEMHMAEVSICYGMTETSPVSTQTRRDDDLARRTGT------- 355
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCS--------DGSSHVGRILTRGAHVMLRYWDQFL 297
VG+ PH+E+KV GSS G + TRG VML YWDQ
Sbjct: 356 -------------VGRVLPHIEVKVVDPVTGVTLPRGSS--GELRTRGYSVMLGYWDQPD 400
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
V W+ TGD+ + + G V +VGR I GGENVYP E+E L HP I
Sbjct: 401 RTAEVIDAGRWMHTGDLAVMGEDGYVQVVGRIKDMIIRGGENVYPREIEEFLHGHPKIAD 460
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG+ + R E ++ACV R+ + E L +HCRE+ L +
Sbjct: 461 VQVVGVPDERYGEEILACVIPRDPADPP---------------TLEELTEHCRER-LAHY 504
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVR 444
K PR + + FP+T +GK+R+ E+R
Sbjct: 505 KIPRRLRIL-ETFPMTVSGKVRKIELR 530
>gi|300692553|ref|YP_003753548.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum PSI07]
gi|299079613|emb|CBJ52291.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum PSI07]
gi|344168821|emb|CCA81133.1| long-chain-fatty-acid-CoA ligase [blood disease bacterium R229]
Length = 571
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 218/452 (48%), Gaps = 62/452 (13%)
Query: 15 LQHTAIPSLRWHVSLGSSSS-DFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICF 72
LQ +P+LRW + +G ++ +N +++ +G S +L T + +P+ A+ I F
Sbjct: 161 LQAAKLPALRWVIRMGEGATPGTINFGEVMARG--QGVSTGTLDAITATLSPDDAINIQF 218
Query: 73 TSGTTGSPKGVVISHSALIVQS-LAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMV 130
TSGTTG+PKG ++H ++ + +A+ G D + + PL H G+ S +A
Sbjct: 219 TSGTTGAPKGATLTHVNIVNNARFVAMAMNLQGTDRLCI-PVPLYHCFGMVMSVLACTAT 277
Query: 131 GACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GAC VF + F+ + L V + T+L VP + + ++ GR V + G
Sbjct: 278 GACMVFPGEAFDPLATLRTVAEERCTALHGVPTMF-----IAQLDHPEFGRFDVSSLRGG 332
Query: 190 ---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
G P E+MK ++ AYGMTETS P +F +
Sbjct: 333 IMAGSPCPIEVMKRVVAEMSLREITIAYGMTETS-------------------PVSFQSA 373
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 300
+ + + + VG+ PH+++K+ DG+ V G + T+G VML YWD AK
Sbjct: 374 VTDPLDK-RVTTVGRIQPHLQVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD-EAKT 430
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+ S + W+ TGD+ + D G +VGR + GGENVYP E+E L +HP + + V
Sbjct: 431 AESIRDGWMRTGDLATFDVDGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNV 490
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
G+ + + E V A + L+ Q +E E +R+ C+++ + +K P
Sbjct: 491 FGVPDPKYGEEVCAWIVLKPGQQATE----------------EEIREFCKDQ-IAHYKIP 533
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
R ++ + P+T TGK+++ +R ++ LK
Sbjct: 534 R-YIRFVTEMPMTVTGKVQKFVMRERMIEALK 564
>gi|375097374|ref|ZP_09743639.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
gi|374658107|gb|EHR52940.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
Length = 550
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 176/386 (45%), Gaps = 49/386 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + GY E D P H G+ +A
Sbjct: 191 IQYTSGTTGFPKGATLSHHNILNNGFFVGELCGYTEADRICIPVPFYHCFGMVMGNLAAT 250
Query: 129 MVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 186
GAC V IP FE + L AV+ TSL VP + +A L S++
Sbjct: 251 SHGACMV-IPAQAFEPAATLRAVQAQRCTSLYGVPTMF--IAELAEADFDSYDLSSLRTG 307
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
+ G P E+MK+ A++ YGMTETS T T D ++E
Sbjct: 308 IMAGSPCPVEVMKQVIERMGMAEVTICYGMTETSPVST-QTRADDSIER----------- 355
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 300
+ VG+ PH+E+K+ + G TRG VML YW+Q
Sbjct: 356 --------RVSTVGRVHPHLEVKIVDPETGLTVPRGTPGEFCTRGYSVMLGYWEQPEQTA 407
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
W+ TGD+ +DD G V + GR + GGEN+YP E+E L HP ++ V
Sbjct: 408 DAIDAARWMHTGDLAVMDDEGYVNITGRIKDMVIRGGENIYPREIEEFLYTHPDVLDAQV 467
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ + R E ++A VR+RE L++E LR+ C+ + L +K P
Sbjct: 468 IGVPDRRYGEELMAWVRMREGAP---------------PLTAEALREFCQGR-LAHYKIP 511
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRRE 446
R +V + FP+T TGK+R+ E+R +
Sbjct: 512 R-YVHVVEEFPMTVTGKVRKVEMREK 536
>gi|289706149|ref|ZP_06502518.1| AMP-binding domain protein [Micrococcus luteus SK58]
gi|289557128|gb|EFD50450.1| AMP-binding domain protein [Micrococcus luteus SK58]
Length = 611
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 183/391 (46%), Gaps = 47/391 (12%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P V + +TSGTTG PKGV ++H ++ ++GY E+D + P H G+
Sbjct: 235 PADPVNLQYTSGTTGFPKGVTLTHRNVLNNGFHIGELLGYTEEDTVVIPVPFFHCFGMVI 294
Query: 124 AMAMLMVGACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+ + IP FE SAL AV TSL VPA+ +A L R +
Sbjct: 295 GVIATVSHGSLAVIPARSFEPVSALRAVAATGATSLYGVPAMF--IAMLARPEADALDLS 352
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
+++ + G P E+MK+ + F +++ YGMTET+ ++ MT D +LE Q
Sbjct: 353 TLRTGVMAGSTCPVEVMKKVIDRFHMSEVAICYGMTETAP-VSTMTRRDDSLEVRTQ--- 408
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 295
VG+ PHVE K+ + + G + TRG VML YWD
Sbjct: 409 ----------------TVGRTMPHVETKIVEPVTGDIVPRGATGELCTRGYSVMLGYWDA 452
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
V + W+ +GD+ S+D+ G+V + GR + GGEN+ P EVE L HP I
Sbjct: 453 PEKTAEVLDADGWMHSGDLASMDEDGSVRIEGRIKDLVIRGGENISPREVEEFLYTHPDI 512
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ VVG+ + + E ++ACV +++ + L+ + +R+ + +
Sbjct: 513 QDVQVVGVPDEKYGEQLMACVIMKDGVE---------------PLTVDAVREFAAGR-IA 556
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
FK P V FP+T +GK+R+ E+R E
Sbjct: 557 HFKIP-AHVRVLDAFPMTVSGKVRKVELREE 586
>gi|84502505|ref|ZP_01000641.1| AMP-binding enzyme family protein [Oceanicola batsensis HTCC2597]
gi|84389317|gb|EAQ02114.1| AMP-binding enzyme family protein [Oceanicola batsensis HTCC2597]
Length = 517
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 184/407 (45%), Gaps = 65/407 (15%)
Query: 57 PFTHSWAP-EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGED--------D 107
P ++ P + +IC+T GTTG KGV++SH AL +L G+G D
Sbjct: 150 PAEPAYGPVQSLAMICYTGGTTGQSKGVMLSHLALWSSAL------GFGADVRDLVHESS 203
Query: 108 VYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL 167
L PL H+GGL S AM + C VF+ F+ ++ +E VT LI VP ++
Sbjct: 204 TSLLVMPLFHVGGLLSLFAMTLGAGCCVFMRAFDPLEVMQTIESRGVTHLILVPTMI--- 260
Query: 168 ATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTF 225
+I +K + D S+K + G + + E P L +YG TE S ++
Sbjct: 261 -RMIIDRKDLEDYDLSSIKVLSYGASPMTEGQIAETLEKLPGVNLQQSYGQTELSPYISK 319
Query: 226 MTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGR 280
+ + + G+ + VG E+ + D VG
Sbjct: 320 LAMEQHVSDANGE---------------ARLTSVGHAGIMAEVIIADDDLREMPRREVGE 364
Query: 281 ILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGG 337
IL RG H M YW KP + + W+ TGD+G +D+ G +++V R+ I +GG
Sbjct: 365 ILVRGPHTMTGYW----RKPDETAATLVNGWVRTGDVGWMDEEGFIYIVDRKKDMIVTGG 420
Query: 338 ENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKE 397
ENVY EVE L HP + VV+GI + R E V A + R+ ++++ KE
Sbjct: 421 ENVYSSEVENALSAHPAVAIAVVIGIPDDRWGEAVHAIIVCRD---------ERTATEKE 471
Query: 398 LLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
L+ +HCR + + G+K PR PL++ GKI + ++R
Sbjct: 472 LI-------EHCRSR-IAGYKCPRSVEFRSDALPLSAAGKILKRDLR 510
>gi|352100941|ref|ZP_08958452.1| AMP-binding domain protein [Halomonas sp. HAL1]
gi|350600862|gb|EHA16919.1| AMP-binding domain protein [Halomonas sp. HAL1]
Length = 573
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 202/450 (44%), Gaps = 67/450 (14%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-------SDFVNKRDMLT---ADILKGYSLRSLPFTHSWA 63
EL+ +P L ++L S SD +N+ ++ D L+ +L F
Sbjct: 155 ELKSQKLPDLECIINLSSEKLSGMWRWSDLMNEASKVSQTDVDDLQA----TLQF----- 205
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
+ A+ I +TSGTTG PKG +SH ++ +G+ +D + PL H G+
Sbjct: 206 -DDAINIQYTSGTTGFPKGATLSHHNILNNGFFVAESMGFTSEDRLVIPVPLYHCFGMVM 264
Query: 124 AMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
M + P F+ L+AV + T+L VP + +A L
Sbjct: 265 GNLGCMTHGATMIYPDEGFDPGKVLKAVHEQKATALYGVPTMF--IAELDHPDFPGTDLS 322
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P+E+MK+ + + AYGMTETS T
Sbjct: 323 SLRTGIMAGSICPAEIMKQVISKMNMKGVQIAYGMTETSPVST----------------- 365
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQ 295
N + + VG+ PH+E K+ G+ +G + TRG VML+YW+
Sbjct: 366 ---QTGANDSIEKRVSTVGRTQPHLENKIVDPGNGGILPRGEIGELCTRGYSVMLKYWNN 422
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
A W+ TGD+ ++D+ G + +VGR + GGENVYP+E+E L HP I
Sbjct: 423 DKATAEAIDEAGWMHTGDLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAI 482
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ V G+ + + E ++A V+L + SE ++ E LR++C+ K +T
Sbjct: 483 SEVQVTGVPDKKYGEELIAWVKLNST--ASE-------------VTGEELREYCKGK-IT 526
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
FK PR F + FP+T TGKI++ ++R
Sbjct: 527 HFKIPRYFKFVDE-FPMTVTGKIQKFKMRE 555
>gi|433608182|ref|YP_007040551.1| putative acyl-CoA synthetase [Saccharothrix espanaensis DSM 44229]
gi|407886035|emb|CCH33678.1| putative acyl-CoA synthetase [Saccharothrix espanaensis DSM 44229]
Length = 554
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 182/395 (46%), Gaps = 53/395 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ ++GY DD PL H GL +A
Sbjct: 193 IQYTSGTTGFPKGATLSHHNILNNGYFVGELLGYTVDDRICLPVPLYHCFGLVMGNLAAT 252
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVK 184
GAC V P F+ + L+AV TSL VP + +A+LA ++ D S++
Sbjct: 253 THGACVVLPAPAFDPAATLKAVADERCTSLYGVPTMFIAELA-----DPSFDSHDLSSLR 307
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E+MK+ ++ YGMTETS ++ T D L+
Sbjct: 308 TGIMAGSPCPVEVMKQVVERMGMREVSICYGMTETSP-VSTQTRRDDALDR--------- 357
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 298
+ VG+ PH+E+KV G + TRG VML YW+Q
Sbjct: 358 ----------RVATVGRVGPHLEVKVVDPEHGRTVPRGTPGELCTRGYSVMLGYWEQPDK 407
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
W+ TGD+ +DD G V + GR + GGENVYP E+E L HP ++
Sbjct: 408 TAEAIDPARWMHTGDLAVMDDDGYVSITGRIKDMVIRGGENVYPREIEEFLHTHPDVLDA 467
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+G+ +A+ E ++A +RLR L++E +R+ C L +K
Sbjct: 468 QVIGVPDAKYGEELMAWLRLRPG---------------AAPLTAEAVREFC-AGELAHYK 511
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
PR +V FP+T TGK+R+ E+RR+ + L S
Sbjct: 512 IPR-YVHVVAEFPMTVTGKVRKVEMRRQAAAILGS 545
>gi|162451287|ref|YP_001613654.1| o-succinylbenzoate-CoA ligase [Sorangium cellulosum So ce56]
gi|161161869|emb|CAN93174.1| o-succinylbenzoate-CoA ligase [Sorangium cellulosum So ce56]
Length = 519
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 170/379 (44%), Gaps = 42/379 (11%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM 125
G + I +TSGTTG PKG V+S A + + A +G +DD +L PLCH+GGLS
Sbjct: 162 GDLAIVYTSGTTGRPKGAVLSRRAFLAAAEGSAANLGVRDDDRWLLCLPLCHVGGLSIVT 221
Query: 126 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
L+ + P+FE S L ++ + T L VP ++ LA L + R ++
Sbjct: 222 RCLLARRAVILAPRFEPASVLASIVRDRATLLSVVPTML--LALLEADRDNVLAR--LRA 277
Query: 186 ILNGGGGLPSELMKE-ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+L GG G P+ + E A P ++ YG+TE S +T DP PG
Sbjct: 278 VLVGGAGAPARALDECARRGVPA---LTTYGLTEACSQVTAQRPRDPRATEPGS------ 328
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
G P VEL++ GS VGRI RG + Y+ P +S
Sbjct: 329 ---------------GSPIAGVELRIEGAGSDGVGRIEIRGPVLFRGYYRGPDRAPELSV 373
Query: 305 -GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
G W TGD+G++D G + + RR+ I +GGENVYP EVE VL G+ G VV G+
Sbjct: 374 DGAGWFGTGDLGALDAAGRLHVAARRSDLIVTGGENVYPAEVEQVLASCEGVAGAVVFGV 433
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSK--NKELLLSSEVLRQHCREKNLTGFKAPR 421
+ R ++V A + ++ S + + L H R + L A
Sbjct: 434 PDDRWGQVVAAAIVPEQASPCEAGGAAPSPAWLGDLAAVVAARLAPHKRPRRLCAVAA-- 491
Query: 422 LFVLWRKPFPLTSTGKIRR 440
PLT+ GK+ R
Sbjct: 492 --------LPLTAAGKLDR 502
>gi|383818352|ref|ZP_09973644.1| AMP-dependent synthetase and ligase [Mycobacterium phlei
RIVM601174]
gi|383339072|gb|EID17424.1| AMP-dependent synthetase and ligase [Mycobacterium phlei
RIVM601174]
Length = 497
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 190/394 (48%), Gaps = 43/394 (10%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
E I+ FTSGTT +PK V +SH+ L + D L P HI G+++A
Sbjct: 137 EDTAIVLFTSGTTSAPKAVELSHANLTSYITGTVEFCSAEPQDAALICVPPYHIAGVNAA 196
Query: 125 MAMLMVGACHVFIPKFESKS--ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
++ L G V++ +F++ + L AVE+ VT+ VP ++ + ++ + T G +
Sbjct: 197 LSNLYAGRRMVYLREFDADAWVRLAAVER--VTTATVVPTMLDRIVGVLEDRPT--GLPA 252
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + GG +P L++ A P ++AYG+TETSS++ +T P A
Sbjct: 253 LRNLAYGGAKVPLPLVRRALRLLPDVGFVNAYGLTETSSTVAVLT--------PEDHRTA 304
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFL 297
P +V + G VG+ P VEL++ G G + RGA V RY
Sbjct: 305 LAATDP-AVARRLG-SVGRAVPGVELQIRGQDGRVLGPGETGELYVRGAQVSGRY----T 358
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
SV + W T D+ S+D+GG +++ GR + I GGEN+ P E+E VL++HPG+
Sbjct: 359 GLGSVLDDDGWFPTRDVASMDEGGYLYIAGRSDDTIIRGGENIAPAEIEDVLVEHPGVRE 418
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG+ + + + +VA V Q + + E LR R + L G
Sbjct: 419 VAVVGVDDDQWGQAIVAVV------------VPQPGTSPQ----PEELRNFVR-RTLRGS 461
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ P V +R P+T TGK+ R E+R +V L
Sbjct: 462 RTPDRIV-FRDALPVTPTGKVLRREIRLDVAGEL 494
>gi|321466592|gb|EFX77587.1| hypothetical protein DAPPUDRAFT_54086 [Daphnia pulex]
Length = 577
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 179/391 (45%), Gaps = 48/391 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-APLCH-IGGLSSAMAM 127
I FTSGTTGSPKG ++H ++ GY L PL H G + ++
Sbjct: 224 IQFTSGTTGSPKGATLTHHNIVNNGYLMGLRTGYHLKAHRLCLPVPLYHCFGCVMGVLSA 283
Query: 128 LMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 186
+ G +V P F ++ A++AVEQ TSL P + D+ L +K S+
Sbjct: 284 VSHGGSYVLSSPAFSARKAVKAVEQERCTSLYGTPTMFVDILNLPDLKSY--DLSSLSTG 341
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
G P ++K + + AYGMTETS +TF LE
Sbjct: 342 YMAGAPCPQSIVKAVVHDLHMKDFVVAYGMTETSP-VTFSGYSSDPLEV----------- 389
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPS 301
+ +G P+ + E+KV ++ V G + TRG ML+YW+
Sbjct: 390 --------RHSTIGFPSDYTEVKVVNEDGHIVPINTPGELYTRGYSNMLKYWNDDEKTKE 441
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ + + WL TGDI ID+ G +VGR + GGEN+YP E+E +L HP + + V+
Sbjct: 442 MISVDRWLRTGDIAVIDENGYGQIVGRAKDMLIRGGENIYPREIEELLHTHPAVAEVHVI 501
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + RL E V A +RLR +E + LR CR+K + FK P+
Sbjct: 502 GVPDVRLGEEVCAWIRLRPGCVATEDD----------------LRNFCRDK-VAYFKVPK 544
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
++L+R FP T TGKI++ +R ++ L
Sbjct: 545 -YILFRDDFPKTVTGKIQKFRMREITVAELN 574
>gi|324997477|ref|ZP_08118589.1| AMP-binding domain protein [Pseudonocardia sp. P1]
Length = 571
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 176/394 (44%), Gaps = 47/394 (11%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
S A + + I +TSGTTG PKG +SH ++ + GY E D P H G
Sbjct: 201 SLAADDPINIQYTSGTTGFPKGATLSHHNILNNGYYVGKLCGYTEADRVCIPVPFYHCFG 260
Query: 121 LSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
+ + IP F+ K+ L+AVEQ TSL VP + +A L
Sbjct: 261 MVMGNLGCTTNGATMVIPAQGFDPKATLKAVEQERCTSLYGVPTMF--IAELNDPDFASY 318
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
S++ + G P E+MK+ ++ YGMTETS ++ T D +L+
Sbjct: 319 DLSSLRTGIMAGSPCPVEVMKQVVERMGMTEVTICYGMTETSP-VSTQTRADDSLDL--- 374
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRY 292
+ VG+ PH+E+KV + G + TRG VML Y
Sbjct: 375 ----------------RVSTVGRVHPHLEVKVVDPETGKTLPRGEAGELCTRGYSVMLGY 418
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
WDQ V W+ TGDI +DD G V + GR + GGENVYP E+E L H
Sbjct: 419 WDQPEKTAEVIDRARWMHTGDIAVMDDEGYVNITGRIKDMVIRGGENVYPREIEEFLYTH 478
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P ++ V+G+ +AR E + A V LRE ++ E L++ +
Sbjct: 479 PDVLDAQVIGVPDARYGEELCAWVVLREG---------------AAAMTPESLKEFATGR 523
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
L +K PR +VL FP+T TGK+R+ E+R +
Sbjct: 524 -LAHYKIPR-YVLVVDEFPMTVTGKVRKVEMREK 555
>gi|91975613|ref|YP_568272.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB5]
gi|91682069|gb|ABE38371.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB5]
Length = 518
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 172/389 (44%), Gaps = 47/389 (12%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
E + +T GTTG KGV++SH L V ++ G+ E V LH PL H+G +
Sbjct: 158 EDLACLFYTGGTTGRSKGVMLSHRNLWVNAVVTAMSFGFDESTVALHAGPLFHLGAGARV 217
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
++G HV IP+F LEA+ +H VT VP ++ + L + S+K
Sbjct: 218 YTTSIMGGRHVVIPRFAPTEVLEAISRHKVTVATFVPTMLGMILQLPDLDSY--DLSSLK 275
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
I G +P +++E FP K +YGMTE S T + D LP A
Sbjct: 276 LITYGASPMPEAVLQECLRRFPSIKFGQSYGMTELSPVATILAPDD-------HLPSA-- 326
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAK 299
P + G+P E+KV VG I+ RG VM+ YW K
Sbjct: 327 ---PRRRLR----SAGRPIVSAEVKVVDAEDRELKRGEVGEIVVRGPMVMMGYWR----K 375
Query: 300 PSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
P ++ + W+ TGD GS D G +++ R I SGGENVY EVE +L HP ++
Sbjct: 376 PELTAEALRGGWMHTGDSGSFDADGYLYISDRIKDMIISGGENVYSIEVENAVLTHPEVM 435
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
V+GI + + E V A V R LS+E L CR +
Sbjct: 436 QCAVIGIPHPKWGEAVHAVVVRRPGSS----------------LSAEELIAFCRSA-IAD 478
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
+K+PR P PL+S K+ + +R+
Sbjct: 479 YKSPRSVEFRDDPLPLSSVNKVNKAALRQ 507
>gi|359397207|ref|ZP_09190257.1| Putative acyl-CoA synthetase yngI [Halomonas boliviensis LC1]
gi|357969001|gb|EHJ91450.1| Putative acyl-CoA synthetase yngI [Halomonas boliviensis LC1]
Length = 579
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 182/389 (46%), Gaps = 47/389 (12%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSS 123
+ A+ I +TSGTTG PKG +SH ++ +G+ +D + PL H G +
Sbjct: 206 DDAINIQYTSGTTGFPKGATLSHHNILNNGFFVAESMGFTSEDRLVIPVPLYHCFGMVMG 265
Query: 124 AMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+ + GA ++ + F+ L+AV T+L VP + +A L S
Sbjct: 266 NLGCITHGATMIYPDEGFDPGKVLKAVHDQKATALYGVPTMF--IAELDHPDFPSTDLSS 323
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + G P+E+MK+ N + AYGMTETS T
Sbjct: 324 LRTGIMAGSICPAEIMKQVINKMNMKGVQIAYGMTETSPVST------------------ 365
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQF 296
N + + VG+ PH+E K+ G+ +G + TRG VML+YW+
Sbjct: 366 --QTGANDSIEKRVSTVGRTQPHLENKIVDPGNGGILPRGEIGELCTRGYSVMLKYWNND 423
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
A W+ TGD+ ++D+ G + +VGR + GGENVYP+E+E L HP I
Sbjct: 424 KATTEAIDEAGWMHTGDLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAIS 483
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ V G+ + + E ++A V+L +S E ++ E LR++C+ K +T
Sbjct: 484 EVQVTGVPDKKYGEELIAWVKL-------------NSTAGE--VTGEELREYCKGK-ITH 527
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
FK PR F + FP+T TGKI++ ++R
Sbjct: 528 FKIPRYFKFVDE-FPMTVTGKIQKFKMRE 555
>gi|332666556|ref|YP_004449344.1| long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
gi|332335370|gb|AEE52471.1| Long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
Length = 514
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 187/398 (46%), Gaps = 51/398 (12%)
Query: 57 PFTHSWA--PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAP 114
P S+A E II +TSGTTG PKG ++HS L+ ++ +VG +D L P
Sbjct: 159 PVAESYATGAEDTAIIIYTSGTTGRPKGAELTHSNLLQNAILSADLVGIRPEDTLLIVLP 218
Query: 115 LCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV 173
L HI ++ M A L A V +P+F++++ + +H VT VP + L
Sbjct: 219 LFHIFAMTVLMNAGLYRAATSVLLPRFDAEAVFGLMAKHKVTVFAGVPTMYWGLLNYREE 278
Query: 174 KKTWKGRDSVKKI-LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT 232
K + G + +I ++GG LP +++K+ F +I YGM+E S +TF
Sbjct: 279 KFDYPGIAAQLRIAVSGGASLPVQVLKDFEARF-NVPIIEGYGMSEGSPVVTFNH----- 332
Query: 233 LETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAH 287
P+ +P +G P VE+K+ D V G++L RG +
Sbjct: 333 ---------------PDRPRKPG--SIGTPVWGVEVKLIDDKGQTVPVGEKGQLLYRGHN 375
Query: 288 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 347
VM Y+ + A + S + WL +GD+ D G ++V R I GG NVYP EVE
Sbjct: 376 VMKGYYRK-PAATAESLKDGWLHSGDVAIEDADGYFYIVDRTKDMIIRGGFNVYPREVEE 434
Query: 348 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 407
V++QHP I + V+G+ + E + ACV L++ S + +K +
Sbjct: 435 VMIQHPAISMVAVIGVPDDEYGEEIKACVVLKDGVSASPEEIIEWTKER----------- 483
Query: 408 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
+ G+K PR+ L P+++TGKI + E+R+
Sbjct: 484 ------IAGYKYPRVVELLAA-LPMSATGKILKKELRK 514
>gi|113869452|ref|YP_727941.1| acyl-CoA synthetase [Ralstonia eutropha H16]
gi|113528228|emb|CAJ94573.1| Long-chain-fatty-acid-CoA ligase [Ralstonia eutropha H16]
Length = 557
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 212/444 (47%), Gaps = 54/444 (12%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 74
L+ +P L+W + +G ++ + D L A+ ++R T + + A+ I FTS
Sbjct: 156 LRSARLPRLQWVIRMGGEATPGMLNYDALLAE---PDTVRLDAVTATLSALDAINIQFTS 212
Query: 75 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGAC 133
GTTG+PKG ++H ++ + G+ DV PL H G+ S +A + VGAC
Sbjct: 213 GTTGNPKGATLTHHNVVNNGRFVAIAMRLGDSDVLCIPVPLYHCFGMVLSVLACVSVGAC 272
Query: 134 HVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
VF + F+ + ++A + T+L VP + +A L + + +++ + G
Sbjct: 273 MVFPGEAFDPLATMQAASEERCTALHGVPTMF--IAQLDHPEFSRFDFSALRTGIMAGAP 330
Query: 193 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 252
P E+MK +++ AYGMTETS P +F + T + +
Sbjct: 331 CPIEVMKRVVADMHMSEVTIAYGMTETS-------------------PVSFQSATDDPLD 371
Query: 253 QPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYW-DQFLAKPSVSTGE 306
+ + VG+ PH+E KV + G + TRG VM YW D + ++ G
Sbjct: 372 K-RVATVGRVQPHLECKVVDALGEVVPTGATGELCTRGYSVMQGYWEDDERTREAIRDG- 429
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +HP + + V G+ +
Sbjct: 430 -WMHTGDLATIDDEGYCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGVPDQ 488
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E V A + L+ QS+ +E +R+ CR++ + +K PR ++ +
Sbjct: 489 KYGEEVCAWIVLKPG---------QSATEEE-------IRKFCRDQ-IAHYKIPR-YIRF 530
Query: 427 RKPFPLTSTGKIRRDEVRREVMSH 450
P+T TGK+++ V R+ M H
Sbjct: 531 VSEMPMTVTGKVQK-FVMRDTMIH 553
>gi|407695854|ref|YP_006820642.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407253192|gb|AFT70299.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 523
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 186/381 (48%), Gaps = 41/381 (10%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
++ +T GTTG PKGV++SH L +++++A + V L +PL H G++ + +
Sbjct: 167 VLLYTGGTTGFPKGVMLSHDNLWSCAISRLAESDPPDPFVTLLVSPLFHTAGVAKFITQI 226
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+VG V +P F ++ L A+E+ +T +I VP+++ L +V++ S+ ++
Sbjct: 227 VVGGTAVMMPSFRVEAVLAAIEREKITDVILVPSMIQMLVDHPKVRE--HDLSSLTRVAY 284
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G + +++ A FP A+ YGMTE S +T ++ N
Sbjct: 285 GASPISLPVLERALAVFPDAQFTHTYGMTEASPMITL---------------NSWRNHRG 329
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVS 303
+++ + GK +E+++ + VG ++ RG +VML YW+ A
Sbjct: 330 EALNNGRIRSAGKATWGMEVRIVDEDDREVPRGTVGEVVARGDNVMLGYWNNPDATAETL 389
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
G WL TGD G +D+ G +++V R I SGGENVY EVE VL +HP + V+GI
Sbjct: 390 RGG-WLHTGDGGYMDEDGYIYIVDRIKDMIVSGGENVYCAEVENVLARHPAVASCAVIGI 448
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ E V A V + + +S+E L CR+ +L G+K PR
Sbjct: 449 PHDTWGESVHAVVVTQSGVE----------------VSAEELTDFCRD-DLAGYKCPR-S 490
Query: 424 VLWRKPFPLTSTGKIRRDEVR 444
V +R PL+ GK+ + E+R
Sbjct: 491 VEFRDSLPLSGAGKVLKQELR 511
>gi|418049143|ref|ZP_12687230.1| o-succinylbenzoate--CoA ligase., 4-coumarate--CoA ligase
[Mycobacterium rhodesiae JS60]
gi|353190048|gb|EHB55558.1| o-succinylbenzoate--CoA ligase., 4-coumarate--CoA ligase
[Mycobacterium rhodesiae JS60]
Length = 1045
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 171/402 (42%), Gaps = 47/402 (11%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIG 119
S P + I +TSGTTGSPKG V+SH ++ ++ +G D P H
Sbjct: 681 ESLTPSDPINIQYTSGTTGSPKGAVLSHRNILNNGFFVTDLINFGPGDRLCIPVPFYHCF 740
Query: 120 GLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 177
G+ + IP F+ + L AVEQ T+L VP + +A L
Sbjct: 741 GMVMGNLGCTTHGATMVIPAAGFDPGATLAAVEQERCTALYGVPTMF--IAMLGHSDLAH 798
Query: 178 KGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG 237
+ S++ + G P E+MK +++ AYGMTETS ++ TL D LE
Sbjct: 799 RDVSSLRTGIMAGAPCPVEIMKRCLEQLNMSEVSIAYGMTETSP-VSCQTLIDDDLER-- 855
Query: 238 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLR 291
+ VG+ PHVE+KV + + G TRG VML
Sbjct: 856 -----------------RTATVGRAHPHVEIKVVDPETGALVERGTTGEFCTRGYSVMLG 898
Query: 292 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
YW+ E W+ TGD+ + D G +VGR + GGENVYP E+E L
Sbjct: 899 YWNDEAKTAEAIDDEGWMHTGDLAVMRDDGYCQIVGRIKDMVIRGGENVYPREIEEFLYT 958
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
HP I + V+G+ + R E + A V++R Q
Sbjct: 959 HPDIDDVQVIGVPDPRYGEEICAWVKMRAG----------------AAPLDAAAVQEFAA 1002
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
L +K PR +V FP+T TGK+R+ E+R E++ L S
Sbjct: 1003 GKLAHYKIPR-YVRVVDDFPMTVTGKVRKVEMRAEMIRLLDS 1043
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 182/385 (47%), Gaps = 51/385 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAM 127
I +TSGTTG PKG V+SH L + + + I +G+ +DD +L APL H G+S +
Sbjct: 159 FIMYTSGTTGFPKGAVLSHRNLYLHAFSSIGTLGHRADDDCWLGVAPLFHTAGVSGMLPA 218
Query: 128 LMVGACHVFIPK---FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ G V IP F++++A+ + VTS PA + + R+ + W ++
Sbjct: 219 FLTGG-KVVIPSSGGFDAEAAVRTIVAERVTSCWMTPAQWQIVCAMDRLAE-WD-LSCLR 275
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+I G + L++ T+ FP A++I+A+G TE S +T + D + G
Sbjct: 276 RIWWGAAPASTTLLRNMTDVFPGAEIIAAFGQTE-CSPITCLLRGDDAMAKIGS------ 328
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 299
VG P +VE ++ D + V G I+ +G VM YW++
Sbjct: 329 --------------VGTPMLNVEARIVDDDMNDVVPGIVGEIVYQGPLVMAGYWNKPAET 374
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
G W +GD+ D+ G +++V R+ I SGGEN+Y EVE VL HP I +
Sbjct: 375 AEAFRGG-WFHSGDLVRQDEDGYIYVVDRKKDMIISGGENIYSAEVENVLAAHPKIAEVA 433
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+G+ + + E +A + R+ D S ++ + HCRE+ L +K
Sbjct: 434 VIGVPDPKWGETPLAVIVPRDP-------ADPPSADE--------IESHCRER-LAAYKR 477
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVR 444
PR + + P ++GK+ + +R
Sbjct: 478 PRRVAIV-EALPRNASGKVLKTVLR 501
>gi|407982490|ref|ZP_11163166.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
gi|407376002|gb|EKF24942.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
Length = 562
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 172/392 (43%), Gaps = 47/392 (11%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
AP + I +TSGTTGSPKG V+SH ++ ++G+G D P H G+
Sbjct: 203 APSDPINIQYTSGTTGSPKGAVLSHRNIVNNGFFVTELIGFGPQDRLCLPVPFYHCFGMV 262
Query: 123 SAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ IP FE + L A+E T++ VP + +A L +
Sbjct: 263 MGNLGCTTHGAAIVIPAAGFEPAATLTAIETERCTAVYGVPTMF--IAMLADPDLPHREV 320
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
S++ + G P ELMK N A L AYGMTETS ++ T D L+
Sbjct: 321 SSLRTGIMAGATCPMELMKRCINELNMAGLAIAYGMTETSP-VSCQTRVDDDLDR----- 374
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 294
+ VG+ PHVE+K+ + G TRG VM YW+
Sbjct: 375 --------------RTATVGRVHPHVEIKIVDPVTGKTLPRGATGEFCTRGYSVMTGYWN 420
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
+ WL TGD+ + + G +VGR + GGENVYP E+E L HP
Sbjct: 421 DAERTREAIDPDGWLHTGDLAVMREDGYCQIVGRIKDMVIRGGENVYPREIEEFLHTHPD 480
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
I + VVG+ + R E + A +++R L + +R + R+K L
Sbjct: 481 IEDVQVVGVPDERYGEEICAWIKMRPG---------------RPPLDAAAVRAYARDK-L 524
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
FK PR +V+ FP+T TGK+R+ ++R E
Sbjct: 525 AHFKIPR-YVVVVDEFPMTVTGKVRKVQMRDE 555
>gi|421749451|ref|ZP_16186888.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator HPC(L)]
gi|409771687|gb|EKN53910.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator HPC(L)]
Length = 563
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 220/461 (47%), Gaps = 57/461 (12%)
Query: 6 ESSDSWYLELQHTAIPSLRWHVSLGS-SSSDFVNKRDMLTA-DILKGYSLRSLPFTHSWA 63
E +DS L+ +P+L+W V +G ++ V ++L+A DI + ++ S + A
Sbjct: 147 ELADSQPGTLRAARLPALQWVVRMGEEDTAGMVRYAEVLSAPDIARLDAIGS-----ALA 201
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS- 122
P + I FTSGTTG+PKG ++H ++ + E D PL H G+
Sbjct: 202 PHDPINIQFTSGTTGNPKGATLTHHNVVNNGRYVAMAMRLTERDSLCIPVPLYHCFGMVL 261
Query: 123 SAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
S +A + VGA +F + F+ + ++AV + T+L VP + +A L T
Sbjct: 262 SVLACVSVGARMIFPGEAFDPLATMQAVHEERCTALHGVPTMF--IAQLDHPDFTKFDFT 319
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P E+MK A++ AYGMTETS P
Sbjct: 320 SLRTGIMAGAPCPIEVMKRVVKDMHMAEVTIAYGMTETS-------------------PV 360
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQ 295
+F + T + + + + VG+ PH++ K+ + V G + TRG VML YW D
Sbjct: 361 SFQSATDDPLEK-RVATVGRVQPHLQCKIVDETGQVVPVGATGELCTRGYSVMLGYWEDD 419
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
+ ++ G W+ TGD+ +ID+ G +VGR + GGEN+YP E+E L +HP +
Sbjct: 420 ARTREAIRDG--WMHTGDLATIDEQGYCNIVGRVKDMVIRGGENLYPREIEEFLFRHPKV 477
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ V G+ + + E + A + L+ QS+ E +R+ CR++ +
Sbjct: 478 QAVQVFGVPDPKYGEELCAWIVLKPG---------QSATEDE-------IREFCRDQ-IA 520
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPS 456
+K PR +V + P+T TGK+++ +R ++ L P+
Sbjct: 521 HYKIPR-YVRFVDDMPMTVTGKVQKFVMRETMIRELGLEPA 560
>gi|448746178|ref|ZP_21727846.1| AMP-dependent synthetase/ligase [Halomonas titanicae BH1]
gi|445566040|gb|ELY22147.1| AMP-dependent synthetase/ligase [Halomonas titanicae BH1]
Length = 567
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 197/450 (43%), Gaps = 67/450 (14%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-------SDFV---NKRDMLTADILKGYSLRSLPFTHSWA 63
EL+ +P L ++L S SD + NK D L+ +L F
Sbjct: 155 ELKSQKLPDLECIINLSSEKLSGMWRWSDLMKEANKVSQTDVDDLQA----TLQF----- 205
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
+ A+ I +TSGTTG PKG +SH ++ +G+ +D + PL H G+
Sbjct: 206 -DDAINIQYTSGTTGFPKGATLSHHNILNNGFFVAESMGFTSEDRLVIPVPLYHCFGMVM 264
Query: 124 AMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
M + P F+ L+AV T+L VP + +A L
Sbjct: 265 GNLGCMTHGATMIYPDEGFDPGKVLKAVHDQKATALYGVPTMF--IAELEHEGFASTDFS 322
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
+++ + G P+E+MK+ N + AYGMTETS T
Sbjct: 323 TLRTGIMAGSICPAEIMKQVINKMNMKGVQIAYGMTETSPVST----------------- 365
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQ 295
N + + VG+ PH+E K+ G+ +G + TRG VML+YW+
Sbjct: 366 ---QTGANDSIEKRVSTVGRTQPHLENKIVDPGNGGILPRGEIGELCTRGYSVMLKYWNN 422
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
A W+ TGD+ ++D+ G + +VGR + GGENVYP+E+E L HP I
Sbjct: 423 DKATAEAIDEAGWMHTGDLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAI 482
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ V G+ + + E ++A V+L + ++ E LR++C+ K +T
Sbjct: 483 SEVQVTGVPDKKYGEELIAWVKLNSTAG---------------DVTGEELREYCKGK-IT 526
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
FK PR F + FP+T TGKI++ ++R
Sbjct: 527 HFKIPRYFKFVDE-FPMTVTGKIQKFKMRE 555
>gi|313233611|emb|CBY09782.1| unnamed protein product [Oikopleura dioica]
Length = 566
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 184/395 (46%), Gaps = 52/395 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALI---VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM 125
+I FTSGTTGSPKG +SH ++ +QS + ++ EDDV L P H G A
Sbjct: 210 LIKFTSGTTGSPKGATLSHHNILNNAMQSSSSERLLT-TEDDVILVNTPFYHCFGCVMAN 268
Query: 126 AMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
++ C + IP F ++ L+A + T P + DL R ++ +
Sbjct: 269 LFMLTRGCKLVIPAPTFNAEVGLDAAQAEGATVWYGTPTMFVDLLASPRRSSFVAPQEGI 328
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ ++ G P +L+++ + K+ AYG TE +S +TFMT
Sbjct: 329 RGLM-AGSICPEQLLRDLDQHY-NCKVFVAYGTTE-NSPITFMT---------------- 369
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 297
T S + + VG PH E K+ G I RG V Y+++
Sbjct: 370 ---TNESTFKQRTTTVGCVMPHTEAKLVDTEHGKTVEMGEKGEICIRGPCVFKGYFNEPE 426
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
V + W TGD+ ++D+ G V +VGR I GGEN+YP EVE+ LL+HP ++
Sbjct: 427 KTAEVVDEDGWYHTGDLATMDESGYVKIVGRAKDMIIRGGENIYPAEVESFLLKHPAVVD 486
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
VVG+ + RL E V A VRL + L+++ L+Q+ E N+T +
Sbjct: 487 AQVVGVPSKRLGEEVAAYVRLASGAE----------------LTADELKQYGFE-NMTHW 529
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
K P+ ++ + +PLT TGKIR+ E+R + K
Sbjct: 530 KVPK-YIKVVEEYPLTVTGKIRKVELRENAKNDFK 563
>gi|311107966|ref|YP_003980819.1| feruloyl-CoA synthetase 2 [Achromobacter xylosoxidans A8]
gi|310762655|gb|ADP18104.1| feruloyl-CoA synthetase 2 [Achromobacter xylosoxidans A8]
Length = 510
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 191/382 (50%), Gaps = 48/382 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I FT GTTG+PKG +++H+ L ++A++A V D L APL H+ GL + +
Sbjct: 152 ILFTGGTTGAPKGAMLTHANLWSAAVARMATVPTSPDSHTLLVAPLFHVAGLGRLIGQFV 211
Query: 130 VGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
GA V IP+ F+ ++ L+A++ VT ++ VP+++ L + W G V++++
Sbjct: 212 AGAS-VAIPRGFQPRAVLQALQDDGVTEVLLVPSMIQMLLDEPGFAQYWLG--GVQRVIW 268
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G + L+ A +FP+A+ + AYGMTET++++ + + G ++
Sbjct: 269 GASPISRALLDRALAAFPQAEFVHAYGMTETAATVAI----NAEVREGGARTES------ 318
Query: 249 NSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVS 303
G+PA VE ++ + DGS VG + RG VM YW++ + +
Sbjct: 319 ----------AGRPAIGVETRILAPDGSEAAPGAVGELAVRGPMVMQGYWNR-PEETQRA 367
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
WL TGD D+ G +++V R I SGGEN+Y EVE VL +HP + V+G+
Sbjct: 368 FDHGWLLTGDAARQDEDGYLYIVDRLKDMIVSGGENIYGAEVEGVLARHPLVARCAVIGV 427
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+AR E V A + R + + ++ L +HCR+ L FK P+ +
Sbjct: 428 VHARWGEAVHAVIVPRPG----------------MGVDADSLDRHCRQL-LAAFKCPKTY 470
Query: 424 VLWRKPFPLTSTGKIRRDEVRR 445
+ P+++ GK+ + +R+
Sbjct: 471 EFLNE-LPMSAAGKVLKSALRQ 491
>gi|398993082|ref|ZP_10696039.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
gi|398135676|gb|EJM24785.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
Length = 518
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 180/392 (45%), Gaps = 59/392 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV++SH+ + S+A +A+ YG D V+LH P+ H+ + + + +
Sbjct: 163 IFYTGGTTGFPKGVMLSHNNVASSSMATVAMGSYGADAVFLHVMPMFHLADIWAMTGLFI 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-------- 181
G HV +P F+ + L + + V ++ P T+I++ W+
Sbjct: 223 SGGSHVVLPAFDPATVLRTISEERVNQVLLAP-------TMIQMLLDWRDNHPQSAALDL 275
Query: 182 -SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
S+ + G + L+ A +FP+A+ YGMTE S P T L
Sbjct: 276 GSLTTLYYGASTITPALLDRACKAFPRAQFFQGYGMTELS----------PMAST---LS 322
Query: 241 QAFGNVTPNSVHQPQG--VCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYW 293
F +V HQ G G+ + E+++ + VG ++ RG +VML YW
Sbjct: 323 GEFHSVE----HQASGKMYSAGQASVCTEVRIVDENDCEVPRGCVGEVIVRGPNVMLGYW 378
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
+ A V+ W+ TGD G +D G + + R I SGGEN+Y EVE + H
Sbjct: 379 KKPQAT-EVALKNGWMHTGDGGYMDADGFIHICDRLKDMIISGGENIYSAEVETAIASHQ 437
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
+ V+GI + + E V A + L+ +++ D + HCRE+
Sbjct: 438 AVAQCAVIGIPSEKWGEAVHAVIVLKPD---ADAGFD-------------AILAHCRER- 480
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
+ G+K PR +R PL+ GK+ + E+R+
Sbjct: 481 IAGYKCPR-SAEFRAVLPLSGVGKVLKTELRK 511
>gi|398781291|ref|ZP_10545417.1| AMP-binding domain protein [Streptomyces auratus AGR0001]
gi|396997535|gb|EJJ08491.1| AMP-binding domain protein [Streptomyces auratus AGR0001]
Length = 546
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 181/397 (45%), Gaps = 49/397 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MA 126
V I +TSGTTG PKG +SH ++ + Y E D P H G+ +
Sbjct: 189 VNIQYTSGTTGFPKGATLSHHNILNNGYWVAETLAYTEHDRVCLPVPFYHCFGMVMGNLG 248
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
GAC V P F++ + L+ V+ TSL VP + +A L S++
Sbjct: 249 ATSHGACIVIPAPAFDAATTLQTVQDERCTSLYGVPTMF--IAELNHPDFGSYDLSSLRT 306
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+MK A++ YGMTETS ++ T D L
Sbjct: 307 GIMAGSPCPEEVMKRVVAEMHMAEVSICYGMTETSP-VSTQTRRDDDL------------ 353
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-------GRILTRGAHVMLRYWDQFLA 298
H+ + VG+ PH+E+KV +D +S V G + TRG VML YW++
Sbjct: 354 -----AHRTE--TVGRVLPHIEVKV-ADPASGVTVPRGTPGELCTRGYSVMLGYWEEPER 405
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
V W+ TGD+ ++D G V +VGR I GGENVYP E+E L HP I +
Sbjct: 406 TAEVIDAARWMHTGDLAVMNDDGYVRIVGRIKDMIIRGGENVYPREIEEFLYSHPKIADV 465
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG+ + + E + ACV LR + E L+ + L + CR + L +K
Sbjct: 466 QVVGVPDEKYGEEIAACVILR---------------DPEDPLTRDELARFCRSR-LAHYK 509
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLP 455
PR + FP+T +GK+R+ E+R + L +P
Sbjct: 510 VPRHLDIV-DAFPMTVSGKVRKVELRERLARDLGRVP 545
>gi|424851568|ref|ZP_18275965.1| dicarboxylate-CoA ligase PimA [Rhodococcus opacus PD630]
gi|356666233|gb|EHI46304.1| dicarboxylate-CoA ligase PimA [Rhodococcus opacus PD630]
Length = 530
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 205/439 (46%), Gaps = 66/439 (15%)
Query: 20 IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 79
+P L V++G+ + V + L ++ Y+ LP + +I +TSGTTG+
Sbjct: 135 VPELSLVVNIGADTEADVLGYEELVSEAGPAYAPVDLP------EDTPSLILYTSGTTGT 188
Query: 80 PKGVVISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 138
PKG V+SHS ++ QS+ I + Y DD+ +P+ H+ L S MLM+G V P
Sbjct: 189 PKGAVLSHSNMVGQSITCIRAMRYDRGDDIGFLASPVFHVAALGSVAPMLMLGGTTVIHP 248
Query: 139 --KFESKSALEAVEQHCVTSLITVP----AIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
F L+ EQ +T++ VP A+ AD T +GRD ++++ G
Sbjct: 249 LKAFNPTEMLDVWEQERITTVFLVPVQWQAVCAD--------PTVRGRDLALRVISWGAA 300
Query: 193 LPSE-LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
S+ +++ ++FP+A +++ +G TE S +T + D + G
Sbjct: 301 PASDTVLRAMADTFPRALIVAVFGQTEMSP-ITCVLDGDDAIRKLG-------------- 345
Query: 252 HQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGE 306
VGKP P ++ +V D + V G I+ RG +ML YW A G
Sbjct: 346 ------SVGKPIPTIQTRVVDDDMNDVAPGTVGEIVYRGPTMMLEYWQNPAATADAFAGG 399
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
W +GD+ DD G V++V R+ I SGGEN+Y EVE VL HP I VVG +
Sbjct: 400 -WFHSGDLVRQDDEGFVYVVDRKKDMIISGGENIYCAEVENVLFGHPRIREAAVVGRPDP 458
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ TE+ VA V L D+ S L+ E L +K L +K P+ V+
Sbjct: 459 KWTEVPVAVVALD----------DEGSD-----LTVEELAAWLDDK-LARYKHPKDVVI- 501
Query: 427 RKPFPLTSTGKIRRDEVRR 445
P ++GK+ + E+R+
Sbjct: 502 VDALPRNASGKVVKGELRK 520
>gi|296270396|ref|YP_003653028.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
gi|296093183|gb|ADG89135.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
Length = 508
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 184/390 (47%), Gaps = 47/390 (12%)
Query: 59 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI 118
T + A + +I +TSGTTG PKG ++H +++ ++ + GEDDVYL PL H
Sbjct: 162 TVTTAADDTAVILYTSGTTGQPKGAELTHQNMLMNAMVSDEMFPRGEDDVYLTVLPLFHS 221
Query: 119 GGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 177
G + M A A V +P+FE AL+ +EQ VT + VP + + T + +
Sbjct: 222 FGQTVMMNAGFRRHATLVLMPRFEPVEALKLMEQEKVTLFVGVPTMYWAMLTAVHTGQA- 280
Query: 178 KGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG 237
+++ +++GG LP E++K+ +F +++ YG++ETS +F L P PG
Sbjct: 281 SVPSALRTVVSGGASLPVEVLKDFKETF-GLQILEGYGLSETSPVASFNQLGRPA--KPG 337
Query: 238 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS---DGSSHVGRILTRGAHVMLRYWD 294
+G P VE+K+ + VG I RG +VM Y+
Sbjct: 338 --------------------SIGTPIWGVEMKLVDADWNEVDDVGEIAIRGHNVMKGYYK 377
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
+ A V + W TGDI D+ G +++ R I GG NVYP EVE VL+ HP
Sbjct: 378 RPEATAEVMK-DGWFRTGDIARRDEDGYYYIIDRAKDMIIRGGFNVYPREVEEVLMTHPA 436
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ VVG+ + E + A + + + +E +K +N+
Sbjct: 437 VSLAAVVGVPHESHGEEIKAFIIRKPGAEVTEEELIAWAK-----------------ENM 479
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+K PR+ + +R P+T+TGKI + E+R
Sbjct: 480 AAYKYPRI-IEFRDSLPMTATGKILKRELR 508
>gi|398993085|ref|ZP_10696042.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
gi|398135679|gb|EJM24788.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
Length = 522
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 176/385 (45%), Gaps = 45/385 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG PKGV++SH+ + +LA + +G VYLH P+ H+ L++ +A+ +
Sbjct: 163 LFYTGGTTGFPKGVMLSHNNIGFSALAVLGQALFGPHTVYLHAMPMFHLADLAAMVALFI 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKIL 187
G HV +P F+ + ALE + + + P ++ L D +++I
Sbjct: 223 SGGTHVVLPAFKPREALELISGEQASDTLLAPTMIQMLLDAREADPAVAVLDLSPLREIT 282
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G + L+ A +F A YGMTE S S++ + P +A
Sbjct: 283 YGASVISPALLDRARRAFSAADFQQGYGMTEMSPSISLL--------APEHHSEA----- 329
Query: 248 PNSVHQPQG--VCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKP 300
HQ G G P VE+++ VG ++ RG +VML YW++ A
Sbjct: 330 ----HQRSGKMYSAGLPINCVEVRIVDSEDREVPRGTVGEVVARGPNVMLGYWNKPEATA 385
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
G W+ TGD G +D+ G +++ R I SGGEN++ EVE+ + HP + V
Sbjct: 386 ETLRGG-WMHTGDGGYMDEDGFIYICDRLKDMIVSGGENIFTAEVESAIASHPAVAQCAV 444
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+GI + E V A + R E +S + HCRE+ + +K P
Sbjct: 445 IGIPCDKWGESVHAVIVCR----------------AESCISEHEIISHCRER-IASYKVP 487
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRR 445
R L R PL+S GK+ + E+R+
Sbjct: 488 RSVEL-RDTLPLSSVGKVLKTELRK 511
>gi|338999710|ref|ZP_08638348.1| acyl-CoA synthetase [Halomonas sp. TD01]
gi|338763390|gb|EGP18384.1| acyl-CoA synthetase [Halomonas sp. TD01]
Length = 567
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 202/458 (44%), Gaps = 67/458 (14%)
Query: 6 ESSDSWYLELQHTAIPSLRWHVSLGSSS-------SDFV---NKRDMLTADILKGYSLRS 55
E ++S +L+ +P L ++L S DF+ NK D L+ +
Sbjct: 147 ELNNSAEGQLKAQKLPDLECIINLSSDKHHGMWRWEDFIQEANKVSQTDVDDLQA----T 202
Query: 56 LPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPL 115
L F + + I +TSGTTG PKG +SH ++ +G+ +D + PL
Sbjct: 203 LQF------DDPINIQYTSGTTGFPKGATLSHHNILNNGFFVAESMGFTSEDRLVIPVPL 256
Query: 116 CHIGGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRV 173
H G+ M + P F+ L+AV + T+L VP + +A L
Sbjct: 257 YHCFGMVMGNLGCMTHGAAMIYPDEGFDPGKVLKAVHEQKATALYGVPTMF--IAELEHP 314
Query: 174 KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 233
S++ + G P+E+MK+ + AYGMTETS T
Sbjct: 315 DFATTDFSSLRTGIMAGSICPAEIMKQVIEKMNMKGVQIAYGMTETSPVST--------- 365
Query: 234 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAH 287
N + + VG+ PH+E K+ G+ +G + TRG
Sbjct: 366 -----------QTGANDTIEKRVSTVGRTQPHLESKIVDPGNGGILPRGEIGELCTRGYS 414
Query: 288 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 347
VML+YW+ A W+ TGD+ ++D+ G + +VGR + GGENVYP+E+E
Sbjct: 415 VMLKYWNNDKATTEAIDEAGWMHTGDLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEE 474
Query: 348 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 407
L HP I + V G+ + + E ++A V+L + S D ++ E LR+
Sbjct: 475 FLYAHPAISEVQVTGVPDKKYGEELIAWVKL------NSSAGD---------VTGEDLRE 519
Query: 408 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
+C+ K +T FK PR F + FP+T TGKI++ ++R
Sbjct: 520 YCKGK-ITHFKIPRYFKFVDE-FPMTVTGKIQKFKMRE 555
>gi|441513325|ref|ZP_20995156.1| putative fatty-acid--CoA ligase [Gordonia amicalis NBRC 100051]
gi|441451942|dbj|GAC53117.1| putative fatty-acid--CoA ligase [Gordonia amicalis NBRC 100051]
Length = 551
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 208/467 (44%), Gaps = 56/467 (11%)
Query: 1 MLVTDESSDSWYLELQHTA---IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLP 57
+L + DS Y + A P LR V+ S+D+ + LTA R
Sbjct: 127 VLAAERFKDSGYASMLAEARPHCPDLRTVVTF--ESTDWAD----LTATPSDEELARVAD 180
Query: 58 FTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH 117
S + + + I +TSGTTG PKG +SH + ++ Y +D P H
Sbjct: 181 IAASLSADDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGELLDYTAEDRICLPVPFYH 240
Query: 118 -IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVK 174
G + +A GA V P F+ ++ L+AV +H TSL VP + +A+LA L
Sbjct: 241 CFGMVMGNLAATSHGAAMVIPGPAFDPRATLDAVAEHRCTSLYGVPTMFIAELALLDAAP 300
Query: 175 KTWK-GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 233
+ S++ + G P ++M++ + +++ YGMTETS T + DP
Sbjct: 301 DGYAPDLSSLRTGIMAGSPCPEQVMRQVVDRMHMSEVSICYGMTETSPVSTQTRVDDPL- 359
Query: 234 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS------SHVGRILTRGAH 287
+ + VG+ PH+E+K+ + G+ + G + TRG
Sbjct: 360 -------------------ELRVTTVGQVGPHLEIKIVAPGTGETLGRNETGELCTRGYS 400
Query: 288 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 347
VM YW+ + W+ TGD+ +DD G V + GR + GGEN+YP E+E
Sbjct: 401 VMTGYWNDPEKTAEAIDADGWMHTGDLAEMDDAGYVRITGRIKDMVIRGGENIYPREIEE 460
Query: 348 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 407
L HP I+ V+G+ + + E ++A VRLR + D ++++ ++ R
Sbjct: 461 FLYTHPDILDAQVIGVPDEKYGEELMAWVRLR------DHATDLTAEDVRAFADGKIARH 514
Query: 408 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
K PR +V K FP+T TGK+R+ +R E S L+ L
Sbjct: 515 ----------KIPR-YVHVVKEFPMTVTGKVRKVAMREEATSILEDL 550
>gi|384159161|ref|YP_005541234.1| AMP-binding protein [Bacillus amyloliquefaciens TA208]
gi|384164411|ref|YP_005545790.1| AMP-binding domain protein,fatty-acyl-CoA synthase [Bacillus
amyloliquefaciens LL3]
gi|384168205|ref|YP_005549583.1| AMP-binding protein [Bacillus amyloliquefaciens XH7]
gi|328553249|gb|AEB23741.1| AMP-binding domain protein [Bacillus amyloliquefaciens TA208]
gi|328911966|gb|AEB63562.1| AMP-binding domain protein,fatty-acyl-CoA synthase [Bacillus
amyloliquefaciens LL3]
gi|341827484|gb|AEK88735.1| AMP-binding domain protein [Bacillus amyloliquefaciens XH7]
Length = 546
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 183/389 (47%), Gaps = 49/389 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLM 129
+TSGTTG PKGV++SH IV + A IA + D P H G + +A +
Sbjct: 197 YTSGTTGFPKGVMLSHFN-IVNNAANIAECMKLTSSDRLCIPVPFFHCFGCVLGVLACVS 255
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GA + I +F S L+ VEQ T+L VP + +A L + V+ +
Sbjct: 256 AGAAMIPIEQFSPPSVLKTVEQEACTALHGVPTMF--IALLHDSGFSDYDLSHVRTGIMA 313
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P+E+M+E + AYG TE S +T DP
Sbjct: 314 GSPCPAEVMREVIGKMGMTDITIAYGQTEASPVITQTRTDDP------------------ 355
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVS 303
+ + G+ PH+E+++ G+S G + TRG HVM Y+ A
Sbjct: 356 --FERRVETAGRALPHIEVRIVRPGTSEEAARGEQGELCTRGYHVMKGYYKNQEATEEAI 413
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + + VVG+
Sbjct: 414 DKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGV 473
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E A +RL++ Q++ S+E +R C+E N+ +K PR +
Sbjct: 474 PDPKYGEEAAAWIRLKDG---------QTA-------SAEDIRTFCKE-NIARYKVPR-Y 515
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
VL+ +P+T++GKI++ ++R + + LK
Sbjct: 516 VLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|424855471|ref|ZP_18279772.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356663223|gb|EHI43349.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 502
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 186/393 (47%), Gaps = 58/393 (14%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIG 119
H + A ++ +TSGT+G PKGV +SH AL + + + DDV L PL H+
Sbjct: 148 HRPTADSAALVVYTSGTSGHPKGVTLSHGALFFNGVNTLLGLDIVADDVTLVNTPLSHVA 207
Query: 120 GLSS-AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
L++ A+A L G + KF++ L +EQ VT++ VP+++ TL+ +
Sbjct: 208 ALNTLAVATLHKGGTVILDSKFDAGRCLRQIEQFAVTTMFAVPSML----TLMAQDPGFA 263
Query: 179 GRD--SVKKILNGGGGLPSELMKE-ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
G D S++ IL GG +P EL+ A+ P ++++YG+TE S++F D L++
Sbjct: 264 GADTASLRWILGGGAPMPPELVASWASRGVP---VLASYGLTEAGPSVSFRRSSDAALKS 320
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVML 290
G PA +L++ SD S VG +L RG H+
Sbjct: 321 ---------------------ASSGTPALLTDLRIVSDDGSDLPPGQVGEVLVRGPHIAS 359
Query: 291 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 350
YW A + + + WL +GD G ID G++ + GR I +GGENV P E+E +++
Sbjct: 360 GYWGNETAT-AETFRQGWLASGDRGFIDVDGDLCITGRSKEIIITGGENVDPAEIEHLVV 418
Query: 351 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 410
Q+PGI VVG + E++ A V CD + + +EL Q
Sbjct: 419 QYPGIRDAAVVGRPDPVWGEIITAVV-----------VCDDTVELEEL--------QQFL 459
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 443
L FK PR+ R+ P + GK+ R E+
Sbjct: 460 RPQLAKFKIPRILE-RRESLPRSPVGKLLRREL 491
>gi|94314357|ref|YP_587566.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
gi|93358209|gb|ABF12297.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
Length = 515
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 181/388 (46%), Gaps = 59/388 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG+PKGV++SH+ + L+ +A L AP+ HI LS +
Sbjct: 163 VLYTGGTTGAPKGVMLSHANIASNVLSSLAAASRPPVTSILQMAPMFHIAALSFVFQAVT 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKIL 187
A V +P F+ K+A+ + ++ + + TVP ++ ++ T+ D S++ I+
Sbjct: 223 RLATQVILPGFDPKAAIRDLSRYRINEVFTVPTML----KMMLDDPTFADHDLSSLRNII 278
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G + L++ A P ++ + AYGMTETS +
Sbjct: 279 YGAAPIDGALLQRAMAQIPSSQFLQAYGMTETSPVSAILA------------------AD 320
Query: 248 PNSVHQPQGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYWDQFLAK 299
+ V P+ G+PAP E+++ C G+ VG + RG VML YW+ K
Sbjct: 321 CHVVGSPRLKAAGRPAPACEVRIVDPATDEDCPTGT--VGEVAVRGPGVMLGYWN----K 374
Query: 300 PSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
P + + W+ TGD G +D G +++ R I SGGENVY EVE +L HP +
Sbjct: 375 PEETARALRNGWMHTGDAGYLDADGFLYVTDRIKDMIISGGENVYSTEVENAILTHPAVQ 434
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
V+GI + + E V A + +R + LS + + HCRE+ +
Sbjct: 435 LCAVIGIPDEKWGEAVHAVIVVRPGHE----------------LSVDAVHAHCRER-IAS 477
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+K PR V +R PL++ GK+ + ++R
Sbjct: 478 YKCPR-SVEFRADMPLSAAGKLLKYKLR 504
>gi|430804861|ref|ZP_19431976.1| AMP-dependent synthetase/ligase [Cupriavidus sp. HMR-1]
gi|429502988|gb|ELA01291.1| AMP-dependent synthetase/ligase [Cupriavidus sp. HMR-1]
Length = 515
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 181/388 (46%), Gaps = 59/388 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG+PKGV++SH+ + L+ +A L AP+ HI LS +
Sbjct: 163 VLYTGGTTGAPKGVMLSHANIASNVLSSLAAASRPPVTSILQMAPMFHIAALSFVFQAVT 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKIL 187
A V +P F+ K+A+ + ++ + + TVP ++ ++ T+ D S++ I+
Sbjct: 223 RLATQVILPGFDPKAAIRDLSRYRINEVFTVPTML----KMMLDDPTFADHDLSSLRNII 278
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G + L++ A P ++ + AYGMTETS +
Sbjct: 279 YGAAPIDGALLQRAMAQIPSSQFLQAYGMTETSPVSAILA------------------AD 320
Query: 248 PNSVHQPQGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYWDQFLAK 299
+ V P+ G+PAP E+++ C G+ VG + RG VML YW+ K
Sbjct: 321 CHVVASPRLKAAGRPAPACEVRIVDPATDEDCPTGT--VGEVAVRGPGVMLGYWN----K 374
Query: 300 PSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
P + + W+ TGD G +D G +++ R I SGGENVY EVE +L HP +
Sbjct: 375 PEETARALRNGWMHTGDAGYLDADGFLYVTDRIKDMIISGGENVYSTEVENAILTHPAVQ 434
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
V+GI + + E V A + +R + LS + + HCRE+ +
Sbjct: 435 LCAVIGIPDEKWGEAVHAVIVVRPGHE----------------LSVDAVHAHCRER-IAS 477
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+K PR V +R PL++ GK+ + ++R
Sbjct: 478 YKCPR-SVEFRADMPLSAAGKLLKYKLR 504
>gi|332662713|ref|YP_004445501.1| long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
gi|332331527|gb|AEE48628.1| Long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
Length = 567
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 190/402 (47%), Gaps = 54/402 (13%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IG 119
S A + A+ I +TSGTTG PKG +SH ++ ++ + E D + PL H G
Sbjct: 198 SLAFDEAINIQYTSGTTGFPKGATLSHHNILNNGYFVAELMNFTEKDRLVIPVPLYHCFG 257
Query: 120 GLSSAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMA---DLATLIRVKK 175
+ + + GA V+ + F++ S L AVE+ T + VP + DL +
Sbjct: 258 MVMGNLGCVTHGATMVYPSEGFDAASTLAAVEREKATGIFGVPTMFIAELDLPNFDQYDL 317
Query: 176 TWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
T S++ + G P E+MK+ + +++ AYGMTETS T + P
Sbjct: 318 T-----SLRTGIMAGSPCPIEVMKKVQSLMHVSEMEIAYGMTETSPVSTQTRVGTPL--- 369
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVM 289
+ Q VG+ PH+E+K+ + G + TRG VM
Sbjct: 370 -----------------EKQVSTVGQIHPHLEVKIIDPETGRTVPRGIPGELCTRGYSVM 412
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
L YW+ A + W+ TGD+ ++D+ G V +VGR I GGEN+YP E+E L
Sbjct: 413 LGYWNNETATRNAIDKARWMHTGDLATMDEEGYVKIVGRIKDMIIRGGENIYPREIEEFL 472
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
HP I + V+G+ +A+ E V+A +R++E L+ E ++ +C
Sbjct: 473 YTHPKISDVQVIGVPDAKYVEAVMAWIRVKEGET----------------LTVEEVQAYC 516
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ + +K P+ +V + FP+T TGKIR+ E+R + ++ L
Sbjct: 517 -QGQIAHYKIPQ-YVRFTDGFPMTVTGKIRKVEMREQSIAEL 556
>gi|403340800|gb|EJY69695.1| Long-chain-fatty-acid--CoA ligase [Oxytricha trifallax]
Length = 542
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 182/388 (46%), Gaps = 46/388 (11%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-S 123
E I FTSGTTG PKG +SH ++ + + Y +D + + PL H G+
Sbjct: 169 ESPTNIQFTSGTTGYPKGATLSHFNILNNAYFVGQGMKYTPNDKIMISVPLYHCFGMVIG 228
Query: 124 AMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+ + GA V+ + F+ K+ +EA+ Q+ TS+ VP + + K +
Sbjct: 229 NLCAINFGATMVYPSEGFDPKATMEAITQYQGTSMYGVPTMFIAMLEEYAKNKEKYNIST 288
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ G G+P L+ T+ F +L YG TE S +T T DP +
Sbjct: 289 LRTGFISGSGVPEVLVNRITSEFGLHELTHGYGQTECSPVVTMSTANDPLAK-------- 340
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQF 296
+ VGK PH+ELK+ + S G + RG VM Y++
Sbjct: 341 ------------KAKTVGKTLPHIELKIINPESGETMKWGEPGEVCARGYVVMTGYFNDA 388
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
+ W+ TGD+G DD G + ++GR I GGEN+YP+E+E ++HP +
Sbjct: 389 KRTQEAVCPKGWIRTGDLGQFDDDGFLKIIGRSKDMIIRGGENIYPKEIEEYFMKHPNVS 448
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ VVG+++ + E V A ++L+ES + + +E L +C+ + ++
Sbjct: 449 DVQVVGVSDELMGEEVCAWIKLKESGKTTP---------QEFL-------DYCKGQ-ISH 491
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+K PR ++ FPLT TGK++++E+R
Sbjct: 492 YKIPR-YIRIVDSFPLTVTGKVKKNEMR 518
>gi|407696853|ref|YP_006821641.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407254191|gb|AFT71298.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 517
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 182/383 (47%), Gaps = 45/383 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG+PKGV++SH L +L ++A V V L+++PL H+ G++S + + +
Sbjct: 162 ILYTGGTTGAPKGVMLSHRNLYSGTLGQMAAVQRSRHPVALYSSPLFHVAGMASVVQIAV 221
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
HV +P F+ L+ +E+ V VP ++ L L + ++K + G
Sbjct: 222 RQGTHVILPGFDPAVVLDTIEREGVEETFLVPTMLRML--LDHPDFSRHDLSALKYLRYG 279
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE--TPGQLPQAFGNVT 247
+ L+ A P A+ +YGMTE S ++ ++ + T E G+L A
Sbjct: 280 ASPMDEALLLRAMEVLPGAEFSQSYGMTELSPVISILSGWHHTAEGRRAGKLKSA----- 334
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSV 302
G P P+ E+++ + + VG I+ RG VM YW++ A+ +
Sbjct: 335 ------------GYPLPNAEVRIVDENDNDVPPGQVGEIIARGPMVMEGYWNK-PAQTAE 381
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ W+ TGD G +D+ G +++V R I +GGENVY EVE LL+ P + V+G
Sbjct: 382 ALRNGWMHTGDGGYMDEDGFIYVVDRIKDMIVTGGENVYSAEVENALLKLPEVAQCAVIG 441
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + R E V A V Q E D HCR+ + G+K P+
Sbjct: 442 VPDERWGERVHAVVVTAPGQQLDEQRID----------------AHCRDL-IAGYKCPK- 483
Query: 423 FVLWRKPFPLTSTGKIRRDEVRR 445
+ +R P++ GKI + E+R+
Sbjct: 484 SIEFRDALPMSGAGKILKYELRK 506
>gi|296270056|ref|YP_003652688.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
gi|296092843|gb|ADG88795.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
Length = 544
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 181/390 (46%), Gaps = 47/390 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ ++GY E D PL H G+ +A
Sbjct: 183 IQYTSGTTGFPKGATLSHHNILNNGFFVGELLGYTEQDRICLPVPLYHCFGMVMGNLAAA 242
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+C V P F+ ++ L AVE+ TSL VP + +A L + S++ +
Sbjct: 243 SHGSCVVLPAPGFDPEATLRAVERERCTSLYGVPTMF--IAELGHPEFASFDLSSLRTGI 300
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK +++ YGMTETS T T T G +
Sbjct: 301 MAGSPCPVEVMKRVVADMHMSEVAICYGMTETSPVSTM------TRRTDGLARRT----- 349
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPS 301
VG+ PH+E+K+ + VG + TRG VML YW+Q A
Sbjct: 350 ---------ETVGRVMPHIEVKIVDPETGRTVPRGQVGELCTRGYSVMLGYWEQPEATAE 400
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ ++D+ G V +VGR + GGEN+YP E+E L HP I + V+
Sbjct: 401 AIDRARWMHTGDLATMDEEGYVNIVGRIKDMVIRGGENIYPREIEEFLYTHPDIADVQVI 460
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E ++A + +R + L++E LR+ C + L +K PR
Sbjct: 461 GVPDEKYGEELMAWIIMRPGAE---------------PLTAERLREFCAGR-LAHYKIPR 504
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+V FP+T TGKIR+ E+R + + L
Sbjct: 505 -YVHVVDSFPMTVTGKIRKVEMREQAIEIL 533
>gi|374620358|ref|ZP_09692892.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
gi|374303585|gb|EHQ57769.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
Length = 560
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 206/447 (46%), Gaps = 51/447 (11%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHS-WAPEGAVIICF 72
+L+ +P L+ + +GS S + D + AD G L +L S P+ A+ I F
Sbjct: 152 QLEAAKLPHLKHIIRMGSGKSPGMYNFDEVCADASDG-DLSALADLQSKLKPDDAINIQF 210
Query: 73 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVG 131
TSGTTG+PKG +SH ++ + D PL H G+ A +A + G
Sbjct: 211 TSGTTGNPKGATLSHCNILNNGYLTGEAMRLTPADKLCIPVPLYHCFGMVLAVLACISHG 270
Query: 132 ACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
+ VF + F+ + L+ V+ T+L VP + + L S++ + G
Sbjct: 271 STMVFPGEAFDPEQTLQTVQDEQCTALHGVPTMF--ITELDHPNFGHFDLSSLRTGIMAG 328
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P E+MK + ++ AYG TE S + MTL D +L+ +
Sbjct: 329 APCPVEVMKRVISEMHMQDILIAYGQTELSP-INNMTLPDDSLKRRTE------------ 375
Query: 251 VHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVST 304
VG+ P VE+K+ D + HV G I TRG VM YW+
Sbjct: 376 -------TVGRAMPWVEIKII-DEAGHVVPVGQKGEICTRGYSVMQGYWNDPEKTAETID 427
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
WL +GDI ++D G V +VGR I GGEN+YP EVE L QHP I + V GI
Sbjct: 428 ASGWLHSGDIATMDASGYVRIVGRIKDMIIRGGENIYPREVEEFLYQHPAITEVQVFGIP 487
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ ++ E V A ++L E L+++ ++ +C+++ +T FK PR +
Sbjct: 488 DEKMGEEVCAWIQLNEGAD----------------LTADDVKAYCKDQ-ITHFKVPR-HI 529
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ +P+T TGKI++ +R E+++ L
Sbjct: 530 RFVSEYPMTVTGKIQKFVMRDEMLALL 556
>gi|449283065|gb|EMC89768.1| Acyl-CoA synthetase family member 2, mitochondrial, partial
[Columba livia]
Length = 558
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 185/375 (49%), Gaps = 41/375 (10%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-APLCHIGGL-SSAMAM 127
I FTSGTTGSPKG +SHS ++ + +G+ E D + APL H L + M
Sbjct: 220 IQFTSGTTGSPKGATLSHSNIVNNANLIGMRLGFTEQDYRVVIPAPLYHCLALVGGCVVM 279
Query: 128 LMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVK 184
+ G+ +F P FE K+ALE+V Q + + P + D+ + + ++ D S++
Sbjct: 280 ALHGSSCIFSSPTFEGKAALESVSQEKCSFIHGTPTMFIDMIS----QPNFESYDLSSLR 335
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G +P E+++ + + + AYG TE +S +TFM D ++ + + G
Sbjct: 336 GGVIAGSPVPPEVIRTVISKMHMQEAVIAYGTTE-NSPVTFMGFPDDSV---AKRTETVG 391
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
+ PN+ + + GK P + G + RG VML YW+ V T
Sbjct: 392 CILPNTEAKIEDPETGKLVP----------PNTPGELQIRGYCVMLGYWNDPSKTSEVIT 441
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
E W TGDI S+D+ G +VGR I GGENVYP E+E L HP + + VVG+
Sbjct: 442 AERWYKTGDIASLDEHGYCRIVGRCKDMIIRGGENVYPAEIEQFLHTHPKVKEVQVVGVK 501
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
++R+ E + AC+R+ +E E ++ C+ K ++ FK PR ++
Sbjct: 502 DSRMGEEICACIRVCAGQDCTE----------------EEIKAFCKGK-ISHFKIPR-YI 543
Query: 425 LWRKPFPLTSTGKIR 439
++ +PLT +GK+R
Sbjct: 544 VFVAQYPLTVSGKVR 558
>gi|404259662|ref|ZP_10962970.1| putative acid--CoA ligase [Gordonia namibiensis NBRC 108229]
gi|403401831|dbj|GAC01380.1| putative acid--CoA ligase [Gordonia namibiensis NBRC 108229]
Length = 499
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 182/393 (46%), Gaps = 43/393 (10%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
E ++ TSGTT PK V + H L A + G GED+ L T P H+ + +
Sbjct: 139 EAPAVLLHTSGTTSKPKVVPLRHENLQAYVFATVDFAGAGEDEAALITVPPYHVAAVGAT 198
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ G V +P F+++ LE V + ++S VP ++A + + +++
Sbjct: 199 LTNFYGGRRVVHLPDFDAREWLELVARESISSATVVPTMLARIVDAL--DGDLAETPALR 256
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
I GG LP +++ A +FP A +AYG+TETSS+L + P QA
Sbjct: 257 LISYGGARLPLPVLERAMQAFPDAGFCNAYGLTETSSTLALLG--------PDDHAQAVA 308
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAK 299
+ P + + VG+P P +E+++ G VG + RGA V Y L K
Sbjct: 309 SDDPLIRRRLE--SVGRPVPGMEIEIRDADGRPVGPGDVGSLFVRGAQVSGSY----LGK 362
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
SV + W T D +DD G +++ GR + I GGEN+ P E+E VLL HP +
Sbjct: 363 GSVLDAQGWFPTNDQAWVDDEGYLFIAGRADDTIIRGGENIGPAEIEDVLLTHPAVRETA 422
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+G+ + + +VA + + + +S E +R H R + L G +
Sbjct: 423 VIGLPDEEWGQRLVAVI----------------VADPQAGISEEEVRSHVRAR-LRGSRT 465
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
P V+W P T+TGK+ +RR++++ +
Sbjct: 466 PDE-VIWVDELPQTATGKV----LRRQLVAQFE 493
>gi|384440097|ref|YP_005654821.1| Long-chain fatty acid--CoA ligase [Thermus sp. CCB_US3_UF1]
gi|359291230|gb|AEV16747.1| Long-chain fatty acid--CoA ligase [Thermus sp. CCB_US3_UF1]
Length = 548
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 193/418 (46%), Gaps = 65/418 (15%)
Query: 48 LKGYSLRSLPFTHSWAPEGAVIIC-------FTSGTTGSPKGVVISHSALIVQSLAKIA- 99
L+G R+ F +W PE + +T GTTG KG +++H L +L A
Sbjct: 174 LEGIPWRA--FLKAWKPEPVALDLDDLALLQYTGGTTGVAKGAMLTHRNLSTNALQVRAW 231
Query: 100 IVGYGE-DDVYLHTAPLCHIGGLSSAMAMLMVGACH-VFIPKFESKSALEAVEQHCVTSL 157
I + E ++V L P H+ G++ AM + ++GA V +P+ E K +EA+E+H VT
Sbjct: 232 IPDFREGEEVVLGAIPFFHVYGMTVAMNLALLGAAKLVLLPRPEIKPIVEAIEKHGVTLF 291
Query: 158 ITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 217
VP + ++ + S++ ++G LP E+ E AKL+ YG+T
Sbjct: 292 PGVPTLYVAFNNFPGIEG--RSLKSIRACISGSAPLPLEVA-ERFEKLTGAKLVEGYGLT 348
Query: 218 ETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH 277
E S LY P + G+V G P P VE KV +
Sbjct: 349 EASPVTHCNPLYGP---------RKLGSV-------------GLPFPGVEAKVVDEEGKE 386
Query: 278 -----VGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRR 329
VG ++ +G +VM YW+ +P S + WL TGD+ +D G ++V R+
Sbjct: 387 LPPGEVGELILKGPNVMKGYWN----RPEESQKTLKDGWLFTGDLAKMDPDGYFYIVDRK 442
Query: 330 NGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNC 389
I +GG N+YP EVE VL QHP + VVG+ + E V A + L++ ++ S
Sbjct: 443 KDMIIAGGYNIYPREVEEVLYQHPAVQEAAVVGVPDPYRGETVAAFIVLKDEYKGKVSEK 502
Query: 390 DQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 447
D + CR+ NL +K PR+ + +R P +S GKI + E+ +EV
Sbjct: 503 D--------------IETFCRQ-NLAAYKVPRI-LQFRDTLPKSSVGKILKRELAKEV 544
>gi|118099923|ref|XP_420105.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Gallus gallus]
Length = 593
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 196/393 (49%), Gaps = 43/393 (10%)
Query: 68 VIICFTSGTTGSPKGVVISH------SALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGG 120
V I FTSGTTGSPKG +SH + LI L VG + V + APL H +
Sbjct: 235 VNIQFTSGTTGSPKGATLSHRNIVNNANLIGMRLGITEQVGPADYRVCI-PAPLYHCLAS 293
Query: 121 LSSAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
+ M + G+ VF P FE K+ LEAV Q + L P + D+ L +
Sbjct: 294 VGGCMVSALHGSSCVFSAPSFEGKATLEAVSQEKCSFLHGTPTMFIDM--LSQPDFDSYN 351
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
S++ + G +P E+MK + +++ AYG TE +S +TFM PT + +
Sbjct: 352 LSSLRGGVIAGSPVPPEIMKVVSTKMHMPEVMVAYGTTE-NSPVTFMGF--PTDDITRRT 408
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAK 299
+ G++ P++ + + KP P + G + RG VML YW+
Sbjct: 409 -ETVGSILPHTEAKIEDPETRKPVP----------LNTPGELQVRGYCVMLGYWNDSART 457
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
V + + W TGDI ++D+ G ++GR I GGEN+YP E+E L HP + +
Sbjct: 458 REVISDDNWYKTGDIATLDEHGYCRIIGRCKDMIIRGGENIYPAEIEQFLHTHPKVEEVQ 517
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VVG+ ++R+ E V AC+RLR + +C +++ ++ C+ K ++ FK
Sbjct: 518 VVGVKDSRMGEEVCACIRLR-----AGQSC-----------AADDIKAFCKGK-ISHFKI 560
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
PR +V++ +PLT +GK+++ ++R ++ HL+
Sbjct: 561 PR-YVVFVNQYPLTVSGKVQKYKLREQMEKHLQ 592
>gi|410862984|ref|YP_006978218.1| AMP-binding protein [Alteromonas macleodii AltDE1]
gi|410820246|gb|AFV86863.1| AMP-binding domain protein [Alteromonas macleodii AltDE1]
Length = 579
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 203/457 (44%), Gaps = 47/457 (10%)
Query: 3 VTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW 62
+ D+ +DS L + +PSL++ ++G+ D + L + + ++
Sbjct: 155 IEDDRNDSLAQPLSLSMLPSLKFIYTIGNQPVDRLLPFSALQREPTESLRIKLTEIEAEL 214
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
+ + + I FTSGTTG+PKG ++H ++ L + + D PL H G+
Sbjct: 215 SADDNINIQFTSGTTGNPKGATLTHRNILNNGLLVAQAMRFTHKDKLCIPVPLYHCFGMV 274
Query: 123 -SAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ L GAC VF + F ++ L VE+ T+L VP + L K+
Sbjct: 275 LGNLVCLASGACAVFPGESFAPETTLRTVEEEKCTALHGVPTMFIAELELPNFKEF--DL 332
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
+++ + G P ELM++ + F +++ YG TE S + +T D E
Sbjct: 333 STLRTGVMAGSTCPEELMRKVHSEFNMTEVVIGYGQTE-CSPINHITDIDSPFEK----- 386
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQ 295
Q VG+ PH E+K+ + + G I +G VM YW
Sbjct: 387 --------------QVKTVGRAMPHTEVKIIDAKGNTLPIGEPGEICAKGYCVMKGYWGD 432
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
+ E WL +GD+G +DD G V +VGR I GGEN+YP E+E VL QH +
Sbjct: 433 EAKTKATIDDEGWLHSGDLGEMDDEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHNDV 492
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
V GI + R E V ++ +E+ E E +R++ + K L
Sbjct: 493 SDAAVFGIPDDRYGEQVCLWIKAKENRHIDE----------------EKIREYLKSK-LA 535
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
FK P+ ++ + +P+T TGK+++ ++R ++ LK
Sbjct: 536 YFKVPK-YINVVQDYPMTVTGKLQKFKMREHMIETLK 571
>gi|52143488|ref|YP_083341.1| acyl-CoA synthetase [Bacillus cereus E33L]
gi|51976957|gb|AAU18507.1| AMP-binding protein [Bacillus cereus E33L]
Length = 496
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 188/393 (47%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE AL +E+H VT ++ VP I L + + T SV+
Sbjct: 210 FPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP E ++ + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCEYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TEETIQDG--WLYTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG + + E+ +A + K+ +L+ +V+ +HCR L +
Sbjct: 422 VAVVGRQHVKWGEIPIAFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ +++ K FP +TGKI++ ++ ++ S
Sbjct: 465 KIPKE-IVFLKEFPKNATGKIQKAQLTNQLKSR 496
>gi|374366830|ref|ZP_09624904.1| AMP-dependent synthetase and ligase [Cupriavidus basilensis OR16]
gi|373101697|gb|EHP42744.1| AMP-dependent synthetase and ligase [Cupriavidus basilensis OR16]
Length = 519
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 179/381 (46%), Gaps = 40/381 (10%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV++SH+ L LA A YLH AP+ H+ + AM M
Sbjct: 163 IFYTGGTTGFPKGVMLSHANLCASGLALRAEGLATPGGTYLHAAPMFHLADMGLAMPQWM 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G H IP F + L+ +E+ VT ++ VP ++ + +KK + +++ I+ G
Sbjct: 223 EGNTHAIIPAFNPELVLDTLERDRVTHMLLVPTMIQMMVDHPAMKKP-RDLSALQAIIYG 281
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ +++ A + P + AYGMTE S T + T E Q G +
Sbjct: 282 ASPISEAVLERAMAALPGVGFVQAYGMTELSPLATINPAWYHTAEGRAQ-----GKLR-- 334
Query: 250 SVHQPQGVCVGKPAPHVELKV-----CSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
G+ + E+++ C VG + RG VM YW++ A+ + +
Sbjct: 335 --------AAGRASYTSEVRIVDGEGCEVPRGTVGEVAVRGPTVMQGYWNK-PAENAAAV 385
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
+ W+ TGD G +D+ G +++V R I SGGENVY EVE L QHP ++ V+G+
Sbjct: 386 RDGWMHTGDGGYMDEDGFIFIVDRLKDMIVSGGENVYSAEVENALAQHPAVVASAVIGVP 445
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+A E V A V R S+ EL+ HC+ + G+K PR V
Sbjct: 446 SAEWGEAVHAVVVGRPG---------TSATAGELI-------DHCKTL-IAGYKCPR-SV 487
Query: 425 LWRKPFPLTSTGKIRRDEVRR 445
+R PL+ GKI + E+R+
Sbjct: 488 EFRDALPLSGAGKILKIELRK 508
>gi|138895109|ref|YP_001125562.1| AMP-binding protein [Geobacillus thermodenitrificans NG80-2]
gi|196248309|ref|ZP_03147010.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
gi|134266622|gb|ABO66817.1| Long-chain fatty-acid-CoA ligase [Geobacillus thermodenitrificans
NG80-2]
gi|196212034|gb|EDY06792.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
Length = 544
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 183/395 (46%), Gaps = 53/395 (13%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-I 118
S P A+ + +TSGTTG PKGV++SH ++ + + GE D P H
Sbjct: 182 ESLDPHDAINMQYTSGTTGFPKGVMLSHYNIVNNAHQVAQCMKLGEGDRLCIPVPFFHCF 241
Query: 119 GGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
G + S +A + VGA V + +F K LE V T+L VP + +A L
Sbjct: 242 GCVMSTLACVTVGATMVPVVEFHPKRVLETVAAERCTALHGVPTMF--IAELNDPDFDQY 299
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT---LET 235
S++ + G P E+MK N + AYG TE+S +T DP +ET
Sbjct: 300 DLSSLRTGIMAGSPCPVEVMKAVINKMGMTDITIAYGQTESSPVITQTRTDDPIELRVET 359
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVM 289
VG+ P VE+K+ G+ + G + TRG HVM
Sbjct: 360 -----------------------VGRALPGVEVKIVEPGTCNEVPRGVQGELCTRGYHVM 396
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
Y++ A + WL TGD+ ++D+ G + GR I GGEN+YP E+E L
Sbjct: 397 KGYYNNPEATNEAIDEDGWLHTGDLATMDENGYCRITGRLKDMIIRGGENIYPREIEEFL 456
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
+HP I+ + VVG+ + R E V+A + L++ ++E +R+ C
Sbjct: 457 YKHPKILDVQVVGVPDERYGEEVMAWIILKDGET----------------ATAEEIREFC 500
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
R N++ K PR ++ + +P+T++GKI++ ++R
Sbjct: 501 R-GNISRHKIPR-YIEFTDSYPMTASGKIQKFKLR 533
>gi|297616773|ref|YP_003701932.1| AMP-dependent synthetase and ligase [Syntrophothermus lipocalidus
DSM 12680]
gi|297144610|gb|ADI01367.1| AMP-dependent synthetase and ligase [Syntrophothermus lipocalidus
DSM 12680]
Length = 503
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 175/381 (45%), Gaps = 50/381 (13%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
+P+ V I +TSGTTG PKG + SH L+ I+ + DV L P CHI +
Sbjct: 160 SPDDIVSILYTSGTTGQPKGAMHSHGNLMAIGTLSSRILRIDDQDVLLTPTPFCHICFVL 219
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
SA+ L VGAC V + +F ALE + ++ VT VP + + L ++ S
Sbjct: 220 SALGPLNVGACSVTMRRFSPDKALELISRYRVTHFTGVPTMF--IYMLHHFEEDKYDLTS 277
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
K G +P + +KE F + YG+TET+S++T+
Sbjct: 278 WKYAYAAGASMPVQYIKEVEEKF-GVEFAELYGLTETTSTVTY----------------- 319
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFL 297
N + + VG A E+K+ + + VG IL +G V YW+
Sbjct: 320 ------NRIGHGKKGSVGLAAEGTEVKLVDEAGNQARVGEVGEILVKGPGVFKGYWEMPE 373
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
A GE W TGD+G D+ G +++VGR+ I GG NVYP E+E V+ QHP +
Sbjct: 374 ATREAFDGE-WYRTGDLGKYDEEGYLYIVGRKKEMIVCGGYNVYPREIEEVICQHPKVAE 432
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
VVG+ ++ E+ A VRL E + +E +ELL + C ++ + +
Sbjct: 433 AAVVGVRDSARNEIPKAFVRLNEGEEMTE---------QELL-------EFCAQR-MASY 475
Query: 418 KAPRLFVLWRKPFPLTSTGKI 438
K PR V + P + +GKI
Sbjct: 476 KVPRQ-VEFVPELPKSPSGKI 495
>gi|410697627|gb|AFV76695.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Thermus
oshimai JL-2]
Length = 560
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 207/453 (45%), Gaps = 65/453 (14%)
Query: 15 LQHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILK--GYS-----LRSLPFT-HSWAPE 65
+QHT + +R ++ + KRD L + G+ L++ P T H PE
Sbjct: 146 VQHTVVTGIRDYLPFPKNLLYPLKAKRDGLPLGFPRRQGFHAFTELLKAGPATPHPADPE 205
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGED----DVYLHTAPLCHIGGL 121
++ +T GTTG KG +++H L+ L A +D V L P H+ G+
Sbjct: 206 DLALLQYTGGTTGVSKGAMLTHKNLVANVLQIDAWDPTSKDLHGQGVMLGALPFFHVYGM 265
Query: 122 SSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ AM L G V +P+ E +EA+E+H VT VP + ++ GR
Sbjct: 266 TVAMNYGLYAGFKIVLLPRPEIGPIVEAIEKHKVTHFPGVPTLYVAFNNFPGIE----GR 321
Query: 181 D--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
+ S++ L+G LP E+ K A+LI YG++E S +T +P L
Sbjct: 322 NVKSIRICLSGAAPLPVEVAKR-FEEITGARLIEGYGLSEASP----VTHSNPVL----- 371
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW 293
G + S+ G P P VE KV + V G ++ +G +VM YW
Sbjct: 372 -----GEIKKGSI--------GMPLPSVEAKVVDEEGKEVPFGEVGELIVKGPNVMKGYW 418
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
++ + S + + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL QHP
Sbjct: 419 NR-PDETSRALKDGWLFTGDLARMDEEGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHP 477
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
+ VVG+ + E V A + L+ +Q + D L CRE N
Sbjct: 478 AVQEAAVVGVPDPYRGETVAAFLVLKPEYQGKVTEKD--------------LEAFCRE-N 522
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
L +K PR+ + +R+ P +S GKI R E+R E
Sbjct: 523 LAAYKVPRI-IRFRESLPKSSVGKILRRELRDE 554
>gi|453072992|ref|ZP_21976005.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
gi|452756762|gb|EME15170.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
Length = 503
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 184/384 (47%), Gaps = 52/384 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGED----DVYLHTAPLCHIGGLSSAM 125
+ +T GTTG+PK V+ SH +L S A + G+ + L APL HI L M
Sbjct: 159 LIYTGGTTGTPKAVMHSHRSL---STALLGGTGFARSCEIGGITLVMAPLFHIAALLGMM 215
Query: 126 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
A +VG VF +F++ L + VT++ +P+++ L T SVK
Sbjct: 216 AQTVVGGTVVFANRFDAGDVLGLIAGRRVTTMTAIPSMLQMLYNHPAFSDT--DVTSVKS 273
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
I+ G +P+ +++ A + FP A + YGMTET+ ++ + G +A G
Sbjct: 274 IVYGAAPMPAAILERAMSRFPNANFVQGYGMTETAVIVSLL----------GSDHRAGG- 322
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKP 300
P+ G+ + H E+ + + V G I+TRG H+ML YW++
Sbjct: 323 --------PRLRSAGRASLHAEIIIADREGNEVPRGTVGEIVTRGEHIMLGYWNRPEETA 374
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
G WL TGD+ +DD G +++V R I +GGENVY EVE + HP ++ V
Sbjct: 375 EALRGG-WLHTGDLAYMDDEGYIFIVDRAKDMIITGGENVYSAEVEDAVANHPAVLRCAV 433
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ +A+ E V A V L N +L ++E +R+H + + + G+KAP
Sbjct: 434 IGLPDAQWGERVHAVVVL----------------NPQLHATAEEIREHVKTQ-IAGYKAP 476
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVR 444
R V + + T+TGK + +R
Sbjct: 477 RT-VAFVEALTTTATGKTDKRSLR 499
>gi|284992142|ref|YP_003410696.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
gi|284065387|gb|ADB76325.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
Length = 514
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 175/380 (46%), Gaps = 45/380 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG KGV++SH L+ ++ +A D V LH AP+ H S + +
Sbjct: 163 VFYTGGTTGRAKGVLLSHDNLLTSAMGALATDHVTPDRVLLHAAPMFHAAAFSGWVGNGV 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
VG V IP F+ + L AV++H VT ++ VP ++ + RV + +V++++ G
Sbjct: 223 VGGTQVAIPVFDPVAVLTAVQEHGVTDVLLVPTMIQLVVDHPRVDEF--DLTTVRRLMYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ L+ P A+ + AYGMTE + T +T D Q P+
Sbjct: 281 ASPMSDALLGRTMKVLPNARFLQAYGMTELAPVATLLTADD------HQDPR-------- 326
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVST 304
H+ VG+ APH E++V VG ++ RG VML YW++
Sbjct: 327 --HRR---SVGRAAPHAEVRVVGPDDVELPRGEVGEVVVRGGSVMLGYWNRPEETAEALR 381
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
G W+ TGD G +DD G ++L R I SGGENVY EVE+VL QHP + V+G+
Sbjct: 382 GG-WMHTGDAGRMDDEGYLYLTDRLKDMIISGGENVYSVEVESVLAQHPAVATCAVIGVP 440
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ E V A V ++ E LR C + L +K PR
Sbjct: 441 DDTWGERVHAVV----------------VPAAGATVTLEELRASCTGR-LASYKVPRSMD 483
Query: 425 LWRKPFPLTSTGKIRRDEVR 444
+ PL+ GK+ + E+R
Sbjct: 484 VV-DALPLSPAGKVLKRELR 502
>gi|134097188|ref|YP_001102849.1| AMP-binding protein [Saccharopolyspora erythraea NRRL 2338]
gi|291005355|ref|ZP_06563328.1| AMP-binding domain protein [Saccharopolyspora erythraea NRRL 2338]
gi|133909811|emb|CAL99923.1| AMP-dependent synthetase and ligase [Saccharopolyspora erythraea
NRRL 2338]
Length = 538
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 177/386 (45%), Gaps = 49/386 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E D P H G+ +A
Sbjct: 184 IQYTSGTTGFPKGATLSHHNILNNGFFVGELCRYTEADRVCIPVPFYHCFGMVMGNLACT 243
Query: 129 MVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 186
GA V IP F+ ++AL AV + TSL VP + +A L + S++
Sbjct: 244 SRGAAMV-IPSEGFDPRTALAAVAEERCTSLYGVPTMF--IAELDHPEFADFDLSSLRTG 300
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
+ G P E+MK+ + A++ YGMTETS T T D +LE
Sbjct: 301 IMAGSPCPVEVMKQVIDRMGMAEVAICYGMTETSPVST-QTRADDSLER----------- 348
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKP 300
+ VG+ PH+E+K+ + G + TRG VML YW+Q
Sbjct: 349 --------RVSTVGRVGPHLEVKIVDPATGLTVPRGEPGELCTRGYSVMLGYWEQADKTA 400
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
V W+ TGD+ +D V + GR + GGEN+YP E+E L HP I+ V
Sbjct: 401 EVIDAARWMHTGDLAVMDADDYVGITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQV 460
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VG+ +AR E ++A VRLRE L+ E LR+ C K L +K P
Sbjct: 461 VGVPDARYGEELMAWVRLREG---------------AAELTVEALREFCTGK-LAHYKIP 504
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRRE 446
R +V + FP+T TGK+R+ E+R E
Sbjct: 505 R-YVHVVEEFPMTVTGKVRKVEMREE 529
>gi|421501703|ref|ZP_15948660.1| AMP-binding domain protein [Pseudomonas mendocina DLHK]
gi|400347446|gb|EJO95799.1| AMP-binding domain protein [Pseudomonas mendocina DLHK]
Length = 563
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 180/389 (46%), Gaps = 47/389 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ +G E D + PL H G + + +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLSEQDRMVIPVPLYHCFGMVMGNLGCM 265
Query: 129 MVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ P FE S L+AV + T L VP + +A L ++ S++ +
Sbjct: 266 THGSTMIYPGPAFEPLSTLQAVAEERATVLYGVPTMF--IAELDHPRRAEFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK A++ AYGMTETS T DP
Sbjct: 324 MAGATCPIEVMKRVIEQMHMAEVQIAYGMTETSPVSTQSAADDPL--------------- 368
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSV 302
+ + VG+ PH+E K+ + + +G + TRG VML YW+ A
Sbjct: 369 -----ELRVASVGRTQPHLETKLVDEQGNVVPRGQIGELCTRGYSVMLGYWNNQEATQES 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ +GD+ +D+ G + +VGR I GGEN+YP E+E L HP + + V+G
Sbjct: 424 IDEAKWMHSGDLAVMDEAGYLKIVGRSKDMIIRGGENIYPREIEEFLFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I +++ E V A V+L + + +L++E L ++C+ + + FK PR
Sbjct: 484 IPDSKYGEEVAAWVKL----------------HPDQVLTAEALAEYCKGR-IAHFKVPRH 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
F + FP+T TGK+++ +R + + L
Sbjct: 527 FRFVEE-FPMTVTGKVQKFRMRELMQAEL 554
>gi|343927183|ref|ZP_08766662.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
gi|343762921|dbj|GAA13588.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
Length = 551
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 205/467 (43%), Gaps = 56/467 (11%)
Query: 1 MLVTDESSDSWY---LELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLP 57
+L + DS Y L H P LR V+ S++ LTA R
Sbjct: 127 VLAAERFKDSGYASMLAEAHPHCPDLREVVTFESAAWT------ELTATPTDEELARVAE 180
Query: 58 FTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH 117
S + + + I +TSGTTG PKG +SH + ++ Y DD P H
Sbjct: 181 IAASLSADDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGELLDYTADDRICLPVPFYH 240
Query: 118 -IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVK 174
G + +A GA V P F+ K+ L+AV +H TSL VP + +A+LA L
Sbjct: 241 CFGMVMGNLAATSHGAAMVIPGPAFDPKATLDAVAEHRCTSLYGVPTMFIAELALLDAAP 300
Query: 175 KTWK-GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 233
+ S++ + G P ++M++ + +++ YGMTETS T + DP
Sbjct: 301 DGYAPDLSSLRTGIMAGSPCPEQVMRQVVDRMHMSEVSICYGMTETSPVSTQTRVDDPL- 359
Query: 234 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS------SHVGRILTRGAH 287
+ + VG+ PH+E+K+ + G+ + G + TRG
Sbjct: 360 -------------------ELRVTTVGQVGPHLEIKIVAPGTGETLGRNETGELCTRGYS 400
Query: 288 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 347
VM YW+ + W+ TGD+ +D+ G V + GR + GGEN+YP E+E
Sbjct: 401 VMTGYWNDPEKTAEAIDADGWMHTGDLAEMDEAGYVRITGRIKDMVIRGGENIYPREIEE 460
Query: 348 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 407
L HP I+ V+G+ + + E ++A VRLR + D ++++ ++ R
Sbjct: 461 FLYTHPDILDAQVIGVPDEKYGEELMAWVRLR------DHATDLTAEDVRAFADGKIARH 514
Query: 408 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
K PR +V K FP+T TGK+R+ +R E L+ L
Sbjct: 515 ----------KIPR-YVHVVKEFPMTVTGKVRKVAMREEATHILEDL 550
>gi|228914550|ref|ZP_04078159.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228844869|gb|EEM89911.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 496
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 184/393 (46%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE AL +E+H VT ++ VP I L + + T SV+
Sbjct: 210 FPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P+ELM+E N + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPAELMREFIN---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP + + + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCDYVLIDENKNKVEIGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
K ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TKETIQDG--WLYTGDLAKVDEEGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG R+ +W E+ K +L+ + + +HCR L +
Sbjct: 422 VAVVG----------------RQHVKWGETPIAFIVKKSNSVLTEKEVIEHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ +++ K P +TGKI++ ++ ++ S
Sbjct: 465 KIPKE-IIFLKELPKNATGKIQKAQLTNQLKSR 496
>gi|385264992|ref|ZP_10043079.1| short-chain acyl-CoA synthetase [Bacillus sp. 5B6]
gi|385149488|gb|EIF13425.1| short-chain acyl-CoA synthetase [Bacillus sp. 5B6]
Length = 546
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 203/446 (45%), Gaps = 49/446 (10%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 74
L+ P LR + +G S V++ D L D S + + + +TS
Sbjct: 140 LRSKRYPFLRTVLYIGDKSPPGVHRWDSLLKDAESVTDAELDGRMDSLKKDDCIHMQYTS 199
Query: 75 GTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGA 132
GTTG PKGV++SH IV + A IA + D P H G + +A + GA
Sbjct: 200 GTTGFPKGVMLSHFN-IVNNAANIAECMKLTSSDRLCIPVPFFHCFGCVLGVLACVSAGA 258
Query: 133 CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
+ I +F + L+ VEQ T+L VP + +A L + + V+ + G
Sbjct: 259 AMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLHDSRFSEYDLSHVRTGIMAGSP 316
Query: 193 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 252
P+E+M+E + AYG TE S +T T D + + +
Sbjct: 317 CPAEVMREVIGKMGMTDITIAYGQTEASPVIT-QTRTDDSFKRRVE-------------- 361
Query: 253 QPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGE 306
G+ PH+E ++ G+S G + TRG HVM Y+ A +
Sbjct: 362 -----TAGRALPHIEFRIVRPGTSQEADRGEQGELCTRGYHVMKGYYKNQEATEEAIDKD 416
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + + VVG+ +
Sbjct: 417 GWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDP 476
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E A VRL++ Q++ S+E +R C+E ++ +K PR +VL+
Sbjct: 477 KYGEEAAAWVRLKDG---------QTA-------SAEDIRTFCKE-HIARYKVPR-YVLF 518
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHLK 452
+P+T++GKI++ ++R + + LK
Sbjct: 519 TDEYPMTASGKIQKFKLREKTIEELK 544
>gi|444305385|ref|ZP_21141168.1| AMP-dependent synthetase and ligase [Arthrobacter sp. SJCon]
gi|443482303|gb|ELT45215.1| AMP-dependent synthetase and ligase [Arthrobacter sp. SJCon]
Length = 559
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 141/474 (29%), Positives = 209/474 (44%), Gaps = 62/474 (13%)
Query: 1 MLVT---DESSDSWYLELQHTA-IPSLRWHVSL---GSSSSDF----VNKRDMLTADILK 49
MLVT D +SD + Q A P LR V L G D + ++ A++LK
Sbjct: 123 MLVTAPSDRNSDYVGMARQALAGCPDLRELVFLPAPGGEGPDGGVAPLGAAELTYAELLK 182
Query: 50 GY-SLRSLPFTHSWA---PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE 105
G ++ T A P + + +TSGTTG PKG ++H ++ A ++GY E
Sbjct: 183 GADAVAHSALTARMAELDPHDPINLQYTSGTTGFPKGATLTHHNILNNGYAIGELLGYTE 242
Query: 106 DDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAI 163
D + P H G+ + IP F +ALEAV+ TSL VP +
Sbjct: 243 HDRVVIPVPFYHCFGMVIGNLNALSHGAATIIPGRGFSPAAALEAVQDFGGTSLYGVPTM 302
Query: 164 MADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSL 223
+A L +++ + G P E+MK + + YGMTETS
Sbjct: 303 F--IAELALPDFATYDLSTLRTGVMAGSPCPVEVMKRVISDMHMKDVAICYGMTETSPVS 360
Query: 224 TFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV----- 278
T MT TL+ H+ + VG+ P +E +V S V
Sbjct: 361 T-MTRQGDTLQ-----------------HRTE--TVGRTMPRLESQVIDPASGDVLERGE 400
Query: 279 -GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGG 337
G + TRG VM YW+Q V + W+ TGD+ +DD G V + GR + GG
Sbjct: 401 IGELCTRGYAVMAGYWNQPEKTAEVIDADGWMHTGDLALMDDDGYVVIEGRIKDMVIRGG 460
Query: 338 ENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKE 397
EN+YP E+E L HP I + V+G+ + + E ++AC+ L K E
Sbjct: 461 ENIYPREIEEFLYTHPAIQDVQVIGVPDEKYGEELMACIIL---------------KPGE 505
Query: 398 LLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
L ++ + CR NL +K PR +V R FP+T +GKIR+ ++R+E + L
Sbjct: 506 EPLDADAVAGFCR-GNLAHYKIPR-YVEVRDSFPMTVSGKIRKVQMRKEAVERL 557
>gi|238025755|ref|YP_002909986.1| AMP-binding domain-containing protein [Burkholderia glumae BGR1]
gi|237874949|gb|ACR27282.1| AMP-binding domain protein [Burkholderia glumae BGR1]
Length = 590
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 132/458 (28%), Positives = 211/458 (46%), Gaps = 69/458 (15%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLP----FTHSWAPEGAVII 70
L+ +PSLR VS+ + + + + D + A +G +LR+ A + I
Sbjct: 173 LRCARVPSLRAIVSMSAQAPAGMFRFDEVLA---RGRTLRARAALDVLGAGLAQTDPINI 229
Query: 71 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLM 129
FTSGTTGSPKG ++H ++ ++A ++ G D PL H G+ +A+A +
Sbjct: 230 QFTSGTTGSPKGATLTHRNIVNNAIAIAGVMHLGAHDALCIPVPLYHCFGMVLAALACVS 289
Query: 130 VGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
GA VF F+ + LEAV+ T+L VP + + + GR ++ +
Sbjct: 290 AGAKMVFPGAAFDPLATLEAVQAERCTALHGVPTMF-----IAELDHPEFGRFDLRTLRT 344
Query: 189 G---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
G G P E+M+ A++ AYGMTETS P +F +
Sbjct: 345 GIMAGSPCPIEIMRRVVAEMHMAEVTIAYGMTETS-------------------PVSFQS 385
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW------- 293
T +S+ + + VG+ PH+E K+ + V G + TRG VM YW
Sbjct: 386 ATTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMSGYWCDGAGDG 444
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
L + ++ G W+ TGD+ + D+ G +VGR + GGEN+YP E+E L +HP
Sbjct: 445 GDALTRAAIVDG--WMHTGDLATFDEEGFCNIVGRLKDMLIRGGENIYPREIEEFLFRHP 502
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
I V G+ +A+ E V A V LR L +E LR+ CR +
Sbjct: 503 KIQSAQVFGVPDAKYGEEVCAWVVLRAGET----------------LDAEALREFCRGQ- 545
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ +K PR +V + + P+T TGK+++ +R ++ L
Sbjct: 546 IAHYKVPR-YVRFVEALPMTVTGKVQKFVMREAMIDEL 582
>gi|229491800|ref|ZP_04385621.1| feruloyl-CoA synthetase [Rhodococcus erythropolis SK121]
gi|229321481|gb|EEN87281.1| feruloyl-CoA synthetase [Rhodococcus erythropolis SK121]
Length = 503
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 184/384 (47%), Gaps = 52/384 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGED----DVYLHTAPLCHIGGLSSAM 125
+ +T GTTG+PK V+ SH +L S A + G+ + L APL HI L M
Sbjct: 159 LIYTGGTTGTPKAVMHSHRSL---STALLGGTGFARSCEIGGITLVMAPLFHIAALLGMM 215
Query: 126 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
A +VG VF +F++ L + VT++ +P+++ L T SVK
Sbjct: 216 AQTVVGGTVVFANRFDAGDVLGLIAGRRVTTMTAIPSMLQMLYNHPAFSDT--DVTSVKS 273
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
I+ G +P+ +++ A + FP A + YGMTET+ ++ + G +A G
Sbjct: 274 IVYGAAPMPAAILERAMSRFPNANFVQGYGMTETAVIVSLL----------GSDHRAGG- 322
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKP 300
P+ G+ + H E+ + + V G I+TRG H+ML YW++
Sbjct: 323 --------PRLRSAGRASLHAEIIIVDREGNEVPRGTVGEIVTRGEHIMLGYWNRPEETA 374
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
G WL TGD+ +DD G +++V R I +GGENVY EVE + HP ++ V
Sbjct: 375 EALRGG-WLHTGDLAYMDDEGYIFIVDRAKDMIITGGENVYSAEVEDAVANHPAVLRCAV 433
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ +A+ E V A V L N +L ++E +R+H + + + G+KAP
Sbjct: 434 IGLPDAQWGERVHAVVVL----------------NPQLHATAEEIREHVKTQ-IAGYKAP 476
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVR 444
R V + + T+TGK + +R
Sbjct: 477 RT-VAFVEALTTTATGKTDKRSLR 499
>gi|326931026|ref|XP_003211637.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Meleagris gallopavo]
Length = 604
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 197/393 (50%), Gaps = 43/393 (10%)
Query: 68 VIICFTSGTTGSPKGVVISH------SALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGG 120
V I FTSGTTGSPKG +SH + LI L VG + V + APL H +
Sbjct: 246 VNIQFTSGTTGSPKGATLSHRNIVNNANLIGARLGITEQVGPADHRVCI-PAPLYHCLAS 304
Query: 121 LSSAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
+ M + G+ +F P FE K+ LEAV Q + L P + D+ L +
Sbjct: 305 VGGCMVSALHGSSCIFSAPSFEGKATLEAVSQEKCSFLHGTPTMFIDM--LSQPDFDSYN 362
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
+++ + G +P E+MK + +++ AYG TE +S +TFM PT ++ +
Sbjct: 363 LSTLRGGIIAGSPVPPEIMKVISTKMHMPEILVAYGTTE-NSPVTFMGF--PT-DSFTRR 418
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAK 299
+ G++ P++ + + GKP P + G + RG VML YW+
Sbjct: 419 TETVGSILPHTEAKIEDPETGKPVP----------LNTPGELQVRGYCVMLGYWNDSART 468
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
V + + W TGDI ++D+ G ++GR I GGEN+YP E+E L HP + +
Sbjct: 469 REVISDDNWYKTGDIATLDEDGYCRIIGRCKDMIIRGGENIYPAEIEQFLHTHPKVEEVQ 528
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VVG+ ++ + E V AC+RLR + +C +++ ++ C+ K ++ FK
Sbjct: 529 VVGVKDSLMGEEVCACIRLR-----AGQSC-----------AADDIKAFCKGK-ISHFKI 571
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
PR ++++ +PLT +GKI++ ++R ++ HL+
Sbjct: 572 PR-YIVFVSQYPLTVSGKIQKYKLREQMEKHLQ 603
>gi|332142719|ref|YP_004428457.1| AMP-binding domain-containing protein [Alteromonas macleodii str.
'Deep ecotype']
gi|327552741|gb|AEA99459.1| AMP-binding domain protein [Alteromonas macleodii str. 'Deep
ecotype']
Length = 579
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 202/457 (44%), Gaps = 47/457 (10%)
Query: 3 VTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW 62
+ D+ +DS L + +PSL++ ++G D + L + + ++
Sbjct: 155 IEDDRNDSLAQPLSLSMLPSLKFIYTIGDQPVDGLLPFSALQREPTESLRIKLTEIEAEL 214
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
+ + + I FTSGTTG+PKG ++H ++ L + + D PL H G+
Sbjct: 215 SADDNINIQFTSGTTGNPKGATLTHRNILNNGLLVAQAMRFTHKDKLCIPVPLYHCFGMV 274
Query: 123 -SAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ L GAC VF + F ++ L VE+ T+L VP + L K+
Sbjct: 275 LGNLVCLASGACAVFPGESFAPETTLRTVEEEKCTALHGVPTMFIAELELPNFKEF--DL 332
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
+++ + G P ELM++ + F +++ YG TE S + +T D E
Sbjct: 333 STLRTGVMAGSTCPEELMRKVHSEFNMTEVVIGYGQTE-CSPINHITDIDSPFEK----- 386
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQ 295
Q VG+ PH E+K+ + + G I +G VM YW
Sbjct: 387 --------------QVKTVGRAMPHTEVKIIDAKGNTLPIGEPGEICAKGYCVMKGYWGD 432
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
+ E WL +GD+G +DD G V +VGR I GGEN+YP E+E VL QH +
Sbjct: 433 EAKTKATIDDEGWLHSGDLGEMDDEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHNDV 492
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
V GI + R E V ++ +E+ E E +R++ + K L
Sbjct: 493 SDAAVFGIPDDRYGEQVCLWIKAKENRHIDE----------------EKIREYLKSK-LA 535
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
FK P+ ++ + +P+T TGK+++ ++R ++ LK
Sbjct: 536 YFKVPK-YINVVQDYPMTVTGKLQKFKMREHMIETLK 571
>gi|242010698|ref|XP_002426097.1| firefly luciferase, putative [Pediculus humanus corporis]
gi|212510130|gb|EEB13359.1| firefly luciferase, putative [Pediculus humanus corporis]
Length = 582
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 190/411 (46%), Gaps = 57/411 (13%)
Query: 59 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD-VYLHTAPLCH 117
+ S PE V I FTSGTTGSPKG V+SH ++ S + E + PL H
Sbjct: 217 SKSLGPEEPVNIQFTSGTTGSPKGAVLSHFNIVNNSYCISRRQEFHEKHHIVCFMGPLFH 276
Query: 118 IGGLSSAMAMLMVGACH----VFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLI 171
L S +AML G H + IP F A+EA+ Q T L+ P + D+ ++
Sbjct: 277 --ALGSVVAML--GCVHEGLTLVIPTTAFSPTKAVEAIVQEKCTVLVGTPTMFIDVVKIV 332
Query: 172 RVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 231
+ K+ D+V+ ++GG + L + F ++ S YG+TET ++FM+
Sbjct: 333 KQKEL--KIDTVELAISGGAYTSTVLFSDMIEYFKVKRVSSVYGLTETGP-VSFMS---- 385
Query: 232 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGA 286
N + Q VG HVE KV D + G + RG
Sbjct: 386 ---------------QVNDDREKQLTTVGCLMEHVEAKVVDDNGKTLPWNTPGELWVRGY 430
Query: 287 HVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 346
++M YW T E WL TGD + + G +VGR+ I GGEN+YP ++E
Sbjct: 431 NIMKGYWSLKEKTKETITPERWLKTGDQFVLLENGYGKIVGRKKDLIIRGGENIYPADIE 490
Query: 347 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 406
L HP I+ VVG+ + RL E V AC+RL+ + L+ E ++
Sbjct: 491 EFLSTHPDILEAQVVGLPDPRLGEQVCACIRLKPN----------------SFLTEEEVK 534
Query: 407 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 457
+ C+ K + FK P +V + FP+T + K+++ +++++ + H K L SN
Sbjct: 535 EFCKGK-IADFKIP-YYVWFVDKFPITPSAKVQKYKLQQDAIKHFK-LESN 582
>gi|451346780|ref|YP_007445411.1| AMP-binding domain protein [Bacillus amyloliquefaciens IT-45]
gi|449850538|gb|AGF27530.1| AMP-binding domain protein [Bacillus amyloliquefaciens IT-45]
Length = 546
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 185/389 (47%), Gaps = 49/389 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLM 129
+TSGTTG PKGV++SH IV + A IA + D P H G + +A +
Sbjct: 197 YTSGTTGFPKGVMLSHFN-IVNNAANIAECMKLTSSDRLCIPVPFFHCFGCVLGVLACVS 255
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GA + I +F + L+ VEQ T+L VP + +A L + + V+ +
Sbjct: 256 AGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLNDSRFSEYDLSHVRTGIMA 313
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P+E+M+E + AYG TE S +T T D + E +
Sbjct: 314 GSPCPAEVMREVIGKMGMTGITIAYGQTEASPVIT-QTRTDDSFERRVE----------- 361
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVS 303
G+ PH+E+++ G+S G + TRG HVM Y+ A
Sbjct: 362 --------TAGRALPHIEVRIVRPGTSQEADRGEQGELCTRGYHVMKGYYKNQEATEEAI 413
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + + VVG+
Sbjct: 414 DKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGV 473
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E A VRL+E Q++ S+E +R C+E ++ +K PR +
Sbjct: 474 PDPKYGEEAAAWVRLKEG---------QTA-------SAEDIRTFCKE-HIARYKVPR-Y 515
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
VL+ +P+T++GKI++ ++R + + LK
Sbjct: 516 VLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|357021292|ref|ZP_09083523.1| fatty-acid--CoA ligase [Mycobacterium thermoresistibile ATCC 19527]
gi|356479040|gb|EHI12177.1| fatty-acid--CoA ligase [Mycobacterium thermoresistibile ATCC 19527]
Length = 499
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 185/404 (45%), Gaps = 66/404 (16%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA------IVGYGEDDVYLHTAPLCH 117
PE + + +T GTTG PK VV++ + LA+IA + D V LH AP+ H
Sbjct: 144 PEDPLRLAYTGGTTGKPKAVVLTTRS----ELAEIANFLVDLLPDLTPDSVMLHAAPITH 199
Query: 118 IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 177
G + + L+ GA +V +P+F + ++A +H T+ VP + +A ++ +
Sbjct: 200 GSG-AFFLPHLVKGARNVILPRFTPQGFVDAAVEHGATATFMVPTM---IAMMLEDAEID 255
Query: 178 KGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG 237
+ R ++++ GG + L+ + + YG E ++T + P TP
Sbjct: 256 RDRLKLRRLCYGGAPIAPTLLARGLETLGPV-FVQLYGQAEAPLAITCL---QPWEHTPE 311
Query: 238 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRY 292
+L A GKP VE+ + + + V G ++TRG H M Y
Sbjct: 312 RLTSA-----------------GKPYTFVEMDIRDEEDNSVPPGTPGEVVTRGPHTMSGY 354
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
W + A + WL TGDIG +D+ G ++L+ RRN I SGG NVYP EVE LL H
Sbjct: 355 WRRPEATAETLGEDGWLRTGDIGQVDEEGYLYLLDRRNDVIISGGFNVYPREVEDALLTH 414
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P + VVVG+ + R + V A V LRE + ++ L HC E+
Sbjct: 415 PAVREAVVVGVDDERWGQRVSAAVVLREE------------------VDTQALIDHCAER 456
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR------REVMSH 450
L GFK PR +W + P + GK R VR EV +H
Sbjct: 457 -LAGFKRPRHIEVWDE-LPKSPVGKSLRRTVRETMRANEEVTAH 498
>gi|300705200|ref|YP_003746803.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum CFBP2957]
gi|299072864|emb|CBJ44220.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum CFBP2957]
Length = 571
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 219/451 (48%), Gaps = 60/451 (13%)
Query: 15 LQHTAIPSLRWHVSLGSSSS-DFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICF 72
LQ +P+LRW + +G ++ +N +++ +G S +L T + +P+ A+ I F
Sbjct: 161 LQAAKLPALRWVIRMGEGATPGMINFGEVIARG--QGVSTDTLDAITAALSPDDAINIQF 218
Query: 73 TSGTTGSPKGVVISHSALIVQS-LAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMV 130
TSGTTG+PKG ++H ++ + +A+ G D + + PL H G+ S +A
Sbjct: 219 TSGTTGAPKGATLTHVNVVNNARFVAMAMNLQGTDRLCI-PVPLYHCFGMVMSVLACTAT 277
Query: 131 GACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKIL 187
GAC VF + F+ + L V + T+L VP + +A L + ++G D S++ +
Sbjct: 278 GACMVFPGEAFDPLATLRTVAEERCTALHGVPTMF--IAQLDHPE--FRGFDVSSLRGGI 333
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK ++ AYGMTETS P +F +
Sbjct: 334 MAGSPCPIEVMKRVVAEMHLREITIAYGMTETS-------------------PVSFQSAV 374
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ + + + VG+ PH+++K+ DG+ V G + T+G VML YWD AK +
Sbjct: 375 TDPLDK-RVTTVGRIQPHLQVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD-EAKTA 431
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
S + W+ TGD+ + D G +VGR + GGENVYP E+E L +HP + + V
Sbjct: 432 ESIHDGWMRTGDLATFDADGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVF 491
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E V A + L+ Q +E E +R C + + +K PR
Sbjct: 492 GVPDPKYGEEVCAWIVLKPGQQATE----------------EEIRAFC-QGQIAHYKIPR 534
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
++ + P+T TGK+++ +R ++ LK
Sbjct: 535 -YIRFVPEMPMTVTGKVQKFIMRERMIEELK 564
>gi|407984492|ref|ZP_11165107.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
gi|407373902|gb|EKF22903.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
Length = 473
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 176/390 (45%), Gaps = 48/390 (12%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 116
PF + + FTSGTTG PKG +++H + + E D YL P
Sbjct: 129 PFAREVSGTDIADVIFTSGTTGRPKGAMMNHRQTLRMYEEWATLADLREGDRYLMINPYF 188
Query: 117 HIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK 175
H GL + + A + GA V + F+ A+E +E+ +T L P + L +R K
Sbjct: 189 HTFGLKAGLVASFLRGATMVPMAVFDIDRAVELIERERITMLPGPPTLYHSLLA-VRDKS 247
Query: 176 TWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
+++ + G +P EL++ + P L++ YG+TE + TL
Sbjct: 248 KLA---TLRAAVTGAADIPVELIRRIRDELPFQSLMTGYGLTEAGNV---------TLSR 295
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQ 295
PG P+ G P VE+++ DG +L RG VM Y D
Sbjct: 296 PGDTPEQVAT------------TAGLPCDGVEVRIADDGE-----VLVRGYGVMQGYLDD 338
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
+A + WL TGD+G+ DD G + ++GR+ GG N YP E+E L+QHP +
Sbjct: 339 PVATAEAIDADGWLHTGDLGNFDDTGRLRIIGRKKDMFIVGGFNAYPAEIEGFLMQHPAV 398
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
V+G+ + RL ++ A V L K+ +S++ L RE+ +
Sbjct: 399 AQAAVIGVPDERLGQVGKAFVVL---------------KDGAPAVSADDLIAWSRER-MA 442
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
GFK PR +V + PL +TGK+ +D++++
Sbjct: 443 GFKVPR-YVEFLDALPLNATGKVMKDQLQK 471
>gi|419954341|ref|ZP_14470480.1| AMP-binding domain protein [Pseudomonas stutzeri TS44]
gi|387968892|gb|EIK53178.1| AMP-binding domain protein [Pseudomonas stutzeri TS44]
Length = 560
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 175/382 (45%), Gaps = 47/382 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG +SH ++ +G E D + PL H G+ +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLSEHDRLVIPVPLYHCFGMVMGNLGCV 265
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ P FE +AL+AV + T L VP + +A L ++ S++ +
Sbjct: 266 THGTTMIYPSAAFEPLAALQAVAEERATGLYGVPTMF--IAMLDHPERRSLDLGSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK + ++ AYGMTETS T T D LE VT
Sbjct: 324 MAGATCPIEVMKRVIDEMHMNEVQIAYGMTETSPVST-QTRADDDLER---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ PH+E K+ + + +G + TRG VML YW+ A
Sbjct: 374 ----------SVGRTQPHLESKIVDEHGAVVPRGQIGELCTRGYSVMLGYWNNPDATREA 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
G W+ TGD+ +DD G V +VGR I GGENVYP EVE L HP + + V+G
Sbjct: 424 IDGARWMHTGDLAVMDDEGYVKIVGRNKDMIIRGGENVYPREVEEFLFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ +++ E +VA V+L Q + +E LR+ C+ + + FK PR
Sbjct: 484 VPDSKFGEEIVAWVKLHPGHQ----------------VEAEALREFCKGR-IAHFKTPR- 525
Query: 423 FVLWRKPFPLTSTGKIRRDEVR 444
+ + FP+T +GK+++ +R
Sbjct: 526 HIRFVDDFPMTISGKVQKFRMR 547
>gi|404259900|ref|ZP_10963203.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
gi|403401568|dbj|GAC01613.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
Length = 551
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 184/404 (45%), Gaps = 47/404 (11%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IG 119
S + + + I +TSGTTG PKG +SH + ++ Y DD P H G
Sbjct: 184 SLSADDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGELLDYTADDRICLPVPFYHCFG 243
Query: 120 GLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTW 177
+ +A GA V P F+ K+ L+AV +H TSL VP + +A+LA L + +
Sbjct: 244 MVMGNLAATSHGAAMVIPGPAFDPKATLDAVAEHRCTSLYGVPTMFIAELALLDAAPEGY 303
Query: 178 K-GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
S++ + G P ++M++ + +++ YGMTETS T + DP
Sbjct: 304 APDLSSLRTGIMAGSPCPEQVMRQVVDRMHMSEVSICYGMTETSPVSTQTRVDDPL---- 359
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG------SSHVGRILTRGAHVML 290
+ VG+ PH+E+K+ + G + G + TRG VM
Sbjct: 360 ----------------DLRVTTVGQVGPHLEIKIVAPGMGETLGRNETGELCTRGYSVMT 403
Query: 291 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 350
YW+ E W+ TGD+ +DD G V + GR + GGEN+YP E+E L
Sbjct: 404 GYWNDPEKTAEAIDSEGWMHTGDLAEMDDAGYVRITGRIKDMVIRGGENIYPREIEEFLY 463
Query: 351 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 410
HP I+ V+G+ + + E ++A +RLR + D ++++ ++ R
Sbjct: 464 THPDILDAQVIGVPDEKYGEELMAWIRLR------DHATDLTAEDVRAFADGKIARH--- 514
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
K PR +V K FP+T TGK+R+ +R E L+ L
Sbjct: 515 -------KIPR-YVHVVKEFPMTVTGKVRKVAMREEATHILEDL 550
>gi|319653022|ref|ZP_08007127.1| acyl-CoA synthase [Bacillus sp. 2_A_57_CT2]
gi|317395371|gb|EFV76104.1| acyl-CoA synthase [Bacillus sp. 2_A_57_CT2]
Length = 550
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 222/487 (45%), Gaps = 80/487 (16%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKR-DMLTADILKGYSLRSLPFT 59
+++ ++ ++ Y+E+ ++ +P L+ S +KR L I+ G + P T
Sbjct: 110 IVLMEKFRETSYIEMLYSIVPELK-----DSEPGQLKSKRLPFLKNVIVMGE--KRFPGT 162
Query: 60 HSWAP----------------------EGAVIICFTSGTTGSPKGVVISHSALIVQSLAK 97
+SW + A+ + +TSGTTG PKGV+++H+ ++
Sbjct: 163 YSWEDMIRMGESVPDAELNERMESLDSDDAINMQYTSGTTGFPKGVMLTHNNIVNNGYNI 222
Query: 98 IAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTS 156
+ +DD P H G + MA + VGA V + +F K+ L+ V+ T
Sbjct: 223 ANCMRLTKDDRLCIPVPFFHCFGCVLGTMACISVGATIVPVQEFSPKAVLKTVQDEKCTG 282
Query: 157 LITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGM 216
L VP + +A L + +++ + G P E+MK +++ AYG
Sbjct: 283 LHGVPTMF--IAELNDPDFSKYDLSTLRTGIMAGSNCPIEVMKGVIERMGASEITIAYGQ 340
Query: 217 TETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS 276
TE+S +T DP + + VG+ P+VE+K+ G++
Sbjct: 341 TESSPVITQTRTDDPI--------------------ELRVESVGRALPNVEVKIVEPGTN 380
Query: 277 H------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRN 330
+ G + TRG HVM Y+ A E WL TGD+ +D+ G + GR
Sbjct: 381 NEVPTGEQGELCTRGYHVMKGYYKNPDATKEAIDKEGWLHTGDLAVMDENGYCKITGRLK 440
Query: 331 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 390
I GGEN+YP E+E L HP I+ + VVG+ +A E VVA + L+E + + ++
Sbjct: 441 DMIIRGGENIYPREIEEFLYTHPAILDVQVVGVPDAVYGEEVVAWIILKEDAELTPAD-- 498
Query: 391 QSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR---REV 447
LR++C+ K ++ K PR ++ + K +P+T++GKI++ ++R +EV
Sbjct: 499 --------------LREYCKGK-ISRHKIPR-YIEFTKQYPMTASGKIQKFKLREQAKEV 542
Query: 448 MSHLKSL 454
+ +L
Sbjct: 543 IEKANTL 549
>gi|407697759|ref|YP_006822547.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407255097|gb|AFT72204.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 518
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 179/385 (46%), Gaps = 48/385 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG KGV++SH L+ + +A + VYLH AP+ H+ ++ + L+
Sbjct: 162 IFYTGGTTGRSKGVMLSHGNLVANAFNALAEGLFPRGSVYLHAAPMFHLANGAAMYSQLL 221
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G +V IP F ++ AVE+H VT ++ VP ++ L V SV+++L G
Sbjct: 222 SGGANVIIPGFSPEALTAAVERHGVTDMLLVPTMIQMLVDSEAVVSA--DLSSVRRVLYG 279
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ ++ A P A + YGMTE S TF P + G
Sbjct: 280 ASPISEAVLDRALARLPDAGFVQLYGMTELSPIATF---------NPPE--NHLGEARER 328
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVST 304
+H+ G+ VE+++ D ++ VG ++ RG +M YW+ +P T
Sbjct: 329 GLHK----AAGRATLGVEVRIVGDDNNELPPGQVGEVVVRGDTLMQGYWN----RPE-ET 379
Query: 305 GEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
G+ W+ TGD G +D G +++V R I SGGENVY EVE + +HP + V
Sbjct: 380 GKAIVDGWMHTGDGGYLDADGYLFVVDRVKDMIISGGENVYSVEVENTIAEHPAVAQCAV 439
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+GI + E V A V K E + E++ C+ + + G+K P
Sbjct: 440 IGIPDDHWGEAVHAVVL---------------PKPGEAIGGDELI-TFCKAR-IAGYKCP 482
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRR 445
R + +P P++ GKI + E+RR
Sbjct: 483 RSVEVRDQPLPMSGAGKILKTELRR 507
>gi|423606283|ref|ZP_17582176.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD102]
gi|401241839|gb|EJR48217.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD102]
Length = 496
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 183/393 (46%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQDNMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE +AL +E+H VT ++ VP I L + + T SV+
Sbjct: 210 FPTLFAGGVIIIPRKFEPTTALSMIEKHKVTVVMGVPTIHQALMNCEKFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARCKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP E ++ + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCEYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
K ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TKEAIQDG--WLYTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG R+ +W E+ K +L+ + + +HCR L +
Sbjct: 422 VAVVG----------------RQHVKWGETPIAFIVKKSSSVLTEKEVIEHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ V + P +TGKI++ ++ ++ S
Sbjct: 465 KIPKEIVFLEE-LPKNATGKIQKAQLANQLKSR 496
>gi|429197284|ref|ZP_19189190.1| AMP-binding domain protein [Streptomyces ipomoeae 91-03]
gi|428667012|gb|EKX66129.1| AMP-binding domain protein [Streptomyces ipomoeae 91-03]
Length = 555
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 191/432 (44%), Gaps = 53/432 (12%)
Query: 21 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 80
P LR V +G+ D + R T D+ +R+ + + + I +TSGTTG P
Sbjct: 165 PELRETVFIGAPGWDALIARG--TPDLADDLRVRA----GELSCDDPINIQYTSGTTGFP 218
Query: 81 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IP 138
KG +SH ++ ++ YGE D P H G+ +A GAC V P
Sbjct: 219 KGATLSHHNILNNGYFVGEMIAYGEQDRICIPVPYYHCFGMVMGNLAATSHGACMVIPAP 278
Query: 139 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 198
F+ + L AVEQ TSL VP + +A L S++ + G P E+M
Sbjct: 279 SFDPAATLRAVEQERCTSLYGVPTMF--IAELNLPDFASYDLTSLRTGIMAGSPCPVEVM 336
Query: 199 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 258
K +++ YGMTETS ++ T D LE H+
Sbjct: 337 KRVVAEMHMSEVSICYGMTETSP-VSTQTRRDDDLE-----------------HRTG--T 376
Query: 259 VGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 312
VG+ PHVE+KV + G + TRG VML YW++ W+ TG
Sbjct: 377 VGRVLPHVEVKVVDPATGVTQPRGRAGELCTRGYSVMLGYWEEPEKTAEAVDAGRWMHTG 436
Query: 313 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 372
D+ ++ + G V +VGR I GGEN+YP E+E L HP I + VVG+ + R E V
Sbjct: 437 DLATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADVQVVGVPHERYGEEV 496
Query: 373 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 432
+ACV R++ L+ E LR C + L +K P + FP+
Sbjct: 497 LACVIPRDAAD---------------PLTLEELRAFC-DGRLAHYKIPSALRIL-DAFPM 539
Query: 433 TSTGKIRRDEVR 444
T +GK+R+ E+R
Sbjct: 540 TVSGKVRKIELR 551
>gi|408826805|ref|ZP_11211695.1| AMP-binding domain protein [Streptomyces somaliensis DSM 40738]
Length = 541
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 173/385 (44%), Gaps = 47/385 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MA 126
V I +TSGTTG PKG +SH ++ +GY E+D P H G+ +A
Sbjct: 188 VNIQYTSGTTGFPKGATLSHHNILNNGFFVGEALGYTEEDRICLPVPFYHCFGMVMGNLA 247
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ GAC V P F+ + L AV+Q TSL VP + +A L S++
Sbjct: 248 AVSHGACIVIPAPSFDPAATLRAVQQERCTSLYGVPTMF--IAELNLPDFAAYDLSSLRT 305
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 306 GIMAGSPCPVEVMKRVVTEMNMAEVSICYGMTETSP-VSTQTRRDDDLER---------- 354
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAK 299
+ VG+ PHVE+KV S G + TRG VML YWD+
Sbjct: 355 ---------RTGTVGRVLPHVEVKVVDPASGTTLPRGEAGELCTRGYGVMLGYWDEPERT 405
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
W+ TGD+ + + G + +VGR I GGENVYP E+E L HP + +
Sbjct: 406 AEAVDRGRWMHTGDLAVMREDGYLQIVGRIKDMIIRGGENVYPREIEEFLYSHPKVADVQ 465
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VVG+ + R E V+ACV R+ + E + +CR++ L +K
Sbjct: 466 VVGVPDERYGEEVLACVIPRDPADPP---------------TYEEIAAYCRDR-LAHYKV 509
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVR 444
PR + FP+T +GK+R+ E+R
Sbjct: 510 PRRVEVL-DAFPMTVSGKVRKVELR 533
>gi|321477421|gb|EFX88380.1| hypothetical protein DAPPUDRAFT_96055 [Daphnia pulex]
Length = 965
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 199/448 (44%), Gaps = 70/448 (15%)
Query: 16 QHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSG 75
+H +LRW + ++SD V + L +I + I FTSG
Sbjct: 574 EHQNNGALRWQDLMDLATSDLVAEIHNLQREI---------------EIDEPANIQFTSG 618
Query: 76 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT----APLCHIGG-LSSAMAMLMV 130
TTG+PKG +SH ++ + + Y D H PL H G + +
Sbjct: 619 TTGNPKGATLSHKNIVNNAYLVGLRLNY---DKMAHKICVPVPLYHCAGCVVGVLTAASH 675
Query: 131 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GA +F P F ++ A++AV T+L P + D+ L +K+ S+ +
Sbjct: 676 GATCIFPSPVFSAREAVKAVHHERCTALYGTPTMYVDILNLPDLKQY--DLKSLSTGIMA 733
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P E+ K N YGMTE S + TFMTL P+
Sbjct: 734 GAPCPEEIAKGTVNDLNMKDFAILYGMTECSPT-TFMTL-------------------PS 773
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 303
+ VG P HVE+K+ ++ + G I TRG + ML YW+Q +
Sbjct: 774 DSFDLRCSTVGYPCEHVEVKIVDPQTNEIVPVNTPGEICTRGYNTMLGYWNQPDKTSEII 833
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ + W+ +GD+G +++ G +VGR I GGENVYP E+E +L HP + VVG+
Sbjct: 834 SEDGWIRSGDLGVLNEDGYGKIVGRIKDMIIRGGENVYPREIEEILHTHPSVQEAQVVGV 893
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ RL E + A +R + ++N D S L++ C EK + FK P+ +
Sbjct: 894 PDERLGEEICAWIRCK-----PQTNSD-----------SLELKRFCSEK-MAYFKVPK-Y 935
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+++ FPLT TGK+++ E+R + L
Sbjct: 936 WMFKDKFPLTVTGKVKKFEIRNISIQEL 963
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 160/353 (45%), Gaps = 31/353 (8%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-APLCHIGGLSS 123
+ A I FTSGTTGSPKG +SH+ ++ S VGY + + + PL H G
Sbjct: 22 DDAANIQFTSGTTGSPKGATLSHNNIVNNSYNVGLRVGYHQKEHKICVPVPLYHCFGCGL 81
Query: 124 A-MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
A +A GA VF P F ++ A++A+ TSL P + D+ L +K+
Sbjct: 82 AVLAAASFGATCVFPSPVFSAREAVKAIHHERCTSLYGTPTMFVDILNLPDLKQY--DLK 139
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S+ + G P E+ K YGMTE S + TFMTL
Sbjct: 140 SLSTGIMAGAPCPEEIAKGTVKDLNMKDFAILYGMTECSPA-TFMTL------------- 185
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 295
PN + +G P H+E+K+ ++ + G I TRG + ML YW+Q
Sbjct: 186 ------PNDSFDLRCSTIGYPGEHIEVKIVDPQTNDIVPVNTPGEICTRGYNTMLGYWNQ 239
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
+ + + W+ +GD+G +++ G +VGR I GGENVYP E+E +L HP +
Sbjct: 240 PDKTSEIISEDGWIRSGDLGVLNEDGYGKIVGRIKDMIIRGGENVYPREIEEILHTHPSV 299
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 408
VVG+ + RL E + A +R + + K++ L L QH
Sbjct: 300 QEAQVVGVPDERLGEEICAWIRCKPQTNLDSLELKRFCLEKQISLLFAQLCQH 352
>gi|374985715|ref|YP_004961210.1| AMP-binding protein [Streptomyces bingchenggensis BCW-1]
gi|297156367|gb|ADI06079.1| AMP-binding domain protein [Streptomyces bingchenggensis BCW-1]
Length = 575
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 176/386 (45%), Gaps = 47/386 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMA 126
V I +TSGTTG PKG +SH ++ + +GY + D P H G ++ +
Sbjct: 202 VNIQYTSGTTGFPKGATLSHHNILNNGYSVGETLGYTQQDRVCLPVPFSHCFGMVTGNLG 261
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
GAC V P F+ + L AVEQ TSL VP + +A L S++
Sbjct: 262 ATSHGACIVIPAPTFDPAATLRAVEQERCTSLYGVPTMF--IAELGLPDFDSYDLSSLRT 319
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+++ + A++ YGMTETS T D G
Sbjct: 320 GIIAGSTCPVEVLRRVVDEMHMAEVSIFYGMTETSPVSTQTRRDDDLRHRTGT------- 372
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAK 299
VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 373 -------------VGRVLPHLEIKVVDPLTGVTVPRGTRGELCTRGYSVMLGYWEEPERT 419
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
V G W+ TGD+ +D+ G V +VGR I GGE VYP E+E L HP I +
Sbjct: 420 AEVIDGGRWMHTGDLAIMDEDGYVRIVGRIKDMIIRGGEKVYPREIEEFLYTHPKIADVQ 479
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VVG+ + + E ++ACV LRE + L+ + L + CR + L +KA
Sbjct: 480 VVGVPDEKYGEEILACVILREGAKS---------------LTRDELARFCRGR-LAHYKA 523
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRR 445
PR ++ FP+T +GK+R+ E+R+
Sbjct: 524 PR-YLRVMDAFPMTVSGKVRKVELRQ 548
>gi|229489261|ref|ZP_04383127.1| feruloyl-CoA synthetase [Rhodococcus erythropolis SK121]
gi|229324765|gb|EEN90520.1| feruloyl-CoA synthetase [Rhodococcus erythropolis SK121]
Length = 510
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 189/388 (48%), Gaps = 58/388 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYG-EDDVYLHTAPLCHIGGLSSAMAM 127
++ +T GTTG PKGV++SH +LI +L +A V L PL HI G+ +A
Sbjct: 162 LLLYTGGTTGVPKGVMVSHQSLITSALGTLAAGSVAVSGGVNLAVNPLFHIAGIVGWLAQ 221
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
++G VF+ +F LEAV++H T++ VP ++ L + KT SV+ +
Sbjct: 222 SLMGGTQVFLSRFSPGVFLEAVDRHRPTTVGLVPTMLQMLIS--HENKTSYDLTSVRVLR 279
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT--LETPGQLPQAFGN 245
G + L+ + + FP + YGMTET+ +++ P LE G+L ++ G
Sbjct: 280 YGASPISPTLLGQVMHMFPNSAFAQGYGMTETA----HISVLSPADHLEG-GELLRSAGR 334
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKP 300
+ P H E+++ + +G I+T G+H+ML YW+ KP
Sbjct: 335 ILP----------------HCEVRIVDPAGTELPPGEIGEIVTFGSHIMLGYWN----KP 374
Query: 301 SVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
+ T EV W+ TGD G +D+ G +++V R I +GGENVY EVE L +H +
Sbjct: 375 T-ETAEVLRDGWMHTGDAGYLDERGYLFIVDRIKDMIVTGGENVYSTEVENALARHESVA 433
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
V+G+ ++R E V A V LR +ES D ++ LR H + + G
Sbjct: 434 ACSVIGLPDSRWGERVHAVVVLR-----AESTVD-----------ADALRAHVKTL-IAG 476
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+K PR F + P+ GK+ + ++R
Sbjct: 477 YKVPRTF-QFVDALPVNGAGKVLKRDLR 503
>gi|229196171|ref|ZP_04322921.1| Feruloyl-CoA synthetase [Bacillus cereus m1293]
gi|423576312|ref|ZP_17552431.1| O-succinylbenzoate-CoA ligase [Bacillus cereus MSX-D12]
gi|228587329|gb|EEK45397.1| Feruloyl-CoA synthetase [Bacillus cereus m1293]
gi|401207308|gb|EJR14087.1| O-succinylbenzoate-CoA ligase [Bacillus cereus MSX-D12]
Length = 496
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 183/393 (46%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQDNMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE +AL +E+H VT ++ VP I L + + T SV+
Sbjct: 210 FPTLFAGGVIIIPRKFEPTTALSMIEKHKVTVVMGVPTIHQALMNCEKFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP E ++ + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCEYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
K ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TKEAIQDG--WLYTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG R+ +W E+ K +L+ + + +HCR L +
Sbjct: 422 VAVVG----------------RQHVKWGETPIAFIVKKSSSVLTEKEVIEHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ V + P +TGKI++ ++ ++ S
Sbjct: 465 KIPKEIVFLEE-LPKNATGKIQKAQLANQLKSR 496
>gi|404441742|ref|ZP_11006925.1| AMP-dependent synthetase and ligase [Mycobacterium vaccae ATCC
25954]
gi|403657859|gb|EJZ12613.1| AMP-dependent synthetase and ligase [Mycobacterium vaccae ATCC
25954]
Length = 502
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 191/405 (47%), Gaps = 43/405 (10%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 116
P P+ ++ FTSGTT PK V ++H+ L + + DD L P
Sbjct: 130 PAAEFADPDSVGVVLFTSGTTSRPKAVELTHTNLTSYIMGTVEFAAAEPDDAALICVPPY 189
Query: 117 HIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
HI G+S+A++ L G V++ F+++ + V + VTS VP ++ + ++ +
Sbjct: 190 HIAGVSAALSNLYAGRKMVYLTHFDAERWVRLVAEEGVTSATVVPTMLDRIVAVLEAQGI 249
Query: 177 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
+++ + GG +P L+++A + P ++AYG+TETSS++ +T D
Sbjct: 250 PL--PTLRTLAYGGSKVPLPLVRKALSLLPDVGFVNAYGLTETSSTIAVLTPDDHRAALA 307
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLR 291
G T + + G VG+P P +E+++ ++ G G + RG V +
Sbjct: 308 G---------TDEGITRRLG-SVGQPVPGIEVQIRAEDGTVLGPGETGELFVRGEQVSGK 357
Query: 292 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
Y D SV + W T D+ S+D+ G +++ GR + I GGEN+ P E+E VL++
Sbjct: 358 YTDIG----SVLDEQGWFPTRDVASLDEDGYLFIGGRSDDTIIRGGENIAPAEIEDVLVE 413
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
HP + VVG + +++VA V + Q +E LR H R
Sbjct: 414 HPHVRDCAVVGADDPEWGQIIVAVVVAQPGQQP----------------DAEQLRSHVRA 457
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPS 456
+ L G + P V++R P +TGK+ +RRE++ L PS
Sbjct: 458 Q-LRGSRTPDR-VVFRDELPTNATGKV----LRRELVDELNQDPS 496
>gi|302541757|ref|ZP_07294099.1| substrate-CoA ligase [Streptomyces hygroscopicus ATCC 53653]
gi|302459375|gb|EFL22468.1| substrate-CoA ligase [Streptomyces himastatinicus ATCC 53653]
Length = 566
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 138/469 (29%), Positives = 198/469 (42%), Gaps = 58/469 (12%)
Query: 1 MLVTDESSDSWY---LELQHTAIPSLRWHVSLGSSSSD-FVNKRDMLTADILKGYSLRSL 56
++ + E DS Y +E P+LR V +G + D V + + + L R
Sbjct: 132 LVSSTEHKDSDYRRMVEQVRAECPALRDVVYIGDRTWDGLVRAGEAVPEEKLAEREAR-- 189
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 116
+ + V I +TSGTTG PKG +SH ++ VGY E D P
Sbjct: 190 -----LSCDDPVNIQYTSGTTGFPKGATLSHHNILNNGYFVGETVGYTEQDRICLPVPFY 244
Query: 117 HIGGLSSA-MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVK 174
H G+ + GAC V P F+ + L AVEQ TSL VP + +A L
Sbjct: 245 HCFGMVMGNLGATTHGACIVIPAPAFDPAATLSAVEQERCTSLYGVPTMF--IAELALPD 302
Query: 175 KTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 234
S++ + G P E+M+ A++ YGMTETS T D
Sbjct: 303 FATFDLTSLRTGIMAGSPCPVEVMRRVVAEMHMAEVSICYGMTETSPVSTQTRRDDDLAR 362
Query: 235 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHV 288
G VG+ P+VE+KV + G + TRG V
Sbjct: 363 RTGT--------------------VGRVLPYVEVKVMDPATGLTVPRGTRGELCTRGYSV 402
Query: 289 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 348
ML YW++ W+ TGD+ +D+ G V +VGR I GGENVYP E+E
Sbjct: 403 MLGYWEEPDLTAEAIDPAGWMHTGDLAVMDEHGYVQIVGRIKDMIIRGGENVYPREIEEF 462
Query: 349 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 408
L HP I + VVG+ + + E ++ACV LRE L+ + L +
Sbjct: 463 LHTHPKIADVQVVGVPDEKYGEEILACVILREG---------------ATALTRDELARF 507
Query: 409 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 457
CR + L FK PR + FP+T +GK+R+ E+R L +P +
Sbjct: 508 CRGR-LAAFKVPRHLRVM-DAFPMTVSGKVRKVELRETGARELAGVPES 554
>gi|17545161|ref|NP_518563.1| AMP-binding protein [Ralstonia solanacearum GMI1000]
gi|17427452|emb|CAD13970.1| putative fatty-acid--coa ligase transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 571
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 216/448 (48%), Gaps = 54/448 (12%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICFT 73
L+ +P+LRW + +G ++ + + D + A +G +L T + +P+ A+ I FT
Sbjct: 161 LRAAKLPALRWVIRMGEGATPGMIRFDEVIAR-GQGVPAGTLDAITAALSPDDAINIQFT 219
Query: 74 SGTTGSPKGVVISHSALIVQS-LAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVG 131
SGTTG+PKG ++H ++ + +A+ G D + + PL H G+ S +A G
Sbjct: 220 SGTTGAPKGATLTHVNIVNNARFVAMAMNLQGTDRLCV-PVPLYHCFGMVMSVLACAATG 278
Query: 132 ACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
AC VF + F+ + L AV + T+L VP + +A L + S++ + G
Sbjct: 279 ACMVFPGEAFDPLATLRAVAEERCTALHGVPTMF--IAQLDHPEFPSFDVSSLRGGIMAG 336
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P E+MK ++ AYGMTETS P +F + +
Sbjct: 337 SPCPIEVMKRVVAEMHLREITIAYGMTETS-------------------PVSFQSAVTDP 377
Query: 251 VHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVST 304
+ + + VG+ PH+++K+ DG+ V G + TRG VML YWD AK + S
Sbjct: 378 LDK-RVTTVGRVQPHLQVKLV-DGAGEVVPVGEKGELCTRGYSVMLGYWDD-EAKTAESI 434
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
+ W+ TGD+ + D G +VGR + GGENVYP E+E L +HP + + V G+
Sbjct: 435 QDGWMRTGDLATFDADGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVP 494
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ + E V A + L+ Q ++ E +R+ C + + +K PR ++
Sbjct: 495 DPKYGEEVCAWIVLKPGQQATQ----------------EEIREFC-QGQIAHYKIPR-YI 536
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ P+T TGK+++ +R ++ L+
Sbjct: 537 RFVTEMPMTVTGKVQKFVMRERMIEELR 564
>gi|365897486|ref|ZP_09435486.1| AMP-dependent synthetase and ligase [Bradyrhizobium sp. STM 3843]
gi|365421742|emb|CCE08028.1| AMP-dependent synthetase and ligase [Bradyrhizobium sp. STM 3843]
Length = 536
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 197/443 (44%), Gaps = 74/443 (16%)
Query: 18 TAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 77
TA+P+LR + L SS F+ R + SLP A I +TSGTT
Sbjct: 150 TALPALREVIPL-SSWPAFIASR-----------ASASLPAV---ACNDVAQIQYTSGTT 194
Query: 78 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVF 136
G+PKG ++H L + +G + DV+++ P+ H G S + L G HV
Sbjct: 195 GAPKGARLTHRNLANNARLFAQTIGADDHDVWINPMPMFHTAGCSLITLGALQTGGTHVL 254
Query: 137 IPKFESKSALEAVEQHCVTSLITVPAI---MADLATLIRVKKTWKGRDSVKKILNGGGGL 193
P F++ L +E+ T VP + M D L R + S +K++ GG +
Sbjct: 255 PPGFDADLMLRLIEEERGTISGGVPTMLGRMLDSPALDRHDLS-----SWRKVMLGGAPV 309
Query: 194 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 253
P EL++ A ++ +G TE S +T + P+ H
Sbjct: 310 PPELVRRAQAR--GLTVVIGFGQTEASPYVT--------------------HTLPDDPHP 347
Query: 254 PQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
VG+P P E+K+ S +G I RG VM Y++ S +
Sbjct: 348 DWITTVGRPLPQTEIKIIDPDSGETLPRGRIGEICARGYSVMKDYFNDPQGTASAIDADG 407
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
WL TGD+GS+DD G + GRR I GGEN+YP E+E VL HP ++ VVGI +A
Sbjct: 408 WLHTGDLGSLDDYGYCRVQGRRRDLIIRGGENIYPREIEDVLHTHPAVLDASVVGIPDAD 467
Query: 368 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 427
E+ V V L+ + Q + D+ L Q CR + L +K PR WR
Sbjct: 468 WGEVPVGFVILKPNQQ---GDADE-------------LMQFCRAR-LASYKVPR---TWR 507
Query: 428 --KPFPLTSTGKIRRDEVRREVM 448
FP T++GKI++ ++R + +
Sbjct: 508 FVAQFPQTASGKIQKFKLRDDYL 530
>gi|229018347|ref|ZP_04175217.1| AMP-dependent synthetase and ligase [Bacillus cereus AH1273]
gi|229024576|ref|ZP_04181021.1| AMP-dependent synthetase and ligase [Bacillus cereus AH1272]
gi|228736641|gb|EEL87191.1| AMP-dependent synthetase and ligase [Bacillus cereus AH1272]
gi|228742936|gb|EEL93066.1| AMP-dependent synthetase and ligase [Bacillus cereus AH1273]
Length = 522
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 195/394 (49%), Gaps = 50/394 (12%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLS- 122
E I +TSGTTG+PKGV+++H A +VQS I + +DDV++ +APL HI G++
Sbjct: 168 EDLFCILYTSGTTGTPKGVMVTHRA-VVQSAQTIGTELHCTQDDVFIISAPLFHIFGMAI 226
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+ + + +G V KF + L+ +EQ VT VP + L K S
Sbjct: 227 NMLCAVAMGGRIVLQEKFRPRETLQLIEQEKVTIQKGVPTMFIKELELEDFDKY--DLSS 284
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ L G +P++ + E L ++G+TET S MT YD T +
Sbjct: 285 LRAGLVGAAPIPAKTVTEIRERM-GINLCQSFGITETVS--ITMTSYDDTNQ-------- 333
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFL 297
N+T +GK P V LK+ + VG I G VM Y++
Sbjct: 334 --NITET---------LGKAIPGVTLKIVDENRVALPPGEVGEIAVNGFGVMKGYYNMPE 382
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
V E W +GD+G++DD G + VGR+ I GG NVYP+E+EAV+++HP +I
Sbjct: 383 QTKQVLDNENWYYSGDLGTLDDQGYLRFVGRKKEMIIRGGLNVYPQEIEAVIMKHPKVIE 442
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
VVG+ + L E+ A +RL KN E+ E+ + + +E+ + +
Sbjct: 443 AAVVGLPDKVLGEVACAVIRL---------------KNGEVSTEEEI-KFYLKER-MAIY 485
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
K P V++ FP+T++GKI++ ++R +V S++
Sbjct: 486 KLPEK-VIFTNEFPVTASGKIQKLKLREQVSSNI 518
>gi|395536747|ref|XP_003770373.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Sarcophilus harrisii]
Length = 543
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 209/448 (46%), Gaps = 54/448 (12%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLP-FTHSWAPEGAVIICFT 73
L+ +P L + L S + D+L A K L L S + + I FT
Sbjct: 139 LRSKNLPELTTVIVLDSKLPGTFHMNDVLQAG--KTAQLAQLKDIQRSLSCHDPINIQFT 196
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVG-----YGEDDVYLHTAPLCH-IGGLSSAMAM 127
SGTTGSPKG +SH ++ ++ +G ++ + +PL H +G + M
Sbjct: 197 SGTTGSPKGATLSHHNIVNNAI----FIGERMNLRNKEPRLVLPSPLYHCLGSVGGTMVS 252
Query: 128 LMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVK 184
++ G + P FE K ALEAV Q T + P + D+ + + D +++
Sbjct: 253 ILYGVTLILSSPSFEGKRALEAVTQERATMIYGTPTMFVDMLN----QPDFSSYDISTLR 308
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P EL++ +++ AYG TE +S +TFM YD +E + G
Sbjct: 309 GGVIAGSPAPPELIRTIIQKMNLTEMVVAYGTTE-NSPVTFMNFYDDNIE---KKINTVG 364
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
+ P++ Q GK VE+ + G + RG VML YWD P +
Sbjct: 365 RIMPHTEAQILDPQTGK---QVEINM-------PGELCIRGYCVMLGYWDD----PEKTK 410
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
+ D DI ++D+ G +VGR I GGEN+YP E+E + P + VVG+
Sbjct: 411 DAIDEDKWDIAAVDEEGFCKIVGRSKDMIIRGGENIYPAELEDFFHKLPHVQEAQVVGVK 470
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ R+ E + AC+RL+ +++ ++ E L+ HC+ K L+ FK PR ++
Sbjct: 471 DERMGEEICACIRLKANYEGQ--------------ITPEELKAHCKGK-LSHFKIPR-YI 514
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMSHLK 452
++ K +PLT +GKI++ ++R + HLK
Sbjct: 515 VFVKGYPLTISGKIQKYKLREWMEKHLK 542
>gi|444430996|ref|ZP_21226167.1| putative fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
gi|443888045|dbj|GAC67888.1| putative fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
Length = 548
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 181/401 (45%), Gaps = 49/401 (12%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIG 119
+ AP+ A+ I +TSGTTG PKG +SH ++ +V Y DD P H
Sbjct: 182 QTLAPDDAINIQYTSGTTGFPKGATLSHRNILNNGYFVGELVHYTPDDRICVPVPFYHCF 241
Query: 120 GLSSAMAMLMVGACHVFIPK--FESKSALEAV-EQHCVTSLITVPAIMADLATLIRVKKT 176
G+ + A + IP F+ + L AV ++HC TSL VP + +A L T
Sbjct: 242 GMVMGNLAALTHAARIVIPAPAFDPAATLRAVADEHC-TSLYGVPTMF--IAMLNDPVLT 298
Query: 177 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
S++ + G P E MK+ ++ ++ YGMTETS
Sbjct: 299 DLDTSSLRTGIMAGSPCPIETMKQVIDTMGIEEISICYGMTETS---------------- 342
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVML 290
P + T +S+H+ + VG PH+E+ + + + G + TRG VML
Sbjct: 343 ---PVSAQTRTDDSIHR-RTATVGAAGPHIEISIVDPVTREILPRGEAGELCTRGYSVML 398
Query: 291 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 350
YW+Q + W+ TGDI +DD G + + GR + GGEN+YP E+E L+
Sbjct: 399 GYWEQPDKTAEAIDADRWMHTGDIAVMDDDGYLSITGRIKDMVIRGGENLYPREIEEFLI 458
Query: 351 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 410
HP + + V+G+ + + E ++A +++R L +R C
Sbjct: 459 THPDVQDVQVIGVPDEKYGEELMAWIQMRAG---------------TTALDVHTVRAFC- 502
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ L K PR +V FP+T TGK+R+ E+R + + L
Sbjct: 503 DGRLARHKIPR-YVHVVDAFPITITGKVRKVEMRAQAATML 542
>gi|407696003|ref|YP_006820791.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407253341|gb|AFT70448.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 518
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 178/387 (45%), Gaps = 51/387 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG PKGV++SH+ L + L A+ G V LH AP H+ G +
Sbjct: 163 VMYTGGTTGKPKGVMLSHTNLYIDGLGSQAVSGMPYRSVTLHAAPTFHVAGTGLILQATA 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKIL 187
V IP FE + L A++Q + VP ++ ++ + D S++ +L
Sbjct: 223 RLNTSVIIPMFEPLAVLRAIQQERILEAFLVPTMI----RMVLSHPDFAQYDLSSLQHLL 278
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G + S L+ A + P+A+ + AYGMTE S +++ +T P T
Sbjct: 279 YGASPIDSTLLNRAREALPQARFLQAYGMTELSPTVSILT---PDWHTE----------- 324
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 302
+ + G+P P VE+++ D + V G I+ RG VM YW+ KP
Sbjct: 325 -EGFRSGKMMSAGRPLPMVEMRIVDDNDNPVPAHTHGEIVVRGPVVMQGYWN----KPEQ 379
Query: 303 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ + W+ TGD G +D+ G V++V R I +GGENVY EVE +LQ P +
Sbjct: 380 TDDALRGGWMHTGDAGYMDEDGFVYVVDRIKDMIVTGGENVYSAEVEEAVLQLPQVAQCA 439
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+GI + E V A V L++ S D+ L HC+ + +K
Sbjct: 440 VIGIPDDDWGERVHAAVVLQDG---SALELDE-------------LMAHCKTL-IANYKI 482
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRRE 446
PR + R PL+ GK+ + ++R E
Sbjct: 483 PRSLEV-RSELPLSPAGKLLKYKLREE 508
>gi|118353816|ref|XP_001010173.1| AMP-binding enzyme family protein [Tetrahymena thermophila]
gi|89291940|gb|EAR89928.1| AMP-binding enzyme family protein [Tetrahymena thermophila SB210]
Length = 580
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 211/462 (45%), Gaps = 53/462 (11%)
Query: 6 ESSDSWYLELQHTAIPSLRWHVSLGSS-SSDFVNKRDMLTADILKGYSLRSLPFTHSWA- 63
E S + L+ +PSL++ + + + +N +D+L LK + ++L + A
Sbjct: 151 ELKTSKFGSLKSQRLPSLKYLIRIDDEVTPGMINYKDVLQMGGLKDF--KTLDRIMNIAS 208
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ A I FTSGTTG PKG ++H ++ S +GY E DV PL H G+
Sbjct: 209 PDDATNIQFTSGTTGLPKGATLTHFNILNNSFFIGNRLGYSEKDVICVPVPLYHCFGMVL 268
Query: 124 AMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+ V +P F +K A+E+V ++ TS+ VP + + +
Sbjct: 269 GNLCAINFGSTVVMPSEGFSAKKAMESVTKYKCTSIYGVPTMFLEYVKEYESNPSIYNYS 328
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
++KK + G P LM + + + + YG TE S + F T + +LE
Sbjct: 329 TLKKGVMSGALCPQALMSKLISEWDVPNIQICYGQTEVSP-IIFQTNQNDSLED------ 381
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQF 296
+ VG PH E+K+ + V G I RG VM +YW
Sbjct: 382 -------------KCTTVGTIFPHSEVKIINKKGHIVPIGESGEICIRGFGVMEKYWADR 428
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
A + W+ TGD+G ID+ G + +VGR I GGEN+YP+E+E L H I
Sbjct: 429 KATSKTIDQDQWIKTGDMGIIDERGYMKIVGRLKEMIIRGGENIYPKEIEEYLRSHRSIQ 488
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ V+G+ + + E A ++L++ DQ + K++ ++C+ + +
Sbjct: 489 DVQVLGVPDEKFGEETFALIKLKQ---------DQVLEGKDIF-------EYCKGQ-IAH 531
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRR----DEVRREVMSHLKSL 454
+K P+ +V + FPLT TGK ++ DE+++E+ + K+
Sbjct: 532 YKVPK-YVKFVNEFPLTVTGKPQKFKMLDELKKELQQNPKAF 572
>gi|269836393|ref|YP_003318621.1| AMP-dependent synthetase and ligase [Sphaerobacter thermophilus DSM
20745]
gi|269785656|gb|ACZ37799.1| AMP-dependent synthetase and ligase [Sphaerobacter thermophilus DSM
20745]
Length = 546
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 177/391 (45%), Gaps = 50/391 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAML 128
I +TSGTTG PKG +SH ++ + Y E+D P H G+ +A
Sbjct: 186 IQYTSGTTGFPKGATLSHHNILNNGFFIGEGLRYTENDRVCIPVPFYHCFGMVLGNLACT 245
Query: 129 MVGACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 186
GAC + +P ++ + LE V+ TSL VP + + L + + +++
Sbjct: 246 THGAC-IVVPGEAYDPVAVLEMVQAERCTSLYGVPTMF--IGELEHPRFSEFDLSTLRTG 302
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
+ G P E+MK + ++ YGMTETS T + DP + G
Sbjct: 303 IMAGSPCPVEVMKRVQSQMHMTEVAICYGMTETSPVSTQTAIDDPLEKRVGS-------- 354
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 300
VGK PH+E+K+ + + G + TRG VML YW+ A
Sbjct: 355 ------------VGKVHPHIEVKIIDPATGEIVPRGTPGELCTRGYSVMLGYWNNEEATR 402
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
W+ TGD+ ++DD G V +VGR I GGEN+YP EVE L HP + + V
Sbjct: 403 QAIDAARWMHTGDLATMDDEGYVNIVGRIKDMIIRGGENIYPREVEEFLYTHPAVADVQV 462
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ + R E V+A V+LRE Q ++ E L +CR + T +K P
Sbjct: 463 IGVPDERYGEEVMAWVKLREGAQ----------------VTGEELAAYCRGRIAT-YKIP 505
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
R + + FP+T TGKI++ +R + L
Sbjct: 506 RYW-KFTDTFPMTVTGKIQKFRMREMAIEEL 535
>gi|312199209|ref|YP_004019270.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
gi|311230545|gb|ADP83400.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
Length = 506
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 172/378 (45%), Gaps = 48/378 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AML 128
I FTSGTTG PKGV+++H + GE D YL P H GL + + A L
Sbjct: 174 IIFTSGTTGRPKGVMMNHRQTLRLYSEWTYQAQLGEGDRYLMINPYFHTFGLKAGLIASL 233
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKI 186
+ GA + F+ + E VE+ +T L P + L I + GRD S++
Sbjct: 234 IKGATMFPLAVFDVATVAEIVEREKITMLPGAPTVYQSLLEAIGSGQI-AGRDLSSLRCA 292
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
+ G +P EL++ P +++ YG+TE ++ T PG +F ++
Sbjct: 293 VTGSADIPVELIRRMKQELPFQHIMTGYGLTEAGTA---------TASRPGD---SFEDI 340
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 306
VG P +E+ + D +L RG VM Y++ A +
Sbjct: 341 A---------TTVGAPCDGIEVAIAGDS-----EVLIRGYSVMQGYFENPAATTDTIDAD 386
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
WL TGD+GS+DD G V ++GR+ GG N YP E+E LL+HP I V+G+ +A
Sbjct: 387 GWLHTGDLGSMDDRGYVKIIGRKKDMFIVGGFNAYPAEIEGYLLEHPAIAQAAVIGVPDA 446
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
R+ E+ A + R + + SK + + GFKAPR FV +
Sbjct: 447 RMGEVCKAFLVKRSGAEVTADEIIAWSKER-----------------MAGFKAPR-FVEF 488
Query: 427 RKPFPLTSTGKIRRDEVR 444
PL +TGK+ +D++R
Sbjct: 489 LDALPLNATGKVVKDQLR 506
>gi|345805217|ref|XP_537673.3| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Canis lupus familiaris]
Length = 642
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 190/403 (47%), Gaps = 70/403 (17%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLH-----------TAPLCH- 117
I FTSGTTG+PKG +SH ++ S ++G D + +H +PL H
Sbjct: 287 IQFTSGTTGNPKGATLSHYNIVNNS----NLIG---DRLKMHLKPPEEKRMILPSPLYHC 339
Query: 118 IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
+G + M +M G + P F K ALEA+ + + L P + D+ +
Sbjct: 340 LGSVGGTMVSVMYGTTLILSSPTFNGKKALEAISKERGSFLYGTPTMFVDILN----QPD 395
Query: 177 WKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 234
+ D +++ + G P EL++ + L+ AYG TE +S +TFM + T+E
Sbjct: 396 FSSYDISTIRGGVIAGSPAPPELIRTIIDKLNMKDLVVAYGTTE-NSPVTFMNFEEDTVE 454
Query: 235 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHV 288
+ VG+ PH E ++ + + ++ G + RG V
Sbjct: 455 QKAE-------------------TVGRILPHTEAQIVNMKTGNLVELNTPGELFIRGYCV 495
Query: 289 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 348
ML YW + + W TGDI +ID G +VGR I GGEN+YP E+E
Sbjct: 496 MLGYWGEPEKTKEAIGPDKWYRTGDIAAIDKQGFCKIVGRSKDMIIRGGENIYPAELEDF 555
Query: 349 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 408
+HP ++ + VVG+ +AR+ E + AC+RL++ + +E E ++
Sbjct: 556 FHKHPQVLEVQVVGVKDARMGEEICACIRLKKGEKTTE----------------EEIKAF 599
Query: 409 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
C+ K ++ FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 600 CKGK-ISHFKIPR-YIVFVTDYPLTVSGKIQKFKLREQMEQHL 640
>gi|407647404|ref|YP_006811163.1| AMP-binding domain protein [Nocardia brasiliensis ATCC 700358]
gi|407310288|gb|AFU04189.1| AMP-binding domain protein [Nocardia brasiliensis ATCC 700358]
Length = 541
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 173/396 (43%), Gaps = 48/396 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG +SH ++ + GY E D P H G+
Sbjct: 185 IQYTSGTTGFPKGATLSHHNILNNGFFVGELCGYTEQDRICVPVPFYHCFGMVMGNLAAT 244
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
A V IP F+ + L AVE TSL VP + +A L + S++ +
Sbjct: 245 SHAATVVIPAPAFDPVATLAAVEAERCTSLYGVPTMF--IALLTELDSATPDLSSLRTGI 302
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK + ++ YGMTETS ++ T D ++
Sbjct: 303 MAGSPCPVEVMKRVIDRMGMHEVCICYGMTETSP-VSTQTRRDDGIDR------------ 349
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPS 301
+ VG+ PH+E+K+ + G + TRG VML YW
Sbjct: 350 -------RTATVGRVGPHLEVKIVDPATGLTVPRGEPGELCTRGYSVMLGYWSDPGKTAE 402
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGDIG +DD G + + GR + GGEN+YP E+E L HP I+ V+
Sbjct: 403 AIDAARWMHTGDIGVMDDDGYLAITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVI 462
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E ++A VR+RE L + +R+ C K L FK PR
Sbjct: 463 GVPDPKYGEELMAWVRMREG---------------AAPLDATSVREFCTGK-LAHFKIPR 506
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 457
+V FP+T TGKIR+ E+ RE+ L +LP
Sbjct: 507 -YVHVVDEFPMTVTGKIRKAEM-RELSRALLALPDQ 540
>gi|194014794|ref|ZP_03053411.1| long-chain-fatty-acid--CoA ligase [Bacillus pumilus ATCC 7061]
gi|194013820|gb|EDW23385.1| long-chain-fatty-acid--CoA ligase [Bacillus pumilus ATCC 7061]
Length = 545
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 198/447 (44%), Gaps = 47/447 (10%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
E+ TA P L+ V +G + + D + A + P+ + + +T
Sbjct: 139 EITSTAFPYLKSVVYIGERTPKGMRSWDSIQAATKRTEDDEWEKRMEELTPDDVINMQYT 198
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGA 132
SGTTG PKGV++SH+ ++ + + +D P H G + +A L G
Sbjct: 199 SGTTGYPKGVMLSHTNIVCNASQIADCMKLTREDRMCIPVPFFHCFGSVLGVLACLAKGG 258
Query: 133 CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
+ I F + L+ VE+ T L VP + +A L +++ + G
Sbjct: 259 TIIPIESFHPERVLQTVEKEKCTVLHGVPTMF--IAELDHPNFHKYNLSTLRTGIMAGSL 316
Query: 193 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 252
PS +MK +L AYG TE+S +T T D + E Q
Sbjct: 317 CPSHVMKAVIEQMGLKELTIAYGQTESSPVIT-QTRTDDSFERRVQ-------------- 361
Query: 253 QPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGE 306
VG+ PH+E+K+ + G+ + G + TRG HVM Y+ A V +
Sbjct: 362 -----TVGRALPHIEVKITAPGTPYEVPRGEQGELCTRGYHVMKGYYKNEEATNEVIDED 416
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
WL TGD+ +D+ G V + GR I GGENVYP+E+E VL HP I+ VVGI +
Sbjct: 417 GWLHTGDLAEMDEDGYVIITGRLKDMIIRGGENVYPKEIEDVLYTHPAILDAQVVGIPDE 476
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
E A +RL++ ++ E L +C+ + + +K P+ F +
Sbjct: 477 TYGEEAAAFIRLKQGHA----------------VTIETLTSYCQSQ-MARYKIPKYFFIT 519
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHLKS 453
+ +P+T++GKI++ ++++ + +K
Sbjct: 520 DE-YPMTASGKIQKFRLKKQALDLIKE 545
>gi|407642609|ref|YP_006806368.1| putative 4-coumarate--CoA ligase 2 (4CL 2) (4-coumaroyl-CoA
synthase 2) [Nocardia brasiliensis ATCC 700358]
gi|407305493|gb|AFT99393.1| putative 4-coumarate--CoA ligase 2 (4CL 2) (4-coumaroyl-CoA
synthase 2) [Nocardia brasiliensis ATCC 700358]
Length = 515
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 180/392 (45%), Gaps = 64/392 (16%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAI----VGYGEDDVYLHTAPLCHIGGLSSAM 125
+ +T GTTG PKGV++SH +I+ +L A+ YG LH AP+ H+ ++ +
Sbjct: 163 VFYTGGTTGHPKGVMLSHDNMIISALGSCAVGDFVTPYG---TVLHVAPMFHLADIAMWV 219
Query: 126 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
A +V A HVF+P F L+A+ H VT+++ VP ++ L V V+
Sbjct: 220 AGNLVNASHVFVPMFTPGGVLQAIGAHGVTNMLLVPTMIQLLVDDPAVADF--DLSGVRT 277
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLY---DPTLETPGQLPQA 242
+ G + ++ A FP A AYGMTE + T + DP L
Sbjct: 278 VTYGASPISEAVLGRARKVFPMAGFTQAYGMTELAPVATLLGPAEHDDPVLRR------- 330
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFL 297
G+ PHVE+++ + V G ++ RG +VML YW+
Sbjct: 331 ---------------SAGRATPHVEVRIVDADDNEVPRGEVGEVVVRGDNVMLGYWN--- 372
Query: 298 AKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
+P + V W+ TGD G +D+ G V++V R I +GGENVY EVE L H
Sbjct: 373 -RPEDTAAAVRDGWMHTGDGGRMDEHGYVFIVDRLKDMIITGGENVYSAEVENALAAHAA 431
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ V+G+ + E V A V L Q +E E LR HC+ +
Sbjct: 432 VASCAVIGVPDDEWGERVHAVVVLLPGAQAAE----------------EELRAHCKSL-I 474
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
G+KAPR V + + P++ GKI + E+RR+
Sbjct: 475 AGYKAPRT-VEFAEALPVSGAGKILKRELRRK 505
>gi|441518306|ref|ZP_21000030.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
gi|441454840|dbj|GAC57991.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
Length = 507
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 178/400 (44%), Gaps = 84/400 (21%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIA---IVGYGEDDVYLHTAPLCHIGGLSSAMA 126
I +T GTTG PKGV++SH A + ++ + I+ G LH AP+ H+ L++
Sbjct: 163 IFYTGGTTGDPKGVMLSHRACLTSAMGALVTTDILTRGA--TLLHAAPMFHLADLAAWHV 220
Query: 127 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIM-----------ADLATLIRVKK 175
+ + HV +P F +EA+E+H V + VP ++ ADL++LI
Sbjct: 221 GCLTRSTHVIVPMFTPSGVIEAIERHRVVGALLVPTMIQMLVDSPEAADADLSSLIH--- 277
Query: 176 TWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL---YDPT 232
I+ G + L++ P+ +L AYGMTE + T +T DP
Sbjct: 278 ----------IIYGASPIAESLLERTFALLPEVRLTQAYGMTELAPIATLLTADDHLDPA 327
Query: 233 LETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAH 287
L G+PA H +L++ G VG I+ RG H
Sbjct: 328 LRR----------------------SCGRPAVHSDLRIVGADGQELGRGEVGEIIVRGDH 365
Query: 288 VMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEE 344
+M YW+ KP + V W+ TGD G +D G V+L R I +GGENVY E
Sbjct: 366 LMSGYWN----KPDATADAVRDGWMHTGDAGHMDANGYVFLADRLKDMIITGGENVYSVE 421
Query: 345 VEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEV 404
VE + +HPG+ V+G+ +A+ E V A V Q +E
Sbjct: 422 VENAIAKHPGVAQTAVIGVPDAQWGERVHAVVVRAPGAQVTEDE---------------- 465
Query: 405 LRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
LR+ CRE ++ +K PR V + + P++ GKI + +R
Sbjct: 466 LREFCRE-HIANYKLPR-SVAFIEELPVSGAGKILKRNLR 503
>gi|150014678|gb|ABR57200.1| Acs [Pseudomonas putida]
Length = 557
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 179/391 (45%), Gaps = 47/391 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG +SHS ++ +G E D + PL H G+ A M
Sbjct: 206 IQYTSGTTGFPKGATLSHSNILNNGYTVGESLGLTEHDRLVVPVPLYHCFGMVMANLGCM 265
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ P F+ + L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTLIYPNDAFDPLATLRAVAEEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 324 MAGATCPIEVMRRVIGEMHMAEVQIAYGMTETSP-VSLQTGPDDDLER---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E KV +DG++ +G + TRG VML YW+ A
Sbjct: 374 ----------SVGRTQPRLENKVVDADGNTVPRGEIGELCTRGYSVMLGYWNNLKATADS 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
E W+ TGD+ +D+ G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDAEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ ++ E +VA VRL SE E LR+ R + + FK PR
Sbjct: 484 VPCSKYGEEIVAWVRLHPGHTASE----------------EALREWARAR-IAHFKVPRY 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
F + FP+T TGK+++ +R ++ L S
Sbjct: 527 FRFVDE-FPMTVTGKVQKFRMREISVAELSS 556
>gi|421731485|ref|ZP_16170608.1| AMP-binding domain protein [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407073698|gb|EKE46688.1| AMP-binding domain protein [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 546
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 208/449 (46%), Gaps = 55/449 (12%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFT---HSWAPEGAVIIC 71
L+ P LR + +G S +++ D L + +G +L S + + +
Sbjct: 140 LRSKRYPFLRTVLYIGDKSPPGMHRWDSL---LKEGEALTDAALDGRMDSLKKDDCIHMQ 196
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLM 129
+TSGTTG PKGV++SH IV + A IA + D P H G + +A +
Sbjct: 197 YTSGTTGFPKGVMLSHFN-IVNNAANIAECMKLTSSDRLCIPVPFFHCFGCVLGVLACVS 255
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GA + I +F + L+ VEQ T+L VP + +A L + + V+ +
Sbjct: 256 AGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLHDSRFSEYDLSHVRTGIMA 313
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P+E+M+E + AYG TE S +T T D + E +
Sbjct: 314 GSPCPAEVMREVIGKMGMTDITIAYGQTEASPVIT-QTRTDDSFERRVE----------- 361
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 303
G+ PH+E+++ G+S G + TRG HVM Y+ A
Sbjct: 362 --------TAGRALPHIEVRIVRPGTSGEADRGEQGELCTRGYHVMKGYYKNQEATEEAI 413
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + + VVG+
Sbjct: 414 DKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGV 473
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E A VRL++ Q++ S+E +R C+E ++ +K PR +
Sbjct: 474 PDPKYGEEAAAWVRLKDG---------QTA-------SAEDIRTFCKE-HIARYKVPR-Y 515
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
VL+ +P+T++GKI++ ++R + + LK
Sbjct: 516 VLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|196247831|ref|ZP_03146533.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
gi|196212615|gb|EDY07372.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
Length = 539
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 201/429 (46%), Gaps = 52/429 (12%)
Query: 27 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 86
VS G+ SS + D+ + L S + P A + AV+ +T GTTG KG +++
Sbjct: 149 VSFGAPSSASLAAEDVTFDEFLAEGSGQVRPVPIEPAHDVAVL-QYTGGTTGRSKGAMLT 207
Query: 87 HSALIVQSLAKIAIV-GYGE--DDVYLHTAPLCHIGGLSSAMAMLMV-GACHVFIPKFES 142
H + L G E + YL PL H+ ++S M + + GA ++ +P+FE
Sbjct: 208 HRNIFANVLQCAEFFKGTFEMGKERYLTVIPLFHVFAMTSGMNLAIYQGAENILLPRFEL 267
Query: 143 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEAT 202
K LE + T VP + + V++ G S+K +G +P ELM++
Sbjct: 268 KEVLETIRDKQPTVFPGVPTMYVAITNTPGVEQY--GISSIKTCNSGSAPMPLELMRDFE 325
Query: 203 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 262
A ++ YG++E S +T +P P + +P V +G P
Sbjct: 326 EK-TGAVVLEGYGLSEASP----VTHCNP----------------PFAARKPGTVGIGMP 364
Query: 263 APHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 317
++ + G+ VG ++ RG VM YW+ + +V+ + WL TGD+ SI
Sbjct: 365 LTEYKVVDVATGTQELPPGEVGELIIRGPQVMKGYWN-MPEETAVTLRDGWLYTGDLASI 423
Query: 318 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 377
D+ G V +V R+ I +GG N+YP EVE VL +HP + VV+G+ ++ E V A +
Sbjct: 424 DEEGYVTIVDRKKDMIIAGGYNIYPREVEEVLYEHPAVKEAVVIGVPDSYRGETVKAVIV 483
Query: 378 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 437
L++ Q SE + + +HCR KNL +K PR+ V +R P T+ GK
Sbjct: 484 LKDGQQASEDD----------------IIRHCR-KNLASYKVPRI-VEFRTELPKTNVGK 525
Query: 438 IRRDEVRRE 446
I R +R E
Sbjct: 526 ILRRALREE 534
>gi|154686271|ref|YP_001421432.1| AMP-binding protein [Bacillus amyloliquefaciens FZB42]
gi|42491132|emb|CAE11269.1| YngI protein [Bacillus amyloliquefaciens FZB42]
gi|154352122|gb|ABS74201.1| YngI [Bacillus amyloliquefaciens FZB42]
Length = 546
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 185/389 (47%), Gaps = 49/389 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLM 129
+TSGTTG PKGV++SH IV + A IA + D P H G + +A +
Sbjct: 197 YTSGTTGFPKGVMLSHFN-IVNNAANIAECMKLTSSDRLCIPVPFFHCFGCVLGVLACVS 255
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GA + I +F + L+ VEQ T+L VP + +A L + + V+ +
Sbjct: 256 AGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLNDSRFSEYDLSHVRTGIMA 313
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P+E+M+E + AYG TE S +T T D + E +
Sbjct: 314 GSPCPAEVMREVIGKMGMTDITIAYGQTEASPVIT-QTRTDDSFERRVE----------- 361
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 303
G+ PH+E+++ G+S G + TRG HVM Y+ A
Sbjct: 362 --------TAGRALPHIEVRIVRPGTSGEAARGEQGELCTRGYHVMKGYYKNQEATEEAI 413
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + + VVG+
Sbjct: 414 DKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGV 473
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E A VRL++ Q++ S+E +R C+E ++ +K PR +
Sbjct: 474 PDPKYGEEAAAWVRLKDG---------QTA-------SAEDIRTFCKE-HIARYKVPR-Y 515
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
VL+ +P+T++GKI++ ++R + + LK
Sbjct: 516 VLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|308173824|ref|YP_003920529.1| short-chain acyl-CoA synthetase [Bacillus amyloliquefaciens DSM 7]
gi|307606688|emb|CBI43059.1| short-chain acyl-CoA synthetase [Bacillus amyloliquefaciens DSM 7]
Length = 449
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 182/389 (46%), Gaps = 49/389 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLM 129
+TSGTTG PKGV++SH IV + A IA + D P H G + +A +
Sbjct: 100 YTSGTTGFPKGVMLSHFN-IVNNAANIAECMKLTSSDRLCIPVPFFHCFGCVLGVLACVS 158
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GA + I +F S L+ VEQ T+L VP + +A L + V+ +
Sbjct: 159 AGAAMIPIEQFSPPSVLKTVEQEACTALHGVPTMF--IALLHDSGFSDYDLSHVRTGIMA 216
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P+E+M+E + AYG TE S +T DP
Sbjct: 217 GSPCPAEVMREVIGKMGMTDITIAYGQTEASPVITQTRTDDP------------------ 258
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVS 303
+ + G+ PH+E+ + G+S G + TRG HVM Y+ A
Sbjct: 259 --FERRVETAGRALPHIEVGIVRPGTSEEAARGEQGELCTRGYHVMKGYYKNQEATEEAI 316
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + + VVG+
Sbjct: 317 DKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGV 376
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E A +RL++ Q++ S+E +R C+E N+ +K PR +
Sbjct: 377 PDPKYGEEAAAWIRLKDG---------QTA-------SAEDIRTFCKE-NIARYKVPR-Y 418
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
VL+ +P+T++GKI++ ++R + + LK
Sbjct: 419 VLFTDEYPMTASGKIQKFKLREKTIEELK 447
>gi|126436701|ref|YP_001072392.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
gi|126236501|gb|ABN99901.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
Length = 497
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 188/401 (46%), Gaps = 43/401 (10%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 116
P P+ ++ FTSGTT PK V ++H+ L + D L P
Sbjct: 131 PVVEFADPDDVAVVLFTSGTTSRPKAVELTHNNLTSYVTGTVEFASADPADAALVCVPPY 190
Query: 117 HIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
HI G+ +A++ L G V++ +F+ + + V VT+ VP ++ + ++ +
Sbjct: 191 HIAGVGAALSNLYAGRTIVYLRRFDPREWVRLVRTEKVTTATVVPTMLDRIVAVLEEEPV 250
Query: 177 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
S++ GG + L+++A + P+ ++AYG+TETSS++ +T D L
Sbjct: 251 EL--PSLRNFAYGGSKVAQPLVRKALDLLPQVGFVNAYGLTETSSTIAVLTPEDHRLAH- 307
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLR 291
G +A + VG+P P +E+++ ++ G + G + RG V R
Sbjct: 308 GARDEAVAR---------RLSSVGRPVPGIEVQIRAEDGTVLGPNETGELFVRGPQVSGR 358
Query: 292 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
Y + SV E W T DI ++DD G +++ GR + I GGEN+ P E+E VL++
Sbjct: 359 YAEIG----SVLDAEGWFPTRDIATLDDDGYLFIGGRSDDTIIRGGENIAPSEIEEVLVE 414
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
HP + +VVVG+ + +++VA V E + +E LR R
Sbjct: 415 HPHVREVVVVGMDDPEWGQIIVAVV-------VPEPGAEP---------MAEELRDFAR- 457
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
K L G + P V +R P T+TGK+ +RRE++ LK
Sbjct: 458 KTLRGSRTPDRIV-FRDQVPTTATGKV----LRREILDDLK 493
>gi|46199401|ref|YP_005068.1| long-chain-fatty-acid-CoA ligase [Thermus thermophilus HB27]
gi|46197026|gb|AAS81441.1| long-chain-fatty-acid-CoA ligase [Thermus thermophilus HB27]
Length = 560
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 186/400 (46%), Gaps = 58/400 (14%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA-------IVGYGEDDVYLHT 112
H PE ++ +T GTTG KG +++H L+ L A +VG G V L
Sbjct: 200 HVPDPEDLALLQYTGGTTGLSKGAMLTHKNLVANVLQIDAWDPTSKDLVGKG---VMLGA 256
Query: 113 APLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLI 171
P H+ G++ AM L G V +P+ E K+ +EA+E+H VT VP +
Sbjct: 257 LPFFHVYGMTVAMNYGLFSGYKIVLLPRPEIKAIVEAIEKHQVTHFPGVPTLYVAFNNFP 316
Query: 172 RVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 231
++K + S++ L+G LP E+ K A+LI YG++E S +T +P
Sbjct: 317 GIEK--RNVKSIRICLSGAAPLPVEVAKR-FEELTGARLIEGYGLSEASP----VTHSNP 369
Query: 232 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGA 286
L G + S+ G P P V+ KV + VG + +G
Sbjct: 370 VL----------GLIKKGSI--------GMPFPSVDAKVVDEEGKELPPGEVGELAVKGP 411
Query: 287 HVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 346
+VM YW++ + + + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE
Sbjct: 412 NVMKGYWNR-PEETQKTLKDGWLFTGDLAKMDEDGYFYIVDRKKDMIIAGGYNIYPREVE 470
Query: 347 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 406
VL QH + VVG+ + E V A + L+ +Q S D +
Sbjct: 471 EVLYQHEAVQEAAVVGVPDPYRGETVAAFLVLKPEYQGKVSEKD--------------IE 516
Query: 407 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
+ CR+ NL +K PR+ + +R+ P +S GKI R E+R E
Sbjct: 517 RFCRQ-NLAAYKVPRI-IQFRESLPKSSVGKILRRELREE 554
>gi|357039287|ref|ZP_09101081.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355358186|gb|EHG05954.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 547
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 203/447 (45%), Gaps = 51/447 (11%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-SDFVNKRDMLT-ADILKGYSLRSLPFTHSWAPEGAVIIC 71
EL+ +P L+ + +G + N D++T AD + L P+ V +
Sbjct: 141 ELKSQRLPKLKNVIYIGEENYPGMFNWNDIMTMADHVSEEELEKR--QEDAKPDDVVNMQ 198
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMV 130
+TSGTTG PKGV+++H LI +++ + + +D P H G + + +
Sbjct: 199 YTSGTTGFPKGVMLTHINLIGNAVSMAECLNFSSEDRLCIPVPFFHCFGCVIGTLVCAVT 258
Query: 131 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
GA V + KF+ LE VE T++ VP + +A L +K S++ + G
Sbjct: 259 GAAMVPVEKFDPAKVLETVEVEKCTAVHGVPTMF--IAELEEMKNKKYNTASLRTGVMAG 316
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P+E+MK N+ +++ YG TE S +T DP
Sbjct: 317 APCPTEVMKAVVNTMGASEICITYGQTEASPGITMTRTDDPI------------------ 358
Query: 251 VHQPQGVCVGKPAPHVELKVCS-DGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVST 304
+ + VG+ P+VE+KV D V G + TRG HVM Y++ A S
Sbjct: 359 --ELRVSSVGRALPNVEVKVVDPDTGREVPPGIQGELCTRGYHVMKGYYNMPEATESAID 416
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
+ WL TGD+ +D+ G + GR I GGEN+YP E+E L H + + +VG+
Sbjct: 417 KDNWLHTGDLAIMDENGYCKITGRLKDMIIRGGENIYPREIEEFLYTHTKVRDVQIVGVP 476
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ + E V A ++L+ D +S + E ++ C K ++ FK P+ F+
Sbjct: 477 SQKYGEEVAAFIQLK----------DGTSA------TVEEFKEFCTGK-ISRFKIPKFFI 519
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ +P T++GKI++ +R + + L
Sbjct: 520 FVDE-YPTTASGKIQKFRLREQALEAL 545
>gi|404213877|ref|YP_006668071.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Gordonia
sp. KTR9]
gi|403644676|gb|AFR47916.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Gordonia
sp. KTR9]
Length = 547
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 200/465 (43%), Gaps = 55/465 (11%)
Query: 1 MLVTDESSDSWYLELQHTA---IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLP 57
+L D DS Y + A P LR V GS ++ D L + R
Sbjct: 126 VLAADSFKDSAYASMLAQARPRCPELREVVLFGS------DEWDALCVEASAEELERVSE 179
Query: 58 FTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH 117
S +P+ + I +TSGTTG PKG +SH + ++ Y DD P H
Sbjct: 180 VAASLSPDDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGELLNYTADDRICLPVPFYH 239
Query: 118 -IGGLSSAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK 175
G + +A GA V P F+ ++ LEAV ++ TSL VP + +
Sbjct: 240 CFGMVMGNLAATSHGAAMVIPAPAFDPRATLEAVAEYRCTSLYGVPTMFI-AELGLLDDG 298
Query: 176 TWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
S++ + G P +M++ + ++ YGMTETS T + DP
Sbjct: 299 LDVDLSSLRTGIMAGSPCPEYVMRQVVDRMHMREVSICYGMTETSPVSTQTRVDDPL--- 355
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC------SDGSSHVGRILTRGAHVM 289
+ + VG+ PH+E+K+ + G G + TRG VM
Sbjct: 356 -----------------ELRVTTVGRVGPHLEIKIVDPGTGETSGRGETGELCTRGYSVM 398
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
YW++ + W+ TGD+ +DD G V + GR + GGEN+YP E+E L
Sbjct: 399 TGYWNEPEKTAEAIDADGWMHTGDLADMDDNGYVRITGRIKDMVIRGGENIYPREIEEFL 458
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
HP I+ V+G+ + + E ++A VRLR+S +++ LR+
Sbjct: 459 YTHPDILDAQVIGVPDEKYGEELMAWVRLRDSASG---------------FTADDLREFA 503
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
K + K PR +V + FP+T TGK+R+ +R E +S L+ L
Sbjct: 504 TGK-IARHKIPR-YVHVVEEFPMTVTGKVRKVAMRDEAVSILEQL 546
>gi|408678782|ref|YP_006878609.1| Long-chain-fatty-acid--CoA ligase [Streptomyces venezuelae ATCC
10712]
gi|328883111|emb|CCA56350.1| Long-chain-fatty-acid--CoA ligase [Streptomyces venezuelae ATCC
10712]
Length = 616
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 175/396 (44%), Gaps = 52/396 (13%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSL-----------AKIAIVGYGEDDVYLHT 112
PE I +TSGTTG PKG V +H A ++ A+ + G G V L T
Sbjct: 247 PEHDATIIYTSGTTGRPKGAVATHRAQAGAAMNPRYFAAAAALARGEVPGTGPAPVSLTT 306
Query: 113 APLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR 172
P H+ +S A++ G V + K+++ ALE + +H VT VP L L R
Sbjct: 307 FPFFHVAAFTSFYAVMAAGGTLVMMRKWDAGRALELIREHRVTHYAGVPTTALQLLDLAR 366
Query: 173 VKKTWKGRDSVKKILNGGGGLPSELMKEATNSF-PKAKLISAYGMTETSSSLTFMTLYDP 231
T G DS+ + GG P ++ T + + + + YG+TETS +
Sbjct: 367 A--TGDGLDSLTLLSTGGAAAPPGIVAGITAGYGERLEPRNGYGLTETSGGV-------- 416
Query: 232 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLR 291
NV P VG+P+P E+++ + G+ VG + RG ++
Sbjct: 417 -----------LSNVGAEYRAHPG--SVGRPSPVTEVRIEAPGAEGVGELWLRGQSLVRG 463
Query: 292 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
YW A + T + W TGD+ +D GG V +V R + GGENVY EVE VL Q
Sbjct: 464 YWGNEEATRAAFTEDGWFRTGDLARVDAGGRVSIVDRLTDMVIRGGENVYCVEVEGVLQQ 523
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
HP ++ V+G+ + L E V A VRLR + E LR H
Sbjct: 524 HPDVVDAAVLGVPHPLLGEEVAAVVRLRPG----------------AAVGVEELRAHVGA 567
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 447
+ L FK P ++ + P TGKI + ++R +V
Sbjct: 568 R-LAAFKVPAHVLVREEELPRNPTGKILKRQLRDDV 602
>gi|375266073|ref|YP_005023516.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. EJY3]
gi|369841394|gb|AEX22538.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. EJY3]
Length = 512
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 191/412 (46%), Gaps = 65/412 (15%)
Query: 53 LRSLPFTHSWAPEGA---VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVY 109
+R + + P A ++ +TSGTTG PKG ++ +++ ++ I+ DDV+
Sbjct: 152 IRDVEPLSDYVPRNADDTCVVLYTSGTTGMPKGAELTQQNIVMNAIVGQNIMAAQGDDVH 211
Query: 110 LHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLA 168
L T PL H G + + A ++ GA V +P+FE LE +E+H VT VP + +
Sbjct: 212 LVTLPLFHTFGQTVHLNASVLSGATLVLVPRFEPSHVLELIEKHKVTIFAGVPTMYIGM- 270
Query: 169 TLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL 228
+ + S++ +GG LP+E+ + F ++ YG++ETS F L
Sbjct: 271 --LHADADYD-ISSLRVAASGGSSLPTEVFRAFEEKF-NVPILEGYGLSETSPIACFNHL 326
Query: 229 YDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILT 283
+ PG VG+P VE+K+ + V G I+
Sbjct: 327 DQERI--PG--------------------SVGQPIQGVEVKLVDLEGNQVPVGEEGEIIV 364
Query: 284 RGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENV 340
RG +VM Y L +P V+ + W TGD+G D+ GN+++V R I GG NV
Sbjct: 365 RGHNVMKGY----LGRPEVTESVLKNGWFHTGDVGRFDEAGNLYIVDRIKDLIIRGGFNV 420
Query: 341 YPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLL 400
YP E+E V + HP + + V+GI + E + A V L+ DQ + +L
Sbjct: 421 YPREIEEVFMTHPAVAMVAVIGIPHQEYGEEIKAYVVLKP---------DQDLEAADL-- 469
Query: 401 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
Q ++L FK PR FV R P+++TGKI ++RE+ S LK
Sbjct: 470 ------QAWGREHLAAFKYPR-FVEIRDQLPMSATGKI----LKRELKSELK 510
>gi|47568327|ref|ZP_00239029.1| fadD13 [Bacillus cereus G9241]
gi|47555020|gb|EAL13369.1| fadD13 [Bacillus cereus G9241]
Length = 496
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 184/393 (46%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQDNMFWNALNNTFAIDLTIHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE +AL +E+H VT ++ VP I L + + T SV+
Sbjct: 210 FPTLFAGGVIIVPRKFEPTTALSMIEKHKVTVVMGVPTIHQALVNCEKFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E N + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFIN---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP + + + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCDYVLIDENKNKVEIGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
K ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TKETIQDG--WLYTGDLARVDEEGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG R+ +W E+ K +L+ + + +HCR L +
Sbjct: 422 VAVVG----------------RQHVKWGETPIAFIVKKSSSVLTEKEVIEHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ +++ K P +TGKI++ ++ ++ S
Sbjct: 465 KIPKE-IIFLKELPKNATGKIQKVQLANQLKSR 496
>gi|408681796|ref|YP_006881623.1| acetoacetyl-CoA synthetase or Long-chain-fatty-acid--CoA ligase
[Streptomyces venezuelae ATCC 10712]
gi|328886125|emb|CCA59364.1| acetoacetyl-CoA synthetase or Long-chain-fatty-acid--CoA ligase
[Streptomyces venezuelae ATCC 10712]
Length = 534
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 175/386 (45%), Gaps = 47/386 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MA 126
V I +TSGTTG PKG +SH ++ ++ Y E D P H G+ +A
Sbjct: 182 VNIQYTSGTTGFPKGATLSHHNILNNGYFVGEMIAYSEQDRICIPVPFYHCFGMVMGNLA 241
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
GAC V P F+ + L AV++ TSL VP + +A L S++
Sbjct: 242 ATSHGACMVIPAPSFDPAATLRAVQEERCTSLYGVPTMF--IAELNLPDFGTYDLSSLRT 299
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+MK A++ YGMTETS T T D LE
Sbjct: 300 GIMAGSPCPVEVMKRVVAEMNMAEVSICYGMTETSPVST-QTRRDDDLER---------- 348
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAK 299
+ VG+ PHVE+KV + G + TRG VML YWD+
Sbjct: 349 ---------RTGTVGRVMPHVEVKVVDPATGLTVARGTAGELCTRGYSVMLGYWDEPEKT 399
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
W+ TGD+ ++ D G V +VGR I GGENVYP E+E L HPGI +
Sbjct: 400 GEAIDAGRWMHTGDLATMRDDGYVQIVGRIKDMIIRGGENVYPREIEEFLHGHPGIADVQ 459
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VVG+ + R E ++ACV R D ++ + E + CR++ L +K
Sbjct: 460 VVGVPDERYGEEILACVIPR----------DPAAPP-----TLEDVTAFCRDR-LAHYKI 503
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRR 445
PR + + FP+T +GK+R+ E+R+
Sbjct: 504 PRRLEILTE-FPMTVSGKVRKVELRQ 528
>gi|15613694|ref|NP_241997.1| AMP-binding domain protein [Bacillus halodurans C-125]
gi|10173747|dbj|BAB04850.1| long-chain fatty-acid-CoA ligase [Bacillus halodurans C-125]
Length = 546
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 209/475 (44%), Gaps = 77/475 (16%)
Query: 1 MLVTDESSDSWYLELQHTAIPSL----------------RWHVSLGSSS-------SDFV 37
+L+ D D+ Y+E+ + +P L R + LG D +
Sbjct: 110 LLLIDGYRDASYVEMLYEILPELKTSEPGACYSKKLPHLRRVIHLGEERYPGMYTWEDVL 169
Query: 38 NKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAK 97
N +T D L S S P+ + + +TSGTTG PKGV+++H+ ++ +
Sbjct: 170 NLGTEVTNDELAERSA-------SLDPDDVINMQYTSGTTGFPKGVMLTHNNIVNNARNI 222
Query: 98 IAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTS 156
+ +D P H G + +A + VGA V + +F L+AVE T
Sbjct: 223 AECMKLTNEDRLCIPVPFFHCFGCVLGTLACVSVGATMVPVQEFNPTRVLQAVEAEKCTG 282
Query: 157 LITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGM 216
L VP + +A L ++ + G P E+MK A + + AYG
Sbjct: 283 LHGVPTMF--IAELNDEDFMNYNLSHLRTGIMAGSNCPIEVMKAAIEKMGMSDITIAYGQ 340
Query: 217 TETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS 276
TETS +T + DP +E Q VG+P P+VE+K+ G+
Sbjct: 341 TETSPVITQTRVDDP-IELRVQ-------------------TVGRPLPNVEVKIVEPGTE 380
Query: 277 H------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRN 330
G + TRG HVM Y+ A V + WL TGD+ +D+ G + GR
Sbjct: 381 KEVAPGVQGELCTRGYHVMKGYYKNQQATREVIKEDGWLHTGDLAVMDEAGYCRITGRLK 440
Query: 331 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 390
I GGEN+YP E+E L QHP I+ VVG+ + + E V A ++L+
Sbjct: 441 DMIIRGGENIYPREIEEFLYQHPDILDAQVVGVPDEKYGEAVSAWIKLKPG--------- 491
Query: 391 QSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
+ ++SE +R C+ K + +K PR ++ + +P+T++GK+++ ++R+
Sbjct: 492 -------VSVTSEEIRDFCQGK-VAHYKIPR-YIEFVDDYPMTASGKVQKFKLRQ 537
>gi|384265593|ref|YP_005421300.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387898579|ref|YP_006328875.1| AMP-binding protein [Bacillus amyloliquefaciens Y2]
gi|380498946|emb|CCG49984.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387172689|gb|AFJ62150.1| AMP-binding domain protein [Bacillus amyloliquefaciens Y2]
Length = 546
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 206/446 (46%), Gaps = 49/446 (10%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 74
L+ P LR + +G S +++ D L D S + + + +TS
Sbjct: 140 LRSKRYPFLRTVLYIGDKSPPGMHRWDSLLKDAESVTDAELDGRMDSLKKDDCIHMQYTS 199
Query: 75 GTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGA 132
GTTG PKGV++SH IV + A IA + D P H G + +A + GA
Sbjct: 200 GTTGFPKGVMLSHFN-IVNNAANIAECMKLTSCDRLCIPVPFFHCFGCVLGVLACVSAGA 258
Query: 133 CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
+ I +F + L+ VE+ T+L VP + +A L + + V+ + G
Sbjct: 259 AMIPIEQFSPPAVLKTVEKEACTALHGVPTMF--IALLNDSRFSEYDLSHVRTGIMAGSP 316
Query: 193 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 252
P+E+M+E + AYG TE S +T T D + E +
Sbjct: 317 CPAEVMREVIGKMGMTDITIAYGQTEASPVIT-QTRTDDSFERRVE-------------- 361
Query: 253 QPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGE 306
G+ PH+E+++ G+S G + TRG HVM Y+ A + +
Sbjct: 362 -----TAGRALPHIEVRIVRPGTSQEAARGEQGELCTRGYHVMKGYYKNQEATEAAIDKD 416
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + + VVG+ +
Sbjct: 417 GWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDP 476
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E A +RL++ Q++ S+E +R C+E ++ +K PR +VL+
Sbjct: 477 KYGEEAAAWIRLKDG---------QTA-------SAEDIRAFCKE-HIARYKVPR-YVLF 518
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHLK 452
+P+T++GKI++ ++R++ + LK
Sbjct: 519 TDEYPMTASGKIQKFKLRKKTIEELK 544
>gi|375362485|ref|YP_005130524.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|371568479|emb|CCF05329.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
Length = 546
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 185/389 (47%), Gaps = 49/389 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLM 129
+TSGTTG PKGV++SH IV + A IA + D P H G + +A +
Sbjct: 197 YTSGTTGFPKGVMLSHFN-IVNNAANIAECMKLTSSDRLCIPVPFFHCFGCVLGVLACVS 255
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GA + I +F + L+ VEQ T+L VP + +A L + + V+ +
Sbjct: 256 AGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLNDSRFSEYDLSHVRTGIMA 313
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P+E+M+E + AYG TE S +T T D + E +
Sbjct: 314 GSPCPAEVMREVIGKMGMTGITIAYGQTEASPVIT-QTRTDDSFERRVE----------- 361
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVS 303
G+ PH+E+++ G+S G + TRG HVM Y+ A
Sbjct: 362 --------TAGRALPHIEVRIVRPGTSQEAARGEQGELCTRGYHVMKGYYKNQEATEEAI 413
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + + VVG+
Sbjct: 414 DKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGV 473
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E A VRL++ Q++ S+E +R C+E ++ +K PR +
Sbjct: 474 PDPKYGEEAAAWVRLKDG---------QTA-------SAEDIRTFCKE-HIARYKVPR-Y 515
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
VL+ +P+T++GKI++ ++R + + LK
Sbjct: 516 VLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|313213478|emb|CBY40446.1| unnamed protein product [Oikopleura dioica]
Length = 540
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 184/395 (46%), Gaps = 52/395 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALI---VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM 125
+I FTSGTTGSPKG +SH ++ +QS + ++ EDDV L P H G A
Sbjct: 184 LIKFTSGTTGSPKGATLSHHNILNNAMQSSSSERLLT-TEDDVILVNTPFYHCFGCVMAN 242
Query: 126 AMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
++ C + IP F ++ L+A + T P + DL R ++ +
Sbjct: 243 LFMLTRGCKLVIPAPTFNAEVGLDAAQAEGATVWYGTPTMFVDLLASPRRSSFVAPQEGI 302
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ ++ G P +L+++ + K+ AYG TE +S +TFMT
Sbjct: 303 RGLM-AGSICPEQLLRDLDQHY-NCKVFVAYGTTE-NSPITFMT---------------- 343
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 297
T S + + VG PH E K+ G + RG V Y+++
Sbjct: 344 ---TNESTFKQRTTTVGCVMPHTEAKLVDTEHGKTVEMGEKGEMCIRGPCVFKGYFNEPE 400
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
V + W TGD+ ++D+ G V +VGR I GGEN+YP EVE+ LL+HP ++
Sbjct: 401 KTAEVVDEDGWYHTGDLATMDESGYVKIVGRAKDMIIRGGENIYPAEVESFLLKHPAVVD 460
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
VVG+ + RL E V A VRL + L+++ L+Q+ E N+T +
Sbjct: 461 AQVVGVPSKRLGEEVAAYVRLASGAE----------------LTADELKQYGFE-NMTHW 503
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
K P+ ++ + +PLT TGKIR+ E+R + K
Sbjct: 504 KVPK-YIKVVEEYPLTVTGKIRKVELREYAKNDFK 537
>gi|228985053|ref|ZP_04145221.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228774741|gb|EEM23139.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 496
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 183/393 (46%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQDNMFWNALNNTFAIDLTIHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE +AL +E+H VT ++ VP I L + T SV+
Sbjct: 210 FPTLFAGGVIIVPRKFEPTTALSMIEKHKVTVVMGVPTIHQALVNCENFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E N + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFIN---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP + + + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCDYVLIDENKNKVEIGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
K ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TKETIQDG--WLYTGDLARVDEEGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG R+ +W E+ K +L+ + + +HCR L +
Sbjct: 422 VAVVG----------------RQHVKWGETPIAFIVKKSNSVLTEKEVIEHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ +++ K P +TGKI++ ++ ++ S
Sbjct: 465 KIPKE-IIFLKELPKNATGKIQKAQLANQLKSR 496
>gi|152988530|ref|YP_001348039.1| AMP-binding protein [Pseudomonas aeruginosa PA7]
gi|150963688|gb|ABR85713.1| acyl-CoA synthase [Pseudomonas aeruginosa PA7]
Length = 561
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 205/455 (45%), Gaps = 59/455 (12%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-SDFVNKRDML-TADILKGYSLR----SLPFTHSWAPEGA 67
EL +P LR VSL + + F++ + + A+ + LR SL F
Sbjct: 150 ELASERLPELRGVVSLAERAPAGFLHWQGLPGLAEAVGAEELRQRQASLQFDEP------ 203
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMA 126
+ I +TSGTTG PKG +SH ++ +G G D + PL H G + +
Sbjct: 204 INIQYTSGTTGFPKGATLSHYNILNNGYLVGESLGLGAQDRLVIPVPLYHCFGMVMGNLG 263
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ G+ ++ P F++++ L AV + T+L VP + +A L ++ S++
Sbjct: 264 CVTHGSTMIYPAPSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRGEFDLSSLRT 321
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+M+ + A++ AYGMTETS ++ T D LE
Sbjct: 322 GIMAGATCPIEVMRRVIDEMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------R 371
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKP 300
VT VG+ P +E K+ +G + TRG VML YW+ A
Sbjct: 372 VT----------TVGRTQPRLESKIVDQQGRVVPRGEIGELCTRGYSVMLGYWNDPQATA 421
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
W+ TGD+ +DD G V +VGR I GGEN+YP E+E HP + + V
Sbjct: 422 EAIDPARWMHTGDLALMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQV 481
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+GI + R E +VA ++L + + E LR C+E+ + FK P
Sbjct: 482 IGIPDERYGEEIVAWIKLHPGHRADD----------------EQLRAFCKER-IAHFKVP 524
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLP 455
R F + FP+T TGKI++ +R + ++ LP
Sbjct: 525 RHFKFVDE-FPMTVTGKIQKFRMREVSIQEVRLLP 558
>gi|89097499|ref|ZP_01170388.1| acyl-CoA synthase [Bacillus sp. NRRL B-14911]
gi|89087795|gb|EAR66907.1| acyl-CoA synthase [Bacillus sp. NRRL B-14911]
Length = 586
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 187/393 (47%), Gaps = 53/393 (13%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLS 122
P+ + + +TSGTTG PKGV+++H+ +I + + G++D P H G +
Sbjct: 221 PDDVINMQYTSGTTGFPKGVMLTHANIINNAYHIAGCMELGKEDRLCIPVPFFHCFGCVL 280
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD 181
+A + VGA + + +F K L V+ T L VP + +A+L ++ G D
Sbjct: 281 GTLACVSVGATMLPVREFSPKEVLLTVQNEKCTGLHGVPTMFIAELN-----DPSFGGYD 335
Query: 182 --SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
S++ + G P E+MK A++ AYG TE+S +T DP
Sbjct: 336 LSSLRTGIMAGSNCPIEVMKAVIEKMGAAEITIAYGQTESSPVITQTRTDDPI------- 388
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYW 293
+ + VGK PHVE+K+ + G+SH G + TRG HVM Y+
Sbjct: 389 -------------ELRVESVGKALPHVEVKIVTPGTSHEVPRGTQGELCTRGYHVMKGYY 435
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
+ A E WL TGD+ +D+ G + GR + GGEN+YP E+E L HP
Sbjct: 436 NNPDATKEAIDSEGWLHTGDLAVMDENGYCSITGRLKDMVIRGGENIYPREIEEFLYTHP 495
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
++ + V G+ + E ++A + L+E + + K E LR CR K
Sbjct: 496 KVLDVQVTGVPDPVFGEELMAWIILKEG--------ETAGK--------EELRSFCRGK- 538
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
++ K PR F + K +P+T++GKI++ ++R +
Sbjct: 539 ISRHKIPRYFE-FVKEYPMTASGKIQKFKLREK 570
>gi|347751997|ref|YP_004859562.1| AMP-dependent synthetase/ligase [Bacillus coagulans 36D1]
gi|347584515|gb|AEP00782.1| AMP-dependent synthetase and ligase [Bacillus coagulans 36D1]
Length = 541
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 203/417 (48%), Gaps = 55/417 (13%)
Query: 52 SLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYL 110
S RS+ T A I +TSGTTG PKGV+I+H A +VQS IA ++ + D ++
Sbjct: 167 SYRSVQKTKIDADNDVFCILYTSGTTGKPKGVMITHRA-VVQSARTIASVLKCTDQDAFI 225
Query: 111 HTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT 169
+APL HI GL+ + + + GA + KF ++ L+ +EQ +T VP +
Sbjct: 226 ISAPLFHIFGLAINLVCAISAGARILLQEKFRAEQTLKLIEQESITVQQGVPTMFLKQLE 285
Query: 170 LIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTE--TSSSLTFMT 227
+ ++ S++ + G +P +KE +L ++G+TE T +S TF
Sbjct: 286 VENLENY--NLSSLRTGIVGASPIPPNKVKEIREKM-GMELNQSFGITEAVTVTSTTFED 342
Query: 228 LYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRIL 282
D LE +G+P P VELK+ +D V G I
Sbjct: 343 DEDKILE-----------------------ILGRPIPGVELKIVNDKRETVPHGVVGEIA 379
Query: 283 TRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYP 342
R VM Y+ V E W TGD+G +D+ G + VGR+ I GG N+YP
Sbjct: 380 VRSFAVMKGYYKMPEQTDQVLDSEGWFYTGDLGMLDEDGYLKFVGRKKEMIIRGGFNIYP 439
Query: 343 EEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSS 402
+E+EAVL +HP I+ V+G + L E+V A +RL+E ++C S
Sbjct: 440 QEIEAVLSKHPYILESAVIGFPDEVLGEIVCAVIRLKEG-----ADC-----------SE 483
Query: 403 EVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVM-SHLKSLPSNL 458
E + + +E + +K P+ +L+ + FP T++GKI++ +R +++ + ++S P +L
Sbjct: 484 EDILTYLKEW-IAIYKVPQR-ILFTQDFPTTASGKIQKVRLREQLLKTAVQSNPKSL 538
>gi|226361776|ref|YP_002779554.1| fatty-acid--CoA ligase [Rhodococcus opacus B4]
gi|226240261|dbj|BAH50609.1| putative fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 506
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 182/385 (47%), Gaps = 51/385 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV++SH L + A + LH AP+ H+ L+S + ++
Sbjct: 163 IFYTGGTTGFPKGVMLSHRNLFASATGCAATGAWSTAGRALHAAPMFHLADLASVIGHML 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
+G HV IP F+ + L A+ H VT + VP ++ T+ + S++ I+ G
Sbjct: 223 LGGTHVMIPAFDPVTTLTAIADHGVTDALLVPTMIQ--MTVDHPRLAEFDLSSLRHIMYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ L+ A +FP AK + YGMTE + + L+D P + A
Sbjct: 281 ASPISESLLDRARTAFPSAKFLQGYGMTELAPVASL--LHDEDHHHPIRRRSA------- 331
Query: 250 SVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVST 304
G+ APH +K+ DG+ H G I+ G HVML YW+ KP +
Sbjct: 332 ----------GRAAPHTLIKIVDPDGNEVPRGHFGEIIVTGDHVMLGYWN----KPDETA 377
Query: 305 GEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ W+ TGD G++D G V++ R I SGGENVY EVE VL +HP + V+
Sbjct: 378 AALRNGWMHTGDGGTMDGDGYVFVADRIKDMIISGGENVYSIEVENVLAKHPAVTQCAVI 437
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
+ + R E V A V L+ L+ + LR+H + + + G+K PR
Sbjct: 438 AVPDDRWGERVHAVVTLKPGTT----------------LTLDELREHSK-REIAGYKVPR 480
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRRE 446
+ FP++ GKI + E+R++
Sbjct: 481 SLEIV-DSFPMSGAGKILKRELRKQ 504
>gi|407698020|ref|YP_006822808.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407255358|gb|AFT72465.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 517
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 181/383 (47%), Gaps = 48/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG+PKGV++SH+ L S+ + G+ V LH+AP H+ G+ + + +
Sbjct: 163 ILYTGGTTGAPKGVMLSHANLYTCSIGAVMPACRGDGVVGLHSAPFFHVAGVGLILQLTL 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
HV +P+FE + + A+++ V VP +M A L + S++ ++ G
Sbjct: 223 RLGTHVIVPRFEEVAVMSAIQRERVVETFLVPTMMR--AVLAHPRFPEFDLSSLRCMMYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ S L+K+A ++P+A + YGMTE S + + Y +
Sbjct: 281 ASPIDSTLLKKAMTAWPEASFLQLYGMTELSPVVCILPDY----------------CHSD 324
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVST 304
+ + + G PA E++V + VG I+ RG VM YW+ KP +
Sbjct: 325 DAYADKLMAAGLPAHMAEVRVVDSEDNEVPRGQVGEIVARGPMVMQGYWN----KPEQTE 380
Query: 305 GEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ W+ TGD G +DD G ++LV R + +GGENVY EVE LL+ P I V+
Sbjct: 381 EALRQGWMHTGDAGYMDDAGYIFLVDRIKDMVVTGGENVYSVEVEDALLRMPAIAQCAVI 440
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E V A + L + +E++ + HC+ + +K PR
Sbjct: 441 GVPDEKWGERVHAVIVLAAGAEVAEAD----------------IVAHCKTL-IANYKCPR 483
Query: 422 LFVLWRKPFPLTSTGKIRRDEVR 444
F L + PL+ GKI + +++
Sbjct: 484 SFELVDQ-MPLSGAGKILKYKLK 505
>gi|384103622|ref|ZP_10004594.1| fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
gi|383838861|gb|EID78223.1| fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
Length = 514
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 184/392 (46%), Gaps = 56/392 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE----DDVYLHTAPLCHIGGLSSAM 125
+ +T GTTG+ K + SH +L S A + +GY D L AP+ HI L M
Sbjct: 158 LIYTGGTTGAAKAAMHSHRSL---STALLGSMGYARSSEPDGATLVMAPVFHIAALLGMM 214
Query: 126 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SV 183
A +VG VF +FE L+ + +H VT++ + P ++ L+ ++ D S+
Sbjct: 215 AQTLVGGTLVFANRFEPDEVLQLLGRHRVTTMTSTPGML----QLLYTHPSFPAADVTSL 270
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
I+ G +P ++ A +FP A+ + YGMTET+ +L T G
Sbjct: 271 TTIVYGAAPMPEAVLTRAMAAFPNAQFVQGYGMTETA---VIASLLGATHRLGG------ 321
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 298
P+ G+ HV++ + + + V G ILTRG ++ML YW++
Sbjct: 322 ----------PRLKSAGRATLHVQIIIADEDGNEVPRGAVGEILTRGDNIMLGYWNRPEE 371
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ G WL TGD+ +DD G +++V R I +GGENVY EVE VL HP ++
Sbjct: 372 TAAALRGG-WLHTGDLAYMDDEGYIFIVDRAKDMIITGGENVYSTEVENVLSHHPAVLRC 430
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+G+ + + E V A + Q + ++ E +R+H + + L GFK
Sbjct: 431 AVIGVPDEQWGERVHAII------------VPQPGQT----VAVEEIREHVKTR-LAGFK 473
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
APR L + T+TGKI + +R+ +
Sbjct: 474 APRTIELV-QALATTATGKIDKRALRQHTLEQ 504
>gi|389862540|ref|YP_006364780.1| short-chain acyl-CoA synthetase [Modestobacter marinus]
gi|388484743|emb|CCH86283.1| short-chain acyl-CoA synthetase [Modestobacter marinus]
Length = 551
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 178/397 (44%), Gaps = 47/397 (11%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
+P+ + I +TSGTTG PKG ++H L+ GY E D P H G+
Sbjct: 183 SPDDPINIQYTSGTTGFPKGATLTHHNLLNNGFFVGEGCGYTEADRVCIPVPYYHCFGMG 242
Query: 123 SA-MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ GA V P F+ + L+AV+ TSL VP + +A L +
Sbjct: 243 MGNLGCTSHGATMVIPAPGFDPAATLQAVQDERCTSLYGVPTMF--IAELALPGFSSYDL 300
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
S++ + G P E+MK + ++ YGMTETS T T D L+
Sbjct: 301 SSLRTGIMAGSPCPVEVMKRVVDEMGMTEVTICYGMTETSPVST-QTGADDDLDR----- 354
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 294
+ VG+ PH+E KV + G + TRG VML YWD
Sbjct: 355 --------------RTSTVGRTHPHLESKVVDPETGLTVPRGTPGELCTRGYSVMLGYWD 400
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
+ V W+ TGD+ +D+ G + +VGR + GGENVYP EVE L HP
Sbjct: 401 EPEKTAEVLDAARWMHTGDLAVMDEAGYLNIVGRIKDMVIRGGENVYPREVEEFLYTHPD 460
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
I+ V+G+ + R E ++A V+LRE + L++E LR C K L
Sbjct: 461 IVDAQVIGVPDERYGEELMAWVQLREGAE---------------PLTAEALRAFCAGK-L 504
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
FK PR +V FP+T TGK+R+ E+R ++ L
Sbjct: 505 AHFKVPR-YVKVVDGFPMTVTGKVRKVEMREVSVTEL 540
>gi|88603692|ref|YP_503870.1| AMP-dependent synthetase/ligase [Methanospirillum hungatei JF-1]
gi|88189154|gb|ABD42151.1| AMP-dependent synthetase and ligase [Methanospirillum hungatei
JF-1]
Length = 517
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 189/416 (45%), Gaps = 51/416 (12%)
Query: 51 YSLRSLPFTHS------WAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYG 104
YS +L +H +P+ I +TSGTTG PKG +++HS + A+ +
Sbjct: 137 YSWENLTLSHDPLRPVPCSPDQVCQIQYTSGTTGRPKGAMLTHSGWLAALQAEGEALDLT 196
Query: 105 EDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIM 164
DD+YL P+ H+G +S +++L G +V + ++ + ++ +T L +P ++
Sbjct: 197 CDDIYLGIYPMAHVG-ISWGLSVLRAGGTYVIMERYNLDEYISLTREYQITILAGMPPVI 255
Query: 165 ADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLT 224
L T SV++I++GGG + S K+ F K +I+AYG++ET
Sbjct: 256 HALTE--TPPGTEDNFTSVRRIISGGGPMHSPTWKKFNERF-KIPVINAYGLSET----- 307
Query: 225 FMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-------SSH 277
+ L T+ P P A + VGKP + E+K+ G S H
Sbjct: 308 -IVLGCGTVIRPEDYPTA-----------DEYNSVGKPVGYAEVKIVEVGNPAKELTSPH 355
Query: 278 VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGG 337
G I RG V L YW+Q V + W TGDIG IDD G + + R+ I G
Sbjct: 356 AGEIALRGPGVALGYWNQPEETKEVFMEDGWFLTGDIGYIDDHGMLVITDRKKDMIIMSG 415
Query: 338 ENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKE 397
VYP EVE VL+ HP I I + G + E+ A V LR NKE
Sbjct: 416 WKVYPTEVENVLINHPKISDIAIFGCPDEEKGEIPAAAVVLR---------------NKE 460
Query: 398 LLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
L+ E L RE+ L G+K PR V+ + P K+ R E+R + S +S
Sbjct: 461 DTLTLEELSGWSREQ-LAGYKIPRRLVILNQ-LPRVGGWKLLRRELRESLCSEKRS 514
>gi|23099672|ref|NP_693138.1| AMP-binding protein [Oceanobacillus iheyensis HTE831]
gi|22777902|dbj|BAC14173.1| long-chain fatty-acid-CoA ligase [Oceanobacillus iheyensis HTE831]
Length = 547
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 204/453 (45%), Gaps = 61/453 (13%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEG 66
EL +PSL+ V +G +D ++K + ++ + L S + P
Sbjct: 139 ELNAERLPSLKNVVIMGEKRYPGAFHWNDIIDKAEEISREELIFQS-------QNLDPND 191
Query: 67 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAM 125
+ + +TSGTTG PKGV+++H L + +D P H G + +
Sbjct: 192 VINMQYTSGTTGFPKGVMLTHRNLTNNGFNIANCMKLTAEDRLCIPVPFFHCFGCVIGTL 251
Query: 126 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
A + VGA + I +FE + L+ VEQ VT+L VP + +A L S++
Sbjct: 252 AAVSVGATMIPIQEFEPEQVLKTVEQESVTALHGVPTMF--IAELNHPNFERYNLSSLRT 309
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+MK N +++ YG TE+S +T DP
Sbjct: 310 GVMAGSNCPVEVMKNVMNKMNMSEITICYGQTESSPVITQTRANDPI------------- 356
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAK 299
+ + VGK P+VE+K+ ++ G + TRG HVM Y+ A
Sbjct: 357 -------ELRVESVGKALPNVEVKIIDPATNEELPHYTQGELCTRGYHVMKGYYKNPEAT 409
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ WL TGD+ +DD G + GR I GGEN+YP E+E +L +HP I+
Sbjct: 410 QRTIDEDGWLHTGDLAIMDDNGYCKITGRLKDMIIRGGENIYPREIEELLYKHPKILDAQ 469
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VVG+ + + E V A + L+E + SS+ ++Q C + ++ +K
Sbjct: 470 VVGVPDEKFGEEVHAWIILKEGE----------------ISSSDEIKQFCNGQ-ISKYKI 512
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
P+ + +P+T++GKI++ ++R + ++ ++
Sbjct: 513 PK-HIFITDAYPMTASGKIQKFKLREKSLNEVE 544
>gi|218780924|ref|YP_002432242.1| AMP-dependent synthetase and ligase [Desulfatibacillum alkenivorans
AK-01]
gi|218762308|gb|ACL04774.1| Long-chain-fatty-acid CoA ligase (AMP-forming) [Desulfatibacillum
alkenivorans AK-01]
Length = 505
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 174/385 (45%), Gaps = 48/385 (12%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
+I +TSGTTG PKG +ISH+ SL + +G + YL APL HIGGLS A +
Sbjct: 161 VIMYTSGTTGKPKGAMISHNNAFWASLGLTHTLPWGYKERYLLVAPLFHIGGLSPVFANI 220
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
G VF+P F+ + ++ + ++TVP ++ +A + S+ +
Sbjct: 221 HKGLTTVFMPDFDPVGMYKTIQDERINFMMTVPLMLMAMAMVPPDVVEKFDLSSLNFFVC 280
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G +P L+ K+ YG TE + ++TF T
Sbjct: 281 GASPVPPSLIHLYNEK--GFKIAQVYGATEYTGAITFWT--------------------- 317
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSV 302
+ + + GKP H ++KVC GS VG + G V L YW+ A
Sbjct: 318 HEIGMDKCASAGKPVFHGQVKVCKPGSDEEVPAGEVGELCLFGPQVFLGYWNNPKASEEA 377
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
TG + +GD+G ID+ G V+++ R I SGGEN+YP E+E VL HP + V G
Sbjct: 378 LTGGCY-RSGDLGRIDEDGCVYVIDRLKDMIISGGENIYPAEIEQVLQSHPAVAEAAVTG 436
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + E+ VA V +R +E E + Q CR+ NL GFK +
Sbjct: 437 RPDEKWGEIPVAHVAVRPGETITE----------------EDILQVCRD-NLAGFKRVKE 479
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREV 447
V + + P STGKI + +R E+
Sbjct: 480 -VHFVEALPKNSTGKILKTVLREEL 503
>gi|386334612|ref|YP_006030783.1| long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum Po82]
gi|421899919|ref|ZP_16330282.1| fatty-acid--coa ligase protein [Ralstonia solanacearum MolK2]
gi|206591125|emb|CAQ56737.1| fatty-acid--coa ligase protein [Ralstonia solanacearum MolK2]
gi|334197062|gb|AEG70247.1| Long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum Po82]
Length = 573
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 214/449 (47%), Gaps = 54/449 (12%)
Query: 15 LQHTAIPSLRWHVSLGSSSS-DFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICF 72
LQ +P+LRW + +G ++ +N +++ +G S +L + +P+ A+ I F
Sbjct: 161 LQAAKLPALRWVIRMGEGATPGMINFGEVIARGQGEGVSADTLDAIAAALSPDDAINIQF 220
Query: 73 TSGTTGSPKGVVISHSALIVQS-LAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMV 130
TSGTTG+PKG ++H ++ + +A+ G D + + PL H G+ S +A
Sbjct: 221 TSGTTGAPKGATLTHINVVNNARFVAMAMNLQGTDRLCI-PVPLYHCFGMVMSVLACTAT 279
Query: 131 GACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GAC VF + F+ + L V + T+L VP + +A L + S++ +
Sbjct: 280 GACMVFPGEAFDPLATLRTVAEERCTALHGVPTMF--IAQLDHPEFHSFDVSSLRGGIMA 337
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P E+MK ++ AYGMTETS P +F + +
Sbjct: 338 GSPCPIEVMKRVVAEMHLREITIAYGMTETS-------------------PVSFQSAVTD 378
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 303
+ + + VG+ PH+++K+ DG+ V G + T+G VML YWD AK + S
Sbjct: 379 PLDK-RVTTVGRIQPHLQVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD-EAKTAES 435
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W+ TGD+ + D G +VGR + GGENVYP E+E L +HP + + V G+
Sbjct: 436 VVDGWMRTGDLATFDADGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGV 495
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E V A + L+ Q +E E +R C + + +K PR +
Sbjct: 496 PDPKYGEEVCAWIVLKPGQQATE----------------EEIRAFC-QGQIAHYKIPR-Y 537
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ + P+T TGK+++ +R ++ LK
Sbjct: 538 IRFVPEMPMTVTGKVQKFIMRERMIEELK 566
>gi|326775763|ref|ZP_08235028.1| Long-chain-fatty-acid--CoA ligase [Streptomyces griseus XylebKG-1]
gi|326656096|gb|EGE40942.1| Long-chain-fatty-acid--CoA ligase [Streptomyces griseus XylebKG-1]
Length = 535
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 177/387 (45%), Gaps = 55/387 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E D P H G+ +A
Sbjct: 187 IQYTSGTTGFPKGATLSHHNILNNGYFVGETIAYTEADRVCLPVPFYHCFGMVMGNLACT 246
Query: 129 MVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 185
GAC V P FE + L AV+Q TSL VP + L + G D S++
Sbjct: 247 SHGACIVIPGPSFEPGAVLTAVQQERCTSLYGVPTMFIAELNL----PDFAGYDLSSLRT 302
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P+E+MK A++ YGMTETS ++ T D LE
Sbjct: 303 GIMAGSPCPAEVMKRVVAEMHMAEVSICYGMTETSP-VSTQTRRDDDLER---------- 351
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCS--------DGSSHVGRILTRGAHVMLRYWDQFL 297
+ VG+ PH+E+KV GSS G + TRG VML YWDQ
Sbjct: 352 ---------RTGTVGRALPHIEVKVVDPVTGVTLPRGSS--GELRTRGYSVMLGYWDQPD 400
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
V W+ TGD+ + + G V +VGR I GGENVYP E+E L HP +
Sbjct: 401 RTADVVDAGRWMHTGDLAVMREDGYVQVVGRIKDMIIRGGENVYPREIEEFLYGHPKVAD 460
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG+ + R E ++ACV R+ D + ++ + +CRE+ L +
Sbjct: 461 VQVVGVPDERYGEEILACVIPRDP-------ADPPTLDE--------IFAYCRER-LAHY 504
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVR 444
K PR + + FP+T +GK+R+ E+R
Sbjct: 505 KIPRRLRIL-ETFPMTVSGKVRKVELR 530
>gi|440695436|ref|ZP_20877976.1| long-chain-fatty-acid--CoA ligase [Streptomyces turgidiscabies
Car8]
gi|440282494|gb|ELP69941.1| long-chain-fatty-acid--CoA ligase [Streptomyces turgidiscabies
Car8]
Length = 475
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 185/411 (45%), Gaps = 51/411 (12%)
Query: 35 DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 94
DF + D+ G+ PF + + + I FTSGTTG PKGV+++H+ +
Sbjct: 115 DFEGPPGVPVIDLKSGFLASGSPFERAVSGDDVSDIAFTSGTTGRPKGVLMTHAQTLRLY 174
Query: 95 LAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHC 153
+ E D YL P HI G + + A L+ GA + +P F+ LE VE+
Sbjct: 175 GEWCDLATLREGDRYLIVNPFFHIFGYKAGLIASLIRGATILPVPVFDVDRVLELVEREK 234
Query: 154 VTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISA 213
VT L P + L + S++ + G +P EL++ + P +++
Sbjct: 235 VTVLPGPPTLYHSLLA----AGDRRDLSSLRVAVTGSADIPVELIRRIVHDLPFQHIMTG 290
Query: 214 YGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD 273
YG+TE + T PG +F ++ VG P VE+ V D
Sbjct: 291 YGLTEAGTV---------TASRPGD---SFEDIA---------TTVGTPCDGVEVSVADD 329
Query: 274 GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRI 333
G +L RG VM Y D A + WL TGD+G++D+ G++ +VGR+
Sbjct: 330 GE-----VLVRGYSVMRGYLDDPAATAETIDADGWLHTGDLGTLDERGHLRIVGRKKDMF 384
Query: 334 KSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSS 393
GG N YP E+E LL+HP + V+G+ + RL ++ A V + + D
Sbjct: 385 IVGGFNAYPAEIEGFLLEHPAVAQAAVIGVPDERLGQVGKAFV-----VRAGDVTAD--- 436
Query: 394 KNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
EL+ S + GFKAPR FV + + PL +TGK+ +D++R
Sbjct: 437 ---ELIAWSRA--------RMAGFKAPR-FVEFLEELPLNATGKVMKDQLR 475
>gi|254281943|ref|ZP_04956911.1| AMP-dependent synthetase and ligase [gamma proteobacterium NOR51-B]
gi|219678146|gb|EED34495.1| AMP-dependent synthetase and ligase [gamma proteobacterium NOR51-B]
Length = 517
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 174/386 (45%), Gaps = 55/386 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV+ SH AL ++ + VYLH AP+ H+ MA ++
Sbjct: 164 IFYTGGTTGFPKGVMQSHRALWASAIGCMPEFAMSRSSVYLHVAPMFHVADFVGTMASVI 223
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
ACHV +P FE L+ + + ++ + VPA++ L T ++ +L G
Sbjct: 224 EAACHVMLPGFEPSVVLKTLAKERISHSLMVPAMIKMLMNHPEASST--DVSHLQYVLYG 281
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+P+ +++ ++P+ LI AYG TE + ++ M
Sbjct: 282 ASPMPAATLQQFMATWPEVDLIQAYGQTELAPVVSLMA---------------------A 320
Query: 250 SVHQPQG---VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPS 301
H+ G GKP ++++ + + G I+ G H ML YW+ KP
Sbjct: 321 DAHRRGGHLLKSAGKPTVVSDVRIVDESGQDLPLGGRGEIIVTGPHTMLGYWN----KPE 376
Query: 302 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ + W+ TGD G +DD G +++V R + +GGENV+ EVE ++ H + +
Sbjct: 377 ETAKALRDGWVYTGDAGYLDDEGFLYIVDRVKDMVVTGGENVFTTEVENAVISHDAVQDV 436
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+GI + E V A V L+ +E + HCR++ + G+K
Sbjct: 437 AVIGIPHPEWGEAVHAVVVLQPGAAVTEDE----------------IIAHCRDQ-IAGYK 479
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVR 444
P+ +P PL+ GK+ + E+R
Sbjct: 480 LPKSVSFRDEPLPLSGAGKVLKRELR 505
>gi|383825821|ref|ZP_09980966.1| hypothetical protein MXEN_13261 [Mycobacterium xenopi RIVM700367]
gi|383334278|gb|EID12720.1| hypothetical protein MXEN_13261 [Mycobacterium xenopi RIVM700367]
Length = 480
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 192/400 (48%), Gaps = 45/400 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ I+ FTSGTT PK V +SH+ L + G DD L P HI G+S+
Sbjct: 119 PDAVAIVLFTSGTTSVPKAVELSHNNLTTYVTGTVDFDSAGPDDAALICVPPYHIAGVSA 178
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR-DS 182
A++ L G V++P F+++ + V VT+ VP + L +++V + R S
Sbjct: 179 ALSNLYAGRKMVYLPDFDAEEWVRLVNSEHVTTATVVPTM---LDRIVKVLEQGDHRLPS 235
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + GG + L++ A P+ ++AYG+TETSS++ +T D
Sbjct: 236 LRNLAYGGSKVGLPLLRRALELLPEVGFVNAYGLTETSSTIAVLTPEDHRRSLAA----- 290
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFL 297
+ +V + G VG+ P +EL+V + G G + RG V RY
Sbjct: 291 ----SDAAVAKRLG-SVGQAVPGIELQVRDENGAVLGPGKTGELFVRGEQVSGRYT---- 341
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
SV + W T DI +D+ G +++ GR + I GGEN+ P E+E VL++HP +
Sbjct: 342 GIGSVLDEDGWFPTKDIAMLDEDGYLFISGRSDDTIIRGGENIAPAELEDVLIEHPDVRE 401
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG+ + + + +VA V E ++ D E LR + R K+L G
Sbjct: 402 VAVVGVDDPQWGQAIVAVVVPAEG-----ADPD-----------PEELRAYVR-KSLRGS 444
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 457
+ P V++R P +TGK+ +RRE++ L++ P+
Sbjct: 445 RTPDR-VVFRDELPTNATGKL----LRRELVEQLRAAPAE 479
>gi|83746599|ref|ZP_00943649.1| Long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum UW551]
gi|207742291|ref|YP_002258683.1| fatty-acid--coa ligase protein [Ralstonia solanacearum IPO1609]
gi|83726733|gb|EAP73861.1| Long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum UW551]
gi|206593679|emb|CAQ60606.1| fatty-acid--coa ligase protein [Ralstonia solanacearum IPO1609]
Length = 573
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 214/449 (47%), Gaps = 54/449 (12%)
Query: 15 LQHTAIPSLRWHVSLGSSSS-DFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICF 72
LQ +P+LRW + +G ++ +N +++ +G S +L + +P+ A+ I F
Sbjct: 161 LQAAKLPALRWVIRMGEGATPGMINFGEVIARGQGEGVSADTLDAIAAALSPDDAINIQF 220
Query: 73 TSGTTGSPKGVVISHSALIVQS-LAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMV 130
TSGTTG+PKG ++H ++ + +A+ G D + + PL H G+ S +A
Sbjct: 221 TSGTTGAPKGATLTHINVVNNARFVAMAMNLQGTDRLCI-PVPLYHCFGMVMSVLACTAT 279
Query: 131 GACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GAC VF + F+ + L V + T+L VP + +A L + S++ +
Sbjct: 280 GACMVFPGEAFDPLATLRTVAEERCTALHGVPTMF--IAQLDHPEFHSFDVSSLRGGIMA 337
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P E+MK ++ AYGMTETS P +F + +
Sbjct: 338 GSPCPIEVMKRVVAEMHLREITIAYGMTETS-------------------PVSFQSAVTD 378
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 303
+ + + VG+ PH+++K+ DG+ V G + T+G VML YWD AK + S
Sbjct: 379 PLDK-RVTTVGRIQPHLQVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD-EAKTAES 435
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W+ TGD+ + D G +VGR + GGENVYP E+E L +HP + + V G+
Sbjct: 436 VVDGWMRTGDLATFDADGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGV 495
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E V A + L+ Q +E E +R C + + +K PR +
Sbjct: 496 PDPKYGEEVCAWIVLKPGQQATE----------------EEIRAFC-QGQIAHYKIPR-Y 537
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ + P+T TGK+++ +R ++ LK
Sbjct: 538 IRFVPEMPMTVTGKVQKFIMRERMIEELK 566
>gi|384107460|ref|ZP_10008360.1| fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
gi|383832407|gb|EID71881.1| fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
Length = 521
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 176/387 (45%), Gaps = 56/387 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLA-KIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM 127
++ +T GTTG PKGV+++H + + L+ +A V + TAPL HIG L S
Sbjct: 162 MLLYTGGTTGKPKGVMVTHRSFMTSLLSYHLAGSSVRPGGVTMLTAPLFHIGALLSWYGQ 221
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 185
++G VF+P F + L A+++H VT VPA++ + + D S++
Sbjct: 222 TLLGGTLVFLPTFTPEGVLSAIDEHRVTGCALVPAMIQRICE----HPDFGTYDVSSLEF 277
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
I G G P L+ A FP I YGMTET L G G
Sbjct: 278 IGYGASGTPQSLLDRALEHFPSVNFIHVYGMTETG-----------VLTVLGGAEHRAGG 326
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCS-DG----SSHVGRILTRGAHVMLRYWDQFLAKP 300
S G+ P VE+ V + DG VG ++TRG HVM YW KP
Sbjct: 327 ARLRST--------GRATPIVEIAVIAPDGHPLPPGQVGEVVTRGDHVMAGYW----GKP 374
Query: 301 ---SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ + + W+ TGD G +DD G +++V R I +GGENVY EVE L HP +
Sbjct: 375 EDTATALRDGWMHTGDGGYLDDAGYLYIVDRLKDMIITGGENVYSAEVENALAAHPAVAS 434
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
V+G+ + E V A V R +++E LR H + + G+
Sbjct: 435 CAVIGVPDPDWGERVHAVVVPRPGHS----------------VTAEELRAHAKTL-IAGY 477
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVR 444
KAPR V + P++ TGKI + E+R
Sbjct: 478 KAPRT-VDFVGALPVSGTGKILKRELR 503
>gi|300788314|ref|YP_003768605.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei U32]
gi|384151750|ref|YP_005534566.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|399540198|ref|YP_006552859.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|299797828|gb|ADJ48203.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei U32]
gi|340529904|gb|AEK45109.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|398320968|gb|AFO79915.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
Length = 501
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 188/391 (48%), Gaps = 55/391 (14%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P ++ +TSGTTG+PKG ++H+ +++ +L + G E DV+L T PL H G S
Sbjct: 156 PGDTAVVLYTSGTTGTPKGAELTHANMVLNALTCHRVFGTVEHDVHLVTLPLFHSFGQSV 215
Query: 124 AM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+ A GA V +P+F+ ++ALE +++ VT VP + L +
Sbjct: 216 QLNAGFAAGATLVLLPRFDPRTALELMQREGVTFFAGVPTMYWGLVGADPAEFDLDAITG 275
Query: 183 VKKI-LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
+I ++GG LP E++++ + ++ YG++ETS TF PG++ +
Sbjct: 276 TLRIAVSGGAALPVEILEQVHKIY-GVRIREGYGLSETSPVATF--------NHPGRVAK 326
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQF 296
P S+ G+P VELK+ + V G I RG +VM Y
Sbjct: 327 ------PGSI--------GQPVWGVELKLIDKDGTEVPDGEAGEIAIRGHNVMKGY---- 368
Query: 297 LAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
L +P + + W TGDIG+ D G ++V R I GG NVYP E+E V++ HP
Sbjct: 369 LGRPDATAQAIRDGWFRTGDIGTRDTDGYYFIVDRAKDMIVRGGFNVYPRELEEVIMTHP 428
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
+ + VVG+ + E V A V + + L+ L C++ N
Sbjct: 429 AVSLVAVVGVPHPSHGEEVKAFV----------------IRKPDATLTEPELVSWCKQ-N 471
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+ G+K PR+ V +R FP+TSTGK+ + E+R
Sbjct: 472 MAGYKYPRV-VEFRDEFPMTSTGKVLKRELR 501
>gi|291295976|ref|YP_003507374.1| AMP-dependent synthetase and ligase [Meiothermus ruber DSM 1279]
gi|290470935|gb|ADD28354.1| AMP-dependent synthetase and ligase [Meiothermus ruber DSM 1279]
Length = 561
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 193/425 (45%), Gaps = 70/425 (16%)
Query: 52 SLRS-LPFTHSWA--PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD- 107
+LRS P T + P+ ++ +T GTTG KG +++H L+ + +A +G D+
Sbjct: 187 ALRSATPLTEPYPAKPDDVALLQYTGGTTGLSKGAMLTHRNLVANTYQSLA---WGGDEV 243
Query: 108 -------VYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLIT 159
V L P H+ G++ AM L G V +P+ E K +EA+E+H VT
Sbjct: 244 KALEGKGVMLGAIPFFHVYGMTVAMNYGLAAGYKLVLLPRPEVKPCIEAIEKHGVTHFPG 303
Query: 160 VPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTET 219
VP + ++K G +VK ++G LP E+ K+ + KL+ YG+TE
Sbjct: 304 VPTLYIGFINFPGIEKRKVG--TVKVCISGSAALPVEVAKK-FEALTGGKLVEGYGLTEA 360
Query: 220 SSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG----- 274
+ + P S + G +G P P V+ K+ +
Sbjct: 361 APCT---------------------HCNPLSGQRKMG-SIGIPMPGVDAKILDENLHELP 398
Query: 275 SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNG 331
VG + RG ++ML YW +P ++ + WL TGD+ +D+ G ++V R+
Sbjct: 399 PGEVGELAVRGPNIMLGYWQ----RPDETSKTIKIDWLLTGDMARMDEDGYFYIVDRKKD 454
Query: 332 RIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQ 391
I +GG N+YP EVE VL HPG+ VVG+ + E V A + +
Sbjct: 455 MIIAGGYNIYPREVEEVLFAHPGVAEAAVVGLPDEYRGETVAAFIVPKPGVN-------- 506
Query: 392 SSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
L+ E L ++CRE NL +K PR++ +R P ++ GK+ R E+R +
Sbjct: 507 --------LTQEELDKYCRE-NLAAYKVPRIYE-FRSELPKSAVGKVLRRELREAALKER 556
Query: 452 KSLPS 456
+ + S
Sbjct: 557 QKVGS 561
>gi|170722114|ref|YP_001749802.1| acyl-CoA synthetase [Pseudomonas putida W619]
gi|169760117|gb|ACA73433.1| AMP-dependent synthetase and ligase [Pseudomonas putida W619]
Length = 557
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 187/401 (46%), Gaps = 50/401 (12%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P + I +TSGTTG PKG +SH+ ++ +G E D + PL H G+
Sbjct: 200 PGDPINIQYTSGTTGFPKGATLSHNNVLNNGYMVGESLGLTEHDRLVVPVPLYHCFGMVM 259
Query: 124 AMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
A M + P F+ + L AV + T+L VP + +A L ++
Sbjct: 260 ANLGCMTHGSTLIYPNDAFDPLATLRAVAEEKATALYGVPTMF--IAELDHPQRGAFDLS 317
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P E+M+ + A++ AYGMTETS ++ T + LE
Sbjct: 318 SLRTGIMAGATCPIEVMRRVIDEMHMAQVQIAYGMTETSP-VSLQTGANDDLER------ 370
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQF 296
VT VG+ P +E KV +DG++ +G + TRG +VML YW+
Sbjct: 371 ---RVT----------SVGRTQPRLESKVIDADGNTVPRGDIGELCTRGYNVMLGYWNNP 417
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
A GE W+ TGD+ +D+ G V +VGR I GGEN+YP E+E HP +
Sbjct: 418 EATAESIDGEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVA 477
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ V+G+ ++ E +VA VRL Q ++S+ LR+ R + +
Sbjct: 478 DVQVIGVPCSKYGEEIVAWVRLHPGHQ----------------VASDELREWARAR-IAH 520
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 457
FK PR F + FP+T TGK+++ +R ++SLP
Sbjct: 521 FKVPRYFRFVDE-FPMTVTGKVQKFRMRE---ISIESLPEQ 557
>gi|374571689|ref|ZP_09644785.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM471]
gi|374420010|gb|EHQ99542.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM471]
Length = 564
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 185/402 (46%), Gaps = 47/402 (11%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 116
P S + AV I FTSGTTGSPKGV ++H ++ + E D PL
Sbjct: 195 PLGASLQFDDAVNIQFTSGTTGSPKGVTLTHHNILNNGYFVGRAMRLTEQDRICIPVPLY 254
Query: 117 HIGGLSSA-MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVK 174
H G+ +A + +GA V+ + F+ + L +EQ T+L VP + +A L +
Sbjct: 255 HCFGMVMGNLASVTLGATMVYPGEGFDPLATLRTIEQEKCTALYGVPTMF--IAELDHGE 312
Query: 175 KTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 234
+ S++ + G P E+MK + ++ AYGMTETS ++F + D L+
Sbjct: 313 FSNFDLTSLRTGIMAGAPCPIEVMKRVNSEMNMGEVTIAYGMTETSP-VSFQSAVDDPLD 371
Query: 235 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVM 289
+ VG+ PHVE+KV DG G + TRG VM
Sbjct: 372 R-------------------RVSTVGRIHPHVEVKVVDLDGKIVKRGERGELCTRGYSVM 412
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
L YW++ V W+ TGDI IDD G +VGR + GGEN+YP E+E L
Sbjct: 413 LGYWEEAEKTADVLDANGWMHTGDIAIIDDQGYCNIVGRIKDMVIRGGENLYPREIEEFL 472
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
+HP I + + G+A+ R E + A +R+R L+ E +R C
Sbjct: 473 YRHPKIQDVQIFGVADTRYGEELCAWIRVRSGET----------------LTMEEVRAFC 516
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ + K PR +V + FP+T TGKI++ +R EV L
Sbjct: 517 -DGQIAHNKIPR-YVEFVDAFPMTVTGKIQKFLMRDEVEQRL 556
>gi|297191141|ref|ZP_06908539.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
gi|197723338|gb|EDY67246.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
Length = 535
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 175/387 (45%), Gaps = 49/387 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MA 126
V I +TSGTTG PKG +SH ++ ++ Y E D P H G+ +A
Sbjct: 184 VNIQYTSGTTGFPKGATLSHHNILNNGYFVGEMIAYTEQDRVCIPVPFYHCFGMVMGNLA 243
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
GAC V P F+ + L AV+Q TSL VP + +A L +++
Sbjct: 244 ATSHGACMVIPAPSFDPAATLRAVQQERCTSLYGVPTMF--IAELNLPGFASYDLSTLRT 301
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 302 GIMAGSPCPVEVMKRVVAEMNMAEVSICYGMTETSP-VSTQTRRDDDLER---------- 350
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQ-FLA 298
+ VG+ PH+E+K+ S G + TRG VML YWD+
Sbjct: 351 ---------RTGTVGRVMPHIEVKIVDPVSGVTLPRGEAGELCTRGYSVMLGYWDEPEKT 401
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
SV G W+ TGD+ + + G V +VGR I GGENVYP E+E L HP I +
Sbjct: 402 AESVDAGR-WMHTGDLAVMREDGYVQIVGRIKDMIIRGGENVYPREIEEFLYAHPKIADV 460
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG+ + R E ++ACV R+ + E + + CRE+ L +K
Sbjct: 461 QVVGVPDERYGEEILACVIPRDPADAP---------------TLEEITEFCREQ-LAHYK 504
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRR 445
PR + FP+T +GK+R+ E+RR
Sbjct: 505 IPRRLEVLAD-FPMTVSGKVRKVELRR 530
>gi|288555267|ref|YP_003427202.1| acetylCoA synthase AMP-binding subunit [Bacillus pseudofirmus OF4]
gi|288546427|gb|ADC50310.1| acetylCoA synthase, AMP-binding domain protein [Bacillus
pseudofirmus OF4]
Length = 548
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 212/475 (44%), Gaps = 75/475 (15%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH 60
+++ D+ D+ Y+E+ + +P L+ SS ++++ + P +
Sbjct: 109 LILMDQFRDASYIEMLYEIVPELKLAERGNLQSSKLPKLKNIIF------LGEEAYPDMY 162
Query: 61 SWA----------------------PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKI 98
+W + + + +TSGTTG PKGV+++H L ++
Sbjct: 163 TWGELIELGKKVTDAELDARMDSLDKDDVINMQYTSGTTGFPKGVMLTHYNLANNAVNIA 222
Query: 99 AIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSL 157
+ D P H G + +A + VGA V + +F K+ LEAV + T L
Sbjct: 223 GCMNLTNKDRLCIPVPFFHCFGCVLGTLACVSVGATMVPVEEFSPKAVLEAVSKEKCTGL 282
Query: 158 ITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 217
VP + + L S++ + G P E+MK + +++ AYG T
Sbjct: 283 HGVPTMF--IGELNDPDFDTYDLSSLRTGIMAGSNCPIEVMKAVVDKMGASEITIAYGQT 340
Query: 218 ETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH 277
E+S +T + DP + + VG+ P+VE+K+ G++
Sbjct: 341 ESSPVITQTRVDDPLM--------------------LRVESVGRALPNVEVKIVEPGTND 380
Query: 278 ------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNG 331
G + TRG HVM Y+ A + T + WL TGD+ +D+ G + GR
Sbjct: 381 EVPRGVQGELCTRGYHVMKGYYKNPEATKAAITEDGWLHTGDLAVMDENGYCRITGRLKD 440
Query: 332 RIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQ 391
I GGEN+YP E+E L QHP ++ + VVGI + + E V A ++L+E ES
Sbjct: 441 MIIRGGENIYPREIEEFLYQHPKVLDVQVVGIPDEKYGEEVSAWIKLKE----GEST--- 493
Query: 392 SSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
+++ LR+ C K + +K PR ++ + +P+T++GKI++ ++R++
Sbjct: 494 ---------TADELRKDCMGK-IAAYKIPR-YIAFVDEYPMTASGKIQKFKLRQQ 537
>gi|288962477|ref|YP_003452772.1| fatty-acyl-CoA synthase [Azospirillum sp. B510]
gi|288914743|dbj|BAI76228.1| fatty-acyl-CoA synthase [Azospirillum sp. B510]
Length = 541
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 176/394 (44%), Gaps = 48/394 (12%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
AP+ I +TSGTTG PKG ++ H L+ +G G DDV+++ PL H G
Sbjct: 187 APDDIAQIQYTSGTTGFPKGAMLCHRGLVNNGRFYARTIGMGPDDVWVNPMPLFHTAGCG 246
Query: 123 -SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+ + L G V F+ L+ +E + ++ VP ++ L L + +
Sbjct: 247 LTTLGALQTGGAQVLPHGFDPALILDLIESEGGSMVLCVPTMLIRL--LEQAGSRRRDLS 304
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S + + GG +P EL++ A I +G TE S +T
Sbjct: 305 SWRMVTLGGAPVPPELIRRAEAELGLTVAI-GFGQTEASPYIT----------------- 346
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 295
+ PN VG+P P E+KV + G I TRG M Y+D
Sbjct: 347 ---HTLPNDSVPDWRRSVGRPLPRTEVKVIDQATGKTVPFGVSGEICTRGYLTMKGYFDD 403
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
+A + + WL TGD+GS+D G + GR I GGENV+P E+E +L HP +
Sbjct: 404 PVATAAALDPDGWLHTGDLGSMDVHGYCRIHGRLKDMIIRGGENVFPREIEEILFTHPSV 463
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ + VVG+ + E+V A VR+++ + S+E L CR +L
Sbjct: 464 VDVAVVGLPDPEWGEVVAAFVRVKDDHR----------------PSAEELDAFCR-NHLA 506
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 449
FK PR + + FP T++GKI++ E+R ++
Sbjct: 507 SFKIPRRWTFLDR-FPQTASGKIKKFELRANTLA 539
>gi|357410305|ref|YP_004922041.1| AMP-dependent synthetase/ligase [Streptomyces flavogriseus ATCC
33331]
gi|320007674|gb|ADW02524.1| AMP-dependent synthetase and ligase [Streptomyces flavogriseus ATCC
33331]
Length = 535
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 135/433 (31%), Positives = 193/433 (44%), Gaps = 55/433 (12%)
Query: 21 PSLRWHVSLGSSSSD-FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 79
P+LR +G S D D +TA+ L +LR + + + I +TSGTTG
Sbjct: 144 PALRSVHYIGDPSWDELTAAADTVTAEEL---ALREAGLSC----DDPINIQYTSGTTGF 196
Query: 80 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-I 137
PKG +SH ++ +V Y E+D P H G+ + + GAC V
Sbjct: 197 PKGATLSHHNILNNGYFVGEMVAYTEEDRVCLPVPFYHCFGMVMGNLGITSHGACIVIPA 256
Query: 138 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 197
P FE + L AVE+ TSL VP + +A L S++ + G P E+
Sbjct: 257 PAFEPAAVLAAVERERCTSLYGVPTMF--IAELALPGFASYDLSSLRTGIMAGSPCPVEV 314
Query: 198 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 257
MK ++ YGMTETS T T D LE +
Sbjct: 315 MKRVVAEMHMDEVSICYGMTETSPVST-QTRRDDDLER-------------------RTG 354
Query: 258 CVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 311
VG+ PH+E+KV + G + TRG VML YWDQ V W+ T
Sbjct: 355 TVGRVMPHIEVKVIDPVTGVTLPRGEAGELCTRGYSVMLGYWDQPERTAEVVDAGRWMHT 414
Query: 312 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 371
GD+ + + G V +VGR I GGENVYP E+E L HP I+ + VVG+ +AR E
Sbjct: 415 GDLAVMREDGYVQIVGRIKDMIIRGGENVYPREIEEFLHGHPKIVDVQVVGVPDARYGEE 474
Query: 372 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 431
++ACV D + ++ L +CRE+ L +K PR + + FP
Sbjct: 475 ILACV-------IPLDPADPPTLDE--------LTVYCRER-LAHYKIPRELRILQA-FP 517
Query: 432 LTSTGKIRRDEVR 444
+T +GK+R+ E+R
Sbjct: 518 MTVSGKVRKVELR 530
>gi|427430670|ref|ZP_18920432.1| Acetoacetyl-CoA synthetase [Caenispirillum salinarum AK4]
gi|425878639|gb|EKV27353.1| Acetoacetyl-CoA synthetase [Caenispirillum salinarum AK4]
Length = 566
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 183/390 (46%), Gaps = 49/390 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I FTSGTTG PKG ++H ++ + G D PL H G+ + +
Sbjct: 214 IQFTSGTTGFPKGATLTHHNILNNGFFVAEAIRLGHGDRLCIPVPLYHCFGMVMGNLGCV 273
Query: 129 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA V+ + F+ + LE VE+ T L VP + +A L + S++ +
Sbjct: 274 THGATMVYPGEAFDPLAVLETVEREKCTGLYGVPTMF--IAQLDHPEFKSFNLSSLRTGI 331
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK ++ AYGMTETS ++F T D LE
Sbjct: 332 MAGSPCPIEVMKRVIAEMNMEEVTIAYGMTETSP-VSFQTAADDELEA------------ 378
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYW-DQFLAKPS 301
+ VG+ PH+E+K+ DG G + TRG VML YW D+ + S
Sbjct: 379 -------RVSTVGRVQPHLEVKIVDLDGRIVPRGTAGELCTRGYSVMLGYWNDEEKTRES 431
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ + W+ TGD+ ++D+ G +VGR + GGEN+YP E+E L +HP + + V+
Sbjct: 432 IDSAG-WMHTGDLATLDEHGYCKIVGRIKDMVIRGGENIYPREIEEFLYRHPAVNDVQVI 490
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E + AC+RLRE + +E E +R+ C+ + +K PR
Sbjct: 491 GVPDKKYGEELCACIRLREGHEATE----------------EEIREFCK-GQIAHYKIPR 533
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
++ + FP+T TGK+++ +R+ + L
Sbjct: 534 -YIRFVDEFPMTVTGKVQKYVMRKHIAEDL 562
>gi|423559326|ref|ZP_17535628.1| hypothetical protein II3_04530 [Bacillus cereus MC67]
gi|401188793|gb|EJQ95854.1| hypothetical protein II3_04530 [Bacillus cereus MC67]
Length = 518
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 195/389 (50%), Gaps = 50/389 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLS-SAMAM 127
I +TSGTTG+PKGV+++H A +VQS I I + +DDV++ +APL HI G++ + +
Sbjct: 169 ILYTSGTTGTPKGVMVTHRA-VVQSAQTIGIELHCTQDDVFIISAPLFHIFGMAINMLCA 227
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ +G + KF + L+ +EQ VT VP + L K S++ L
Sbjct: 228 VAMGGRMILQEKFRPRETLQLIEQEKVTIQKGVPTMFIKELELEDFDKY--DLSSLRAGL 285
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G +P++ + E L ++G+TET S MT Y T + N+T
Sbjct: 286 VGAAPIPAKTVTEIRERM-GINLCQSFGITETVS--ITMTSYGDTKQ----------NIT 332
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
+GK P V LK+ + VG I +G VM Y++ V
Sbjct: 333 ET---------LGKAIPGVTLKIVDENRVALLPGEVGEIAVKGFGVMKGYYNMPEQTKQV 383
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
E W +GD+G++D G + VGR+ I GG NVYP+E+EAV+++HP +I VVG
Sbjct: 384 LDNEDWYYSGDLGTLDHQGYLRFVGRKKEMIIRGGLNVYPQEIEAVIMKHPKVIEAAVVG 443
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + L E+ A +RL KN E + S E ++ + +EK + +K P
Sbjct: 444 LPDKVLGEIACAVIRL---------------KNGE-VSSEEEMKLYLKEK-MAIYKLPEK 486
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
V++ FP+T++GKI++ ++R +V S++
Sbjct: 487 -VIFTDEFPVTASGKIQKLKLREQVSSNI 514
>gi|111023082|ref|YP_706054.1| long-chain-fatty-acid--CoA ligase [Rhodococcus jostii RHA1]
gi|110822612|gb|ABG97896.1| probable long-chain-fatty-acid--CoA ligase [Rhodococcus jostii
RHA1]
Length = 530
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 186/390 (47%), Gaps = 60/390 (15%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCHIGGLSSAMAM 127
+I +TSGTTG+PKG V+SHS ++ QS+ I + Y DD+ +P+ H+ L S M
Sbjct: 178 LILYTSGTTGTPKGAVLSHSNMVGQSITCIRAMRYDRGDDIGFLASPVFHVAALGSVAPM 237
Query: 128 LMVGACHVFIP--KFESKSALEAVEQHCVTSLITVP----AIMADLATLIRVKKTWKGRD 181
LM+G V P F L+ EQ +T++ VP A+ AD T +GRD
Sbjct: 238 LMLGGTTVIHPLKAFNPTEMLDVWEQERITTVFLVPVQWQAVCAD--------PTVRGRD 289
Query: 182 SVKKILNGGGGLPSE-LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
++++ G S+ +++ ++FP+A +++ +G TE S +T + D + G
Sbjct: 290 LALRVISWGAAPASDTVLRAMADTFPRALIVAVFGQTEMSP-ITCVLDGDDAIRKLG--- 345
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQ 295
VGKP P ++ +V D + V G I+ RG +ML YW
Sbjct: 346 -----------------SVGKPIPTIQTRVVDDDMNDVAPGTVGEIVYRGPTMMLEYWQN 388
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
A G W +GD+ DD G V++V R+ I SGGEN+Y EVE VL HP I
Sbjct: 389 PAATADAFAGG-WFHSGDLVRQDDEGFVYVVDRKKDMIISGGENIYCAEVENVLFGHPRI 447
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
VVG + + TE+ VA V L D+ S L+ E L +K L
Sbjct: 448 REAAVVGRPDPKWTEVPVAVVALD----------DEGSD-----LTVEELAAWLDDK-LA 491
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
+K P+ V+ P ++GK+ + E+R+
Sbjct: 492 RYKHPKDVVI-VDALPRNASGKVVKGELRK 520
>gi|421595874|ref|ZP_16039823.1| AMP-binding domain protein, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404272017|gb|EJZ35748.1| AMP-binding domain protein, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 469
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 184/391 (47%), Gaps = 47/391 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMA 126
V I FTSGTTGSPKGV ++H ++ + E D PL H G + +A
Sbjct: 111 VNIQFTSGTTGSPKGVTLTHHNILNNGYFVGRAMRLNEQDRICIPVPLYHCFGMVMGNLA 170
Query: 127 MLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ +GA V+ + F+ + L +EQ T+L VP + +A L + S++
Sbjct: 171 SVTLGAAMVYPGEGFDPLATLRTIEQEKCTALYGVPTMF--IAELDHPEFKAFNLKSLRT 228
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+MK + ++ AYGMTETS ++F + + LE
Sbjct: 229 GIMAGAPCPIEVMKRVNSEMNMREVTIAYGMTETSP-VSFQSAVNDPLER---------- 277
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLAKP 300
+ VG+ PHVE+KV +G G + TRG VML YW++
Sbjct: 278 ---------RVSTVGRIHPHVEVKVVDLEGRIVKRGQRGELCTRGYSVMLGYWEEKEKTA 328
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
V W+ TGD+ ++DD G +VGR + GGEN+YP E+E L +HP I + +
Sbjct: 329 DVLDANGWMHTGDLATLDDEGYCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQDVQI 388
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
G+A++R E + A +R+R Q L++E +R C E + K P
Sbjct: 389 FGVADSRYGEELCAWIRVRSGEQ----------------LTAEDVRAFC-EGQIAHNKIP 431
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
R +V + FP+T TGKI++ +R EV L
Sbjct: 432 R-YVEFVDEFPMTVTGKIQKFLMRDEVEQRL 461
>gi|377568916|ref|ZP_09798091.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
gi|377533823|dbj|GAB43256.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
Length = 547
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 201/465 (43%), Gaps = 55/465 (11%)
Query: 1 MLVTDESSDSWY---LELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLP 57
+L + DS Y LE + P LR V S D L AD R
Sbjct: 126 VLAAESFKDSAYASMLEQARSRCPELREVVLFDSPGWD------ALCADASADELERVAE 179
Query: 58 FTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH 117
S +P+ + I +TSGTTG PKG +SH + ++ Y DD P H
Sbjct: 180 IAASLSPDDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGELLNYTADDRICLPVPFYH 239
Query: 118 -IGGLSSAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK 175
G + +A GA V P F+ ++ L+AV ++ TSL VP + +
Sbjct: 240 CFGMVMGNLAATSHGAAMVIPAPAFDPRATLDAVAEYRCTSLYGVPTMFI-AELDLLDDG 298
Query: 176 TWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
S++ + G P +M++ + ++ YGMTETS T + DP
Sbjct: 299 LDIDLSSLRTGIMAGSPCPEYVMRQVVDRLHMREVSICYGMTETSPVSTQTRVDDPL--- 355
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVM 289
+ + VG+ PH+E+K+ G+ G + TRG VM
Sbjct: 356 -----------------ELRVTTVGRVGPHLEIKIVDPGTGETSGRGVTGELCTRGYSVM 398
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
YW++ + W+ TGD+ +DD G V + GR + GGEN+YP E+E L
Sbjct: 399 TGYWNEPEKTAEAIDADGWMHTGDLADMDDNGYVRITGRIKDMVIRGGENIYPREIEEFL 458
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
HP I+ V+G+ + + E ++A VRLR D +++ +++ LR+
Sbjct: 459 YTHPDILDAQVIGVPDEKYGEELMAWVRLR----------DTATE-----FTADDLREFA 503
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
K + K PR +V + FP+T TGK+R+ +R E +S L+ L
Sbjct: 504 TGK-IARHKIPR-YVHVVEEFPMTVTGKVRKVAMRDEAVSILEQL 546
>gi|138894562|ref|YP_001125015.1| long-chain fatty acid CoA ligase (AMP-binding) [Geobacillus
thermodenitrificans NG80-2]
gi|134266075|gb|ABO66270.1| Long-chain fatty-acid-CoA ligase [Geobacillus thermodenitrificans
NG80-2]
Length = 539
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 202/429 (47%), Gaps = 52/429 (12%)
Query: 27 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 86
VS G+ SS + D+ + L S + P A + AV+ +T GTTG KG +++
Sbjct: 149 VSFGAPSSASLAAEDVTFDEFLAEGSGQVRPVPIEPAHDVAVL-QYTGGTTGRSKGAMLT 207
Query: 87 HSALIVQSLAKIAIV-GYGE--DDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFES 142
H + L G E + YL PL H+ ++S M + + GA ++ +P+FE
Sbjct: 208 HRNIFANVLQCAEFFKGTFEMGKERYLTVIPLFHVFAMTSGMNLAIYQGAENILLPRFEL 267
Query: 143 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEAT 202
K LE + T VP + + V++ G S+K +G +P ELM++
Sbjct: 268 KEVLETIRDKQPTVFPGVPTMYVAITNTPGVEQY--GISSIKTCNSGSAPMPMELMRD-F 324
Query: 203 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 262
+ A ++ YG++E S +T +P P + +P V +G P
Sbjct: 325 EAKTGAVVLEGYGLSEASP----VTHCNP----------------PFAARKPGTVGIGMP 364
Query: 263 APHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 317
++ + G+ VG ++ RG VM YW+ + +V+ + WL TGD+ SI
Sbjct: 365 LTEYKVVDVATGTQELPPGEVGELIIRGPQVMKGYWN-MPEETAVTLRDGWLYTGDLASI 423
Query: 318 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 377
D+ G V +V R+ I +GG N+YP EVE VL +HP + VV+G+ ++ E V A +
Sbjct: 424 DEEGYVTIVDRKKDMIIAGGYNIYPREVEEVLYEHPAVKEAVVIGVPDSYRGETVKAVIV 483
Query: 378 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 437
L++ Q +E + + +HCR KNL +K PR+ V +R P T+ GK
Sbjct: 484 LKDGQQANEDD----------------IIRHCR-KNLASYKVPRI-VEFRTELPKTNVGK 525
Query: 438 IRRDEVRRE 446
I R +R E
Sbjct: 526 ILRRALREE 534
>gi|404320688|ref|ZP_10968621.1| AMP-dependent synthetase and ligase [Ochrobactrum anthropi CTS-325]
Length = 562
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 208/443 (46%), Gaps = 53/443 (11%)
Query: 20 IPSLRWHVSLGSSSSDFVNKRDMLT--ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 77
+P+LR + LG+ + + D +T D + G L L + + + I FTSGTT
Sbjct: 156 LPNLRCVIRLGAEQTPGMLNFDEVTQSGDEVTGQELAQL--SEELQFDDPINIQFTSGTT 213
Query: 78 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVF 136
GSPKG +SH ++ + E D P H G+ +A + G+C V
Sbjct: 214 GSPKGATLSHHNILNNGFFVGEAMQLSEQDRLCIPVPFYHCFGMVLGNLACVTHGSCMV- 272
Query: 137 IPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 194
IP F+ L+ VE+ T L VP + +A L + + S++ + G P
Sbjct: 273 IPNDSFDPLLTLQTVEEEQCTGLHGVPTMF--IAMLDHPEFSRFNLTSLRTGIMAGSPCP 330
Query: 195 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 254
E+M+ + ++++ AYGMTETS P +F + T + + +
Sbjct: 331 IEVMRRVVSEMHQSEITIAYGMTETS-------------------PVSFQSSTTDPLER- 370
Query: 255 QGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 309
+ VG+ PH+E+K+ +DG G +LTRG VM YW+ + W+
Sbjct: 371 RVSTVGRIHPHLEVKIVDADGKVVPRGEKGELLTRGYSVMRGYWNDAESSAGAIDDAGWM 430
Query: 310 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 369
TGD+ +ID+ G +VGR I GGEN+YP E+E L HP I + + GI + +
Sbjct: 431 HTGDLATIDEEGYCNIVGRIKDLIIRGGENIYPREIEEFLFTHPAISDVQIFGIPDRKFG 490
Query: 370 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 429
E++ A V+L +K+ LS E L ++CR++ + +K P + +
Sbjct: 491 EIICAWVKL----------------HKDGELSEEELIEYCRQR-IAHYKVP-AHIRFVDQ 532
Query: 430 FPLTSTGKIRRDEVRREVMSHLK 452
FP+T TGKI++ +R+ ++ L+
Sbjct: 533 FPMTVTGKIQKFVMRQVMIEELE 555
>gi|182435126|ref|YP_001822845.1| AMP-binding protein [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178463642|dbj|BAG18162.1| putative acyl-CoA synthetase [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 535
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 177/387 (45%), Gaps = 55/387 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E D P H G+ +A
Sbjct: 187 IQYTSGTTGFPKGATLSHHNILNNGYFVGETIAYTEADRVCLPVPFYHCFGMVMGNLACT 246
Query: 129 MVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 185
GAC V P FE + L AV+Q TSL VP + L + G D S++
Sbjct: 247 SHGACIVIPGPSFEPGAVLTAVQQERCTSLYGVPTMFIAELNL----PDFAGYDLSSLRT 302
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P+E+MK A++ YGMTETS ++ T D LE
Sbjct: 303 GIMAGSPCPAEVMKRVVAEMHMAEVSICYGMTETSP-VSTQTRRDDDLER---------- 351
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCS--------DGSSHVGRILTRGAHVMLRYWDQFL 297
+ VG+ PH+E+KV GSS G + TRG VML YWDQ
Sbjct: 352 ---------RTGTVGRALPHIEVKVVDPVTGVTLPRGSS--GELRTRGYSVMLGYWDQPD 400
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
V W+ TGD+ + + G V +VGR I GGENVYP E+E L HP +
Sbjct: 401 RTADVVDPGRWMHTGDLAVMREDGYVQVVGRIKDMIIRGGENVYPREIEEFLYGHPKVAD 460
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG+ + R E ++ACV R+ D + ++ + +CRE+ L +
Sbjct: 461 VQVVGVPDERYGEEILACVIPRDP-------ADPPTLDE--------ISAYCRER-LAHY 504
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVR 444
K PR + + FP+T +GK+R+ E+R
Sbjct: 505 KIPRRLRIL-ETFPMTVSGKVRKVELR 530
>gi|403528225|ref|YP_006663112.1| acyl-CoA synthetase [Arthrobacter sp. Rue61a]
gi|403230652|gb|AFR30074.1| putative acyl-CoA synthetase [Arthrobacter sp. Rue61a]
Length = 558
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 184/397 (46%), Gaps = 49/397 (12%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS- 122
P + + +TSGTTG PKG ++H ++ + ++ Y E D + P H G+
Sbjct: 200 PYDPINLQYTSGTTGFPKGATLTHHNILNNGHSIGRLLNYTEHDRVVIPVPFYHCFGMVI 259
Query: 123 SAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ L GA + IP F + +ALEAV+ TSL VP + +A L
Sbjct: 260 GNLNALSFGAATI-IPGRGFNASAALEAVQDFGGTSLYGVPTMF--IAELALPDFASYDL 316
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
+++ + G P E+M+ + + YGMTETS T MT TLE
Sbjct: 317 STLRTGVMAGSLCPIEVMRRVIDEMHMVDVAICYGMTETSPVST-MTRAGDTLEQ----- 370
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 294
+ VG+ PH+E +V GS V G + TRG VM YW
Sbjct: 371 --------------RTSTVGRTMPHLESRVIDPGSMEVVERGVIGELCTRGYSVMQGYWG 416
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
Q E W+ TGD+ +D+ G + + GR + GGEN+YP E+E L HP
Sbjct: 417 QPDKTAEAIDAEGWMHTGDLARMDEDGYLVIEGRIKDMVIRGGENIYPREIEEFLYLHPS 476
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
I + V+G+ + + E ++AC+ L K L++E L ++CR K L
Sbjct: 477 IQDVQVIGVPDEKYGEELMACIIL---------------KPGSPALTAEELAEYCRGK-L 520
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+K PR +V R+ FP+T +GK+R+ ++R+E +S L
Sbjct: 521 AHYKIPR-YVDVRESFPMTVSGKVRKVDMRQEAVSRL 556
>gi|254776094|ref|ZP_05217610.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 507
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 180/387 (46%), Gaps = 54/387 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIV----GYGEDDVYLHTAPLCHIGGLSSAM 125
+ +TSGTTG PKGV +H A + + I + GED L + PL H+ G +S +
Sbjct: 159 LFYTSGTTGHPKGVPTTHEAFLTNTENAIRCLQQPRDLGEDMRTLISVPLFHVTGCNSQL 218
Query: 126 -AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 182
A +G V +P + + L AV V+ ++TVPAI A L+ K + G D
Sbjct: 219 LAAARLGGASVILPALDLDTLLNAVVAERVSVMVTVPAIYA----LLLRHKDFAGNDVSR 274
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
V+ + GG + L++ ++FP A + + YGMTET+S +T
Sbjct: 275 VRWVGYGGAPIAPSLVRTVKDAFPHATVFNGYGMTETASLMT------------------ 316
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVC--SDGSSHVGRILTRGAHVMLRYWDQFLAKP 300
V P+ VG P V+L + D VG ++TRG +V YW++ A
Sbjct: 317 ---VLPDREAVEHADSVGYAVPSVDLGLIPFGDNEPGVGELVTRGGNVTAGYWNRPQATA 373
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
S G WL TGD+ +DD G V ++ R I GGENV EVEAVLL PG+ V
Sbjct: 374 STFAGG-WLHTGDVVRVDDAGRVHIIDRLKDIINRGGENVSSVEVEAVLLGAPGVADACV 432
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ + + E V A + + + + D + + +HCR + L FK P
Sbjct: 433 LGVPDDVMGEKVGAVL-------FGDDDIDVPA-----------VLEHCRGR-LADFKVP 473
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREV 447
+ + P P + GK+ + +R +V
Sbjct: 474 QYVTIADGPLPRNAGGKLLKARLRDQV 500
>gi|392953699|ref|ZP_10319253.1| AMP-binding domain protein [Hydrocarboniphaga effusa AP103]
gi|391859214|gb|EIT69743.1| AMP-binding domain protein [Hydrocarboniphaga effusa AP103]
Length = 582
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 184/394 (46%), Gaps = 51/394 (12%)
Query: 67 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-M 125
A+ I FTSGTTGSPKG +SH ++ A + E D PL H G+ +
Sbjct: 219 AINIQFTSGTTGSPKGATLSHRNILNNGYFVGASMDLREGDRLCIPVPLYHCFGMVMGNL 278
Query: 126 AMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
A + GA ++ P F++ + L+A+E T L VP + +A + + S++
Sbjct: 279 ACITRGATMIYPAPTFDALATLKAIESERCTGLHGVPTMF--IAQVEHPEFKSFDLSSLR 336
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E+M++ + AYGMTETS P +F
Sbjct: 337 NGVMAGAPCPEEVMRKLIAHMNLRDITIAYGMTETS-------------------PVSFQ 377
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLAK 299
+ +P+S + VG+ PH+E KV SDG G + TRG VML YW+
Sbjct: 378 S-SPSSPLDRRVSTVGRVQPHLECKVIDSDGKVVAHGERGELCTRGYSVMLGYWNDAEKT 436
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ ++ TGD+ +ID G +VGR + GGEN+YP E+E L +HP I
Sbjct: 437 AEAIDADGYMHTGDLATIDAEGYCAIVGRIKDLVIRGGENIYPREIEEFLFKHPLIEDAQ 496
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VVG+ + + E V V+LR SE+ LR+ CRE+ + +K
Sbjct: 497 VVGVPDEKYGEEVCVWVKLRAGATMSEAQ----------------LREFCRER-IAHYKV 539
Query: 420 PRLFVLWRKPFPLTSTGKIR----RDEVRREVMS 449
PR +V + + FP+T TGKI+ RD + RE+ S
Sbjct: 540 PR-YVRFVEEFPMTVTGKIQKFMIRDAMTREIAS 572
>gi|9957179|gb|AAG09247.1|AF176639_1 long chain fatty acid-CoA ligase [Pseudomonas stutzeri]
Length = 567
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 177/389 (45%), Gaps = 47/389 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG +SH ++ +G E D + PL H G+ +
Sbjct: 210 IQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLSEHDRLVIPVPLYHCFGMVMGNLGCL 269
Query: 130 VGACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ P F+ S L+AV + T L VP + +A L ++ S++ +
Sbjct: 270 THGSTMIYPGDAFDPLSTLQAVAEERATVLYGVPTMF--IAELDHPRRAEFDLSSLRTGI 327
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK A++ AYGMTETS T DP
Sbjct: 328 MAGATCPIEVMKRVIEQMHMAEVQIAYGMTETSPVSTQSAADDPL--------------- 372
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSV 302
+ + VG+ PH+E K+ + + +G + TRG VML YW+ A
Sbjct: 373 -----ELRVASVGRTQPHLETKLVDEQGNVVPRGQIGELCTRGYSVMLGYWNNQEATQES 427
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ +GD+ +D+ G V +VGR I GGENVYP E+E L HP + + VVG
Sbjct: 428 IDEAKWMHSGDLAVMDEAGYVSIVGRNKDMIIRGGENVYPREIEEFLFGHPAVADVQVVG 487
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I +++ E V A V+L + DQ+ L++E L ++C+ + + FK PR
Sbjct: 488 IPDSKYGEEVAAWVKL---------HPDQA-------LTAEALAEYCKGR-IAHFKVPRH 530
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
F + FP+T TGK+++ +R + + L
Sbjct: 531 FRFVEE-FPMTVTGKVQKFRMRELMQAEL 558
>gi|398867497|ref|ZP_10622955.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
gi|398236773|gb|EJN22544.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
Length = 518
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 184/383 (48%), Gaps = 47/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV+ SH L ++A+ A V D + LH AP+ H+ LS + + +
Sbjct: 163 ILYTGGTTGRPKGVMQSHMNLWSAAVARAADVPVPADALTLHIAPMFHLAALSRVILISL 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
+G +F+P F++ + ++ +E+ +T ++ VP ++ L + G ++ + G
Sbjct: 223 LGLPSIFVPAFDALAVMQTIERERITDILIVPTMLQALIMHPEFARHDLG--CLRSLTYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ L++ A + P + YGMTE + P + G P+ N +
Sbjct: 281 ASPIAVPLLELALKALPNVEFTQGYGMTEAA----------PPISANG--PE---NHSAE 325
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVST 304
+ + G+P V +++ + + VG +L RG ++ML YW+ KP +
Sbjct: 326 GIANGRLRSAGRPGLGVTVRIVDEQDNEVPRGTVGEVLVRGPNIMLGYWN----KPEETA 381
Query: 305 GEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ W+ TGD +DD G +++V R I SGGENVY EVE+ + HP + V+
Sbjct: 382 QALRGGWMHTGDGAYMDDDGYLYIVDRFKDMIVSGGENVYSGEVESAIASHPAVAACAVI 441
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI A+ E V A V L+ D +++ +HCR + + G+K P+
Sbjct: 442 GIPCAQWGEAVHAVVVLK---------SDNEVAGAQII-------EHCR-RQIAGYKTPK 484
Query: 422 LFVLWRKPFPLTSTGKIRRDEVR 444
V +R PL+ GK+ + ++R
Sbjct: 485 -SVEFRTTLPLSGAGKVLKRDLR 506
>gi|167564616|ref|ZP_02357532.1| acyl-CoA synthetase [Burkholderia oklahomensis EO147]
gi|167571758|ref|ZP_02364632.1| acyl-CoA synthetase [Burkholderia oklahomensis C6786]
Length = 575
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 203/446 (45%), Gaps = 49/446 (10%)
Query: 14 ELQHTAIPSLRWHVSLGS-SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 72
EL +PSLR V++ + + ++ DML R + + I F
Sbjct: 163 ELHAARVPSLRTVVTMSDVAPAGMLSFADMLARGRAALDPARLDAIGATLDCRDPINIQF 222
Query: 73 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVG 131
TSGTTGSPKG ++H ++ + + +++ E D PL H G+ S +A + VG
Sbjct: 223 TSGTTGSPKGATLTHRNVVNNARSIASVMRLTEADAMCIPVPLYHCFGMVLSVLACMSVG 282
Query: 132 ACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
A VF FE + L AV T+L VP + +A L +++ + G
Sbjct: 283 AKMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAG 340
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P E MK + +++ AYGMTETS P +F + T +S
Sbjct: 341 SPCPIETMKRVVSKMHMSEVTIAYGMTETS-------------------PVSFQSSTTDS 381
Query: 251 VHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTG 305
+ + + VG+ PH+E K+ + V G + TRG VML YWD A+ +
Sbjct: 382 LEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVV 439
Query: 306 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 365
+ W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +
Sbjct: 440 DGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPD 499
Query: 366 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 425
++ E V A + LR +E LR+ CR + +K PR +V
Sbjct: 500 SKYGEEVCAWIVLRAGETMTEDE----------------LREFCR-GQIAHYKVPR-YVR 541
Query: 426 WRKPFPLTSTGKIRRDEVRREVMSHL 451
+ P+T TGK+++ +R ++ L
Sbjct: 542 FVDELPMTVTGKVQKFVMRERMIDEL 567
>gi|218782705|ref|YP_002434023.1| AMP-dependent synthetase and ligase [Desulfatibacillum alkenivorans
AK-01]
gi|218764089|gb|ACL06555.1| Long-chain-fatty-acid CoA ligase (AMP-forming) [Desulfatibacillum
alkenivorans AK-01]
Length = 516
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 186/406 (45%), Gaps = 51/406 (12%)
Query: 54 RSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA 113
+ +P A E II FTSGTTG PKG VISH S A + G D L
Sbjct: 153 KPVPEEFHPADEDPYIIIFTSGTTGRPKGAVISHKNSWAISKATTDMWGILHTDKVLCNM 212
Query: 114 PLCHIGGLSSAMA-MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR 172
P H+ G +A GA + +PKF+ L A+E++ ++ VP + LI
Sbjct: 213 PTSHVAGTHDLLAAQFYAGATGILMPKFDPMETLAAIEKYGISYFGGVPT----MYRLIF 268
Query: 173 VKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD 230
D SV+ + G EL+++ + +FP ++++++GM+ET+ TF T D
Sbjct: 269 KNADVTAHDLSSVRLAVLSGEPSSQELVQQVSQAFPNGRIVASFGMSETAGFFTFTTPDD 328
Query: 231 PTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRG 285
P P + +G KPAP E+K+ G+ VG + RG
Sbjct: 329 P----------------PERAEKTEG----KPAPGFEMKIVDLHGADLPVGEVGEMFVRG 368
Query: 286 AHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 345
V+ Y D K +V G+ W+ TGD+G +D+ G + +GR SGG NVYP+E+
Sbjct: 369 DSVINGYMDPEDDK-NVFMGDGWMATGDLGRLDEQGYLIFMGRIKEMYISGGYNVYPQEI 427
Query: 346 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 405
EA L +PG+ V+ + E+ VA V E D L E L
Sbjct: 428 EAFLNAYPGVNTSAVMETPDEVWGEIGVAFV-------IPEPGVD---------LDIEAL 471
Query: 406 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ HC+ K+L +K PR F++ P + GK+ + E+++ + +L
Sbjct: 472 KAHCK-KHLADYKRPRKFIVTDD-VPRSLIGKVVKKELKKNLDKYL 515
>gi|348170337|ref|ZP_08877231.1| AMP-binding domain protein [Saccharopolyspora spinosa NRRL 18395]
Length = 541
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 170/384 (44%), Gaps = 47/384 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG +SH ++ + GY EDD P H G+
Sbjct: 185 IQYTSGTTGFPKGATLSHHNILNNGFFVGELCGYTEDDRICIPVPFYHCFGMVMGNLAAT 244
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ IP F+ ++L +V TSL VP + +A L S++ +
Sbjct: 245 SHGAAMIIPATGFDPAASLASVAAERCTSLYGVPTMF--IAELDHPDFDSFDLSSLRTGI 302
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK+ + A++ YGMTETS ++ T D +LE
Sbjct: 303 MAGSPCPVEVMKQVIDRMGMAEVSICYGMTETSP-VSMQTRADDSLER------------ 349
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ VG+ PH+E+K+ + G TRG VML YW Q
Sbjct: 350 -------RVSTVGRVGPHLEVKIIDPATGLTVPRGTPGEFCTRGYSVMLGYWQQADTTAE 402
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ +D G V + GR + GGEN+YP E+E L HP I+ V+
Sbjct: 403 AIDAARWMHTGDLAVMDADGYVSITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVI 462
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + R E ++A +R+RE + L+ E LR+ C K L +K PR
Sbjct: 463 GVPDQRYGEELMAWIRMREGAK---------------ALTVEALREFCTGK-LAHYKIPR 506
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRR 445
+V FP+T TGKIR+ E+R+
Sbjct: 507 -YVHVVDEFPMTVTGKIRKVEMRQ 529
>gi|407790159|ref|ZP_11137255.1| AMP-binding domain protein [Gallaecimonas xiamenensis 3-C-1]
gi|407205174|gb|EKE75150.1| AMP-binding domain protein [Gallaecimonas xiamenensis 3-C-1]
Length = 558
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 198/445 (44%), Gaps = 50/445 (11%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
EL A+PSLR +++G + ++ D L D+ S +L +P+ + I FT
Sbjct: 152 ELDAQALPSLRHIITMGKARPGYL-AFDWLMGDLTAEDS--ALLDALDLSPQDPINIQFT 208
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGA 132
SGTTG+PKG +SH ++ + +G D PL H G+ ++ + GA
Sbjct: 209 SGTTGNPKGATLSHHNILNNAKLVGDAMGMSPADKLCIPVPLYHCFGMVLGSLLCVAHGA 268
Query: 133 CHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
VF + F++ S L+AV + T+L VP + +A L + S++ + G
Sbjct: 269 TAVFPAEAFDADSTLKAVSEERCTALHGVPTMF--IAELEHPQFDQFDLTSLRTGVMAGA 326
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P ELMK+ +++ AYG TE SS + +TL D LE + G V
Sbjct: 327 TCPVELMKKVIGKLHMEEVLIAYGQTE-SSPINHITLRDDPLE------KRIGTV----- 374
Query: 252 HQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGE 306
GK H E+K+ V G I R VML YWD +
Sbjct: 375 --------GKAGAHQEVKIVDAFGDEVPLGERGEICNRAYSVMLGYWDDPQKSAETVDQD 426
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
WL +GD+G +D G V +VGR I GGEN+YP E+E +HP + I V GI +
Sbjct: 427 GWLHSGDLGVMDQDGYVQVVGRIKDMIIRGGENIYPREIEEFYYRHPKVQDIQVFGIPDD 486
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E V A V LR Q +E +R E L+ FK PR F
Sbjct: 487 KYGEQVCAWVMLRSGQQ----------------ADAEEMRAFA-EGELSHFKIPRHFHFV 529
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHL 451
+P+T TGKI++ +R ++ L
Sbjct: 530 DN-YPMTVTGKIQKFRMRELMLQSL 553
>gi|296167449|ref|ZP_06849848.1| AMP-dependent synthetase and ligase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897197|gb|EFG76804.1| AMP-dependent synthetase and ligase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 503
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 185/396 (46%), Gaps = 43/396 (10%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
PE I+ FTSGTT PK V +SH+ L + G+ D L P HI G+ +
Sbjct: 144 PESVAIVLFTSGTTSQPKAVELSHNNLTSYVTGTVEFESAGDSDAALICVPPYHIAGVGA 203
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
A++ L G V++P F+++ + + VT+ VP ++ + + + S+
Sbjct: 204 ALSNLYAGRKMVYLPNFDAQEWIRLINAESVTTATVVPTMLDRIVAAL--ETGGHELPSL 261
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + GG + L++ A P ++AYG+TETSS++ +T D +A
Sbjct: 262 RNLAYGGSKVGLPLVRRALELLPHVGFVNAYGLTETSSTIAVLTPDD---------HRAA 312
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLA 298
+ V + + VG+P P +E+++ + G G + RG V RY
Sbjct: 313 HGASAAPVAR-RLASVGRPVPGIEIEIRDEDGNVLGPGQTGELFVRGEQVSGRYT----G 367
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
SV W T DI +D+ G +++ GR + I GGEN+ P E+E VL++HP + +
Sbjct: 368 IGSVLDENGWFPTKDIAMLDEDGYLFIGGRSDDTIIRGGENIAPAELEEVLVEHPHVRDV 427
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG+ + + + +VA V R + E LR+H R K+L G +
Sbjct: 428 AVVGVEDPQWGQAIVAVVVPRPGAEP----------------DPEELREHVR-KSLRGSR 470
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
P V++R P T TGK+ +RRE++ L+ L
Sbjct: 471 TPDR-VVFRDELPTTPTGKV----LRREIIEMLEGL 501
>gi|157692555|ref|YP_001487017.1| long-chain-fatty-acid--CoA ligase [Bacillus pumilus SAFR-032]
gi|157681313|gb|ABV62457.1| long-chain-fatty-acid--CoA ligase [Bacillus pumilus SAFR-032]
Length = 545
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 198/447 (44%), Gaps = 47/447 (10%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
++ TA P L+ V +G + + D + A + + P+ + + +T
Sbjct: 139 DITSTAFPYLKSVVYIGEHTPKGMRSWDSIQAAAKRTENDEWEKRMEELTPDDVINMQYT 198
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGA 132
SGTTG PKGV++SH+ ++ + + DD P H G + +A L G
Sbjct: 199 SGTTGYPKGVMLSHTNIVCNASQIGDCMKLTRDDRMCIPVPFFHCFGSVLGVLACLTKGG 258
Query: 133 CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
+ I F + L+ VE+ T L VP + +A L +++ + G
Sbjct: 259 TIIPIESFHPERVLQTVEKEKCTVLHGVPTMF--IAELDHPNFHKYNLSTLRTGIMAGSL 316
Query: 193 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 252
PS +MK +L AYG TE+S +T T D + E Q
Sbjct: 317 CPSHVMKAVIEQMGLKELTIAYGQTESSPVIT-QTRTDDSFERRVQ-------------- 361
Query: 253 QPQGVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 306
VG+ PH+E+K+ + G+ G + TRG HVM Y+ A V +
Sbjct: 362 -----TVGRALPHIEVKITAPGTPDEVLRGEQGELCTRGYHVMKGYYKNEEATNEVIDED 416
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
WL TGD+ +D+ G V + GR I GGENVYP+E+E VL HP I+ VVGI +
Sbjct: 417 GWLHTGDLAEMDEDGYVKITGRLKDMIIRGGENVYPKEIEDVLYTHPAILDAQVVGIPDE 476
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
E A +RL++ ++ E L +C+ + + +K P+ F +
Sbjct: 477 TYGEEAAAFIRLKQGHT----------------VTIETLTSYCQSQ-MARYKIPKYFFIT 519
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHLKS 453
+ +P+T++GKI++ ++++ + +K
Sbjct: 520 DE-YPMTASGKIQKFRLKKQALDLIKE 545
>gi|424858994|ref|ZP_18283008.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356661503|gb|EHI41814.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 519
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 180/381 (47%), Gaps = 46/381 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLA-KIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
+ +T GTTG KGV++SH L+ +L + A V L +P+ HI GL +
Sbjct: 171 LLYTGGTTGVSKGVMVSHRNLLTAALGTQAACQSVFPGGVNLVVSPMFHIAGLVAWATQN 230
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
++G VF+P F ++ LEA+++H VT++ VP ++ L V+ SVK +
Sbjct: 231 LLGGTQVFLPTFSPRAVLEAIQRHRVTTVGAVPVMLQMLVAHPDVES--YDLSSVKSVRY 288
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G + L++ A F + YGMTET+ + G+ A G+
Sbjct: 289 GASPISPTLLQRAMTVFRNSGFAQGYGMTETAH-----------ITVLGRDDHAAGSEVL 337
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
S G+ PH EL+V V G I+TRG HVML YW++ +V
Sbjct: 338 RSA--------GRALPHCELRVVDVDDREVSVGVLGEIVTRGDHVMLGYWNRPEETAAVL 389
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
W+ TGDIG +D G +++V R I +GGENVY EVE L HP + V+G+
Sbjct: 390 RNG-WMHTGDIGYVDRHGYLFVVDRIKDMIITGGENVYSTEVENALAAHPAVEACSVIGV 448
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ R E V + V LRE + ++ D+ LR H R + G+K PR
Sbjct: 449 PDTRWGERVHSVVVLREG---ARTDADE-------------LRAHVRGL-IAGYKVPRT- 490
Query: 424 VLWRKPFPLTSTGKIRRDEVR 444
V + P+++ GK+ + ++R
Sbjct: 491 VEFLDALPVSAAGKVLKRDLR 511
>gi|409393138|ref|ZP_11244621.1| putative fatty-acid--CoA ligase [Gordonia rubripertincta NBRC
101908]
gi|403197125|dbj|GAB87855.1| putative fatty-acid--CoA ligase [Gordonia rubripertincta NBRC
101908]
Length = 551
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 184/404 (45%), Gaps = 47/404 (11%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IG 119
S + + + I +TSGTTG PKG +SH + ++ Y DD P H G
Sbjct: 184 SLSADDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGELLDYTADDRICLPVPFYHCFG 243
Query: 120 GLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTW 177
+ +A GA V P F+ K+ L+AV ++ TSL VP + +A+LA L +
Sbjct: 244 MVMGNLAATSHGAAMVIPGPAFDPKATLDAVAEYRCTSLYGVPTMFIAELALLDAAPDGY 303
Query: 178 K-GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
S++ + G P ++M++ + +++ YGMTETS T + DP
Sbjct: 304 APDLSSLRTGIMAGSPCPEQVMRQVVDRMHMSEVSICYGMTETSPVSTQTRVDDPL---- 359
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVML 290
+ + VG+ PH+E+K+ + G+ + G + TRG VM
Sbjct: 360 ----------------ELRVTTVGQVGPHLEIKIVAPGTGETLGRNETGELCTRGYSVMT 403
Query: 291 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 350
YW+ + W+ TGD+ +DD G V + GR + GGEN+YP E+E L
Sbjct: 404 GYWNDPEKTAEAIDADGWMHTGDLAEMDDAGYVRITGRIKDMVIRGGENIYPREIEEFLY 463
Query: 351 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 410
HP I+ V+G+ + + E ++A VRLR + D + ++ ++ R
Sbjct: 464 THPDILDAQVIGVPDEKYGEELMAWVRLR------DHATDLTVEDVRAFADGKIARH--- 514
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
K PR +V K FP+T TGKIR+ +R E L+ L
Sbjct: 515 -------KIPR-YVHVVKEFPMTVTGKIRKVAMREEATHILEDL 550
>gi|264677845|ref|YP_003277751.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
gi|262208357|gb|ACY32455.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
Length = 518
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 186/388 (47%), Gaps = 45/388 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTGSPKGV++ H L +++ ++ + LH AP+ H+ + A+
Sbjct: 163 VFYTGGTTGSPKGVMLCHRNLYTNAISSVSSQIVRAGSIGLHAAPMFHLADGAFMNALFA 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G CHV +P+F+ + L+A+ VT + VP ++ L + K S++++ G
Sbjct: 223 AGGCHVMVPRFDPLAVLQAIASTGVTDTLLVPTMIQMLVDHPDLHK--YDLKSLRQMAYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL-ETPGQLP---QAFGN 245
+ L+ A + P + AYGMTE S T ++ P + PG+ ++ G
Sbjct: 281 ASPISEGLLDRAMRTIPDVDFVQAYGMTEVSPIATILS---PEMHREPGRAKGRHRSAGR 337
Query: 246 VTPNS---VHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSV 302
T + + P+ G+ P E VG I+ RG VML YW++ A+
Sbjct: 338 ATACTEVRIVDPE----GREVPRGE----------VGEIVVRGPGVMLGYWNK-PAETEA 382
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ + W+ TGD G +DD G V++V R I +GGENVY EVE+V+ HP + V+G
Sbjct: 383 AIRDGWMHTGDGGRMDDEGYVFVVDRIKDMIVTGGENVYSIEVESVIATHPAVASCAVIG 442
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + E V + L+ QS + +EL+ C+E+ + G+K PR
Sbjct: 443 IPHEHWGEQVHVFIVLKPG---------QSLEAQELI-------HFCKER-IAGYKCPR- 484
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSH 450
V + + PL+ GKI + +R +H
Sbjct: 485 DVSFVEAMPLSGAGKILKTSLRAPFWAH 512
>gi|392417372|ref|YP_006453977.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
gi|390617148|gb|AFM18298.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
Length = 487
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 192/425 (45%), Gaps = 56/425 (13%)
Query: 27 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHS---WAPEGAVI--ICFTSGTTGSPK 81
V G D+ D+ D+ + RS PF + W +GA I + FTSGTTG PK
Sbjct: 108 VQSGFLGQDYSLALDVPMIDLGSDFLCRSAPFERAPSEWL-DGADIADVIFTSGTTGRPK 166
Query: 82 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKF 140
G +++H + + E D YL P H GL + + A + GA V + F
Sbjct: 167 GAMMNHRQTLRAYEEWATLADLREGDRYLMINPFFHTFGLKAGLVASFLRGATMVPVAAF 226
Query: 141 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR-DSVKKILNGGGGLPSELMK 199
+ ++ V + +T L P + L T+ KGR +++ + G +P EL++
Sbjct: 227 DVDRVVDLVARESITMLPGPPTLYHSLLTVAD-----KGRLATLRAAVTGAADIPVELIR 281
Query: 200 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 259
+ P L++ YG+TE + TL PG P+ NV +
Sbjct: 282 RIRDELPFQTLMTGYGLTEAGNV---------TLSRPGDSPE---NVARTA--------- 320
Query: 260 GKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 319
G P VE+ + DG +L RG +VM Y D LA + WL TGD+G+ D
Sbjct: 321 GLPCEDVEVDIADDGE-----VLVRGYNVMQGYLDDPLATAEAIDEDGWLHTGDLGTFTD 375
Query: 320 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 379
G + +VGR+ GG N YP E+E LL+HPGI V+G+ + RL ++ A +
Sbjct: 376 EGRLCIVGRKKDMFIVGGFNAYPAEIEGFLLEHPGIAQAAVIGVPDERLGQVGKAFL--- 432
Query: 380 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 439
S+ QS LS++ + R + + GFK PR V + PL +TGK+
Sbjct: 433 -----VRSDAAQS-------LSADEVIDWSRAR-MAGFKVPR-SVEFLDELPLNATGKVM 478
Query: 440 RDEVR 444
+D ++
Sbjct: 479 KDRLQ 483
>gi|386360030|ref|YP_006058275.1| acyl-CoA synthetase [Thermus thermophilus JL-18]
gi|383509057|gb|AFH38489.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Thermus
thermophilus JL-18]
Length = 560
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 185/400 (46%), Gaps = 58/400 (14%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA-------IVGYGEDDVYLHT 112
H PE ++ +T GTTG KG +++H L+ L A +VG G V L
Sbjct: 200 HVPDPEDLALLQYTGGTTGLSKGAMLTHRNLVANVLQIDAWDPTSKDLVGKG---VMLGA 256
Query: 113 APLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLI 171
P H+ G++ AM L G V +P+ E K+ +EA+E+H VT VP +
Sbjct: 257 LPFFHVYGMTVAMNYGLFSGYKIVLLPRPEIKAIVEAIEKHQVTHFPGVPTLYVAFNNFP 316
Query: 172 RVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 231
++K + S++ L+G LP E+ K A+LI YG++E S +T +P
Sbjct: 317 SIEK--RNVKSIRICLSGAAPLPVEVAKR-FEELTGARLIEGYGLSEASP----VTHSNP 369
Query: 232 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGA 286
L G + S+ G P P V+ KV + VG + +G
Sbjct: 370 VL----------GLIKKGSI--------GMPFPSVDAKVVDEEGRELPPGEVGELAVKGP 411
Query: 287 HVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 346
+VM YW++ + + + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE
Sbjct: 412 NVMKGYWNR-PEETEKALKDGWLLTGDLAKMDEDGYFYIVDRKKDMIIAGGYNIYPREVE 470
Query: 347 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 406
VL QH + VVG+ + E V A + L+ +Q + D +
Sbjct: 471 EVLYQHEAVQEAAVVGVPDPYRGETVAAFIVLKPEYQNKVTEKD--------------IE 516
Query: 407 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
CR+ NL +K PR+ + +R+ P +S GKI R E+R E
Sbjct: 517 TFCRQ-NLAAYKVPRI-IQFRESLPKSSVGKILRRELREE 554
>gi|153010019|ref|YP_001371234.1| AMP-dependent synthetase and ligase [Ochrobactrum anthropi ATCC
49188]
gi|151561907|gb|ABS15405.1| AMP-dependent synthetase and ligase [Ochrobactrum anthropi ATCC
49188]
Length = 562
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 206/446 (46%), Gaps = 59/446 (13%)
Query: 20 IPSLRWHVSLGSSSS-DFVNKRDML-TADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 77
+P+LR + +G+ + +N D+ + D + G L L + + I FTSGTT
Sbjct: 156 LPNLRCVIRIGAEQTPGMLNFDDVAQSGDEVTGQELAQL--AEELQFDDPINIQFTSGTT 213
Query: 78 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVF 136
GSPKG +SH ++ + E D P H G+ +A + G+C V
Sbjct: 214 GSPKGATLSHHNILNNGFFVGEAMQLSEQDRLCIPVPFYHCFGMVLGNLACVTHGSCMV- 272
Query: 137 IPK--FESKSALEAVEQHCVTSLITVPAI---MADLATLIRVKKTWKGRDSVKKILNGGG 191
IP F+ L+ VE+ T L VP + M D R T S++ + G
Sbjct: 273 IPNESFDPLLTLQTVEEEQCTGLHGVPTMFIAMLDHPDFSRFNLT-----SLRTGIMAGS 327
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P E+M+ + ++++ AYGMTETS P +F + T + +
Sbjct: 328 PCPIEVMRRVVSEMHQSEITIAYGMTETS-------------------PVSFQSSTTDPL 368
Query: 252 HQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 306
+ + VG+ PH+E+K+ +DG G +LTRG VM YW+ +
Sbjct: 369 ER-RVSTVGRIHPHLEVKIVDADGKVVPRGEKGELLTRGYSVMRGYWNDAESSAGAIDDA 427
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
W+ TGD+ +ID+ G +VGR I GGEN+YP E+E L HP I + + GI +
Sbjct: 428 GWMHTGDLATIDEEGYCNIVGRIKDLIIRGGENIYPREIEEFLFSHPAISDVQIFGIPDR 487
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E++ A V+L + Q SE E L ++CR++ + +K P + +
Sbjct: 488 KFGEIICAWVKLHKDGQLSE----------------EELAEYCRQR-IAHYKVP-AHIRF 529
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHLK 452
FP+T TGKI++ +R+ ++ L+
Sbjct: 530 VDQFPMTVTGKIQKFVMRQVMIEELE 555
>gi|421889438|ref|ZP_16320475.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum K60-1]
gi|378965202|emb|CCF97223.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum K60-1]
Length = 571
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 217/456 (47%), Gaps = 70/456 (15%)
Query: 15 LQHTAIPSLRWHVSLGSSSS-------DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGA 67
LQ +P+LRW + +G ++ + + + ++AD L + + +P+ A
Sbjct: 161 LQAAKLPALRWVIRMGEGATPGMINFGEVIARGQGVSADTLDAIA-------AALSPDDA 213
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQS-LAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAM 125
+ I FTSGTTG+PKG ++H ++ + +A+ G D + + PL H G+ S +
Sbjct: 214 INIQFTSGTTGAPKGATLTHVNVVNNARFVAMAMNLQGTDRLCI-PVPLYHCFGMVMSVL 272
Query: 126 AMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 182
A GAC VF + F+ + L V + T+L VP + +A L + ++G D S
Sbjct: 273 ACTATGACMVFPGEAFDPLATLRTVAEERCTALHGVPTMF--IAQLDHPE--FRGFDVSS 328
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + G P E+MK ++ AYGMTETS P +
Sbjct: 329 LRGGIMAGSPCPIEVMKRVVAEMHLREITIAYGMTETS-------------------PVS 369
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQF 296
F + + + + + VG+ PH+++K+ DG+ V G + T+G VML YWD
Sbjct: 370 FQSAVTDPLDK-RVTTVGRIQPHLQVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD- 426
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
AK + S + W+ TGD+ + D G +VGR + GGENVYP E+E L +HP +
Sbjct: 427 EAKTAESIHDGWMRTGDLATFDADGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQ 486
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ V G+ + + E V A + L+ Q +E E +R C + +
Sbjct: 487 AVNVFGVPDPKYGEEVCAWIVLKPGQQATE----------------EEIRAFC-QGQIAH 529
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+K PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 530 YKIPR-YICFVPEMPMTVTGKVQKFIMRERMIEALK 564
>gi|68536632|ref|YP_251337.1| AMP-binding protein [Corynebacterium jeikeium K411]
gi|68264231|emb|CAI37719.1| acyl-CoA synthetase [Corynebacterium jeikeium K411]
Length = 564
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 192/418 (45%), Gaps = 49/418 (11%)
Query: 46 DILKGYSLRSL-PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYG 104
D L +++ L P P+ + I +TSGTTG KG ++H ++ + Y
Sbjct: 179 DELANHAILDLNPVREQLHPDDPINIQYTSGTTGMAKGATLTHRNILNNGYLVGETLQYT 238
Query: 105 EDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPA 162
+ D + P H G + + + GA + P F +S LEAVE TSL VP
Sbjct: 239 DQDKVVIPVPFFHCFGMVMGNLGAITHGATTIIAGPVFNPQSVLEAVEHGKATSLFGVPT 298
Query: 163 I-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTET 219
+ MA+L + K K D S++ + G P+ M++ + ++ AYGMTET
Sbjct: 299 MFMAELDEIEHAKAKGKTYDLSSLRTGIMSGTACPTRTMRQVMDIMNINEITIAYGMTET 358
Query: 220 SSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV- 278
S + TL D +E + G VG+P PH+E+K+ +
Sbjct: 359 SP-VNHQTLVDDPIE------KRVG-------------TVGRPNPHIEVKIVDPETGETV 398
Query: 279 -----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRI 333
G IL RG VM YWD + W+ +GD+G++D+ G + GR +
Sbjct: 399 KRGEQGEILIRGFLVMQGYWDMPGKTADAIDEDGWMHSGDLGTMDEEGYARITGRAKDMV 458
Query: 334 KSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSS 393
GGEN+YP E+E L+ HP I + VVG+ + + E ++A + +RE + DQ++
Sbjct: 459 IRGGENLYPREIEEFLMTHPDISDVQVVGVPDEKYGEELMAFIIMREDTE----PLDQAA 514
Query: 394 KNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+R C + LT K P+ +V + FP+T +GK+R+ E+R + L
Sbjct: 515 -----------VRDFC-DGELTRHKIPK-YVECVESFPMTLSGKVRKVELREHAVELL 559
>gi|288922476|ref|ZP_06416661.1| AMP-dependent synthetase and ligase [Frankia sp. EUN1f]
gi|288346175|gb|EFC80519.1| AMP-dependent synthetase and ligase [Frankia sp. EUN1f]
Length = 525
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 176/380 (46%), Gaps = 53/380 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM- 127
++ +TSGTTG+PKGV ++HS L+ +L + DD+ L PL H G + M
Sbjct: 173 VVLYTSGTTGNPKGVELTHSNLVHNALMCGRLFNVQADDIQLVALPLFHTFGQTVHMNCG 232
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA V +P+F ++ AL+ +E+ VT + VP + A L V T +V+ L
Sbjct: 233 FATGATLVLLPRFTAEKALDLIERENVTVFVGVPTMY--WALLNHVATTGYDASAVRANL 290
Query: 188 N----GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
GG LP E++ F ++ YG++ETS TF L P PG
Sbjct: 291 RLAVAGGSSLPMEVLTSFEERF-GVPVLEGYGLSETSPVATFNRLDRP--RRPGS----- 342
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 298
+G P VE+++ D S+ G I RG +VM Y ++ A
Sbjct: 343 ---------------IGLPVWGVEIRISRDDSTEAAVDEPGEICVRGHNVMKGYLNRPEA 387
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ W TGDIG+ D G +++V R+ I GG NVYP EVE VLL HP +
Sbjct: 388 TAEAIDPQQWFHTGDIGTRDADGYIYVVDRKKDMIIRGGFNVYPREVEEVLLTHPAVSLA 447
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+G+ + E V A V LR D + KEL+ CRE + +K
Sbjct: 448 AVIGVPHPSHGEEVKAFVVLR---------ADAEATEKELV-------DWCREV-MAAYK 490
Query: 419 APRLFVLWRKPFPLTSTGKI 438
PR+ V + + P+T+TGKI
Sbjct: 491 YPRI-VEFMESLPMTATGKI 509
>gi|226311685|ref|YP_002771579.1| acyl-CoA synthetase [Brevibacillus brevis NBRC 100599]
gi|226094633|dbj|BAH43075.1| long-chain-fatty-acid--CoA ligase [Brevibacillus brevis NBRC
100599]
Length = 521
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 181/387 (46%), Gaps = 50/387 (12%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
E V I +TSGT PKGV+++H ++I + ++ I G +DDV +H PL H L
Sbjct: 170 EDVVQILYTSGTESKPKGVMLTHKSIISEYVSTIIEGGMTQDDVAVHALPLFHSAQLHCF 229
Query: 125 MA-MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
+ + +G + + + L+ VE + T L P + +A L + S+
Sbjct: 230 LGPYVYLGGSGIILEQATPALMLQTVETYKATQLFCPPTVW--IALLRSPDFAARNLSSL 287
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+K G +P E++KE P A+ + YG TE + T + D + PG
Sbjct: 288 QKCYYGAAIMPVEVLKELGKRLPNAQFYNFYGQTEVAPLATVLQPKD-QMRKPG------ 340
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFL 297
GKPA +VE K+ D + V G I+ R +H ML Y+ D+
Sbjct: 341 --------------SAGKPALNVETKIVDDDGNEVPRGSVGEIVHRTSHAMLGYFRDEEK 386
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ + G W +GD+G +DD G + +V R+ IKSGGENV EVE ++ QHP +
Sbjct: 387 TQAAFQGG--WFHSGDLGIMDDEGYITVVDRKKDMIKSGGENVASREVEELIYQHPKVSE 444
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ V+G+ + E V A V K ELL + E+L C+++ L+ F
Sbjct: 445 VAVIGVPHPFWIEAVTAVV---------------VPKAGELLTADEML-AFCKDR-LSSF 487
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVR 444
KAP+ +V+ P +GKI + E+R
Sbjct: 488 KAPK-YVVIADNLPRNPSGKILKRELR 513
>gi|170585217|ref|XP_001897382.1| AMP-binding enzyme family protein [Brugia malayi]
gi|158595208|gb|EDP33778.1| AMP-binding enzyme family protein [Brugia malayi]
Length = 631
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 184/389 (47%), Gaps = 45/389 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA-PLCHIGG-- 120
P+ V I +TSGTTG PKG ++H ++ + GY E + PL H G
Sbjct: 242 PDDPVNIQYTSGTTGQPKGATLTHHNVVNNAYFVGRRAGYNEKRTIICIPNPLYHCFGCV 301
Query: 121 LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ S A + + C P F++ +AL+A+ + T++ P + D+ + K+
Sbjct: 302 MGSLSACVHLQTCVFPAPSFDALAALQAIHEERCTAVYGTPTMYIDMLNHPQYKQY--DC 359
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
S+ G P L + + L YG TETS ++FM+L D E P +
Sbjct: 360 TSITSGFVAGAPCPIALCQRLVSELGMRDLQVCYGTTETSP-VSFMSLRD---EQPEERI 415
Query: 241 QAFGNVTPN---SVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFL 297
++ G + + +V +G+ + + G +L RG VM YW+
Sbjct: 416 KSVGYIMDHLESAVVDSEGIILPR--------------GERGEVLVRGYSVMKYYWNNER 461
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
T + W TGDIG I + G++ +VGR+ I GGEN+YP E+E L +HP I
Sbjct: 462 QTKEEITADRWYHTGDIGVIHENGSLSIVGRKKDMIVRGGENIYPLEIEQYLFRHPKIED 521
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG+ + R E+V A +RLR+S ++ E +R C+ + + F
Sbjct: 522 VQVVGVPDERYGEVVCAWIRLRDSAG---------------DITEEDIRDFCKGR-IAHF 565
Query: 418 KAPRLFVLWRK--PFPLTSTGKIRRDEVR 444
K PR ++L++K FPLT TGKI++ E+R
Sbjct: 566 KIPR-YILFKKENEFPLTVTGKIKKYEIR 593
>gi|160900258|ref|YP_001565840.1| AMP-dependent synthetase/ligase [Delftia acidovorans SPH-1]
gi|160365842|gb|ABX37455.1| AMP-dependent synthetase and ligase [Delftia acidovorans SPH-1]
Length = 520
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 181/381 (47%), Gaps = 43/381 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG PKGV++SH L + +L+ + V V + P+ H+ G A+ M
Sbjct: 165 VMYTGGTTGRPKGVMLSHDNLFINALSNASNVPRQHVKVGMVVTPMFHVAGCGLALLMAQ 224
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
V +P F+ + L ++QH V L VP ++ L R+ + S++ +L G
Sbjct: 225 RLVPQVIVPAFDELAILAGIQQHGVNELFLVPTMIRRLIEHPRLAEF--DLSSLRLMLYG 282
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ + L++ A P A AYGMTE S ++ M P PG PQ
Sbjct: 283 AAPIDATLLERAMQLLPGADFAQAYGMTELSPTIVSM---GPAEHRPG--PQ-------- 329
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPSVS 303
+ G+P E+++ DG VG I RG VM YW++ A+ + +
Sbjct: 330 --RERLLRAAGRPVTIAEVRIV-DGEGRELPPGEVGEITARGPMVMQGYWNR-PAETAAA 385
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W+ TGD+G +D G +++V R I SGGENVY EVE + Q + V+G+
Sbjct: 386 LKDGWMHTGDMGRLDADGYLFVVDRLKDMIVSGGENVYSAEVENAIAQLSQVAMCAVIGV 445
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ R E V A + RE +E +EV+ HCRE+ + G+K PR
Sbjct: 446 PDERWGERVHAVIVAREGQPLTE---------------AEVI-AHCRER-IAGYKCPR-S 487
Query: 424 VLWRKPFPLTSTGKIRRDEVR 444
V +R PL++ GK+++ ++R
Sbjct: 488 VEFRAELPLSAAGKLQKFQLR 508
>gi|344174659|emb|CCA86464.1| putative o-succinylbenzoate--CoA ligase [Ralstonia syzygii R24]
Length = 497
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 175/389 (44%), Gaps = 47/389 (12%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS- 122
P+ + +TSGTT PKGV+ ++S +S A I +G DD L PL H+G
Sbjct: 148 PDTLFRLMYTSGTTARPKGVMQTYSNFYWKSFAHIVALGLTRDDKLLVCGPLYHVGAYDL 207
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+A+L+VG +F+ AL A+ +T P +++ + L K G S
Sbjct: 208 PGVAVLLVGGMLCIQREFDPAQALLAIGAERLTGAWLAPVMLSRI--LASAKSQEFGISS 265
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ ++ GG P + + +FP A+ I AYG+TET S T M PG+ Q
Sbjct: 266 LRWVIGGGERTPEARILDFAEAFPVARYIDAYGLTETCSGDTMME--------PGRERQK 317
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSSHV----GRILTRGAHVMLRYWDQFL 297
G+ G+P P+V +++ S DG + + G I RG V YW +
Sbjct: 318 IGST-------------GRPVPYVAIEIRSEDGRTLLPGEHGEICIRGPKVTPGYWKEPE 364
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
SV W TGD+G +D+ G ++L R I SGGEN+ EVE VL P I
Sbjct: 365 RTASVFYPNGWFRTGDVGYLDEDGFLYLTDRLKDMIISGGENIASSEVERVLYLLPQISE 424
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
V +G+ + R E V A V LR SE + HCR L GF
Sbjct: 425 AVAIGLPDERWGEQVAAVVVLRPGATLSEQE----------------MMSHCRSL-LAGF 467
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
K PR ++ P T +GK+ + +R +
Sbjct: 468 KVPRRLII-TDTLPRTPSGKVLKRVLREQ 495
>gi|119964094|ref|YP_948746.1| long chain fatty acid-CoA ligase [Arthrobacter aurescens TC1]
gi|119950953|gb|ABM09864.1| putative long chain fatty acid-CoA ligase [Arthrobacter aurescens
TC1]
Length = 558
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 184/397 (46%), Gaps = 49/397 (12%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS- 122
P + + +TSGTTG PKG ++H ++ + ++ Y E D + P H G+
Sbjct: 200 PYDPINLQYTSGTTGFPKGATLTHHNILNNGHSIGRLLNYTEHDRVVIPVPFYHCFGMVI 259
Query: 123 SAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ L GA + IP F + +ALEAV+ TSL VP + +A L
Sbjct: 260 GNLNALSFGAATI-IPGRGFNASAALEAVQDFGGTSLYGVPTMF--IAELALPDFASYDL 316
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
+++ + G P E+M+ + + YGMTETS T MT TLE
Sbjct: 317 STLRTGVMAGSLCPIEVMRRVIDEMHMVDVAICYGMTETSPVST-MTRAGDTLEQ----- 370
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 294
+ VG+ PH+E ++ GS V G + TRG VM YW
Sbjct: 371 --------------RTSTVGRTMPHLESRIIDPGSMEVVERGVIGELCTRGYSVMQGYWG 416
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
Q E W+ TGD+ +D+ G + + GR + GGEN+YP E+E L HP
Sbjct: 417 QPDKTAEAIDAEGWMHTGDLARMDEDGYLVIEGRIKDMVIRGGENIYPREIEEFLYLHPS 476
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
I + V+G+ + + E ++AC+ L K L++E L ++CR K L
Sbjct: 477 IQDVQVIGVPDEKYGEELMACIIL---------------KPGSPALTAEELAEYCRGK-L 520
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+K PR +V R+ FP+T +GK+R+ ++R+E +S L
Sbjct: 521 AHYKIPR-YVDVRESFPMTVSGKVRKVDMRQEAVSRL 556
>gi|333989012|ref|YP_004521626.1| fatty-acid--CoA ligase [Mycobacterium sp. JDM601]
gi|333484980|gb|AEF34372.1| fatty-acid-CoA ligase [Mycobacterium sp. JDM601]
Length = 464
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 180/384 (46%), Gaps = 42/384 (10%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS- 122
P+ +I +TSGTTG PKG +++H+ L ++ + + DV L APL HIGGL+
Sbjct: 111 PDDIAVIMYTSGTTGRPKGAMLTHANLFWNNINALLSFDTSQQDVSLVCAPLFHIGGLNV 170
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+ + L G V +P F+ AL+ + +H VT++ VPA+ +A L + S
Sbjct: 171 TTLLTLQKGGRIVLMPAFDPVEALKLIAEHRVTTMFGVPAMFLFMAQLPQFAAA--DLSS 228
Query: 183 VKKILNGGGGLPSELM-KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
V+ + GG +P L+ + P A+ YG+TET+ + L T E ++
Sbjct: 229 VRYFVCGGAPVPEALIHRYGERDIPFAQ---GYGLTETAP----LALVLRTDEVGVKIGA 281
Query: 242 AFGNVTP-NSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKP 300
A V P + V V PA G+ G I RG VM YW A
Sbjct: 282 AGNQVLPLSDVRLVDANNVPVPA----------GTR--GEICVRGPQVMAGYWRNPEATA 329
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+V + W TGDIG DD G +W++ R + SGGENVYP EVE VL HP + + V
Sbjct: 330 AVIDAQGWFHTGDIGQADDEGYIWVIDRVKDMVISGGENVYPAEVEDVLYGHPAVAEVAV 389
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G + + E V A V LR L+ + LR R+K L FK P
Sbjct: 390 LGTPHEKWGEAVTAVVALRPGAT----------------LALDELRAFARDK-LAAFKLP 432
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVR 444
+ + + P T +GK+ + ++R
Sbjct: 433 -IRLEFVDALPRTQSGKVVKYQLR 455
>gi|456013530|gb|EMF47179.1| O-succinylbenzoic acid--CoA ligase [Planococcus halocryophilus Or1]
Length = 474
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 188/407 (46%), Gaps = 49/407 (12%)
Query: 38 NKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAK 97
+ R +L +++ S++ P WA + + I +TSGTTG PKGV + +++
Sbjct: 114 DSRVVLFSEVENAKSIQFEP-QQQWAKDRTLSIMYTSGTTGHPKGVRQTAENHFSSAVSS 172
Query: 98 IAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSL 157
+G +DV+L PL HI G S M L+ G KF++ + E + VT +
Sbjct: 173 ALNIGIAPEDVWLCAVPLFHISGFSILMRSLIYGMGVRLYEKFDADQSAEEICNGSVTHM 232
Query: 158 ITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 217
V + + T + + + + D K +L GGG +P MK A N ++ YGMT
Sbjct: 233 SVVGVTLERILTSVE-QASMQASDRFKAVLAGGGPIPIAYMKRAKNC--GIPVLQTYGMT 289
Query: 218 ETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH 277
ETSS T + + D + G+ GKP E+K G
Sbjct: 290 ETSSQTTTLQVADAE--------RKIGSA-------------GKPLFLYEVKTEKPG--E 326
Query: 278 VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGG 337
VG IL RG V Y +F + G WL TGD+G +D G +++V RR+ I SGG
Sbjct: 327 VGEILIRGPQVTPGYIGKFAERDVQQDG--WLHTGDMGYLDAEGFLFVVDRRSDLIVSGG 384
Query: 338 ENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKE 397
ENVYP E+E VL HP I + V G + + E+ VA V L+ Q + +E
Sbjct: 385 ENVYPAEIEKVLSGHPAIQEVGVCGAPSEQWGEVPVAFVVLQ-----------QETTVEE 433
Query: 398 LLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
LL +CRE+ L +K P+ + + P ++ K+ R E+R
Sbjct: 434 LL-------AYCREQ-LASYKVPKQLTI-VESLPRNASNKLLRRELR 471
>gi|428223073|ref|YP_007107243.1| o-succinylbenzoate--CoA ligase [Synechococcus sp. PCC 7502]
gi|427996413|gb|AFY75108.1| O-succinylbenzoate-CoA ligase [Synechococcus sp. PCC 7502]
Length = 511
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 189/381 (49%), Gaps = 38/381 (9%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYG-EDDVYLHTAPLCHIGGLSSAMAML 128
+ +TSGTTG PKGV +++ ++A +G + D +L+ PL HIGGLS +
Sbjct: 161 VIYTSGTTGLPKGVQLTYKNHYASAIASAQHLGINPKSDRWLNCLPLYHIGGLSIIWRSV 220
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ G V +P+F+ EA+ +T + VP ++ + + ++ IL
Sbjct: 221 IWGIPMVLLPRFDIAEVCEAIANQAITFISLVPTMLVRILYSPEFQANLLAWQKLQGILL 280
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
GG +L+ + + ++ YG+TE SS +T + D L+ G +A G
Sbjct: 281 GGAAASPDLLDKCLKY--QLPIMPTYGLTEASSQVTTLLTKDILLKN-GSSGKALG---- 333
Query: 249 NSVHQPQGVCVGKP-APHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
+Q + VC+ P E+ G +G+I+ RG +VM Y L P + G
Sbjct: 334 --CNQVRIVCLDDPTGDQTEM-----GIGAIGQIMVRGENVMKGY----LHHPDL--GIN 380
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
WL+TGD+G +D G ++++ RR+ I SGGEN+YP E+EA+L +HP I VVGIA+
Sbjct: 381 WLNTGDVGYLDADGFLYVLNRRSDLIISGGENIYPTEIEAILAKHPQIQTACVVGIADKE 440
Query: 368 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLW 426
E+VVA ++L +S N E+ L +R+ C + L +K P +L+++
Sbjct: 441 WGEIVVAVLQLI-----------KSETNLEINLGE--VRKFCEDAGLARYKLPQKLYIV- 486
Query: 427 RKPFPLTSTGKIRRDEVRREV 447
T+ GK+ R VR +
Sbjct: 487 -NAMTTTANGKVSRKLVREAI 506
>gi|257057367|ref|YP_003135199.1| AMP-binding domain-containing protein [Saccharomonospora viridis
DSM 43017]
gi|256587239|gb|ACU98372.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora viridis DSM 43017]
Length = 552
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 174/390 (44%), Gaps = 47/390 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E D P H G+ +A
Sbjct: 191 IQYTSGTTGFPKGATLSHHNILNNGFFVGELCRYTEVDRICLPVPFYHCFGMVMGNLAAT 250
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GAC V P F+ L AV+ TSL VP + +A L S++ +
Sbjct: 251 THGACMVIPAPSFDPAKTLAAVQAERCTSLYGVPTMF--IAELAEPDFDSYDLSSLRTGI 308
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK+ ++ YGMTETS ++ T D ++E
Sbjct: 309 MAGSPCPVEVMKQVIERMGMTEVSICYGMTETSP-VSMQTRVDDSIER------------ 355
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ VG+ PH+E K+ + G + TRG VML YW+Q
Sbjct: 356 -------RVSTVGRVGPHLEAKIIDPETGLTVPRGTHGELCTRGYSVMLGYWEQPDKTAE 408
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
V W+ TGD+ +D+ G V + GR + GEN+YP E+E L HP I+ V+
Sbjct: 409 VIDEARWMHTGDLAVMDEDGYVNITGRLKDMVIRDGENIYPREIEEFLYTHPDILDAQVI 468
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + R E ++A VR+RE + L++E LR+ C K L +K PR
Sbjct: 469 GVPDERYGEELMAWVRMREGAE---------------PLTAESLREFCTGK-LAHYKIPR 512
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+V FP+T TGK+R+ E+R+ + L
Sbjct: 513 -YVHVVDEFPMTVTGKVRKVEMRKRAVELL 541
>gi|312140942|ref|YP_004008278.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
gi|311890281|emb|CBH49599.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
Length = 550
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 171/389 (43%), Gaps = 59/389 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-------- 121
I +TSGTTG PKG +SH ++ + GY E D P H G+
Sbjct: 197 IQYTSGTTGFPKGATLSHHNILNNGYFVGELCGYTEHDRVCIPVPFYHCFGMVMGNLACT 256
Query: 122 SSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
S AM++ G P FE + L AV+ TSL VP + +A L
Sbjct: 257 SHGAAMVIPG------PAFEPAATLAAVQAERCTSLYGVPTMF--IAELADPDFDSYDLS 308
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P E+MK+ A++ YGMTETS P
Sbjct: 309 SLRTGIMAGSPCPVEVMKQVIERMGMAEVSICYGMTETS-------------------PV 349
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQ 295
+ +S+ Q + VG+ PH+E+K+ + G + TRG VML YW+
Sbjct: 350 SLQTRRDDSIDQ-RVSTVGRVGPHLEVKIVDPATGLTVPRGEAGELCTRGYSVMLGYWNN 408
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
W+ TGDIG +D G V + GR + GGENVYP E+E L HP I
Sbjct: 409 PEKTSEAIDSARWMHTGDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDI 468
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ V+G+ +A+ E ++ +R+RE Q L + +R+ C + L
Sbjct: 469 LDAQVIGVPDAKYGEELMVWIRMREGAQ---------------PLDVDKVREFCTGR-LA 512
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+K PR +V FP+T TGKIR+ E+R
Sbjct: 513 HYKIPR-YVHLVDEFPMTVTGKIRKVEMR 540
>gi|397736506|ref|ZP_10503188.1| feruloyl-CoA synthetase [Rhodococcus sp. JVH1]
gi|396927696|gb|EJI94923.1| feruloyl-CoA synthetase [Rhodococcus sp. JVH1]
Length = 530
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 186/390 (47%), Gaps = 60/390 (15%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCHIGGLSSAMAM 127
+I +T+GTTG+PKG V+SHS ++ QS+ I + Y DD+ +P+ H+ L S M
Sbjct: 178 LILYTAGTTGTPKGAVLSHSNMVGQSITCIRAMRYDRGDDIGFLASPVFHVAALGSVAPM 237
Query: 128 LMVGACHVFIP--KFESKSALEAVEQHCVTSLITVP----AIMADLATLIRVKKTWKGRD 181
LM+G V P F L+ EQ +T++ VP A+ AD T +GRD
Sbjct: 238 LMLGGTTVIHPLKAFNPTEMLDVWEQERITTVFLVPVQWQAVCAD--------PTVRGRD 289
Query: 182 SVKKILNGGGGLPSE-LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
++++ G S+ +++ ++FP+A +++ +G TE S +T + D + G
Sbjct: 290 LALRVISWGAAPASDTVLRAMADTFPRALIVAVFGQTEMSP-ITCVLDGDDAIRKLG--- 345
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQ 295
VGKP P ++ +V D + V G I+ RG +ML YW
Sbjct: 346 -----------------SVGKPIPTIQTRVVDDDMNDVAPGTVGEIVYRGPTMMLEYWQN 388
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
A G W +GD+ DD G V++V R+ I SGGEN+Y EVE VL HP I
Sbjct: 389 PAATADAFAGG-WFHSGDLVRQDDEGFVYVVDRKKDMIISGGENIYCAEVENVLFGHPRI 447
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
VVG + + TE+ VA V L D+ S L+ E L +K L
Sbjct: 448 REAAVVGRPDPKWTEVPVAVVALD----------DEGSD-----LAVEELAAWLDDK-LA 491
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
+K P+ V+ P ++GK+ + E+R+
Sbjct: 492 RYKHPKDVVI-VDALPRNASGKVVKGELRK 520
>gi|300788951|ref|YP_003769242.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|384152427|ref|YP_005535243.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
gi|399540833|ref|YP_006553495.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
gi|299798465|gb|ADJ48840.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|340530581|gb|AEK45786.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
gi|398321603|gb|AFO80550.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
Length = 501
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 179/382 (46%), Gaps = 50/382 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAML 128
+ +TSGTT PKGV I+H L+ ++LA I G G DD L PL H+GGL + L
Sbjct: 159 LMYTSGTTSRPKGVPITHHNLLFKNLAHIVEFGLGRDDRTLVCGPLYHVGGLDLPGLGTL 218
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
G + KF++ ++ +E+ T++ P++M + L +++ + S++ I+
Sbjct: 219 HAGGSLHLVRKFDAAEVVDLIERERPTNIWLAPSMMNAILQLPGLRE--RDTSSLRFIIG 276
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
GG +P L++ +FP A AYG+TET + TF D L G
Sbjct: 277 GGEKMPVPLVQRIQEAFPTAWFADAYGLTETVAGDTFNDA-DHVLRKVG----------- 324
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAKPSV 302
VG+P H+ +++ + + V G I G V YW D+ ++
Sbjct: 325 ---------SVGRPVQHLRVRIVDEHDAEVPTGQLGEITLAGPKVFSGYWRDEEATTKAI 375
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
G W TGD+G +D+ G +++ R+ I SGGEN+ EVE VL +HP ++ VVG
Sbjct: 376 RDG--WFHTGDVGRLDEDGYLYVEDRKKDMIVSGGENIATPEVERVLYEHPDVVEAAVVG 433
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + R E+ A V R S D + L HCRE+ L FK P
Sbjct: 434 LPHERWGEVPQAFVVARPG-----SGLDAVT-----------LVAHCRER-LAKFKVP-A 475
Query: 423 FVLWRKPFPLTSTGKIRRDEVR 444
+ + P T +GK+ + ++R
Sbjct: 476 EIRFVDELPRTPSGKVLKRDLR 497
>gi|452855793|ref|YP_007497476.1| putative acyl-CoA synthetase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452080053|emb|CCP21814.1| putative acyl-CoA synthetase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 546
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 185/389 (47%), Gaps = 49/389 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLM 129
+TSGTTG PKGV++SH IV + A IA + D P H G + +A +
Sbjct: 197 YTSGTTGFPKGVMLSHFN-IVNNAANIAECMKLTSCDRLCIPVPFFHCFGCVLGVLACVS 255
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GA + I +F + L+ VEQ T+L VP + +A L + + V+ +
Sbjct: 256 AGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLNDSRFSEYDLSHVRTGIMA 313
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P+E+M+E + AYG TE S +T T D + E +
Sbjct: 314 GSPCPAEVMREVIGKMGMTGITIAYGQTEASPVIT-QTRTDDSFERRVE----------- 361
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVS 303
G+ PH+E+++ G+S G + TRG HVM Y+ A
Sbjct: 362 --------TAGRALPHIEVRIVRPGTSQEAARGEQGELCTRGYHVMKGYYKNQEATEEAI 413
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + + VVG+
Sbjct: 414 DKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGV 473
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E A +RL++ Q++ S+E +R C+E ++ +K PR +
Sbjct: 474 PDPKYGEEAAAWIRLKDG---------QTA-------SAEDIRTFCKE-HIARYKVPR-Y 515
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
VL+ +P+T++GKI++ ++R + + LK
Sbjct: 516 VLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|183983827|ref|YP_001852118.1| AMP-binding protein [Mycobacterium marinum M]
gi|183177153|gb|ACC42263.1| fatty-acid-CoA ligase FadD35 [Mycobacterium marinum M]
Length = 547
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 177/397 (44%), Gaps = 59/397 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKGV +SH ++ ++ Y +D P H G+ +A
Sbjct: 193 IQYTSGTTGFPKGVTLSHRNILNNGYLVGELLEYTAEDRICIPVPFYHCFGMVMGNLAAT 252
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI------MADLATLIRVKKTWKGRD 181
GAC V P F+ + L AV+ TSL VP + +AD AT
Sbjct: 253 SHGACMVIPAPGFDPAATLRAVQAERCTSLYGVPTMFIAELGLADFATY--------DLS 304
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P E+M++ + A + YGMTETS T
Sbjct: 305 SLRTGIMAGSTCPVEVMRKVIDQMHMAGISICYGMTETSPVAT----------------- 347
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 295
N Q + VG+ PH+E+KV + + G TRG VM YW
Sbjct: 348 ---QTRSNDSLQRRVTTVGRVGPHLEIKVVDPATGRIVPRGTAGEFCTRGYSVMSGYWKA 404
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
V E W+ TGD+ +D+ G V + GR + GGEN+ P E+E L HP I
Sbjct: 405 PERTAEVIDPEGWMHTGDLALMDECGYVQITGRIKDIVVRGGENISPREIEEFLHSHPDI 464
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ VVG+ + R+ E ++A V+LR L++ +LR++C +
Sbjct: 465 VDAHVVGVPDERMGEELMAVVKLRAGAPE---------------LTTGLLREYC-AGQIA 508
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
FK PR L + FP+T TGK+R+ E+R++ + +L+
Sbjct: 509 KFKIPRYLRLVDE-FPMTVTGKVRKVEMRQQAIEYLR 544
>gi|403727062|ref|ZP_10947447.1| putative acid--CoA ligase, partial [Gordonia rhizosphera NBRC
16068]
gi|403204118|dbj|GAB91778.1| putative acid--CoA ligase, partial [Gordonia rhizosphera NBRC
16068]
Length = 391
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 192/400 (48%), Gaps = 49/400 (12%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
+ +I +TSGTT +PKGV++ + L + ED+ L + P HI +++
Sbjct: 29 DAPAVIIYTSGTTAAPKGVLLRNENLTSYVFGSVEFANATEDEAALVSVPPYHIAAVANV 88
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 182
++ L G + + +F + L V VT+ + VP ++A R+ ++ +D +
Sbjct: 89 ISNLYAGRRTMVLEQFTPEQWLSTVRDEAVTNALVVPTMLA------RIVESEADKDIPT 142
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + GG +PS +++ A +P+ ++AYG+TETSS++ + P +A
Sbjct: 143 LRNLAYGGAPMPSRVIERALELWPQVGFVNAYGLTETSSTIAVL--------GPDDHREA 194
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFL 297
V+ ++ + + VG+P P V +++ ++ G VGRI G V Y
Sbjct: 195 M--VSDDASIRARLGSVGRPLPGVVIQIRAEDGELLGPLEVGRICVAGEQVSAEY----A 248
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
V+ + + DT D G +D G +++ GR + I G EN+ P E+E V+L+HP ++
Sbjct: 249 GIGRVTDEQGFFDTRDKGYLDADGFLFVGGRADDTIIRGAENIAPAEIEDVILRHPDVLD 308
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG+ + + + A V LR + + S VLR H R K L
Sbjct: 309 VAVVGVPDDEWGQRIEAAVVLRPGAE----------------VDSHVLRDHVR-KTLRSS 351
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 457
K P FV W + P T TGK+ VRR V+ L ++P +
Sbjct: 352 KTPDRFVYWNE-VPRTETGKL----VRRHVVDRLVNVPES 386
>gi|302383139|ref|YP_003818962.1| AMP-dependent synthetase and ligase [Brevundimonas subvibrioides
ATCC 15264]
gi|302193767|gb|ADL01339.1| AMP-dependent synthetase and ligase [Brevundimonas subvibrioides
ATCC 15264]
Length = 577
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 138/462 (29%), Positives = 206/462 (44%), Gaps = 54/462 (11%)
Query: 5 DESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAP 64
DE + W TA+P LR V++ + D + + + L G++ LP P
Sbjct: 154 DEIAPEWERNGGRTALPDLR-TVAVFPAEGD--GRAGATSFEDLHGFA-GELP---DGDP 206
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLH-TAPLCHIGG-LS 122
A I +TSGTTGSPKGVV++H L+ + + ED +H + P+ H+ G +
Sbjct: 207 AAAADIIYTSGTTGSPKGVVLTHDMLLRAAFGSAYARAF-EDGRRIHFSLPMNHVYGYVE 265
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+A L VG V KF+ ++ L AVE+H VT L+ +P + LA L + T S
Sbjct: 266 GLLAALFVGGAIVPHLKFDPRATLRAVERHRVTDLLLIPTMT--LAVLDALVDTPVDTTS 323
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT--LET----- 235
+K +L+ GG P L +F ++ + YGM+E ++S T DPT L+T
Sbjct: 324 LKGMLSSGGRTPPGLWDRILATFNGIEITTGYGMSECTASTTVTRPDDPTDRLQTTNGRL 383
Query: 236 ----PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLR 291
P P + V PQ V P VG ++ RG V
Sbjct: 384 RDVGPAGDPAIGHRIVDYRVVDPQSGAVLPPG-------------EVGELMARGPGVTAG 430
Query: 292 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
Y+D+ A E WL TGD+G ID G + LVGR + GGE V P E+E VL+
Sbjct: 431 YYDKPEATAEAFDAEGWLHTGDLGRIDADGYLSLVGRVKESYRCGGEQVTPSEIEDVLMV 490
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
HP ++ V + + R+ E+ VA V +R L + L C
Sbjct: 491 HPSVLQAHVAPVPDDRMGEVGVAFVVVRAGQA----------------LDPQALIDWCAG 534
Query: 412 KNLTGFKAPR-LFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ L FK PR + + + PLT +G+ R+ + R + L
Sbjct: 535 R-LARFKVPRHILPIGAEDVPLTPSGRPRKFLLSRMAIERLD 575
>gi|379059581|ref|ZP_09850107.1| AMP-binding domain protein [Serinicoccus profundi MCCC 1A05965]
Length = 543
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 187/403 (46%), Gaps = 52/403 (12%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
S P+ + I +TSGTTG PKG +SH ++ Y E DV P H G
Sbjct: 179 SLTPDQPINIQYTSGTTGFPKGATLSHRNILNNGYFVGEGCRYTERDVICIPVPFYHCFG 238
Query: 121 LSSA-MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKK-T 176
+ +A GAC V P F+ + L AV + TSL VP + +A+L + R + +
Sbjct: 239 MVMGNLAATTHGACMVIPGPGFDPAATLRAVREEQCTSLYGVPTMFIAELELIERSDEVS 298
Query: 177 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
+ SV+ + G P+ +M+ ++ + I YGMTETS T
Sbjct: 299 LEDLASVRTGIMAGSLCPASVMRTLIDAGVEEMTI-CYGMTETSPVST------------ 345
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVML 290
P+ + VG+ PH+E+++ + V G T+G VML
Sbjct: 346 --------QTAPDDPFDAKVGTVGRVMPHLEIQIVDPATREVVPRGTPGEFCTKGYSVML 397
Query: 291 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 350
YWD+ K + + W+ TGDIG +D+ G V + GR I GGENVYP EVE L
Sbjct: 398 GYWDE-PEKTAEVLQDGWMATGDIGVMDEDGYVEITGRIKDLIIRGGENVYPREVEEFLY 456
Query: 351 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 410
HP ++ VVG+ + R E ++A VRLRE + L++E ++ C
Sbjct: 457 THPDVVDAQVVGVPDERYGEELMAWVRLREGAE---------------PLTAEAVKDFCT 501
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR---REVMSH 450
+L +K PR V + FP+T TGK+R+ E+R E++ H
Sbjct: 502 -GSLAHYKIPR-HVQVIEEFPMTVTGKVRKVELRERGEELLRH 542
>gi|357021891|ref|ZP_09084122.1| long-chain-fatty-acid--CoA ligase [Mycobacterium thermoresistibile
ATCC 19527]
gi|356479639|gb|EHI12776.1| long-chain-fatty-acid--CoA ligase [Mycobacterium thermoresistibile
ATCC 19527]
Length = 493
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 180/378 (47%), Gaps = 47/378 (12%)
Query: 70 ICFTSGTTGSPKGVVISH--SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-A 126
I FTSGTTG PKG +++H S + + A +A + G D YL P H GL + + A
Sbjct: 160 IIFTSGTTGRPKGAMMNHLQSLRMYEEWATLADLREG--DRYLMINPYFHTFGLKAGLIA 217
Query: 127 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 186
+ GA V + F+++ ++ VE+ +T L P + L +R K +++
Sbjct: 218 SFLRGATMVPVAVFDAEQVVDLVERERITMLPGPPTLYHSLLA-VRDKDKLA---TLRAA 273
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
+ G +P EL++ + P L++ YG+TE + TL PG P+
Sbjct: 274 VTGAADIPVELIRRIRDELPFRSLMTGYGLTEAGNV---------TLSRPGDTPEQVAT- 323
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 306
G P VE+++ +DG +L RG VM Y D +
Sbjct: 324 -----------TAGLPCEDVEVRIAADGE-----VLVRGYGVMQGYLDDPAGTAQAIDPD 367
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
WL TGD+GS DD G + +VGR+ GG N YP E+E L++HP + V+G+ +
Sbjct: 368 GWLHTGDLGSFDDTGRLRIVGRKKDMFIVGGFNAYPAEIEGFLMEHPAVAQAAVIGVPDE 427
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
RL ++ A + L S + ++ +S+E + + R++ + G+K PR V +
Sbjct: 428 RLGQVGKAFIVLDASARRADGPT----------VSAEDIIEWSRQR-MAGYKVPR-HVEF 475
Query: 427 RKPFPLTSTGKIRRDEVR 444
R PL +TGK+ ++++R
Sbjct: 476 RDALPLNATGKVVKEQLR 493
>gi|443622955|ref|ZP_21107468.1| putative Dicarboxylate-CoA ligase PimA [Streptomyces
viridochromogenes Tue57]
gi|443343506|gb|ELS57635.1| putative Dicarboxylate-CoA ligase PimA [Streptomyces
viridochromogenes Tue57]
Length = 530
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/386 (32%), Positives = 174/386 (45%), Gaps = 49/386 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ ++ Y E D P H G+ +A
Sbjct: 181 IQYTSGTTGFPKGATLSHHNILNNGYFVGEMIAYSEQDRVCIPVPFYHCFGMVMGNLAAT 240
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GAC V P F+ K+ LEAV++ TSL VP + +A L S++ +
Sbjct: 241 SHGACMVIPAPSFDPKATLEAVQRERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGI 298
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK A++ YGMTETS T T D LE
Sbjct: 299 MAGSPCPVEVMKRVVTEMNMAEVSICYGMTETSPVST-QTRRDDDLE------------- 344
Query: 248 PNSVHQPQGVCVGKPAPHVELKVC------SDGSSHVGRILTRGAHVMLRYWDQFLAKPS 301
H+ VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 345 ----HRTG--TVGRVLPHIEVKVVDPVTGVTQPRGTAGELCTRGYSVMLGYWNEPEKTAE 398
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ + + G V +VGR I GGEN+YP E+E L HP I + VV
Sbjct: 399 AVDPGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADVQVV 458
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP- 420
G+ + R E V+ACV R+ L+ E LR C + L +K P
Sbjct: 459 GVPHERYGEEVLACVIPRDPGD---------------PLTLEELRAFC-DGQLAHYKIPS 502
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRRE 446
RL +L FP+T +GK+R+ E+R +
Sbjct: 503 RLRIL--DAFPMTVSGKVRKVELREK 526
>gi|374607457|ref|ZP_09680258.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
gi|373555293|gb|EHP81863.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
Length = 518
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 174/387 (44%), Gaps = 48/387 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-L 128
+ +TSGT PKGV+ S +LI ++ I DDV +H+ PL H L + +A +
Sbjct: 170 LMYTSGTESRPKGVMHSSRSLISNYVSTIVAGSMSSDDVEIHSMPLYHCAQLDNFLATDI 229
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+GA + +P+ + ++ L +EQH VT+ P I L + +++K
Sbjct: 230 YLGATSIILPRPDPEAVLRGIEQHQVTNYFAPPTIWISLLRSPLFDQV--DLSTLRKGYY 287
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G +P+E++ E P+ +L + YG TE + L A G
Sbjct: 288 GASAMPTEILHEIRERLPELQLWNFYGQTEMAP-----------------LASALGPTE- 329
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
Q G+PA +VE + D ++ V G I RG H+ML Y D
Sbjct: 330 ---QQDHAGAAGRPAVNVETVILDDTNTQVSPGTVGEIAHRGPHLMLGYLDDPEKTAEAF 386
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
G W +GD+G D+ G + +V R+ IK+GGENV EVE L QHPG+ + V G+
Sbjct: 387 LGG-WFHSGDLGYYDEHGLLHVVDRKKDMIKTGGENVASREVEEALYQHPGVQEVAVFGL 445
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
++ E VV+ V R ++L + L HCR + L GFK P+
Sbjct: 446 PHSTWVETVVSAVITRAG----------------VVLDEDELIGHCRAR-LAGFKTPKQ- 487
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSH 450
V + + P +GK+ + E+R H
Sbjct: 488 VFFVESLPKNPSGKLLKRELRLRFAGH 514
>gi|229090943|ref|ZP_04222167.1| Feruloyl-CoA synthetase [Bacillus cereus Rock3-42]
gi|228692344|gb|EEL46079.1| Feruloyl-CoA synthetase [Bacillus cereus Rock3-42]
Length = 496
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 187/393 (47%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE AL +E+H VT ++ VP I L + + T SV+
Sbjct: 210 FPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP E ++ + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCEYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TEETIQDG--WLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG + + E+ +A + K+ +L+ +V+ +HCR L +
Sbjct: 422 VAVVGRQHVKWGEIPIAFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ +++ K P +TGKI++ ++ ++ S
Sbjct: 465 KIPKE-IVFLKELPKNATGKIQKAQLTNQLKSR 496
>gi|389876556|ref|YP_006370121.1| acyl-CoA synthase [Tistrella mobilis KA081020-065]
gi|388527340|gb|AFK52537.1| acyl-CoA synthase [Tistrella mobilis KA081020-065]
Length = 527
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 187/403 (46%), Gaps = 51/403 (12%)
Query: 58 FTHSWAPEG-AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 116
F H + +G +I+ +TSGTTG PKGV++SH L + + + +DV L + PL
Sbjct: 160 FDHLASCDGDTLILYYTSGTTGVPKGVMLSHLNLFANAAGTGPLYEFSAEDVLLLSGPLF 219
Query: 117 HIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
H+G S L+ GA V P+F + ++ ++ VT++ VP ++ +I
Sbjct: 220 HLGTGSRVFTALVFGAGMVVQPRFRVEETMQLIQDCRVTTVTLVPTML----RMILDHPE 275
Query: 177 WKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 234
+ D S++ G +P LM+ A P YGMTE S L+ +T D
Sbjct: 276 FDRFDFSSIRCFTYGAAPMPVRLMERAIEKVPGVTFCQGYGMTEASPVLSVLTWKD---H 332
Query: 235 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVM 289
PG + F + VG+P + +L++ +DG VG I+ RG VM
Sbjct: 333 VPGS--RFFDKLG----------SVGRPIHYGDLRIVDADGRQLPVGEVGEIVIRGPQVM 380
Query: 290 LRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 346
YW+ +P + + + TGD G +D+ G ++L GR I SGGENVYP E E
Sbjct: 381 TGYWN----RPDETARAIRNGFYHTGDAGYLDEDGYLFLAGRTKEMIISGGENVYPIETE 436
Query: 347 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 406
L +HP + V G+ + E V A V L + + + EL+
Sbjct: 437 NCLSRHPAVAQCAVFGLPDELWGERVHAAVALHDGVE---------ADAAELI------- 480
Query: 407 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 449
CR + + FK+PR ++R+P PL+ T KI + +R ++
Sbjct: 481 AWCRSQ-IADFKSPRSIDIFREPLPLSPTNKIDKTLLRARALA 522
>gi|317126641|ref|YP_004100753.1| AMP-dependent synthetase and ligase [Intrasporangium calvum DSM
43043]
gi|315590729|gb|ADU50026.1| AMP-dependent synthetase and ligase [Intrasporangium calvum DSM
43043]
Length = 502
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 187/402 (46%), Gaps = 63/402 (15%)
Query: 56 LPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL---IVQSLAKIAIVGYGEDDVYLHT 112
LP A + +I +TSGTTG PKG ++H L +S + ++ EDDV +
Sbjct: 148 LPEPVERADDDTAVILYTSGTTGKPKGAELTHFNLHRNAARSSDDVMVMT--EDDVIMGC 205
Query: 113 APLCHIGGLSSAMAMLMVGACHV-FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLI 171
PL H+ GL+ + ++ C + IP+F+ ALE V + VT VP + A A L
Sbjct: 206 LPLFHVFGLTCGLNTSVLRGCTLTLIPRFDPAKALEVVGRDHVTIFQGVPTMYA--AMLN 263
Query: 172 RVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 231
S++ ++GG LP +M+ F A+++ YG++ETS +F P
Sbjct: 264 HPDADAAETSSLRTCVSGGSALPEAVMRNFEQKF-DAQILEGYGLSETSPVASFNMPDRP 322
Query: 232 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGA 286
T PG +G+ P E+K+ + DG+ +G I RG
Sbjct: 323 T--KPG--------------------TIGRAIPGCEMKLVNLDGTDTAPGEIGEIAIRGE 360
Query: 287 HVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPE 343
+VM YW KP + + W TGD+ ++D+ G +V R+ I GG NVYP
Sbjct: 361 NVMKGYW----GKPEATAEAIPDGWFRTGDLATVDEDGYFTIVDRKKDMIIRGGMNVYPR 416
Query: 344 EVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSE 403
EVE VL HP ++ VVGI + + E + A V L+ SE+ D+
Sbjct: 417 EVEEVLYTHPDVLEAAVVGIPDDVMGEEIGAAVALKPG---SETTLDE------------ 461
Query: 404 VLRQHCREKNLTGFKAPRLFVLWR-KPFPLTSTGKIRRDEVR 444
++++ +E+ + +K PR LWR P TGKI R EVR
Sbjct: 462 -VQEYVKER-IAAYKYPRR--LWRLDELPKGPTGKILRREVR 499
>gi|229155539|ref|ZP_04283647.1| Feruloyl-CoA synthetase [Bacillus cereus ATCC 4342]
gi|228627857|gb|EEK84576.1| Feruloyl-CoA synthetase [Bacillus cereus ATCC 4342]
Length = 496
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 182/393 (46%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQDNMFWNALNNTFAIDLTIHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE +AL +E+H VT ++ VP I L + SV+
Sbjct: 210 FPTLFAGGVIIVPRKFEPTTALSMIEKHKVTVVMGVPTIHQALVNCENFETA--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E N + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFIN---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP + + + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCDYVLIDENKNKVEIGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
K ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TKETIQDG--WLYTGDLARVDEEGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG R+ +W E+ K +L+ + + +HCR L +
Sbjct: 422 VAVVG----------------RQHVKWGETPIAFIVKKSNSVLTEKEVIEHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ +++ K P +TGKI++ ++ ++ S
Sbjct: 465 KIPKE-IIFLKELPKNATGKIQKAQLANQLKSR 496
>gi|260577833|ref|ZP_05845767.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
gi|258604060|gb|EEW17303.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
Length = 564
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 192/418 (45%), Gaps = 49/418 (11%)
Query: 46 DILKGYSLRSL-PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYG 104
D L +++ L P P+ + I +TSGTTG KG ++H ++ + Y
Sbjct: 179 DELANHAILDLNPVREQLHPDDPINIQYTSGTTGMAKGATLTHRNILNNGYLVGETLQYT 238
Query: 105 EDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPA 162
+ D + P H G + + + GA + P F +S LEAVE TSL VP
Sbjct: 239 DQDKVVIPVPFFHCFGMVMGNLGAITHGATTIIAGPVFNPQSVLEAVEHGKATSLYGVPT 298
Query: 163 I-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTET 219
+ MA+L + K K D S++ + G P+ M++ + ++ AYGMTET
Sbjct: 299 MFMAELDEIEHAKAKGKTYDLSSLRTGIMSGTACPTRTMRQVMDIMNINEITIAYGMTET 358
Query: 220 SSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV- 278
S + TL D +E + G VG+P PH+E+K+ +
Sbjct: 359 SP-VNHQTLVDDPIE------KRVG-------------TVGRPNPHIEVKIVDPETGETV 398
Query: 279 -----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRI 333
G IL RG VM YWD + W+ +GD+G++D+ G + GR +
Sbjct: 399 KRGEQGEILIRGFLVMQGYWDMPGKTADAIDEDGWMHSGDLGTMDEEGYARITGRAKDMV 458
Query: 334 KSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSS 393
GGEN+YP E+E L+ HP I + VVG+ + + E ++A + +RE + DQ++
Sbjct: 459 IRGGENLYPREIEEFLMTHPDISDVQVVGVPDEKYGEELMAFIIMREDAE----PLDQAA 514
Query: 394 KNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+R+ C +LT K P+ +V FP+T +GK+R+ E+R + L
Sbjct: 515 -----------VREFC-AGDLTRHKIPK-YVECVDSFPMTLSGKVRKVELREHAVELL 559
>gi|291436418|ref|ZP_06575808.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672]
gi|291339313|gb|EFE66269.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672]
Length = 541
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/436 (30%), Positives = 191/436 (43%), Gaps = 61/436 (13%)
Query: 21 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 80
P LR V +G S D LTA R + + V I +TSGTTG P
Sbjct: 149 PELRETVFIGDPSWD------ALTAGAATVPQERVEAIAAGLSCDDPVNIQYTSGTTGFP 202
Query: 81 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IP 138
KG +SH ++ +GY E D P H G+ +A GAC V P
Sbjct: 203 KGATLSHHNILNNGYWVGRTIGYTEQDRVCLPVPFYHCFGMVMGNLAATSHGACIVIPAP 262
Query: 139 KFESKSALEAVEQHCVTSLITVPAIMA---DLATLIRVKKTWKGRDSVKKILNGGGGLPS 195
F+ ++ LEAV++ TSL VP + +L R T S++ + G P
Sbjct: 263 SFDPEATLEAVQRERCTSLYGVPTMFIAELNLPGFARYDLT-----SLRTGIMAGSPCPV 317
Query: 196 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 255
E+MK ++ YGMTETS ++ T D +E H+
Sbjct: 318 EVMKRVVAEMHMEQVSICYGMTETSP-VSLQTRRDDDME-----------------HRTG 359
Query: 256 GVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 309
VG+ PH+E+KV + G + TRG VML YW++ V W+
Sbjct: 360 --TVGRVLPHIEVKVVDPATGTTRPRGSTGELCTRGYSVMLGYWNEPERTAEVVDAGRWM 417
Query: 310 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 369
TGD+ + + G V +VGR I GGEN+YP E+E L HP + + VVG+ + R
Sbjct: 418 HTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLHTHPEVADVQVVGVPHERYG 477
Query: 370 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRK 428
E V+ACV R+ + E LR CR++ L +K P RL +L
Sbjct: 478 EEVLACVVPRDPADPP---------------TLEDLRAFCRDR-LAHYKVPSRLQIL--D 519
Query: 429 PFPLTSTGKIRRDEVR 444
FP+T +GK+R+ E+R
Sbjct: 520 AFPMTVSGKVRKVELR 535
>gi|261419843|ref|YP_003253525.1| AMP-binding protein [Geobacillus sp. Y412MC61]
gi|297530199|ref|YP_003671474.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
gi|319766657|ref|YP_004132158.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
gi|261376300|gb|ACX79043.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC61]
gi|297253451|gb|ADI26897.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
gi|317111523|gb|ADU94015.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
Length = 544
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 181/392 (46%), Gaps = 47/392 (11%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-I 118
S P + + +TSGTTG PKGV+++H ++ + +G GE D P H
Sbjct: 182 ESLDPHDVINMQYTSGTTGFPKGVMLTHYNIVNNAHQVAQCMGLGEGDRLCIPVPFFHCF 241
Query: 119 GGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
G + S +A + VGA V + +F K LE VE T+L VP + +A L
Sbjct: 242 GCVMSTLACVTVGATMVPVVEFHPKRVLETVEAERCTALHGVPTMF--IAELNDPDFAKY 299
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
S++ + G P E+MK + AYG TE S +T DP LE +
Sbjct: 300 DLSSLRTGIMAGSPCPVEVMKAVIEKMGMKDITIAYGQTEASPVITQTRTDDP-LELRVE 358
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRY 292
VG+ P VE+K+ G++ G + TRG HVM Y
Sbjct: 359 -------------------TVGRALPGVEVKIVEPGTNKEVPRGVQGELCTRGYHVMKGY 399
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
++ A + WL TGD+ ++D+ G + GR I GGEN+YP E+E L +H
Sbjct: 400 YNNPEATNEAIDADGWLHTGDLATMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKH 459
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P I+ + VVG+ + E V+A + L++ ++E +R+ CR
Sbjct: 460 PKILDVQVVGVPDEVYGEEVMAWIILKDGET----------------ATAEEIREFCR-G 502
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
N++ K PR ++ + +P+T++GKI++ ++R
Sbjct: 503 NISRHKIPR-YIEFTDSYPMTASGKIQKFKLR 533
>gi|333915332|ref|YP_004489064.1| long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
gi|333745532|gb|AEF90709.1| Long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
Length = 564
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 196/445 (44%), Gaps = 52/445 (11%)
Query: 15 LQHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
L+ +PSL+ + +G+ + F+ D+L ++ SL A+ I FT
Sbjct: 153 LESAKLPSLKTVIQIGNGTVPGFMRFSDLLATGDPADQAVHSL--GARLRSTDAINIQFT 210
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 133
SGTTGSPKG ++H ++ + DD PL H G+ +
Sbjct: 211 SGTTGSPKGATLTHRNVLNNGFFIGEAMRLSPDDRLCIPVPLYHCFGMVVGNLAALTHGT 270
Query: 134 HVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
+ P FE+ S L AV+ T+L VP + +A L + +++ + G
Sbjct: 271 TIVYPNDAFEAVSVLRAVQDERCTALHGVPTMF--IAELDHPRFKEFDLSTLRTGVMAGS 328
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P E+MK N ++ AYGMTETS + T +TP
Sbjct: 329 PCPIEVMKRVVNEMHMGEVTIAYGMTETSPASC-----QSTTDTP--------------- 368
Query: 252 HQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTG 305
+ + +GK PH+ELKV S S VG + TRG VM YW+
Sbjct: 369 LEKRVSTIGKVLPHLELKVISPESGEILPVGAVGELCTRGYSVMRGYWEDAAKTSEAIDA 428
Query: 306 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 365
E W+ +GD+ +ID+ G V + GR + GGENVYP EVE L +HP I + V+G+ +
Sbjct: 429 EGWMHSGDLATIDEDGYVNIAGRIKDLVIRGGENVYPREVEEFLYRHPAIQDVQVIGVPD 488
Query: 366 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 425
+ E + A LR+ SE LR C+ + + +K PR ++
Sbjct: 489 QKYGEELCAWAILRDGATLSEDG----------------LRAFCKGQ-IAHYKIPR-YIR 530
Query: 426 WRKPFPLTSTGKIRRDEVRREVMSH 450
+ + FP+T TGKI++ V RE+M
Sbjct: 531 FVESFPMTVTGKIQK-FVMREMMKE 554
>gi|262275654|ref|ZP_06053463.1| putative long-chain-fatty-acid-CoA ligase [Grimontia hollisae CIP
101886]
gi|262219462|gb|EEY70778.1| putative long-chain-fatty-acid-CoA ligase [Grimontia hollisae CIP
101886]
Length = 980
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 187/401 (46%), Gaps = 54/401 (13%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 116
P ++ + +I +TSGTTG PKG ++H + + + + DD L T PL
Sbjct: 619 PVANNIEEQDTAVILYTSGTTGRPKGAQLTHRNMHSNARVAVGLSWLTADDTSLVTLPLF 678
Query: 117 HIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK 175
H G ++ M A ++VGA V +P+FE + L+ ++ H V+ VP + + +R
Sbjct: 679 HSFGQTAQMNACILVGASMVLVPRFEPGAVLQLMKDHRVSVFAGVPTMYIGILNYLRDND 738
Query: 176 TWKGRDSVKKIL----NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 231
D +K +L +GG LP ++ + +F L+ YG++ETS +F +
Sbjct: 739 V--SLDGIKGVLKMAMSGGSSLPVAILTQFDETF-NVPLLEGYGLSETSPIASFNHVDSD 795
Query: 232 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGA 286
L PG VG+P VE+KV + V G I RG
Sbjct: 796 RL--PG--------------------SVGQPVTGVEMKVVDVERNTVAVGELGEIAIRGP 833
Query: 287 HVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 346
+VM Y+++ A V + W +GDIG D+ N ++V R+ I GG NVYP E+E
Sbjct: 834 NVMRGYYNRPEATDEVLDIDGWFFSGDIGRRDERNNYFIVDRKKELIIRGGMNVYPREIE 893
Query: 347 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 406
VL++H + + V+G+A+ E V A V + + ++ L
Sbjct: 894 EVLIRHEKVAMVAVLGVADDTYGEEVKAYVVAHDGFD-----------------DADALI 936
Query: 407 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 447
+C+ + L +K PR + +R P+T+TGK+ + E++ EV
Sbjct: 937 AYCKSQ-LADYKYPR-HIEFRAQLPMTATGKLLKRELKAEV 975
>gi|302555107|ref|ZP_07307449.1| dicarboxylate-CoA ligase PimA [Streptomyces viridochromogenes DSM
40736]
gi|302472725|gb|EFL35818.1| dicarboxylate-CoA ligase PimA [Streptomyces viridochromogenes DSM
40736]
Length = 529
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 174/384 (45%), Gaps = 49/384 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ ++ Y E D P H G+ +A
Sbjct: 178 IQYTSGTTGFPKGATLSHHNILNNGYFVGELIAYTEQDRICVPVPFYHCFGMVMGNLAAT 237
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GAC V P F+ K+ L+AV++ TSL VP + +A L S++ +
Sbjct: 238 SHGACIVIPAPSFDPKATLDAVQRERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGI 295
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 296 MAGSPCPVEVMKRVVAEMHMAEVSICYGMTETSP-VSLQTRRDDDLE------------- 341
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPS 301
H+ VG+ PH+E+KV + G + TRG VML YWD+
Sbjct: 342 ----HRTG--TVGRVLPHIEVKVVDPATGVTQPRGTAGELCTRGYSVMLGYWDEPEKTAE 395
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ ++ + G V +VGR I GGEN+YP E+E L HPGI + +V
Sbjct: 396 AVDAGRWMHTGDLATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPGIQDVQIV 455
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP- 420
G+ + E V+ACV R+ + E LR C E L +K P
Sbjct: 456 GVPHEHYGEEVLACVIARDPADPP---------------TLEGLRAFC-EGRLAHYKIPS 499
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVR 444
RL +L FP+T +GK+R+ E+R
Sbjct: 500 RLQLL--DTFPMTVSGKVRKVELR 521
>gi|406575797|ref|ZP_11051487.1| AMP-binding domain protein [Janibacter hoylei PVAS-1]
gi|404554795|gb|EKA60307.1| AMP-binding domain protein [Janibacter hoylei PVAS-1]
Length = 543
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 195/445 (43%), Gaps = 59/445 (13%)
Query: 20 IPSLRWHVSLGSSS-SDFVNKRDMLTADIL--KGYSLRSLPFTHSWAPEGAVIICFTSGT 76
+P LR V +G S ++ V +T D L +G L P+ + I +TSGT
Sbjct: 146 LPDLRDVVYIGDPSWAELVAGGASVTEDQLAERGAGL---------TPDDPINIQYTSGT 196
Query: 77 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHV 135
TG PKG +SH ++ ++ Y E D P H G + +A GAC V
Sbjct: 197 TGFPKGATLSHHNILNNGYFVGELIRYTEADRICIPVPFYHCFGMVMGNLAATSHGACMV 256
Query: 136 F-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 194
P FE + L AV TSL VP + +A L S++ + G P
Sbjct: 257 IPAPSFEPAATLRAVVDERCTSLYGVPTMF--IAELGLRDFADYDLSSLRTGIMAGSTCP 314
Query: 195 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 254
E+MK A++ +YGMTETS ++ MT D L +
Sbjct: 315 VEVMKRVVAEMNMAEVAISYGMTETSP-VSTMTHTDDDLARRTE---------------- 357
Query: 255 QGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 308
VG+ PH+E KV + G + TRG VML YW Q W
Sbjct: 358 ---TVGRSMPHIESKVVDPVTGVTLPRGETGELCTRGYSVMLGYWQQPDKTAEAIDDARW 414
Query: 309 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 368
+ TGD+ ++D+ G V +VGR + GGEN+YP EVE L HP I + V+G+ + R
Sbjct: 415 MHTGDLATMDEHGYVEIVGRIKDLVIRGGENIYPREVEEFLYTHPSIADVQVIGVPDERY 474
Query: 369 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 428
E ++A V LRE L+ + +R+ +K L +K PR +V
Sbjct: 475 GEELMAWVVLREGVA---------------SLTVDDVREFAADK-LAHYKIPR-YVHVTD 517
Query: 429 PFPLTSTGKIRRDEVRREVMSHLKS 453
FP+T TGK+R+ E+R + L++
Sbjct: 518 AFPMTVTGKVRKVEMREQAGEILRA 542
>gi|226312168|ref|YP_002772062.1| acyl-CoA synthetase [Brevibacillus brevis NBRC 100599]
gi|226095116|dbj|BAH43558.1| probable O-succinylbenzoate--CoA ligase [Brevibacillus brevis NBRC
100599]
Length = 508
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 180/387 (46%), Gaps = 58/387 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAM 127
IIC+TSGTTG PKG V++ + S+ +A + +D + PL HIGG+ A
Sbjct: 162 IICYTSGTTGKPKGAVLTQENMFWNSVHNVAALDLTSEDCSIVLLPLFHIGGIGLFAFPT 221
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ G V KF+ A++ +E H VT ++ VPAI + T DSV+
Sbjct: 222 WLAGGRVVVAGKFDPDKAIQLIETHRVTIVMGVPAIHEAIRQSPLFATT--SFDSVRWFY 279
Query: 188 NGGGGLPSELMKE-ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
NGG P EL++ P + YG+TETS ++ FM + G
Sbjct: 280 NGGAPCPMELIQHFQERGLPFGQ---GYGLTETSPTV-FMIAKEDARRKAG--------- 326
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPS 301
+GKP E+++ SD G +G +L +G +VM YW+ +P
Sbjct: 327 -----------SIGKPVMFCEVRLISDDGKDVGQGEIGELLVKGPNVMKEYWN----RPE 371
Query: 302 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ + WL TGD+ D+ G ++VGRR I SGGEN+YP E+E V+ + G+
Sbjct: 372 ETANTIRDGWLYTGDLARFDEEGFAYIVGRRKDMIISGGENIYPLELEQVIGELDGVQEA 431
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG+ + + E+ A + + +E++ +++HC E+ L +K
Sbjct: 432 AVVGVPDEKWGEVAKAFIVPKSGAVITEAH----------------IKEHC-EQRLAKYK 474
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRR 445
P+ FV + P +TGKI + + R
Sbjct: 475 IPKSFVFLTE-LPRNATGKIVKQALTR 500
>gi|423403479|ref|ZP_17380652.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG2X1-2]
gi|423475873|ref|ZP_17452588.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG6X1-1]
gi|401648576|gb|EJS66171.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG2X1-2]
gi|402434705|gb|EJV66742.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG6X1-1]
Length = 496
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 186/392 (47%), Gaps = 54/392 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQKNMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE +AL +E+H VT ++ VP I L + + T SV+
Sbjct: 210 FPTLFAGGVIIIPRKFEPTTALSMIEKHKVTVVMGVPTIHQALINCAKFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E + + L +GMTETS P F
Sbjct: 268 WFYNGGAPCPEELMREFID---RGFLFGQGFGMTETS-------------------PTVF 305
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
++ H+ + GKP E + + + VG +L RG +VM YW++ A
Sbjct: 306 MLSEEDARHKVGSI--GKPVLFCEYVLIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ ++ G WL TGD+ +D+ G V+++GR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TEETIQDG--WLYTGDLAKVDEDGFVYIIGRKKDMIISGGENIYPLEVEQVINKISEVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG + + E+ +A + + S + +E KE++ +HCR L +
Sbjct: 422 VAVVGRQHVKWGEIPIAFIVKKSSSELTE---------KEVI-------EHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 449
K P+ V + P +TGKI++ ++ ++ S
Sbjct: 465 KLPKEIVFLEE-LPKNATGKIQKAQLANQLKS 495
>gi|384044534|ref|YP_005492551.1| o-succinylbenzoate--CoA ligase [Bacillus megaterium WSH-002]
gi|345442225|gb|AEN87242.1| O-succinylbenzoate-CoA ligase [Bacillus megaterium WSH-002]
Length = 487
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 197/399 (49%), Gaps = 56/399 (14%)
Query: 58 FTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH 117
F +W E I +TSGTTG+PKGV+ ++ S+ +G E D +L PL H
Sbjct: 138 FQKTWNLEETFTIMYTSGTTGNPKGVLQTYGNHWWSSVGSALNLGLNEKDCWLIAVPLFH 197
Query: 118 IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 177
I GLS M + G + +FE+++ EA+E VT + V ++++++ + +K
Sbjct: 198 ISGLSILMRSVFYGMKIILEERFEARAVNEAIENKGVTIISVVTSMLSNMLDELAERKY- 256
Query: 178 KGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG 237
++ + +L GGG P +++ N + + YGMTETSS F+TL +P
Sbjct: 257 --PNTFRCMLLGGGPAPLTILEACVNK--EIPVYQTYGMTETSSQ--FVTL------SPE 304
Query: 238 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG---SSHVGRILTRGAHVMLRYWD 294
+ G+ GKP E+K+ + + G I+ +G +V Y +
Sbjct: 305 DSLRKLGSA-------------GKPLFPCEMKIVDENGNETREAGEIIVKGPNVTKGYLN 351
Query: 295 QFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
+ A K ++ G W TGD+G +D+ G ++++ RR+ I SGGENVYP E+E VLL+HP
Sbjct: 352 KPEATKKAIQQG--WFYTGDVGKVDEEGFLYVLDRRSDLIISGGENVYPAEIENVLLKHP 409
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
+ V G+A+ + ++ AC+ + E+ +S E L H ++
Sbjct: 410 AVKEAGVTGVADEKWGQVPAACIVVNEN------------------VSDEELSLHI-QQF 450
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
L +K P+ FV + P T++ KI +RR++ S ++
Sbjct: 451 LAKYKLPKYFVRVEE-LPRTASNKI----IRRKLSSFIQ 484
>gi|423460128|ref|ZP_17436925.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG5X2-1]
gi|401141696|gb|EJQ49249.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG5X2-1]
Length = 496
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 181/393 (46%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTIHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE +AL +E+H VT ++ VP I L + + T SV+
Sbjct: 210 FPTLFAGGVIIIPRKFEPTTALSMIEKHKVTVVMGVPTIHQALINCAKFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP E + + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCEYVLIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TEETIQDG--WLYTGDLAKVDEDGFVYIVGRKKDMIISGGENIYPLEVEQVINKISEVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG R+ +W E KN L+ + + +HCR L +
Sbjct: 422 VAVVG----------------RQHVKWGEIPIAFIVKNSSSELTEKEVIEHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ V + P +TGKI++ ++ ++ S
Sbjct: 465 KLPKEIVFLEE-LPKNATGKIQKAQLANQLKSR 496
>gi|300790301|ref|YP_003770592.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|384153828|ref|YP_005536644.1| AMP-binding protein [Amycolatopsis mediterranei S699]
gi|399542181|ref|YP_006554843.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
gi|299799815|gb|ADJ50190.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|340531982|gb|AEK47187.1| AMP-binding domain protein [Amycolatopsis mediterranei S699]
gi|398322951|gb|AFO81898.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
Length = 552
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 177/390 (45%), Gaps = 47/390 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ + Y E D P H G + +A
Sbjct: 191 IQYTSGTTGFPKGATLSHHNILNNGFFVGELCNYTEHDKVCIPVPFYHCFGMVMGNLACT 250
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GAC V P F+ ++ LEAV TSL VP + +A L S++ +
Sbjct: 251 SHGACMVIPAPAFDPRATLEAVAAERCTSLYGVPTMF--IAELNHPDFGEFDLTSLRTGI 308
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK+ + A++ YGMTETS T T D ++E
Sbjct: 309 MAGSPCPVEVMKQVIDRMGMAEVSICYGMTETSPVST-QTRSDDSIER------------ 355
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPS 301
+ VG+ PH+E+KV + G + TRG VML YW+Q
Sbjct: 356 -------RVSTVGRVGPHLEVKVVDPETGLTVPRGEPGELCTRGYSVMLGYWEQPDKTAE 408
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ +D G V + GR + GGEN+YP E+E L HP I+ V+
Sbjct: 409 AIDAARWMHTGDLAVMDGDGYVNITGRIKDMVIRGGENLYPREIEEFLYTHPDILDAQVI 468
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E ++A VR+R+ L++E +R+ C K L +K PR
Sbjct: 469 GVPDEKYGEELMAWVRMRQGAS---------------PLTAEKVREFCSGK-LAHYKIPR 512
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+V FP+T TGK+R+ E+R + +S L
Sbjct: 513 -YVHVVDEFPMTVTGKVRKVEMREKSISLL 541
>gi|323488367|ref|ZP_08093614.1| 2-succinylbenzoate--CoA ligase [Planococcus donghaensis MPA1U2]
gi|323397874|gb|EGA90673.1| 2-succinylbenzoate--CoA ligase [Planococcus donghaensis MPA1U2]
Length = 474
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 185/407 (45%), Gaps = 49/407 (12%)
Query: 38 NKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAK 97
+ R +L +I ++ P WA + I +TSGTTG PKGV + +++
Sbjct: 114 DSRVVLFGEIENAKPVQFEP-QQQWAKNRTISIMYTSGTTGHPKGVRQTAENHFSSAVSS 172
Query: 98 IAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSL 157
+G +DV+L PL HI G S M L+ G KF++ + E + VT +
Sbjct: 173 ALNIGIAPEDVWLCAVPLFHISGFSILMRSLIYGMGVRLYEKFDADQSAEEICNGSVTHM 232
Query: 158 ITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 217
V + + T + + + + D K +L GGG +P MK A N ++ YGMT
Sbjct: 233 SVVGVTLERILTSVE-QASIRASDRFKAVLAGGGPIPIAYMKRAKNC--GIPVLQTYGMT 289
Query: 218 ETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH 277
ETSS T + + D + G+ GKP E+K G
Sbjct: 290 ETSSQTTTLQVADAE--------RKIGSA-------------GKPLFLYEVKTEKPG--E 326
Query: 278 VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGG 337
VG IL RG V Y +F + G WL TGDIG +DD G +++V RR+ I SGG
Sbjct: 327 VGEILIRGPQVTPGYIGKFAEREVQQDG--WLHTGDIGYLDDEGFLFVVDRRSDLIVSGG 384
Query: 338 ENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKE 397
ENVYP E+E VL HP + + V G + + E+ VA L++
Sbjct: 385 ENVYPAEIEKVLSAHPAVQEVGVCGAPSDQWGEVPVAFAVLQKE---------------- 428
Query: 398 LLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+++E L +CRE+ L +K P+ + + P ++ K+ R E+R
Sbjct: 429 --VTAEELLAYCREQ-LASYKVPKQLKV-VESLPRNASNKLLRRELR 471
>gi|394994435|ref|ZP_10387152.1| AMP-binding domain protein [Bacillus sp. 916]
gi|393804698|gb|EJD66100.1| AMP-binding domain protein [Bacillus sp. 916]
Length = 546
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 213/485 (43%), Gaps = 83/485 (17%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH 60
+++ D + Y+E+ + IP L+ +KR +L +SLP H
Sbjct: 110 LIIMDSYRQTSYVEMVNKLIPELK-----TCERGRLRSKRYPFLRTVLY-IGDKSLPGMH 163
Query: 61 SW----------------------APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKI 98
W + + + +TSGTTG PKGV++SH IV + A I
Sbjct: 164 RWDSLLDNAEAVTDAALDGRMDSLKKDDCIHMQYTSGTTGFPKGVMLSHFN-IVNNAANI 222
Query: 99 A-IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTS 156
A + D P H G + +A + GA + I +F + L+ VEQ T+
Sbjct: 223 AECMKLTSCDRLCIPVPFFHCFGCVLGVLACVSAGAAMIPIEQFSPPAVLKTVEQEACTA 282
Query: 157 LITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGM 216
L VP + +A L + + V+ + G P+E+M+E + AYG
Sbjct: 283 LHGVPTMF--IALLNDSRFSEYDLSHVRTGIMAGSPCPAEVMREVIGKMGMTDITIAYGQ 340
Query: 217 TETSSSLTFMTLYDP---TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD 273
TE S +T DP +ET G C PH+E+++
Sbjct: 341 TEASPVITQTRTDDPFERRVETAG--------------------CA---LPHIEVRIVRP 377
Query: 274 GSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVG 327
G+S G + TRG HVM Y+ A + WL TGD+ +D+ G + G
Sbjct: 378 GTSGEAARGEQGELCTRGYHVMKGYYKNQEATEEAIDKDGWLHTGDLAVMDEDGYCKITG 437
Query: 328 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 387
R + GGEN+YP E+E +L +HP + + VVG+ + + E A +RL++
Sbjct: 438 RLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDPKYGEEAAAWIRLKDG------ 491
Query: 388 NCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 447
Q++ S+E +R C+E ++ +K PR +VL+ +P+T++GKI++ ++R +
Sbjct: 492 ---QTA-------SAEDIRTFCKE-HIARYKVPR-YVLFTDEYPMTASGKIQKFKLREKT 539
Query: 448 MSHLK 452
+ LK
Sbjct: 540 IEELK 544
>gi|418532534|ref|ZP_13098437.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni ATCC
11996]
gi|371450393|gb|EHN63442.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni ATCC
11996]
Length = 518
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 186/388 (47%), Gaps = 45/388 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTGSPKGV++ H L +++ ++ + LH AP+ H+ + A+
Sbjct: 163 VFYTGGTTGSPKGVMLCHRNLYTNAISGLSSQIVRAGSIGLHAAPMFHLADGAFMNALFA 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G CHV +P+F+ + L+A+ VT + VP ++ L V K S++++ G
Sbjct: 223 AGGCHVMVPRFDPIAVLQAIASTGVTDTLLVPTMIQMLVDHPDVHK--YDLSSLRQMAYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL-ETPGQLP---QAFGN 245
+ L+ A + P + AYGMTE S T ++ P + PG+ ++ G
Sbjct: 281 ASPISEGLLDRAMRTIPDVGFVQAYGMTEVSPIATILS---PEMHREPGRARGRHRSAGR 337
Query: 246 VTPNS---VHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSV 302
T + + P+ G+ P E VG I+ RG VML YW++ A+
Sbjct: 338 ATACTEVRIVDPE----GREVPRGE----------VGEIVVRGPGVMLGYWNK-PAETEA 382
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ + W+ TGD G +DD G V++V R I +GGENVY EVE+V+ HP + V+G
Sbjct: 383 AIRDGWMHTGDGGRMDDEGYVFVVDRIKDMIVTGGENVYSIEVESVIATHPAVASCAVIG 442
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + E V + L+ QS + +EL+ C+E+ + G+K PR
Sbjct: 443 IPHEHWGEQVHVFIVLKPG---------QSLEAQELI-------HFCKER-IAGYKCPR- 484
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSH 450
V + + PL+ GKI + +R +H
Sbjct: 485 DVSFVEAMPLSGAGKILKTSLRAPFWAH 512
>gi|339321983|ref|YP_004680877.1| long-chain-fatty-acid--CoA ligase LcfB [Cupriavidus necator N-1]
gi|338168591|gb|AEI79645.1| long-chain-fatty-acid--CoA ligase LcfB [Cupriavidus necator N-1]
Length = 527
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 176/397 (44%), Gaps = 47/397 (11%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI----VQSLAKIAIVGYGEDDVYLHT 112
P H A ++ +TSGTTG PKG +++H L V + + DDV L
Sbjct: 157 PPAHQPAAHDVLLQLYTSGTTGRPKGAMLTHRNLTIGTEVSERENVRWSHWVADDVSLVA 216
Query: 113 APLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR 172
P+ HIGG + L+ GA V +F+ ++ L+ +E+ ++ L VPA M + R
Sbjct: 217 MPVAHIGGSGWGLRNLLSGAKGVVAREFDPRAVLDFIEKERISKLFLVPAAMQIVLRDPR 276
Query: 173 VKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT 232
++ R +K +L G +P+ L++E F + YGMTET+ ++ + D T
Sbjct: 277 ARQVDYSR--LKYLLYGAAPIPAALLREGIEVF-GCGFVQQYGMTETTGTIVALPPEDHT 333
Query: 233 LETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAH 287
E P+ GKP P VE+KV VG ++ R H
Sbjct: 334 TE-----------------EVPRMRAAGKPLPGVEIKVVDYEGRQLAPGEVGELVVRSQH 376
Query: 288 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 347
M YW Q E WL TGD G +D G +++ R I SGGENVYP EVE+
Sbjct: 377 NMAGYWKQPEETARTIDAEGWLRTGDAGYMDADGYLYIHDRVKDMIISGGENVYPAEVES 436
Query: 348 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 407
+ HP + + V+G+ + + E V A V L+ ++ ++ +
Sbjct: 437 AIYGHPQVADVAVIGVPDEKWGEAVKAIVVLKPGQAPDQAGIIAWTRQR----------- 485
Query: 408 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
L GFK P+ + + + P +GK+ R ++R
Sbjct: 486 ------LAGFKVPK-SIEFVEALPRNPSGKLLRRKLR 515
>gi|120405217|ref|YP_955046.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
gi|119958035|gb|ABM15040.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
Length = 502
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 190/405 (46%), Gaps = 43/405 (10%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 116
P P+ ++ FTSGTT PK V +SH+ L + + DD L P
Sbjct: 130 PAAEFADPDAVGVVLFTSGTTSKPKAVELSHANLTSYIMGTVEFASAEPDDAALICVPPY 189
Query: 117 HIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
HI G+S+A++ L G V++ +F++ ++ V VTS VP ++ + +++ + T
Sbjct: 190 HIAGVSAALSNLYAGRKMVYLTQFDAGRWVDLVTGEGVTSATVVPTMLDRIVSVLETRGT 249
Query: 177 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
+++ + GG +P L+++A + P ++AYG+TETSS++ +T D
Sbjct: 250 TL--PTLRTLAYGGSKVPLPLVRKALSLLPAVGFVNAYGLTETSSTIAVLTPDDHRAALA 307
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLR 291
A + VG+P P +E+++ +D G+ G + RG V +
Sbjct: 308 ASDEAAIRRLG----------SVGQPVPGIEVEIRADDGTVLGAGETGELFVRGEQVSGK 357
Query: 292 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
Y D SV + W T D+ +D+ G +++ GR + I GGEN+ P E+E VL++
Sbjct: 358 YTDIG----SVLDEQGWFPTKDVAFLDEEGYLFIGGRSDDTIIRGGENIAPAEIEDVLVE 413
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
HP + VVG + +++VA V Q ++ E LR H R
Sbjct: 414 HPHVRDCAVVGADDPEWGQIIVAVV------------VAQPGTEPDV----EDLRSHVRS 457
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPS 456
+ L G + P V++R P +TGK+ +RRE++ L PS
Sbjct: 458 Q-LRGSRTPDR-VVFRDELPTNATGKV----LRRELVDELNQDPS 496
>gi|387900866|ref|YP_006331205.1| long-chain-fatty-acid--CoA ligase [Burkholderia sp. KJ006]
gi|387575758|gb|AFJ84474.1| Long-chain-fatty-acid--CoA ligase [Burkholderia sp. KJ006]
Length = 575
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 130/453 (28%), Positives = 207/453 (45%), Gaps = 61/453 (13%)
Query: 14 ELQHTAIPSLRWHVSLGS-SSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVII 70
+L +PSLR VS+G + + D++ D L L ++ T A A+ I
Sbjct: 163 DLHAARVPSLRTVVSMGDVAPAGMFRFADVMARGRDTLDAARLDAIGAT--LAAGEAINI 220
Query: 71 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLM 129
FTSGTTGSPKG ++H ++ + + + + E D PL H G+ A +A +
Sbjct: 221 QFTSGTTGSPKGATLTHRNVVNNARSIAMAMRFTEQDALCIPVPLYHCFGMVLAVLACVS 280
Query: 130 VGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
GA VF + F+ + L AV T+L VP + +A L + +++ +
Sbjct: 281 TGAAMVFPGEAFDPVATLAAVADERCTALHGVPTMF--IAELDHPEFKTFDLSTLRTGIM 338
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G P E MK + +++ AYGMTETS P +F + T
Sbjct: 339 AGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSFQSSTD 379
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
+ + + + VG+ PH+E+K+ G V G + T+G VML YWD
Sbjct: 380 DPLEK-RTTTVGRIQPHLEVKIVDPGGDIVPVGATGELCTKGYSVMLGYWDD-----DAK 433
Query: 304 TGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
T EV W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I
Sbjct: 434 TREVLIDGWMHTGDLATLDGQGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQ 493
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V G+ +A+ E + A + LR Q +E + +R C + + +K
Sbjct: 494 VFGLPDAKYGEELCAWIVLRAGEQMTEDD----------------VRAFC-QGQIAHYKI 536
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 537 PR-YIRFVDELPMTVTGKVQKFVMRERMIEELK 568
>gi|54026121|ref|YP_120363.1| AMP-binding protein [Nocardia farcinica IFM 10152]
gi|54017629|dbj|BAD58999.1| putative acyl-CoA synthetase [Nocardia farcinica IFM 10152]
Length = 555
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 175/396 (44%), Gaps = 49/396 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + GY E D P H G+ +A
Sbjct: 195 IQYTSGTTGFPKGATLSHHNILNNGFFVGELCGYTEQDRICVPVPFYHCFGMVMGNLAAT 254
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVP----AIMADLATLIRVKKTWKGRDSV 183
GA V P F+ + L AV TSL VP A++A+L T + ++
Sbjct: 255 SHGAAIVIPAPSFDPAATLAAVAAEKCTSLYGVPTMFIAVLAELDTELEKSGAAPDLSTL 314
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + G P E+MK + +++ YGMTETS T
Sbjct: 315 RTGIMAGSPCPVEVMKRVIDRLGMSEVCICYGMTETSPVST------------------- 355
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 297
+ + VG+ PH+E+K+ + G + TRG VML YWD+
Sbjct: 356 -QTRRDDDIDRRTATVGRVGPHLEVKIVDPATGRTVPRGEPGELCTRGYSVMLGYWDEPE 414
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
W+ TGDIG +D+ G V + GR + GGEN+YP E+E L HP I+
Sbjct: 415 KTAEAIDAARWMHTGDIGVMDEDGYVAVTGRIKDMVIRGGENIYPREIEEFLYTHPDILD 474
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
V+G+ + R E ++A +R+RE + L + +R+ C K L F
Sbjct: 475 AQVIGVPDERYGEELMAWIRMREGAE---------------PLDAAAVREFCTGK-LAHF 518
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
K PR +V + FP+T TGK+R+ E+R L+S
Sbjct: 519 KIPR-YVHVVEEFPMTVTGKVRKAEMRELAREMLQS 553
>gi|367468134|ref|ZP_09468029.1| Long-chain-fatty-acid--CoA ligase [Patulibacter sp. I11]
gi|365816794|gb|EHN11797.1| Long-chain-fatty-acid--CoA ligase [Patulibacter sp. I11]
Length = 530
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 171/382 (44%), Gaps = 44/382 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG KGV++SH+ L+V +L + +G YLH P+ H+ + L+
Sbjct: 174 LFYTGGTTGRSKGVMLSHTNLLVDALHGLPTLGITRSSRYLHVGPMFHLANGAGMFGALV 233
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKIL 187
GA HV + +F + A+E+H VT + VP ++ L V + D S++ +L
Sbjct: 234 AGAGHVIVDRFTPEGTAVAIERHGVTHALLVPTMIG----LFVVDPAAREHDLSSLQGLL 289
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
GG + ++ A P L+ AYG +E LT ++ E P G
Sbjct: 290 YGGSPMTESVIAAAQELLPGTGLVQAYGQSEAGPILTMLSAERHVFEGPLAGKTRSG--- 346
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSV 302
G+P V++ + D + VG I RG +VM YW+ + +
Sbjct: 347 ------------GEPVIGVDVAILDDDGNELPRGDVGEICGRGDNVMAGYWN-LPDQTAK 393
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ WL TGD G +DD G V++V R I +GGENVY EVE + HP ++ V+G
Sbjct: 394 ALRHGWLYTGDAGYMDDDGFVFVVDRLKDMIVTGGENVYTAEVENAIAAHPEVVECAVIG 453
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + + E V A V +RE L E L HC++ + +K PR
Sbjct: 454 IPSEKWGEQVHAVVAVREGSA----------------LDGEALIAHCKQL-IANYKCPRS 496
Query: 423 FVLWRKPFPLTSTGKIRRDEVR 444
+ P + GKI + +R
Sbjct: 497 VEIRTGELPRSGAGKILKTTLR 518
>gi|350530832|ref|ZP_08909773.1| long-chain-fatty-acid--CoA ligase [Vibrio rotiferianus DAT722]
Length = 521
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 190/383 (49%), Gaps = 50/383 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG +SH+ ++ +++ ++ D + T PL H G + M A
Sbjct: 168 VILYTSGTTGQPKGAELSHTNMLTNAMSSQYLMRLEYSDTTMATLPLFHSFGQTVMMNAS 227
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
++ G+ V IP+FE K +E + QH V+ VP + +A L +++ + + VK L
Sbjct: 228 VLTGSTMVLIPRFEPKFVIEQIIQHKVSVFAGVPTMY--IALLRAGEQSPEHSELVKHSL 285
Query: 188 ----NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+GG +P E++++ F + ++ YG++ET+ TF +
Sbjct: 286 RLGVSGGASMPVEVIRQFEQRF-ELPVLEGYGLSETAPVATFNHID-------------- 330
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 303
G+ P SV QP V K A ++K +G + + VM Y+ +P +
Sbjct: 331 GDRLPGSVGQPLCGYVIKIA---DVKGHGQAIGELGEVCIKSPSVMKGYY----GRPEAT 383
Query: 304 TGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+ W TGDIG +D+ GN+++V R I GG NVYP E+E VL+ HP + + V
Sbjct: 384 RDALRDGWFLTGDIGRVDEHGNLFIVDRVKDMIIRGGYNVYPREIEEVLMCHPDVEMVAV 443
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VG + RL E V A V L + +++C S+VL CRE+ L +K P
Sbjct: 444 VGEHDDRLGEEVHAHVVLHQ-----DAHC-----------KSDVLIAWCREQ-LADYKYP 486
Query: 421 RLFVLWRKPFPLTSTGKIRRDEV 443
R V RK P+T+TGKI + E+
Sbjct: 487 RR-VFIRKALPMTATGKILKREL 508
>gi|329940648|ref|ZP_08289929.1| AMP-binding domain protein [Streptomyces griseoaurantiacus M045]
gi|329300709|gb|EGG44606.1| AMP-binding domain protein [Streptomyces griseoaurantiacus M045]
Length = 548
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 190/435 (43%), Gaps = 59/435 (13%)
Query: 21 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 80
P LR V +G S D LTA + R + + + I +TSGTTG P
Sbjct: 151 PDLRETVYIGDPSWD------ALTAGAVSVPQDRPAAIGAGLSCDDPINIQYTSGTTGFP 204
Query: 81 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IP 138
KG +SH ++ +GY E D P H G+ + GAC V P
Sbjct: 205 KGATLSHHNILNNGFWVGRTIGYTEQDRVCLPVPFYHCFGMVMGNLGATSHGACIVIPAP 264
Query: 139 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 198
FE + L AV+ TSL VP + +A L S++ + G P E+M
Sbjct: 265 SFEPAATLRAVQSERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGIMAGSPCPVEVM 322
Query: 199 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 258
K A++ YGMTETS ++ T D LE H+
Sbjct: 323 KRVVTEMHMAEVSICYGMTETSP-VSLQTRRDDDLE-----------------HRTG--T 362
Query: 259 VGKPAPHVELKVCSD--------GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 310
VG+ PH+E+KV G+S G + TRG VML YW++ V W+
Sbjct: 363 VGRVLPHIEVKVVDPVTGVTQPRGTS--GELCTRGYSVMLGYWEEPAKTAEVVDAGRWMH 420
Query: 311 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 370
TGD+ + + G V +VGR I GGENVYP E+E L HP I + VVG+ + R E
Sbjct: 421 TGDLAVMREDGYVEIVGRIKDMIIRGGENVYPREIEEFLYAHPKIADVQVVGVPHERYGE 480
Query: 371 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRKP 429
V+ACV RE+ D + + +R C E L +K P RL VL
Sbjct: 481 EVLACVIPREAG-------DPPTLQE--------VRAFC-EGRLAHYKVPTRLSVL--DS 522
Query: 430 FPLTSTGKIRRDEVR 444
FP+T +GK+R+ E+R
Sbjct: 523 FPMTVSGKVRKVELR 537
>gi|381190931|ref|ZP_09898445.1| long-chain-fatty-acid-CoA ligase [Thermus sp. RL]
gi|380451277|gb|EIA38887.1| long-chain-fatty-acid-CoA ligase [Thermus sp. RL]
Length = 560
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 185/400 (46%), Gaps = 58/400 (14%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA-------IVGYGEDDVYLHT 112
H+ PE ++ +T GTTG KG +++H L+ L A +VG G V L
Sbjct: 200 HASDPEDLALLQYTGGTTGLSKGAMLTHKNLVANVLQIDAWDPTSKDLVGKG---VMLGA 256
Query: 113 APLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLI 171
P H+ G++ AM L G V +P+ E +EA+E+H VT VP +
Sbjct: 257 LPFFHVYGMTVAMNYGLFSGYKIVLLPRPEIXXIVEAIEKHXVTHFPGVPTLYVAFNNFP 316
Query: 172 RVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 231
++K + S++ L+G LP E+ K A+LI YG++E S +T +P
Sbjct: 317 GIEK--RNVKSIRICLSGAAPLPVEVAKR-FEELTGARLIEGYGLSEASP----VTHSNP 369
Query: 232 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGA 286
L G + S+ G P P VE KV + V G ++ +G
Sbjct: 370 VL----------GLIKKGSI--------GMPFPSVEAKVVDEEGKEVPMGEVGELIVKGP 411
Query: 287 HVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 346
+VM YW++ + + + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE
Sbjct: 412 NVMKGYWNR-PEETEKALKDGWLYTGDMAKMDEDGYFYIVDRKKDMIIAGGYNIYPREVE 470
Query: 347 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 406
VL QH + VVG+ + E V A + L+ ++ + D +
Sbjct: 471 EVLYQHEAVQEAAVVGVPDPYRGETVAAFLVLKXEYRGKVTEKD--------------IE 516
Query: 407 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
CR+ NL +K PR+ + +R+ P +S GKI R E+R E
Sbjct: 517 AFCRQ-NLAAYKVPRI-IQFRESLPKSSVGKILRRELREE 554
>gi|386399261|ref|ZP_10084039.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM1253]
gi|385739887|gb|EIG60083.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM1253]
Length = 564
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 183/394 (46%), Gaps = 47/394 (11%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
+ AV + FTSGTTGSPKGV ++H ++ + E D PL H G+
Sbjct: 203 DDAVNVQFTSGTTGSPKGVTLTHHNILNNGYFVGRAMRLTEADRICIPVPLYHCFGMVMG 262
Query: 125 -MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+A + +GA V+ + F+ + L +EQ T+L VP + +A L + + S
Sbjct: 263 NLASVTLGATMVYPGEGFDPLATLRTIEQEKCTALYGVPTMF--IAELDHSEFSNFNLTS 320
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + G P E+MK + ++ AYGMTETS ++F + D L+
Sbjct: 321 LRTGIMAGAPCPIEVMKRVNSEMNMGEVTIAYGMTETSP-VSFQSAVDDPLDR------- 372
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFL 297
+ VG+ PHVE+KV DG G + TRG VML YW++
Sbjct: 373 ------------RVSTVGRIHPHVEVKVVDLDGKIVKRGERGELCTRGYSVMLGYWEEPE 420
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
V W+ TGDI IDD G +VGR + GGEN+YP E+E L +HP I
Sbjct: 421 KTADVLDANGWMHTGDIAIIDDQGYCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQD 480
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ + G+A+ R E + A +R+R L+ E +R C + +
Sbjct: 481 VQIFGVADTRYGEELCAWIRVRSGET----------------LTMEEVRAFC-DGQIAHN 523
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
K PR +V + FP+T TGKI++ +R EV L
Sbjct: 524 KIPR-YVEFVDEFPMTVTGKIQKFLMRDEVEQRL 556
>gi|118466293|ref|YP_884071.1| AMP-dependent synthetase and ligase [Mycobacterium avium 104]
gi|254777389|ref|ZP_05218905.1| AMP-dependent synthetase and ligase [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118167580|gb|ABK68477.1| AMP-dependent synthetase and ligase [Mycobacterium avium 104]
Length = 509
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 182/400 (45%), Gaps = 45/400 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ I+ FTSGTT PK V +SH+ L + E D L P HI G+S+
Sbjct: 139 PDSVAIVLFTSGTTSQPKAVELSHNNLTSYITGTVEFGAADETDAALICVPPYHIAGVSA 198
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 181
A++ L G V++P F+++ + + VT+ VP ++ + T++ G
Sbjct: 199 ALSNLYAGRKMVYLPNFDAREWVRLINAENVTTATVVPTMLDRIVTVLENGDPDTGAPIE 258
Query: 182 --SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
S++ + GG + L++ A P ++AYG+TETSS++ +T P
Sbjct: 259 LPSLRNLAYGGSKVGLPLVRRALELLPHVGFVNAYGLTETSSTIAVLT--------PDDH 310
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWD 294
A TP + + VG+ +EL++ + + G + RG V RY
Sbjct: 311 RAALAATTPEAARRLG--SVGQAVAGIELQIRDEAGNVLPPGETGELFVRGEQVSGRYT- 367
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
SV + W T DI +DD G +++ GR + I GGEN+ P E+E VL++HP
Sbjct: 368 ---GIGSVLDEDGWFPTRDIAMLDDEGYLFIGGRSDDTIIRGGENIAPAELEEVLVEHPH 424
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ + VVG+ E QW ++ + E LR+ R K+L
Sbjct: 425 VRDVAVVGV----------------EDPQWGQAIVAVVVPAAGVEPDPEELREFVR-KSL 467
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
G + P V++R P T+TGK+ +RRE+++ L L
Sbjct: 468 RGSRTPD-EVVFRDELPTTATGKV----LRREIIATLAGL 502
>gi|426408980|ref|YP_007029079.1| AMP-dependent synthetase and ligase [Pseudomonas sp. UW4]
gi|426267197|gb|AFY19274.1| AMP-dependent synthetase and ligase [Pseudomonas sp. UW4]
Length = 518
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 183/383 (47%), Gaps = 47/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV+ SH L ++A+ A V D + LH AP+ H+ LS + + +
Sbjct: 163 IMYTGGTTGRPKGVMQSHMNLWTAAVARAADVPVPADALTLHIAPMFHLAALSRVILISL 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
+G +F+P F++ + +E+ +T ++ VP ++ A ++ + ++ + G
Sbjct: 223 LGLPSIFVPAFDALDVMRTIERERITDILIVPTMLQ--ALIMHPEFARHDLSCLRSLTYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ L++ A + P + YGMTE + P + G P+ N +
Sbjct: 281 ASPIAVPLLELALKALPNVEFTQGYGMTEAA----------PPISANG--PE---NHSAE 325
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVST 304
+ + G+P V +++ + + VG +L RG ++ML YW+ KP +
Sbjct: 326 GIANGRLRSAGRPGLGVTVRIVDEHDNEVPRGTVGEVLVRGPNIMLGYWN----KPEETA 381
Query: 305 GEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ W+ TGD +DD G +++V R I SGGENVY EVE+ + HP + V+
Sbjct: 382 QALRGGWMHTGDGAYMDDDGFIYIVDRFKDMIVSGGENVYSGEVESAISSHPAVAACAVI 441
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI A+ E V A + L+ D + ++ +HCR + + G+K P+
Sbjct: 442 GIPCAQWGEAVHAVIVLKP---------DHEAAGAAII-------EHCR-RQIAGYKTPK 484
Query: 422 LFVLWRKPFPLTSTGKIRRDEVR 444
V +R PL+ GK+ + ++R
Sbjct: 485 -SVEFRTALPLSGAGKVLKRDLR 506
>gi|359768354|ref|ZP_09272129.1| putative acyl-CoA synthetase [Gordonia polyisoprenivorans NBRC
16320]
gi|359314229|dbj|GAB24962.1| putative acyl-CoA synthetase [Gordonia polyisoprenivorans NBRC
16320]
Length = 517
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 185/392 (47%), Gaps = 52/392 (13%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
A + +I +TSGTTG PKG +++H L ++ + + D+ APL HIGGL+
Sbjct: 162 ASDAIAVIMYTSGTTGRPKGAMLTHGNLFWNNMNSLLCLDVETSDISYCAAPLFHIGGLN 221
Query: 123 -SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+ + L G V P F+ +AL+ +E++ VT++ VPA+ ++ + R +
Sbjct: 222 VTTLVTLQKGGHIVLAPTFDPAAALDTIEKYRVTTMFGVPAMFLFMSQVPRFETA--DLS 279
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ ++ GG +P LM+ YG+TET+ M L E+ ++
Sbjct: 280 SLRYLICGGAPVPEPLMRRYAER--GLAFAQGYGLTETAPLALVMGLD----ESAAKIGA 333
Query: 242 AFGNVTP-------NSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWD 294
A V P ++ + P V VG P G + RG VM+ YW
Sbjct: 334 AGNKVLPLSDVRLVDATNSP--VPVGTP----------------GEVCVRGPQVMVGYWR 375
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
A +V E W TGDIG DD G +++V R + +GGENVYP EVE+VL HP
Sbjct: 376 NQAATDAVIDDEGWFHTGDIGREDDDGYIYVVDRVKDMVITGGENVYPAEVESVLYSHPA 435
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ I ++G+ +A+ E V A + ++ +E+ L E LR +++ L
Sbjct: 436 VAEIAILGLPDAKWGEAVTAVI--------------ATAPGQEVTL--EELRDFAKDQ-L 478
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
+K P L + + P +GK+ + ++R +
Sbjct: 479 ARYKLP-LRLEFVDALPRNPSGKVLKYQLREQ 509
>gi|331696488|ref|YP_004332727.1| o-succinylbenzoate--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
gi|326951177|gb|AEA24874.1| o-succinylbenzoate--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
Length = 505
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 203/452 (44%), Gaps = 56/452 (12%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH 60
+LVT+E EL A+P++R V LG+ + + + L AD G +P
Sbjct: 102 VLVTEEEFRGRIDELA-PALPTIRHRVLLGAGAPEGWIAYEALVAD---GAGAPPVPPGI 157
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
+ +TSGTT PKGV I+H + ++L I +G DD L PL H GG
Sbjct: 158 VDDEHTLARLMYTSGTTSRPKGVRITHGNVAWKNLGLIVELGLSADDTVLVCGPLYHCGG 217
Query: 121 LS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
L +A +GA V + F++ L+A+E+ V + PA+M A L +
Sbjct: 218 LDLPGLAAFHMGARLVLMRSFDAAGVLDAIEREKVGIVWLAPAMMN--AVLQVPDLADRD 275
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
SV+ I+ GG +P +++ +FP AYG+TET S
Sbjct: 276 TTSVRCIIGGGEKMPEPVVRRILEAFPNTWFADAYGLTETVS------------------ 317
Query: 240 PQAFGNVTPNSVHQPQGV-CVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW 293
G+ + H + VG+P PHVE+++ + + V G I RG V YW
Sbjct: 318 ----GDTVLDREHSLSKIGSVGRPIPHVEVRIVDEQGAEVPAGELGEIALRGPKVFDGYW 373
Query: 294 -DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
D+ ++ G W TGDIG +D G +++ R I SGGEN+ EVE VL +H
Sbjct: 374 RDEEATARAIRDG--WFHTGDIGRLDADGFLYVEDRLKDMIISGGENIATPEVERVLYEH 431
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P ++ VV + + R E+ A V L+ + +E +R CR++
Sbjct: 432 PAVLEAAVVAMPHERWGEVPRAVVVLKPGER----------------ADAEDIRAFCRDR 475
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
L FK P + V + P T +GK+ + E+R
Sbjct: 476 -LAKFKVP-VAVDFLDALPRTPSGKVLKRELR 505
>gi|239831428|ref|ZP_04679757.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium LMG
3301]
gi|239823695|gb|EEQ95263.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium LMG
3301]
Length = 571
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 205/443 (46%), Gaps = 53/443 (11%)
Query: 20 IPSLRWHVSLGSSSS-DFVNKRDML-TADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 77
+PSLR + LG+ + +N D+ + D + L L + + + I FTSGTT
Sbjct: 165 LPSLRCVIRLGTEQTPGMLNFDDVAQSGDEVTRQELAQLADELQF--DDPINIQFTSGTT 222
Query: 78 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVF 136
GSPKG +SH ++ + E D P H G+ +A + G+C V
Sbjct: 223 GSPKGATLSHHNILNNGFFVGEAMQLSEQDRLCIPVPFYHCFGMVLGNLACVTHGSCMV- 281
Query: 137 IPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 194
IP F+ L+ VE+ T L VP + +A L + S++ + G P
Sbjct: 282 IPNDSFDPFLTLQTVEEEQCTGLHGVPTMF--IAMLDHPDFSRFDLSSLRTGIMAGSPCP 339
Query: 195 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 254
E+M+ + + ++ AYGMTETS P +F + T + + +
Sbjct: 340 IEVMRRVVSEMHQGEITIAYGMTETS-------------------PVSFQSSTSDPLER- 379
Query: 255 QGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 309
+ VG+ PH+E+K+ +DG G +LTRG VM YW+ + W+
Sbjct: 380 RVSTVGRIHPHLEVKIVDADGKVVPRGEKGELLTRGYSVMRGYWNDAESSAGAIDDAGWM 439
Query: 310 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 369
TGD+ +ID+ G +VGR I GGEN+YP E+E L HP I + + GI + +
Sbjct: 440 HTGDLATIDEEGYCNIVGRIKDLIIRGGENIYPREIEEFLFAHPAISDVQIFGIPDRKFG 499
Query: 370 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 429
E++ A V+L + Q SE E L ++CR++ + +K P + +
Sbjct: 500 EIICAWVKLHKDAQLSE----------------EDLSEYCRQR-IAHYKVP-AHIRFVDQ 541
Query: 430 FPLTSTGKIRRDEVRREVMSHLK 452
FP+T TGKI++ +R+ ++ L+
Sbjct: 542 FPMTVTGKIQKFVMRQAMIEELE 564
>gi|327399671|ref|YP_004340540.1| long-chain-fatty-acid--CoA ligase [Hippea maritima DSM 10411]
gi|327182300|gb|AEA34481.1| Long-chain-fatty-acid--CoA ligase [Hippea maritima DSM 10411]
Length = 564
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 180/389 (46%), Gaps = 48/389 (12%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
+ A+ I +TSGTTG PK +SH +I + + + D P H G+ +
Sbjct: 199 DDAINIQYTSGTTGFPKAATLSHFNIINNGFFVGQAMKFTDKDRLCVPVPFYHCFGMVMS 258
Query: 125 MAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+ +P F +++ LEAVE+ T+L VP + +A L + S
Sbjct: 259 NLTCTTHGATIVLPSEYFNAEATLEAVEKEKCTALHGVPTMF--IAELEHPRFKEFDLTS 316
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + G P E+MK ++ AYG TE S +T TL D TLE
Sbjct: 317 LRTGIMAGSPCPVEVMKRVNKEMHMEQVEIAYGQTEASPVIT-QTLADDTLE-------- 367
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQF 296
H+ + VG+P P++E+K+ + + + G + RG +VM Y++
Sbjct: 368 ---------HRTE--TVGRPLPYIEVKIVNPETGEILPVGEQGELCARGYNVMKYYYNNP 416
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
A + WL TGD+ ++D+ G + GR I GG+N+YP E+E L HP +
Sbjct: 417 QATKEAIDEDGWLHTGDLATMDEDGYFKITGRIKDMIIRGGQNIYPREIEEFLYTHPKVA 476
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ V+G+ + + E V A VRL+E +E E ++++C+ K +
Sbjct: 477 DVQVIGVPDKKYGEEVCAWVRLKEGETATE----------------EEIKEYCQGK-IAH 519
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
+K PR ++ + FP+T TGKIR+ E+R
Sbjct: 520 YKIPR-YIKFTDSFPMTVTGKIRKVEMRE 547
>gi|312198562|ref|YP_004018623.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
gi|311229898|gb|ADP82753.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
Length = 542
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 177/389 (45%), Gaps = 46/389 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AML 128
I FTSGTTG PKG +++H + ++G G D YL P H GL + + A L
Sbjct: 192 IIFTSGTTGKPKGAMLAHGPSTRLYTSWADVIGLGHGDRYLLVYPFFHTAGLKAGLLASL 251
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+VGA V P F+ + + VE +T L PA+ T++ T S + +
Sbjct: 252 LVGATLVPYPVFDVPAVMRLVETEKITMLPGPPAVYQ---TILNSDLTGYDLSSWRLAVT 308
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G +P EL++ +++ YG+TET+ ++ D P
Sbjct: 309 GSAAVPVELVRRLRADLGLRTVVTGYGLTETTGTVAMCRHTD----------------DP 352
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
V + G + +E++V D + V G I+ RG ++M Y D A
Sbjct: 353 ELVSRTSGRALDG----IEVRVVDDAGTEVPRGEPGEIIVRGFNIMTGYLDNPAATAETI 408
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ WL TGDIG +DDGGN+ + R+ GG N YP E+E++L +HP I + VVG+
Sbjct: 409 DADGWLKTGDIGVMDDGGNIAITDRKKDMFIVGGFNAYPAEIESMLAEHPAIAQVAVVGV 468
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ RL E+ +A V R + +E++ R++ + +KAPR +
Sbjct: 469 PDERLGEVGMAYVIPR--------------TGQPRPTPAEII-AWSRDR-MANYKAPR-Y 511
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
V PL +TGK+ R E+R + L+
Sbjct: 512 VEVVDALPLNATGKVVRYELRDRAAATLR 540
>gi|402899613|ref|XP_003912785.1| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member
2, mitochondrial [Papio anubis]
Length = 642
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 188/403 (46%), Gaps = 70/403 (17%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-----------APLCH- 117
I FTSGTTGSPKG +SH ++ S +I+G + + LH +PL H
Sbjct: 287 IQFTSGTTGSPKGATLSHYNIVNNS----SILG---ERLKLHEKTPEQLRMILPSPLYHC 339
Query: 118 IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
+G + M LM GA + P F K ALEA+ + + L P + D+ +
Sbjct: 340 LGSVGGTMMCLMYGATLILASPVFNGKKALEAISRERGSFLYGTPTMFVDILN----QPD 395
Query: 177 WKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 234
+ D +++ + G P EL++ N L+ AYG TE S
Sbjct: 396 FSSYDISTMRGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------- 441
Query: 235 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHV 288
P F N ++V Q + VG+ PH E ++ + + + G + RG V
Sbjct: 442 -----PVTFANFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGMLAELNTPGELCIRGYCV 495
Query: 289 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 348
ML YW + + W TGDI ++++ G +VGR I GGEN+YP E+E
Sbjct: 496 MLGYWGEPQKTEEAVDQDKWYRTGDIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDF 555
Query: 349 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 408
HP + + VVG+ + R+ E + AC+RL++ + ++E ++
Sbjct: 556 FHTHPKVQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTAEEMKAF 599
Query: 409 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
C+ K ++ FK PR ++++ +PLT++GKI++ ++R ++ HL
Sbjct: 600 CKGK-ISHFKIPR-YIVFVTNYPLTTSGKIQKFKLREQMERHL 640
>gi|398938415|ref|ZP_10667818.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM41(2012)]
gi|398165963|gb|EJM54073.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM41(2012)]
Length = 564
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 198/450 (44%), Gaps = 49/450 (10%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICF 72
+LQ +P LR +SL + LT D+ S L HS + AV I +
Sbjct: 156 KLQSERLPELRGVISLDAQPPSGFLPWSQLT-DLAGNVSAEQLSERQHSLHFDQAVNIQY 214
Query: 73 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGA 132
TSGTTG PKG +SH ++ +G D + PL H G+ M
Sbjct: 215 TSGTTGFPKGATLSHYNILNNGYMVGESLGLTASDRLVIPVPLYHCFGMVMGNLGCMTHG 274
Query: 133 CHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
+ P F+ L AV + T+L VP + +A L + K+ S++ + G
Sbjct: 275 STMIYPNDAFDPLLTLTAVAEEKATALYGVPTMF--IAMLDQPKRAEFDLSSLRTGIMAG 332
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P E+M+ + +++ AYGMTETS +L+T P+
Sbjct: 333 ATCPIEVMRRVISEMHMSEVQIAYGMTETSPV---------SLQT-----------GPSD 372
Query: 251 VHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTG 305
+ + VG+ P +E K+ + + V G + TRG VML YW+
Sbjct: 373 ELELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQ 432
Query: 306 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 365
W+ TGD+ S++D G V + GR I GGEN+YP E+E HP + + V+GI
Sbjct: 433 AGWMHTGDLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPC 492
Query: 366 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 425
+R E +VA W + + S+ +E L+ C+E+ + FK PR F
Sbjct: 493 SRYGEEIVA---------WIKFHPGHSATEQE-------LQTWCKER-IAHFKTPRYFKF 535
Query: 426 WRKPFPLTSTGKIRRDEVRREVMSHLKSLP 455
+ FP+T TGKI++ +R + LK++P
Sbjct: 536 VDE-FPMTVTGKIQKFRMREISIEELKAIP 564
>gi|387813582|ref|YP_005429064.1| long-chain-fatty-acid-CoA ligase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381338594|emb|CCG94641.1| long-chain-fatty-acid-CoA ligase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 562
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 178/384 (46%), Gaps = 47/384 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I FTSGTTG+PKG ++H ++ E+D + PL H G+ +
Sbjct: 208 IQFTSGTTGNPKGATLTHHNILNNGYFVGESQRLTENDRLVIPVPLYHCFGMVMGNLGCI 267
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ P F+ K+ L+AV Q T+L VP + +A L + +++ +
Sbjct: 268 THGTAMIYPSEGFDPKTVLQAVHQEKATALYGVPTMF--IAELADPEFDSYDLSTLRTGI 325
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P+E+MK+ ++ AYGMTETS T + DP
Sbjct: 326 MAGSICPAEVMKKVNGKMHMKEVQIAYGMTETSPVSTQTSSLDP---------------- 369
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ Q VG+ PH+E K+ G+ +V G + TRG VML+YW+
Sbjct: 370 ----FEKQVTTVGRTQPHLETKIVDPGTGNVMPRGEIGELCTRGYSVMLKYWNNEEKTRE 425
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ ++D+ G + +VGR + GGEN+YP+E+E L HP I + V
Sbjct: 426 AIDDAGWMHTGDLATMDEDGYIQIVGRIKDMVIRGGENIYPKEIEEFLYTHPAIEEVQVT 485
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI + + E ++A V+LR + D +++E L+ C+ K + FK P+
Sbjct: 486 GIPDEKYGEELIAWVKLR-------PDADP--------VTAEDLQAFCKGK-IAHFKIPK 529
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRR 445
+ + FP+T TGKI++ ++R
Sbjct: 530 NY-KFVDAFPMTVTGKIQKFKMRE 552
>gi|41409757|ref|NP_962593.1| hypothetical protein MAP3659 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|417748400|ref|ZP_12396840.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
avium subsp. paratuberculosis S397]
gi|41398589|gb|AAS06209.1| hypothetical protein MAP_3659 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|336460035|gb|EGO38944.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
avium subsp. paratuberculosis S397]
Length = 509
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 182/400 (45%), Gaps = 45/400 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ I+ FTSGTT PK V +SH+ L + E D L P HI G+S+
Sbjct: 139 PDSVAIVLFTSGTTSQPKAVELSHNNLTSYITGTVEFGAADETDAALICVPPYHIAGVSA 198
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR--- 180
A++ L G V++P F+++ + + VT+ VP ++ + T++ G
Sbjct: 199 ALSNLYAGRKMVYLPNFDAREWVRLINAENVTTATVVPTMLDRIVTVLENGDPDTGAPIE 258
Query: 181 -DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
S++ + GG + L++ A P ++AYG+TETSS++ + TP
Sbjct: 259 LPSLRNLAYGGSKVGLPLVRRALELLPHVGFVNAYGLTETSSTIAVL--------TPDDH 310
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWD 294
A TP + + VG+ +EL++ + + G + RG V RY
Sbjct: 311 RAALAATTPEAARRLG--SVGQAVAGIELQIRDEAGNVLPPGETGELFVRGEQVSGRYT- 367
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
SV + W T DI +DD G +++ GR + I GGEN+ P E+E VL++HP
Sbjct: 368 ---GIGSVLDEDGWFPTRDIAMLDDEGYLFIGGRSDDTIIRGGENIAPAELEEVLVEHPH 424
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ + VVG+ E QW ++ + E LR+ R K+L
Sbjct: 425 VRDVAVVGV----------------EDPQWGQAIVAVVVPAAGVDPDPEELREFVR-KSL 467
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
G + P V++R P T+TGK+ +RRE+++ L L
Sbjct: 468 RGSRTPD-EVVFRDELPTTATGKV----LRREIIATLAGL 502
>gi|55981432|ref|YP_144729.1| long-chain fatty acid--CoA ligase [Thermus thermophilus HB8]
gi|55772845|dbj|BAD71286.1| long-chain-fatty-acid--CoA ligase [Thermus thermophilus HB8]
Length = 560
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 185/400 (46%), Gaps = 58/400 (14%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA-------IVGYGEDDVYLHT 112
H PE ++ +T GTTG KG +++H L+ L A +VG G V L
Sbjct: 200 HVPDPEDLALLQYTGGTTGLSKGAMLTHRNLVANVLQIDAWDPTSKDLVGKG---VMLGA 256
Query: 113 APLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLI 171
P H+ G++ AM L G V +P+ E K+ +EA+E+H VT VP +
Sbjct: 257 LPFFHVYGMTVAMNYGLFSGYKIVLLPRPEIKAIVEAIEKHQVTHFPGVPTLYVAFNNFP 316
Query: 172 RVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 231
+++ + SV+ ++G LP E+ E AKL+ YG+TE S LY
Sbjct: 317 GIER--RDLKSVRACISGSAPLPLEVA-ERFERLTGAKLVEGYGLTEASPVTHCNPLY-- 371
Query: 232 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGA 286
G+ + G+ VG P P V+ KV + VG + +G
Sbjct: 372 -----GE--RRLGS-------------VGLPFPGVDAKVVDEEGKELPPGEVGELAVKGP 411
Query: 287 HVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 346
+VM YW++ + + + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE
Sbjct: 412 NVMKGYWNR-PEETQKTLKDGWLFTGDLAKMDEDGYFYIVDRKKDMIIAGGYNIYPREVE 470
Query: 347 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 406
VL QH + VVG+ + E V A + L+ +Q S D +
Sbjct: 471 EVLYQHEAVQEAAVVGVPDPYRGETVAAFLVLKPEYQGKVSEKD--------------IE 516
Query: 407 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
+ CR+ NL +K PR+ + +R+ P +S GKI R E+R E
Sbjct: 517 RFCRQ-NLAAYKVPRI-IQFRESLPKSSVGKILRRELREE 554
>gi|384431610|ref|YP_005640970.1| long-chain-fatty-acid--CoA ligase [Thermus thermophilus
SG0.5JP17-16]
gi|333967078|gb|AEG33843.1| Long-chain-fatty-acid--CoA ligase [Thermus thermophilus
SG0.5JP17-16]
Length = 548
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 189/386 (48%), Gaps = 50/386 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGE-DDVYLHTAPLCHIGGLSSAMAM-L 128
+T GTTG KG +++H L +L A I + E ++V L P H+ G++ AM + L
Sbjct: 203 YTGGTTGLAKGAMLTHRNLSANALQVRAWIPDFREGEEVVLGAIPFFHVYGMTVAMNLAL 262
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ GA V +P+ E K+ +EA+E+H VT VP + ++K + SV+ ++
Sbjct: 263 LGGAKLVLLPRPEIKAIVEAIEKHRVTLFPGVPTLYVAFNNFPGIEK--RDLKSVRACIS 320
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G LP E+ E + AKL+ YG+TE S LY G+ + G+
Sbjct: 321 GSAPLPLEVA-ERFMALTGAKLVEGYGLTEASPVTHCNPLY-------GE--RRLGS--- 367
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVS 303
VG P P V+ KV + VG + +G +VM YW++ + +
Sbjct: 368 ----------VGLPFPGVDAKVVDEEGRELPPGEVGELAVKGPNVMKGYWNR-PEETQKT 416
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL QHP + VVG+
Sbjct: 417 LKDGWLFTGDLAKMDEDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHPAVQEAAVVGV 476
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ E V A + L+ +Q ++ D + CR+ NL +K PR+
Sbjct: 477 PDPYRGETVAAFLVLKPEYQNKVTDKD--------------IETFCRQ-NLAAYKVPRI- 520
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMS 449
+ +R+ P +S GKI + E+++EV +
Sbjct: 521 IQFRESLPKSSVGKILKRELQKEVAA 546
>gi|452879218|ref|ZP_21956348.1| AMP-binding domain protein, partial [Pseudomonas aeruginosa
VRFPA01]
gi|452184192|gb|EME11210.1| AMP-binding domain protein, partial [Pseudomonas aeruginosa
VRFPA01]
Length = 373
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 179/393 (45%), Gaps = 47/393 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ +G D + PL H G + + +
Sbjct: 18 IQYTSGTTGFPKGATLSHYNILNNGYLVGESLGLSTQDRLVIPVPLYHCFGMVMGNLGCV 77
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ P F++++ L AV + T+L VP + +A L ++ S++ +
Sbjct: 78 THGSTMIYPAPSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRGEFDLSSLRTGI 135
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ + A++ AYGMTETS ++ T D LE VT
Sbjct: 136 MAGATCPIEVMRRVIDEMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT 185
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E K+ +G + TRG VML YW+ A
Sbjct: 186 ----------TVGRTQPRLESKIVDQQGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEA 235
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ TGD+ +DD G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 236 IDPARWMHTGDLALMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 295
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + R E +VA ++L + + E LR C+E+ + FK PR
Sbjct: 296 IPDERYGEEIVAWIKLHPGHRADD----------------EQLRAFCKER-IAHFKVPRH 338
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLP 455
F + FP+T TGKI++ +R + ++ LP
Sbjct: 339 FKFVDE-FPMTVTGKIQKFRMREVSIQEVRLLP 370
>gi|241589558|ref|YP_002979583.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12D]
gi|240868270|gb|ACS65929.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12D]
Length = 502
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 174/381 (45%), Gaps = 40/381 (10%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV++SH+ L LA A YLH AP+ H+ + AMA +
Sbjct: 146 IFYTGGTTGFPKGVMLSHTNLCSSGLAAHAEGLAPAGSTYLHAAPMFHLADIGVAMAHWI 205
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G H +P F + L+ + + VT L+ VP ++ L +++ + ++ I G
Sbjct: 206 EGNTHCVVPAFSPEGVLDVLARDRVTHLLLVPTMIQMLVDHPAMRQP-RDLSALWSIAYG 264
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM--TLYDPTLETPGQLPQAFGNVT 247
+ +++ A + P + AYGMTE S T + P T G+L A G T
Sbjct: 265 ASPISEAVLERAMAALPGVGFVQAYGMTELSPLATILPDVYQTPQARTLGKLRSA-GRAT 323
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
C VE + G+ VG ++ RG +VM YW+ KP + V
Sbjct: 324 ---------FCAEVRIVDVEGQEVPRGT--VGEVIVRGPNVMQGYWN----KPEQTAAAV 368
Query: 308 ---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
W+ TGD G +D+ G V++V R I +GGENVY EVE + QHP + V+GI
Sbjct: 369 RNRWMHTGDGGYMDEAGFVFVVDRMKDMIVTGGENVYSAEVENAITQHPAVAACAVIGIP 428
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+A QW ES + +S+E L HC+ + G+K PR
Sbjct: 429 SA----------------QWGESVHAVVVRKPGASVSTEELIAHCKTL-IAGYKCPRSLD 471
Query: 425 LWRKPFPLTSTGKIRRDEVRR 445
PL+ GKI + E+R+
Sbjct: 472 FC-DALPLSGAGKILKTELRK 491
>gi|75075869|sp|Q4R4Z9.1|ACSF2_MACFA RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|67970968|dbj|BAE01826.1| unnamed protein product [Macaca fascicularis]
Length = 618
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 188/403 (46%), Gaps = 70/403 (17%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-----------APLCH- 117
I FTSGTTGSPKG +SH ++ S +I+G + + LH +PL H
Sbjct: 263 IQFTSGTTGSPKGATLSHYNIVNNS----SILG---ERLKLHEKTPEQLRMILPSPLYHC 315
Query: 118 IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
+G + M LM GA + P F K ALEA+ + + L P + D+ +
Sbjct: 316 LGSVGGTMMCLMYGATLILASPVFNGKKALEAISRERGSFLYGTPTMFVDILN----QPD 371
Query: 177 WKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 234
+ D +++ + G P EL++ N L+ AYG TE S
Sbjct: 372 FSSYDISTMRGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------- 417
Query: 235 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHV 288
P F N ++V Q + VG+ PH E ++ + + + G + RG V
Sbjct: 418 -----PVTFANFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGMLAELNTPGELCIRGYCV 471
Query: 289 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 348
ML YW + + W TGDI ++++ G +VGR I GGEN+YP E+E
Sbjct: 472 MLGYWGEPQKTGEAVDQDKWYRTGDIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDF 531
Query: 349 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 408
HP + + VVG+ + R+ E + AC+RL++ + ++E ++
Sbjct: 532 FHTHPKVQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTAEEMKAF 575
Query: 409 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
C+ K ++ FK PR ++++ +PLT++GKI++ ++R ++ HL
Sbjct: 576 CKGK-ISHFKIPR-YIVFVTNYPLTTSGKIQKFKLREQMERHL 616
>gi|407701339|ref|YP_006826126.1| AMP-binding protein [Alteromonas macleodii str. 'Black Sea 11']
gi|407250486|gb|AFT79671.1| AMP-binding domain protein [Alteromonas macleodii str. 'Black Sea
11']
Length = 579
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 201/455 (44%), Gaps = 49/455 (10%)
Query: 5 DESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAP 64
D+++ S L L + +PSL+ ++G + + L + + + L +P
Sbjct: 159 DDTASSTPLSL--SKLPSLKHVYTIGDKPVEGLQAFSALQIEPTEALKSQLLAIESKLSP 216
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-S 123
+ + I FTSGTTG+PKG ++H ++ L + + D PL H G+
Sbjct: 217 DDNINIQFTSGTTGNPKGATLTHRNILNNGLLVSQAMRFTHKDKLCIPVPLYHCFGMVLG 276
Query: 124 AMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+ L GAC VF + F+ ++ L VE+ T L VP + L + +
Sbjct: 277 NLVCLASGACAVFPGESFDPETTLRTVEEEKCTGLHGVPTMFIAELELPNFRDF--DLST 334
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + G P ELM++ + F +++ YG TE S + +T D E
Sbjct: 335 LRTGVMAGSTCPEELMRKVHSEFHMTEVVIGYGQTE-CSPINHITDIDSPFEK------- 386
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFL 297
Q VG+ PH E+K+ + V G I RG VM YW +
Sbjct: 387 ------------QVKTVGRAMPHTEVKIIDAQGNTVSIGEPGEICARGYCVMKGYWGDEV 434
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ E WL +GD+G +D+ G V +VGR I GGEN+YP E+E VL QH +
Sbjct: 435 KTKATIDDEGWLHSGDLGEMDEEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHQDVSD 494
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
V GI + + E V ++ +E+ E E +R + + K L F
Sbjct: 495 AAVFGIPDNKYGEQVCLWIKAKENRHIDE----------------EQIRDYLKSK-LAYF 537
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
K P+ ++ K +P+T TGK+++ ++R ++ LK
Sbjct: 538 KVPK-YISVVKEYPMTVTGKLQKFKMREYMIETLK 571
>gi|109114316|ref|XP_001097818.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Macaca mulatta]
Length = 618
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 188/401 (46%), Gaps = 66/401 (16%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-----------APLCH- 117
I FTSGTTGSPKG +SH ++ S +I+G + + LH +PL H
Sbjct: 263 IQFTSGTTGSPKGATLSHYNIVNNS----SILG---ERLKLHEKTPEQLRMILPSPLYHC 315
Query: 118 IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
+G + M LM GA + P F K ALEA+ + + L P + D+ L + +
Sbjct: 316 LGSVGGTMMCLMYGATLILASPVFNGKKALEAISRERGSFLYGTPTMFVDI--LNQPDFS 373
Query: 177 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
+++ + G P EL++ N L+ AYG TE S
Sbjct: 374 TYDISTMRGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS---------------- 417
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVML 290
P F N ++V Q + VG+ PH E ++ + + + G + RG VML
Sbjct: 418 ---PVTFANFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGMLAELNTPGELCIRGYCVML 473
Query: 291 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 350
YW + + W TGDI ++++ G +VGR I GGEN+YP E+E
Sbjct: 474 GYWGEPQKTGEAVDQDKWYRTGDIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFH 533
Query: 351 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 410
HP + + VVG+ + R+ E + AC+RL++ + ++E ++ C+
Sbjct: 534 THPKVQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTAEEMKAFCK 577
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
K ++ FK PR ++++ +PLT++GKI++ ++R ++ HL
Sbjct: 578 GK-ISHFKIPR-YIVFVTNYPLTTSGKIQKFKLREQMERHL 616
>gi|299533478|ref|ZP_07046858.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
gi|298718535|gb|EFI59512.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
Length = 518
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 184/387 (47%), Gaps = 43/387 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTGSPKGV++ H L +++ ++ + LH AP+ H+ + A+
Sbjct: 163 VFYTGGTTGSPKGVMLCHRNLYTNAISGVSSQIVRAGSIGLHAAPMFHLADGAFMNALFA 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G CHV +P+F+ + L+A+ VT + VP ++ L + K S++++ G
Sbjct: 223 AGGCHVMVPRFDPLAVLQAIASTGVTDTLLVPTMIQMLVDHPDLHK--YDLKSLRQMAYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP---QAFGNV 246
+ L+ A + P + AYGMTE S T ++ PG+ ++ G
Sbjct: 281 ASPISEGLLDRAMRTIPDVDFVQAYGMTEVSPIATILSA--EMHREPGRAKGRHRSAGRA 338
Query: 247 TPNS---VHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 303
T + + P+ G+ P E VG I+ RG VML YW++ A+ +
Sbjct: 339 TACTEVRIVDPE----GREVPRGE----------VGEIVVRGPGVMLGYWNK-PAETEAA 383
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W+ TGD G +DD G V++V R I +GGENVY EVE+V+ HP + V+GI
Sbjct: 384 IRDGWMHTGDGGRMDDEGYVFVVDRIKDMIVTGGENVYSIEVESVIATHPAVASCAVIGI 443
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ E V + L+ QS + +EL+ C+E+ + G+K PR
Sbjct: 444 PHEHWGEQVHVFIVLKPG---------QSLEAQELI-------HFCKER-IAGYKCPR-D 485
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSH 450
V + + PL+ GKI + +R +H
Sbjct: 486 VSFVEAMPLSGAGKILKTSLRAPFWAH 512
>gi|289768167|ref|ZP_06527545.1| acyl-CoA synthetase [Streptomyces lividans TK24]
gi|289698366|gb|EFD65795.1| acyl-CoA synthetase [Streptomyces lividans TK24]
Length = 541
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 136/433 (31%), Positives = 189/433 (43%), Gaps = 55/433 (12%)
Query: 21 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 80
P+LR V +G S D LTA R + + V I +TSGTTG P
Sbjct: 148 PALRETVYIGDPSWD------ALTAGAAAVEQDRVDALAAELSCDDPVNIQYTSGTTGFP 201
Query: 81 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IP 138
KG +SH ++ VGY E D P H G+ + GAC V P
Sbjct: 202 KGATLSHHNILNNGYWVGRTVGYTEQDRVCLPVPFYHCFGMVMGNLGATSHGACIVIPAP 261
Query: 139 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 198
FE + LEAV++ TSL VP + +A L S++ + G P E+M
Sbjct: 262 SFEPAATLEAVQRERCTSLYGVPTMF--IAELNLPDFASYDLTSLRTGIMAGSPCPVEVM 319
Query: 199 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 258
K ++ YGMTETS ++ T D LE H+
Sbjct: 320 KRVVAEMHMEQVSICYGMTETSP-VSLQTRMDDDLE-----------------HRTG--T 359
Query: 259 VGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 312
VG+ PH+E+KV + G + TRG VML YW++ W+ TG
Sbjct: 360 VGRVLPHIEVKVVDPVTGVTLPRGEAGELRTRGYSVMLGYWEEPGKTAEAIDPGRWMHTG 419
Query: 313 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 372
D+ + + G V +VGR I GGEN+YP EVE L HP I + VVG+ + R E V
Sbjct: 420 DLAVMREDGYVEIVGRIKDMIIRGGENIYPREVEEFLYAHPKIADVQVVGVPHERYGEEV 479
Query: 373 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRKPFP 431
+ACV +R++ L+ E LR +C L +K P RL +L FP
Sbjct: 480 LACVVVRDAAD---------------PLTLEELRAYC-AGQLAHYKVPSRLQLL--DSFP 521
Query: 432 LTSTGKIRRDEVR 444
+T +GK+R+ E+R
Sbjct: 522 MTVSGKVRKVELR 534
>gi|317122446|ref|YP_004102449.1| o-succinylbenzoate--CoA ligase [Thermaerobacter marianensis DSM
12885]
gi|315592426|gb|ADU51722.1| O-succinylbenzoate-CoA ligase [Thermaerobacter marianensis DSM
12885]
Length = 608
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 190/418 (45%), Gaps = 72/418 (17%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG V+++ ++A +G DD +L PL H+ GLS ++
Sbjct: 211 IIYTSGTTGRPKGAVLTYGNHFWSAVASALNLGLHRDDRWLCCLPLFHVSGLSIVFRSVI 270
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G V P+F+ + ++E+ VT +I+V A M L ++ + + ++ +L G
Sbjct: 271 YGIPMVLHPRFDPAAVNASIERDRVT-VISVVATM--LQRMLDERGPRPYPEHLRCVLLG 327
Query: 190 GGGLPSELMKE-ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
GG P L++ A S P ++ YGMTET+S F TL P + G+
Sbjct: 328 GGPAPRPLLEACAARSIP---VVQTYGMTETASQ--FATL------APADALRKLGSA-- 374
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVS 303
GKP EL++ D VG I+ RG V Y ++ A + +
Sbjct: 375 -----------GKPLFFNELRIVDDDGRPVPPGEVGEIVVRGPTVTPGYHNRPDAT-ARA 422
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W TGD+G +D+ G +++ RR+ I SGGENVYP E+E+VLL HP + VVG+
Sbjct: 423 WRDGWFHTGDLGYVDEDGYLYVADRRDDLIISGGENVYPAEIESVLLAHPAVEEAGVVGV 482
Query: 364 ANARLTEMVVACVRLRESWQWSESNC---------------------------------- 389
+ ++ VA VRLR +W C
Sbjct: 483 PDPEWGQVPVAVVRLRSPARWEGEACGGERIAGHEGASGRQGQPGRPKGPGDEATGGSAT 542
Query: 390 --DQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
DQ L +LR C E+ L +K PR + +P P T++GK++R +RR
Sbjct: 543 GPDQKGAAGRASLEEALLR-FCAER-LARYKVPRRVLFTTEPLPRTASGKLQRHRLRR 598
>gi|301064315|ref|ZP_07204749.1| AMP-binding enzyme [delta proteobacterium NaphS2]
gi|300441594|gb|EFK05925.1| AMP-binding enzyme [delta proteobacterium NaphS2]
Length = 519
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 182/384 (47%), Gaps = 45/384 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +TSGTTG PKGV+++H + +L IA + + D + H APL H+ + A+
Sbjct: 167 LYYTSGTTGRPKGVMLTHKNVKSHALGTIAELHLTDHDRWFHVAPLFHLADAWATFAITW 226
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
VG HV IP F++ +++ +T +P ++ + V+K S++ +L+G
Sbjct: 227 VGGKHVLIPAFDAGKVCRMIQEEKITLSNLIPTMLNMMVNHPDVQKF--DYASLRVVLSG 284
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD--PTLETPGQLPQAFGNVT 247
G + E +++ +F + I YGMTETS LT L D TL Q F T
Sbjct: 285 GASIAPETVRKIMEAF-QCDYIQTYGMTETSPYLTLSILKDHLKTLTEEEQF--KFKAKT 341
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSD-------GSSHVGRILTRGAHVMLRYWDQFLAKP 300
G+ V L+V + VG I+ +G V YW + +
Sbjct: 342 ------------GREFIGVSLRVVDEQGNDVALDDKQVGEIIVKGDTVTPGYW-RLPEET 388
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+ + WL TGD+ +D V +V R+ I +GGENVY EVE VL HP ++ V
Sbjct: 389 ERAIKDGWLHTGDLAVMDAERYVNIVDRKKDMIITGGENVYSSEVENVLYTHPDVLEAAV 448
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ +A E V ACV L+E+ +S +E++ +CR K L G+K P
Sbjct: 449 IGVPDAHWGEAVKACVVLKEA---------RSVTGEEII-------AYCR-KELAGYKTP 491
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVR 444
+ V + K P T +GKI + +R
Sbjct: 492 K-SVDFLKALPKTGSGKIYKKGLR 514
>gi|456011983|gb|EMF45703.1| Long-chain-fatty-acid--CoA ligase [Planococcus halocryophilus Or1]
Length = 547
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 183/397 (46%), Gaps = 47/397 (11%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IG 119
S P+ + I +TSGTTG PKGV+++H ++ + E D P H G
Sbjct: 185 SMNPDDVINIQYTSGTTGFPKGVMLTHLNVVNNGKIVGDTMALTEKDRLCIPVPFFHCFG 244
Query: 120 GLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
+ MA + V +FE K L+ V+ T L VP + +A L + +
Sbjct: 245 CVLGTMAAVTHSTTMVIAEQFEPKRILQMVQDEKCTGLHGVPTMF--IAELNHPEFSSFD 302
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
+++ + G P E+MK+ N +++ AYG TE+S +T T D +E
Sbjct: 303 TSTLRTGIMAGSSCPIEVMKKVINDMGASEITIAYGQTESSPVIT-QTRADDDIEK---- 357
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW 293
+ VGKP VE+K+ + G + TRG HVM Y+
Sbjct: 358 ---------------RVSTVGKPHAGVEVKIIDPATGETVEIGMPGELCTRGYHVMSGYY 402
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
A E WL TGDI D+ G + + GR + GGEN+YP E+E L QHP
Sbjct: 403 KNEDATKVAIDSEGWLHTGDIAVEDEEGYIDITGRIKDMVIRGGENIYPREIEEFLYQHP 462
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
++ + V+G+ + + E ++A + L+E Q LS+E LR +C+ K
Sbjct: 463 SVLDVQVIGVPDPKYGEELMAWIILKEDEQ----------------LSAEELRTYCKGK- 505
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
++ K PR ++ + K +P+T++GKI++ ++R + H
Sbjct: 506 ISRHKIPR-YIEFTKEYPMTASGKIQKFKLRELSIEH 541
>gi|291007274|ref|ZP_06565247.1| putative feruloyl-CoA synthetase [Saccharopolyspora erythraea NRRL
2338]
Length = 477
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 178/386 (46%), Gaps = 52/386 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAM 127
+I +TSG+TG PKG V+SH L + + +V L APL H L + +
Sbjct: 136 LIMYTSGSTGRPKGAVLSHGNLTWNCVNVLVESDLSGSEVALVAAPLFHTAALGMTCLPT 195
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 185
L+ G V + FE ALE + +H VT L VP + +A + +W+ D SV+
Sbjct: 196 LLKGGTVVLMESFEPAVALELIARHRVTLLFGVPTMYDAIAA----QPSWESADLSSVRT 251
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP----TLETPGQLPQ 241
+L GG +P ++ + + YGMTETS + + DP T +P
Sbjct: 252 LLCGGSPVPDATIRRYLDR--GLVFVQGYGMTETSPGVLIL---DPDAVRTKAGTAGVPS 306
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 301
F +V SV P G V + G I+ RG +VML YW+Q A
Sbjct: 307 FFTDV---SVVDPSGNPVA--------------AGERGEIVVRGPNVMLGYWNQPDATDE 349
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+G W+ +GD+ ++D+ G + +V R I SGGENVYP EVE+ L +HP + VV
Sbjct: 350 ALSGG-WMHSGDVATVDEDGYITIVDRIKDLIISGGENVYPAEVESALYEHPAVELCAVV 408
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E+ A V LR + + D+ LR H R ++L +K P+
Sbjct: 409 GVPDPKWGEVPRAAVVLRPG---AGATADE-------------LRDHLR-RHLAAYKVPK 451
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREV 447
W P T GKIR+ VR +
Sbjct: 452 QVDFWDD-LPRTGAGKIRKQAVRERL 476
>gi|241661951|ref|YP_002980311.1| AMP-binding domain-containing protein [Ralstonia pickettii 12D]
gi|240863978|gb|ACS61639.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12D]
Length = 571
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 204/453 (45%), Gaps = 64/453 (14%)
Query: 15 LQHTAIPSLRWHVSLGSSSS-------DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGA 67
L +P+LRW + +G +++ D V + + D L T + +P+ A
Sbjct: 161 LNAAKLPALRWVIRMGEANTPGMLNFADVVARGKSVPVDALDA-------ITATLSPDDA 213
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMA 126
+ I FTSGTTG+PKG ++H ++ + + E D PL H G + S +
Sbjct: 214 INIQFTSGTTGAPKGATLTHVNVVNNARFVAMAMNLQEGDRLCIPVPLYHCFGMVMSVLT 273
Query: 127 MLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
GAC VF + F+ + L V + T L VP + +A L +++
Sbjct: 274 CTATGACMVFPGEAFDPLATLRTVAEERCTQLHGVPTMF--IAQLDHPDFKSFDVSTLRG 331
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+MK + ++ AYGMTETS P +F +
Sbjct: 332 GIMAGSPCPIEVMKRVVSELNLREVTIAYGMTETS-------------------PVSFQS 372
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAK 299
+ + + + VG+ PH+++K+ DG+ V G + T+G VML YWD AK
Sbjct: 373 AVTDPLDK-RVTTVGRIQPHLQVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD-EAK 429
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ S + W+ TGD+ + D G +VGR + GGENVYP E+E L +HP + +
Sbjct: 430 TAESIHDGWMRTGDLATFDAEGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVN 489
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V G+ + + E V A + L+ Q +E +R C + + +K
Sbjct: 490 VFGVPDPKYGEEVCAWIVLKPGQQATEDE----------------IRAFC-QGQIAHYKI 532
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 533 PR-YIRFVTEMPMTVTGKVQKFVMRDRMIEELK 564
>gi|406575314|ref|ZP_11051021.1| AMP-dependent synthetase and ligase [Janibacter hoylei PVAS-1]
gi|404555291|gb|EKA60786.1| AMP-dependent synthetase and ligase [Janibacter hoylei PVAS-1]
Length = 499
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 178/386 (46%), Gaps = 58/386 (15%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCHIGGLSSAM-A 126
+I +TSGTTG PKG ++H L + + I+G DDV + PL H+ GL+ + A
Sbjct: 156 VILYTSGTTGRPKGAQLTHDNLNLNAQRSAEDIIGIQPDDVIMGCLPLFHVFGLTCGLNA 215
Query: 127 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 186
+ GA IP+F+ ALE + + VT VP + + V +T S++
Sbjct: 216 AVRQGATLTLIPRFDPGKALEVIARDKVTIFEGVPTMYGAMLHHPAVSET--DTSSLRTC 273
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
++GG LP E ++E +F K L+ YG++ETS +F L PT PG
Sbjct: 274 VSGGSSLPGETLREFEETF-KVSLLEGYGLSETSPVASFNMLDQPT--KPG--------- 321
Query: 247 TPNSVHQPQGVCVGKPAPHVELK-VCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKP 300
+G+ P E+K + DG + VG I RG +VM YW +P
Sbjct: 322 -----------TIGRAIPGCEMKLIGEDGQTVGPGEGVGEIAIRGDNVMKGYW----GRP 366
Query: 301 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ + W TGDI S+D+ G +V R+ I GG N+YP E+E VL HP ++
Sbjct: 367 EATEAAIPDGWFRTGDIASVDEDGYYTIVDRKKDLIIRGGMNIYPREIEEVLYTHPDVLE 426
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
VV + + L E V A V LRE E ++Q+ +++ + +
Sbjct: 427 CAVVSVPHPELGEDVGAAVSLREGASG----------------DLEEIKQYVKDR-VAAY 469
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEV 443
K PR + + P TGKI + E+
Sbjct: 470 KYPRTIWVLDE-LPKGPTGKILKREI 494
>gi|410456905|ref|ZP_11310753.1| AMP-dependent synthetase and ligase [Bacillus bataviensis LMG
21833]
gi|409926992|gb|EKN64141.1| AMP-dependent synthetase and ligase [Bacillus bataviensis LMG
21833]
Length = 516
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 181/395 (45%), Gaps = 52/395 (13%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
+ +II FTSG+TG PKG +ISH + + + +DD L P H+GG
Sbjct: 164 DDPLIIIFTSGSTGVPKGALISHRNTFAMAEKTVQTWKFTDDDKILINLPTSHVGGTHDM 223
Query: 125 MAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 181
+A+ L VG V P F L + ++ +T + VP + LI + T D
Sbjct: 224 LAVQLYVGMTGVLSPSFNPSETLRYISKYQITFMGGVPTMFR----LIFQQCTIADYDVN 279
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + GG +L+ NSFP A +++++GMTETS TF + D
Sbjct: 280 SLRLVFLGGEPSSPQLIHRIKNSFPNASVVASWGMTETSGYFTFSGIEDEV--------- 330
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQF 296
N V Q +G KP P +KV DG+ + VG + RG V+ Y D+
Sbjct: 331 -------NLVAQTEG----KPGPENLMKVMRPDGTRADTNEVGELYVRGDSVISSYLDKE 379
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
+ G WL TGD+G +D+ + VGR+ SGG NVYP EVE+ L +PGI
Sbjct: 380 HNLDAFVDG--WLKTGDLGYLDENHYLHFVGRQKEMFISGGYNVYPLEVESYLNSYPGIN 437
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
++ +A+ E+ VA + + L+ E + HCR+ L
Sbjct: 438 ASCLIEVADDIWGEVGVAFIVPEDGAA----------------LNVEEIVNHCRQ-GLAN 480
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+K P+ F + R P T GKI + E+R+ + + +
Sbjct: 481 YKIPKKFFI-RTNLPKTLVGKIAKQEIRKSLETFM 514
>gi|74146500|dbj|BAE32109.1| unnamed protein product [Mus musculus]
Length = 615
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 190/397 (47%), Gaps = 56/397 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSL---AKIAIVGYGEDDVYL-HTAPLCH-IGGLSSA 124
I FTSGTTG+PKG +SH ++ S+ ++ + +++ L +PL H +G +
Sbjct: 260 IQFTSGTTGNPKGATLSHHNIVNNSMLIGQRLKMPTKTAEELRLVLPSPLYHCLGSVGGT 319
Query: 125 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 181
M +M GA + P F K ALEA+ + T L P + D+ + + D
Sbjct: 320 MVSMMHGATLLLSSPSFNGKKALEAISREKGTLLYGTPTMFVDILN----QPDFSSYDFT 375
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P EL++ N +L+ YG TE +S +TFM + TLE Q
Sbjct: 376 SIRGGVIAGSPAPPELIRAIINKMNMKELVVVYGTTE-NSPVTFMNFPEDTLE------Q 428
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 295
G+V G+ PH E ++ + + + G + RG VM YW +
Sbjct: 429 KAGSV-------------GRIMPHTEAQIVNVETGELTNLNVPGELYIRGYCVMQGYWGE 475
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
+ W TGDI +D+ G +VGR I GGEN+YP E+E L+HP +
Sbjct: 476 PQKTFETVGQDKWYRTGDIALMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFLKHPQV 535
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
VVG+ + R+ E + AC+RL+ ++E ++ C+ K ++
Sbjct: 536 QEAQVVGVKDERMGEEICACIRLKSGET----------------TTAEEIKAFCKGK-IS 578
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
FK PR ++++ + +PLT +GKI++ ++R ++ HLK
Sbjct: 579 HFKIPR-YIVFVEGYPLTISGKIQKFKLREQMEQHLK 614
>gi|220913513|ref|YP_002488822.1| AMP-dependent synthetase and ligase [Arthrobacter chlorophenolicus
A6]
gi|219860391|gb|ACL40733.1| AMP-dependent synthetase and ligase [Arthrobacter chlorophenolicus
A6]
Length = 558
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 175/396 (44%), Gaps = 47/396 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P V + +TSGTTG PKG ++H ++ A ++GY E D + P H G+
Sbjct: 200 PHDPVNLQYTSGTTGFPKGATLTHHNILNNGFAIGELLGYTEHDRVVIPVPFYHCFGMVI 259
Query: 124 AMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+ IP F +ALEAV+ TSL VP + +A L
Sbjct: 260 GNLNALSHGAATIIPGRGFSPAAALEAVQDFGGTSLYGVPTMF--IAELALPDFASYDLS 317
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
+++ + G P E+M + YGMTETS T MT TL+
Sbjct: 318 TLRTGVMAGSLCPIEVMNHVIADMNMTDVAICYGMTETSPVST-MTRKGDTLQ------- 369
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 295
H+ + VG+ PH+E K+ S V G + TRG VM YW+Q
Sbjct: 370 ----------HRTE--TVGRTMPHLESKIVDPVSGDVAERGEIGELCTRGYAVMDGYWNQ 417
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
E W+ TGD+ +D G V + GR + GGEN+YP E+E L HP +
Sbjct: 418 PEKTAEAIDAEGWMHTGDLARMDADGYVLVEGRIKDMVIRGGENIYPREIEEFLYTHPAV 477
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ V+G+ + + E ++AC+ L+ + L + + CR K L
Sbjct: 478 QDVQVIGVPDEKYGEELMACIILKPGAE---------------PLDAAAVADFCRGK-LA 521
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+K PR +V R FP+T +GKIR+ E+R+E ++ L
Sbjct: 522 HYKVPR-YVEIRSSFPMTVSGKIRKVEMRQEAVARL 556
>gi|297203377|ref|ZP_06920774.1| dicarboxylate-CoA ligase PimA [Streptomyces sviceus ATCC 29083]
gi|197711466|gb|EDY55500.1| dicarboxylate-CoA ligase PimA [Streptomyces sviceus ATCC 29083]
Length = 528
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 172/384 (44%), Gaps = 49/384 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ ++ Y E D P H G+ +A
Sbjct: 179 IQYTSGTTGFPKGATLSHHNILNNGYFVGELIAYSEQDRICIPVPFYHCFGMVMGNLAAT 238
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GAC V P F+ + L AV+Q TSL VP + +A L S++ +
Sbjct: 239 SHGACMVIPAPSFDPAATLRAVQQEGCTSLYGVPTMF--IAELNLPDFATYDLSSLRTGI 296
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 297 MAGSPCPVEVMKRVVAEMHMAEVSICYGMTETSP-VSLQTRRDDDLE------------- 342
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPS 301
H+ VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 343 ----HRTG--TVGRVLPHIEVKVVDPATGVTQPRGTAGELCTRGYSVMLGYWNEPEKTAE 396
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ ++ + G V +VGR I GGEN+YP E+E L HP I + VV
Sbjct: 397 AVDQGRWMHTGDLATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADVQVV 456
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP- 420
G+ + R E V+ACV R+ + E LR C E L +K P
Sbjct: 457 GVPHERYGEEVLACVIPRDPADPP---------------TLEELRGFC-EGRLAHYKVPS 500
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVR 444
RL +L FP+T +GK+R+ E+R
Sbjct: 501 RLKIL--DAFPMTVSGKVRKVELR 522
>gi|192289994|ref|YP_001990599.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
TIE-1]
gi|192283743|gb|ACF00124.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
TIE-1]
Length = 519
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 167/380 (43%), Gaps = 41/380 (10%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG KGV++SH L V ++ G+ E V LH PL H+G + +
Sbjct: 164 LFYTGGTTGRAKGVMLSHRNLWVNAVVTSLSFGFDETTVALHAGPLFHLGAGARVYTTSI 223
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
+G HV IP+F L A+ QH VT VP ++ + L + S+K I G
Sbjct: 224 MGGRHVVIPRFSPNDVLAAISQHKVTVATFVPTMLGMILQLPDLDS--YDLSSLKLITYG 281
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+P +++ FP + +YGMTE S T ++ D LP A N +
Sbjct: 282 ASPMPEAVLQACLRRFPSIRFGQSYGMTELSPVATILSPAD-------HLPSAPQNRLRS 334
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVST 304
+ G+P E+++ VG ++ RG VM+ YW Q V
Sbjct: 335 A---------GRPIVSAEVRIVDAEDRELKPGEVGEVVVRGPMVMMGYWKQPELTAHVLR 385
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
G W+ TGD G D G +++ R I +GGENVY EVE + HP ++ V+GI
Sbjct: 386 GG-WMHTGDSGRFDADGYLYISDRIKDMIITGGENVYSIEVEHAIAAHPDVLQCAVIGIP 444
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+A+ E V A V R L+++ L CR + +K+PR
Sbjct: 445 HAKWGEAVHAVVVRRPGSS----------------LTTDELITFCRSV-IADYKSPRSIE 487
Query: 425 LWRKPFPLTSTGKIRRDEVR 444
P PL+S KI + +R
Sbjct: 488 FRDDPLPLSSVNKINKAALR 507
>gi|194289655|ref|YP_002005562.1| amp-binding domain protein [Cupriavidus taiwanensis LMG 19424]
gi|193223490|emb|CAQ69495.1| putative Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase
[Cupriavidus taiwanensis LMG 19424]
Length = 574
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 207/448 (46%), Gaps = 60/448 (13%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILK---GYSLRSLP-FTHSWAPEGAVII 70
LQ +PSLR + +G + + M AD+L G + L T A+ +
Sbjct: 164 LQAARLPSLRCVIRMGEGETPGM----MRYADVLARGAGVARAELDRITAQLDRHDAINV 219
Query: 71 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLM 129
FTSGTTG+PKG ++H ++ + + + E D P H G+ S +A +
Sbjct: 220 QFTSGTTGAPKGATLTHRNIVNNARFIAMAMRFSEQDKLCIPVPFYHCFGMVLSVLACVS 279
Query: 130 VGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
GA VF + F+ ++ + AV + T+L VP + +A L + S++ +
Sbjct: 280 TGAAMVFPGEAFDPEATMRAVSEERCTALHGVPTMF--IAQLDHPRFADYDFSSLRTGIM 337
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G P E MK +++ AYGMTETS P +F + T
Sbjct: 338 AGSPCPIETMKRVVAQMHMSEVTIAYGMTETS-------------------PVSFQSSTT 378
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
+ + + + VG+ PH+E+K+ + V G + TRG VML YWD A+ + +
Sbjct: 379 DPLDK-RTTTVGRIQPHLEVKIVDASGAIVPVGEKGELCTRGYSVMLGYWDD-EARTAEA 436
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W+ TGD+ +ID+ G +VGR + GGEN+YP E+E L +HP + + V G+
Sbjct: 437 IRDGWMHTGDLATIDEEGYCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGV 496
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E V A + L+ +E +R CR++ + +K PR +
Sbjct: 497 PDPKYGEEVCAWIVLKPGENATEDE----------------IRAFCRDQ-IAHYKIPR-Y 538
Query: 424 VLWRKPFPLTSTGKIR----RDEVRREV 447
+ + PLT TGK++ RD++ RE+
Sbjct: 539 IRFVDEMPLTVTGKVQKFVMRDQMVREL 566
>gi|134099340|ref|YP_001105001.1| feruloyl-CoA synthetase [Saccharopolyspora erythraea NRRL 2338]
gi|133911963|emb|CAM02076.1| putative feruloyl-CoA synthetase [Saccharopolyspora erythraea NRRL
2338]
Length = 497
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 178/386 (46%), Gaps = 52/386 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAM 127
+I +TSG+TG PKG V+SH L + + +V L APL H L + +
Sbjct: 156 LIMYTSGSTGRPKGAVLSHGNLTWNCVNVLVESDLSGSEVALVAAPLFHTAALGMTCLPT 215
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 185
L+ G V + FE ALE + +H VT L VP + +A + +W+ D SV+
Sbjct: 216 LLKGGTVVLMESFEPAVALELIARHRVTLLFGVPTMYDAIAA----QPSWESADLSSVRT 271
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP----TLETPGQLPQ 241
+L GG +P ++ + + YGMTETS + + DP T +P
Sbjct: 272 LLCGGSPVPDATIRRYLDR--GLVFVQGYGMTETSPGVLIL---DPDAVRTKAGTAGVPS 326
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 301
F +V SV P G V + G I+ RG +VML YW+Q A
Sbjct: 327 FFTDV---SVVDPSGNPVA--------------AGERGEIVVRGPNVMLGYWNQPDATDE 369
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+G W+ +GD+ ++D+ G + +V R I SGGENVYP EVE+ L +HP + VV
Sbjct: 370 ALSGG-WMHSGDVATVDEDGYITIVDRIKDLIISGGENVYPAEVESALYEHPAVELCAVV 428
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E+ A V LR + + D+ LR H R ++L +K P+
Sbjct: 429 GVPDPKWGEVPRAAVVLRPG---AGATADE-------------LRDHLR-RHLAAYKVPK 471
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREV 447
W P T GKIR+ VR +
Sbjct: 472 QVDFWDD-LPRTGAGKIRKQAVRERL 496
>gi|187927421|ref|YP_001897908.1| AMP-binding domain-containing protein [Ralstonia pickettii 12J]
gi|309779879|ref|ZP_07674633.1| AMP-binding enzyme [Ralstonia sp. 5_7_47FAA]
gi|404385126|ref|ZP_10985515.1| hypothetical protein HMPREF0989_01315 [Ralstonia sp. 5_2_56FAA]
gi|187724311|gb|ACD25476.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12J]
gi|308921238|gb|EFP66881.1| AMP-binding enzyme [Ralstonia sp. 5_7_47FAA]
gi|348616549|gb|EGY66049.1| hypothetical protein HMPREF0989_01315 [Ralstonia sp. 5_2_56FAA]
Length = 571
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 204/453 (45%), Gaps = 64/453 (14%)
Query: 15 LQHTAIPSLRWHVSLGSSSS-------DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGA 67
L +P+LRW + +G + + D V + + D L T + +P+ A
Sbjct: 161 LNAAKLPALRWVIRMGEAGTPGMLNFADVVARGKSVPVDALDA-------ITATLSPDDA 213
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMA 126
+ I FTSGTTG+PKG ++H ++ + + E D PL H G + S +
Sbjct: 214 INIQFTSGTTGAPKGATLTHVNVVNNARFVAMAMNLQEGDRLCIPVPLYHCFGMVMSVLT 273
Query: 127 MLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
GAC VF + F+ + L V + T L VP + +A L +++
Sbjct: 274 CTATGACMVFPGEAFDPLATLRTVAEERCTQLHGVPTMF--IAQLDHPDFKSFDVSTLRG 331
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+MK + ++ AYGMTETS P +F +
Sbjct: 332 GIMAGSPCPIEVMKRVVSELNLREVTIAYGMTETS-------------------PVSFQS 372
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAK 299
+ + + + VG+ PH+++K+ DG+ V G + T+G VML YWD AK
Sbjct: 373 AVTDPLDK-RVTTVGRIQPHLQVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD-EAK 429
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ S + W+ TGD+ + D G +VGR + GGENVYP E+E L +HP + +
Sbjct: 430 TAESIHDGWMRTGDLATFDAEGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVN 489
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V G+ + + E V A + L+ Q +E E +R C + + +K
Sbjct: 490 VFGVPDPKYGEEVCAWIVLKPGQQATE----------------EEIRTFC-QGQIAHYKI 532
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 533 PR-YIRFVTEMPMTVTGKVQKFVMRDRMVEELK 564
>gi|264677860|ref|YP_003277766.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
gi|262208372|gb|ACY32470.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
Length = 513
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 187/390 (47%), Gaps = 48/390 (12%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
AP+ ++I +TSGTTG PK ++H + + +LA+ A V +D+ PL H+GG++
Sbjct: 162 APDDLLMIIYTSGTTGRPKAAGLTHRSQLGSALAQHAHVKAAAEDMVQLAMPLNHVGGIT 221
Query: 123 -SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+ ML+ G C +P F ++ L ++H T L+ VP ++ L + + R
Sbjct: 222 CGVLTMLLAGGCCELVPMFSPEALLRMAQKHPPTWLVGVPTMLTLLLMHPLLAEVDMSR- 280
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
++ I+ GG + L++ FP +++ YG++ETS ++ TP Q Q
Sbjct: 281 -LRLIVVGGSNVEPVLLQRLQQQFPGVNIMNLYGLSETSGAIAM---------TPWQADQ 330
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVC-SDG----SSHVGRILTRGAHVMLRYWDQF 296
Q +GKP +L+V +DG S VG + RGA V+ Y Q
Sbjct: 331 -----------QALLHSIGKPLQGAQLRVAGADGEELRSGEVGELWFRGAGVIPAYVGQQ 379
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
+ + G WL +GD+G +D+ G + L GR+ GG NVYP EVE V+ H G++
Sbjct: 380 QDEEVFAGG--WLHSGDLGFVDEQGLIHLKGRQKDMFIQGGFNVYPSEVEGVIAGHAGVL 437
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ +G+ + L E+ + +R SE E L HCR++ L
Sbjct: 438 MVAGIGVPDPVLGEVGRYYIVIRPGASVSE----------------EELLTHCRQQ-LAD 480
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
+K PR V +R PLT GKI++ +R E
Sbjct: 481 YKLPRQLV-FRTELPLTPAGKIQKALLRAE 509
>gi|229103647|ref|ZP_04234328.1| AMP-dependent synthetase and ligase [Bacillus cereus Rock3-28]
gi|228679769|gb|EEL33965.1| AMP-dependent synthetase and ligase [Bacillus cereus Rock3-28]
Length = 522
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 195/393 (49%), Gaps = 50/393 (12%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLSS 123
E I +TSGTTG+PKGV+++H A +VQS I I + ++DV++ +APL HI G++
Sbjct: 168 EDLFCILYTSGTTGTPKGVMVTHRA-VVQSAQTIGIELHCTQEDVFIISAPLFHIFGMAI 226
Query: 124 AM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
M + +G + KF + L+ +EQ VT VP + L K S
Sbjct: 227 NMLCAVAMGGRMILQEKFHPRETLQLIEQEKVTIQKGVPTMFIKELELEDFDKY--DLSS 284
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ L G +P++ + + L ++G+TET S MT YD T +
Sbjct: 285 LRAGLVGAAPIPAKTVTDIRERM-GINLCQSFGITETVS--ITMTSYDDTKQ-------- 333
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFL 297
N+T +GK P V LK+ + VG I +G VM Y++
Sbjct: 334 --NITET---------LGKAIPGVTLKIVDENRVDLPHGEVGEIAVKGFGVMKGYYNMPE 382
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
E W +GD+G++D G + VGR+ I GG NVYP+E+EAV+++HP +I
Sbjct: 383 QTKQALDNEGWYYSGDLGTLDPQGYLRFVGRKKEMIIRGGLNVYPQEIEAVIMKHPKVIE 442
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
VVG+ + L E+ A +RL KN E + S E ++ + +EK + +
Sbjct: 443 AAVVGLPDKVLGEVACAVIRL---------------KNGE-VSSEEEIKLYLKEK-MAIY 485
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P V++ + FP+T++GKI++ ++R +V S+
Sbjct: 486 KLPEK-VIFTEEFPVTASGKIQKLKLREQVSSN 517
>gi|24418933|ref|NP_722502.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Mus
musculus]
gi|81901906|sp|Q8VCW8.1|ACSF2_MOUSE RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|17390865|gb|AAH18371.1| Acyl-CoA synthetase family member 2 [Mus musculus]
gi|26329787|dbj|BAC28632.1| unnamed protein product [Mus musculus]
gi|38649240|gb|AAH63269.1| Acyl-CoA synthetase family member 2 [Mus musculus]
gi|148683985|gb|EDL15932.1| cDNA sequence BC018371, isoform CRA_b [Mus musculus]
gi|148683986|gb|EDL15933.1| cDNA sequence BC018371, isoform CRA_b [Mus musculus]
Length = 615
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 190/397 (47%), Gaps = 56/397 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSL---AKIAIVGYGEDDVYL-HTAPLCH-IGGLSSA 124
I FTSGTTG+PKG +SH ++ S+ ++ + +++ L +PL H +G +
Sbjct: 260 IQFTSGTTGNPKGATLSHHNIVNNSMLIGQRLKMPTKTAEELRLVLPSPLYHCLGSVGGT 319
Query: 125 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 181
M +M GA + P F K ALEA+ + T L P + D+ + + D
Sbjct: 320 MVSMMHGATLLLSSPSFNGKKALEAISREKGTLLYGTPTMFVDILN----QPDFSSYDFT 375
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P EL++ N +L+ YG TE +S +TFM + TLE Q
Sbjct: 376 SIRGGVIAGSPAPPELIRAIINKMNMKELVVVYGTTE-NSPVTFMNFPEDTLE------Q 428
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 295
G+V G+ PH E ++ + + + G + RG VM YW +
Sbjct: 429 KAGSV-------------GRIMPHTEAQIVNVETGELTNLNVPGELYIRGYCVMQGYWGE 475
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
+ W TGDI +D+ G +VGR I GGEN+YP E+E L+HP +
Sbjct: 476 PQKTFETVGQDKWYRTGDIALMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFLKHPQV 535
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
VVG+ + R+ E + AC+RL+ ++E ++ C+ K ++
Sbjct: 536 QEAQVVGVKDERMGEEICACIRLKSGET----------------TTAEEIKAFCKGK-IS 578
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
FK PR ++++ + +PLT +GKI++ ++R ++ HLK
Sbjct: 579 HFKIPR-YIVFVEGYPLTISGKIQKFKLREQMEQHLK 614
>gi|357039422|ref|ZP_09101216.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355358321|gb|EHG06089.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 559
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 182/398 (45%), Gaps = 47/398 (11%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IG 119
S P+ + + +TSGTTG PKGV+++H+ +I + ++ + + DD P H G
Sbjct: 191 SLHPDEVINMQYTSGTTGFPKGVMLTHTNIIGNAFSQAECLNFTPDDCLCIPVPFFHCFG 250
Query: 120 GLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
+ M ++ GA + F +K+ LE VE++ T+L VP + +A L ++K
Sbjct: 251 CVMGTMLCVVSGAAMAPVESFNAKNVLETVERNSCTALHGVPTMF--IAELEEMEKNKYN 308
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
++++ + G P E+MK N +++ YG TE S +T DP
Sbjct: 309 TNALRTGIMAGSPCPIEVMKSVVNKMGASEICITYGQTEASPGITMTRATDPI------- 361
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYW 293
Q + VG+ P+VE+K+ + G + TRG HVM Y+
Sbjct: 362 -------------QLRVSTVGRALPNVEVKIVDPETGEELLPGMQGELCTRGYHVMKGYY 408
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
A E WL TGD+ +D+ G + GR I GGEN+YP E+E L +P
Sbjct: 409 KMPEATAQTVDREAWLHTGDLAVMDENGYCKITGRLKDMIIRGGENIYPREIEEFLYTNP 468
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
I + VVG+ + R E VVA V+L+ E+ + K + +H
Sbjct: 469 KIKDVQVVGVPSERYGEEVVAFVQLKPGEIAEEAEIKEFCNGK--------IARH----- 515
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
K P F+L+ +P T++GKI++ ++R V L
Sbjct: 516 ----KIPA-FILFIGEYPSTASGKIQKYKLREMVTKVL 548
>gi|325675420|ref|ZP_08155104.1| substrate-CoA ligase [Rhodococcus equi ATCC 33707]
gi|325553391|gb|EGD23069.1| substrate-CoA ligase [Rhodococcus equi ATCC 33707]
Length = 550
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 170/389 (43%), Gaps = 59/389 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-------- 121
I +TSGTTG PKG +SH ++ + GY E D P H G+
Sbjct: 197 IQYTSGTTGFPKGATLSHHNILNNGYFVGELCGYTEHDRVCIPVPFYHCFGMVMGNLACT 256
Query: 122 SSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
S AM++ G P FE + L AV+ TSL VP + +A L
Sbjct: 257 SHGAAMVIPG------PAFEPAATLAAVQAERCTSLYGVPTMF--IAELADPDFDSYDLS 308
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
++ + G P E+MK+ A++ YGMTETS P
Sbjct: 309 CLRTGIMAGSPCPVEVMKQVIERMGMAEVSICYGMTETS-------------------PV 349
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQ 295
+ +S+ Q + VG+ PH+E+K+ + G + TRG VML YW+
Sbjct: 350 SLQTRRDDSIDQ-RVSTVGRVGPHLEVKIVDPATGLTVPRGEAGELCTRGYSVMLGYWNN 408
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
W+ TGDIG +D G V + GR + GGENVYP E+E L HP I
Sbjct: 409 PEKTSEAIDSARWMHTGDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDI 468
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ V+G+ +A+ E ++ +R+RE Q L + +R+ C + L
Sbjct: 469 LDAQVIGVPDAKYGEELMVWIRMREGAQ---------------PLDVDKVREFCTGR-LA 512
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+K PR +V FP+T TGKIR+ E+R
Sbjct: 513 HYKIPR-YVHLVDEFPMTVTGKIRKVEMR 540
>gi|378720187|ref|YP_005285076.1| AMP-binding domain-containing protein [Gordonia polyisoprenivorans
VH2]
gi|375754890|gb|AFA75710.1| AMP-binding domain-containing protein [Gordonia polyisoprenivorans
VH2]
Length = 508
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 185/392 (47%), Gaps = 52/392 (13%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
A + +I +TSGTTG PKG +++H L ++ + + D+ APL HIGGL+
Sbjct: 153 ASDAIAVIMYTSGTTGRPKGAMLTHGNLFWNNMNSLLCLDVETSDISYCAAPLFHIGGLN 212
Query: 123 -SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+ + L G V P F+ +AL ++E+H VT++ VPA+ ++ + + +
Sbjct: 213 VTTLVTLQKGGHIVLAPTFDPAAALASIEKHRVTTMFGVPAMFLFMSQVPQFETA--DLS 270
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ ++ GG +P LM+ YG+TET+ M L E+ ++
Sbjct: 271 SLRYLICGGAPVPEPLMRRYAER--GLAFAQGYGLTETAPLALVMGLD----ESAAKIGA 324
Query: 242 AFGNVTP-------NSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWD 294
A V P ++ + P V VG P G + RG VM+ YW
Sbjct: 325 AGNKVLPLSDVRLVDATNSP--VPVGTP----------------GEVCVRGPQVMVGYWR 366
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
A +V E W TGDIG DD G +++V R + +GGENVYP EVE+VL HP
Sbjct: 367 NQAATDAVIDDEGWFHTGDIGREDDDGYIYVVDRVKDMVITGGENVYPAEVESVLYSHPA 426
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ I ++G+ +A+ E V A + ++ +E+ L E LR +++ L
Sbjct: 427 VAEIAILGLPDAKWGEAVTAVI--------------ATAPGQEVTL--EELRDFAKDQ-L 469
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
+K P L + + P +GK+ + ++R +
Sbjct: 470 ARYKLP-LRLEFVDALPRNPSGKVLKYQLREQ 500
>gi|448237203|ref|YP_007401261.1| long-chain-fatty-acid--CoA ligase [Geobacillus sp. GHH01]
gi|445206045|gb|AGE21510.1| long-chain-fatty-acid--CoA ligase [Geobacillus sp. GHH01]
Length = 539
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 202/434 (46%), Gaps = 62/434 (14%)
Query: 27 VSLGSSSSDFVNKRDMLTADILKGYS--LRSLPF--THSWAPEGAVIICFTSGTTGSPKG 82
VSLG+ SS + + D+ + L S +R +P H A ++ +T GTTG KG
Sbjct: 149 VSLGAPSSVALAEGDVTFDEFLAAGSGVVRPVPIEPMHDVA-----VLQYTGGTTGRSKG 203
Query: 83 VVISHSALIVQSLAKIAIVG----YGEDDVYLHTAPLCHIGGLSSAMAMLMV-GACHVFI 137
+++H + L +G++ YL PL H+ ++S M + + GA ++ +
Sbjct: 204 AMLTHRNIFANVLQCAEFFKGTFEFGKER-YLTVIPLFHVFAMTSGMNLAIYQGAENILL 262
Query: 138 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 197
P+FE K LE + T VP + + V++ G S+K +G +P EL
Sbjct: 263 PRFELKEVLETIRDKQPTVFPGVPTMYVAITNTPGVEQY--GISSIKTCNSGSAPMPLEL 320
Query: 198 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 257
M++ + A ++ YG++E S +T +P P + +P V
Sbjct: 321 MRD-FEAKTGAVVLEGYGLSEASP----VTHCNP----------------PFAARKPGTV 359
Query: 258 CVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 312
+G P ++ + G+ VG ++ RG VM YW+ + +V+ + WL TG
Sbjct: 360 GIGMPLTEYKVVDVATGTQELPPGEVGELIIRGPQVMKGYWN-MPEETAVALRDGWLYTG 418
Query: 313 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 372
D+ SID+ G V +V R+ I +GG N+YP E+E VL +HP + VG+ + E V
Sbjct: 419 DLASIDEEGYVTIVDRKKDLIIAGGYNIYPREIEEVLYEHPAVKEAAAVGVPDPYRGETV 478
Query: 373 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 432
A + L++ Q SE + + HCR KNL +K PR+ V +R P
Sbjct: 479 KAIIVLKDGQQASEED----------------ILAHCR-KNLAAYKVPRI-VEFRAELPK 520
Query: 433 TSTGKIRRDEVRRE 446
T+ GKI R +R E
Sbjct: 521 TNVGKILRRALREE 534
>gi|355568519|gb|EHH24800.1| hypothetical protein EGK_08523, partial [Macaca mulatta]
Length = 639
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 188/403 (46%), Gaps = 70/403 (17%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-----------APLCH- 117
I FTSGTTGSPKG +SH ++ S +I+G + + LH +PL H
Sbjct: 284 IQFTSGTTGSPKGATLSHYNIVNNS----SILG---ERLKLHEKTPEQLRMILPSPLYHC 336
Query: 118 IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
+G + M LM GA + P F K ALEA+ + + L P + D+ +
Sbjct: 337 LGSVGGTMMCLMYGATLILASPVFNGKKALEAISRERGSFLYGTPTMFVDILN----QPD 392
Query: 177 WKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 234
+ D +++ + G P EL++ N L+ AYG TE S
Sbjct: 393 FSSYDISTMRGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------- 438
Query: 235 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHV 288
P F N ++V Q + VG+ PH E ++ + + + G + RG V
Sbjct: 439 -----PVTFANFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGMLAELNTPGELCIRGYCV 492
Query: 289 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 348
ML YW + + W TGDI ++++ G +VGR I GGEN+YP E+E
Sbjct: 493 MLGYWGEPQKTGEAVDQDKWYRTGDIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDF 552
Query: 349 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 408
HP + + VVG+ + R+ E + AC+RL++ + ++E ++
Sbjct: 553 FHTHPKVQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTAEEMKAF 596
Query: 409 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
C+ K ++ FK PR ++++ +PLT++GKI++ ++R ++ HL
Sbjct: 597 CKGK-ISHFKIPR-YIVFVTNYPLTTSGKIQKFKLREQMERHL 637
>gi|398816440|ref|ZP_10575089.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. BC25]
gi|398032461|gb|EJL25798.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. BC25]
Length = 521
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 183/389 (47%), Gaps = 50/389 (12%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
A E V I +TSGT PKGV+++H ++I + ++ I G +DDV +H PL H L
Sbjct: 168 ADEDVVQILYTSGTESKPKGVMLTHKSIISEYVSAIIEGGMTQDDVAIHALPLFHSAQLH 227
Query: 123 SAMA-MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+ + +G + + + LE VE + T L P + +A L +
Sbjct: 228 CFLGPYVYLGGSGIILEQATPALMLETVEAYKATQLFCPPTVW--IALLRSPDFAARNLS 285
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++K G +P E++KE P A+ + YG TE + T L+ Q+ +
Sbjct: 286 SLQKCYYGAAIMPVEVLKELGLRLPNAQFYNFYGQTEVAPLAT-------VLQPKDQMRK 338
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQ 295
A GKPA +VE K+ D + V G I+ R +H ML Y+ D+
Sbjct: 339 AG--------------SAGKPALNVETKIVDDDGNEVLRGSVGEIVHRTSHAMLGYFRDE 384
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
+ + G W +GD+G +DD G + +V R+ IKSGGENV EVE ++ QHP +
Sbjct: 385 EKTQAAFQGG--WFHSGDLGIMDDEGYITVVDRKKDMIKSGGENVASREVEELIYQHPKV 442
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ V+G+ + E V A V K ELL + E+L C+++ L+
Sbjct: 443 SEVAVIGVPHPYWIEAVTAVV---------------VPKAGELLTADEML-VFCKDR-LS 485
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
FKAP+ +V+ P +GKI + E+R
Sbjct: 486 SFKAPK-YVVIADNLPRNPSGKILKRELR 513
>gi|429505407|ref|YP_007186591.1| AMP-binding protein [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|429486997|gb|AFZ90921.1| AMP-binding domain protein [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 546
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 183/389 (47%), Gaps = 49/389 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLM 129
+TSGTTG PKGV++SH IV + A IA + D P H G + +A +
Sbjct: 197 YTSGTTGFPKGVMLSHFN-IVNNAANIAECMKLTSSDRLCIPVPFFHCFGCVLGVLACVS 255
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GA + I +F + L+ VEQ T+L VP + +A L + + V+ +
Sbjct: 256 AGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLNDSRFSEYDLSHVRTGIMA 313
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P+E+M+E + AYG TE S +T T D + E +
Sbjct: 314 GSPCPAEVMREVIGKMGMTDITIAYGQTEASPVIT-QTRTDDSFERRVE----------- 361
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 303
G+ PH+E+++ G+S G + TRG HVM Y+ A
Sbjct: 362 --------TAGRALPHIEVRIVRPGTSGEAARGEQGELCTRGYHVMKGYYKNQEATEEAI 413
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + + VVG+
Sbjct: 414 DKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGV 473
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E A +RL++ Q++ S+E +R C+E ++ +K PR +
Sbjct: 474 PDPKYGEEAAAWIRLKDG---------QTA-------SAEDIRTFCKE-HIARYKVPR-Y 515
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
VL+ +P+ +GKI++ ++R + + LK
Sbjct: 516 VLFTDEYPMAVSGKIQKFKLREKTIEELK 544
>gi|429215399|ref|ZP_19206561.1| AMP-binding protein [Pseudomonas sp. M1]
gi|428154626|gb|EKX01177.1| AMP-binding protein [Pseudomonas sp. M1]
Length = 556
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 177/391 (45%), Gaps = 49/391 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ +G E D + PL H G+ + +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGESIGLTEHDRLVIPVPLYHCFGMVMGNLGCM 265
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA ++ P FE ++ L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGATMIYPAPSFEPEATLAAVAEERATALYGVPTMF--IAELDHPRRAEFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ N A++ AYGMTETS ++ T D LE VT
Sbjct: 324 MAGATCPIEVMRRVINEMHMAEVQIAYGMTETSP-VSLQTGPDDELEI---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
VG+ P +E K+ DG + G + TRG VML YW+ A
Sbjct: 374 ----------TVGRTQPQLESKII-DGDGRIVPRGTIGELCTRGYSVMLGYWNNPQATAE 422
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ W+ TGD+ +D+ GNV +VGR I GGEN+YP E+E L H + V+
Sbjct: 423 AISPARWMLTGDLAVMDEAGNVRIVGRSKDMIIRGGENIYPREIEEFLYTHHAVADAQVI 482
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI + + E +VA V+ E E LR C+ + + FK PR
Sbjct: 483 GIPDDKYGEELVAWVKFHPGHGVDE----------------EELRAFCKAR-IAHFKVPR 525
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
F + FP+T TGKI++ +R + L+
Sbjct: 526 YFRFCDE-FPMTVTGKIQKFRMREISIEELR 555
>gi|379746120|ref|YP_005336941.1| feruloyl-CoA synthetase [Mycobacterium intracellulare ATCC 13950]
gi|379753366|ref|YP_005342038.1| feruloyl-CoA synthetase [Mycobacterium intracellulare MOTT-02]
gi|378798484|gb|AFC42620.1| feruloyl-CoA synthetase [Mycobacterium intracellulare ATCC 13950]
gi|378803582|gb|AFC47717.1| feruloyl-CoA synthetase [Mycobacterium intracellulare MOTT-02]
Length = 499
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 194/416 (46%), Gaps = 43/416 (10%)
Query: 42 MLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIV 101
++T+D + + P + P+ ++ FTSGTT PK V ++H+ L +
Sbjct: 116 VMTSDEFIETARSTEPVSVFADPDDVAVVLFTSGTTSRPKAVELTHNNLTSYVTGTVEFG 175
Query: 102 GYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 161
D L P HI G+ +A++ L G V++ +F+ + V VT+ VP
Sbjct: 176 SADPADAALVCVPPYHIAGVGAALSNLYAGRAIVYLRRFDPHEWVRLVRDERVTTATVVP 235
Query: 162 AIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 221
+++ + ++ ++ +++ GG + L++ A + P+ ++AYG+TETSS
Sbjct: 236 TMLSRIVAVL--EQQSAELPTLRNFAYGGSKVARPLVRRALDLLPQVGFVNAYGLTETSS 293
Query: 222 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSS 276
++ +T D L + +T VG+P P +E+++ ++ G
Sbjct: 294 TIAVLTPEDHRLAHEARDDAVARRLT----------SVGRPVPGIEVQIRAEDGTVLGPG 343
Query: 277 HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSG 336
G + RG V RY + SV + W T D+ +D+ G +++ GR + I G
Sbjct: 344 ETGELFVRGPQVSGRYTE----IGSVLDAQGWFATRDVAMLDEDGYLFIGGRSDDTIIRG 399
Query: 337 GENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 396
GEN+ P EVE VL++HP + +VVVG+ +A + +VA + ES+
Sbjct: 400 GENIAPSEVEDVLIEHPDVREVVVVGLDDAEWGQAIVAVI-------VPESDTAP----- 447
Query: 397 ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ E LR+ R K L G + P V +R P T TGK+ +RRE++ LK
Sbjct: 448 ----APEQLREFARSK-LRGSRTPDRIV-FRDELPTTPTGKV----LRREILEDLK 493
>gi|312199048|ref|YP_004019109.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
gi|311230384|gb|ADP83239.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
Length = 512
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 188/397 (47%), Gaps = 47/397 (11%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
++ FTSGTT +PK V++ HS L+ L + EDD L + P H+ G+ + + L
Sbjct: 154 VLLFTSGTTSAPKRVILRHSNLVSYVLGTVDFASAEEDDAILVSVPPYHVAGIGTVLTNL 213
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS----VK 184
G ++P FE+++ L+ V +T+++ VP + L+RV +T G+ + ++
Sbjct: 214 YSGRRICYLPNFEAQAWLDLVRSEQITNVMLVPTM------LVRVVETLGGKPADAPHLR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
I GG +P ++++ A +FP+ ++AYG+TETSS++ + P +AF
Sbjct: 268 SIAYGGARMPGKVLEAALGAFPETGFVNAYGLTETSSTIAVL--------GPDDHREAFA 319
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 299
+ P +V G G+P P VE ++ D + V G + RG V Y
Sbjct: 320 SDDP-AVRARLG-SAGRPVPGVEFEIRDDAGTPVGVGEPGLLWVRGEQVSGEYE----GL 373
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
SV E W T D +D G V++ GR + I GGEN+ P E+E VL +H + +
Sbjct: 374 GSVLDAEGWFPTKDGAFVDADGYVFITGRSDDTIIRGGENIAPAEIEDVLGRHEKLRDVA 433
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V G + + +VA V L + + D+ LR + R K L G +
Sbjct: 434 VYGAPDDTWGQRIVAAVVLHDG---ETATVDE-------------LRDYVRGK-LRGSRT 476
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPS 456
P V + P T TGK+ R++V V +S+ S
Sbjct: 477 PDEVVFLGE-LPYTPTGKLLRNQVAALVADQAESVGS 512
>gi|39934486|ref|NP_946762.1| fatty-acid--CoA ligase [Rhodopseudomonas palustris CGA009]
gi|39648335|emb|CAE26855.1| putative fatty-acid--CoA ligase [Rhodopseudomonas palustris CGA009]
Length = 519
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 169/380 (44%), Gaps = 41/380 (10%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG KGV++SH L V ++ G+ E V LH PL H+G + +
Sbjct: 164 LFYTGGTTGRAKGVMLSHRNLWVNAVVTSLSFGFDETTVALHAGPLFHLGAGARVYTTSI 223
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
+G HV IP+F K L A+ H VT VP ++ + L + S+K I G
Sbjct: 224 MGGRHVVIPRFAPKDVLAAISHHKVTVATFVPTMLGMILQLPDLDS--YDLSSLKLITYG 281
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+P +++E FP + +YGMTE S T ++ D LP A P
Sbjct: 282 ASPMPEAVLQECLRRFPSIRFGQSYGMTELSPVATILSPDD-------HLPSA-----PR 329
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVST 304
H+ + G+P E+++ VG ++ RG VM+ YW Q V
Sbjct: 330 --HRLR--SAGRPVVSAEVRIVDAEDRQLKPGEVGEVVVRGPMVMMGYWKQPELTAHVLR 385
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
G W+ TGD G D G +++ R I +GGENVY EVE + HP ++ V+G+
Sbjct: 386 GG-WMHTGDSGRFDTEGYLYISDRIKDMIITGGENVYSIEVENAIAAHPDVLQCAVIGVP 444
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+A+ E V A V R L+++ L CR + +K+PR
Sbjct: 445 HAKWGEAVHAVVVRRPGSS----------------LTTDELITFCRSV-IADYKSPRSIE 487
Query: 425 LWRKPFPLTSTGKIRRDEVR 444
P PL+S KI + +R
Sbjct: 488 FRDDPLPLSSVNKINKAALR 507
>gi|374611314|ref|ZP_09684101.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
gi|373549442|gb|EHP76109.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
Length = 496
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 182/391 (46%), Gaps = 39/391 (9%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
PE ++ FTSGTT PK V ++H+ L + G D L P HI G+S+
Sbjct: 138 PEDVGVVLFTSGTTSRPKAVELTHNNLTSYITGTVEFDGADPGDAALICVPPYHIAGVSA 197
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
A++ L G V++P+F + + V VTS VP ++ + + + + S+
Sbjct: 198 ALSNLYAGRKMVYLPQFGAAEWVRLVRDEGVTSATVVPTMLDRIVSALDSQPV--ALPSL 255
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + GG + L+++A P+ ++AYG+TETSS++ + TP A
Sbjct: 256 RNLAYGGSKVALPLVRKALGLLPEVGFVNAYGLTETSSTIAVL--------TPDDHRDAM 307
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLA 298
+ T +V + G VG+P P VEL++ SD G+ G + RG V RY +
Sbjct: 308 AS-TDVTVTRRLG-SVGQPVPGVELQIRSDDGTVLGAGETGELFVRGEQVSGRYAE---- 361
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
SV E W T D+ IDD G +++ GR + I GGEN+ P E+E VL++HP +
Sbjct: 362 IGSVLDAEGWFPTKDVAWIDDAGYLFIGGRSDDTIIRGGENIAPAEIEDVLVEHPLVHDC 421
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG + QW + + LR+H R + L G +
Sbjct: 422 AVVG----------------PDDPQWGQIIVAVVVPAAGAKPDPDELREHVRSQ-LRGSR 464
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMS 449
P V++R P +TGK+ R E+ +E+ +
Sbjct: 465 TPDR-VVFRDELPTNATGKVLRRELVQELTA 494
>gi|355753990|gb|EHH57955.1| hypothetical protein EGM_07709, partial [Macaca fascicularis]
Length = 639
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 188/401 (46%), Gaps = 66/401 (16%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-----------APLCH- 117
I FTSGTTGSPKG +SH ++ S +I+G + + LH +PL H
Sbjct: 284 IQFTSGTTGSPKGATLSHYNIVNNS----SILG---ERLKLHEKTPEQLRMILPSPLYHC 336
Query: 118 IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
+G + M LM GA + P F K ALEA+ + + L P + D+ L + +
Sbjct: 337 LGSVGGTMMCLMYGATLILASPVFNGKKALEAISRERGSFLYGTPTMFVDI--LNQPDFS 394
Query: 177 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
+++ + G P EL++ N L+ AYG TE S
Sbjct: 395 TYDISTMRGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS---------------- 438
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVML 290
P F N ++V Q + VG+ PH E ++ + + + G + RG VML
Sbjct: 439 ---PVTFANFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGMLAELNTPGELCIRGYCVML 494
Query: 291 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 350
YW + + W TGDI ++++ G +VGR I GGEN+YP E+E
Sbjct: 495 GYWGEPQKTGEAVDQDKWYRTGDIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFH 554
Query: 351 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 410
HP + + VVG+ + R+ E + AC+RL++ + ++E ++ C+
Sbjct: 555 THPKVQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTAEEMKAFCK 598
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
K ++ FK PR ++++ +PLT++GKI++ ++R ++ HL
Sbjct: 599 GK-ISHFKIPR-YIVFVTNYPLTTSGKIQKFKLREQMERHL 637
>gi|311068394|ref|YP_003973317.1| AMP-binding protein [Bacillus atrophaeus 1942]
gi|419823695|ref|ZP_14347237.1| AMP-binding domain protein [Bacillus atrophaeus C89]
gi|310868911|gb|ADP32386.1| AMP-binding domain protein [Bacillus atrophaeus 1942]
gi|388472185|gb|EIM08966.1| AMP-binding domain protein [Bacillus atrophaeus C89]
Length = 548
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 184/392 (46%), Gaps = 49/392 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMV 130
+TSGTTG PKGV++SH +I + + D P H G + +A +
Sbjct: 197 YTSGTTGFPKGVMLSHFNIINNAANIAECMKLSSTDRMCIPVPFFHCFGCVLGVLACVSA 256
Query: 131 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
GA + + +F+ + L AVEQ T+L VP + +A L ++ + G
Sbjct: 257 GAAMIPVQEFDPAAVLTAVEQEKCTALHGVPTMF--IAELHHKHFPSYDLSHLRTGIMAG 314
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P E+MK ++ AYG TE S +T T D +L
Sbjct: 315 SACPIEVMKAVIERMGMKEITIAYGQTEASPVIT-QTRADDSL----------------- 356
Query: 251 VHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVST 304
Q + VG+ PH+E+K+ G+S G + TRG HVM Y+ A S
Sbjct: 357 --QRRVETVGRALPHIEVKIVQPGTSREVARGVQGELCTRGYHVMKGYYKDPEATASAID 414
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L QHP ++ + VVG+
Sbjct: 415 ADGWLHTGDLAVMDEQGYCRITGRLKDMLIRGGENIYPREIEELLYQHPKVLDVQVVGVP 474
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+A+ E A V+L+E Q++ S E L+ +C+ K + K PR ++
Sbjct: 475 DAKFGEEAAAWVKLKEG---------QTA-------SPEELQAYCKGK-IARHKIPR-YI 516
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMS--HLKSL 454
++ +P+T++GKI++ ++R + + HL S
Sbjct: 517 VFTNEYPMTASGKIQKFKLREKAIQQFHLSSF 548
>gi|118465556|ref|YP_882835.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
gi|118166843|gb|ABK67740.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
Length = 510
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 180/387 (46%), Gaps = 54/387 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIV----GYGEDDVYLHTAPLCHIGGLSSAM 125
+ +TSGTTG PKGV +H A + + I + GED L + PL H+ G +S +
Sbjct: 162 LFYTSGTTGHPKGVPTTHEAFLTNTENAIRCLQQPRDLGEDMRTLISVPLFHVTGCNSQL 221
Query: 126 -AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 182
A +G V +P + + L AV V+ ++TVPAI A L+ K + G +
Sbjct: 222 LAAARLGGASVILPALDLDTLLNAVVAERVSVMVTVPAIYA----LLLRHKDFAGTNVSR 277
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
V+ + GG + L++ ++FP A + + YGMTET+S +T
Sbjct: 278 VRWVGYGGAPIAPSLVRTVKDAFPHATVFNGYGMTETASLMT------------------ 319
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVC--SDGSSHVGRILTRGAHVMLRYWDQFLAKP 300
V P+ VG P V+L + D VG ++TRG +V YW++ A
Sbjct: 320 ---VLPDREAVEHADSVGYAVPSVDLGLIPFGDNEPGVGELVTRGGNVTAGYWNRPQATA 376
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
S G WL TGD+ +DD G V ++ R I GGENV EVEAVLL PG+ V
Sbjct: 377 STFAGG-WLHTGDVVRVDDAGRVHIIDRLKDIINRGGENVSSVEVEAVLLGAPGVADACV 435
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ + + E V A + + + + D + + +HCR + L FK P
Sbjct: 436 LGVPDDVMGEKVGAVL-------FGDDDIDVPA-----------VLEHCRGR-LADFKVP 476
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREV 447
+ + P P + GK+ + +R +V
Sbjct: 477 QYITVVDGPLPRNAGGKLLKARLRDQV 503
>gi|392983887|ref|YP_006482474.1| AMP-binding protein [Pseudomonas aeruginosa DK2]
gi|419753428|ref|ZP_14279832.1| AMP-binding domain protein [Pseudomonas aeruginosa PADK2_CF510]
gi|384400550|gb|EIE46909.1| AMP-binding domain protein [Pseudomonas aeruginosa PADK2_CF510]
gi|392319392|gb|AFM64772.1| AMP-binding domain protein [Pseudomonas aeruginosa DK2]
Length = 564
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 178/392 (45%), Gaps = 47/392 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ A +G G +D + PL H G + + +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGASLGLGAEDRLVIPVPLYHCFGMVMGNLGCV 265
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ P F++++ L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTMIYPAPSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 324 MAGATCPIEVMRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E K+ +G + TRG VML YW+ A
Sbjct: 374 ----------TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDSQATAEA 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ TGD+ +DD G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDPARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + R E +VA ++L + E LR C+ + + FK PR
Sbjct: 484 IPDERYGEEIVAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRH 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
F + FP+T TGKI++ +R + ++ L
Sbjct: 527 FKFVDE-FPMTVTGKIQKFRMREISIEEIRLL 557
>gi|384431644|ref|YP_005641004.1| long-chain-fatty-acid--CoA ligase [Thermus thermophilus
SG0.5JP17-16]
gi|333967112|gb|AEG33877.1| Long-chain-fatty-acid--CoA ligase [Thermus thermophilus
SG0.5JP17-16]
Length = 560
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 185/400 (46%), Gaps = 58/400 (14%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA-------IVGYGEDDVYLHT 112
H+ PE ++ +T GTTG KG +++H L+ L A +VG G V L
Sbjct: 200 HASDPEDLALLQYTGGTTGLSKGAMLTHKNLVANVLQIDAWDPTSKDLVGKG---VMLGA 256
Query: 113 APLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLI 171
P H+ G++ AM L G V +P+ E +EA+E+H VT VP +
Sbjct: 257 LPFFHVYGMTVAMNYGLFSGYKIVLLPRPEIGPIVEAIEKHRVTHFPGVPTLYVAFNNFP 316
Query: 172 RVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 231
++K + S++ L+G LP E+ K A+LI YG++E S +T +P
Sbjct: 317 GIEK--RNVKSIRICLSGAAPLPVEVAKR-FEELTGARLIEGYGLSEASP----VTHSNP 369
Query: 232 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGA 286
L G + S+ G P P VE KV + V G ++ +G
Sbjct: 370 VL----------GLIKKGSI--------GMPFPSVEAKVVDEEGKEVPMGEVGELIVKGP 411
Query: 287 HVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 346
+VM YW++ + + + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE
Sbjct: 412 NVMKGYWNR-PEETEKALKDGWLYTGDMAKMDEDGYFYIVDRKKDMIIAGGYNIYPREVE 470
Query: 347 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 406
VL QH + VVG+ + E V A + L+ ++ + D +
Sbjct: 471 EVLYQHEAVQEAAVVGVPDPYRGETVAAFLVLKPEYRGKVTEKD--------------IE 516
Query: 407 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
CR+ NL +K PR+ + +R+ P +S GKI R E+R E
Sbjct: 517 AFCRQ-NLAAYKVPRI-IQFRESLPKSSVGKILRRELREE 554
>gi|374365200|ref|ZP_09623293.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
gi|373103335|gb|EHP44363.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
Length = 573
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 203/444 (45%), Gaps = 53/444 (11%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 74
LQ +P+LRW + +G + + D L A + T + I FTS
Sbjct: 164 LQAARLPALRWVIRMGGERTPGMLNYDALLAHGTHALTGELDAITAQLDRYDPINIQFTS 223
Query: 75 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGAC 133
GTTG+PKG ++H ++ + + E D P H G+ A +A + GAC
Sbjct: 224 GTTGAPKGATLTHRNIVNNGRFIAMAMRFSEQDKLCIPVPFYHCFGMVLAVLACVSTGAC 283
Query: 134 HVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
VF + FE + + AV + T+L VP + +A L + +++ + G
Sbjct: 284 MVFPGEAFEPAATMAAVSEERCTALHGVPTMF--IAQLDHPDFSKYDFSTLRTGIMAGSP 341
Query: 193 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 252
P E MK + A++ AYGMTETS P +F + T + +
Sbjct: 342 CPIETMKRVIANMHMAEVTIAYGMTETS-------------------PVSFQSSTTDPLD 382
Query: 253 QPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD-QFLAKPSVSTG 305
+ + VG PH+E+K+ DG+ + G + TRG VM YWD + + ++ G
Sbjct: 383 K-RVTTVGLIQPHLEVKLV-DGTGEIVPVGEKGELCTRGYSVMQGYWDDEPRTREAIRDG 440
Query: 306 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 365
W+ TGD+ +ID+ G +VGR + GGENVYP E+E L +HP + + V G+ +
Sbjct: 441 --WMHTGDLATIDEEGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVQVFGVPD 498
Query: 366 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 425
+ E V A + L+ +E + +R CR++ + +K PR ++
Sbjct: 499 PKYGEEVCAWIVLKPGETATEDD----------------IRAFCRDQ-IAHYKIPR-YIR 540
Query: 426 WRKPFPLTSTGKIRRDEVRREVMS 449
+ P+T TGK+++ V RE M+
Sbjct: 541 FVDEMPMTITGKVQK-FVMRERMT 563
>gi|148683592|gb|EDL15539.1| mCG63314 [Mus musculus]
Length = 615
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 188/393 (47%), Gaps = 48/393 (12%)
Query: 70 ICFTSGTTGSPKGVVISH------SALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLS 122
I FTSGTTG+PKG +SH S LI Q L K+ E V L +PL H +G +
Sbjct: 260 IQFTSGTTGNPKGATLSHHNIVNNSMLIGQRL-KMPTKTAEELRVVL-PSPLYHCLGSVG 317
Query: 123 SAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
M +M GA + P F K ALEA+ + T L P + D+ + + D
Sbjct: 318 GTMVSMMHGATLLLSFPSFNGKKALEAISREKGTLLYGTPTMFVDILN----QPDFSSYD 373
Query: 182 --SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
S++ + G P EL++ N +L+ YG TE +S +TFM + TLE Q
Sbjct: 374 FTSIRGGVIAGSPAPPELIRAIINKMNMKELVVVYGTTE-NSPVTFMNFPEDTLE---QK 429
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAK 299
+ G + P++ Q V G+ L V G + RG VM YW +
Sbjct: 430 AGSVGRIMPHTKAQIVNVETGE---LTNLNV-------PGELYIRGYCVMQGYWGEPQKT 479
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ W TGDI S+D+ G +VGR I GGEN+YP E+E L+HP +
Sbjct: 480 FETVGQDKWYRTGDIASMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFLKHPQVQEAQ 539
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VVG+ + R+ E + AC+ L+ ++E ++ C+ K ++ FK
Sbjct: 540 VVGVKDKRMGEEICACIPLKSGETT----------------TAEEIKAFCKGK-ISHFKI 582
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
PR ++++ + +PLT +GKI++ ++R ++ HLK
Sbjct: 583 PR-YIVFVEGYPLTISGKIQKFKLREQMEQHLK 614
>gi|453075501|ref|ZP_21978287.1| AMP-binding domain protein [Rhodococcus triatomae BKS 15-14]
gi|452762927|gb|EME21214.1| AMP-binding domain protein [Rhodococcus triatomae BKS 15-14]
Length = 561
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 182/396 (45%), Gaps = 53/396 (13%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
S + + + I +TSGTTG PKG +SH ++ + Y E D P H G
Sbjct: 199 SLSADDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYTEADRVCIPVPFYHCFG 258
Query: 121 LSSA-MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTW 177
+ +A GA V P F+ K+ L+AV+ TSL VP + +A+LA + +
Sbjct: 259 MVMGNLACTSHGAAMVIPAPAFDPKATLDAVQAERCTSLYGVPTMFIAELA-----EPDF 313
Query: 178 KGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
+ D S++ + G P E+MK+ +++ YGMTETS ++ T D T++
Sbjct: 314 ENYDLSSLRTGIMAGSPCPVEVMKQVIERMGMSEVSICYGMTETSP-VSLQTRSDDTIDQ 372
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVM 289
+ VG+ PH+E+K+ + G + TRG VM
Sbjct: 373 -------------------RVSTVGRVGPHLEVKIVDPATGLTVPRGAAGELCTRGYSVM 413
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
L YW+ W+ TGDIG +D G V + GR + GGEN+YP E+E L
Sbjct: 414 LGYWNNPEKTAEAIDAARWMHTGDIGVMDADGYVAITGRIKDMVIRGGENIYPREIEEFL 473
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
HP I+ V+G+ + + E ++A VR+RE L ++ +R+ C
Sbjct: 474 YTHPDILDAQVIGVPDEKYGEELMAWVRMREG---------------AARLDADAVREFC 518
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
K L +K PR +V FP+T TGK+R+ E+R
Sbjct: 519 TGK-LARYKIPR-YVHVVDEFPMTVTGKVRKVEMRE 552
>gi|384440070|ref|YP_005654794.1| Long-chain fatty acid--CoA ligase [Thermus sp. CCB_US3_UF1]
gi|359291203|gb|AEV16720.1| Long-chain fatty acid--CoA ligase [Thermus sp. CCB_US3_UF1]
Length = 560
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 181/405 (44%), Gaps = 68/405 (16%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA-------IVGYGEDDVYLHT 112
H PE ++ +T GTTG KG +++H L+ L A ++G G V L
Sbjct: 200 HPSDPEDLALLQYTGGTTGISKGAMLTHRNLVANVLQIDAWDPTSRELLGKG---VMLGA 256
Query: 113 APLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLI 171
P H+ G++ AM L G V +P+ E K +EA+E+H VT VP +
Sbjct: 257 LPFFHVYGMTVAMNYGLFSGYKIVLLPRPEIKPIVEAIEKHGVTHFPGVPTLYVAFNNFP 316
Query: 172 RVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLY 229
++ GR+ S++ L+G LP E+ K A+LI YG++E S
Sbjct: 317 GIE----GRNVKSIRICLSGAAPLPVEVAKR-FEEITGARLIEGYGLSEAS--------- 362
Query: 230 DPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTR 284
P N V + +G P P VE KV + VG ++ +
Sbjct: 363 ----------PVTHSNPVEGVVKK---GSIGMPLPSVEAKVVDEEGKELPPGEVGELILK 409
Query: 285 GAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 341
G +VM YW+ +P S + WL TGD+ +D G ++V R+ I +GG N+Y
Sbjct: 410 GPNVMKGYWN----RPEESQKTLKDGWLFTGDLAKMDPDGYFYIVDRKKDMIIAGGYNIY 465
Query: 342 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLS 401
P EVE VL QHP + VVG+ + E V A + L+ ++ S D
Sbjct: 466 PREVEEVLYQHPAVQEAAVVGVPDPYRGETVAAFIVLKNEYKGKVSEKD----------- 514
Query: 402 SEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
+ CR+ NL +K PR+ + +R P +S GKI R E+R E
Sbjct: 515 ---IETFCRQ-NLAAYKVPRI-LQFRDTLPKSSVGKILRRELREE 554
>gi|302387340|ref|YP_003823162.1| AMP-dependent synthetase and ligase [Clostridium saccharolyticum
WM1]
gi|302197968|gb|ADL05539.1| AMP-dependent synthetase and ligase [Clostridium saccharolyticum
WM1]
Length = 527
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 182/390 (46%), Gaps = 49/390 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I FTSGT+G PKGV++SH L+ S + + + E D + PL H G+++ ++ +
Sbjct: 175 ILFTSGTSGVPKGVMLSHENLVNNSAEMVRSLHWNESDRMCLSVPLFHCFGITAGILSAV 234
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK-IL 187
GA ++S +E ++++ T L VP++ LA + +++ S+ I+
Sbjct: 235 HAGAAMYVNQYYKSIGVMENIQKNSCTILNGVPSMF--LAMVKNSRRSEYDLSSLNSGII 292
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G PSE + L +YG TE+S ++T DP
Sbjct: 293 AGSAIHPSEYIN-ICKELKMEHLQPSYGQTESSPAITMTGYRDPICR------------- 338
Query: 248 PNSVHQPQGVCVGKPAPHVELKV------CSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 301
+ + GK P+ EL++ C + VG I +RG H+M Y+++
Sbjct: 339 -------KALTAGKKIPYTELRIWDDERKCEAETGRVGEIQSRGYHIMKGYYNREKETER 391
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
V E WL TGD G +D+ G +++ GR+ I GGEN+ P E+E +L P I + VV
Sbjct: 392 VLDEEGWLHTGDCGYLDEDGCLYMTGRKKELIIRGGENIAPVEIENCILDLPEIKDVKVV 451
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+A L E + AC+ + ++SE E +R+ R+ NL +K P+
Sbjct: 452 GVAAQVLQEEIAACIIMEPGAEFSE----------------ERVREQVRQ-NLADYKVPK 494
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+V FP ++ GK+ E+R+EV L
Sbjct: 495 -YVCRFDSFPFSNNGKVIIHELRQEVEKRL 523
>gi|119505624|ref|ZP_01627695.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
gi|119458567|gb|EAW39671.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
Length = 520
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 181/380 (47%), Gaps = 40/380 (10%)
Query: 72 FTSGTTGSPKGVVISHSALI-VQSLAKIAIVG-YGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+TSGTTG PKG V+SH ++ + + IA G Y D + L APL HIGG A L
Sbjct: 164 YTSGTTGKPKGAVLSHRNILSLTQMMGIANDGAYNADTINLVVAPLFHIGGTGVAYIGLA 223
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GA ++ F+ +E ++ VTS+ VPA++ + L+ + + S++ I G
Sbjct: 224 YGAHNILHEAFDPLRVVETIQAQSVTSMFMVPAMIQAIVKLVPNVRDYD-FSSLENIAYG 282
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ + L+KEA F ++ YGMTETS ++ ++ D G +P+
Sbjct: 283 ASPISATLLKEALEVF-DSRFSQVYGMTETSGTVIALSPEDHDKAIAG---------SPH 332
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 309
+ C G V+ + G + G I R A ML Y+++ S +T E L
Sbjct: 333 LLTSCGKACPGNEVKIVDTEGVELGPNQTGEICLRSASNMLEYFNR-----SQATAETLL 387
Query: 310 D----TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 365
D TGD G+ID+ G ++L R + +GGENVYP EVE VL PG+I + V+GI +
Sbjct: 388 DGWVMTGDAGTIDEEGYIYLRDRLKDMVVTGGENVYPVEVENVLSGIPGVIEVAVIGIPD 447
Query: 366 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 425
E ++A L+ + ++ ++ + CR+K L GFK PR V
Sbjct: 448 ETYGEALLAIFALQPNH----------------MIDADDVIAFCRDK-LAGFKIPRR-VE 489
Query: 426 WRKPFPLTSTGKIRRDEVRR 445
P +GKI + +R
Sbjct: 490 CIPALPRNPSGKILKTTLRE 509
>gi|30261960|ref|NP_844337.1| acyl-CoA synthetase [Bacillus anthracis str. Ames]
gi|47527224|ref|YP_018573.1| acyl-CoA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49184801|ref|YP_028053.1| acyl-CoA synthetase [Bacillus anthracis str. Sterne]
gi|65319244|ref|ZP_00392203.1| COG0318: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[Bacillus anthracis str. A2012]
gi|165870247|ref|ZP_02214903.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0488]
gi|167633121|ref|ZP_02391447.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0442]
gi|167638350|ref|ZP_02396627.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0193]
gi|170686403|ref|ZP_02877624.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0465]
gi|170706090|ref|ZP_02896552.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0389]
gi|177650895|ref|ZP_02933792.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0174]
gi|190566506|ref|ZP_03019424.1| putative feruloyl-CoA synthetase [Bacillus anthracis str.
Tsiankovskii-I]
gi|227815251|ref|YP_002815260.1| acyl-CoA synthetase [Bacillus anthracis str. CDC 684]
gi|229600600|ref|YP_002866332.1| acyl-CoA synthetase [Bacillus anthracis str. A0248]
gi|254684524|ref|ZP_05148384.1| acyl-CoA synthetase [Bacillus anthracis str. CNEVA-9066]
gi|254734827|ref|ZP_05192539.1| acyl-CoA synthetase [Bacillus anthracis str. Western North America
USA6153]
gi|254741228|ref|ZP_05198916.1| acyl-CoA synthetase [Bacillus anthracis str. Kruger B]
gi|254755482|ref|ZP_05207516.1| acyl-CoA synthetase [Bacillus anthracis str. Vollum]
gi|254760018|ref|ZP_05212042.1| acyl-CoA synthetase [Bacillus anthracis str. Australia 94]
gi|386735699|ref|YP_006208880.1| feruloyl-CoA synthetase [Bacillus anthracis str. H9401]
gi|421510042|ref|ZP_15956941.1| acyl-CoA synthetase [Bacillus anthracis str. UR-1]
gi|421635754|ref|ZP_16076353.1| acyl-CoA synthetase [Bacillus anthracis str. BF1]
gi|30256586|gb|AAP25823.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. Ames]
gi|47502372|gb|AAT31048.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49178728|gb|AAT54104.1| feruloyl-CoA synthetase, putative [Bacillus anthracis str. Sterne]
gi|164714135|gb|EDR19656.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0488]
gi|167513651|gb|EDR89020.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0193]
gi|167531933|gb|EDR94598.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0442]
gi|170129092|gb|EDS97957.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0389]
gi|170669479|gb|EDT20221.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0465]
gi|172083356|gb|EDT68417.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0174]
gi|190562641|gb|EDV16608.1| putative feruloyl-CoA synthetase [Bacillus anthracis str.
Tsiankovskii-I]
gi|227004733|gb|ACP14476.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. CDC 684]
gi|229265008|gb|ACQ46645.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0248]
gi|384385551|gb|AFH83212.1| Feruloyl-CoA synthetase [Bacillus anthracis str. H9401]
gi|401819884|gb|EJT19055.1| acyl-CoA synthetase [Bacillus anthracis str. UR-1]
gi|403396282|gb|EJY93519.1| acyl-CoA synthetase [Bacillus anthracis str. BF1]
Length = 496
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 187/393 (47%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE AL +E+H VT ++ VP I L + + T SV+
Sbjct: 210 FPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP + ++ + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TEETIQDG--WLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG + + E+ +A + K+ +L+ +V+ +HCR L +
Sbjct: 422 VAVVGRQHVKWGEIPIAFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ +++ K P +TGKI++ ++ ++ S
Sbjct: 465 KIPKE-IVFLKELPKNATGKIQKAQLVNQLKSR 496
>gi|229121509|ref|ZP_04250736.1| Feruloyl-CoA synthetase [Bacillus cereus 95/8201]
gi|228661973|gb|EEL17586.1| Feruloyl-CoA synthetase [Bacillus cereus 95/8201]
Length = 496
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 187/393 (47%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE AL +E+H VT ++ VP I L + + T SV+
Sbjct: 210 FPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP + ++ + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TEETIQDG--WLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG + + E+ +A + K+ +L+ +V+ +HCR L +
Sbjct: 422 VAVVGRQHVKWGEIPIAFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ +++ K P +TGKI++ ++ ++ S
Sbjct: 465 KIPKE-IVFLKELPKNATGKIQKAQLVNQLKSR 496
>gi|116694665|ref|YP_728876.1| long-chain-fatty-acid--CoA ligase [Ralstonia eutropha H16]
gi|113529164|emb|CAJ95511.1| 4-Coumarate-CoA ligase [Ralstonia eutropha H16]
Length = 527
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 176/397 (44%), Gaps = 47/397 (11%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI----VQSLAKIAIVGYGEDDVYLHT 112
P H A ++ +TSGTTG PKG +++H L V + + DDV L
Sbjct: 157 PPAHQPAAHDVLLQLYTSGTTGRPKGAMLTHRNLTIGTEVSERENLLWSHWVADDVSLVA 216
Query: 113 APLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR 172
P+ HIGG + L+ GA V +F+ ++ L+ +E+ ++ L VPA M + R
Sbjct: 217 MPVAHIGGSGWGLRNLLSGAKGVVAREFDPRAVLDFIEKERISKLFLVPAAMQIVLRDPR 276
Query: 173 VKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT 232
++ R +K +L G +P+ L++E F + YGMTET+ ++ + D T
Sbjct: 277 ARQVDYSR--LKYLLYGAAPIPAALLREGIEVF-GCGFVQQYGMTETTGTIVALPPEDHT 333
Query: 233 LETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAH 287
E P+ GKP P VE+KV VG ++ R H
Sbjct: 334 TE-----------------EVPRMRAAGKPLPGVEIKVVDYEGRQLAPGEVGELVVRSQH 376
Query: 288 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 347
M YW Q E WL TGD G +D G +++ R I SGGENVYP EVE+
Sbjct: 377 NMAGYWKQPEETARTIDAEGWLRTGDAGYLDAEGYLYIHDRVKDMIISGGENVYPAEVES 436
Query: 348 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 407
+ HP + + VVG+ + + E V A V L+ ++ ++ +
Sbjct: 437 AIYGHPQVADVAVVGVPDEKWGEAVKAIVVLKPGQVPDQAGIIAWTRQR----------- 485
Query: 408 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
L GFK P+ + + + P +GK+ R ++R
Sbjct: 486 ------LAGFKVPK-SIEFVEALPRNPSGKLLRRKLR 515
>gi|399545625|ref|YP_006558933.1| acyl-CoA synthetase YngI [Marinobacter sp. BSs20148]
gi|399160957|gb|AFP31520.1| Putative acyl-CoA synthetase YngI [Marinobacter sp. BSs20148]
Length = 543
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 176/384 (45%), Gaps = 47/384 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I FTSGTTGSPKG ++H ++ E D + PL H G+ +
Sbjct: 189 IQFTSGTTGSPKGAALTHHNILNNGFFVGESQRLSEKDRLVIPVPLYHCFGMVMGNLGCV 248
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ P FE K+ L+AV Q T+L VP + +A L + +++ +
Sbjct: 249 THGSTMIYPGEGFEPKAVLQAVHQEKATALYGVPTMF--IAELADPEFEIYDLSTLRTGI 306
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P+E+M++ ++ AYGMTETS T + DP
Sbjct: 307 MAGSICPAEVMRKVNGKMNMKEVQIAYGMTETSPVSTQTSSQDP---------------- 350
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ Q VG+ PH+E K+ + ++ G + TRG VML+YW+
Sbjct: 351 ----FEKQVTTVGRTQPHLENKIVEPANGNIVARGTIGELCTRGYSVMLKYWNNDEKTRE 406
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ ++D+ G + +VGR + GGEN+YP+EVE L HP I + V
Sbjct: 407 TIDDAGWMHTGDLATMDEDGYIQIVGRIKDMVIRGGENIYPKEVEEFLYTHPSIEEVQVT 466
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI N + E +VA V+LR D S + + L++ C+ K + +K PR
Sbjct: 467 GIPNEKFGEELVAWVKLRP---------DADSVDADDLIA------FCKGK-IAHYKIPR 510
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRR 445
+ + + FP+T TGKI++ ++R
Sbjct: 511 NY-KFVEAFPMTVTGKIQKFKMRE 533
>gi|374607539|ref|ZP_09680340.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
gi|373555375|gb|EHP81945.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
Length = 1055
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 189/439 (43%), Gaps = 53/439 (12%)
Query: 21 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 80
P + V LGS + + R AD + +LRS AP + I +TSGTTGSP
Sbjct: 660 PDVSEVVFLGSEDWNRLRDR----ADQVSPAALRSR--MDGLAPGDPINIQYTSGTTGSP 713
Query: 81 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK- 139
KG +SH ++ ++ G + P H G+ + IP
Sbjct: 714 KGATLSHRNILNNGFFVTELIKLGPGERLCIPVPFYHCFGMVMGNLGCTTHGATMVIPAA 773
Query: 140 -FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 198
F+ LEA+E+ T+L VP + +A L K + S++ + G P ELM
Sbjct: 774 GFDPAVTLEAIEKERCTALYGVPTMF--IAMLGHPKLGQRDLSSLRTGIMAGATCPMELM 831
Query: 199 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 258
K + ++L AYGMTETS ++ TL D L+ +
Sbjct: 832 KRCVDELNMSELAIAYGMTETSP-VSCQTLIDDDLDR-------------------RTAT 871
Query: 259 VGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 312
VG+ PHVE+++ + G TRG VML YW+ + W+ TG
Sbjct: 872 VGRAHPHVEIRIVDPDTGKTVKRGEPGEFCTRGYSVMLGYWNDDDRTREAVDADGWMHTG 931
Query: 313 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 372
D+ + D G ++GR + GGENVYP EVE L HP I V+G+ + + E +
Sbjct: 932 DLAVMRDDGYCMVIGRIKDMVIRGGENVYPREVEEFLHTHPDIDDAQVIGVPDEKYGEEI 991
Query: 373 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 432
A +R+R + L ++ +R K L +K PR +V FP+
Sbjct: 992 CAWIRMR---------------SGRTPLDADAVRAFASGK-LAHYKIPR-YVRVVDEFPM 1034
Query: 433 TSTGKIRRDEVRREVMSHL 451
T TGK+R+ ++R E + L
Sbjct: 1035 TVTGKVRKVDMRTETVRLL 1053
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 192/442 (43%), Gaps = 62/442 (14%)
Query: 13 LELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 72
+E PS+ +++G + ++ D + D+ A E I +
Sbjct: 125 VEQARANAPSVDIVLTIGGDLDEIIDAADTVAVDV-------------DIADEAPAFIMY 171
Query: 73 TSGTTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAMLMVG 131
TSGTTG PKG V++H L + + + IA +GY +DD ++ APL H G+S + M + G
Sbjct: 172 TSGTTGFPKGAVLTHRNLYLHAYSSIATLGYRDDDDCWMAVAPLFHTAGVSGMLPMFLNG 231
Query: 132 ACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
V P F+ + ++ + VTS PA + L ++ R ++++ G
Sbjct: 232 GTAVIPPSGGFDPAAIVDTIVDEHVTSCWMTPAQWQTVCALPDLQSRDLSR--LRRVWWG 289
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ L++ ++F A++I+A+G TE S +T + + + G
Sbjct: 290 AAPASTALLRSMIDAFGHAEIIAAFGQTE-CSPITCLLRGEDAIRKIGS----------- 337
Query: 250 SVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
VG P +VE ++ D VG I+ G VM YW++
Sbjct: 338 ---------VGTPMLNVETRIVDDQMNDVAKGEVGEIVYLGPLVMKEYWEKEAETAEAFR 388
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
G W +GD+ D G +++V R+ I SGGEN+Y EVE L + + ++G+
Sbjct: 389 GG-WFHSGDLVRQDSDGYIYVVDRKKDMIISGGENIYCAEVENALATCAKVAEVAIIGVP 447
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ + E +A V R+ D + ++ + HCR+ +L +K PR
Sbjct: 448 DPKWGETPMAVVVPRDP-------ADPPTDDE--------IEAHCRQ-HLARYKHPRRLA 491
Query: 425 LWRKPFPLTSTGKIRRDEVRRE 446
+ P ++GK+ + +R+E
Sbjct: 492 IV-DALPRNASGKVLKTRLRQE 512
>gi|328718816|ref|XP_001945665.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Acyrthosiphon pisum]
Length = 595
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 181/404 (44%), Gaps = 50/404 (12%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSAL------IVQSLAKIAIVGYGEDDVYLHTAPLCH 117
P+ II FTSGTTG PK +++H L I++ L + G + + PL H
Sbjct: 228 PDEGCIIQFTSGTTGKPKAALLNHFGLMNNAYSIMKRLGIYDGISKGILHKFCNPMPLFH 287
Query: 118 IGGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK 175
GLS M+ V +P FE K+A++ + + T L P + D+ ++
Sbjct: 288 ASGLSIGALGPMITKSTVVLPSAHFEPKAAVDVLTKEKCTILFGTPTVFVDIMSVFENLS 347
Query: 176 TWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
+ +K L+GG LM + N FP+AK++S +GMTETS
Sbjct: 348 PTLQDNDLKFGLSGGATCSPILMTKFNNMFPRAKILSLFGMTETS--------------- 392
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVML 290
P +F + T +S + + +G HVE KV + V G +L RG VM
Sbjct: 393 ----PCSFQSFTDDSDERVKST-MGFIQDHVEAKVVDTNGNMVPFGTPGELLIRGYLVMN 447
Query: 291 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 350
Y++ WL TGD + + G VGR I GGEN++P+E+E L
Sbjct: 448 GYFNDEEKTKETIDSNGWLHTGDQFVLYEDGYGNHVGRLKEMIIRGGENLFPKEIEYFLE 507
Query: 351 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 410
HP I + V GI + R+ E V A V ++E +E++ SK K
Sbjct: 508 SHPSISQVQVYGIPDDRMGEEVCASVIVKEGAAVTEADIKAYSKGK-------------- 553
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
++ FK P+ + + FP+T+TGK++++ + M + SL
Sbjct: 554 ---ISHFKIPKYIFIEKDGFPMTATGKVQKNRLSEIAMQRISSL 594
>gi|218903081|ref|YP_002450915.1| acyl-CoA synthetase [Bacillus cereus AH820]
gi|218536223|gb|ACK88621.1| putative feruloyl-CoA synthetase [Bacillus cereus AH820]
Length = 496
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 187/393 (47%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE AL +E+H VT ++ VP I L + + T SV+
Sbjct: 210 FPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP + ++ + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TEETIQDG--WLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG + + E+ +A + K+ +L+ +V+ +HCR L +
Sbjct: 422 VAVVGRQHVKWGEIPIAFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ +++ K P +TGKI++ ++ ++ S
Sbjct: 465 KIPKE-IVFLKELPKNATGKIQKAQLVNQLKSR 496
>gi|134294240|ref|YP_001117975.1| AMP-binding domain-containing protein [Burkholderia vietnamiensis
G4]
gi|134137397|gb|ABO53140.1| AMP-dependent synthetase and ligase [Burkholderia vietnamiensis G4]
Length = 575
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 207/449 (46%), Gaps = 53/449 (11%)
Query: 14 ELQHTAIPSLRWHVSLGS-SSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVII 70
+L +PSLR VS+G + + D++ D L L ++ T A A+ I
Sbjct: 163 DLHAARVPSLRTVVSMGDVAPAGMFRFADVMARGRDTLDAARLDAIGAT--LAAGEAINI 220
Query: 71 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLM 129
FTSGTTGSPKG ++H ++ + + + + E D PL H G+ A +A +
Sbjct: 221 QFTSGTTGSPKGATLTHRNVVNNARSIAMAMRFTEQDALCIPVPLYHCFGMVLAVLACVS 280
Query: 130 VGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
GA VF + F+ + L AV T+L VP + +A L + +++ +
Sbjct: 281 TGAAMVFPGEAFDPVATLAAVADERCTALHGVPTMF--IAELDHPEFKTFDLSTLRTGIM 338
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G P E MK + +++ AYGMTETS P +F + T
Sbjct: 339 AGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSFQSSTD 379
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
+ + + + VG+ PH+E+K+ G V G + T+G VML YWD AK
Sbjct: 380 DPLEK-RTTTVGRIQPHLEVKIVDPGGDIVPVGATGELCTKGYSVMLGYWDDD-AKTREV 437
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I V G+
Sbjct: 438 LIDGWMHTGDLATLDGQGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGL 497
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+A+ E + A + LR Q ++ + +R C + + +K PR +
Sbjct: 498 PDAKYGEELCAWIVLRAGEQMTDDD----------------VRAFC-QGQIAHYKIPR-Y 539
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ + P+T TGK+++ +R ++ LK
Sbjct: 540 IRFVDELPMTVTGKVQKFVMRERMIEELK 568
>gi|385206541|ref|ZP_10033411.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
gi|385186432|gb|EIF35706.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
Length = 518
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 184/386 (47%), Gaps = 43/386 (11%)
Query: 66 GAVIIC--FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
GA + C +T GTTG PKGV+ +H + L +IA LH AP H+ GL
Sbjct: 157 GADLACIMYTGGTTGFPKGVMQTHLNIWSSCLMRIAESAPLPGSAVLHAAPFFHVAGLGR 216
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
A+ + G HV IP F++ L A+ + V+ + VP ++ + +T S+
Sbjct: 217 ALVQFIAGEAHVVIPAFDAGDVLRAIGEERVSDTLLVPTMIQAVLNHPDFART--DLSSL 274
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
K++ G +P L+ + P +L +YGMTE S+ + +P +A
Sbjct: 275 KRLTYGASPIPETLLDRLIEALPGIQLAHSYGMTEACPSI--------SANSPSNHDEAG 326
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLA 298
+ +++ +G+ P + +KV SDG VG I+ RG +VM YW +
Sbjct: 327 ---RKSGLYR----SIGRGLPGLMVKVVGSDGEEVPRGTVGEIVVRGPNVMAGYWRK-PE 378
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ + + E WL TGD +D G +++V R I SGGENVY EVE+V+ +HP +
Sbjct: 379 ETAQAVREGWLHTGDGAYMDAQGYLYIVDRIKDMIVSGGENVYSAEVESVIARHPAVAAC 438
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+GI + E V A V C + L+ E +R+HCR+ + G+K
Sbjct: 439 AVIGIPHDTWGEAVHAVV-----------VCKPGAT-----LAEEEIREHCRQV-IAGYK 481
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVR 444
P+ V +R+ PL+ GK+ + +R
Sbjct: 482 CPK-SVEFREQLPLSGAGKVLKRAIR 506
>gi|410697740|gb|AFV76808.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Thermus
oshimai JL-2]
Length = 548
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 184/386 (47%), Gaps = 54/386 (13%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGE-DDVYLHTAPLCHIGGLSSAMAM-L 128
+T GTTG KG +++H L +L A I + E ++V L P H+ G++ AM + L
Sbjct: 203 YTGGTTGVAKGAMLTHRNLASNALQVRAWIPDFREGEEVVLGAIPFFHVYGMTVAMNLAL 262
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKI 186
+ GA V +P+ E +EA+E+H VT VP + + +GR+ SV+
Sbjct: 263 LGGAKLVLLPRPEIGPIVEAIEKHKVTLFPGVPTLYVAFNNFPGI----EGRNLRSVRAC 318
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
++G LP E+ E AKL+ YG+TE S LY + G+
Sbjct: 319 ISGSAPLPLEVA-ERFEKLTGAKLVEGYGLTEASPVTHCNPLYG---------KRKLGS- 367
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPS 301
VG P P VE KV + VG ++ +G +VM YW++ + S
Sbjct: 368 ------------VGLPFPGVEAKVVDEEGKEVPFGEVGELIVKGPNVMKGYWNR-PDETS 414
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL QHP + VV
Sbjct: 415 RALKDGWLFTGDLARMDEEGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHPAVQEAAVV 474
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + E V A + L+ +Q + D L CRE NL +K PR
Sbjct: 475 GVPDPYRGETVAAFLVLKPEYQGKVTEKD--------------LEAFCRE-NLAAYKVPR 519
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREV 447
+ + +R+ P +S GK+ + E+ +EV
Sbjct: 520 I-IRFRESLPKSSVGKVLKRELTKEV 544
>gi|254819980|ref|ZP_05224981.1| feruloyl-CoA synthetase [Mycobacterium intracellulare ATCC 13950]
Length = 491
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 194/416 (46%), Gaps = 43/416 (10%)
Query: 42 MLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIV 101
++T+D + + P + P+ ++ FTSGTT PK V ++H+ L +
Sbjct: 108 VMTSDEFIETARSTEPVSVFADPDDVAVVLFTSGTTSRPKAVELTHNNLTSYVTGTVEFG 167
Query: 102 GYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 161
D L P HI G+ +A++ L G V++ +F+ + V VT+ VP
Sbjct: 168 SADPADAALVCVPPYHIAGVGAALSNLYAGRAIVYLRRFDPHEWVRLVRDERVTTATVVP 227
Query: 162 AIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 221
+++ + ++ ++ +++ GG + L++ A + P+ ++AYG+TETSS
Sbjct: 228 TMLSRIVAVL--EQQSAELPTLRNFAYGGSKVARPLVRRALDLLPQVGFVNAYGLTETSS 285
Query: 222 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSS 276
++ +T D L + +T VG+P P +E+++ ++ G
Sbjct: 286 TIAVLTPEDHRLAHEARDDAVARRLT----------SVGRPVPGIEVQIRAEDGTVLGPG 335
Query: 277 HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSG 336
G + RG V RY + SV + W T D+ +D+ G +++ GR + I G
Sbjct: 336 ETGELFVRGPQVSGRYTEIG----SVLDAQGWFATRDVAMLDEDGYLFIGGRSDDTIIRG 391
Query: 337 GENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 396
GEN+ P EVE VL++HP + +VVVG+ +A + +VA + ES+
Sbjct: 392 GENIAPSEVEDVLIEHPDVREVVVVGLDDAEWGQAIVAVI-------VPESDTAP----- 439
Query: 397 ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ E LR+ R K L G + P V +R P T TGK+ +RRE++ LK
Sbjct: 440 ----APEQLREFARSK-LRGSRTPDRIV-FRDELPTTPTGKV----LRREILEDLK 485
>gi|398952613|ref|ZP_10674888.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
gi|398154923|gb|EJM43383.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
Length = 518
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 182/383 (47%), Gaps = 47/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV+ SH L ++A+ A V D + LH AP+ H+ LS + + +
Sbjct: 163 IMYTGGTTGRPKGVMQSHMNLWTAAVARAADVPVPADALTLHIAPMFHLAALSRVILISL 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
+G +F+P F++ + +E+ +T ++ VP ++ A ++ + ++ + G
Sbjct: 223 LGLPSIFVPAFDALDVMRTIERERITDILIVPTMLQ--ALIMHPEFARHDLSCLRSLTYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ L++ A + P + YGMTE + P + G P+ N +
Sbjct: 281 ASPIAVPLLELALKALPNVEFTQGYGMTEAA----------PPISANG--PE---NHSAE 325
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVST 304
+ + G+P V +++ + + VG +L RG ++ML YW+ KP +
Sbjct: 326 GIANGRLRSAGRPGLGVTVRIVDEHDNEVPRGTVGEVLVRGPNIMLGYWN----KPEETA 381
Query: 305 GEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ W+ TGD +DD G +++V R I SGGENVY EVE+ + HP + V+
Sbjct: 382 QALRGGWMHTGDGAYMDDDGYIYIVDRFKDMIVSGGENVYSGEVESAISSHPAVAACAVI 441
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI + E V A + L+ D + ++ +HCR + + G+K P+
Sbjct: 442 GIPCVQWGEAVHAVIVLKP---------DHEAAGAAII-------EHCR-RQIAGYKTPK 484
Query: 422 LFVLWRKPFPLTSTGKIRRDEVR 444
V +R PL+ GK+ + ++R
Sbjct: 485 -SVEFRTALPLSGAGKVLKRDLR 506
>gi|228927023|ref|ZP_04090089.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228832758|gb|EEM78329.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 496
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 186/393 (47%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE AL +E+H VT ++ VP I L + + T SV+
Sbjct: 210 FPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP + ++ + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TEETIQDG--WLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG + E+ +A + K+ +L+ +V+ +HCR L +
Sbjct: 422 VAVVGRQRVKWGEIPIAFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ +++ K P +TGKI++ ++ ++ S
Sbjct: 465 KIPKE-IVFLKELPKNATGKIQKAQLVNQLKSR 496
>gi|56962365|ref|YP_174090.1| AMP-binding protein [Bacillus clausii KSM-K16]
gi|56908602|dbj|BAD63129.1| long-chain-fatty-acid--CoA ligase [Bacillus clausii KSM-K16]
Length = 545
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 190/390 (48%), Gaps = 49/390 (12%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSS 123
+ A+ + +TSGTTG PKGV+++H LI + A + + D P H G +
Sbjct: 189 DDAINMQYTSGTTGFPKGVMLTHRNLIHNASNIAACMELSQQDRLCIPVPFFHCFGCVLG 248
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDS 182
+A + V A V + +F + L V+ T+L VP + +A+L +R T+ S
Sbjct: 249 TLACVSVAATMVPVEEFHPEKVLHTVQAEKCTALHGVPTMFIAELN--LRTFDTYD-LSS 305
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + G P E+MK+ ++ AYG TE+S +T T D +LE
Sbjct: 306 LRTGIMAGSNCPVEVMKDVIEKMGITEITIAYGQTESSPVIT-QTRVDDSLER------- 357
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSSHV-----GRILTRGAHVMLRYWDQF 296
+ VG+ P+VE+K+ D V G +LTRG HVM Y+ Q
Sbjct: 358 ------------RTDTVGRALPNVEVKIVDPDTQEEVAAGVQGELLTRGYHVMKGYYKQP 405
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
V TG+ WL TGD+ +D+ G + GR I GGEN+YP E+E L HP I+
Sbjct: 406 EETAKVLTGDGWLHTGDLAIMDEDGYCKITGRLKDMIIRGGENIYPREIEEFLYTHPSIL 465
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ VVG+ + + E+V A +RL+ D S L++ ++ +C+ +
Sbjct: 466 DVQVVGLPDPKYGEIVSAWIRLK---------ADHS-------LTAAEVQDYCK-GQIAH 508
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
FK P++ V + FP+T++GK+++ ++R +
Sbjct: 509 FKIPQV-VEFVDHFPMTASGKVQKFKLREQ 537
>gi|254721282|ref|ZP_05183072.1| acyl-CoA synthetase [Bacillus anthracis str. A1055]
Length = 496
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 187/393 (47%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE AL +E+H VT ++ VP I L + + T SV+
Sbjct: 210 FPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP + ++ + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TEETIQDG--WLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG + + E+ +A + K+ +L+ +V+ +HCR L +
Sbjct: 422 VAVVGRQHVKWGEIPIAFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ +++ K P +TGKI++ ++ ++ S
Sbjct: 465 KIPKE-IVFLKELPKNATGKIQKAQLVNQLKSR 496
>gi|408528321|emb|CCK26495.1| Putative acyl-CoA synthetase YngI [Streptomyces davawensis JCM
4913]
Length = 529
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 134/432 (31%), Positives = 186/432 (43%), Gaps = 59/432 (13%)
Query: 21 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 80
P LR V GS S D + R + A LP S + V I +TSGTTG P
Sbjct: 144 PDLREAVYFGSPSWDALLARAVPAA----------LPDDLSC--DDPVNIQYTSGTTGFP 191
Query: 81 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IP 138
KG +SH ++ ++ Y E D P H G+ +A GAC V P
Sbjct: 192 KGATLSHHNILNNGYFVGELIAYTEQDRVCLPVPFYHCFGMVMGNLAATSHGACIVIPAP 251
Query: 139 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 198
FE K+ LEAV+Q TSL VP + +A L S++ + G P E+M
Sbjct: 252 SFEPKATLEAVQQERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGIMAGSPCPVEVM 309
Query: 199 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 258
K + ++ YGMTETS T T D LE H+
Sbjct: 310 KRVVSEMNMTEVSICYGMTETSPVST-QTRRDDDLE-----------------HRTG--T 349
Query: 259 VGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 312
VG+ PHVE+K+ + G + TRG VML YW++ W+ TG
Sbjct: 350 VGRVLPHVEVKIVDPATGVTQPRGTAGELCTRGYSVMLGYWNEPERTDEAVDPARWMHTG 409
Query: 313 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 372
D+ + + G V +VGR I GGEN+YP E+E L HP I + V+G+ + R E V
Sbjct: 410 DLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADVQVIGVPHERYGEEV 469
Query: 373 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 432
+ACV R+ + E +R C E L +K P + FP+
Sbjct: 470 LACVIPRDPADPP---------------TLEDVRAFC-EGQLAHYKVPAGVRVLDN-FPM 512
Query: 433 TSTGKIRRDEVR 444
T +GK+R+ E+R
Sbjct: 513 TVSGKVRKIELR 524
>gi|299067998|emb|CBJ39212.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum CMR15]
Length = 571
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 214/448 (47%), Gaps = 54/448 (12%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICFT 73
LQ +P+LRW + +G ++ + + D + A +G +L + +P+ A+ I FT
Sbjct: 161 LQAAKLPALRWVIRMGEGATPGMIRFDEVMAR-GQGVPAGTLDAIAAALSPDDAINIQFT 219
Query: 74 SGTTGSPKGVVISHSALIVQS-LAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVG 131
SGTTG+PKG ++H ++ + +A+ G D + + PL H G+ S +A G
Sbjct: 220 SGTTGAPKGATLTHVNIVNNARFVAMAMNLQGTDRLCV-PVPLYHCFGMVMSVLACAATG 278
Query: 132 ACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
AC VF + F+ + L V + T+L VP + +A L + S++ + G
Sbjct: 279 ACMVFPGEAFDPLATLRTVAEERCTALHGVPTMF--IAQLDHPEFRSFDVSSLRGGIMAG 336
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P E+MK ++ AYGMTETS P +F + +
Sbjct: 337 SPCPIEVMKRVLAEMHLREVTIAYGMTETS-------------------PVSFQSAVTDP 377
Query: 251 VHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVST 304
+ + + VG+ PH+++K+ DG+ V G + T+G VML YWD AK + S
Sbjct: 378 LDK-RVTTVGRVQPHLQVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD-EAKTAESI 434
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
+ W+ TGD+ + D G +VGR + GGENVYP E+E L +HP + + V G+
Sbjct: 435 LDGWMRTGDLATFDADGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVP 494
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ + E V A + L+ Q ++ E +R+ C + + +K PR ++
Sbjct: 495 DPKYGEEVCAWIVLKPGQQATQ----------------EEIREFC-QGQIAHYKIPR-YI 536
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ P+T TGK+++ +R ++ L+
Sbjct: 537 RFVTEMPMTVTGKVQKFVMRERMIEELR 564
>gi|149185931|ref|ZP_01864246.1| acyl-CoA synthase [Erythrobacter sp. SD-21]
gi|148830492|gb|EDL48928.1| acyl-CoA synthase [Erythrobacter sp. SD-21]
Length = 516
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 179/391 (45%), Gaps = 50/391 (12%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAK----IAIVGYGEDDVYLHTAPLCHIG 119
P+ AV+ +TSGTTG+PKG V+++ L + + ED+ L P HIG
Sbjct: 154 PDDAVLQLYTSGTTGNPKGAVLTNRNLFALRVPSEEEGQPWSHFDEDEAILVCMPCAHIG 213
Query: 120 GLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
G + + G + +F L+ EQ +T L VPA + + R K T
Sbjct: 214 GTGLGIMAMSSGIRAIVQEEFTPDGVLDGFEQG-ITRLFIVPAALQMVVQHPRAKTT--D 270
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
++K +L G +P +L++EA + P A + YGMTET+ ++ + D L+
Sbjct: 271 MSAIKYVLYGAAPIPLDLLREAVKTIPDAGFLQCYGMTETTGTIAALPPEDHDLD----- 325
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWD 294
GN S GK P VELKV + + VG ++ R M YW+
Sbjct: 326 ----GNQRMKSA--------GKAVPGVELKVIGEDDAELPRGEVGELICRSPSNMAGYWN 373
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
A S S + W+ TGD +D+ G V++ R I SGGENVYP +VE+ + HP
Sbjct: 374 LPEATES-SLVDGWMHTGDAAYMDEDGYVYIQDRMKDMIISGGENVYPAQVESAIYGHPQ 432
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
I + V+G+ + E V AC+ L+ + E++ +K + L
Sbjct: 433 IAEVAVIGVPDETWGETVKACIVLKPGEELDEASVIAWTKER-----------------L 475
Query: 415 TGFKAPR-LFVLWRKPFPLTSTGKIRRDEVR 444
GFK PR + VL P ++GKI R ++R
Sbjct: 476 AGFKVPRSIDVL--DVMPRNASGKILRKDLR 504
>gi|73537400|ref|YP_297767.1| long-chain-fatty-acid--CoA ligase [Ralstonia eutropha JMP134]
gi|72120737|gb|AAZ62923.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 526
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 174/386 (45%), Gaps = 47/386 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALI----VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
V+ +TSGTTG PKG +++H L V I + DD+ L P+ HIGG
Sbjct: 167 VLQLYTSGTTGRPKGAMLTHRNLTIGTEVSERESIPWSHWTADDISLVAMPVAHIGGSGW 226
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
+ L+ GA V +F+ ++ L+ +E ++ L VPA M + R + R +
Sbjct: 227 GLRNLLSGAKGVVAREFDPRAVLDFIEYERISKLFMVPAAMQIVLRDPRARSVDYSR--L 284
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
K +L G +P+ L++E F + YGMTET+ ++ + D T E
Sbjct: 285 KYLLYGAAPIPAALLREGIEVF-GCGFVQQYGMTETTGTVVALPPEDHTTE--------- 334
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLA 298
P+ GKP P VELKV VG ++ R AH M YW Q
Sbjct: 335 --------EVPRMRAAGKPLPGVELKVVDYEGRELAPGEVGEVVVRSAHNMSGYWKQPEE 386
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ WL TGD G +D G +++ R I SGGENVYP EVE+ + HP + +
Sbjct: 387 TARTIDADGWLRTGDAGYLDAEGYLYIHDRVKDMIISGGENVYPAEVESAIYGHPIVADV 446
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+G+ + + E V A V L+ Q++ + ++ + + L GFK
Sbjct: 447 AVIGVPDEKWGEAVKAIVVLK---------AGQAADRESIVAWT--------RQRLAGFK 489
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVR 444
P+ + + P +GK+ R ++R
Sbjct: 490 VPK-SIDFVDALPRNPSGKLLRRKLR 514
>gi|196036763|ref|ZP_03104154.1| putative feruloyl-CoA synthetase [Bacillus cereus W]
gi|228945573|ref|ZP_04107923.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|195990646|gb|EDX54623.1| putative feruloyl-CoA synthetase [Bacillus cereus W]
gi|228814091|gb|EEM60362.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
Length = 496
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 187/393 (47%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE AL +E+H VT ++ VP I L + + T SV+
Sbjct: 210 FPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP + ++ + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TEETIQDG--WLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG + + E+ +A + K+ +L+ +V+ +HCR L +
Sbjct: 422 VAVVGRQHVKWGEIPIAFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ +++ K P +TGKI++ ++ ++ S
Sbjct: 465 KIPKE-IVFLKELPKNATGKIQKAQLVNQLKSR 496
>gi|443673957|ref|ZP_21139000.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
gi|443413383|emb|CCQ17339.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
Length = 538
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 175/394 (44%), Gaps = 59/394 (14%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL--- 121
+ A+ I +TSGTTG PKG +SH ++ + Y +D P H G+
Sbjct: 183 DDAINIQYTSGTTGFPKGATLSHRNILNNGFFVGELCHYTAEDRVCIPVPFYHCFGMVMG 242
Query: 122 -----SSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
S AM++ G P F+ + L AV TSL VP + L +
Sbjct: 243 NLACTSHGAAMVIPG------PSFDPVATLTAVASEKCTSLYGVPTMFIAELALENFGEF 296
Query: 177 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
G S++ + G P+E+MK+ + ++ YGMTETS
Sbjct: 297 DLG--SLRTGIMAGSPCPTEVMKQVIDRMGMTEVSICYGMTETS---------------- 338
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVML 290
P + + +S+ Q + VG+ PH+E+K+ H G + TRG VML
Sbjct: 339 ---PVSLQTRSDDSIEQ-RVSTVGRVGPHLEVKIVDPVLGHTVPRGDAGELCTRGYSVML 394
Query: 291 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 350
YW+Q E W+ TGDIG +D+ G V + GR + GGENVYP EVE L
Sbjct: 395 GYWEQPEKTAEAIDDERWMHTGDIGVMDEDGYVAITGRIKDMVIRGGENVYPREVEEFLY 454
Query: 351 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 410
HP I+ V+G+ +A+ E ++ +R+R+ L S +R C
Sbjct: 455 THPDILDAQVIGVPDAKYGEELMVWIRMRDV---------------AAPLDSAAVRAFC- 498
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+ L +K PR +V FP+T TGK+R+ E+R
Sbjct: 499 DGRLAHYKIPR-YVHVVDEFPMTVTGKVRKVEMR 531
>gi|226187518|dbj|BAH35622.1| probable fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
Length = 510
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 189/389 (48%), Gaps = 60/389 (15%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYG-EDDVYLHTAPLCHIGGLSSAMAM 127
++ +T GTTG PKGV++SH +LI +L +A V L PL HI G+ +A
Sbjct: 162 LLLYTGGTTGVPKGVMVSHRSLITSALGTLAAGNVAVSGGVNLAVNPLFHIAGIVGWLAQ 221
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK-GRDSVKKI 186
++G VF+ +F LEAV++H T++ VP + L LI + T SV+ +
Sbjct: 222 SLMGGTQVFLSRFSPGIFLEAVDRHRPTTVGLVPTM---LQMLISHEDTASYDLTSVRVL 278
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT--LETPGQLPQAFG 244
G + L+ + FP + YGMTET+ +++ P+ LE G+L ++ G
Sbjct: 279 RYGASPISPTLLGQVMQMFPNSAFAQGYGMTETA----HISVLSPSDHLEG-GELLRSAG 333
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAK 299
+ P H E+++ + VG I+T G+H+ML YW+ K
Sbjct: 334 RILP----------------HCEVRIVDPAGTELPPGEVGEIVTFGSHIMLGYWN----K 373
Query: 300 PSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
P + T EV W+ TGD G +D+ G +++V R I +GGENVY EVE L +H +
Sbjct: 374 P-IETAEVLRDGWMHTGDAGYLDERGYLFIVDRIKDMIVTGGENVYSTEVENALARHESV 432
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
V+G+ +++ E V A V LR ++SN D + LR H + +
Sbjct: 433 AACSVIGLPDSQWGERVHAVVVLR-----ADSNVD-----------VDALRAHVKTL-IA 475
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
G+K PR F + P+ GK+ + ++R
Sbjct: 476 GYKVPRSF-QFVDALPVNGAGKVLKRDLR 503
>gi|377574176|ref|ZP_09803207.1| long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC
104925]
gi|377536979|dbj|GAB48372.1| long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC
104925]
Length = 508
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 171/379 (45%), Gaps = 49/379 (12%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
++ +TSGTTG PKG +++H L+V + +V G DDV L PL H G + + +
Sbjct: 158 VLLYTSGTTGEPKGAMLTHDNLVVNAEVDRDLVDMGPDDVVLGALPLFHAFGQTCCLNLP 217
Query: 129 MVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
++ HV + P F + L +V + +T + VPA+ L + +++ +
Sbjct: 218 LLAGSHVVLHPVFNPRHTLASVGEKGITVFLAVPAMYTALLHFLARSPEDYDLSTLRMTI 277
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
+ G L EL+ F ++ YG++ETS + T G
Sbjct: 278 SSGAPLAVELLHRVEERF-GVLVLEGYGLSETSPTATL---------------NVEGRCR 321
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPS 301
P +V G P P VE++V + VG + RG +VM YW+ A +
Sbjct: 322 PGTV--------GTPLPGVEVRVVDQETGEPVEIGAVGEVAIRGHNVMRGYWNAPEATAA 373
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
V + + WL TGD+G++DD G + +V R+ + GGENVYP EVE V HP + V+
Sbjct: 374 VLSPDGWLRTGDLGTLDDDGFLTIVDRKKDLVIVGGENVYPREVEEVFYAHPAVAECAVL 433
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + E+V A V L E E+ LR H R +L+G K PR
Sbjct: 434 GVPDPVRGEVVGAAVVLAEGADADEAE----------------LRAHVR-AHLSGAKVPR 476
Query: 422 LFVLWRKPFPLTSTGKIRR 440
V + + P T KI +
Sbjct: 477 -HVWFVEGLPKGGTNKILK 494
>gi|268558570|ref|XP_002637276.1| Hypothetical protein CBG18959 [Caenorhabditis briggsae]
Length = 624
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 184/405 (45%), Gaps = 47/405 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA-PLCHIGG-- 120
P+ A+ I +TSGTTG PKG ++H ++ + GY E + PL H G
Sbjct: 253 PDDALNIQYTSGTTGQPKGATLTHHNVLNNAFFVGLRAGYSEKKTIICIPNPLYHCFGCV 312
Query: 121 LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ A+ + C P F++ +AL+A+ + T+L P + D+ + T
Sbjct: 313 MGVLAALTHLQTCVFPAPSFDALAALKAIHEEKCTALYGTPTMFIDMIN--HPEYTKYNY 370
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
DS++ G P L + + YG TETS ++FM+ D + P Q
Sbjct: 371 DSIRSGFIAGAPCPITLCRRLVQDMHMTDMQVCYGTTETSP-VSFMSTRD---DPPEQRI 426
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKP 300
++ G++ + A V+ + C G ++ RG VM YW+
Sbjct: 427 KSVGHIMDHL-----------EAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTK 475
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
T + W TGDI + D G + +VGR I GGEN+YP EVE L +H + + +
Sbjct: 476 KEITQDRWYHTGDIAVMHDNGTISIVGRSKDMIVRGGENIYPTEVEQFLFKHQAVEDVHI 535
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VG+ + R E+V A VRL ES E + E ++ C+ K + FK P
Sbjct: 536 VGVPDERFGEVVCAWVRLHES--------------AEGKTTEEDIKAWCKGK-IAHFKIP 580
Query: 421 RLFVLWRKP--FPLTSTGKIRRDEVR---------REVMSHLKSL 454
R ++L++K FPLT TGK+++ E+R ++V+SH L
Sbjct: 581 R-YILFKKEHQFPLTVTGKVKKFEIREMSKIELGLQQVVSHFSEL 624
>gi|418050096|ref|ZP_12688183.1| o-succinylbenzoate--CoA ligase [Mycobacterium rhodesiae JS60]
gi|353191001|gb|EHB56511.1| o-succinylbenzoate--CoA ligase [Mycobacterium rhodesiae JS60]
Length = 540
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 212/470 (45%), Gaps = 63/470 (13%)
Query: 9 DSWYLELQHTAIPSLRWHVSL-GSSSSDFVNK--------RDMLTADILKGYSLRSLPFT 59
D L+H+ L + S+ G SD V + R + D++ +S +
Sbjct: 110 DELRYTLRHSDTAMLIYAPSIHGRDLSDVVRRVVAQCPTVRRVYALDVVWSWSEGEIHDE 169
Query: 60 HSWA---PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI--VGYGEDDVYLHTAP 114
H W P G ++ +TSGTTG KGV++SH A++ ++A+IA+ G V L P
Sbjct: 170 HDWPTVDPSGPAMLQYTSGTTGPQKGVLLSHRAVV--NVARIAMQTCGVQPGSVCLSPFP 227
Query: 115 LCHIGG-LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV 173
H G ++S + L VG V + ++++ AL + + VT+ + VPA++ DL ++
Sbjct: 228 QFHTAGCVTSTLGALGVGGTLVIMERWDASEALALIRREGVTTALLVPAMLDDL---VQA 284
Query: 174 KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 233
+ G SV IL G +P+EL++ A + F + + YG TE S+ LT D
Sbjct: 285 ARRASGSYSVPTILAGASTVPAELIRTAQDVF-GGSVFNVYGQTEVSAPLTATRRGDSAD 343
Query: 234 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAH 287
+ +G+P P VE ++ + +G I RG
Sbjct: 344 DIAN--------------------TIGRPLPQVECRIADPRTGRTVDVGVIGEICARGYQ 383
Query: 288 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 347
ML Y+ A + W+ TGD+G++++ G + + GR I GGEN+ P EV
Sbjct: 384 QMLGYYRDPDATAGTVDADGWVHTGDLGTMNERGYLTITGRLKELIIRGGENISPTEVSQ 443
Query: 348 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 407
LL H + + VVG+ + RL E+V A V + DQ + + L
Sbjct: 444 CLLDHDSVQNVAVVGLPDDRLGELVAAVV-------VAGDGADQRALAAK-------LHD 489
Query: 408 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 457
HC + L +K P+ + + LT++GK+R +R+ ++ + S P
Sbjct: 490 HCAAR-LARYKIPQQW-FFTDELALTASGKVRSLVIRQMILDGVISSPQK 537
>gi|386360063|ref|YP_006058308.1| acyl-CoA synthetase [Thermus thermophilus JL-18]
gi|383509090|gb|AFH38522.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Thermus
thermophilus JL-18]
Length = 548
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 190/386 (49%), Gaps = 50/386 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGE-DDVYLHTAPLCHIGGLSSAMAM-L 128
+T GTTG KG +++H L +L A I + E ++V L P H+ G++ AM + L
Sbjct: 203 YTGGTTGLAKGAMLTHKNLSANALQVRAWIPDFKEGEEVVLGAIPFFHVYGMTVAMNLAL 262
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ GA V +P+ E K+ +EA+E+H VT VP + +++ + SV+ ++
Sbjct: 263 LGGAKLVLLPRPEIKAIVEAIEKHRVTLFPGVPTLYVAFNNFPGIER--RDLKSVRACIS 320
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G LP E+ E + AKL+ YG+TE S +T +P T + G+
Sbjct: 321 GSAPLPLEVA-ERFMALTGAKLVEGYGLTEASP----VTHCNPLYGT-----RKLGS--- 367
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVS 303
VG P P VE KV + VG ++ +G +VM YW++ + +
Sbjct: 368 ----------VGLPFPGVEAKVVDEEGKEVPIGEVGELVVKGPNVMKGYWNR-PEETEKA 416
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL QH + VVG+
Sbjct: 417 LKDGWLYTGDMAKMDEDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQEAAVVGV 476
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ E V A + L+E ++ + D + CR+ NL +K PR+
Sbjct: 477 PDPYRGETVAAFLVLKEEYRGKVTEKD--------------IEAFCRQ-NLAAYKVPRI- 520
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMS 449
+ +R+ P +S GKI + E+++EV +
Sbjct: 521 IQFRESLPKSSVGKILKRELQKEVAA 546
>gi|225863891|ref|YP_002749269.1| putative feruloyl-CoA synthetase [Bacillus cereus 03BB102]
gi|229184166|ref|ZP_04311375.1| Feruloyl-CoA synthetase [Bacillus cereus BGSC 6E1]
gi|376265823|ref|YP_005118535.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus F837/76]
gi|225789846|gb|ACO30063.1| putative feruloyl-CoA synthetase [Bacillus cereus 03BB102]
gi|228599281|gb|EEK56892.1| Feruloyl-CoA synthetase [Bacillus cereus BGSC 6E1]
gi|364511623|gb|AEW55022.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus F837/76]
Length = 496
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 187/393 (47%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTIHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE AL +E+H VT ++ VP I L + + T SV+
Sbjct: 210 FPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP + ++ + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TEETIQDG--WLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG + + E+ +A + K+ +L+ +V+ +HCR L +
Sbjct: 422 VAVVGRQHVKWGEIPIAFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ +++ K P +TGKI++ ++ ++ S
Sbjct: 465 KIPKE-IVFLKELPKNATGKIQKAQLVNQLKSR 496
>gi|269963119|ref|ZP_06177454.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832083|gb|EEZ86207.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 521
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 191/383 (49%), Gaps = 50/383 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG +SH+ ++ +++ ++ D + T PL H G + M A
Sbjct: 168 VILYTSGTTGQPKGAELSHTNMLTNAMSSQYLMRLEYSDTTMATLPLFHSFGQTVMMNAS 227
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
++ G+ V IP+FE K +E + QH V+ VP + +A L +++ + + VK L
Sbjct: 228 VLTGSTMVLIPRFEPKFVIEQIIQHKVSVFAGVPTMY--IALLRAGEQSPEHSELVKHSL 285
Query: 188 ----NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+GG +P E++++ + F + ++ YG++ET+ TF +
Sbjct: 286 RLGVSGGASMPVEVIRQFEHRF-ELPVLEGYGLSETAPVATFNHID-------------- 330
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 303
G+ P SV QP V K A ++K + +G + + VM Y+ +P +
Sbjct: 331 GDRLPGSVGQPLCGYVIKIA---DVKGHARAIGELGEVCIKSPSVMKGYY----GRPEAT 383
Query: 304 TGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+ W TGDIG +D+ GN+++V R I GG NVYP E+E VL+ HP + + V
Sbjct: 384 RDALRDGWFLTGDIGRVDEHGNLFIVDRVKDMIIRGGYNVYPREIEEVLMCHPDVEMVAV 443
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VG + RL E V A V L + +++C S + L CRE+ L +K P
Sbjct: 444 VGEHDDRLGEEVHAHVVLHQ-----DAHC-----------SPDTLIAWCREQ-LADYKYP 486
Query: 421 RLFVLWRKPFPLTSTGKIRRDEV 443
R V RK P+T+TGKI + E+
Sbjct: 487 RR-VFIRKALPMTATGKILKREL 508
>gi|407274853|ref|ZP_11103323.1| AMP-binding domain protein [Rhodococcus sp. P14]
Length = 552
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 175/386 (45%), Gaps = 53/386 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E D P H G+ +A
Sbjct: 196 IQYTSGTTGFPKGATLSHHNILNNGFFVGELCHYTEQDKVCIPVPFYHCFGMVMGNLACT 255
Query: 129 MVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVK 184
GA V P F+ L AV + TSL VP + +A+LA + G D S++
Sbjct: 256 SHGATMVIPGPAFDPAQTLAAVAEERCTSLYGVPTMFIAELA-----DPGFDGFDLSSLR 310
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E+MK+ A++ YGMTETS ++ T D T++
Sbjct: 311 TGIMAGSPCPVEVMKQVIERMGMAEVSICYGMTETSP-VSLQTRSDDTIDQ--------- 360
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLA 298
+ VG+ PH+E+K+ + G + TRG VML YW+Q
Sbjct: 361 ----------RVSTVGRVGPHLEVKIVDPATGLTVPRGEPGELCTRGYSVMLGYWNQPDK 410
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
W+ TGDIG +D G V + GR + GGEN+YP E+E L HP I+
Sbjct: 411 TADAIDAARWMHTGDIGVMDADGYVSVTGRIKDMVIRGGENIYPREIEEFLYTHPDILDA 470
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG+ + + E ++ +R+RE L ++ LR++C K L +K
Sbjct: 471 QVVGVPDQKYGEELMVWIRMREG---------------AAPLDAQSLREYCTGK-LAHYK 514
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVR 444
PR +V FP+T TGKIR+ E+R
Sbjct: 515 IPR-YVHVVDEFPMTVTGKIRKVEMR 539
>gi|284989388|ref|YP_003407942.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
gi|284062633|gb|ADB73571.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
Length = 551
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 169/383 (44%), Gaps = 47/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG ++H L+ GY E D P H G+ +A
Sbjct: 190 IQYTSGTTGFPKGATLTHHNLLNNGFFVGEGCGYTEADRICIPVPYYHCFGMGMGNLAAT 249
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA V P F+ + L AV+ TSL VP + +A L S++ +
Sbjct: 250 SHGATMVIPAPGFDPAATLRAVQDERCTSLYGVPTMF--IAELALPDFGTYDLSSLRTGI 307
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK + ++ YGMTETS T T D L+
Sbjct: 308 MAGSPCPVEVMKRVVSEMGMTEVTICYGMTETSPVST-QTGADDDLDR------------ 354
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ VG+ PH+E+KV + G TRG VML YWD+
Sbjct: 355 -------RTSTVGRVHPHLEVKVIDPETGLTVPRGTPGEFCTRGYSVMLGYWDEPEKTAE 407
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
V W+ TGD+ +D G + +VGR + GGENVYP EVE L HP ++ V+
Sbjct: 408 VIDAARWMHTGDLAVMDAEGYLNIVGRIKDMVIRGGENVYPREVEEFLYTHPDVVDAQVI 467
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + R E ++A VRLRE + L+ E LRQ C + L +K PR
Sbjct: 468 GVPDERFGEELMAWVRLREGAE---------------PLTPEALRQFCSGR-LAHYKIPR 511
Query: 422 LFVLWRKPFPLTSTGKIRRDEVR 444
+V FP+T TGK+R+ E+R
Sbjct: 512 -YVKIVDGFPMTVTGKVRKVEMR 533
>gi|432331437|ref|YP_007249580.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Methanoregula
formicicum SMSP]
gi|432138146|gb|AGB03073.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Methanoregula
formicicum SMSP]
Length = 566
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 204/443 (46%), Gaps = 64/443 (14%)
Query: 20 IPSLRWHVSLGS-------SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 72
P L+ + LG + DF+ K + ++ D LK L F + + I +
Sbjct: 156 FPFLKHAIFLGDIPYNGMFTWGDFLKKSEEISVDELKERG-EGLTF------DDPINIQY 208
Query: 73 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVG 131
TSGTTG PKGVV++H ++ +G+ + D P H G+ S +A + G
Sbjct: 209 TSGTTGFPKGVVLTHHNVLNNGYIIGEGMGFSDKDRLCIPVPFYHCFGMVLSNLACVTHG 268
Query: 132 ACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKILNG 189
+ V P F+++ L+ VE+ T+L VP + +A+LA K + S++ +
Sbjct: 269 STMVLPAPTFDAEEVLKTVEKEHCTALHGVPTMFIAELAHPNFAKYDLR---SLRTGIMA 325
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P E+MKE ++++ YG TET+ +T T DP
Sbjct: 326 GSPCPIEVMKEVNTRMNMSEIVIVYGQTETAPGVTMTTTKDPL----------------- 368
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 303
+ VG+ PH ELK+ + + G I RG VM Y++ A +
Sbjct: 369 ---DRRVTTVGRAFPHTELKIIDPNTGKIVPTGAIGEICARGYCVMKCYYNNPAATHATL 425
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W TGD+G++DD G +VGR + GGEN+YP E+E L H I + + G+
Sbjct: 426 DKDRWNHTGDLGTMDDEGYFKIVGRLKDMVIRGGENIYPREIEEFLHHHEKISDVYITGV 485
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E + A V+L+ + ++ + ++ +C+ K + +K PR +
Sbjct: 486 PDVKYGEELCAWVKLKPG----------------VTMTEQEVKDYCKGK-IARYKIPR-Y 527
Query: 424 VLWRKPFPLTSTGKIRRDEVRRE 446
VL+ + FP+T +GKI++ ++R E
Sbjct: 528 VLFVQEFPITISGKIQKFKMREE 550
>gi|389574151|ref|ZP_10164220.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. M 2-6]
gi|388426340|gb|EIL84156.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. M 2-6]
Length = 545
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 195/447 (43%), Gaps = 47/447 (10%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
E+ T P L+ + +G + + D L + L + P+ + + +T
Sbjct: 139 EITSTQFPYLKRCIYIGQHVPNGMLSWDRLQVAAKRTEELEWEKRMNELTPDDVINMQYT 198
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGA 132
SGTTG PKGV++SH+ ++ + + E D P H G + +A L G
Sbjct: 199 SGTTGYPKGVMLSHTNIVCNASQIADCMKLTEQDRMCIPVPFFHCFGSVLGVLACLTKGG 258
Query: 133 CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
+ + F + L+ VE+ T L VP + +A L +++ + G
Sbjct: 259 TIIPLESFHPERVLQTVEKEKCTVLHGVPTMF--IAELDHPNFHSYDLSTLRTGIMAGSL 316
Query: 193 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 252
PS +MK +L AYG TE+S +T T D + E Q
Sbjct: 317 CPSHVMKAVIEKMGLKELTIAYGQTESSPVIT-QTRTDDSFERRVQ-------------- 361
Query: 253 QPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGE 306
VG+ P +E+K+ G+S G + TRG HVM Y+ A V +
Sbjct: 362 -----TVGRALPQIEVKITLPGTSEEVPRGQQGELCTRGYHVMKGYYKNEEATNEVIDED 416
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
WL TGD+ +D G V + GR I GGENVYP+E+E VL HP I+ VVGI +
Sbjct: 417 GWLHTGDLAEMDHDGYVKITGRLKDMIIRGGENVYPKEIEDVLYTHPAILDAQVVGIPDE 476
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
E A +RL++ +S E L +C+ + + +K P+ F +
Sbjct: 477 TYGEEAAAFIRLKQGKS----------------VSIETLTSYCQSQ-MARYKIPKYFFIT 519
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHLKS 453
+ +P+T++GKI++ ++++ + +K
Sbjct: 520 DE-YPMTASGKIQKFRLKKQALDLIKE 545
>gi|433635586|ref|YP_007269213.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070017]
gi|432167179|emb|CCK64690.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070017]
Length = 547
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 179/394 (45%), Gaps = 49/394 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMA 126
V I +TSGTT PKGV +SH ++ ++GY D P H G + +A
Sbjct: 191 VNIQYTSGTTAYPKGVTLSHRNILNNGYLVGELLGYTAQDRICIPVPFYHCFGMVMGNLA 250
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
GA V P F+ + L AV+ TSL VP + +A L T S++
Sbjct: 251 ATSHGAAMVIPAPGFDPAATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRT 308
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+M++ + + YGMTETS P +
Sbjct: 309 GIMAGAACPVEVMRKVISRMHMPGVSICYGMTETS-------------------PVSTQT 349
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAK 299
+SV + G VG+ PH+E+KV + VG TRG VM YW+
Sbjct: 350 RADDSVDRRVGT-VGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKT 408
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
V + W+ TGD+ +D G V + GR + GGEN+ P E+E +L HP I+
Sbjct: 409 AEVIDADGWMHTGDLAEMDQSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGH 468
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+G+ +A+ E ++A V+LR N L+ E LR++C + + FK
Sbjct: 469 VIGVPDAKYGEELMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKI 512
Query: 420 PRLFVLW-RKPFPLTSTGKIRRDEVRREVMSHLK 452
PR LW FP+T TGK+R+ E+R++ + +L+
Sbjct: 513 PRY--LWIVDEFPMTVTGKVRKVEMRQQALEYLR 544
>gi|309810523|ref|ZP_07704341.1| AMP-binding enzyme [Dermacoccus sp. Ellin185]
gi|308435520|gb|EFP59334.1| AMP-binding enzyme [Dermacoccus sp. Ellin185]
Length = 496
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 180/386 (46%), Gaps = 56/386 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALIV-QSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM 127
+I +TSGTTG PKG ++H L Q + +V DDV + PL H+ GL+ AMA+
Sbjct: 155 VILYTSGTTGRPKGAELTHDNLEKNQDVTARTLVEVTSDDVVMGCLPLFHVFGLTCAMAV 214
Query: 128 -LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 186
+ GA +P+FE ALE +E+ VT VP + + K S++
Sbjct: 215 SVSRGATLTLLPRFEPTKALEIIERDSVTVFEGVPTMYQAMLAAAAKAPEVK-LASLRTC 273
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
++GG +P E++++ F A ++ YG++ETS +F
Sbjct: 274 ISGGSAMPVEVLRKFEERF-DATILEGYGLSETSPVASFNH------------------- 313
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLAKPS 301
PN+ +P +G P VE+KV DG+ VG + RG ++M YW+ KP
Sbjct: 314 -PNAQRKPG--SIGTPIEGVEMKVADLDGNPLPVGEVGEVAVRGHNIMKGYWN----KPE 366
Query: 302 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ + W TGD+ D+ G ++V R I GG NVYP EVE L +HP I +
Sbjct: 367 ETAKAIRDGWFYTGDLARQDEDGFYFIVDRSKDMIIRGGYNVYPREVEEALYEHPEIAEV 426
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG+ + E V A V E SN D ++ ++ +E+ + +K
Sbjct: 427 AVVGVPDEHYGEEVAAFVVRTEG-----SNLD-----------ADAVKAFAKER-VAAYK 469
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVR 444
PR V + + P +TGKI + E+R
Sbjct: 470 YPR-HVTFIETLPKGATGKILKRELR 494
>gi|432340260|ref|ZP_19589709.1| AMP-binding domain protein [Rhodococcus wratislaviensis IFP 2016]
gi|430774710|gb|ELB90289.1| AMP-binding domain protein [Rhodococcus wratislaviensis IFP 2016]
Length = 546
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 176/390 (45%), Gaps = 47/390 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E+D P H G+ +A
Sbjct: 192 IQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYTENDRVCIPVPFYHCFGMVMGNLACT 251
Query: 129 MVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA V P F+ K+ L+AVE TSL VP + +A L S++ +
Sbjct: 252 SHGATMVIPGPSFDPKATLQAVEAEKCTSLYGVPTMF--IAELAEPDFASFDLSSLRTGI 309
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK+ A++ YGMTETS ++ T D T++
Sbjct: 310 MAGSPCPVEVMKQVIEQMGMAEVSICYGMTETSP-VSLQTRSDDTIDQ------------ 356
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ VG+ PH+E+K+ + G + TRG VML YW+
Sbjct: 357 -------RVSTVGRVGPHLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAE 409
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGDIG +D G V + GR + GGENVYP E+E L HP I+ V+
Sbjct: 410 AIDAGRWMHTGDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVI 469
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ +A+ E ++ VR+++ + L + +R+ C K L +K P+
Sbjct: 470 GVPDAKYGEELMVWVRMKDGTE---------------PLDAAKVREFCTGK-LAHYKIPK 513
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+V FP+T TGK+R+ E+R + + L
Sbjct: 514 -YVHVVDEFPMTVTGKVRKVEMREQSLDLL 542
>gi|357402331|ref|YP_004914256.1| Acyl-CoA synthetase member 2 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337768740|emb|CCB77453.1| Acyl-CoA synthetase family member 2, mitochondrial [Streptomyces
cattleya NRRL 8057 = DSM 46488]
Length = 544
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/389 (32%), Positives = 175/389 (44%), Gaps = 55/389 (14%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MA 126
V I +TSGTTG PKG +SH ++ ++GY E D P H G+ +A
Sbjct: 185 VNIQYTSGTTGFPKGATLSHRNILNNGYFVGELLGYTEADRVCLPVPFYHCFGMVMGNLA 244
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--S 182
GAC V P F+ + L AV T+L VP + +A+L + G D S
Sbjct: 245 ATSHGACVVIPAPVFDPAATLRAVRDEGCTALYGVPTMFIAELGL-----PDFAGYDLSS 299
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + G P E+MK A++ YGMTETS T T D LE
Sbjct: 300 LRTGIMAGSPCPVEVMKRVVGEMHMAEVAICYGMTETSPVST-QTRRDDDLER------- 351
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQF 296
+ VG+ PH+E++V + G + TRG VML YW+
Sbjct: 352 ------------RTATVGRVLPHLEVRVADPVTGETVPRGVPGELRTRGYSVMLGYWEDP 399
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
V G+ W+ TGD+ + + G + + GR I GGENVYP E+E L HP I
Sbjct: 400 ERTAEVIDGDGWMHTGDLAVMREDGYLTITGRIKDMIIRGGENVYPREIEEFLHTHPKIA 459
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ VVG+ + R E V+ACV R+ + E + HCR + L
Sbjct: 460 DVQVVGVPDERYGEEVLACVIPRDPADPP---------------TLEEVTAHCRGR-LAH 503
Query: 417 FKAPRLFVLW-RKPFPLTSTGKIRRDEVR 444
FK PRL LW FP+T +GK+R+ E+R
Sbjct: 504 FKIPRL--LWVLDSFPMTVSGKVRKVELR 530
>gi|307545011|ref|YP_003897490.1| acyl-CoA synthetase [Halomonas elongata DSM 2581]
gi|307217035|emb|CBV42305.1| acyl-CoA synthetase [Halomonas elongata DSM 2581]
Length = 560
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 176/390 (45%), Gaps = 48/390 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG+PKG +SH ++ + E D + PL H G+ +
Sbjct: 209 IQYTSGTTGAPKGATLSHHNILNNGFFVARTMKLDETDRMVIPVPLYHCFGMVMGNLGCV 268
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ P F+ + LEAV + T+L VP + +A L + S++ +
Sbjct: 269 THGTAMIYPGDGFDPLATLEAVSEERATALYGVPTMF--IAELEHPEFERFDLSSLRTGI 326
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ ++ YGMTETS ++F T D L+
Sbjct: 327 MAGSICPIEVMRRVIERMNMQEVTICYGMTETSP-VSFQTQTDAPLDK------------ 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCS--DGSS----HVGRILTRGAHVMLRYWDQFLAKPS 301
+ VG PH+E+K+ S DG++ G + TRG VML YW+ A
Sbjct: 374 -------RVTTVGTIHPHLEVKLVSPDDGAAVPRGEPGELCTRGYSVMLGYWNNDEATAD 426
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ ++DD G V +VGR I GGEN+YP E+E L HP I + ++
Sbjct: 427 AIDAAGWMHTGDLATMDDEGYVAIVGRIKDMIIRGGENIYPREIEDFLYTHPAISDVQII 486
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E ++A V+L E L E L+ C E + FK PR
Sbjct: 487 GVPDEKYGEEIMAWVKLSEGED----------------LDEEGLKAFC-EGRIAHFKVPR 529
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+V + FP+T TGKI++ ++R E + L
Sbjct: 530 -YVKFVDEFPMTVTGKIQKFKMREEAVHEL 558
>gi|302530557|ref|ZP_07282899.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. AA4]
gi|302439452|gb|EFL11268.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. AA4]
Length = 546
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 180/390 (46%), Gaps = 47/390 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E+D P H G+ +A
Sbjct: 185 IQYTSGTTGFPKGATLSHHNILNNGYFVGELCNYTEEDRVCIPVPFYHCFGMVMGNLACT 244
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GAC V P F+ K+ L AV TSL VP + +A L + S++ +
Sbjct: 245 SHGACMVIPAPAFDPKATLAAVAAERCTSLYGVPTMF--IAELNHPEFETFDLGSLRTGI 302
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK+ + ++ YGMTETS T T D ++E
Sbjct: 303 MAGSPCPVEVMKQVIDRMGMTEVSICYGMTETSPVST-QTRADDSVER------------ 349
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ VG+ PH+E KV + G + TRG VML YW++
Sbjct: 350 -------RVSTVGRVGPHLESKVVDPETGLTVPRGTPGELCTRGYSVMLGYWEEPEKTAE 402
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ +DD G + + GR + GGEN+YP E+E L HP ++ V+
Sbjct: 403 AIDAARWMHTGDLAIMDDEGYLNITGRIKDMVIRGGENIYPREIEEFLYTHPDVLDAQVI 462
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E ++A +R+RE + L+ E +R+ C+ K L +K PR
Sbjct: 463 GVPDVKYGEELMAWIRMREGAE---------------PLTVESVREFCQGK-LAHYKIPR 506
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
++ + FP+T TGK+R+ E+R++ ++ L
Sbjct: 507 -YIHVVEEFPMTVTGKVRKVEMRQQSVTLL 535
>gi|408383162|ref|ZP_11180700.1| AMP-binding domain protein [Methanobacterium formicicum DSM 3637]
gi|407814080|gb|EKF84717.1| AMP-binding domain protein [Methanobacterium formicicum DSM 3637]
Length = 553
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 172/382 (45%), Gaps = 47/382 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMV 130
+TSGTTG PKGV+++H ++ + E D T PL H G+ A MA
Sbjct: 196 YTSGTTGFPKGVMLTHRNILNNGYYIGERQKFTEKDRLCITVPLFHCFGIVLAVMATFSH 255
Query: 131 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
GA V + F+ L AV++ T+L VP + +A S++ + G
Sbjct: 256 GATMVMVELFDPLLVLAAVQKERCTALYGVPTMF--IAEYSHPMFDMFDLSSLRTGIMAG 313
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P E MK N ++ S YG+TE S T ++ DP
Sbjct: 314 STPPIEAMKRVVNDMNMTQITSVYGLTEGSPGFTQTSVDDPL------------------ 355
Query: 251 VHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
+ + VGKP P E+K+ G G I +G +VM Y+ V
Sbjct: 356 --EKRVETVGKPLPECEVKIVDPETGETLGPHQTGEICCKGYNVMKGYYKMPDKTREVID 413
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
+ WL +GD+ S+D+ G +VGR I GGEN+YP E+E L PG++ + VVGI+
Sbjct: 414 EDGWLHSGDLASVDEEGYYSIVGRIKDMIIRGGENIYPREIEEFLYTMPGVLDVQVVGIS 473
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ + E+V AC+ L E + +E + +R + R K + FK P+ V
Sbjct: 474 DEKYGEIVGACIILEEDAELTEED----------------VRDYARTK-IARFKVPK-HV 515
Query: 425 LWRKPFPLTSTGKIRRDEVRRE 446
+ FPLT++GKI++ +R +
Sbjct: 516 FFVDEFPLTASGKIQKFILREQ 537
>gi|229122580|ref|ZP_04251791.1| AMP-dependent synthetase and ligase [Bacillus cereus 95/8201]
gi|228660832|gb|EEL16461.1| AMP-dependent synthetase and ligase [Bacillus cereus 95/8201]
Length = 522
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 194/389 (49%), Gaps = 50/389 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLS-SAMAM 127
I +TSGTTG+PKGV+++H A +VQS I + + DV++ +APL HI G++ + +
Sbjct: 173 ILYTSGTTGTPKGVMVTHRA-VVQSARTIGTELHCTQKDVFIISAPLFHIFGMAINMLCA 231
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ +G + KF+ + L+ +EQ VT VP + L K S++ L
Sbjct: 232 VAMGGRIILQEKFQPRETLQLIEQEKVTIQKGVPTMFIKELELEDFDKY--NLSSLRAGL 289
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G +P++ + E L ++G+TET S MT YD T + NVT
Sbjct: 290 VGAAPIPAKTVTEIRERM-GINLCQSFGITETVS--ITMTSYDDTKQ----------NVT 336
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSV 302
+GK P V +K+ + S VG I +G VM Y++ V
Sbjct: 337 ET---------LGKAIPGVTMKIVDENRVALPSGEVGEIAVKGFGVMKGYYNMPEQTNQV 387
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ W +GD+G++D G + VGR+ I GG NVYP+E+EAV+++HP +I V+G
Sbjct: 388 LDNDGWYYSGDLGTLDTQGYLRFVGRKKEMIIRGGLNVYPQEIEAVIMKHPKVIEAAVIG 447
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + L E+ A +RL+ + +E E ++ + +EK + +K P
Sbjct: 448 LPDKVLGEVACAVIRLKNGEESTE----------------EEIKLYLKEK-MAIYKLPEK 490
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
V++ FP+T++GKI++ ++ +V S++
Sbjct: 491 -VIFTDEFPVTASGKIQKLRLKEQVSSNI 518
>gi|398952615|ref|ZP_10674890.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
gi|398154925|gb|EJM43385.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
Length = 507
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 181/389 (46%), Gaps = 47/389 (12%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
E I +T GTTG PKGV+ SH L + ++ + D LH APL H+ G++ A
Sbjct: 158 EDLACIMYTGGTTGFPKGVMQSHLNLWSACMPRMVDMPPIRDGRLLHVAPLFHVAGMARA 217
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ M G HV + F++ L+ +E+ +T + VP ++ LA L S+K
Sbjct: 218 LIQFMAGESHVLLSSFDAAQVLQVIERERITETLLVPTMI--LALLAHPDFDRHDLGSLK 275
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
++ G E++++ P +L +YG+TE ++ LP
Sbjct: 276 RLTYGASPSAGEMVEQVLARLPDLELSHSYGLTEACPVVS------------SNLP---C 320
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGR-----ILTRGAHVMLRYWDQFLAK 299
N TP + VG+ V +K+ V R I+ RG ++M YW+ K
Sbjct: 321 NHTPQARKSGLSRSVGRGGLGVNVKIVDPQGQEVARGTVGEIIVRGPNIMQGYWN----K 376
Query: 300 PSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
P + + WL TGD +D+ G +++V R I SGGENVY EVE VL +HP +
Sbjct: 377 PEETARALRDGWLYTGDAAWMDEQGYLFIVDRLKDMIVSGGENVYSAEVENVLARHPAVA 436
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
V+G+A+ + E V A V + Q + +E LR++CRE +
Sbjct: 437 LCAVIGVAHEQWGEAVHAVVVRKPGAQ----------------VDAEQLRRYCRE-FIAP 479
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
+K P+ V +R PL++ GK+ + E+R+
Sbjct: 480 YKCPKT-VEFRDELPLSAAGKVLKRELRQ 507
>gi|398844830|ref|ZP_10601884.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
gi|398254189|gb|EJN39292.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
Length = 557
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 175/382 (45%), Gaps = 47/382 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG +SHS ++ +G E D + PL H G+ A M
Sbjct: 206 IQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHDRLVVPVPLYHCFGMVMANLGCM 265
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ P F++ + L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTLIYPNDAFDALATLRAVAEEKATALYGVPTMF--IAELDHPQRRDFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ + A++ AYGMTETS ++ T + LE VT
Sbjct: 324 MAGATCPIEVMRRVIDEMHMAEVQIAYGMTETSP-VSLQTGANDDLER---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E KV DG++ +G + TRG VML YW+ A
Sbjct: 374 ----------SVGRTQPRLENKVVDGDGNTVPCGEIGELCTRGYSVMLGYWNNPKATAQS 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
E W+ TGD+ +D+ G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDAEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ +R E +VA VRL SE LR+ R + + FK PR
Sbjct: 484 VPCSRYGEEIVAWVRLHPGHVASEDE----------------LREWARAR-IAHFKVPRY 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVR 444
F + FP+T TGK+++ +R
Sbjct: 527 FRFVDE-FPMTVTGKVQKFRMR 547
>gi|393202353|ref|YP_006464195.1| acyl-CoA synthetase/AMP-acid ligase II [Solibacillus silvestris
StLB046]
gi|327441684|dbj|BAK18049.1| acyl-CoA synthetase/AMP-acid ligase II [Solibacillus silvestris
StLB046]
Length = 492
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 189/392 (48%), Gaps = 46/392 (11%)
Query: 57 PFTHSW--APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAP 114
P T+ W P+ ++ +T GTTG PKGVV+S+ A+ ++ + G + D L+ P
Sbjct: 134 PTTYKWRDEPQLPWMMIYTGGTTGKPKGVVLSYEAVTTNAINTVISWGLNDKDCTLNYMP 193
Query: 115 LCHIGGLSS-AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV 173
L H GG+++ A+ +LM G V KF+ + A+ AV+++ T + VP + +
Sbjct: 194 LFHTGGINALALPILMAGGTVVIGQKFDPERAVRAVDEYKTTVSLFVPTMYQSIIETDYF 253
Query: 174 KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI--SAYGMTETSSSLTFMTLYDP 231
K++ +VK L+GG P K F K L YG+TE + F +
Sbjct: 254 KQS--SFPTVKLFLSGGAPCP----KPVYECFLKRGLFFKEGYGLTEAGPN-NFYIDAEI 306
Query: 232 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLR 291
+ G + ++ + N V + E ++C++G VG + +G+HV
Sbjct: 307 AMNKKGAIGKS---MLFNEVK----------IINKEGQLCAEG--EVGELCLKGSHVFTH 351
Query: 292 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
YW A G WL TGD+ D+ G+ ++VGR+ I +GGENVYP+EVE L+
Sbjct: 352 YWKNEEATSQTFEGG-WLKTGDLAKFDEDGDYYIVGRKKEMIITGGENVYPQEVEQCLIA 410
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
H + + V+GI N + E VVA V S + L SE+L+ +C+E
Sbjct: 411 HEAVQEVSVIGIPNEKWGECVVAFV---------------ISGDPSEQLQSELLK-YCKE 454
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 443
+ L +K P+ + + + P T GKI + ++
Sbjct: 455 R-LANYKVPKQ-IYFLQELPKTVVGKIDKKQL 484
>gi|73537349|ref|YP_297716.1| long-chain-fatty-acid--CoA ligase [Ralstonia eutropha JMP134]
gi|72120686|gb|AAZ62872.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 525
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 193/434 (44%), Gaps = 54/434 (12%)
Query: 20 IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 79
+P+LR V++ + D+ +D + P TH P+ V+ +TSGTTG
Sbjct: 125 LPALRGVVAMEDAVVDWPAYQDWRDGQA-------TTPPTHVSRPDDVVLQLYTSGTTGR 177
Query: 80 PKGVVISHSALIVQSL----AKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHV 135
PKG +++H L V ++ IA + + DDV L P+ HIGG + L+ GA +
Sbjct: 178 PKGAMLTHRNLTVSAIIAERENIAWLRWVPDDVSLVAMPVAHIGGTGWGLRGLLAGAKGI 237
Query: 136 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 195
+ F+ + L+ + ++ L VP+ + + R ++ R ++ ++ G +P+
Sbjct: 238 VVRDFDPRRVLDFIANDRISKLFLVPSAIQIVLRDPRARQVNYSR--LRYLIYGSAPMPA 295
Query: 196 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 255
+L++E F + YGMTET+ S+T + D A GN
Sbjct: 296 DLLREGMEVF-GCGFVQTYGMTETTGSVTGLMPED----------HASGNTALLR----- 339
Query: 256 GVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 310
G+ P E+ V HV G ++ R M YW Q + WL
Sbjct: 340 --AAGRALPWAEVAVVDAAGKHVPPGEVGEVIVRSLQTMAGYWKQPEETARAIDADGWLR 397
Query: 311 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 370
TGD G +D +++ R I SGGENVYP EVE + HP + + V+G+ +AR E
Sbjct: 398 TGDAGYMDADDYLYIHDRVKDMIISGGENVYPAEVENAIYGHPHVAEVAVIGVPDARWGE 457
Query: 371 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 430
V A V R+ + +++L Q RE+ L GFK P+ + +
Sbjct: 458 AVKAIVVPRDG---------ATPDARDIL-------QWARER-LAGFKLPK-SIDFVDAL 499
Query: 431 PLTSTGKIRRDEVR 444
P +GK+ R ++R
Sbjct: 500 PRNPSGKVLRRQLR 513
>gi|383763835|ref|YP_005442817.1| long-chain-fatty-acid--CoA ligase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384103|dbj|BAM00920.1| long-chain-fatty-acid--CoA ligase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 493
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 171/389 (43%), Gaps = 53/389 (13%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ ++ +TSGTTG PKG ++H L + + DDV LH PL H+ GL
Sbjct: 142 PDATCLMIYTSGTTGWPKGAELTHRNLTANLNSLHEAWEWQNDDVLLHVLPLFHVHGLIV 201
Query: 124 AM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
A+ L GA V +P+FE LE + + T + VP I L ++
Sbjct: 202 ALHGALNAGATTVLLPRFEPLQTLELLVRRPCTVFMGVPTIHRRLVEAPGAERY--SLQH 259
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + +G LP +L F +L+ YGM+E
Sbjct: 260 MRLVTSGSDRLPDDLFYRFEKQF-GVQLLERYGMSEA----------------------- 295
Query: 243 FGNVTPNSVHQPQGV-CVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQ 295
G + N +H + V VG P P VE+++ ++ VG + RG +V YW Q
Sbjct: 296 -GMILSNPLHGERRVGSVGLPLPGVEVRIADPETNAPLPDGQVGEVQVRGENVCKGYWRQ 354
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
+ T + WL TGD+G + G L GR I SGG NVYP EVE VL +HP +
Sbjct: 355 PEKTAAAFTPDGWLRTGDLGLREPDGYFTLKGRAKDLIISGGYNVYPPEVERVLNEHPAV 414
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
V+G +A E V+A V LR + E + Q CRE+ L
Sbjct: 415 EASAVIGCPDAEWGERVIAIVELRSG----------------VRAEPEEIMQFCRER-LA 457
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+KAPR VL+ P P + GK+++ +R
Sbjct: 458 PYKAPRQ-VLFTAPLPRNALGKVQKSALR 485
>gi|358448423|ref|ZP_09158927.1| AMP-binding domain protein [Marinobacter manganoxydans MnI7-9]
gi|357227520|gb|EHJ05981.1| AMP-binding domain protein [Marinobacter manganoxydans MnI7-9]
Length = 562
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 176/384 (45%), Gaps = 47/384 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I FTSGTTG+PKG ++H ++ E D + PL H G+ +
Sbjct: 208 IQFTSGTTGNPKGATLTHHNILNNGYFVGESQILTEKDRLVIPVPLYHCFGMVMGNLGCI 267
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ P FE KS L+AV Q T+L VP + +A L + S++ +
Sbjct: 268 THGSTMIYPGEGFEPKSVLQAVHQEKATALYGVPTMF--IAELAEPEFETYDLSSLRTGI 325
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P+E+MK+ ++ AYGMTETS T + DP
Sbjct: 326 MAGSICPAEVMKKVNGKMNMKEVQIAYGMTETSPVSTQTSSLDP---------------- 369
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ Q VG+ PH+E K+ G+ +V G + TRG VML+YW+
Sbjct: 370 ----FEKQVTTVGRTQPHLETKIVDPGTGNVVPRGEIGELCTRGYSVMLKYWNNEEKTRE 425
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ ++D+ G V +VGR + GGEN+YP+E+E L HP I + V
Sbjct: 426 AIDSAGWMHTGDLATMDEEGYVQIVGRIKDMVIRGGENIYPKEIEEFLYTHPAIEEVQVT 485
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI + + E ++A V+L D + +++E L+ C+ K + FK P+
Sbjct: 486 GIPDDKYGEELIAWVKLAP---------DAAP------VTAEDLQAFCKGK-IAHFKIPK 529
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRR 445
+ + FP+T TGKI++ ++R
Sbjct: 530 NYKFVDE-FPMTVTGKIQKFKMRE 552
>gi|419961133|ref|ZP_14477142.1| AMP-binding domain protein [Rhodococcus opacus M213]
gi|414573454|gb|EKT84138.1| AMP-binding domain protein [Rhodococcus opacus M213]
Length = 545
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 175/388 (45%), Gaps = 47/388 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E+D P H G+ +A
Sbjct: 192 IQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYTENDRVCIPVPFYHCFGMVMGNLACT 251
Query: 129 MVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA V P F+ K+ L+AVE TSL VP + +A L S++ +
Sbjct: 252 SHGATMVIPGPSFDPKATLQAVEAEKCTSLYGVPTMF--IAELAEPDFASFDLSSLRTGI 309
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK+ A++ YGMTETS ++ T D T++
Sbjct: 310 MAGSPCPVEVMKQVIEQMGMAEVSICYGMTETSP-VSLQTRSDDTIDQ------------ 356
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ VG+ PH+E+K+ + G + TRG VML YW+
Sbjct: 357 -------RVSTVGRVGPHLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAE 409
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGDIG +D G V + GR + GGENVYP E+E L HP I+ V+
Sbjct: 410 AIDAGRWMHTGDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVI 469
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ +A+ E ++ VR+++ + L + +R+ C K L +K P+
Sbjct: 470 GVPDAKYGEELMVWVRMKDGAE---------------PLDAAKVREFCTGK-LAHYKIPK 513
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMS 449
+V FP+T TGK+R+ E+R + +
Sbjct: 514 -YVHVVDEFPMTVTGKVRKVEMREQSLD 540
>gi|118477388|ref|YP_894539.1| acyl-CoA synthetase [Bacillus thuringiensis str. Al Hakam]
gi|118416613|gb|ABK85032.1| acyl-CoA synthase [Bacillus thuringiensis str. Al Hakam]
Length = 496
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 187/393 (47%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTIHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE AL +E+H VT ++ VP I L + + T SV+
Sbjct: 210 FPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP + ++ + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TEETIQDG--WLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG + + E+ +A + K+ +L+ +V+ +HCR L +
Sbjct: 422 VAVVGRQHVKWGEIPIAFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ +++ K P +TGKI++ ++ ++ S
Sbjct: 465 KIPKE-IVFLKELPKNATGKIQKAQLVNQLKSR 496
>gi|228946642|ref|ZP_04108951.1| AMP-dependent synthetase and ligase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228813061|gb|EEM59373.1| AMP-dependent synthetase and ligase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 522
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 194/389 (49%), Gaps = 50/389 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLS-SAMAM 127
I +TSGTTG+PKGV+++H A +VQS I + + DV++ +APL HI G++ + +
Sbjct: 173 ILYTSGTTGTPKGVMVTHRA-VVQSAQTIGTELHCTQKDVFIISAPLFHIFGMAINMLCA 231
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ +G + KF+ + L+ +EQ VT VP + L K S++ L
Sbjct: 232 VAMGGRIILQEKFQPRETLQLIEQEKVTIQKGVPTMFIKELELEDFDKY--NLSSLRAGL 289
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G +P++ + E L ++G+TET S MT YD T + N+T
Sbjct: 290 VGAAPIPAKTVTEIRERM-GINLCQSFGITETVS--ITMTSYDDTKQ----------NIT 336
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSV 302
+GK P V +K+ + S VG I +G VM Y++ V
Sbjct: 337 ET---------LGKAIPGVTMKIVDENRVALPSGEVGEIAVKGFGVMKGYYNMPEQTNQV 387
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ W +GD+G++D G + VGR+ I GG NVYP+E+EAV+++HP +I V+G
Sbjct: 388 LDNDGWYYSGDLGTLDSQGYLRFVGRKKEMIIRGGLNVYPQEIEAVIMKHPKVIEAAVIG 447
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + L E+ A +RL+ + +E E ++ + +EK + +K P
Sbjct: 448 LPDKVLGEVACAVIRLKNGEESTE----------------EEIKFYLKEK-MAIYKLPEK 490
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
V++ FP+T++GKI++ ++ +V S++
Sbjct: 491 -VIFTDEFPVTASGKIQKLRLKEQVSSNI 518
>gi|226365555|ref|YP_002783338.1| AMP-binding domain protein [Rhodococcus opacus B4]
gi|226244045|dbj|BAH54393.1| putative fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 545
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 179/395 (45%), Gaps = 47/395 (11%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
+P+ + I +TSGTTG PKG +SH ++ + Y E+D P H G+
Sbjct: 185 SPDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYTENDRVCIPVPFYHCFGMV 244
Query: 123 SAMAMLMVGACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ IP F+ K+ L+AVE TSL VP + +A L
Sbjct: 245 MGNLACTSHGATMVIPGRSFDPKATLQAVEAEKCTSLYGVPTMF--IAELADHDFDSYDL 302
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
S++ + G P E+MK A++ YGMTETS P
Sbjct: 303 SSLRTGIMAGSPCPVEVMKHVIELMGMAEVSICYGMTETS-------------------P 343
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWD 294
+ + +++ Q + VG+ PH+E+K+ + G + TRG VML YW+
Sbjct: 344 VSLQTRSNDTIDQ-RVSTVGRVGPHLEIKIVDPATGLTVPRGEPGELCTRGYSVMLGYWN 402
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
W+ TGDIG +D G V + GR + GGENVYP E+E L HP
Sbjct: 403 NPEKTAEAIDAGRWMHTGDIGVMDCDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPD 462
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
I+ V+G+ +A+ E ++ VR++E + E L +++V R+ C K L
Sbjct: 463 ILDAQVIGVPDAKYGEELMVWVRMKE--------------DTEPLDAAKV-REFCTGK-L 506
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 449
+K P+ +V FP+T TGK+R+ E+R + +S
Sbjct: 507 AHYKIPK-YVHVVDEFPMTVTGKVRKVEMREQSLS 540
>gi|405976077|gb|EKC40598.1| Acyl-CoA synthetase family member 2, mitochondrial [Crassostrea
gigas]
Length = 606
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 210/452 (46%), Gaps = 56/452 (12%)
Query: 6 ESSDSWYLELQHTAIPSLRWHVSLGSSSS-DFVNKRDMLTADILKGYS-LRSLPFTHSWA 63
E +++ +Q +P L+ + +G+ S +N D++ A K + +++L +
Sbjct: 185 ELANTKSAHIQSHLLPELKHIIMMGNKSHMGTINFNDIMKAGTTKDRTEIQNL--QNRLQ 242
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-APLCHIGGLS 122
+ + I FTSGTTG+PKGV +SH ++ S + Y ++ + PL H G+
Sbjct: 243 FDEPINIQFTSGTTGNPKGVTLSHHNIVNNSYFVAQRLNYHTNETTICIPVPLYHCFGMV 302
Query: 123 -SAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
++ + GA V+ F++ L+A Q TS+ VP + D+ +
Sbjct: 303 LGSLCTVTAGATCVYPSSTFDAGKTLKAAAQERCTSMYGVPTMFIDMLN----HHDFDSF 358
Query: 181 D--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
D S+ + G P E +K+ + ++ YG+TETS P
Sbjct: 359 DLSSLYTGVMAGSPCPIETLKQVISRMNMDRVTVCYGLTETS----------PVTH---- 404
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW 293
Q+F P + + VGKP HVE KV ++ G + TRG + ML YW
Sbjct: 405 --QSF----PTDPAEKRVATVGKPHSHVECKVIAENGEICPIGTPGELCTRGYNTMLYYW 458
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
D+ + + W TGDI +D+ G +VGR I GGENVYP E+E ++ +HP
Sbjct: 459 DEPTKTKEAISLDRWYHTGDIAQMDEDGFCKIVGRIKDMIIRGGENVYPTEIEQLIYKHP 518
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
+ + VVG+ + RL E + A ++++E+ SE ++ +C+EK
Sbjct: 519 KVKDVQVVGVPDERLGEEICAWIQVKENQSISEDE----------------IKSYCKEK- 561
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
L +K P+ ++ FPLT TGK+++ +++
Sbjct: 562 LARYKVPK-YISIVTEFPLTVTGKVQKYKIQE 592
>gi|410090765|ref|ZP_11287350.1| AMP-binding domain protein [Pseudomonas viridiflava UASWS0038]
gi|409761922|gb|EKN46964.1| AMP-binding domain protein [Pseudomonas viridiflava UASWS0038]
Length = 557
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 174/382 (45%), Gaps = 47/382 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ +G G +D + PL H G+ +A L
Sbjct: 204 IQYTSGTTGFPKGATLSHRNILNNGYMVGYNLGLGSEDRLVIPVPLYHCFGMVMGNLACL 263
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA ++ P FE + LEAV T L VP + + L + S+K +
Sbjct: 264 THGATMIYPAPSFEPLATLEAVASERATFLYGVPTMF--IKELDLPDRQALDLSSLKGGI 321
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M++ + + + AYGMTETS ++ T D LE VT
Sbjct: 322 MAGSICPIEVMRQVIDQMHMSGVQIAYGMTETSP-VSLQTSNDDPLEL---------RVT 371
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ PH+E KV ++ VG + TRG VML YW A
Sbjct: 372 ----------SVGRTQPHLEHKVIDTDANTVERGQVGELCTRGYSVMLGYWQDAEATARD 421
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
E W+ TGD+ +D G V +VGR I GGEN+YP E+E +LLQH I VVG
Sbjct: 422 IDAEGWMHTGDLVQMDADGYVTIVGRSKDMIIRGGENIYPREIEELLLQHSDIAEAYVVG 481
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I R E +VA VRL C++ +LR R + + FK PR
Sbjct: 482 IPCDRYGEDLVAWVRLHPG-----HVCEEP-----------LLRDFFRSR-VAHFKVPRH 524
Query: 423 FVLWRKPFPLTSTGKIRRDEVR 444
F + FP+T TGK+++ +R
Sbjct: 525 F-FFVDEFPMTVTGKVQKFRLR 545
>gi|196032125|ref|ZP_03099539.1| long-chain acyl-CoA synthetase [Bacillus cereus W]
gi|218904156|ref|YP_002451990.1| long-chain acyl-CoA synthetase [Bacillus cereus AH820]
gi|195994876|gb|EDX58830.1| long-chain acyl-CoA synthetase [Bacillus cereus W]
gi|218538698|gb|ACK91096.1| long-chain acyl-CoA synthetase [Bacillus cereus AH820]
Length = 518
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 194/389 (49%), Gaps = 50/389 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLS-SAMAM 127
I +TSGTTG+PKGV+++H A +VQS I + + DV++ +APL HI G++ + +
Sbjct: 169 ILYTSGTTGTPKGVMVTHRA-VVQSARTIGTELHCTQKDVFIISAPLFHIFGMAINMLCA 227
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ +G + KF+ + L+ +EQ VT VP + L K S++ L
Sbjct: 228 VAMGGRIILQEKFQPRETLQLIEQEKVTIQKGVPTMFIKELELEDFDKY--NLSSLRAGL 285
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G +P++ + E L ++G+TET S MT YD T + N+T
Sbjct: 286 VGAAPIPAKTVTEIRERM-GINLCQSFGITETVS--ITMTSYDDTKQ----------NIT 332
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSV 302
+GK P V +K+ + S VG I +G VM Y++ V
Sbjct: 333 ET---------LGKAIPGVTMKIVDENRVALPSGEVGEIAVKGFGVMKGYYNMPEQTNQV 383
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ W +GD+G++D G + VGR+ I GG NVYP+E+EAV+++HP +I V+G
Sbjct: 384 LDNDGWYYSGDLGTLDSQGYLRFVGRKKEMIIRGGLNVYPQEIEAVIMKHPKVIEAAVIG 443
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + L E+ A +RL+ + +E E ++ + +EK + +K P
Sbjct: 444 LPDKVLGEVACAVIRLKNGEESTE----------------EEIKLYLKEK-MAIYKLPEK 486
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
V++ FP+T++GKI++ ++ +V S++
Sbjct: 487 -VIFTDEFPVTASGKIQKLRLKEQVSSNI 514
>gi|323487936|ref|ZP_08093192.1| AMP-binding domain protein [Planococcus donghaensis MPA1U2]
gi|323398360|gb|EGA91150.1| AMP-binding domain protein [Planococcus donghaensis MPA1U2]
Length = 547
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 183/397 (46%), Gaps = 47/397 (11%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IG 119
S P+ + I +TSGTTG PKGV+++H ++ + E D P H G
Sbjct: 185 SMNPDDVINIQYTSGTTGFPKGVMLTHLNVVNNGKLVGDTMALTEKDRLCIPVPFFHCFG 244
Query: 120 GLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
+ MA + V +FE K L+ V+ T L VP + +A L + +
Sbjct: 245 CVLGTMAAVTHSTTMVIAEQFEPKRVLQMVQDEKCTGLHGVPTMF--IAELNHPEFSTFD 302
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
+++ + G P E+MK+ N +++ AYG TE+S +T T D +E
Sbjct: 303 TSTLRTGIMAGSSCPIEVMKKVINEMGASEITIAYGQTESSPVIT-QTRADDDIEK---- 357
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW 293
+ VGKP VE+K+ + G + TRG HVM Y+
Sbjct: 358 ---------------RVSTVGKPHAGVEVKIIDPATGDEVELGLPGELCTRGYHVMSGYY 402
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
A E WL TGDI D+ G + + GR + GGEN+YP E+E L QHP
Sbjct: 403 KNEDATKMAIDSEGWLHTGDIAVEDEEGYIDITGRIKDMVIRGGENIYPREIEEFLYQHP 462
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
++ + V+G+ + + E ++A + L+E Q L++E LR +C+ K
Sbjct: 463 SVLDVQVIGVPDPKYGEELMAWIILKEGEQ----------------LNAEELRTYCKGK- 505
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
++ K PR ++ + K +P+T++GKI++ ++R + H
Sbjct: 506 ISHHKIPR-YIEFTKEYPMTASGKIQKFKLRELSIEH 541
>gi|126667842|ref|ZP_01738808.1| acyl-CoA synthase [Marinobacter sp. ELB17]
gi|126627658|gb|EAZ98289.1| acyl-CoA synthase [Marinobacter sp. ELB17]
Length = 543
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 176/384 (45%), Gaps = 47/384 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I FTSGTTGSPKG ++H ++ E D + PL H G+ +
Sbjct: 189 IQFTSGTTGSPKGAALTHHNILNNGFFVGESQRLSEKDRLVIPVPLYHCFGMVMGNLGCV 248
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ P FE K+ L+AV Q T+L VP + +A L + +++ +
Sbjct: 249 THGSTMIYPGEGFEPKAVLQAVHQEKATALYGVPTMF--IAELADPEFETYDLSTLRTGI 306
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P+E+MK+ ++ AYGMTETS T + DP
Sbjct: 307 MAGSICPAEVMKKVNGKMNMKEVQIAYGMTETSPVSTQTSAQDP---------------- 350
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ Q VG+ PH+E K+ S ++ G + TRG VML+YW+
Sbjct: 351 ----FEKQVTTVGRTQPHLESKIVEPASGNIVPRGEIGELCTRGYSVMLKYWNNAEKTRE 406
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ ++D+ G + +VGR + GGEN+YP+EVE L HP I + V
Sbjct: 407 TIDDAGWMHTGDLATMDEDGYIQIVGRIKDMVIRGGENIYPKEVEEFLYTHPSIEEVQVT 466
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E +VA V+LR D S + + L++ C+ + + +K PR
Sbjct: 467 GVPDEKFGEELVAWVKLRP---------DADSVDADDLIA------FCKGQ-IAHYKIPR 510
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRR 445
+ + + FP+T TGKI++ ++R
Sbjct: 511 NY-KFVEAFPMTVTGKIQKFKMRE 533
>gi|345002934|ref|YP_004805788.1| AMP-dependent synthetase and ligase [Streptomyces sp. SirexAA-E]
gi|344318560|gb|AEN13248.1| AMP-dependent synthetase and ligase [Streptomyces sp. SirexAA-E]
Length = 536
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 174/384 (45%), Gaps = 49/384 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ +V Y E D P H G+ + +
Sbjct: 188 IQYTSGTTGFPKGATLSHHNILNNGYFVGEMVAYTEHDRVCLPVPFYHCFGMVMGNLGIT 247
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GAC V P FE + LEAV++ TSL VP + +A L S++ +
Sbjct: 248 SHGACIVIPAPAFEPAAVLEAVQRERCTSLYGVPTMF--IAELDLPDFAAYDLSSLRTGI 305
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK ++ YGMTETS T T D LE
Sbjct: 306 MAGSPCPVEVMKRVVAEMHMEEVSICYGMTETSPVST-QTRRDDDLER------------ 352
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-------GRILTRGAHVMLRYWDQFLAKP 300
+ VG+ PH+E+KV +D + V G + TRG VML YWD+
Sbjct: 353 -------RTGTVGRALPHIEVKV-TDPVTGVTLPRGAAGELCTRGYSVMLGYWDEPERTA 404
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
V W+ TGD+ + + G V ++GR I GGENVYP E+E L HP I + V
Sbjct: 405 EVVDAGRWMHTGDLAVMREDGYVRIIGRIKDMIIRGGENVYPREIEEFLYGHPKIADVQV 464
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VG+A+ + E ++ACV R+ + E + +CRE+ L +K P
Sbjct: 465 VGVADEKYGEEILACVIPRDPAAPP---------------TLEEVTAYCREQ-LAHYKIP 508
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVR 444
R + FP+T +GK+R+ ++R
Sbjct: 509 RRLRIL-DTFPMTVSGKVRKIDLR 531
>gi|163789385|ref|ZP_02183824.1| putative acyl-CoA synthetase [Carnobacterium sp. AT7]
gi|159875239|gb|EDP69304.1| putative acyl-CoA synthetase [Carnobacterium sp. AT7]
Length = 503
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 182/399 (45%), Gaps = 56/399 (14%)
Query: 56 LPF-THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAP 114
+PF + S E V++ +T+GTTG PKG +I+H+ ++ S+ I +D+ + +AP
Sbjct: 140 VPFLSESIELESPVMLIYTTGTTGDPKGAIITHNGMVNNSMNTIISWNITHEDITIASAP 199
Query: 115 LCHIGGLSSAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRV 173
+ HI G+S + LM+ V I + F+ + E ++Q+ T L VP + L +
Sbjct: 200 MFHIAGISGMIIPLMLIGGKVIIDRYFDGTNTNEMIKQYKPTMLFMVPTMYYGLISATNF 259
Query: 174 KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAK--LISAYGMTETSSSLTFMTLYDP 231
K SV + GG S +KE N F K LI++YG+TE
Sbjct: 260 HK--DNLASVHTFVAGG----SPPLKEVVNYFVSEKLPLINSYGLTEVG----------- 302
Query: 232 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGA 286
P F ++ ++ P +G P+ VE K+ +D V G +L G
Sbjct: 303 --------PNNFKLMSETALQHP--FSIGYPSFFVEAKIVNDQDEEVEQGQIGELLLAGQ 352
Query: 287 HVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 346
H YW + G+ ++ TGD+ D+ G ++V R+ I +GGENV P EVE
Sbjct: 353 HTFAGYWQKQEETAKAFLGD-FVRTGDLAKKDENGLFYIVDRKKEMIITGGENVLPSEVE 411
Query: 347 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 406
VL HP + VVVG + R + V A + ++ + SE+ DQ +
Sbjct: 412 RVLNAHPAVKDSVVVGYEHPRYGQSVGAAIIFKDK-ERSEAELDQYMTD----------- 459
Query: 407 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
NL G+K P+ + L+ FP S GK + E+ R
Sbjct: 460 ------NLAGYKTPKHY-LFVDVFPTNSVGKTDKKEIIR 491
>gi|73541161|ref|YP_295681.1| AMP-binding protein [Ralstonia eutropha JMP134]
gi|72118574|gb|AAZ60837.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 578
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 205/451 (45%), Gaps = 60/451 (13%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADIL----KGYSLRSL-PFTHSWAPEGAVI 69
LQ +P LRW + + + + MLT L G + L T +
Sbjct: 168 LQAARLPELRWVIRMENKPTP-----GMLTWQELHARGAGLPVSELDAITAQLDRHDPIN 222
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
+ FTSGTTG+PKG ++H ++ + A + + E D PL H G+ A +A +
Sbjct: 223 VQFTSGTTGAPKGATLTHRNILNNARHIAAAMRFTEQDKLCIPVPLYHCFGMVLAVLACV 282
Query: 129 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GAC VF + FE + + AV + T+L VP + +A L + + +++ +
Sbjct: 283 STGACMVFPGEAFEPVATMSAVSEERCTALHGVPTMF--IAQLDHPEFSRFDFSTLRTGI 340
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK A++ AYGMTETS P +F + T
Sbjct: 341 MAGSPCPIEVMKRVVADMHMAEVTIAYGMTETS-------------------PVSFQSST 381
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ + + + VG+ PH+E KV D + + G + TRG VML YWD A+ S
Sbjct: 382 NDPLDK-RVSTVGRVQPHLECKVV-DATGQIVPVGETGELCTRGYSVMLGYWDD-EARTS 438
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ + W+ TGD+ +ID G +VGR + GGENVYP E+E L +HP + + V
Sbjct: 439 EAIRDGWMHTGDLATIDAEGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVQVF 498
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E + A V L+ +E +R CR++ + +K PR
Sbjct: 499 GVPDQKYGEEICAWVVLKPGQTATEDE----------------IRAFCRDQ-IAHYKIPR 541
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
++ + P+T TGK+++ +R + L
Sbjct: 542 -YIRFVDEMPMTITGKVQKFVMRERMTKELN 571
>gi|390463546|ref|XP_002748483.2| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member
2, mitochondrial [Callithrix jacchus]
Length = 704
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 187/404 (46%), Gaps = 72/404 (17%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-----------APLCH- 117
I FTSGTTGSPKG +SH ++ S +++G + + LH +PL H
Sbjct: 349 IQFTSGTTGSPKGATLSHYNIVNNS----SLIG---ERLKLHEKTPENLRMVLPSPLYHC 401
Query: 118 IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
+G + M LM GA + P F K ALEA+ L P + D+ +
Sbjct: 402 LGSVGGTMVCLMYGATLILSSPIFNGKKALEAISTERGCFLYGTPTMFVDILN----QPN 457
Query: 177 WKGRDSVKKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 233
+ D + + G G P EL++ + +L+SAYG TE +S +TFM+ + T+
Sbjct: 458 FSSYD-ISTVYGGVIAGSPAPPELIRAIIDKINMKELVSAYGTTE-NSPVTFMSFPEDTV 515
Query: 234 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAH 287
E + VG+ PH E ++ + + + G + RG
Sbjct: 516 EQKAE-------------------SVGRVMPHTEARIMNMEAGTLAELNTPGELFIRGYC 556
Query: 288 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 347
VML YW + V + W TGDI +D+ G +VGR I GGEN+YP E+E
Sbjct: 557 VMLGYWGEPQKTEEVVGQDKWYRTGDIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELED 616
Query: 348 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 407
HP + + VVG+ + R+ E + AC+RL KN E E+ +
Sbjct: 617 FFHTHPKVQEVQVVGVKDYRMGEEICACIRL---------------KNGEKTTPEEI-KA 660
Query: 408 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
C+ K ++ FK PR ++++ +PLT +GK+++ ++R ++ HL
Sbjct: 661 FCKGK-ISHFKIPR-YIVFVTDYPLTVSGKVQKFKLREQMERHL 702
>gi|228928086|ref|ZP_04091130.1| AMP-dependent synthetase and ligase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228831503|gb|EEM77096.1| AMP-dependent synthetase and ligase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 522
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 193/389 (49%), Gaps = 50/389 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
I +TSGTTG+PKGV+++H A +VQS I + + DV++ +APL HI G++ M
Sbjct: 173 ILYTSGTTGTPKGVMVTHRA-VVQSARTIGTELHCTQKDVFIISAPLFHIFGMAINMLCA 231
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ +G + KF+ + L+ +EQ VT VP + L K S++ L
Sbjct: 232 VAMGGRIILQEKFQPRETLQLIEQEKVTIQKGVPTMFIKELELEDFDKY--NLSSLRAGL 289
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G +P++ + E L ++G+TET S MT YD T + N+T
Sbjct: 290 VGAAPIPAKTVTEIRERM-GINLCQSFGITETVS--ITMTSYDDTKQ----------NIT 336
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSV 302
+GK P V +K+ + S VG I +G VM Y++ V
Sbjct: 337 ET---------LGKAIPGVTMKIVDENRVALPSGEVGEIAVKGFGVMKGYYNMPEQTNQV 387
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ W +GD+G++D G + VGR+ I GG NVYP+E+EAV+++HP +I V+G
Sbjct: 388 LDNDGWYYSGDLGTLDSQGYLRFVGRKKEMIIRGGLNVYPQEIEAVIMKHPKVIEAAVIG 447
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + L E+ A +RL+ + +E E ++ + +EK + +K P
Sbjct: 448 LPDKVLGEVACAVIRLKNGEESTE----------------EEIKLYLKEK-MAIYKLPEK 490
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
V++ FP+T++GKI++ ++ +V S++
Sbjct: 491 -VIFTDEFPVTASGKIQKLRLKEQVSSNI 518
>gi|167628230|ref|YP_001678729.1| long chain fatty acid acyl-coa ligase [Heliobacterium modesticaldum
Ice1]
gi|167590970|gb|ABZ82718.1| long chain fatty acid acyl-coa ligase [Heliobacterium modesticaldum
Ice1]
Length = 558
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 183/388 (47%), Gaps = 49/388 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMV 130
+TSGTTG PKGV++SH+ +I + + +D PL H G + S++A +
Sbjct: 201 YTSGTTGFPKGVMLSHANIINNANMVADCQKWTHEDRLCFPVPLFHCFGCVMSSLACVCK 260
Query: 131 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
GA V + F +K LEAV++ T L VP + +A L S++ + G
Sbjct: 261 GATMVPLEYFTAKGVLEAVQRERCTVLYGVPTMF--IAELDHPDFDKYDLSSLRTGIMAG 318
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P E+M++ + ++ AYG TE S +T T D +LE
Sbjct: 319 SPCPIEVMRKVIDRMGIGEITIAYGQTEFSPVIT-QTRTDDSLE---------------- 361
Query: 251 VHQPQGVC-VGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 303
+ VC VGK PHVE+K+ + G + RG M Y++ A +
Sbjct: 362 ----RRVCTVGKALPHVEVKIVHPDTGLEIPRGTQGELCARGFGTMKGYYNNPEATEAAI 417
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
E WL TGD+ ++D+ G + GR I GGEN+YP EVE L HP + + VVG+
Sbjct: 418 DAEGWLHTGDLATMDEEGYCRITGRAKDMIIRGGENIYPREVEEFLFTHPKVKDVQVVGV 477
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E +AC+ L++ + +E E +R CR K ++ +K P+ +
Sbjct: 478 PDPKYGEEALACIILKDGEEATE----------------EEIRYFCRGK-ISRYKIPK-Y 519
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHL 451
V + FP+T++GKI++ ++R + L
Sbjct: 520 VRFVDHFPMTASGKIQKFKLREIFIKEL 547
>gi|386358405|ref|YP_006056651.1| acyl-CoA synthetase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365808913|gb|AEW97129.1| acyl-CoA synthetase [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 570
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/389 (31%), Positives = 176/389 (45%), Gaps = 55/389 (14%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MA 126
V I +TSGTTG PKG +SH ++ ++GY E D P H G+ +A
Sbjct: 211 VNIQYTSGTTGFPKGATLSHRNILNNGYFVGELLGYTEADRVCLPVPFYHCFGMVMGNLA 270
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--S 182
GAC V P F+ + L AV T+L VP + +A+L + G D S
Sbjct: 271 ATSHGACVVIPAPVFDPAATLRAVRDEGCTALYGVPTMFIAELGL-----PDFAGYDLSS 325
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 326 LRTGIMAGSPCPVEVMKRVVGEMHMAEVAICYGMTETSP-VSTQTRRDDDLER------- 377
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQF 296
+ VG+ PH+E++V + G + TRG VML YW+
Sbjct: 378 ------------RTATVGRVLPHLEVRVADPVTGETVPRGVPGELRTRGYSVMLGYWEDP 425
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
V G+ W+ TGD+ + + G + + GR I GGENVYP E+E L HP I
Sbjct: 426 ERTAEVIDGDGWMHTGDLAVMREDGYLTITGRIKDMIIRGGENVYPREIEEFLHTHPKIA 485
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ VVG+ + R E V+ACV R+ + E + HCR + L
Sbjct: 486 DVQVVGVPDERYGEEVLACVIPRDPADPP---------------TLEEVTAHCRGR-LAH 529
Query: 417 FKAPRLFVLW-RKPFPLTSTGKIRRDEVR 444
FK PRL LW FP+T +GK+R+ E+R
Sbjct: 530 FKIPRL--LWVLDSFPMTVSGKVRKVELR 556
>gi|296169603|ref|ZP_06851223.1| acyl-CoA synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895869|gb|EFG75564.1| acyl-CoA synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 467
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 182/403 (45%), Gaps = 55/403 (13%)
Query: 43 LTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVG 102
L +D L G + PF + + + + FTSGTTG PKG +++H + +
Sbjct: 119 LKSDFLSGGA----PFERAVSGDDIADVIFTSGTTGRPKGAMMNHRQTLRMYEEWATLAD 174
Query: 103 YGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 161
E D YL P H GL + + + GA + +P F+ ++ +E+ VT L P
Sbjct: 175 LREGDRYLQVNPYFHTFGLKAGLVTSFLRGATMLPVPVFDVGEVVDLIERERVTMLPGPP 234
Query: 162 AIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 221
+ L T+ K S++ + G +P EL++ P L++ YG+TE +
Sbjct: 235 TLYHSLLTVPDKAKL----SSLRAGVTGAADIPVELVRRIHGELPFQTLMTGYGLTEAGN 290
Query: 222 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRI 281
TL PG +F +V + G P VE+++ DG +
Sbjct: 291 V---------TLSRPGD---SFEDVATTA---------GLPCDGVEVRIADDGE-----V 324
Query: 282 LTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 341
L RG VM Y D + + WL TGD+G++DD G + +VGR+ GG N Y
Sbjct: 325 LVRGYGVMQGYLDDPEGTAAAIDADGWLHTGDLGNLDDAGRLRIVGRKKDMFIVGGFNAY 384
Query: 342 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLS 401
P E+E L+ HP + V+G+ + RL ++ A V +++ ++
Sbjct: 385 PAEIEGFLMHHPAVAQAAVIGVPDERLGQVGKAFVVAKDA------------------VT 426
Query: 402 SEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+E L CRE+ + GFK PR V + PL +TGK+ +D +R
Sbjct: 427 AEELIAWCRER-MAGFKVPR-SVEFLDVLPLNATGKVVKDLLR 467
>gi|444379507|ref|ZP_21178686.1| Long-chain-fatty-acid--CoA ligase [Enterovibrio sp. AK16]
gi|443676381|gb|ELT83083.1| Long-chain-fatty-acid--CoA ligase [Enterovibrio sp. AK16]
Length = 516
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 189/377 (50%), Gaps = 40/377 (10%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG +SH+ ++ ++A ++ D + PL H G + M A
Sbjct: 167 VILYTSGTTGQPKGAELSHTNMMTNAMASQNLMRLEYSDTTMAALPLFHSFGQTVMMNAS 226
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL--ATLIRVKKTWKGRDSVKK 185
++ GA V +P+FE S +E + + VT VP + L A+ +K K R S++
Sbjct: 227 ILTGATVVLVPRFEPASVIEQIIEQRVTVFAGVPTMYIALQRASEACAEKAEKVRQSLRL 286
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
++GG LP E++++ +F + ++ YG++ET+ TF + L
Sbjct: 287 GISGGASLPVEVLRQFEAAF-ELPILEGYGLSETAPVATFNHIDSDRL------------ 333
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 305
P SV QP +C G ++L S + G + + VM Y+++ A
Sbjct: 334 --PGSVGQP--LC-GHMIKIIDLAGNSVPTGERGEVCIKSPSVMKGYYNRPEATEETFV- 387
Query: 306 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 365
+ W +GDIG +D+ N+++V R I GG NVYP E+E V++ HP I + VVG +
Sbjct: 388 DGWFKSGDIGYLDEHCNLFIVDRVKDMILRGGYNVYPREIEEVMMCHPAIEMVAVVGEPH 447
Query: 366 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 425
RL E + A V L++ + E+ +E++ C+E+ L +K PR V+
Sbjct: 448 ERLGEEIHAHVLLKQ--------------DAEVCEEAEIIAW-CKEQ-LADYKYPRR-VI 490
Query: 426 WRKPFPLTSTGKI-RRD 441
R FP+T+TGKI +RD
Sbjct: 491 IRSSFPMTATGKILKRD 507
>gi|217969185|ref|YP_002354419.1| AMP-binding domain-containing protein [Thauera sp. MZ1T]
gi|217506512|gb|ACK53523.1| AMP-dependent synthetase and ligase [Thauera sp. MZ1T]
Length = 576
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 202/449 (44%), Gaps = 57/449 (12%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLP----FTHSWAPEGAVII 70
L+ +PSL + +G+ S + D D+L+ S L + + + I
Sbjct: 165 LRSHRLPSLEMVIRMGAEKSPGMMSFD----DLLRAPSREELTALAVLSEKLQFDDPINI 220
Query: 71 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLM 129
FTSGTTG PKG +SH ++ + D PL H G+ + L
Sbjct: 221 QFTSGTTGHPKGATLSHHNILNNGFFVGEAIKLMPGDRLCIPVPLYHCFGMVMGNLGCLT 280
Query: 130 VGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
GA V+ + FE + LE V Q T L VP + +A L + S++ +
Sbjct: 281 HGATMVYPGEAFEPLAVLETVAQEKCTGLYGVPTMF--IAALDHPRFAEFDLSSLRTGIM 338
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G P E+MK +++ AYGMTETS P +F + T
Sbjct: 339 AGSPCPIEVMKRVIGKMNMSEVTIAYGMTETS-------------------PVSFQSGTD 379
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWD-QFLAKPSV 302
+ + + + VG+ PH+E+K+ + V G + TRG VML YWD + K ++
Sbjct: 380 DPIDR-RVSTVGRIQPHLEVKIVDNEGRIVPRGQSGELCTRGYSVMLGYWDDEARTKEAI 438
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
G W+ TGD+ IDD G +VGR + GGEN+YP E+E L HP ++ + VVG
Sbjct: 439 DAGG-WMHTGDLAVIDDEGYCNIVGRIKDMVIRGGENIYPREIEEFLYAHPKVLDVQVVG 497
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + + E + A + RE + +E +R++C+ + + +K PR
Sbjct: 498 IPDQKFGEELCAWIIPREGERLTEDE----------------VREYCKGQ-IAHYKIPR- 539
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
++ + FP+T TGKI++ +R+ + L
Sbjct: 540 YIRFVDSFPMTVTGKIQKFLIRQRMKEEL 568
>gi|403279576|ref|XP_003931323.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 3 [Saimiri boliviensis boliviensis]
Length = 572
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 196/415 (47%), Gaps = 59/415 (14%)
Query: 53 LRSLPFTHSW-APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLH 111
L L +T + + + I FTSGTTGSPKG +SH ++ S+ ++G + + LH
Sbjct: 199 LDQLQYTQQFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSI----LIG---ERLKLH 251
Query: 112 T-----------APLCH-IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLI 158
PL H +G + M LM GA + P F K ALEA+ + L
Sbjct: 252 EKTPEKLRIVLPCPLYHCLGSVGGTMVCLMFGATLILSSPIFNGKKALEAISRERGGFLY 311
Query: 159 TVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGM 216
P + D+ + + D S+ GG + EL++ N +L AYG
Sbjct: 312 GTPTMYVDILN----QPDFSSYDISSMYGGTIGGSPVAPELVRAIMNKLNMKELTVAYGT 367
Query: 217 TETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS 276
TE +S +TFM L + T+E Q ++ G + P++ + + GK A EL
Sbjct: 368 TE-NSPVTFMCLPEDTVE---QKAESVGRIMPHTEARIMNMEAGKLA---ELNT------ 414
Query: 277 HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSG 336
G + RG VML YW + V + W TGDI +D+ G +VGR I G
Sbjct: 415 -PGELFIRGYCVMLGYWGEPRKTEEVVDQDKWYRTGDIAMMDEQGFCKIVGRSKDMIIRG 473
Query: 337 GENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 396
GEN+YP E+E L HP + + VVG+ + R+ E + AC+RL+ +
Sbjct: 474 GENIYPVELEDFLHTHPKVQEVQVVGVKDDRMGEEICACIRLKSGEES------------ 521
Query: 397 ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ E ++ C+ K ++ FK PR ++++ +PLT +GK+++ ++R ++ HL
Sbjct: 522 ----TPEEIKAFCKGK-ISHFKIPR-YIVFVTEYPLTISGKVQKFKLREQMERHL 570
>gi|289746287|ref|ZP_06505665.1| substrate-CoA ligase [Mycobacterium tuberculosis 02_1987]
gi|289686815|gb|EFD54303.1| substrate-CoA ligase [Mycobacterium tuberculosis 02_1987]
Length = 547
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 179/394 (45%), Gaps = 49/394 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMA 126
V I +TSGTT PKGV +SH ++ ++GY D P H G + +A
Sbjct: 191 VNIQYTSGTTAYPKGVTLSHRNILNNGYLVGELLGYTAQDRICIPVPFYHCFGMVMGNLA 250
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
GA V P F+ + L AV+ TSL VP + +A L T S++
Sbjct: 251 ATSHGAAMVIPAPGFDPAATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRT 308
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+M++ + + YGMTETS P +
Sbjct: 309 GIMAGAACPVEVMRKVISRMHMPGVSICYGMTETS-------------------PVSTQT 349
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAK 299
+SV + G VG+ PH+E+KV + VG TRG VM YW+
Sbjct: 350 RADDSVDRRVGT-VGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKT 408
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
V + W+ TGD+ +D G V + GR + GGEN+ P E+E +L HP I+
Sbjct: 409 AEVIDADGWMHTGDLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGH 468
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+G+ +A+ E ++A V+LR N L+ E LR++C + + FK
Sbjct: 469 VIGVPDAKYGEELMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKI 512
Query: 420 PRLFVLW-RKPFPLTSTGKIRRDEVRREVMSHLK 452
PR LW FP+T TGK+R+ E+R++ + +L+
Sbjct: 513 PRY--LWIVDEFPMTVTGKVRKVEMRQQALEYLR 544
>gi|56462785|gb|AAV91588.1| feruloyl-CoA synthetase [Rhodococcus opacus PD630]
Length = 506
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 179/384 (46%), Gaps = 40/384 (10%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-M 127
++ ++SGTTG+PKGV++SH ++ +L ++ + L APL HIGG+ A+
Sbjct: 162 VLMYSSGTTGAPKGVMLSHGNMLWNALNQLLAQDMTSKERTLSVAPLFHIGGIGGAVTPT 221
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
L+ G V + KF++ L+ +E+ +T+ VP ++ +L R S++ I
Sbjct: 222 LLNGGTVVLLRKFDAGVVLDTIEKERITTFFAVPTMIQELWHHPRFADA--DLSSLRAIC 279
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G LP L+ + + AYG+TET+ S+T ++ D + + F T
Sbjct: 280 VAGAPLPEALISPWQDR--DVAITQAYGLTETAPSVTMLSSADVRSKIGSAGKRTF--FT 335
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
V +P G PH +G I+ +G +VML Y +Q A +
Sbjct: 336 DVDVVRPDGSSA---EPH-----------EIGEIVAKGPNVMLGYLNQPEATARTIV-DG 380
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
WL TGD G DD G +++ R SGGENVYP EVEA LL+ GI V+G+ + +
Sbjct: 381 WLHTGDAGYFDDEGFLFICDRYKDMYISGGENVYPAEVEAALLRLEGIREAAVIGVPHEK 440
Query: 368 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 427
W E+ L E +R REK L GFK P F+
Sbjct: 441 ----------------WGETGMAFVVAADGTTLDEETVRARLREK-LAGFKIP-TFIQIA 482
Query: 428 KPFPLTSTGKIRRDEVRREVMSHL 451
+ P T+TGKIR+ ++R+ S L
Sbjct: 483 EALPRTATGKIRKPDLRKLAASRL 506
>gi|433642703|ref|YP_007288462.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070008]
gi|432159251|emb|CCK56555.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070008]
Length = 547
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 179/394 (45%), Gaps = 49/394 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMA 126
V I +TSGTT PKGV +SH ++ ++GY D P H G + +A
Sbjct: 191 VNIQYTSGTTAYPKGVTLSHRNILNNGYLVGELLGYTAQDRICIPVPFYHCFGMVMGNLA 250
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
GA V P F+ + L AV+ TSL VP + +A L T S++
Sbjct: 251 ATSHGAAMVIPAPGFDPAATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRT 308
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+M++ + + YGMTETS P +
Sbjct: 309 GIMAGAACPVEVMRKVISRMHMPGVSICYGMTETS-------------------PVSTQT 349
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAK 299
+SV + G VG+ PH+E+KV + VG TRG VM YW+
Sbjct: 350 RADDSVDRRVGT-VGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKT 408
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
V + W+ TGD+ +D G V + GR + GGEN+ P E+E +L HP I+
Sbjct: 409 AEVIDADGWMHTGDLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGH 468
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+G+ +A+ E ++A V+LR N L+ E LR++C + + FK
Sbjct: 469 VIGVPDAKYGEELMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKI 512
Query: 420 PRLFVLW-RKPFPLTSTGKIRRDEVRREVMSHLK 452
PR LW FP+T TGK+R+ E+R++ + +L+
Sbjct: 513 PRY--LWIVDEFPMTVTGKVRKVEMRQQALEYLR 544
>gi|320450973|ref|YP_004203069.1| long-chain-fatty-acid--CoA ligase [Thermus scotoductus SA-01]
gi|320151142|gb|ADW22520.1| long-chain-fatty-acid--CoA ligase [Thermus scotoductus SA-01]
Length = 560
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 186/408 (45%), Gaps = 59/408 (14%)
Query: 53 LRSLPFT-HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA-------IVGYG 104
LR P T H PE ++ +T GTTG KG +++H L+ L A ++G G
Sbjct: 192 LRHPPATPHPADPEDLALLQYTGGTTGISKGAMLTHRNLVANVLQIDAWDSTSKELLGKG 251
Query: 105 EDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAI 163
V L P H+ G++ AM + G V +P+ E + +EA+E+H VT VP +
Sbjct: 252 ---VMLGALPFFHVYGMTVAMNYGIYSGYKIVLLPRPEIHAIVEAIEKHQVTHFPGVPTL 308
Query: 164 MADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSL 223
++K + S++ L+G LP E+ K A+LI YG++E S
Sbjct: 309 YVAFNHFPGIEK--RNVKSIRICLSGAAPLPVEVAKR-FEEITGARLIEGYGLSEASPV- 364
Query: 224 TFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV----- 278
T P Q G + S+ G P P V+ KV + V
Sbjct: 365 --------THSNPVQ-----GEIKKGSI--------GMPLPSVDAKVVDEEGKEVPMGEV 403
Query: 279 GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGE 338
G ++ +G ++M YW++ + + + WL TGD+ +D G ++V R+ I +GG
Sbjct: 404 GELVVKGPNIMKGYWNR-PEETQKALKDGWLFTGDMARMDQDGYFYIVDRKKDMIIAGGY 462
Query: 339 NVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKEL 398
N+YP EVE VL QH + VVG+ + E V A + L+E ++ + D
Sbjct: 463 NIYPREVEEVLYQHEAVQEAAVVGVPDPYRGETVAAFLVLKEGYKGKVTEKD-------- 514
Query: 399 LLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
+ CR+ NL +K PR+ + +R P TS GKI R E+R E
Sbjct: 515 ------IEAFCRQ-NLAAYKVPRI-IQFRDSLPKTSVGKILRRELREE 554
>gi|392392571|ref|YP_006429173.1| acyl-CoA synthetase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390523649|gb|AFL99379.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 522
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 195/398 (48%), Gaps = 59/398 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIA--IVGYGEDDVYLHTAPLCHIGGLSSAMAM 127
I FT GTTG KGV+ +H A + Q++ + +G D+V L +PL H GG++ + +
Sbjct: 165 IQFTGGTTGRSKGVMRTHEADLFQTIGVMTSNKMGASSDEVVLTQSPLHHQGGITWMLCV 224
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD----SV 183
+ GA V F+ L +++ VT ++ +P +T +R+ D SV
Sbjct: 225 MATGAQFVICDGFDPVEILRQIQKERVTYMLLLPP-----STYLRLIDAPAFGDYDVSSV 279
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
K + GG ++++ +FP ++ +G TET + T++ T E
Sbjct: 280 KVVHTSAGGTSPAIVQKMVEAFPNCEVYYGWGQTETGAG----TVHRITREM-------- 327
Query: 244 GNVTPNSVHQPQGV-CVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQ-F 296
++H P+ VG+P P +L++ + VG + +G + Y+ Q
Sbjct: 328 ------ALHHPEKTQSVGRPMPFFQLRIVDEAGKDVPQGEVGEGIAKGPAIFSGYYKQPE 381
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
L +++ G W TGD+ D+ G ++V R+ IK+GGENV+ +EVEAV+ +HP ++
Sbjct: 382 LTDETIADG--WTRTGDMMRQDEEGLYYMVDRKKDMIKTGGENVFAQEVEAVIRKHPAVL 439
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
V+G+ + E V+A ++LR + ++E +++HC+ ++L+
Sbjct: 440 DCSVIGVPDKTFGEAVMAVIKLRAGYT----------------AAAEDIQEHCK-RDLSS 482
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVR---REVMSHL 451
+K PR +V + FP+ S GKI++ +R R + HL
Sbjct: 483 YKKPR-YVEFLDEFPVDSAGKIQKFRLRKKYRGIYGHL 519
>gi|385330740|ref|YP_005884691.1| acyl-CoA synthase [Marinobacter adhaerens HP15]
gi|311693890|gb|ADP96763.1| acyl-CoA synthase [Marinobacter adhaerens HP15]
Length = 548
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 180/384 (46%), Gaps = 47/384 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I FTSGTTG+PKG ++H ++ E D + PL H G + + +
Sbjct: 194 IQFTSGTTGNPKGATLTHHNILNNGYFVGESQLLTEKDRLVIPVPLYHCFGMVMGNLGCI 253
Query: 129 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ + FE KS L+AV Q T+L VP + +A L + S++ +
Sbjct: 254 THGSTMIYPGEGFEPKSVLQAVHQEKATALYGVPTMF--IAELAEPEFETYDLSSLRTGI 311
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P+E+MK+ ++ AYGMTETS T + DP
Sbjct: 312 MAGSICPAEVMKKVNGKMNMKEVQIAYGMTETSPVSTQTSSLDP---------------- 355
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ Q VG+ PH+E K+ G+ +V G + TRG VML+YW+
Sbjct: 356 ----FEKQVTTVGRTQPHLETKIVDPGTGNVVPRGEIGELCTRGYSVMLKYWNNEEKTRE 411
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ ++D+ G V +VGR + GGEN+YP+E+E L HP I + V
Sbjct: 412 AIDSAGWMHTGDLATMDEEGYVQIVGRIKDMVIRGGENIYPKEIEEFLYTHPAIEEVQVT 471
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI + + E ++A V+L D + +++E L+ C+ K + FK P+
Sbjct: 472 GIPDDKYGEELIAWVKLAP---------DAAP------VTAEDLQAFCKGK-IAHFKIPK 515
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRR 445
+ + FP+T TGKI++ ++R
Sbjct: 516 NYKFVDE-FPMTVTGKIQKFKMRE 538
>gi|56420133|ref|YP_147451.1| AMP-binding protein [Geobacillus kaustophilus HTA426]
gi|375008623|ref|YP_004982256.1| acyl-CoA synthetase yngI [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56379975|dbj|BAD75883.1| fatty-acid-CoA ligase [Geobacillus kaustophilus HTA426]
gi|359287472|gb|AEV19156.1| acyl-CoA synthetase yngI [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 544
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 181/392 (46%), Gaps = 47/392 (11%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-I 118
S P + + +TSGTTG PKGV+++H ++ + +G GE D P H
Sbjct: 182 ESLDPHDVINMQYTSGTTGFPKGVMLTHYNIVNNAHQVAQCMGLGEGDRLCIPVPFFHCF 241
Query: 119 GGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
G + S +A + VGA V + +F K LE VE T+L VP + +A L
Sbjct: 242 GCVMSTLACVTVGATMVPVVEFHPKRVLETVEAERCTALHGVPTMF--IAELNDPDFAKY 299
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
S++ + G P E+MK + AYG TE S +T DP LE +
Sbjct: 300 DLSSLRTGIMAGSPCPVEVMKAVIEKMGMKDITIAYGQTEASPVITQTRTDDP-LELRVE 358
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRY 292
VG+ P VE+K+ G++ G + TRG HVM Y
Sbjct: 359 -------------------TVGRALPGVEVKIVEPGTNKEVPPGVQGELCTRGYHVMKGY 399
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
++ A + WL TGD+ ++D+ G + GR I GGEN+YP E+E L +H
Sbjct: 400 YNNPEATNEAIDQDGWLHTGDLATMDENGYFRITGRLKDMIIRGGENIYPREIEEFLYKH 459
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P I+ + VVG+ + E V+A + L++ ++E +R+ CR
Sbjct: 460 PKILDVQVVGVPDEVYGEEVMAWIILKDGET----------------ATAEEIREFCR-G 502
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+++ K PR ++ + +P+T++GKI++ ++R
Sbjct: 503 HISRHKIPR-YIEFTDSYPMTASGKIQKFKLR 533
>gi|117920918|ref|YP_870110.1| AMP-binding protein [Shewanella sp. ANA-3]
gi|117613250|gb|ABK48704.1| succinate dehydrogenase, cytochrome b subunit [Shewanella sp.
ANA-3]
Length = 574
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 196/445 (44%), Gaps = 47/445 (10%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
+LQ A+P L++ + +G+ S + D L ++ S +P A+ I FT
Sbjct: 164 QLQAKALPDLQFVIRMGAEQSPGMLNFDDLLVEVTADDKAALERIAESLSPYDAINIQFT 223
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGA 132
SGTTGSPKG +SH ++ + + +D PL H G+ + L GA
Sbjct: 224 SGTTGSPKGATLSHHNILNNGYLVAEAMKFTCEDKLCIPVPLYHCFGMVLGNLVCLAKGA 283
Query: 133 CHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
VF F+ + LE VE+ T+L VP + +A L + S++ + G
Sbjct: 284 AAVFPGDSFDPLTTLEVVERERCTALHGVPTMF--IAELEHPEFKRFDLSSLRTGVMAGA 341
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P E+M+ N +++ YG TE S L +T D +E
Sbjct: 342 TCPEEVMRRVQNLMYMQEVLIGYGQTE-CSPLNHITEIDSPVEK---------------- 384
Query: 252 HQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGE 306
+ + VG+ PH E+K+ + + G + +RG +M YW+ + E
Sbjct: 385 ---RVLTVGRALPHTEVKIVDEFGEVLPINTPGEVCSRGYCIMQCYWNDPEKTAATIDSE 441
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
WL +GDIG +D+ G V +VGR I GGEN+YP E+E L H + V G+ +
Sbjct: 442 GWLHSGDIGQMDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVHSD 501
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E V A +++R SE E +R EK FK PR ++ +
Sbjct: 502 KYGEEVCAWIKIRSGATISE----------------EDIRHFLTEK-FAYFKVPR-YIKF 543
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHL 451
+ +P+T TGKI++ ++R + L
Sbjct: 544 VEQYPMTVTGKIQKFKMRELMYQEL 568
>gi|402850383|ref|ZP_10898585.1| Long-chain-fatty-acid--CoA ligase [Rhodovulum sp. PH10]
gi|402499331|gb|EJW11041.1| Long-chain-fatty-acid--CoA ligase [Rhodovulum sp. PH10]
Length = 509
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 180/383 (46%), Gaps = 46/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
I +T GTTG KGV++SH+ L +L IA G+ E VYLH+ PL H+ S
Sbjct: 163 IFYTGGTTGPAKGVMLSHANLYANALHGIAQFGGHDERTVYLHSGPLYHLAAGSRVFTTT 222
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKI 186
++GA HV IP+F + L+A++ H VT VP ++A +I ++ D S+ +
Sbjct: 223 ILGATHVVIPRFTVEGVLDAIKTHRVTMTAMVPTMLA----MILSHPAFEHADLSSLSFL 278
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
+ GG +P L+ EA P + YGMTE S + T++ +L+
Sbjct: 279 VYGGSPMPEALIVEAMRRLPHVRFGQGYGMTELSPACTYLEPRHHSLD------------ 326
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPS 301
P H+ + VG+PA V++++ + + VG I G VM YW + A
Sbjct: 327 -PALRHRLR--SVGRPAMGVDIRILDEAGHDRPTGEVGEIAVAGPIVMQGYWKRPDATRE 383
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
V V + TGD+G +D G +++V R I +GGE V+ EVE V+ +HP + VV
Sbjct: 384 VLRDGV-MHTGDLGYLDRDGFLYIVDRLKDMIVTGGEKVFCIEVEDVMRKHPAVALCAVV 442
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G R W E+ ++++ + HCR +L G+K PR
Sbjct: 443 G----------------RPHPIWGEAVHGVVVPRPGASVTADEIVAHCR-AHLAGYKVPR 485
Query: 422 LFVLWRKPFPLTSTGKIRRDEVR 444
+ +R PL+ KI + +R
Sbjct: 486 -SIEFRTAMPLSGANKILKTVLR 507
>gi|15609642|ref|NP_217021.1| Probable fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium tuberculosis
H37Rv]
gi|15842033|ref|NP_337070.1| AMP-binding protein [Mycobacterium tuberculosis CDC1551]
gi|31793685|ref|NP_856178.1| AMP-binding protein [Mycobacterium bovis AF2122/97]
gi|148662341|ref|YP_001283864.1| AMP-binding protein [Mycobacterium tuberculosis H37Ra]
gi|148823702|ref|YP_001288456.1| AMP-binding domain protein [Mycobacterium tuberculosis F11]
gi|167967650|ref|ZP_02549927.1| acyl-CoA synthetase [Mycobacterium tuberculosis H37Ra]
gi|253798415|ref|YP_003031416.1| AMP-binding protein [Mycobacterium tuberculosis KZN 1435]
gi|254232634|ref|ZP_04925961.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis C]
gi|254366808|ref|ZP_04982850.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis str.
Haarlem]
gi|254551552|ref|ZP_05141999.1| AMP-binding domain protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289444036|ref|ZP_06433780.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T46]
gi|289570665|ref|ZP_06450892.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T17]
gi|289575210|ref|ZP_06455437.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis K85]
gi|289751114|ref|ZP_06510492.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T92]
gi|289754614|ref|ZP_06513992.1| substrate-CoA ligase [Mycobacterium tuberculosis EAS054]
gi|289758637|ref|ZP_06518015.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis T85]
gi|289762673|ref|ZP_06522051.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis GM 1503]
gi|294994388|ref|ZP_06800079.1| AMP-binding domain protein [Mycobacterium tuberculosis 210]
gi|297635113|ref|ZP_06952893.1| AMP-binding domain protein [Mycobacterium tuberculosis KZN 4207]
gi|297732104|ref|ZP_06961222.1| AMP-binding domain protein [Mycobacterium tuberculosis KZN R506]
gi|298525977|ref|ZP_07013386.1| acyl-CoA synthetase [Mycobacterium tuberculosis 94_M4241A]
gi|306776778|ref|ZP_07415115.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu001]
gi|306780544|ref|ZP_07418881.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu002]
gi|306785305|ref|ZP_07423627.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu003]
gi|306789659|ref|ZP_07427981.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu004]
gi|306793986|ref|ZP_07432288.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu005]
gi|306798381|ref|ZP_07436683.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu006]
gi|306804261|ref|ZP_07440929.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu008]
gi|306807698|ref|ZP_07444366.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu007]
gi|306968658|ref|ZP_07481319.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu009]
gi|306972889|ref|ZP_07485550.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu010]
gi|307080602|ref|ZP_07489772.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu011]
gi|307085188|ref|ZP_07494301.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu012]
gi|313659438|ref|ZP_07816318.1| AMP-binding domain protein [Mycobacterium tuberculosis KZN V2475]
gi|339632531|ref|YP_004724173.1| fatty-acid-CoA ligase [Mycobacterium africanum GM041182]
gi|340627519|ref|YP_004745971.1| putative fatty-acid-CoA ligase FADD35 [Mycobacterium canettii CIPT
140010059]
gi|375295678|ref|YP_005099945.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis KZN 4207]
gi|385991815|ref|YP_005910113.1| AMP-binding protein [Mycobacterium tuberculosis CCDC5180]
gi|385995434|ref|YP_005913732.1| AMP-binding protein [Mycobacterium tuberculosis CCDC5079]
gi|385999285|ref|YP_005917584.1| AMP-binding protein [Mycobacterium tuberculosis CTRI-2]
gi|392387143|ref|YP_005308772.1| fadD35 [Mycobacterium tuberculosis UT205]
gi|392431886|ref|YP_006472930.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis KZN 605]
gi|397674409|ref|YP_006515944.1| fatty-acyl-CoA synthase [Mycobacterium tuberculosis H37Rv]
gi|422813553|ref|ZP_16861925.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CDC1551A]
gi|424804843|ref|ZP_18230274.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis W-148]
gi|424948174|ref|ZP_18363870.1| acyl-CoA synthetase [Mycobacterium tuberculosis NCGM2209]
gi|433627640|ref|YP_007261269.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140060008]
gi|13882311|gb|AAK46884.1| substrate--CoA ligase [Mycobacterium tuberculosis CDC1551]
gi|31619278|emb|CAD97394.1| PROBABLE FATTY-ACID-COA LIGASE FADD35 (FATTY-ACID-COA SYNTHETASE)
(FATTY-ACID-COA SYNTHASE) [Mycobacterium bovis
AF2122/97]
gi|124601693|gb|EAY60703.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis C]
gi|134152318|gb|EBA44363.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis str.
Haarlem]
gi|148506493|gb|ABQ74302.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis H37Ra]
gi|148722229|gb|ABR06854.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis F11]
gi|253319918|gb|ACT24521.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis KZN 1435]
gi|289416955|gb|EFD14195.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T46]
gi|289539641|gb|EFD44219.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis K85]
gi|289544419|gb|EFD48067.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T17]
gi|289691701|gb|EFD59130.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T92]
gi|289695201|gb|EFD62630.1| substrate-CoA ligase [Mycobacterium tuberculosis EAS054]
gi|289710179|gb|EFD74195.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis GM 1503]
gi|289714201|gb|EFD78213.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis T85]
gi|298495771|gb|EFI31065.1| acyl-CoA synthetase [Mycobacterium tuberculosis 94_M4241A]
gi|308214839|gb|EFO74238.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu001]
gi|308326610|gb|EFP15461.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu002]
gi|308330032|gb|EFP18883.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu003]
gi|308333876|gb|EFP22727.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu004]
gi|308337676|gb|EFP26527.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu005]
gi|308341357|gb|EFP30208.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu006]
gi|308345886|gb|EFP34737.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu007]
gi|308349149|gb|EFP38000.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu008]
gi|308353773|gb|EFP42624.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu009]
gi|308357716|gb|EFP46567.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu010]
gi|308361656|gb|EFP50507.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu011]
gi|308365268|gb|EFP54119.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu012]
gi|323718913|gb|EGB28067.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CDC1551A]
gi|326904119|gb|EGE51052.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis W-148]
gi|328458183|gb|AEB03606.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis KZN 4207]
gi|339295388|gb|AEJ47499.1| AMP-binding domain protein [Mycobacterium tuberculosis CCDC5079]
gi|339299008|gb|AEJ51118.1| AMP-binding domain protein [Mycobacterium tuberculosis CCDC5180]
gi|339331887|emb|CCC27590.1| putative fatty-acid-CoA ligase FADD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium africanum
GM041182]
gi|340005709|emb|CCC44875.1| putative fatty-acid-CoA ligase FADD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140010059]
gi|344220332|gb|AEN00963.1| AMP-binding domain protein [Mycobacterium tuberculosis CTRI-2]
gi|358232689|dbj|GAA46181.1| acyl-CoA synthetase [Mycobacterium tuberculosis NCGM2209]
gi|378545694|emb|CCE37972.1| fadD35 [Mycobacterium tuberculosis UT205]
gi|379028808|dbj|BAL66541.1| acyl-CoA synthetase [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
gi|392053295|gb|AFM48853.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis KZN 605]
gi|395139314|gb|AFN50473.1| fatty-acyl-CoA synthase [Mycobacterium tuberculosis H37Rv]
gi|432155246|emb|CCK52492.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140060008]
gi|440581981|emb|CCG12384.1| putative FATTY-ACID-CoA LIGASE FADD35 (FATTY-ACID-CoA SYNTHETASE)
(FATTY-ACID-CoA SYNTHASE) [Mycobacterium tuberculosis
7199-99]
gi|444896038|emb|CCP45299.1| Probable fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium tuberculosis
H37Rv]
Length = 547
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 179/394 (45%), Gaps = 49/394 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMA 126
V I +TSGTT PKGV +SH ++ ++GY D P H G + +A
Sbjct: 191 VNIQYTSGTTAYPKGVTLSHRNILNNGYLVGELLGYTAQDRICIPVPFYHCFGMVMGNLA 250
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
GA V P F+ + L AV+ TSL VP + +A L T S++
Sbjct: 251 ATSHGAAMVIPAPGFDPAATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRT 308
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+M++ + + YGMTETS P +
Sbjct: 309 GIMAGAACPVEVMRKVISRMHMPGVSICYGMTETS-------------------PVSTQT 349
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAK 299
+SV + G VG+ PH+E+KV + VG TRG VM YW+
Sbjct: 350 RADDSVDRRVGT-VGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKT 408
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
V + W+ TGD+ +D G V + GR + GGEN+ P E+E +L HP I+
Sbjct: 409 AEVIDADGWMHTGDLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGH 468
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+G+ +A+ E ++A V+LR N L+ E LR++C + + FK
Sbjct: 469 VIGVPDAKYGEELMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKI 512
Query: 420 PRLFVLW-RKPFPLTSTGKIRRDEVRREVMSHLK 452
PR LW FP+T TGK+R+ E+R++ + +L+
Sbjct: 513 PRY--LWIVDEFPMTVTGKVRKVEMRQQALEYLR 544
>gi|121638387|ref|YP_978611.1| AMP-binding protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990881|ref|YP_002645568.1| AMP-binding protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378772241|ref|YP_005171974.1| Fatty-acid-CoA ligase [Mycobacterium bovis BCG str. Mexico]
gi|449064578|ref|YP_007431661.1| AMP-binding domain protein [Mycobacterium bovis BCG str. Korea
1168P]
gi|121494035|emb|CAL72513.1| Probable fatty-acid-CoA ligase fadD35 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773994|dbj|BAH26800.1| acyl-CoA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
gi|341602425|emb|CCC65101.1| probable fatty-acid-CoA ligase fadD35 [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|356594562|gb|AET19791.1| Fatty-acid-CoA ligase [Mycobacterium bovis BCG str. Mexico]
gi|449033086|gb|AGE68513.1| AMP-binding domain protein [Mycobacterium bovis BCG str. Korea
1168P]
Length = 547
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 179/394 (45%), Gaps = 49/394 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMA 126
V I +TSGTT PKGV +SH ++ ++GY D P H G + +A
Sbjct: 191 VNIQYTSGTTAYPKGVTLSHRNILNNGYLVGELLGYTAQDRICIPVPFYHCFGMVMGNLA 250
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
GA V P F+ + L AV+ TSL VP + +A L T S++
Sbjct: 251 ATSHGAAMVIPAPGFDPAATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRT 308
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+M++ + + YGMTETS P +
Sbjct: 309 GIMAGAACPVEVMRKVISRMHMPGVSICYGMTETS-------------------PVSTQT 349
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAK 299
+SV + G VG+ PH+E+KV + VG TRG VM YW+
Sbjct: 350 RADDSVDRRVGT-VGRVGPHLEIKVVDPATGEAVPRGVVGEFCTRGYSVMAGYWNDPQKT 408
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
V + W+ TGD+ +D G V + GR + GGEN+ P E+E +L HP I+
Sbjct: 409 AEVIDADGWMHTGDLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGH 468
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+G+ +A+ E ++A V+LR N L+ E LR++C + + FK
Sbjct: 469 VIGVPDAKYGEELMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKI 512
Query: 420 PRLFVLW-RKPFPLTSTGKIRRDEVRREVMSHLK 452
PR LW FP+T TGK+R+ E+R++ + +L+
Sbjct: 513 PRY--LWIVDEFPMTVTGKVRKVEMRQQALEYLR 544
>gi|403279574|ref|XP_003931322.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 2 [Saimiri boliviensis boliviensis]
Length = 602
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 197/415 (47%), Gaps = 59/415 (14%)
Query: 53 LRSLPFTHSW-APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLH 111
L L +T + + + I FTSGTTGSPKG +SH ++ S+ ++G + + LH
Sbjct: 229 LDQLQYTQQFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSI----LIG---ERLKLH 281
Query: 112 T-----------APLCH-IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLI 158
PL H +G + M LM GA + P F K ALEA+ + L
Sbjct: 282 EKTPEKLRIVLPCPLYHCLGSVGGTMVCLMFGATLILSSPIFNGKKALEAISRERGGFLY 341
Query: 159 TVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGM 216
P + D+ + + D S+ GG + EL++ N +L AYG
Sbjct: 342 GTPTMYVDILN----QPDFSSYDISSMYGGTIGGSPVAPELVRAIMNKLNMKELTVAYGT 397
Query: 217 TETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS 276
TE +S +TFM L + T+E Q ++ G + P++ + + GK A EL
Sbjct: 398 TE-NSPVTFMCLPEDTVE---QKAESVGRIMPHTEARIMNMEAGKLA---ELNT------ 444
Query: 277 HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSG 336
G + RG VML YW + V + W TGDI +D+ G +VGR I G
Sbjct: 445 -PGELFIRGYCVMLGYWGEPRKTEEVVDQDKWYRTGDIAMMDEQGFCKIVGRSKDMIIRG 503
Query: 337 GENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 396
GEN+YP E+E L HP + + VVG+ + R+ E + AC+RL+ ES
Sbjct: 504 GENIYPVELEDFLHTHPKVQEVQVVGVKDDRMGEEICACIRLKSG---EES--------- 551
Query: 397 ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ E ++ C+ K ++ FK PR ++++ +PLT +GK+++ ++R ++ HL
Sbjct: 552 ----TPEEIKAFCKGK-ISHFKIPR-YIVFVTEYPLTISGKVQKFKLREQMERHL 600
>gi|196047047|ref|ZP_03114266.1| putative feruloyl-CoA synthetase [Bacillus cereus 03BB108]
gi|196022151|gb|EDX60839.1| putative feruloyl-CoA synthetase [Bacillus cereus 03BB108]
Length = 496
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 186/390 (47%), Gaps = 54/390 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAM 127
IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 153 IICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTIHDRSIVLLPLFHIGGIGLFAFPT 212
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
L G + KFE AL +E+H VT ++ VP I L + + T SV+
Sbjct: 213 LFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVRWFY 270
Query: 188 NGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 271 NGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS--------- 318
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KP 300
+GKP + ++ + + VG +L RG +VM YW++ A +
Sbjct: 319 ------------IGKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEE 366
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + V
Sbjct: 367 TIQDG--WLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAV 424
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VG + + E+ +A + K+ +L+ +V+ +HCR L +K P
Sbjct: 425 VGRQHVKWGEIPIAFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKYKIP 467
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
+ +++ K P +TGKI++ ++ ++ S
Sbjct: 468 KE-IVFLKELPKNATGKIQKAQLVNQLKSR 496
>gi|167582832|ref|ZP_02375706.1| acyl-CoA synthetase [Burkholderia thailandensis TXDOH]
Length = 576
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 204/445 (45%), Gaps = 49/445 (11%)
Query: 15 LQHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
L +PSLR V++G+++ + ++ D+L R + + I FT
Sbjct: 165 LHAARVPSLRTVVTMGAAAPAGMLSFADVLARGRAALDPARLDAIGAALDCRDPINIQFT 224
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGA 132
SGTTGSPKG ++H ++ + + +++ E D PL H G+ S +A + VGA
Sbjct: 225 SGTTGSPKGATLTHHNVVNNACSIASVMRLTEVDAMCIPVPLYHCFGMVLSVLACVSVGA 284
Query: 133 CHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
VF + FE + L AV T+L VP + +A L +++ + G
Sbjct: 285 KMVFPGEAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGS 342
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P E MK +++ AYGMTETS P +F + T +S+
Sbjct: 343 PCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSSTTDSL 383
Query: 252 HQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGE 306
+ + VG+ PH+E K+ + V G + TRG VML YWD A+ + +
Sbjct: 384 EK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVD 441
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +
Sbjct: 442 GWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDP 501
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E V A + LR ++ LR+ CR + +K PR +V +
Sbjct: 502 KYGEEVCAWIVLRAGETMTDDE----------------LREFCR-GQIAHYKVPR-YVRF 543
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHL 451
P+T TGK+++ +R ++ L
Sbjct: 544 VDELPMTVTGKVQKFVMRERMIDEL 568
>gi|119503808|ref|ZP_01625890.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
gi|119460316|gb|EAW41409.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
Length = 558
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 202/457 (44%), Gaps = 51/457 (11%)
Query: 6 ESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWA 63
E +DS LQ +P LR + +G++ + + + + G LR+L
Sbjct: 144 ELADSKPGALQAQKLPYLRTVIRMGTAETAGMPNFETVCGLGGEKDGDQLRAL--RGQLK 201
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ A+ I FTSGTTG+PKG ++H ++ + E D PL H G+
Sbjct: 202 PDDAINIQFTSGTTGNPKGATLTHCNILNNGYLAGEAMQLTETDRLCIPVPLYHCFGMVL 261
Query: 124 A-MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
A +A + G+ VF + F+ L+ VE T+L VP + + L +
Sbjct: 262 AVLACVSHGSAMVFPGEAFDPLETLQTVEAEGCTALHGVPTMF--ITELDHPRFGEFDLS 319
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P E+MK + ++ YG TE S L MTL
Sbjct: 320 SLRTGIMAGAPCPVEIMKRVISEMHMEDILIGYGQTEVSP-LNHMTL------------- 365
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQF 296
PN + + VG+ P VE+KV + V G I TRG VM YW+
Sbjct: 366 ------PNDSLERRTETVGRAVPWVEIKVIDQSNRVVAIGEKGEICTRGYSVMREYWNDP 419
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
WL +GD+ ++D+ G V +VGR I GGEN+YP EVE L QHP I
Sbjct: 420 ERTAETIDEAGWLHSGDLATMDEEGYVRIVGRIKDMIIRGGENIYPREVEEFLYQHPAIS 479
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ V GI + ++ E V A V+L E +E L+ C ++ +T
Sbjct: 480 EVQVFGIPHEKMGEEVCAWVQLNEGQSMTEDE----------------LKAFCNDQ-ITH 522
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
FK PR V + +P+T TGKI++ +R ++++ L
Sbjct: 523 FKIPR-HVRFVTEYPMTVTGKIQKFVMRDQMVAALNE 558
>gi|424851538|ref|ZP_18275935.1| dicarboxylate-CoA ligase PimA [Rhodococcus opacus PD630]
gi|356666203|gb|EHI46274.1| dicarboxylate-CoA ligase PimA [Rhodococcus opacus PD630]
Length = 546
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 175/388 (45%), Gaps = 47/388 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E+D P H G+ +A
Sbjct: 193 IQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYTENDRVCIPVPFYHCFGMVMGNLACT 252
Query: 129 MVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA V P F+ K+ L+AVE TSL VP + +A L S++ +
Sbjct: 253 SHGATMVIPGPSFDPKATLQAVEAEKCTSLYGVPTMF--IAELAEPDFASFDLSSLRTGI 310
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK+ A++ YGMTETS ++ T D T++
Sbjct: 311 MAGSPCPVEVMKQVIEQMGMAEVSICYGMTETSP-VSLQTRSDDTIDQ------------ 357
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ VG+ PH+E+K+ + G + TRG VML YW+
Sbjct: 358 -------RVSTVGRVGPHLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAE 410
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGDIG +D G V + GR + GGENVYP E+E L HP I+ V+
Sbjct: 411 AIDAGRWMHTGDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVI 470
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ +A+ E ++ VR+++ + L + +R+ C K L +K P+
Sbjct: 471 GVPDAKYGEELMVWVRMKDGAE---------------PLDAAKVREFCTGK-LAHYKIPK 514
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMS 449
+V FP+T TGK+R+ E+R + +
Sbjct: 515 -YVHVVDEFPMTVTGKVRKVEMREQSLD 541
>gi|409391373|ref|ZP_11243058.1| putative acid--CoA ligase [Gordonia rubripertincta NBRC 101908]
gi|403198713|dbj|GAB86292.1| putative acid--CoA ligase [Gordonia rubripertincta NBRC 101908]
Length = 503
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 193/397 (48%), Gaps = 52/397 (13%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
+G ++ +TSGTT PKGV++ HS L+ L + + EDD L + P HI +++
Sbjct: 141 DGPAVVIYTSGTTSEPKGVLLRHSNLVSYVLGSVEFMNADEDDAALVSVPPYHIAAVANV 200
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--- 181
++ L G + + +F+ L+ V VT+ + VP +++ + ++ G D
Sbjct: 201 ISNLYGGRRTIVLEQFDPTQWLDTVRTEGVTNALVVPTMLSRV-----IEAIGDGVDGSV 255
Query: 182 -SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
+++ + GG +P+ ++++A ++P+ ++AYG+TETSS++ + P
Sbjct: 256 PTLRSLAYGGAPMPAAVIEKALLAWPEVGFVNAYGLTETSSTVAVL--------GPEDHR 307
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQ 295
A+ + P+ + + VGK P VE+++ + + + GRI RG V Y
Sbjct: 308 DAYASDEPHI--RARLASVGKVLPTVEIQIRDENGAALPPGAPGRICVRGDQVSAEY--A 363
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
+ + G + DT D G +DD G +++ GR + I G EN+ P E+E VLL+HP +
Sbjct: 364 GIGRAVDDDG--FFDTRDNGYLDDDGYLFIGGRIDDTIIRGAENIAPAEIEEVLLRHPDV 421
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE---K 412
+ + VVG+ + + + A V LR + +E+L RE
Sbjct: 422 LDVAVVGVPDEEWGQRIEAAVVLR--------------------VGAELLDADLREFAQT 461
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 449
+L K P F W + P T TGK+ R V R+V+S
Sbjct: 462 SLRSSKTPDRFWFWPE-LPRTETGKLVRRNVLRKVLS 497
>gi|55981399|ref|YP_144696.1| long-chain fatty acid--CoA ligase [Thermus thermophilus HB8]
gi|55772812|dbj|BAD71253.1| long-chain fatty acid--CoA ligase [Thermus thermophilus HB8]
Length = 548
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 187/386 (48%), Gaps = 50/386 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGE-DDVYLHTAPLCHIGGLSSAMAM-L 128
+T GTTG KG +++H L +L A I + E ++V L P H+ G++ AM + L
Sbjct: 203 YTGGTTGLAKGAMLTHRNLSANALQVRAWIPDFREGEEVVLGAIPFFHVYGMTVAMNLAL 262
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ GA V +P+ E K+ +EA+E+H VT VP + +++ + SV+ ++
Sbjct: 263 LGGAKLVLLPRPEIKAIVEAIEKHQVTLFPGVPTLYVAFNNFPGIER--RDLKSVRACIS 320
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G LP E+ E AKL+ YG+TE S LY G+ + G+
Sbjct: 321 GSAPLPLEVA-ERFERLTGAKLVEGYGLTEASPVTHCNPLY-------GE--RRLGS--- 367
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVS 303
VG P P V+ KV + VG + +G +VM YW++ + +
Sbjct: 368 ----------VGLPFPGVDAKVVDEEGKELPPGEVGELAVKGPNVMKGYWNR-PEETQKT 416
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL QH + VVG+
Sbjct: 417 LKDGWLFTGDLAKMDEDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQEAAVVGV 476
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ E V A + L+ +Q S D + + CR+ NL +K PR+
Sbjct: 477 PDPYRGETVAAFLVLKPEYQGKVSEKD--------------IERFCRQ-NLAAYKVPRI- 520
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMS 449
+ +R+ P +S GKI + E+++EV +
Sbjct: 521 IQFRESLPKSSVGKILKRELQKEVAA 546
>gi|313679822|ref|YP_004057561.1| amp-dependent synthetase and ligase [Oceanithermus profundus DSM
14977]
gi|313152537|gb|ADR36388.1| AMP-dependent synthetase and ligase [Oceanithermus profundus DSM
14977]
Length = 558
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 188/400 (47%), Gaps = 54/400 (13%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE---DDVYLHTA 113
P H + ++ +T GTTG KG +++H LI ++ ++ G+ + V L
Sbjct: 194 PEAHPIETDDLALLQYTGGTTGVSKGAMLTHRNLI-SNVFQVDAWEPGQVWKNGVMLSVI 252
Query: 114 PLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR 172
P H+ G++ +M +M G V +P+FE + A+E+H VT VP + T
Sbjct: 253 PFFHVYGMTVSMNYSVMRGMKMVLLPRFEIAEVVAAIEKHRVTHFPGVPTMYVAFNTFPG 312
Query: 173 VKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT 232
++K + ++K L+G LP E+ + AKL+ YG+TE + LY
Sbjct: 313 IEK--RNIRTIKVCLSGAAPLPVEVATK-FEELTGAKLVEGYGLTEAAPVTHCNPLY--- 366
Query: 233 LETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGA 286
G S +G P P V+ C+D H VG ++ +G
Sbjct: 367 -----------GERKVGS--------IGLPFPSVD-AYCADPDGHPLPPGEVGELVVKGP 406
Query: 287 HVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 346
+VM YW++ + + + + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE
Sbjct: 407 NVMKGYWNR-PEETAQTLKDGWLFTGDVARMDEEGYFYIVDRKKDMIIAGGYNIYPREVE 465
Query: 347 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 406
VL QHP + VVG+ +A E V A V L+E ++ +S E L+
Sbjct: 466 EVLYQHPAVKEAAVVGVPDAYRGETVKAFVVLKEGYEGQ--------------VSEEELK 511
Query: 407 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
Q +E+ L +K P+L+ R P T+ GKI R +R+E
Sbjct: 512 QFAKER-LAAYKVPKLWEF-RDDLPKTAVGKILRRMLRKE 549
>gi|410458806|ref|ZP_11312563.1| long-chain acyl-CoA synthetase [Bacillus azotoformans LMG 9581]
gi|409931156|gb|EKN68144.1| long-chain acyl-CoA synthetase [Bacillus azotoformans LMG 9581]
Length = 537
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 176/385 (45%), Gaps = 46/385 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG +++H ++ ++ + +DV+L + PL H+ G++ +++
Sbjct: 191 ILYTSGTTGKPKGAMLTHKNIVQTAVVTADWMQCSSEDVFLMSMPLYHVMGINFLFRVIV 250
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
A + + K++ + AL +E VT VP + + L + S++ G
Sbjct: 251 SNASLILMDKYKPERALSLIETEKVTVHPGVPTMF--ILELNHPMFSSFDLSSLRTGEIG 308
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P E++ ++ YG+TETS +LT D
Sbjct: 309 GSSCPIEIVHRIRTEM-NCNILVGYGLTETSPTLTLTDFEDD------------------ 349
Query: 250 SVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
+ VGKP P VE+K+ D G VG ++ R VM Y+
Sbjct: 350 --DTIRSETVGKPLPGVEIKIVDDFGNEIGKDKVGELVCRSFGVMKGYYAMHEKTREAID 407
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
G+ W TGD+ ID+ G + ++GR+ IK G +YP+E+E + L HP + ++G+
Sbjct: 408 GDGWFYTGDLAIIDEEGYIRIIGRKQEVIKKAGFKIYPQEIEEIFLTHPNVAEAAMIGMP 467
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
++ + E+ AC+RLR + SE KNK L +K P +
Sbjct: 468 DSEVGEISYACLRLRRGSKNSEEELKDFIKNK-----------------LADYKVPDK-I 509
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMS 449
++ + FP T+TGKIR+ +++ ++ S
Sbjct: 510 IFMEHFPRTATGKIRKIDLQCQIKS 534
>gi|156740435|ref|YP_001430564.1| AMP-dependent synthetase/ligase [Roseiflexus castenholzii DSM
13941]
gi|156231763|gb|ABU56546.1| AMP-dependent synthetase and ligase [Roseiflexus castenholzii DSM
13941]
Length = 515
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 182/388 (46%), Gaps = 50/388 (12%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
IIC+T GTTG PKG +++H + + +A G DDV + APL H GGL+ A L
Sbjct: 167 IICYTGGTTGLPKGAILTHGNVFFNVVNTVAGWGLRPDDVTILNAPLFHTGGLNVFTAPL 226
Query: 129 M-VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 185
+G + +F+ + +EQ VT VP + L R W+ D V+
Sbjct: 227 AHIGGMSIVCRQFDPDQVFDLIEQQGVTIYFGVPTMFLALQRHPR----WETADFSRVRW 282
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+++GG P + + T + YG+TE + ++
Sbjct: 283 MISGGAPCPPPVFE--TFRRRGVPFRTGYGLTEAGPNTFWL------------------- 321
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKP 300
P+ + + VG P PH++L++ ++ VG + RGAHV YW + A+
Sbjct: 322 --PDDDIEHKAGSVGYPLPHIDLRLVNERGEPCAPGEVGELQIRGAHVCAGYWRR-PAET 378
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+ + + WL TGD+ D+ G +VGR I SGGEN+YP EVEAV+ HP ++ + +
Sbjct: 379 AATIVDGWLRTGDLARRDEEGCYTIVGRLKDVIISGGENIYPAEVEAVIAGHPAVLEVAL 438
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G +A E+ A V L E +S+ + + ++L +CR++ L +K P
Sbjct: 439 IGAPDATWGEVGWAVVVLHE-----------ASRQQITDIERQIL-DYCRDR-LARYKIP 485
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREVM 448
+ ++ P T GKI + +RRE +
Sbjct: 486 KRVIV-VDALPRTGAGKIDKRALRREFV 512
>gi|433631621|ref|YP_007265249.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070010]
gi|432163214|emb|CCK60616.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070010]
Length = 547
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 179/394 (45%), Gaps = 49/394 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMA 126
V I +TSGTT PKGV +SH ++ ++GY D P H G + +A
Sbjct: 191 VNIQYTSGTTAYPKGVTLSHRNILNNGYLVGELLGYTAQDRICIPVPFYHCFGMVMGNLA 250
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
GA V P F+ + L AV+ TSL VP + +A L T S++
Sbjct: 251 ATSHGAAMVIPAPGFDPAATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRT 308
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+M++ + + YGMTETS P +
Sbjct: 309 GIMAGAACPVEVMRKVISRMHMPGVSICYGMTETS-------------------PVSTQT 349
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAK 299
+SV + G VG+ PH+E+KV + VG TRG VM YW+
Sbjct: 350 RADDSVDRRVGT-VGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKT 408
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
V + W+ TGD+ +D G V + GR + GGEN+ P E+E +L HP I+
Sbjct: 409 AEVIDADGWMHTGDLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGH 468
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+G+ +A+ E ++A V+LR N L+ E LR++C + + FK
Sbjct: 469 VIGVPDAKYGEELMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKI 512
Query: 420 PRLFVLW-RKPFPLTSTGKIRRDEVRREVMSHLK 452
PR LW FP+T TGK+R+ E+R++ + +L+
Sbjct: 513 PRY--LWIVDEFPMTVTGKVRKVEMRQQALEYLR 544
>gi|418472696|ref|ZP_13042408.1| AMP-binding domain protein [Streptomyces coelicoflavus ZG0656]
gi|371546689|gb|EHN75137.1| AMP-binding domain protein [Streptomyces coelicoflavus ZG0656]
Length = 536
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/434 (31%), Positives = 189/434 (43%), Gaps = 57/434 (13%)
Query: 21 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 80
P+LR V +G S D LTA R+ + + V I +TSGTTG P
Sbjct: 144 PALRETVYIGDPSWD------ALTAAAASVPRERADALAAELSCDDPVNIQYTSGTTGFP 197
Query: 81 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMV---GACHVF- 136
KG +SH ++ VGY E D P H G+ M L V GAC V
Sbjct: 198 KGATLSHHNILNNGYWVGRTVGYTEQDRVCLPVPFYHCFGM--VMGNLGVTSHGACIVIP 255
Query: 137 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 196
P F+ + LEAV++ TSL VP + +A L S++ + G P E
Sbjct: 256 APSFDPVATLEAVQRERCTSLYGVPTMF--IAELNLPDFASYDLTSLRTGIMAGSPCPVE 313
Query: 197 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 256
+MK ++ YGMTETS ++ T D LE H+
Sbjct: 314 VMKRVVAEMHMEQVSICYGMTETSP-VSLQTRMDDDLE-----------------HRTG- 354
Query: 257 VCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 310
VG+ PH+E+KV + G + TRG VML YW++ W+
Sbjct: 355 -TVGRVLPHIEVKVVDPVTGVTVPRGAAGELRTRGYSVMLGYWEEPGKTAEAIDPGRWMH 413
Query: 311 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 370
TGD+ + + G V +VGR I GGEN+YP EVE L HP I + VVG+ + R E
Sbjct: 414 TGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREVEEFLYAHPKIADVQVVGVPHERYGE 473
Query: 371 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 430
V+ACV R++ L+ E LR +C + L +K P L F
Sbjct: 474 EVLACVVPRDAAD---------------PLTLEELRAYC-DGQLAHYKVPSRLQLVDS-F 516
Query: 431 PLTSTGKIRRDEVR 444
P+T +GK+R+ E+R
Sbjct: 517 PMTVSGKVRKVELR 530
>gi|357589271|ref|ZP_09127937.1| AMP-binding domain protein [Corynebacterium nuruki S6-4]
Length = 569
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 188/411 (45%), Gaps = 43/411 (10%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 116
P S P + I +TSGTTG KG ++H ++ + Y + D + P
Sbjct: 191 PVRESLDPHDPINIQYTSGTTGMAKGATLTHHNVLNNGFMIGERLDYTDADRVVVPVPFF 250
Query: 117 HIGGLS-SAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRV 173
H G+ +A + GA + P F +++ LEA TSL+ VP + MA+L L +
Sbjct: 251 HCFGMVIGILAAVTHGAATIIPGPVFNAENTLEAAHHGQATSLLGVPTMFMAELQLLDHL 310
Query: 174 KKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 231
++ K D ++ + G P++ M+E + +++ YGMTETS + T+
Sbjct: 311 EEKGKKLDLSRLRTGVMAGTSCPTKTMREIIDILGISEIGICYGMTETSP-VNHQTM--- 366
Query: 232 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGR-----ILTRGA 286
P+ + VG+ PH+E+K+ V R +L RG
Sbjct: 367 ----------------PDDPVTKRVETVGRVGPHIEVKIVDRDGDAVARGVQGELLVRGY 410
Query: 287 HVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 346
VM YWD + W+ TGD+G +DD G V + GR + GGEN+YP EVE
Sbjct: 411 SVMQGYWDMPEKTAEAVDADGWMHTGDLGQMDDDGYVQITGRIKDMVIRGGENIYPREVE 470
Query: 347 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 406
L +HP + + V+G+ + + E ++A + L D++ + L + +V R
Sbjct: 471 EFLYEHPDVADVQVIGVPDEKYGEELMAWIIL----------SDEAREAGRTLTAGDV-R 519
Query: 407 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 457
C K L FK P+ +V FP+T +GK+R+ E+R + + L P +
Sbjct: 520 GFCDGK-LARFKVPK-YVHVTDSFPMTISGKVRKVEMREKAIGILGMYPMD 568
>gi|395005400|ref|ZP_10389282.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
gi|394316643|gb|EJE53356.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
Length = 564
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 198/443 (44%), Gaps = 52/443 (11%)
Query: 15 LQHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
L+ +PSL+ V +GS + F+ D+L ++ SL A+ I FT
Sbjct: 153 LESARLPSLKTVVQIGSDTVPGFMRFSDLLAMGDPADQAVHSL--GARLRNTDAINIQFT 210
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGA 132
SGTTGSPKG ++H ++ + DD PL H G + +A L GA
Sbjct: 211 SGTTGSPKGATLTHRNVLNNGFFIGEAMRLSPDDRLCIPVPLYHCFGMVVGNLAALTHGA 270
Query: 133 CHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
V+ FE S L AV+ T+L VP + +A L + +++ + G
Sbjct: 271 TIVYPNDAFEPVSVLRAVQDERCTALHGVPTMF--IAELDHPRFKEFDLSTLRTGVMAGS 328
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P E+MK + ++ AYGMTETS + T +TP
Sbjct: 329 PCPIEVMKRVVSEMHMGEVTIAYGMTETSPASC-----QSTTDTP--------------- 368
Query: 252 HQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTG 305
+ + +GK PH+ELKV + S VG + TRG VM YW+
Sbjct: 369 LEKRVSTIGKVLPHLELKVIAPESGEILPVGAVGELCTRGYSVMRGYWEDAAKTSEAIDA 428
Query: 306 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 365
E W+ +GD+ +ID G V + GR + GGENVYP EVE L +H I + V+G+ +
Sbjct: 429 EGWMHSGDLATIDGNGYVNIAGRIKDLVIRGGENVYPREVEEFLYRHSAIQDVQVIGVPD 488
Query: 366 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 425
+ E + A V LR+ SE LR CR + + +K PR ++
Sbjct: 489 QKYGEELCAWVVLRDGATLSEDE----------------LRSFCRGQ-IAHYKIPR-YIR 530
Query: 426 WRKPFPLTSTGKIRRDEVRREVM 448
+ + FP+T TGKI++ V RE+M
Sbjct: 531 FVESFPMTVTGKIQK-FVMREMM 552
>gi|218295731|ref|ZP_03496527.1| AMP-dependent synthetase and ligase [Thermus aquaticus Y51MC23]
gi|218243890|gb|EED10417.1| AMP-dependent synthetase and ligase [Thermus aquaticus Y51MC23]
Length = 557
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 190/408 (46%), Gaps = 59/408 (14%)
Query: 53 LRSLPFT-HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA-------IVGYG 104
L+ P T H+ PE ++ +T GTTG KG +++H L+ L A ++G G
Sbjct: 190 LKRPPATPHASDPEDLALLQYTGGTTGISKGAMLTHKNLVANVLQIDAWDSTSRDLLGKG 249
Query: 105 EDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAI 163
V L P H+ G++ AM L G V +P+ E + +EA+E+H VT VP +
Sbjct: 250 ---VMLGALPFFHVYGMTVAMNYGLYSGYKIVLLPRPEIHAVVEAIEKHGVTHFPGVPTL 306
Query: 164 MADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSL 223
++K + S++ L+G LP E+ K A+L+ YG++E S
Sbjct: 307 YVAFNNFPGIEK--RNVKSIRICLSGAAPLPVEVAKR-FEEITGARLLEGYGLSEASP-- 361
Query: 224 TFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV----- 278
+T +P L G V S+ G P P VE KV + V
Sbjct: 362 --VTHSNPVL----------GPVKKGSI--------GMPLPSVEAKVVDEEGKEVPLGEV 401
Query: 279 GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGE 338
G ++ +G +VM YW++ + + + WL TGD+ +D+ G ++V R+ I +GG
Sbjct: 402 GELIVKGPNVMKGYWNR-PEETQKALKDGWLFTGDLARMDEDGYFYIVDRKKDMIIAGGY 460
Query: 339 NVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKEL 398
N+YP EVE VL H + VVG+ + E V A + L+E+++ + D
Sbjct: 461 NIYPREVEEVLYGHEAVQEAAVVGVPDPYRGETVAAFIVLKEAYRGKVTEKD-------- 512
Query: 399 LLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
+ CR NL +K PR+ + +R+ P +S GKI R E+R E
Sbjct: 513 ------IEAFCR-ANLAAYKVPRI-IQFREGLPKSSVGKILRRELRDE 552
>gi|83719308|ref|YP_443798.1| AMP-binding domain-containing protein [Burkholderia thailandensis
E264]
gi|167620972|ref|ZP_02389603.1| acyl-CoA synthetase [Burkholderia thailandensis Bt4]
gi|83653133|gb|ABC37196.1| AMP-binding enzyme domain protein [Burkholderia thailandensis E264]
Length = 576
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 204/445 (45%), Gaps = 49/445 (11%)
Query: 15 LQHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
L +PSLR V++G+++ + ++ D+L R + + I FT
Sbjct: 165 LHAARVPSLRTVVTMGAAAPAGMLSFADVLARGRAALDPARLDAIGAALDCRDPINIQFT 224
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGA 132
SGTTGSPKG ++H ++ + + +++ E D PL H G+ S +A + VGA
Sbjct: 225 SGTTGSPKGATLTHHNVVNNACSIASVMRLTEVDAMCIPVPLYHCFGMVLSVLACVSVGA 284
Query: 133 CHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
VF + FE + L AV T+L VP + +A L +++ + G
Sbjct: 285 KMVFPGEAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGS 342
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P E MK +++ AYGMTETS P +F + T +S+
Sbjct: 343 PCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSSTTDSL 383
Query: 252 HQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGE 306
+ + VG+ PH+E K+ + V G + TRG VML YWD A+ + +
Sbjct: 384 EK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVD 441
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +
Sbjct: 442 GWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDP 501
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E V A + LR ++ LR+ CR + +K PR +V +
Sbjct: 502 KYGEEVCAWIVLRAGETMTDDE----------------LREFCR-GQIAHYKVPR-YVRF 543
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHL 451
P+T TGK+++ +R ++ L
Sbjct: 544 VDELPMTVTGKVQKFVMRERMIDEL 568
>gi|375139821|ref|YP_005000470.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359820442|gb|AEV73255.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 541
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 174/394 (44%), Gaps = 55/394 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL------SS 123
I +TSGTTG PKG +SH ++ ++ +G DD P H G+ +
Sbjct: 185 IQYTSGTTGFPKGATLSHRNILNNGYFTTELINFGPDDRLCIPVPFYHCFGMVMGNLGCT 244
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
+ + MV + P F+ L+A+E+ T + VP + +A L + + S+
Sbjct: 245 SHGVTMV----IPAPAFDPALTLDAIEKERCTGVYGVPTMF--IAMLGQPDLAQRDLSSL 298
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + G P E+MK N ++ AYGMTETS ++ TL D LE
Sbjct: 299 RTGIMAGSVCPVEVMKRCVNDMNMTEVAIAYGMTETSP-VSCQTLIDDDLER-------- 349
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 297
+ +G+ PHVE+K+ + + G TRG VML YW+
Sbjct: 350 -----------RTGSIGRAHPHVEIKIVDPDTGDIVERGQTGEFCTRGYSVMLGYWEDRA 398
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
E W+ TGD+ + D G +VGR + GGEN+YP E+E L HP +
Sbjct: 399 KTDEAIDPEGWMHTGDLAVMRDDGYCNVVGRIKDMVIRGGENIYPREIEEFLYTHPDVDD 458
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
V+G+ + + E V A VR+ K L ++ LR +K L +
Sbjct: 459 AQVIGVPDEKYGEEVCAWVRM---------------KPGRTPLDAQALRDFASDK-LAHY 502
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
K PR +V FP+T TGK+R+ ++R + + L
Sbjct: 503 KIPR-YVHVVDEFPMTVTGKVRKVDMRADTVRLL 535
>gi|384104353|ref|ZP_10005302.1| CoA synthetase [Rhodococcus imtechensis RKJ300]
gi|383838239|gb|EID77624.1| CoA synthetase [Rhodococcus imtechensis RKJ300]
Length = 511
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 178/383 (46%), Gaps = 40/383 (10%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-M 127
++ ++SGTTG+PKGV++SH ++ +L ++ + L APL HIGG+ A+
Sbjct: 163 VLMYSSGTTGAPKGVMLSHGNMLWNALNQLLAQDMTSKERTLSVAPLFHIGGIGGAVTPA 222
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
L+ G V + KF++ L+ +E+ +T+ VP ++ +L R S++ I
Sbjct: 223 LLNGGTVVLLRKFDAGVVLDTIEKERITTFFAVPTMIQELWHHPRFADA--DLSSLRAIC 280
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G LP L+ + + AYG+TET+ S+T ++ D + + F T
Sbjct: 281 VAGAPLPEALISPWQDR--DVAITQAYGLTETAPSVTMLSSADVRTKIGSAGKRTF--FT 336
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
V +P G PH +G I+ +G +VML Y +Q A +
Sbjct: 337 DVDVVRPDGSSA---EPH-----------EIGEIVAKGPNVMLGYLNQPEATARTIV-DG 381
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
WL TGD G DD G +++ R SGGENVYP EVEA LL+ GI V+G+ + +
Sbjct: 382 WLHTGDAGYFDDEGFLFICDRYKDMYISGGENVYPAEVEAALLRLEGIREAAVIGVPHEK 441
Query: 368 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 427
W E+ L E +R REK L GFK P F+
Sbjct: 442 ----------------WGETGMAFVVAADGTTLDEETVRVRLREK-LAGFKIP-TFIQIA 483
Query: 428 KPFPLTSTGKIRRDEVRREVMSH 450
+ P T+TGKIR+ ++R+ S
Sbjct: 484 EALPRTATGKIRKPDLRKLAASQ 506
>gi|229490610|ref|ZP_04384448.1| acyl-CoA synthetase family member 2 [Rhodococcus erythropolis
SK121]
gi|226184422|dbj|BAH32526.1| putative fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
gi|229322430|gb|EEN88213.1| acyl-CoA synthetase family member 2 [Rhodococcus erythropolis
SK121]
Length = 545
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 177/393 (45%), Gaps = 59/393 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-------- 121
I +TSGTTG PKG +SH ++ + Y E D P H G+
Sbjct: 192 IQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYSEVDRVCIPVPFYHCFGMVMGNLACT 251
Query: 122 SSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
S AM++ G P F+ +++LEAV+ TSL VP + +A L
Sbjct: 252 SHGAAMVIPG------PAFDPRASLEAVQAEKCTSLYGVPTMF--IAELALPDFDSFDLS 303
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P E+MK+ + +++ YGMTETS P
Sbjct: 304 SLRTGIMAGSPCPVEVMKQVIDRMGMSEVSICYGMTETS-------------------PV 344
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQ 295
+ + +S+ Q + VG+ PH+E+K+ + G + TRG VML YW+
Sbjct: 345 SLQTRSDDSIEQ-RTETVGRVGPHLEIKIVDPATGLTVPRGEPGELCTRGYSVMLGYWEN 403
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
W+ TGDIG +D+ G V + GR + GGENVYP E+E L HP I
Sbjct: 404 PEKTAEAIDAARWMHTGDIGVMDEAGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDI 463
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ V+G+ +A+ E ++ V++RE D L ++ +R C K L
Sbjct: 464 LDAQVIGVPDAKYGEELMVWVQMRE-------GADD--------LDADSVRAFCTGK-LA 507
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVM 448
+K PR +V FP+T TGK+R+ +R + +
Sbjct: 508 HYKIPR-YVHVVDEFPMTVTGKVRKIAMREQAI 539
>gi|389681151|ref|ZP_10172496.1| putative long-chain-fatty-acid--CoA ligase [Pseudomonas
chlororaphis O6]
gi|388554687|gb|EIM17935.1| putative long-chain-fatty-acid--CoA ligase [Pseudomonas
chlororaphis O6]
Length = 564
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 199/448 (44%), Gaps = 51/448 (11%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIIC 71
+LQ +P LR +SL + S F+ + AD+ G S+ +L S P+ AV I
Sbjct: 156 QLQSERLPDLRGVISLDAQPPSGFLPWSQL--ADLGAGVSVEALRERQDSLDPDQAVNIQ 213
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVG 131
+TSGTTG PKG +SH ++ +G G +D + PL H G+ +
Sbjct: 214 YTSGTTGFPKGATLSHYNILNNGYMVGESLGLGHEDRLVIPVPLYHCFGMVMGNLGCVTH 273
Query: 132 ACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
+ P F+ L AV + T L VP + +A L + ++ S++ +
Sbjct: 274 GTTMIYPNDAFDPLLTLSAVAEEKATGLYGVPTMF--IAMLDQPRRAEFDLSSLRTGIMA 331
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P E+M+ + +++ AYGMTETS +L+T P
Sbjct: 332 GATCPIEVMRRVISEMHMSEVQIAYGMTETSPV---------SLQT-----------GPA 371
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVST 304
+ + VG+ P +E K+ + + +G + TRG VML YW+
Sbjct: 372 DDLELRVTTVGRTQPQLESKIIDEAGNIVPRGTIGELCTRGYSVMLGYWNNPQGTAEAID 431
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
W+ TGD+ ++++ G V + GR I GGEN+YP E+E HP + + V+GI
Sbjct: 432 QAGWMHTGDLATMNEQGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIP 491
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
++ E +VA ++ SE E L+ C+E+ + FK PR F
Sbjct: 492 CSKYGEEIVAWIKFHPGHTASE----------------EELQAWCKER-IAHFKTPRYFK 534
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ FP+T TGKI++ +R + L+
Sbjct: 535 FVEE-FPMTVTGKIQKFRMREISIEELR 561
>gi|194291334|ref|YP_002007241.1| long-chain-fatty-acid--CoA ligase [Cupriavidus taiwanensis LMG
19424]
gi|193225238|emb|CAQ71180.1| putative AMP-dependent synthetase and ligase, putative
o-succinylbenzoate--CoA ligase [Cupriavidus taiwanensis
LMG 19424]
Length = 546
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 178/399 (44%), Gaps = 47/399 (11%)
Query: 55 SLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI----VQSLAKIAIVGYGEDDVYL 110
+ P H A V+ +TSGTTG PKG +++H L V +A + DD+ L
Sbjct: 174 ATPPAHEPAAHDVVLQLYTSGTTGRPKGAMLTHRNLTIGTEVSEREHLAWSHWVADDISL 233
Query: 111 HTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATL 170
P+ HIGG + L+ GA V +F+ ++ L+ +E V+ L VPA M +
Sbjct: 234 VAMPVAHIGGSGWGLRNLLSGAKGVVAREFDPRAVLDFIEHERVSKLFLVPAAMQIVLRD 293
Query: 171 IRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD 230
R ++ R +K +L G +P+ L++E F + YGMTET+ ++ + D
Sbjct: 294 PRARQVDYSR--LKYLLYGAAPIPAALLREGIEVF-GCGFVQQYGMTETTGTIVALPPED 350
Query: 231 PTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRG 285
T + P+ GK P VELKV VG ++ R
Sbjct: 351 HTTD-----------------EVPRMRAAGKALPGVELKVVDYEGRQLAPGEVGEVVVRS 393
Query: 286 AHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 345
H M YW Q + WL TGD G +D G +++ R I SGGENVYP EV
Sbjct: 394 QHNMAGYWKQPEETARTIDADGWLRTGDAGYMDAEGYLYIHDRVKDMIISGGENVYPAEV 453
Query: 346 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 405
E+ + HP + + V+G+ + + E V A V L+ + +++ +L+
Sbjct: 454 ESAIYGHPQVADVAVIGVPDEKWGEAVKAIVVLKPG----------QAADRDAILA---- 499
Query: 406 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+ + GFK P+ + + P +GK+ R ++R
Sbjct: 500 ---WTRQRVAGFKVPK-SIEFVDALPRNPSGKLLRRKLR 534
>gi|443702072|gb|ELU00234.1| hypothetical protein CAPTEDRAFT_220839 [Capitella teleta]
Length = 603
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 190/419 (45%), Gaps = 48/419 (11%)
Query: 41 DMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI 100
D++T+ + R L + + V I FTSGTTG PK V++SH ++ +
Sbjct: 219 DVMTSGESTAFYRRLLEIQDNVQFDDPVNIQFTSGTTGKPKAVLLSHHNMVNNAYFCTRR 278
Query: 101 VGYGEDDVYLHT-APLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSL 157
+ Y + + PL H G+ +V A P F+ ++ L+++EQ TSL
Sbjct: 279 LNYHQKPHRICVPVPLYHCFGMVVGSLHSIVSAATAVYPSNGFKPEACLKSIEQERCTSL 338
Query: 158 ITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 217
+ P + D+ L DS+ L GG P ++K+ ++ AYG T
Sbjct: 339 LGTPTMFIDILNLPNFDVY--TIDSLNTGLIGGSPCPINVVKQIRTKLHMPEVTIAYGTT 396
Query: 218 ETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH 277
E +S LTF T D T+E Q +G+P PHVE+KV
Sbjct: 397 E-NSPLTFQTCQDDTVER-------------------QVSTIGRPLPHVEVKVVDREGRI 436
Query: 278 V-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGR 332
V G + RG VM Y+ A V + W TGD+ ++D+ +VGR
Sbjct: 437 VPVNTEGELCIRGYVVMHSYYQDEAATVEVLGSDRWYKTGDLATMDEHSYAKIVGRIKDL 496
Query: 333 IKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQS 392
I GGEN+YP EVE VL ++ I + VVG+ + RL E V A ++L+E Q+
Sbjct: 497 IIRGGENIYPLEVEQVLYENSKIEDVQVVGVPDPRLQEQVCAWIKLKEG---------QT 547
Query: 393 SKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ E +++ C+ K L+ FK P ++ + FPLT +GKI++ ++R L
Sbjct: 548 ATADE-------IKEFCKGK-LSYFKIPH-YIQFVDAFPLTVSGKIQKYKIREMAAEQL 597
>gi|403279572|ref|XP_003931321.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 1 [Saimiri boliviensis boliviensis]
Length = 615
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 190/397 (47%), Gaps = 58/397 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-----------APLCH- 117
I FTSGTTGSPKG +SH ++ S+ ++G + + LH PL H
Sbjct: 260 IQFTSGTTGSPKGATLSHYNIVNNSI----LIG---ERLKLHEKTPEKLRIVLPCPLYHC 312
Query: 118 IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
+G + M LM GA + P F K ALEA+ + L P + D+ +
Sbjct: 313 LGSVGGTMVCLMFGATLILSSPIFNGKKALEAISRERGGFLYGTPTMYVDILN----QPD 368
Query: 177 WKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 234
+ D S+ GG + EL++ N +L AYG TE +S +TFM L + T+E
Sbjct: 369 FSSYDISSMYGGTIGGSPVAPELVRAIMNKLNMKELTVAYGTTE-NSPVTFMCLPEDTVE 427
Query: 235 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWD 294
Q ++ G + P++ + + GK A EL G + RG VML YW
Sbjct: 428 ---QKAESVGRIMPHTEARIMNMEAGKLA---ELNT-------PGELFIRGYCVMLGYWG 474
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
+ V + W TGDI +D+ G +VGR I GGEN+YP E+E L HP
Sbjct: 475 EPRKTEEVVDQDKWYRTGDIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELEDFLHTHPK 534
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ + VVG+ + R+ E + AC+RL+ ES + E ++ C+ K +
Sbjct: 535 VQEVQVVGVKDDRMGEEICACIRLKSG---EES-------------TPEEIKAFCKGK-I 577
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ FK PR ++++ +PLT +GK+++ ++R ++ HL
Sbjct: 578 SHFKIPR-YIVFVTEYPLTISGKVQKFKLREQMERHL 613
>gi|113970620|ref|YP_734413.1| AMP-binding domain protein [Shewanella sp. MR-4]
gi|113885304|gb|ABI39356.1| AMP-dependent synthetase and ligase [Shewanella sp. MR-4]
Length = 570
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 196/445 (44%), Gaps = 47/445 (10%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
+LQ A+P L++ + +G+ S + D L ++ S +P A+ I FT
Sbjct: 160 QLQAKALPELQFVIRMGAEQSPGMLNFDDLLLEVTPDDKAALEQIAESLSPYDAINIQFT 219
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGA 132
SGTTGSPKG +SH ++ + + +D PL H G+ + L GA
Sbjct: 220 SGTTGSPKGATLSHHNILNNGYLVAEAMKFTCEDKLCIPVPLYHCFGMVLGNLVCLAKGA 279
Query: 133 CHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
VF F+ + LE VE+ T+L VP + +A L + S++ + G
Sbjct: 280 AAVFPGDSFDPLTTLEVVERERCTALHGVPTMF--IAELEHPEFKRFDLSSLRTGVMAGA 337
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P E+M+ N +++ YG TE S L +T D +E
Sbjct: 338 TCPEEVMRRVQNLMYMQEVLIGYGQTE-CSPLNHITEIDSPVEK---------------- 380
Query: 252 HQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGE 306
+ + VG+ PH E+K+ + + G + +RG +M YW+ + E
Sbjct: 381 ---RVLTVGRALPHTEVKIVDEFGEVLPINTPGEVCSRGYCIMQCYWNDPEKTAATIDSE 437
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
WL +GDIG +D+ G V +VGR I GGEN+YP E+E L H + V G+ +
Sbjct: 438 GWLHSGDIGQMDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVHSD 497
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E V A +++R SE E +R EK FK PR ++ +
Sbjct: 498 KYGEEVCAWIKIRSGATISE----------------EDIRHFLTEK-FAYFKVPR-YIKF 539
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHL 451
+ +P+T TGKI++ ++R + L
Sbjct: 540 VEQYPMTVTGKIQKFKMRELMYQEL 564
>gi|148683984|gb|EDL15931.1| cDNA sequence BC018371, isoform CRA_a [Mus musculus]
Length = 627
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 190/405 (46%), Gaps = 60/405 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSL---AKIAIVGYGEDDVYL-HTAPLCH-IGGLSSA 124
I FTSGTTG+PKG +SH ++ S+ ++ + +++ L +PL H +G +
Sbjct: 260 IQFTSGTTGNPKGATLSHHNIVNNSMLIGQRLKMPTKTAEELRLVLPSPLYHCLGSVGGT 319
Query: 125 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLA----------TLIRV 173
M +M GA + P F K ALEA+ + T L P + D+ T IR
Sbjct: 320 MVSMMHGATLLLSSPSFNGKKALEAISREKGTLLYGTPTMFVDILNQPDFSSYDFTSIRG 379
Query: 174 KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 233
+ + + + G P EL++ N +L+ YG TE +S +TFM + TL
Sbjct: 380 GEVLSKAARLGEGVIAGSPAPPELIRAIINKMNMKELVVVYGTTE-NSPVTFMNFPEDTL 438
Query: 234 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAH 287
E Q G+V G+ PH E ++ + + + G + RG
Sbjct: 439 E------QKAGSV-------------GRIMPHTEAQIVNVETGELTNLNVPGELYIRGYC 479
Query: 288 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 347
VM YW + + W TGDI +D+ G +VGR I GGEN+YP E+E
Sbjct: 480 VMQGYWGEPQKTFETVGQDKWYRTGDIALMDEQGFCKIVGRSKDMIIRGGENIYPAELED 539
Query: 348 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 407
L+HP + VVG+ + R+ E + AC+RL+ ++E ++
Sbjct: 540 FFLKHPQVQEAQVVGVKDERMGEEICACIRLKSGET----------------TTAEEIKA 583
Query: 408 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
C+ K ++ FK PR ++++ + +PLT +GKI++ ++R ++ HLK
Sbjct: 584 FCKGK-ISHFKIPR-YIVFVEGYPLTISGKIQKFKLREQMEQHLK 626
>gi|453069337|ref|ZP_21972599.1| AMP-binding domain protein [Rhodococcus qingshengii BKS 20-40]
gi|452763636|gb|EME21916.1| AMP-binding domain protein [Rhodococcus qingshengii BKS 20-40]
Length = 529
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 177/393 (45%), Gaps = 59/393 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-------- 121
I +TSGTTG PKG +SH ++ + Y E D P H G+
Sbjct: 176 IQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYSEVDRVCIPVPFYHCFGMVMGNLACT 235
Query: 122 SSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
S AM++ G P F+ +++LEAV+ TSL VP + +A L
Sbjct: 236 SHGAAMVIPG------PAFDPRASLEAVQAEKCTSLYGVPTMF--IAELALPDFDSFDLS 287
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P E+MK+ + +++ YGMTETS P
Sbjct: 288 SLRTGIMAGSPCPVEVMKQVIDRMGMSEVSICYGMTETS-------------------PV 328
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQ 295
+ + +S+ Q + VG+ PH+E+K+ + G + TRG VML YW+
Sbjct: 329 SLQTRSDDSIEQ-RTETVGRVGPHLEIKIVDPATGLTVPRGEPGELCTRGYSVMLGYWEN 387
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
W+ TGDIG +D+ G V + GR + GGENVYP E+E L HP I
Sbjct: 388 PEKTAEAIDAARWMHTGDIGVMDEAGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDI 447
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ V+G+ +A+ E ++ V++RE D L ++ +R C K L
Sbjct: 448 LDAQVIGVPDAKYGEELMVWVQMRE-------GADD--------LDADSVRAFCTGK-LA 491
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVM 448
+K PR +V FP+T TGK+R+ +R + +
Sbjct: 492 HYKIPR-YVHVVDEFPMTVTGKVRKIAMREQAI 523
>gi|410461301|ref|ZP_11314953.1| long-chain-fatty-acid--CoA ligase [Bacillus azotoformans LMG 9581]
gi|409926086|gb|EKN63284.1| long-chain-fatty-acid--CoA ligase [Bacillus azotoformans LMG 9581]
Length = 519
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 200/432 (46%), Gaps = 51/432 (11%)
Query: 22 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSL--RSLPFTHSWAPEGAV-IICFTSGTTG 78
++R LG + F+ D + L Y L +SL F E + I+ +TSGTTG
Sbjct: 115 TIRKTADLGVNVDHFIFVDDDAPSGSLDFYELINKSLGFQPVEVSENDLYIMMYTSGTTG 174
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVGACHVFI 137
PKGV+ H ++ + + G+ ++D+ L APL H L +S + L VGA +V +
Sbjct: 175 KPKGVLHKHRDMVHHNFLMMQCQGFTKEDIGLTIAPLNHTAELHTSFLPRLQVGATNVLL 234
Query: 138 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 197
F++K L+ +E+ VT + P + + L+ + K S ++L GG + +
Sbjct: 235 HHFDTKLVLKTLEEAKVTHMFAAPTM---VNMLLNDEDFDKYDLSKLRLLGYGGASMAPV 291
Query: 198 MKEATNSFPKAKLISAYGMTETSSSLTFMTLY-DPTLETPGQLPQAF-------GNVTPN 249
+ + A L+ +G TE ++ LY D LE G +A V P+
Sbjct: 292 LIREFQARTNAGLVQMFGTTEMGPVMS--VLYSDEQLEKAGSAGKAILTHEVRIARVNPD 349
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVW 308
P +C G VG IL +G VM Y+ + A K +++ G W
Sbjct: 350 GPTHPDDLC---------------GIGEVGEILVKGPCVMEGYYKRPDATKAALAYG--W 392
Query: 309 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 368
TGD+GS+D+ G VW+ R + I SG EN+YP EVE LL+HP ++ + V+G + +
Sbjct: 393 YHTGDLGSLDEEGYVWIRDRIDHMINSGAENIYPREVEDQLLEHPDVLEVAVIGEPDPKW 452
Query: 369 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 428
++VV V L+E ++ DQ L+ E L FK PR + +
Sbjct: 453 GQIVVGYVVLKEGSNLEANDLDQ------YLIDGE---------KLAPFKRPRKY-RFID 496
Query: 429 PFPLTSTGKIRR 440
P T +GKI++
Sbjct: 497 ILPKTPSGKIQK 508
>gi|329895575|ref|ZP_08271071.1| Long-chain-fatty-acid--CoA ligase [gamma proteobacterium IMCC3088]
gi|328922254|gb|EGG29604.1| Long-chain-fatty-acid--CoA ligase [gamma proteobacterium IMCC3088]
Length = 522
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 184/390 (47%), Gaps = 49/390 (12%)
Query: 67 AVIICFTSGTTGSPKGVVISHSAL--IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
A + +TSGTTG PKGV +SH L ++ +L+ G D + L AP+ HIGG S
Sbjct: 160 ATLQLYTSGTTGKPKGVALSHRNLSALMNNLSNANPGVLGVDGMDLVCAPMFHIGGAGST 219
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 182
+ L+ G V F K+ LEA+++H + + VPA+ + +L+R + D S
Sbjct: 220 IVPLLCGGAVVMHEAFNPKAVLEAIQKHRIREMFMVPAM---ILSLLRDVPNFDQYDLSS 276
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT--LYDPTLETPGQLP 240
+ I G + L+KEA F K YGMTET ++ ++ ++ L+ +L
Sbjct: 277 LDVIGYGAAPISPTLLKEAVERF-KCGFNQYYGMTETCGTVVALSPEVHQRALQGEPELL 335
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQ 295
QA G C+G VE KVC V G I R A+ ML Y++
Sbjct: 336 QAAGQT-----------CLG-----VEAKVCDSTGVEVPMGETGEIWLRSANNMLHYFNL 379
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
A G W+ TGD G I++ G ++L R + SGGEN+YP EVE VL Q PG+
Sbjct: 380 PEATAKTLVGG-WVLTGDAGYINEEGFIFLRDRIKDMVLSGGENIYPVEVENVLAQLPGV 438
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
V+G+ + + E ++A + + E + S++ + CR+K L
Sbjct: 439 RETAVIGVPDEKYGEALLAFIAMNEGFTPP---------------STQEMIDFCRDK-LA 482
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
G+K PR + P TGKI++ +R
Sbjct: 483 GYKIPRKLEII-DALPRNPTGKIQKMVLRE 511
>gi|359765441|ref|ZP_09269267.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
gi|359317165|dbj|GAB22100.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
Length = 561
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 208/473 (43%), Gaps = 64/473 (13%)
Query: 1 MLVTDESSDSWY---LELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLP 57
++ + DS Y L A P LR V SS + TAD L + R+
Sbjct: 133 VVAAERYKDSDYAGMLAAARPAAPELREVVLF--ESSQWAELTAPPTADELAAVADRAAG 190
Query: 58 FTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH 117
T + + I +TSGTTG PKG +SH + ++ Y DD P H
Sbjct: 191 LTA----DDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGELLDYSADDRICIPVPFYH 246
Query: 118 -IGGLSSAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVK 174
G + +A GA V P F+ ++AL AV H TSL VP + +A+LA L
Sbjct: 247 CFGMVMGNLAATSHGATMVIPSPTFDPEAALRAVADHKCTSLYGVPTMFIAELALLDSGA 306
Query: 175 KTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 234
+ +++ + G P +M++ + ++ YGMTETS T + DP
Sbjct: 307 EF--DLSTLRTGIMAGSPCPEHVMRQVVDRMHMGQVSICYGMTETSPVSTQTRMDDPLEL 364
Query: 235 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHV 288
G VG+ PH+E+KV S G TRG V
Sbjct: 365 RVG--------------------TVGRVGPHLEVKVIDPVSGETLRRGETGEFCTRGYSV 404
Query: 289 MLRYWDQ-------FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 341
M YW+Q + +P+ G W+ TGD+ +D G V + GR + GGEN+Y
Sbjct: 405 MSGYWNQPDKSAEVLIPEPTDPQGSPWMRTGDLAVMDPNGYVRITGRIKDMVIRGGENIY 464
Query: 342 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLS 401
P E+E L HP I+ V+G+ + + E ++A +RLR D +S+ L+
Sbjct: 465 PREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWIRLR----------DGASE-----LT 509
Query: 402 SEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
++ +R+ K + K PR FV K FP+T TGK+R+ ++R E + L +L
Sbjct: 510 ADDVREFATGK-IARHKIPR-FVHVVKEFPMTVTGKVRKVQMREESVEILGTL 560
>gi|357975289|ref|ZP_09139260.1| putative O-succinylbenzoate--CoA ligase [Sphingomonas sp. KC8]
Length = 496
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 179/387 (46%), Gaps = 38/387 (9%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM 125
G + FTSGTTG+PK ++ H L+ L I +G EDD + T P HI G+S+ +
Sbjct: 138 GIAVELFTSGTTGAPKAAILRHDNLLAYILGTIDFMGADEDDAAIVTVPPYHIAGISAVL 197
Query: 126 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV-KKTWKGRDSVK 184
+ + G V +P FE + L+ V +H +++ VP ++ + + +++
Sbjct: 198 SSVYAGRRMVQLPNFEPAAWLDLVCRHAISNAFLVPTMLQRIVEHLDAGGHAAADLPALR 257
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ GGG +P +++ A FP +AYG+TETSS++ L DP A
Sbjct: 258 ALAYGGGKMPLAVIERAMALFPGVDFTNAYGLTETSSTI---CLLDPEAHR-----AAVA 309
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAK 299
+ P +V + G VGKP P +EL + S+ G+ G + RG V Y
Sbjct: 310 SADP-AVRRRLG-SVGKPLPTIELIIRSEDGDVLGAGEAGLVFVRGDQVAGEYH----GL 363
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
S + G+ W T D G +D+ G ++L GR + I GGEN+ P E+E VLL HP +
Sbjct: 364 GSQTDGDGWFPTRDRGWVDEEGYLFLDGRADDVIVRGGENISPGEIEEVLLDHPAVAECA 423
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VV + +A+ E V A + L +E+ D+ L S + Q R
Sbjct: 424 VVAMPDAQWGEAVAAAIVLTAG---AEAGADELQALVRGRLRSSRVPQAIR--------- 471
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRRE 446
FV P TGK+ R +R +
Sbjct: 472 ---FV---AELPYNETGKLLRRVIRED 492
>gi|452910897|ref|ZP_21959574.1| Long-chain-fatty-acid--CoA ligase [Kocuria palustris PEL]
gi|452834069|gb|EME36873.1| Long-chain-fatty-acid--CoA ligase [Kocuria palustris PEL]
Length = 497
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 175/387 (45%), Gaps = 48/387 (12%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
A + ++ FTSGTTG PKG ++H + + + Y +DV L P H+ G +
Sbjct: 150 AADDLAVLLFTSGTTGEPKGAALTHDNVTSNAWMTTRMFSYVPEDVILGALPFFHVFGQT 209
Query: 123 SAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+ A + VGAC +P F+ ++ L+ + +H VT +I VP++ L ++ ++ +
Sbjct: 210 VCLNAPVAVGACISLVPSFQPRAVLQQLGEHGVTRVIGVPSMHMALCQ-VQARQPLE-LP 267
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S+ L+GG LP E+++ F L YG++ETS + F D + PG
Sbjct: 268 SLDSALSGGAALPVEVLRRFEQLF-GITLYEGYGLSETSPVVAFNQPVDQRV--PG---- 320
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQF 296
+G P + + D +G + G +VM YW Q
Sbjct: 321 ----------------SIGTPVEEARVAILDDDGRELPRGEIGELAVAGRYVMAGYWKQP 364
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
+ GE + TGD+ D+ +W+V R+ I G NVYP E+E ++ +HPG+
Sbjct: 365 ELTAAAFAGE-YFRTGDMARQDEDDRLWIVDRKKDTILRNGYNVYPREIEELIYEHPGVE 423
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
VVG A + VVAC+ LR+ Q +E E LR RE +L
Sbjct: 424 EAAVVGRGGATTDQQVVACLVLRDGAQEAE--------------VIEQLRATMRE-SLAS 468
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEV 443
+K P+ + + P STGKI + E+
Sbjct: 469 YKRPQAYKVV-DALPKGSTGKILKREI 494
>gi|399910718|ref|ZP_10779032.1| AMP-binding domain protein [Halomonas sp. KM-1]
Length = 567
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 181/390 (46%), Gaps = 48/390 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG+PKG +SH ++ +G+ E D + PL H G + + +
Sbjct: 215 IQYTSGTTGAPKGATLSHHNILNNGFFVARTMGFSEKDRLVIPVPLYHCFGMVMGNLGCV 274
Query: 129 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA ++ F+ ++ L+AV T+L VP + +A L +++ +
Sbjct: 275 THGATMIYPGDGFDPEATLKAVSDEKATALYGVPTMF--IAELEHPNFAQYDLSTLRTGI 332
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M++ + + YGMTETS T T D LE
Sbjct: 333 MAGSICPIEVMRKVIDKMHMEDVTICYGMTETSPVST-QTKTDAPLEK------------ 379
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ VG PH+E+K+ S + V G + TRG VML YW+ A
Sbjct: 380 -------RVTTVGTIHPHLEVKLVSPETGAVVPRGETGELCTRGYSVMLGYWNNEEATAK 432
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ ++D+ G + +VGR I GGEN+YP E+E L HP I + V+
Sbjct: 433 SIDSAGWMHTGDLATMDEEGYIAIVGRIKDMIIRGGENIYPREIEDFLYTHPAISDVQVI 492
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E V+A V+L E + L+++ L++ C+ K + +K PR
Sbjct: 493 GVPDEKYGEEVMAWVKLGEGQK----------------LNADELKEFCKGK-IAHYKIPR 535
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+V + FP+T TGKI++ ++R E L
Sbjct: 536 -YVKFVDEFPMTVTGKIQKFKMREEATHEL 564
>gi|379737945|ref|YP_005331451.1| putative fatty-acid--CoA ligase [Blastococcus saxobsidens DD2]
gi|378785752|emb|CCG05425.1| Putative fatty-acid--CoA ligase [Blastococcus saxobsidens DD2]
Length = 502
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 184/406 (45%), Gaps = 57/406 (14%)
Query: 54 RSLPFTHSWAPEGA-----VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDV 108
R LP + EG I +TSGTTG PKG + SH + +VG +D
Sbjct: 133 RPLPQGEPYVEEGLRRDELAAIFYTSGTTGFPKGAMTSHENFLTNIENARRVVGLPREDP 192
Query: 109 YLH---TAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIM 164
L + PL H+ G +S + L GA V +P FE L + + + + TVPAI
Sbjct: 193 TLRNLISVPLFHVTGCNSQLLPTLQCGAAAVIMPTFEVGRFLRVIPEERIAIVTTVPAIF 252
Query: 165 ---ADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 221
+ A R+ + V+ GG + +L++ SFP+A++ + +G++ETSS
Sbjct: 253 WLAINQAEFPRIDVS-----GVRYTTYGGAPIAPDLVQAIQRSFPEARVGNGFGLSETSS 307
Query: 222 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGSSHVGR 280
TF LP + + +SV G PAP V+L + +D + VG
Sbjct: 308 ISTF-------------LPHEYASTHADSV--------GFPAPVVDLDLADADPETGVGE 346
Query: 281 ILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENV 340
+L RGA V+ YW++ A T + WL +GD+ IDD G V++V R I GGENV
Sbjct: 347 LLIRGAQVVQGYWNKPEATVQAFT-DGWLHSGDLARIDDDGFVYIVDRAKDMINRGGENV 405
Query: 341 YPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLL 400
Y EVE VL PG+ + VVG+ + + E V A V + + + D+
Sbjct: 406 YCVEVENVLAAAPGVFEVAVVGVPDQMMGEKVGAVVVPQPGIDF---DVDE--------- 453
Query: 401 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
R + L FKAP+ V+ P GK+ + +R E
Sbjct: 454 ----FLGFVRTR-LADFKAPQYVVVRSAALPRNPGGKVLKPVLRTE 494
>gi|297530802|ref|YP_003672077.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
gi|297254054|gb|ADI27500.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
Length = 539
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 200/434 (46%), Gaps = 62/434 (14%)
Query: 27 VSLGSSSSDFVNKRDMLTADILKGYS--LRSLPF--THSWAPEGAVIICFTSGTTGSPKG 82
VS G+ S + + D+ + L S +R +P TH A ++ +T GTTG KG
Sbjct: 149 VSFGAPPSVALAEGDVTFDEFLAAGSGAVRPVPIEPTHDVA-----VLQYTGGTTGRSKG 203
Query: 83 VVISHSALIVQSLAKIAIVG----YGEDDVYLHTAPLCHIGGLSSAMAMLMV-GACHVFI 137
+++H + L +G++ YL PL H+ ++S M + + GA ++ +
Sbjct: 204 AMLTHRNIFANVLQCAEFFKGTFEFGKER-YLTVIPLFHVFAMTSGMNLAIYQGAENILL 262
Query: 138 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 197
P+FE K LE + T VP + + V++ G +S+K +G +P EL
Sbjct: 263 PRFELKEVLETIRDKQPTVFPGVPTMYVAITNTPGVEQY--GINSIKTCNSGSAPMPLEL 320
Query: 198 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 257
M++ + A ++ YG++E S +T +P P + +P V
Sbjct: 321 MRD-FEAKTGAVVLEGYGLSEASP----VTHCNP----------------PFAARKPGTV 359
Query: 258 CVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 312
+G P ++ + G+ VG ++ RG VM YW+ +V + WL TG
Sbjct: 360 GIGMPLTEYKVVDVATGTQELPPGEVGELIIRGPQVMKGYWNMPEETAAVLR-DGWLYTG 418
Query: 313 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 372
D+ SID+ G V +V R+ I +GG N+YP E+E VL +HP + VG+ + E V
Sbjct: 419 DLASIDEEGYVTIVDRKKDLIIAGGYNIYPREIEEVLYEHPAVKEAAAVGVPDPYRGETV 478
Query: 373 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 432
A + L++ Q SE E + HCR KNL +K PR+ V +R P
Sbjct: 479 KAIIVLKDGMQASE----------------EEILAHCR-KNLAAYKVPRI-VEFRAELPK 520
Query: 433 TSTGKIRRDEVRRE 446
T+ GKI R +R E
Sbjct: 521 TNVGKILRRALREE 534
>gi|294633739|ref|ZP_06712297.1| feruloyl-CoA synthetase [Streptomyces sp. e14]
gi|292830381|gb|EFF88732.1| feruloyl-CoA synthetase [Streptomyces sp. e14]
Length = 512
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 179/384 (46%), Gaps = 48/384 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD----VYLHTAPLCHIGGLSSAM 125
+ +TSGTTG PKGV +H A + + I +G D L T PL H+ +S +
Sbjct: 164 LFYTSGTTGRPKGVPTTHKAFVTNAENMIRCLGMARDTGPALRTLITVPLFHVTACNSQL 223
Query: 126 AML-MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ VG V +P S +A+ ++ L+TVPA+ + L +T V+
Sbjct: 224 LIAAYVGGASVIMPALHLPSVAKALTAERISFLVTVPAVYSLLLRQPEFART--DVSGVR 281
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+L GG + L++ +FP+A LI+ YGMTET+S +T + PGQ +
Sbjct: 282 SVLYGGAPIAPSLVRSLKRAFPQATLINGYGMTETASLITLL---------PGQDAEEHA 332
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-HVGRILTRGAHVMLRYWDQFLAKPSVS 303
+ VG P V+L V G VG ++ RGA+V YWD+ A
Sbjct: 333 D------------SVGYAVPSVDLGVVPTGDDPTVGELVVRGANVATGYWDRPKATAETI 380
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ WL TGDI +DD G V +V R I GGEN+ EVEA LL PG+ V+ +
Sbjct: 381 V-DGWLHTGDIVRVDDAGRVHVVDRIKDIINRGGENISSVEVEAALLCAPGVADAAVLAV 439
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E V A + S ++E+ +++ + HCRE +L FK P+
Sbjct: 440 PDEVMGEKVGAVL---------------FSAHEEIDVAAVI--AHCRE-HLADFKVPQYA 481
Query: 424 VLWRKPFPLTSTGKIRRDEVRREV 447
+ + P + GK+ + +R ++
Sbjct: 482 AVVTEALPRNAGGKLLKGRLREQI 505
>gi|448237839|ref|YP_007401897.1| acyl-CoA synthetase [Geobacillus sp. GHH01]
gi|445206681|gb|AGE22146.1| acyl-CoA synthetase [Geobacillus sp. GHH01]
Length = 544
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 181/392 (46%), Gaps = 47/392 (11%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-I 118
S P + + +TSGTTG PKGV++++ ++ + +G GE D P H
Sbjct: 182 ESLDPHDVINMQYTSGTTGFPKGVMLTNYNIVNNAHQVAQCMGLGEGDRLCIPVPFFHCF 241
Query: 119 GGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
G + S +A + VGA V + +F K LE VE T+L VP + +A L
Sbjct: 242 GCVMSTLACVTVGATMVPVVEFHPKRVLETVEAERCTALHGVPTMF--IAELNDPDFAKY 299
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
S++ + G P E+MK + AYG TE S +T DP LE +
Sbjct: 300 DLSSLRTGIMAGSPCPVEVMKAVIEKMGMKDITIAYGQTEASPVITQTRTDDP-LELRVE 358
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRY 292
VG+ P VE+K+ G++ G + TRG HVM Y
Sbjct: 359 -------------------TVGRALPGVEVKIVEPGTNKEVPRGVQGELCTRGYHVMKGY 399
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
++ A + WL TGD+ ++D+ G + GR I GGEN+YP E+E L +H
Sbjct: 400 YNNPEATNEAIDQDGWLHTGDLATMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKH 459
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P I+ + VVG+ + E V+A + L++ ++E +R+ CR
Sbjct: 460 PKILDVQVVGVPDEVYGEEVMAWIILKDGET----------------ATAEEIREFCR-G 502
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
N++ K PR ++ + +P+T++GKI++ ++R
Sbjct: 503 NISRHKIPR-YIEFTDSYPMTASGKIQKFKLR 533
>gi|397736475|ref|ZP_10503157.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396927665|gb|EJI94892.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 545
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 175/388 (45%), Gaps = 47/388 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E+D P H G+ +A
Sbjct: 192 IQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYTENDRVCIPVPFYHCFGMVMGNLACT 251
Query: 129 MVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA + P F+ K+ L+AVE TSL VP + +A L S++ +
Sbjct: 252 SHGATMIIPGPSFDPKATLQAVEAEKCTSLYGVPTMF--IAELAEPDFASFDLSSLRTGI 309
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK+ A++ YGMTETS ++ T D T++
Sbjct: 310 MAGSPCPVEVMKQVIEQMGMAEVSICYGMTETSP-VSLQTRSDDTIDQ------------ 356
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ VG+ PH+E+K+ + G + TRG VML YW+
Sbjct: 357 -------RVSTVGRVGPHLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAE 409
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGDIG +D G V + GR + GGENVYP E+E L HP I+ V+
Sbjct: 410 AIDAGRWMHTGDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVI 469
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ +A+ E ++ VR+++ + L + +R+ C K L +K P+
Sbjct: 470 GVPDAKYGEELMVWVRMKDGAE---------------PLDAAKVREFCTGK-LAHYKIPK 513
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMS 449
+V FP+T TGK+R+ E+R + +
Sbjct: 514 -YVHVVDEFPMTVTGKVRKVEMREQSLD 540
>gi|433649233|ref|YP_007294235.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
smegmatis JS623]
gi|433299010|gb|AGB24830.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
smegmatis JS623]
Length = 497
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 183/388 (47%), Gaps = 39/388 (10%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ ++ FTSGTT PK V ++H+ L + D L P HI G+S+
Sbjct: 138 PDSVGVVLFTSGTTSKPKAVELTHNNLTSYVTGTVEFDSADPADAALICVPPYHIAGVSA 197
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
A++ L G V++ +F++ V VTS VP ++ + +++ + G ++
Sbjct: 198 ALSNLYAGRKMVYLRQFDAHEWTRLVRDEGVTSATVVPTMLDRIVSVLEAEPV--GLPTL 255
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + GG + L++ A P ++AYG+TETSS++ +T D +A
Sbjct: 256 RNLAYGGSKVALPLIRRALGLLPDVGFVNAYGLTETSSTIAVLTPDDH---------RAA 306
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLA 298
T +V + G VG+P P +E+++ D G G + RG V RY D
Sbjct: 307 LAATDEAVARRLG-SVGQPVPSIEVQIRGDDGSVLGPGETGELFVRGEQVSGRYTDIG-- 363
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
SV + W T D+ +D+GG +++ GR + I GGEN+ P E+E VL++HP +
Sbjct: 364 --SVLDADGWFPTKDVAMLDEGGYLFIGGRSDDTIIRGGENIAPAEIEDVLVEHPAVRDC 421
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG + +++VA V D ++ + + LR+H R +L G +
Sbjct: 422 AVVGPEDPEWGQIIVAVV----------VPADGATPDP------DELREHVR-AHLRGSR 464
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRRE 446
P V++R P +TGK+ R E+ E
Sbjct: 465 TPDR-VVFRDELPTNATGKVLRRELVDE 491
>gi|359425223|ref|ZP_09216323.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
gi|358239311|dbj|GAB05905.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
Length = 551
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 135/477 (28%), Positives = 201/477 (42%), Gaps = 73/477 (15%)
Query: 1 MLVTDESSDSWYLEL---QHTAIPSLR---------WHVSLGSSSSDFVNKRDMLTADIL 48
+L TD DS Y + A P LR W L + D + + A
Sbjct: 127 VLATDRFKDSEYAAMLGQAQPACPGLREVVLFDSPGWQAMLSEPAPDEAARVGQIAA--- 183
Query: 49 KGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDV 108
S +P+ + I +TSGTTG PKG +SH + ++ Y + D
Sbjct: 184 ------------SLSPDDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGELLEYTDTDR 231
Query: 109 YLHTAPLCH-IGGLSSAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MA 165
P H G + +A GA V P F+ ++ L AVE+H TSL VP + +A
Sbjct: 232 ICLPVPFYHCFGMVMGNLAATSHGAAMVIPAPAFDPEATLRAVERHRCTSLYGVPTMFIA 291
Query: 166 DLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTF 225
+L L S++ + G P +M+ + +++ YGMTETS ++
Sbjct: 292 ELDLLDHAGSAAYDLSSLRTGIMAGSPCPEAVMRRVVDEMHMSQVSICYGMTETSP-VSM 350
Query: 226 MTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VG 279
T D LE + VG+ PH+E+K+ + VG
Sbjct: 351 QTRTDDPLEL-------------------RVGTVGRVGPHLEIKMIDPVTGETVPRGRVG 391
Query: 280 RILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGEN 339
TRG VM YWDQ + W+ TGD+ + + G V + GR + GGEN
Sbjct: 392 EFCTRGYSVMKGYWDQPDKTAEAIDADGWMRTGDLAVMRENGYVEITGRIKDMVIRGGEN 451
Query: 340 VYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELL 399
+YP E+E L HP I+ V+G+ + E ++A +RLR D +S
Sbjct: 452 IYPREIEEFLYTHPDILDAQVIGVPDDSYGEELMAWIRLR----------DGASG----- 496
Query: 400 LSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPS 456
L+ E +R+ K + K PR +V + FP+T TGKIR+ +R E M L PS
Sbjct: 497 LTVEQVREFATGK-IARHKIPR-YVHIVEAFPMTVTGKIRKVAMREESMGLLGDPPS 551
>gi|300783387|ref|YP_003763678.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|384146618|ref|YP_005529434.1| AMP-binding protein [Amycolatopsis mediterranei S699]
gi|399535272|ref|YP_006547934.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
gi|299792901|gb|ADJ43276.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|340524772|gb|AEK39977.1| AMP-binding domain protein [Amycolatopsis mediterranei S699]
gi|398316042|gb|AFO74989.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
Length = 548
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 178/392 (45%), Gaps = 46/392 (11%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
+P+ + I +TSGTTG PKG +SH ++ A+ GY D P H G+
Sbjct: 179 SPDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGALCGYTPADRVCIPVPFYHCFGMV 238
Query: 123 SAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ IP F+ ++ LEAV++ TSL VP ++ +A L K
Sbjct: 239 MGNLACTSHGATMVIPAQGFDPEATLEAVQRERCTSLYGVPTMLF-IAELNHPKFAAYDL 297
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
S++ + G P E+MK+ + ++ YGMTETS T T D +L+
Sbjct: 298 SSLRTGIMAGSPCPVEVMKQVVSRMGMEQVTICYGMTETSPVST-QTRMDDSLDL----- 351
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWD 294
+ VG+ PH+E+K+ + G + TRG VML YW+
Sbjct: 352 --------------RVSTVGRVHPHLEIKLVDPATGLTVPRGEAGELCTRGYSVMLGYWN 397
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
W+ TGD+ +D G V + GR + GGEN+YP E+E L HP
Sbjct: 398 DPGKTAEAIDAARWMHTGDLAVMDADGYVNITGRIKDMVIRGGENIYPREIEEFLYTHPD 457
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
I+ V+G+ + + E + A V+LR D +++ +++E LR K L
Sbjct: 458 IVDAQVIGVPDVKYGEELCAWVKLR----------DHAAE-----VTAETLRAFATGK-L 501
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
+K PR +VL FP+T TGK+R+ E+R +
Sbjct: 502 AHYKIPR-YVLVVDEFPMTVTGKVRKIEMREK 532
>gi|261419227|ref|YP_003252909.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC61]
gi|319766043|ref|YP_004131544.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
gi|261375684|gb|ACX78427.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC61]
gi|317110909|gb|ADU93401.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
Length = 539
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 200/434 (46%), Gaps = 62/434 (14%)
Query: 27 VSLGSSSSDFVNKRDMLTADILKGYS--LRSLPF--THSWAPEGAVIICFTSGTTGSPKG 82
VS G+ S + + D+ + L S +R +P TH A ++ +T GTTG KG
Sbjct: 149 VSFGAPPSVALAEGDVTFDEFLAAGSGAVRPVPIEPTHDVA-----VLQYTGGTTGRSKG 203
Query: 83 VVISHSALIVQSLAKIAIVG----YGEDDVYLHTAPLCHIGGLSSAMAMLMV-GACHVFI 137
+++H + L +G++ YL PL H+ ++S M + + GA ++ +
Sbjct: 204 AMLTHRNIFANVLQCAEFFKGTFEFGKER-YLTVIPLFHVFAMTSGMNLAIYQGAENILL 262
Query: 138 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 197
P+FE K LE + T VP + + V++ G S+K +G +P EL
Sbjct: 263 PRFELKEVLETIRDKQPTVFPGVPTMYVAITNTPGVEQY--GISSIKTCNSGSAPMPLEL 320
Query: 198 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 257
M++ + A ++ YG++E S +T +P P + +P V
Sbjct: 321 MRD-FEAKTGAVVLEGYGLSEASP----VTHCNP----------------PFAARKPGTV 359
Query: 258 CVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 312
+G P ++ + G+ VG ++ RG VM YW+ + + + + WL TG
Sbjct: 360 GIGMPLTEYKVVDVATGTQELPPGEVGELIIRGPQVMKGYWN-MPEETAAALRDGWLYTG 418
Query: 313 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 372
D+ SID+ G V +V R+ I +GG N+YP E+E VL +HP + VG+ + E V
Sbjct: 419 DLASIDEEGYVTIVDRKKDLIIAGGYNIYPREIEEVLYEHPAVKEAAAVGVPDPYRGETV 478
Query: 373 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 432
A + L++ Q SE E + HCR KNL +K PR+ V +R P
Sbjct: 479 KAIIVLKDGMQASE----------------EEILAHCR-KNLAAYKVPRI-VEFRAELPK 520
Query: 433 TSTGKIRRDEVRRE 446
T+ GKI R +R E
Sbjct: 521 TNVGKILRRALREE 534
>gi|423628110|ref|ZP_17603859.1| hypothetical protein IK5_00962 [Bacillus cereus VD154]
gi|401269974|gb|EJR75999.1| hypothetical protein IK5_00962 [Bacillus cereus VD154]
Length = 518
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 193/389 (49%), Gaps = 50/389 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLS-SAMAM 127
I +TSGTTG+PKGV+++H A +VQS I + + DV++ +APL HI G++ + +
Sbjct: 169 ILYTSGTTGTPKGVMVTHRA-VVQSARTIGTELHCTQKDVFIISAPLFHIFGMAINMLCA 227
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ +G + KF + L+ +EQ VT VP + L K S++ L
Sbjct: 228 VAMGGRFILQEKFHPRETLQLIEQEKVTIQKGVPTMFIKELELEDFDKY--NLSSLRAGL 285
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G +P++ + E L ++G+TET S M+ YD T E N+T
Sbjct: 286 VGAAPIPAKTVTEIRERM-GINLCQSFGITETVS--ITMSSYDDTKE----------NIT 332
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
+GK P V LK+ + VG I +G VM Y++ V
Sbjct: 333 ET---------LGKAIPGVTLKIVDENRVALPPGEVGEIAVKGFGVMKGYYNMPEQTNQV 383
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
E W +GD+G++D G + VGR+ I GG NVYP+E+EAV+++HP +I V+G
Sbjct: 384 LDNEEWYYSGDLGTLDSQGYLRFVGRKKEMIIRGGLNVYPQEIEAVIMKHPKVIEAAVIG 443
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + L E+ A +RL KN E+ E+ + + +E+ + +K P
Sbjct: 444 LPDKVLGEVACAVIRL---------------KNGEISTEEEI-KIYLKER-MAIYKLPEK 486
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
V++ FP+T++GKI++ +++ +V S++
Sbjct: 487 -VIFTDEFPVTASGKIQKLKLKEQVSSNI 514
>gi|291228112|ref|XP_002734032.1| PREDICTED: fatty Acid CoA Synthetase family member (acs-2)-like
[Saccoglossus kowalevskii]
Length = 621
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 184/405 (45%), Gaps = 64/405 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCHIGGLS-SAMAM 127
I +TSGTTG+PKGV +SH ++ +GY E D V PL H G++ +++
Sbjct: 255 IQYTSGTTGNPKGVTLSHHNILNNCNIVGRTLGYHERDHVICIPVPLYHCFGMTLGSLSG 314
Query: 128 LMVGACHVFIPK-FESKSALEAVEQ----------HCV---TSLITVPAIMADLATLIRV 173
+ G+ V+ FE + L+A+E HC+ TS P + DL
Sbjct: 315 QIFGSTAVYPSAGFEPEETLKAIENERLISCLYVCHCLFRCTSQYGTPTMFIDLLHHPHF 374
Query: 174 KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT-LYDPT 232
K S+ + GG P E MK+ ++ YG+TETS +TF T +DP
Sbjct: 375 DKY--DMSSLFTGIMGGSPCPIETMKQVITKMNMKEVTICYGLTETSP-ITFQTSRFDPI 431
Query: 233 LETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGA 286
+ + +GKP H E K+ S H+ G + TRG
Sbjct: 432 --------------------ELRVSTIGKPVSHTEAKIIDPESGHIKAVETPGEMCTRGF 471
Query: 287 HVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 346
ML YW S+ + WL GDI +D+ G +VGR N I GGEN+YP E+E
Sbjct: 472 STMLGYWGDEEKTKSIIGSDRWLHNGDIAVMDETGYCRIVGRMNDMIIRGGENIYPVEIE 531
Query: 347 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 406
L +HP I + V+G+ + RL E+V A ++L+ + SE ++
Sbjct: 532 KFLYKHPKIEDVQVIGVPDERLGEVVCAWIKLKAAQTASEHE----------------IK 575
Query: 407 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
C + + FK P+ ++ + FP+T +GKI++ ++R E + L
Sbjct: 576 DFC-QGQIAYFKIPQ-YICFVDSFPMTISGKIKKLQMREESLGML 618
>gi|119899356|ref|YP_934569.1| AMP-binding protein [Azoarcus sp. BH72]
gi|119671769|emb|CAL95683.1| Long-chain fatty-acid-CoA ligase [Azoarcus sp. BH72]
Length = 562
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 202/453 (44%), Gaps = 65/453 (14%)
Query: 15 LQHTAIPSLRWHVSLGSSSS----DFVN-----KRDMLTADILKGYSLRSLPFTHSWAPE 65
L+ +P+L + +G+ + +F + RD LTA L G L+ +
Sbjct: 151 LRAHKLPTLEMVIRMGAEKTPGMLNFDDLLAPPTRDELTALALLGEKLQF---------D 201
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA- 124
A+ I FTSGTTG+PKG +SH ++ + D PL H G+
Sbjct: 202 EAINIQFTSGTTGNPKGATLSHHNILNNGFFVGEAIRLVAGDRVCIPVPLYHCFGMVMGN 261
Query: 125 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
+ L GA V+ + FE ++ L+ + + T+ VP + +A L ++
Sbjct: 262 LGCLTHGATMVYPAEAFEPQAVLKTLAEERCTAAYGVPTMF--IAVLDHPDFAAADLSAL 319
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + G P E+MK + ++ AYGMTETS ++F + D LE
Sbjct: 320 RTGIMAGSPCPIEVMKRVVDKMHMKEVTIAYGMTETSP-VSFQSGTDDPLER-------- 370
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 298
+ VG+ PH E+K+ + V G + TRG VML YWD
Sbjct: 371 -----------RVSTVGRIQPHCEVKIIDNDGRIVPRGMPGELCTRGYSVMLGYWDDEAK 419
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
W+ TGD+ IDD G +VGR + GGEN+YP E+E L +HP I+ +
Sbjct: 420 TREALDAAGWMHTGDLAVIDDEGYCNIVGRIKDMVIRGGENIYPREIEEFLYRHPQILDV 479
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG+ + + E + A + LRE + LS+ +R +C + + +K
Sbjct: 480 QVVGVPDQKYGEELCAWIILREGAE----------------LSANDVRAYC-QGQIAHYK 522
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
PR ++ + FP+T TGKI++ ++R ++ L
Sbjct: 523 IPR-YIKFVDSFPMTVTGKIQKFQIREQMKREL 554
>gi|333989385|ref|YP_004521999.1| long-chain-fatty-acid-CoA ligase [Mycobacterium sp. JDM601]
gi|333485353|gb|AEF34745.1| long-chain-fatty-acid-CoA ligase [Mycobacterium sp. JDM601]
Length = 492
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 183/393 (46%), Gaps = 43/393 (10%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ ++ FTSGTT +PK V ++H+ L + G +D L P HI G+ +
Sbjct: 138 PDDVAVVLFTSGTTSAPKAVELTHNNLTSYITQTVEFGSAGPEDAALICVPPYHIAGVGA 197
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
A++ L G V++ +F + V+ VT+ VP ++ + + + ++
Sbjct: 198 ALSNLYAGRKSVYLRRFSPAEWIRLVKDEAVTTATVVPTMLERIVSELEAHPAPL--PTL 255
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + GG + L++ A + P ++AYG+TETSS++ +T P A+
Sbjct: 256 RNLAYGGSKVALPLVRRALDLLPDVGFVNAYGLTETSSTVAVLT--------PDDHRTAY 307
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLA 298
T +V + G VG+P P +E+ + D + G + RG V Y
Sbjct: 308 A-ATDEAVRKRLG-SVGRPVPGIEVVIRDDEGRPVAAGEPGELFLRGEQVSGTYTGMG-- 363
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
SV + W T D+ +DD G +++VGR + I GGEN+ P E+E VL++HP + +
Sbjct: 364 --SVLDADGWFPTRDLAVLDDEGYLYIVGRSDDTIIRGGENIAPAEIEDVLVEHPQVREV 421
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG + +++VACV + E E LR++ RE+ L G +
Sbjct: 422 AVVGAPDPEWGQIIVACV------------VAAPGASPE----PEALREYVREQ-LRGSR 464
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
P V +R P T TGK+ +RRE++ L
Sbjct: 465 TPDRIV-FRSELPTTPTGKV----LRRELLDDL 492
>gi|221202175|ref|ZP_03575210.1| AMP-binding domain protein [Burkholderia multivorans CGD2M]
gi|221208764|ref|ZP_03581763.1| AMP-binding domain protein [Burkholderia multivorans CGD2]
gi|221171396|gb|EEE03844.1| AMP-binding domain protein [Burkholderia multivorans CGD2]
gi|221177969|gb|EEE10381.1| AMP-binding domain protein [Burkholderia multivorans CGD2M]
Length = 575
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 205/457 (44%), Gaps = 69/457 (15%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADIL-------KGYSLRSLPFTHSWAPEG 66
EL+ +PSLR VS+G D AD++ +L +L T AP
Sbjct: 163 ELRAARVPSLRTVVSMG----DVAPPGMFRFADVIARGRASVDSAALDALGAT--LAPSD 216
Query: 67 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-M 125
+ I FTSGTTGSPKG ++H ++ + + + E D PL H G+ A +
Sbjct: 217 PINIQFTSGTTGSPKGATLTHRNVVNNARFIAMAMRFTEQDALCIPVPLYHCFGMVLAVL 276
Query: 126 AMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
A + GA VF + F+ + L AV + T+L VP + +A L + +++
Sbjct: 277 ACVSTGAAMVFPGEAFDPVATLAAVAEERCTALHGVPTMF--IAELDHPEFAKFDLSTLR 334
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E MK + +++ AYGMTETS P +F
Sbjct: 335 TGIMAGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSFQ 375
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 299
+ T + + + + VG+ PH+E+K+ V G + T+G VML YWD
Sbjct: 376 SSTDDPLEK-RTTTVGRVQPHLEVKIVDPSGEIVPVGVTGELCTKGYSVMLGYWDD---- 430
Query: 300 PSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
T EV W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I
Sbjct: 431 -DAKTREVLIDGWMHTGDLATLDAEGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKI 489
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
V G+ + + E + A + LR Q +E + +R C + +
Sbjct: 490 QSAQVFGVPDPKYGEELCAWIVLRADEQMTEDD----------------VRAFC-QGQIA 532
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+K PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 533 HYKIPR-YIRFVDELPMTVTGKVQKFVMRERMIDELK 568
>gi|291454988|ref|ZP_06594378.1| acyl-CoA synthetase [Streptomyces albus J1074]
gi|421742720|ref|ZP_16180829.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Streptomyces
sp. SM8]
gi|291357937|gb|EFE84839.1| acyl-CoA synthetase [Streptomyces albus J1074]
gi|406688858|gb|EKC92770.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Streptomyces
sp. SM8]
Length = 541
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 171/387 (44%), Gaps = 55/387 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ VGY E D P H G+ +A
Sbjct: 193 IQYTSGTTGFPKGATLSHHNILNNGYFVGENVGYTEQDRICLPVPFYHCFGMVMGNIAAT 252
Query: 129 MVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMA---DLATLIRVKKTWKGRDSVK 184
GAC V P F+ + L AV Q TSL VP + +LA T S++
Sbjct: 253 THGACIVIPGPVFDPVTTLTAVAQERCTSLYGVPTMFIGELNLADFASYDLT-----SLR 307
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E+MK A++ YGMTETS P +
Sbjct: 308 TGIMAGSPCPEEVMKRVVAEMHMAEVSICYGMTETS-------------------PVSTQ 348
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLA 298
+S+ G VG+ PH+E+KV G+ G + TRG VML YW++
Sbjct: 349 TRRDDSLAHRTGT-VGRVLPHLEVKVVDPGTGITVERGEAGELCTRGYSVMLGYWEEPER 407
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
W+ TGD+ + G V +VGR I GGEN+YP E+E L HP I +
Sbjct: 408 TAEAVDPAGWMHTGDLAVLRRDGYVEIVGRIKDMIIRGGENIYPREIEEFLYTHPKIADV 467
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG+ + + E V+ACV K L+ E LR CR++ L +K
Sbjct: 468 QVVGVPDGKYGEEVLACV---------------IPKQNAGPLTLEELRAFCRDR-LAHYK 511
Query: 419 AP-RLFVLWRKPFPLTSTGKIRRDEVR 444
P RL +L FP+T +GK+R+ E+R
Sbjct: 512 VPSRLQLL--DAFPMTVSGKVRKIELR 536
>gi|383790511|ref|YP_005475085.1| acyl-CoA synthetase [Spirochaeta africana DSM 8902]
gi|383107045|gb|AFG37378.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Spirochaeta
africana DSM 8902]
Length = 470
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 184/392 (46%), Gaps = 49/392 (12%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ ++ +TSGTTG PKGV ++H Q I+ + D + PL H+ GL++
Sbjct: 112 PDDPAVLLYTSGTTGKPKGVTLTHRNFATQCDNAAQILPMSDKDRMVLVLPLYHVYGLAN 171
Query: 124 AMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+ + +G+ V IP++ LE + + T LI VP + L + +V+KT + S
Sbjct: 172 GLVTSVSMGSTMVIIPQYTPSVLLETIARTKATMLIAVPTMYMHLLQIAKVRKTAIPQ-S 230
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
+ ++GG L + ++E ++F + YG+TET+S++ L ++
Sbjct: 231 LHTCISGGAPLAAATLQEFEDAFDTV-IAEGYGLTETTSAVC--------------LNKS 275
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFL 297
+ P + +G PAP +E+KV D + V G I+ RG + YW+
Sbjct: 276 GEDYKPGA--------IGIPAPGIEMKVVDDDGNEVPDGTEGEIIIRGGVLTPGYWND-T 326
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
A + S WL TGD+G D G ++ R+ I GG N+ P E+E VL HPGI
Sbjct: 327 ASTAESIRNGWLHTGDLGYRDHDGVFFITDRKKDLIIRGGFNISPREIEEVLYGHPGIHE 386
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
V + + R EMV A V E +E +VL +CR NL +
Sbjct: 387 AAVAAVHDKRDREMVKAFVVPAEGVSLTE---------------QQVL-DYCR-ANLADY 429
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 449
K P+ V + + P ++TGK+ R E+R E +
Sbjct: 430 KTPKR-VEFMEALPKSATGKVLRKELRGEAVD 460
>gi|424853927|ref|ZP_18278285.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356663974|gb|EHI44067.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 496
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 177/378 (46%), Gaps = 40/378 (10%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-M 127
++ ++SGTTG+PKGV++SH ++ +L ++ + L APL HIGG+ A+
Sbjct: 148 VLMYSSGTTGAPKGVMLSHGNMLWNALNQLLAQDMTSKERTLSVAPLFHIGGIGGAVTPT 207
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
L+ G V + KF++ L+ +E+ +T+ VP ++ +L R S++ I
Sbjct: 208 LLNGGTVVLLRKFDAGVVLDTIEKERITTFFAVPTMIQELWHHPRFADA--DLSSLRAIC 265
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G LP L+ + + AYG+TET+ S+T ++ D + + F T
Sbjct: 266 VAGAPLPEALISPWQDR--DVAITQAYGLTETAPSVTMLSSADVRSKIGSAGKRTF--FT 321
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
V +P G PH +G I+ +G +VML Y +Q A +
Sbjct: 322 DVDVVRPDGSSA---EPH-----------EIGEIVAKGPNVMLGYLNQPEATARTIV-DG 366
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
WL TGD G DD G +++ R SGGENVYP EVEA LL+ GI V+G+ + +
Sbjct: 367 WLHTGDAGYFDDEGFLFICDRYKDMYISGGENVYPAEVEAALLRLEGIREAAVIGVPHEK 426
Query: 368 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 427
W E+ L E +R REK L GFK P F+
Sbjct: 427 ----------------WGETGMAFVVAADGTTLDEETVRARLREK-LAGFKIP-TFIQIA 468
Query: 428 KPFPLTSTGKIRRDEVRR 445
+ P T+TGKIR+ ++R+
Sbjct: 469 EALPRTATGKIRKPDLRK 486
>gi|308273719|emb|CBX30321.1| hypothetical protein N47_D31300 [uncultured Desulfobacterium sp.]
Length = 525
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 182/374 (48%), Gaps = 38/374 (10%)
Query: 30 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 89
G SD V ++++ +DI + P ++ E A + +TSGTTG PKGVV +
Sbjct: 141 GPGQSDAVEFKNLIYSDI------DNYPSINNSGYEMASSLIYTSGTTGRPKGVVRNSEN 194
Query: 90 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAV 149
+ L I G+G DD+++ PLCH LS A + G V +PKF++K+ LE +
Sbjct: 195 RLNIMLLYAFITGWGFDDIHIVAGPLCHTAPLSFATCSFLFGNTVVIMPKFDAKNFLELI 254
Query: 150 EQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPK 207
++H VT+ VP ++ + L ++T G D S++ I+ G P L K+A F
Sbjct: 255 QKHRVTTTFVVPTMLNRICNL--PQETLNGYDISSLRLIIVTGEAFPFNLKKKAVEIFGN 312
Query: 208 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 267
K+ YG TE S +T++ LPQ + + +P G C GK AP V+
Sbjct: 313 DKIYEMYGGTEL-SCVTYL------------LPQ-------DQIKKP-GSC-GKAAPGVD 350
Query: 268 LKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 322
+++ + V G+I + ++ Y++ A S + + GD+ +D+ G
Sbjct: 351 IRLLDSDKNEVPTGETGKIYVKSPFLLGGYYENTKATRS-NYHNGYFTVGDMARMDEDGY 409
Query: 323 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 382
++ R + SGG N+YP E+E VLL H I V+G+ + E +VA V +++
Sbjct: 410 YYIADRDVDMVISGGVNIYPAEIEQVLLNHKEIYDASVIGVPDVNWGERLVAYVVAQKNA 469
Query: 383 QWSESNCDQSSKNK 396
+ SE + K+K
Sbjct: 470 EISEQDIIDYVKDK 483
>gi|317129858|ref|YP_004096140.1| AMP-dependent synthetase and ligase [Bacillus cellulosilyticus DSM
2522]
gi|315474806|gb|ADU31409.1| AMP-dependent synthetase and ligase [Bacillus cellulosilyticus DSM
2522]
Length = 572
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 187/398 (46%), Gaps = 53/398 (13%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLA-KIAIVGYGE-DDVYLHTAPLCHIGGLS 122
E ++ +T GTTG KGV+++H L+V + ++ + E ++V L P H+ G++
Sbjct: 209 EDLALLQYTGGTTGPAKGVMLTHYNLVVNTQQCQLWMPKLNEAEEVVLAALPFFHVYGMT 268
Query: 123 SAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+ M + + +G + +PKFE K L+A+E+H T P + L + K
Sbjct: 269 TVMNLSIRMGFKMIIMPKFEPKDILKAIEKHKATLYPGAPTMYIGLLNHPDITK--HDLS 326
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S+K ++G LP E+ + + K +L+ YG+TETS P
Sbjct: 327 SIKACISGSAPLPLEV-QTSFEEKTKGRLVEGYGLTETS-------------------PV 366
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQ 295
A N+ +S + +G P P ++ V S ++ +G I+ +G VM YW++
Sbjct: 367 AAANLIWSSR---KNGSIGIPWPDTDMAVLSVENADIAEPNEIGEIMIKGPQVMKGYWNR 423
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
+ GE WL TGD+G +D+ G ++V R+ I +GG N+YP E+E VL +H I
Sbjct: 424 PEDTQATFKGE-WLLTGDMGYMDEDGFFYIVDRKKDMIIAGGFNIYPREIEEVLYEHEDI 482
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+G+ + E V A + L+E Q SE L ++CR K L
Sbjct: 483 QEACAIGVPDPYRGETVKAFIVLKEGRQVSEVE----------------LEEYCR-KQLA 525
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
+K PR+F +R P T GKI R + E S LK
Sbjct: 526 AYKIPRIFE-FRDELPKTMVGKILRRVLVEEEKSKLKK 562
>gi|403279578|ref|XP_003931324.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 4 [Saimiri boliviensis boliviensis]
Length = 645
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 190/397 (47%), Gaps = 58/397 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-----------APLCH- 117
I FTSGTTGSPKG +SH ++ S+ ++G + + LH PL H
Sbjct: 290 IQFTSGTTGSPKGATLSHYNIVNNSI----LIG---ERLKLHEKTPEKLRIVLPCPLYHC 342
Query: 118 IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
+G + M LM GA + P F K ALEA+ + L P + D+ +
Sbjct: 343 LGSVGGTMVCLMFGATLILSSPIFNGKKALEAISRERGGFLYGTPTMYVDILN----QPD 398
Query: 177 WKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 234
+ D S+ GG + EL++ N +L AYG TE +S +TFM L + T+E
Sbjct: 399 FSSYDISSMYGGTIGGSPVAPELVRAIMNKLNMKELTVAYGTTE-NSPVTFMCLPEDTVE 457
Query: 235 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWD 294
Q ++ G + P++ + + GK A EL G + RG VML YW
Sbjct: 458 ---QKAESVGRIMPHTEARIMNMEAGKLA---ELNT-------PGELFIRGYCVMLGYWG 504
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
+ V + W TGDI +D+ G +VGR I GGEN+YP E+E L HP
Sbjct: 505 EPRKTEEVVDQDKWYRTGDIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELEDFLHTHPK 564
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ + VVG+ + R+ E + AC+RL+ ES + E ++ C+ K +
Sbjct: 565 VQEVQVVGVKDDRMGEEICACIRLKSG---EES-------------TPEEIKAFCKGK-I 607
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ FK PR ++++ +PLT +GK+++ ++R ++ HL
Sbjct: 608 SHFKIPR-YIVFVTEYPLTISGKVQKFKLREQMERHL 643
>gi|229161918|ref|ZP_04289895.1| AMP-dependent synthetase and ligase [Bacillus cereus R309803]
gi|228621525|gb|EEK78374.1| AMP-dependent synthetase and ligase [Bacillus cereus R309803]
Length = 522
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 193/389 (49%), Gaps = 50/389 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
I +TSGTTG+PKGV+++H A +VQS I + + DV++ +APL HI G++ M
Sbjct: 173 ILYTSGTTGTPKGVMVTHRA-VVQSARTIGTELHCTQKDVFIISAPLFHIFGMAINMLCA 231
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ +G + KF + L+ +EQ VT VP + L K S++ L
Sbjct: 232 VAMGGRIILQEKFHPRETLQLIEQEKVTIQKGVPTMFIKELELEDFDKY--DLSSLRAGL 289
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G +P++ + E L ++G+TET S MT YD T + N+T
Sbjct: 290 VGAAPIPAKTVTEIRERM-GINLCQSFGITETVS--ITMTSYDDTKQ----------NIT 336
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
+GK P V LK+ D VG I +G VM Y++ V
Sbjct: 337 ET---------LGKAIPGVTLKIVDDNRVALPPGEVGEIAVKGFGVMKGYYNMPEQTNQV 387
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
E W +GD+G++D G + VGR+ I GG NVYP+E+EAV+++HP +I V+G
Sbjct: 388 LDNEDWYYSGDLGTLDFQGYLRFVGRKKEMIIRGGLNVYPQEIEAVIMKHPKVIEAAVIG 447
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + L E+ A +RL KN E+ E+ + + +E+ + +K P
Sbjct: 448 LPDKVLGEVACAVIRL---------------KNGEISTEEEI-KIYLKER-MAIYKLPEK 490
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
V++ + FP+T++GKI++ ++R +V +++
Sbjct: 491 -VIFTEDFPVTASGKIQKLKLREQVSTNI 518
>gi|359148032|ref|ZP_09181274.1| AMP-binding domain protein [Streptomyces sp. S4]
Length = 541
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 171/387 (44%), Gaps = 55/387 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ VGY E D P H G+ +A
Sbjct: 193 IQYTSGTTGFPKGATLSHHNILNNGYFVGENVGYTEQDRICLPVPFYHCFGMVMGNIAAT 252
Query: 129 MVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMA---DLATLIRVKKTWKGRDSVK 184
GAC V P F+ + L AV Q TSL VP + +LA T S++
Sbjct: 253 THGACIVIPGPVFDPVTTLTAVAQERCTSLYGVPTMFIGELNLADFASYDLT-----SLR 307
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E+MK A++ YGMTETS P +
Sbjct: 308 TGIMAGSPCPEEVMKRVVAEMHMAEVSICYGMTETS-------------------PVSTQ 348
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLA 298
+S+ G VG+ PH+E+KV G+ G + TRG VML YW++
Sbjct: 349 TRRDDSLAHRTGT-VGRVLPHLEVKVVDPGTGITVERGEAGELCTRGYSVMLGYWEEPER 407
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
W+ TGD+ + G V +VGR I GGEN+YP E+E L HP I +
Sbjct: 408 TAEAVDPAGWMHTGDLAVLRRDGYVEIVGRIKDMIIRGGENIYPREIEEFLYTHPKIADV 467
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG+ + + E V+ACV K L+ E LR CR++ L +K
Sbjct: 468 QVVGVPDGKYGEEVLACV---------------IPKQNAGPLTLEELRAFCRDR-LAHYK 511
Query: 419 AP-RLFVLWRKPFPLTSTGKIRRDEVR 444
P RL +L FP+T +GK+R+ E+R
Sbjct: 512 VPSRLQLL--DAFPMTVSGKVRKIELR 536
>gi|421470089|ref|ZP_15918496.1| AMP-binding enzyme [Burkholderia multivorans ATCC BAA-247]
gi|400228507|gb|EJO58436.1| AMP-binding enzyme [Burkholderia multivorans ATCC BAA-247]
Length = 575
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 205/457 (44%), Gaps = 69/457 (15%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADIL-------KGYSLRSLPFTHSWAPEG 66
EL+ +PSLR VS+G D AD++ +L +L T AP
Sbjct: 163 ELRAARVPSLRTVVSMG----DVAPPGMFRFADVIARGRASVDSAALDALGAT--LAPSD 216
Query: 67 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-M 125
+ I FTSGTTGSPKG ++H ++ + + + E D PL H G+ A +
Sbjct: 217 PINIQFTSGTTGSPKGATLTHRNVVNNARFIAMAMRFTEQDALCIPVPLYHCFGMVLAVL 276
Query: 126 AMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
A + GA VF + F+ + L AV + T+L VP + +A L + +++
Sbjct: 277 ACVSTGAAMVFPGEAFDPVATLAAVAEERCTALHGVPTMF--IAELDHPEFAKFDLSTLR 334
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E MK + +++ AYGMTETS P +F
Sbjct: 335 TGIMAGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSFQ 375
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 299
+ T + + + + VG+ PH+E+K+ V G + T+G VML YWD
Sbjct: 376 SSTDDPLEK-RTTTVGRVQPHLEVKIVDPSGEIVPVGVTGELCTKGYSVMLGYWDD---- 430
Query: 300 PSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
T EV W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I
Sbjct: 431 -DAKTREVLIDGWMHTGDLATLDAEGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKI 489
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
V G+ + + E + A + LR Q +E + +R C + +
Sbjct: 490 QSAQVFGVPDPKYGEELCAWIVLRADEQMAEDD----------------VRAFC-QGQIA 532
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+K PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 533 HYKIPR-YIRFVDELPMTVTGKVQKFVMRERMIDELK 568
>gi|334345488|ref|YP_004554040.1| long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
gi|334102110|gb|AEG49534.1| Long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
Length = 555
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 202/449 (44%), Gaps = 56/449 (12%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVIIC 71
E+ A+P LR V+LG + V + D L A D+ +L + + +P+ A+ +
Sbjct: 141 EIDPNAMPLLRIKVALGEEVQEGVLRWDDLRAEPDVPALTALEA-----ALSPDDAINVQ 195
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMV 130
FTSGTTG PKG ++H ++ + + D PL H G+ +A L
Sbjct: 196 FTSGTTGFPKGATLTHRNILNNAHFTGRTINLTNADRICIPVPLYHCFGMVLGNLAALTS 255
Query: 131 GACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GA V+ + ++ L+A+E T+L VP + +A L R +++ +
Sbjct: 256 GAAMVYPGEAYDPTLVLQAIEAEGCTALYGVPTMF--IAILARTDLDSYNVSTLRTGIMA 313
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P+ M++ + ++ YGMTETS T DP E G
Sbjct: 314 GAPCPATTMRQVMDQLNMREITIGYGMTETSPLTTQTATDDPLEERAG------------ 361
Query: 250 SVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVST 304
VG+ PH E K+ DG + G +RG VM YWD+
Sbjct: 362 --------TVGRVHPHAEAKIVGPDGKTLPIGEQGEYCSRGYAVMQGYWDEPERTAEAID 413
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
+ W+ +GD+ +D+ G + + GR + GGEN+YP E+E LL HP I V G+A
Sbjct: 414 ADGWMHSGDLAVMDEKGYIRITGRIKDMVIRGGENIYPREIEEFLLTHPQIQDAQVFGVA 473
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR-LF 423
+ +L E V A W ++ + LS + + HCR N+ +K PR +
Sbjct: 474 DEKLGEEVCA-------WVIAKPGAE---------LSVDGVLAHCR-GNIAHYKVPRHVR 516
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
V+ R FP+T TGK ++ ++R+ + + L+
Sbjct: 517 VVPR--FPMTVTGKAQKFQMRKMMETELR 543
>gi|111022097|ref|YP_705069.1| CoA synthetase [Rhodococcus jostii RHA1]
gi|110821627|gb|ABG96911.1| CoA synthetase [Rhodococcus jostii RHA1]
Length = 511
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 178/383 (46%), Gaps = 40/383 (10%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-M 127
++ ++SGTTG+PKGV++SH ++ +L ++ + L APL HIGG+ A+
Sbjct: 163 VLMYSSGTTGAPKGVMLSHGNMLWNALNQLLAQDMTSKERTLSVAPLFHIGGIGGAVTPT 222
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
L+ G V + KF++ L+ +E+ +T+ VP ++ +L R S++ I
Sbjct: 223 LLNGGTVVLLRKFDAGVVLDTIEKERITTFFAVPTMIQELWHHPRFADA--DLSSLRAIC 280
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G LP L+ + + AYG+TET+ S+T ++ D + + F T
Sbjct: 281 VAGAPLPEALISPWQDR--DVAITQAYGLTETAPSVTMLSSADVRTKIGSAGKRTF--FT 336
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
V +P G S + +G I+ +G +VML Y +Q A +
Sbjct: 337 DVDVVRPDG--------------SSAEPNEIGEIVAKGPNVMLGYLNQPEATARTIV-DG 381
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
WL TGD G DD G +++ R SGGENVYP EVEA LL+ GI V+G+ + +
Sbjct: 382 WLHTGDAGYFDDEGFLFICDRYKDMYISGGENVYPAEVEAALLKLDGIREAAVIGVPHEK 441
Query: 368 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 427
W E+ L E +R REK L GFK P F+
Sbjct: 442 ----------------WGETGMAFVVAADGTTLDEETVRARLREK-LAGFKIP-TFIQIA 483
Query: 428 KPFPLTSTGKIRRDEVRREVMSH 450
+ P T+TGKIR+ ++R+ S
Sbjct: 484 EALPRTATGKIRKPDLRKLAASQ 506
>gi|414172144|ref|ZP_11427055.1| hypothetical protein HMPREF9695_00701 [Afipia broomeae ATCC 49717]
gi|410893819|gb|EKS41609.1| hypothetical protein HMPREF9695_00701 [Afipia broomeae ATCC 49717]
Length = 524
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 182/387 (47%), Gaps = 44/387 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLS 122
PE I +TSGTTG PKGV ++H + S A G+ D L T PL HI G
Sbjct: 164 PEDVCIQMYTSGTTGHPKGVQLTHRNFSLTSPAVFDFWGHWTSSDTLLITMPLFHIAGAG 223
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+ + L+ G V + +F L++++ VT+ VPA++ LA L S
Sbjct: 224 TGILGLLAGMKIVVLREFVPSQVLQSIQHDRVTASFFVPAMI--LALLSEKNIDQINTSS 281
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
+K+++ G +P +L+K A F + + YG+TET+ LT + LP+
Sbjct: 282 LKRVIYGASPIPIDLLKSALRVFRQTAFVQVYGLTETTGVLTAL------------LPED 329
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFL 297
+ + C G+ VEL++ + VG ++ R A M+ YW++
Sbjct: 330 HSRIDSEVMKS----C-GRAIDGVELRIVDALGAPLPPREVGEVVCRTAKNMVGYWNRHD 384
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
GE WL TGD G +D+ G +++ R I SGGEN+YP E+E+VL HP +
Sbjct: 385 DTAKTLKGE-WLHTGDAGYLDENGYLYIHDRIKDMIVSGGENIYPAEIESVLFSHPDVAD 443
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
I V+G+ + R E V A V Q + ++ D +LR + RE+ L G+
Sbjct: 444 IAVIGVPDERWGEAVKALV---VPMQNAVADADS------------ILR-YARER-LAGY 486
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVR 444
K P+ + + P +GKI + ++R
Sbjct: 487 KIPK-SIEFLSEMPRNPSGKILKRKLR 512
>gi|433463137|ref|ZP_20420702.1| long-chain-fatty-acid--CoA ligase [Halobacillus sp. BAB-2008]
gi|432187919|gb|ELK45153.1| long-chain-fatty-acid--CoA ligase [Halobacillus sp. BAB-2008]
Length = 518
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 187/389 (48%), Gaps = 42/389 (10%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AML 128
I +TSGTTGSPKGV+ SH +I Q+L A + ++D L AP+ H L A +
Sbjct: 166 IMYTSGTTGSPKGVIHSHRDMIDQALIMTACLRLTKEDRGLTVAPIFHCAELHCAFFPRV 225
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
M+GA +V + FE++ +E V+Q +T L P + ++ + + + ++++ L
Sbjct: 226 MIGAANVIMHHFEAEELIETVKQEQITCLFAAPTM---WNMVLEEEFSAEDFQTLRQGLY 282
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
GG + L K ++ +L+ AYGMTE ++T + + + + G +A N
Sbjct: 283 GGAPMAPSLTKRLHDAL-GVELLQAYGMTEMGPAITAL-MDEEQVRKAGSAGRALLN--- 337
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV- 307
H + V + P ++C +G I+ RG +M Y++ +P T EV
Sbjct: 338 ---HDVRVVRTNEHGPAEPNEICK--PFELGEIIVRGPSMMTAYYN----RPE-ETEEVL 387
Query: 308 ---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
W TGDIGS D+ G +W+ R I SGGEN+Y EVE VL HPG++ VVG
Sbjct: 388 YKGWYHTGDIGSFDEEGYLWVRDRVKDMILSGGENIYSREVEDVLFDHPGVLDAAVVGEP 447
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE-KNLTGFKAPRLF 423
+ E VVA + K +SSE L C L FK PR +
Sbjct: 448 DEMWGERVVAFI-----------------VRKGDPVSSEELDAFCTSGGRLARFKRPRRY 490
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
V + P ++GK+++ ++R E + L+
Sbjct: 491 VFMEE-LPRNASGKLQKFKLREERTAMLE 518
>gi|386058544|ref|YP_005975066.1| AMP-binding protein [Pseudomonas aeruginosa M18]
gi|347304850|gb|AEO74964.1| AMP-binding domain protein [Pseudomonas aeruginosa M18]
Length = 564
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 177/392 (45%), Gaps = 47/392 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ +G G +D + PL H G + + +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLGAEDRLVIPVPLYHCFGMVMGNLGCV 265
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ P F++++ L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTMIYPAPSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 324 MAGATCPIEVMRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E K+ +G + TRG VML YW+ A
Sbjct: 374 ----------TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEA 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ TGD+ +DD G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDPARWMRTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + R E +VA ++L + E LR C+ + + FK PR
Sbjct: 484 IPDERYGEEIVAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRH 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
F + FP+T TGKI++ +R + ++ L
Sbjct: 527 FKFVDE-FPMTVTGKIQKFRMREISIEEIRLL 557
>gi|330815048|ref|YP_004358753.1| AMP-binding protein [Burkholderia gladioli BSR3]
gi|327367441|gb|AEA58797.1| AMP-binding domain protein [Burkholderia gladioli BSR3]
Length = 588
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 203/451 (45%), Gaps = 59/451 (13%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILK-GYSLRSLP----FTHSWAPEGAVI 69
L +P+LR VS+ + + + D D+L G +LR A +
Sbjct: 177 LHAARLPALRAVVSMSEAPPAGMLRFD----DVLAHGRTLREHAGLDVLGAGLADTDPIN 232
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAML 128
I FTSGTTGSPKG ++H ++ + A ++ E D PL H G+ S +A +
Sbjct: 233 IQFTSGTTGSPKGATLTHRNVVNNARAIARVMRLTEQDALCIPVPLYHCFGMVLSVLASV 292
Query: 129 MVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
VGA VF F+ L AVE T+L VP + +A L + +++ +
Sbjct: 293 SVGAKMVFPGAAFDPLVTLAAVEAERCTALQGVPTMF--IAELDHPEFKRFDLGTLRTGI 350
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E MK A++ AYGMTETS ++F + D TLE
Sbjct: 351 MAGSPCPIETMKRVVAEMHMAEVTIAYGMTETSP-VSFQSTTDDTLEK------------ 397
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAKPS 301
+ VG+ PH+E K+ + V G + TRG VM YW D+ L + +
Sbjct: 398 -------RTTTVGRIQPHLEAKIVDAEGAIVPVGATGELCTRGYAVMAGYWGDEALTRRA 450
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ G W+ TGD+ + D+ G +VGR + GGEN+YP E+E L +HP I V
Sbjct: 451 IVDG--WMHTGDLATFDEEGFCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSAQVF 508
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E V A + LR E E LR CR + + +K PR
Sbjct: 509 GVPDPKYGEEVCAWIVLRAGEAMDE----------------EELRDFCRGQ-IAHYKVPR 551
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+V + + P+T TGK+++ +R ++ L+
Sbjct: 552 -YVRFVEALPMTVTGKVQKFVMRDAMIDELR 581
>gi|46199367|ref|YP_005034.1| long-chain-fatty-acid-CoA ligase [Thermus thermophilus HB27]
gi|46196992|gb|AAS81407.1| long-chain-fatty-acid-CoA ligase [Thermus thermophilus HB27]
Length = 548
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 186/386 (48%), Gaps = 50/386 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGE-DDVYLHTAPLCHIGGLSSAMAM-L 128
+T GTTG KG +++H L +L A I + E ++V L P H+ G++ AM + L
Sbjct: 203 YTGGTTGLAKGAMLTHRNLSANALQVRAWIPDFREGEEVVLGAIPFFHVYGMTVAMNLAL 262
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ GA V +P+ E K+ +EA+E+H VT VP + +++ + SV+ ++
Sbjct: 263 LGGAKLVLLPRPEIKAIVEAIEKHQVTLFPGVPTLYVAFNNFPGIER--RDLKSVRACIS 320
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G LP E+ E AKL+ YG+TE S LY G+ + G+
Sbjct: 321 GSAPLPLEVA-ERFERLTGAKLVEGYGLTEASPVTHCNPLY-------GE--RRLGS--- 367
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVS 303
VG P P V+ KV + VG + +G +VM YW++ + +
Sbjct: 368 ----------VGLPFPGVDAKVVDEEGRELPPGEVGELAVKGPNVMKGYWNR-PEETQKT 416
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ WL TGD+ +D G ++V R+ I +GG N+YP EVE VL QH + VVG+
Sbjct: 417 LKDGWLFTGDLAKMDQDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQEAAVVGV 476
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ E V A + L+ +Q S D + + CR+ NL +K PR+
Sbjct: 477 PDPYRGETVAAFLVLKPEYQGKVSEKD--------------IERFCRQ-NLAAYKVPRI- 520
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMS 449
+ +R+ P +S GKI + E+++EV +
Sbjct: 521 IQFRESLPKSSVGKILKRELQKEVAA 546
>gi|120401958|ref|YP_951787.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
gi|119954776|gb|ABM11781.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
Length = 511
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 180/386 (46%), Gaps = 46/386 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ V++ +TSGTTG+PKGV++S++ + ++ + D V L PL H+ G
Sbjct: 155 PDDVVLLMYTSGTTGAPKGVMLSNTNYVYKTGGVAGPWQFDADAVSLAVMPLFHMAGSGW 214
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
A+A L GA V + E + L+A+ +H +T+++ VPA++ L V + ++
Sbjct: 215 ALAGLWQGATTVVLRDVEPAAILDAIARHRITNMLLVPAVIQFLLDTDGVAEV--DLSTL 272
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ I+ G + +++ F YGMTET+ S+T L+ P +P
Sbjct: 273 RVIVYGASPISDDVLVRGIERF-GPIFAQVYGMTETTGSIT-------QLDGPDHVPALL 324
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLA 298
+ C G+P P V++++ + + VG + TR ML YW+ A
Sbjct: 325 RS------------C-GRPYPWVQIRIVDETGADAVAGTVGEVWTRSEQNMLGYWNNPDA 371
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
S T + WL TGD G +DD G ++L R I SGGENVYP EVE VL+ HP +
Sbjct: 372 TASTLTADGWLKTGDAGYVDDDGYLFLHDRIKDMIVSGGENVYPVEVENVLMTHPAVADA 431
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+G+ + R W E+ + L+ L R++ + GFK
Sbjct: 432 AVIGVPDRR----------------WGEAVKAVVVAARGAQLTEAELIAFARDR-IGGFK 474
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVR 444
P+ V + P +GK+ + +R
Sbjct: 475 LPK-SVDFVDVLPRNPSGKLLKRALR 499
>gi|355642303|ref|ZP_09052704.1| hypothetical protein HMPREF1030_01790 [Pseudomonas sp. 2_1_26]
gi|354830374|gb|EHF14420.1| hypothetical protein HMPREF1030_01790 [Pseudomonas sp. 2_1_26]
Length = 564
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 177/392 (45%), Gaps = 47/392 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ +G G +D + PL H G + + +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLGAEDRLVIPVPLYHCFGMVMGNLGCV 265
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ P F++++ L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTMIYPAPSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 324 MAGATCPIEVMRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E K+ +G + TRG VML YW+ A
Sbjct: 374 ----------TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEA 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ TGD+ +DD G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDPARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + R E +VA ++L + E LR C+ + + FK PR
Sbjct: 484 IPDERYGEEIVAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRH 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
F + FP+T TGKI++ +R + ++ L
Sbjct: 527 FKFVDE-FPMTVTGKIQKFRMREVSIEEIRLL 557
>gi|228959259|ref|ZP_04120955.1| AMP-dependent synthetase and ligase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228800457|gb|EEM47378.1| AMP-dependent synthetase and ligase [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 522
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 193/389 (49%), Gaps = 50/389 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLS-SAMAM 127
I +TSGTTG+PKGV+++H A +VQS I + + DV++ +APL HI G++ + +
Sbjct: 173 ILYTSGTTGTPKGVMVTHRA-VVQSARTIGTELHCTQKDVFIISAPLFHIFGMAINMLCA 231
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ +G + KF + L+ +EQ VT VP + L K S++ L
Sbjct: 232 VAMGGRFILQEKFHPRETLQLIEQEKVTIQKGVPTMFIKELELEDFDKY--NLSSLRAGL 289
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G +P++ + E L ++G+TET S M+ YD T E N+T
Sbjct: 290 VGAAPIPAKTVTEIRERM-GINLCQSFGITETVS--ITMSSYDDTKE----------NIT 336
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
+GK P V LK+ + VG I +G VM Y++ V
Sbjct: 337 ET---------LGKAIPGVTLKIVDENRVALPPGEVGEIAVKGFGVMKGYYNMPEQTNQV 387
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
E W +GD+G++D G + VGR+ I GG NVYP+E+EAV+++HP +I V+G
Sbjct: 388 LDNEEWYYSGDLGTLDSQGYLRFVGRKKEMIIRGGLNVYPQEIEAVIMKHPKVIEAAVIG 447
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + L E+ A +RL KN E+ E+ + + +E+ + +K P
Sbjct: 448 LPDKVLGEVACAVIRL---------------KNGEISTEEEI-KIYLKER-MAIYKLPEK 490
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
V++ FP+T++GKI++ +++ +V S++
Sbjct: 491 -VIFTDEFPVTASGKIQKLKLKEQVSSNI 518
>gi|153832529|ref|ZP_01985196.1| long-chain-fatty-acid--CoA ligase [Vibrio harveyi HY01]
gi|148871324|gb|EDL70196.1| long-chain-fatty-acid--CoA ligase [Vibrio harveyi HY01]
Length = 521
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 189/383 (49%), Gaps = 50/383 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG +SH+ ++ +++ ++ D + T PL H G + M A
Sbjct: 168 VILYTSGTTGQPKGAELSHTNMLTNAMSSQYLMRLEYSDTTMATLPLFHSFGQTVMMNAS 227
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
++ G+ V IP+FE K +E + QH V+ VP + +A L +++ + + VK L
Sbjct: 228 VLTGSTMVLIPRFEPKFVIEQIIQHKVSVFAGVPTMY--IALLRAGEQSPEHSELVKHSL 285
Query: 188 ----NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+GG +P E++++ F + ++ YG++ET+ TF +
Sbjct: 286 RLGVSGGASMPVEVIRQFEQRF-ELPVLEGYGLSETAPVATFNHID-------------- 330
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 303
G+ P SV QP V K A ++K + +G + + VM Y+ +P +
Sbjct: 331 GDRLPGSVGQPLCGYVIKIA---DVKGHAQAVGELGEVCIKSPSVMKGYY----GRPEAT 383
Query: 304 TGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+ W TGDIG +D+ GN+++V R I GG NVYP E+E VL+ HP + + V
Sbjct: 384 RDALRDGWFLTGDIGRVDEHGNLFIVDRVKDMIIRGGYNVYPREIEEVLMCHPDVEMVAV 443
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VG + RL E V A V L + +++C + L CRE+ L +K P
Sbjct: 444 VGEHDDRLGEEVHAHVVLHQ-----DAHC-----------CPDTLIAWCREQ-LADYKYP 486
Query: 421 RLFVLWRKPFPLTSTGKIRRDEV 443
R V RK P+T+TGKI + E+
Sbjct: 487 RR-VFIRKALPMTATGKILKREL 508
>gi|84495288|ref|ZP_00994407.1| putative acyl-CoA synthetase [Janibacter sp. HTCC2649]
gi|84384781|gb|EAQ00661.1| putative acyl-CoA synthetase [Janibacter sp. HTCC2649]
Length = 550
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 180/397 (45%), Gaps = 49/397 (12%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGL 121
+P+ A+ I +TSGTTG PKG +SH ++ I GY E D P H G +
Sbjct: 184 SPDDAINIQYTSGTTGFPKGATLSHRNILNNGYMVGEICGYTEVDRICIPVPFYHCFGMV 243
Query: 122 SSAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+A GAC V P F+ L A + TSL VP + L +
Sbjct: 244 MGNLAATTHGACMVIPAPGFDPNLTLTATAEEKCTSLYGVPTMFIAEWALPNLGD--YDL 301
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
+V+ + G P+ELMK+ S I AYGMTETS P
Sbjct: 302 STVRTGIMAGSPCPAELMKKLIASGIDEMTI-AYGMTETS-------------------P 341
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 294
+ +T + + G VG+ PH+E+K+ + G T+G VML YW
Sbjct: 342 VSTQTLTDDDFDRKVGT-VGQVGPHLEVKIVDPVTLETLPHGEPGEFWTKGYSVMLGYWG 400
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
Q K + + + W+ TGD+ +DD G + + GR + GGEN+YP E+E L HP
Sbjct: 401 QD-DKTAEALVDGWMRTGDLAVMDDAGFLQITGRIKDMVIRGGENIYPREIEEFLYTHPD 459
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
I+ V+G+ + + E + A +R+R+ Q L++E +R K L
Sbjct: 460 IVDAQVIGVPDEKYGEELAAWIRMRDGAQ---------------PLTAETVRAFATGK-L 503
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+K PR +V + FP+T TGK+R+ E+R ++ L
Sbjct: 504 AHYKVPR-YVRIVEDFPMTVTGKVRKVEMREITVAEL 539
>gi|397735239|ref|ZP_10501938.1| feruloyl-CoA synthetase [Rhodococcus sp. JVH1]
gi|396928780|gb|EJI95990.1| feruloyl-CoA synthetase [Rhodococcus sp. JVH1]
Length = 511
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 178/383 (46%), Gaps = 40/383 (10%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-M 127
++ ++SGTTG+PKGV++SH ++ +L ++ + L APL HIGG+ A+
Sbjct: 163 VLMYSSGTTGAPKGVMLSHGNMLWNALNQLLAQDMTSKERTLSVAPLFHIGGIGGAVTPT 222
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
L+ G V + KF++ L+ +E+ +T+ VP ++ +L R S++ I
Sbjct: 223 LLNGGTVVLLRKFDAGVVLDTIEKERITTFFAVPTMIQELWHHPRFADA--DLSSLRAIC 280
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G LP L+ + + AYG+TET+ S+T ++ D + + F T
Sbjct: 281 VAGAPLPEALISPWQDR--DVAITQAYGLTETAPSVTMLSSADVRTKIGSAGKRTF--FT 336
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
V +P G S + +G I+ +G +VML Y +Q A +
Sbjct: 337 DVDVVRPDG--------------SSAEPNEIGEIVAKGPNVMLGYLNQPEATARTIV-DG 381
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
WL TGD G DD G +++ R SGGENVYP EVEA LL+ GI V+G+ + +
Sbjct: 382 WLHTGDAGYFDDEGFLFICDRYKDMYISGGENVYPAEVEAALLKLDGIREAAVIGVPHEK 441
Query: 368 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 427
W E+ L E +R REK L GFK P F+
Sbjct: 442 ----------------WGETGMAFVVAADGTTLDEETVRARLREK-LAGFKIP-TFIQIA 483
Query: 428 KPFPLTSTGKIRRDEVRREVMSH 450
+ P T+TGKIR+ ++R+ S
Sbjct: 484 EALPRTATGKIRKPDLRKLAASQ 506
>gi|399053605|ref|ZP_10742404.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. CF112]
gi|433546213|ref|ZP_20502546.1| long-chain-fatty-acid--CoA ligase [Brevibacillus agri BAB-2500]
gi|398048382|gb|EJL40854.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. CF112]
gi|432182483|gb|ELK40051.1| long-chain-fatty-acid--CoA ligase [Brevibacillus agri BAB-2500]
Length = 552
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 129/482 (26%), Positives = 214/482 (44%), Gaps = 83/482 (17%)
Query: 1 MLVTDESSDSWYLE----------------LQHTAIPSLRWHVSLGSSSS-------DFV 37
+L+ D D+ YLE L +P+LR V LG D +
Sbjct: 108 LLLIDGYRDANYLEMIREICPELATCEPGALVSKRLPNLRNVVYLGEERQPGMFLWKDLL 167
Query: 38 NKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAK 97
+ ++++ + + LR S + + + + +TSGTTG PKGV++SH ++ ++
Sbjct: 168 ERAELVSEEEQR---LRQ----ESLSFDDVINMQYTSGTTGFPKGVMLSHVNIVNNAIKV 220
Query: 98 IAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTS 156
G G DD P H G + +A + GA V + F+ L VE T+
Sbjct: 221 AECQGLGVDDRVCIPVPFFHCFGCVMGTLACVATGATMVPVIAFDPGLVLSIVEAERCTA 280
Query: 157 LITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISA 213
L VP + +A+L T++ RD S++ + G P E+MK+ + + A
Sbjct: 281 LYGVPTMFIAELN-----HPTFEQRDLSSLRTGIMAGSLCPIEVMKKVVDKMGIRDITIA 335
Query: 214 YGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD 273
YG TE+S +T P + + VG+ VE K+ +
Sbjct: 336 YGQTESSPVIT--------------------QTRPEDSIERKVSTVGRLHEGVEAKIINP 375
Query: 274 GSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVG 327
+ + G + TRG VM Y++ E WL TGD+ ++D+ G + G
Sbjct: 376 ATGEIVPPGVQGELCTRGYLVMKGYYNMPDQTAKAIDEEGWLHTGDLATVDEEGYYRITG 435
Query: 328 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 387
R I GGEN+YP EVE L HP I+ + +VG+ +A+ E V+AC+R+
Sbjct: 436 RLKDMIIRGGENIYPREVEEFLYTHPKILDVQIVGVPDAKYGEQVLACIRV--------- 486
Query: 388 NCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 447
K E L EVL +C E + FK PR ++ + +P+T++GKI++ ++R +
Sbjct: 487 ------KPGETLTEEEVL-AYC-EGKIARFKTPR-YIQFVDEYPMTASGKIQKFKLREQA 537
Query: 448 MS 449
++
Sbjct: 538 LA 539
>gi|393199978|ref|YP_006461820.1| acyl-CoA synthetase/AMP-acid ligase II [Solibacillus silvestris
StLB046]
gi|406665757|ref|ZP_11073528.1| Long-chain-fatty-acid--CoA ligase [Bacillus isronensis B3W22]
gi|327439309|dbj|BAK15674.1| acyl-CoA synthetase/AMP-acid ligase II [Solibacillus silvestris
StLB046]
gi|405386276|gb|EKB45704.1| Long-chain-fatty-acid--CoA ligase [Bacillus isronensis B3W22]
Length = 563
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 187/399 (46%), Gaps = 55/399 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSL---AKIAIVGYGEDDVYLHTAPLCHIGGLSSAM 125
++ +T GTTG PKGV+++H LI +L A + GE+ + L P H+ G+++ +
Sbjct: 210 LLQYTGGTTGYPKGVMLTHKNLIANTLMCDAWMYKCKKGEETI-LGILPFFHVYGMTTVL 268
Query: 126 AM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ +M V +PKF+++ AL+ +++ T P + L + K S+K
Sbjct: 269 ILSVMQQGKMVLLPKFDAEQALKTIDKQKPTLFPGAPTMYIGLLNHPDLAKY--DLSSIK 326
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
L+G LP E+ +E +L+ YG+TETS ++D
Sbjct: 327 ACLSGSAALPLEV-QEKFEELTGGRLVEGYGLTETSPVTHANPIWD-------------- 371
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 298
H+ G +G P P+ E + G S V G I +G VM YW++
Sbjct: 372 -------HRING-SIGLPWPNTEAVILRSGESEVLPVGEIGEIAVKGPQVMKGYWNR-PE 422
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ +++ + W TGD+G +D+ G ++V R+ I +GG N+YP EVE VL +H +
Sbjct: 423 ETAMTFADGWFLTGDLGYMDEKGYFYVVDRKKDMIIAGGFNIYPREVEEVLYEHEAVQEC 482
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
+V GI + E V A + L+E +S +KE L ++CR KNL +K
Sbjct: 483 IVAGIPDPYRGETVKAYIVLKEG---------KSVTDKE-------LNEYCR-KNLAAYK 525
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 457
PR F +R+ P T+ GKI R + E + +N
Sbjct: 526 VPR-FYEFRQELPKTAVGKILRRTLIEEEKQKMAQQEAN 563
>gi|375141237|ref|YP_005001886.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359821858|gb|AEV74671.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 545
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 175/396 (44%), Gaps = 47/396 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P V I +TSGTTGSPKG +SH ++ ++ G + P H G+
Sbjct: 185 PGDPVNIQYTSGTTGSPKGATLSHRNILNNGFFVTELIKLGPGERLCIPVPFYHCFGMVM 244
Query: 124 AMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
A + IP F+ +AL AVE+ T+L VP + +A L
Sbjct: 245 ANLGCTTHGATMVIPAAGFDPAAALAAVEKERCTALYGVPTMF--IAMLGHPDLGEHDLS 302
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P ELMK + ++L AYGMTETS ++ TL D L+
Sbjct: 303 SLRTGIMAGATCPMELMKRCVSELNMSELAIAYGMTETSP-VSCQTLIDDDLDR------ 355
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 295
+ VG+ PHVE+++ + + G TRG VML YWD
Sbjct: 356 -------------RTATVGRAHPHVEIRIVDPETGRITKRGEPGEFCTRGYSVMLGYWDD 402
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
+ W+ TGD+ + D G ++GR + GGENVYP EVE L HP I
Sbjct: 403 DDRTREAVDSDGWMRTGDLAVMRDDGYCMIIGRIKDMVIRGGENVYPREVEEFLHTHPDI 462
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ V+G+ + + E + A +R+R + C L ++ +R + L
Sbjct: 463 DDVQVIGVPDTKYGEEICAWIRMR-------AGCTP--------LDADGVRAFASGR-LA 506
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+K PR +V FP+T TGK+R+ ++R E + L
Sbjct: 507 HYKIPR-YVHIVDEFPMTVTGKVRKVDMRTETVRLL 541
>gi|427783845|gb|JAA57374.1| Putative acyl-coa synthetase family member 2 [Rhipicephalus
pulchellus]
Length = 594
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 194/411 (47%), Gaps = 55/411 (13%)
Query: 46 DILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE 105
DI++G ++ + + + I FTSGTTG+PK ++SH + S+ E
Sbjct: 220 DIVQGGNVNLAEAENKVGMDDPITIVFTSGTTGTPKAAMLSHHGFVNNSIMYDHGAPDPE 279
Query: 106 DDVYLHTAPLCHIGGLSSAMAMLMV-GACHVFIP--KFESKSALEAVEQHCVTSLITVPA 162
+ P H+ G++ M + ++ G C V +P +++K L+++ + + + P
Sbjct: 280 RSILCSPLPFFHVFGMTITMGLTVIRGNCAV-VPCAGYDTKEILKSIHNYRCSQVAGAPT 338
Query: 163 IMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETS 220
++AD+ +K D S+ +++ GG + E+ K A F KA + YG TET+
Sbjct: 339 MIADMIN----HPDFKSFDLSSLNRVVMGGNVVTPEMRKLAKEKF-KAHVWVGYGATETT 393
Query: 221 SSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS----- 275
++ T +T DP Q VG+P +VE+KV +
Sbjct: 394 TASTLVTERDP--------------------ESKQATTVGRPVGYVEVKVADPATGKETA 433
Query: 276 -SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIK 334
+ G + RG +V + Y++ V W TGD+G +D+ G + ++GR +
Sbjct: 434 INEPGEVWVRGHNVFIGYYNDEEKTKEVKGPAGWYKTGDLGKMDEDGYLSIIGRLKDMVI 493
Query: 335 SGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSK 394
GGEN+YP E+E VL HP I V+G+ ++R+ E + A V L + ++S
Sbjct: 494 RGGENIYPLEIEEVLETHPAIQECHVIGVPDSRMGEELCAWVLLNPGSKVTDSE------ 547
Query: 395 NKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
L+Q+C+ K L+ FK P+ F L+ +P T+ GK +++++R
Sbjct: 548 ----------LQQYCKGK-LSHFKIPKYF-LYETDYPKTAIGKAQKNKMRE 586
>gi|398841820|ref|ZP_10599027.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM102]
gi|398107306|gb|EJL97309.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM102]
Length = 564
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 198/450 (44%), Gaps = 49/450 (10%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICF 72
+LQ +P LR +SL + LT D+ S+ L S + AV I +
Sbjct: 156 QLQSERLPELRGVISLDAQPPSGFLPWSQLT-DLAASVSVEQLRERQDSLHFDQAVNIQY 214
Query: 73 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGA 132
TSGTTG PKG +SH ++ +G +D + PL H G+ +
Sbjct: 215 TSGTTGFPKGATLSHYNILNNGYMVGESLGLTANDRLVIPVPLYHCFGMVMGNLGCVTHG 274
Query: 133 CHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
+ P F+ L V + T+L VP + +A L + K+ S++ + G
Sbjct: 275 STMIYPNDAFDPLLTLSTVAEEKATALYGVPTMF--IAMLDQPKRAEFDLSSLRTGIMAG 332
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P E+M+ N +++ AYGMTETS +L+T P+
Sbjct: 333 ATCPIEVMRRVINEMHMSEVQIAYGMTETSPV---------SLQT-----------GPSD 372
Query: 251 VHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTG 305
+ + VG+ P +E K+ + + V G + TRG VML YW+
Sbjct: 373 ELELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDE 432
Query: 306 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 365
W+ TGD+ S++D G V + GR I GGEN+YP E+E HP + + V+GI
Sbjct: 433 AGWMHTGDLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPC 492
Query: 366 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 425
+R E +VA W + + S+ +E L+ C+E+ + FK PR F
Sbjct: 493 SRYGEEIVA---------WIKFHPGHSATEQE-------LQAWCKER-IAHFKTPRYFKF 535
Query: 426 WRKPFPLTSTGKIRRDEVRREVMSHLKSLP 455
+ FP+T TGKI++ +R + LK++P
Sbjct: 536 VEE-FPMTVTGKIQKFRMREISIEVLKAIP 564
>gi|116671612|ref|YP_832545.1| AMP-dependent synthetase and ligase [Arthrobacter sp. FB24]
gi|116611721|gb|ABK04445.1| AMP-dependent synthetase and ligase [Arthrobacter sp. FB24]
Length = 558
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 202/471 (42%), Gaps = 66/471 (14%)
Query: 4 TDESSDSWYLELQH-TAIPSLRWHVSLGS------SSSDFVNKRDMLTADILKGYSLRSL 56
+D SSD + Q A P L+ V L + D +M A++LK R+
Sbjct: 129 SDRSSDYTAMARQALAACPELKELVFLPDGGQPQLQAGDPETAAEMTYAELLK----RAD 184
Query: 57 PFTHS--------WAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDV 108
HS P+ + + +TSGTTG PKG ++H ++ + ++GY E D
Sbjct: 185 DVGHSVLKARLAGLDPQDPINLQYTSGTTGFPKGATLTHRNILNNGYSIGELLGYTEHDR 244
Query: 109 YLHTAPLCHIGGLSSAMAMLMVGACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMAD 166
+ P H G+ + IP F +ALEAV+ TSL VP +
Sbjct: 245 VVIPVPFYHCFGMVIGNLNALSHGAATIIPGRTFTPAAALEAVQDFGGTSLYGVPTMF-- 302
Query: 167 LATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM 226
+A L +++ + G P E+M + + YGMTETS T M
Sbjct: 303 IAELALPDFASYDLSTLRTGVMAGSLCPIEVMNRVISDMNMKDVAICYGMTETSPVST-M 361
Query: 227 TLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GR 280
T D TL Q + VG+ P +E +V + V G
Sbjct: 362 TRADDTL-------------------QQRTETVGRTMPQLESQVVDPATGEVLERGEIGE 402
Query: 281 ILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENV 340
+ TRG VM YW+Q + W+ TGD+ +D G V + GR + GGEN+
Sbjct: 403 LCTRGYAVMKGYWNQPDKTAEAIDPDGWMHTGDLARMDADGYVVIEGRIKDMVIRGGENI 462
Query: 341 YPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLL 400
YP E+E L HP I + V+G+ +A+ E ++AC+ ++ L
Sbjct: 463 YPREIEEFLYTHPSIQDVQVIGVPDAKYGEELMACIIVKPGAD---------------PL 507
Query: 401 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ + + CR K L +K PR +V R FP+T +GKIR+ E+R+E ++ L
Sbjct: 508 DAADVAEFCRGK-LAHYKIPR-YVEVRDSFPMTVSGKIRKVEMRQEAVARL 556
>gi|421167427|ref|ZP_15625616.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 700888]
gi|404534460|gb|EKA44194.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 700888]
Length = 564
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 177/392 (45%), Gaps = 47/392 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ +G G +D + PL H G + + +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLGAEDRLVIPVPLYHCFGMVMGNLGCV 265
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ P F++++ L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTMIYPAPSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 324 MAGATCPIEVMRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E K+ +G + TRG VML YW+ A
Sbjct: 374 ----------TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEA 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ TGD+ +DD G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDPARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + R E +VA ++L + E LR C+ + + FK PR
Sbjct: 484 IPDERYGEEIVAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRH 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
F + FP+T TGKI++ +R + ++ L
Sbjct: 527 FKFVDE-FPMTVTGKIQKFRMREVSIEEIRLL 557
>gi|383315473|ref|YP_005376315.1| acyl-CoA synthetase [Frateuria aurantia DSM 6220]
gi|379042577|gb|AFC84633.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Frateuria
aurantia DSM 6220]
Length = 569
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 180/394 (45%), Gaps = 51/394 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMA 126
V I FTSGTTG+PKG ++H ++ + E D P H G+ MA
Sbjct: 211 VNIQFTSGTTGAPKGATLTHHNIVNNGFFIGEAMQLTEADRLCIPVPFYHCFGMVLGNMA 270
Query: 127 MLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ GAC V IP F+ + L+AV T+L VP + +A L + S++
Sbjct: 271 AVTHGACMV-IPGEGFDVLATLQAVAAERCTALHGVPTMF--IAELEHPRFHEFDLSSLR 327
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E+M+ N + AYGMTETS P +F
Sbjct: 328 TGIMAGSTCPIEVMRRVVNEMHMRDITIAYGMTETS-------------------PVSFQ 368
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 298
++ + + + + VG+ PH+E+K+ D H+ G + TRG VML YWD +
Sbjct: 369 SIPADPLAR-RVESVGRVHPHLEVKLV-DELGHIVPRGVPGELCTRGYSVMLGYWDDRIR 426
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
W+ TGD+ +DD G +VGR I GGEN+YP E+E L HP I +
Sbjct: 427 TAEAIDRGGWMHTGDLAVLDDEGYARIVGRLKDMIIRGGENIYPREIEEFLYTHPAIKDV 486
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
+ G+A+ R E V A ++LRE C S E L+ +CR +++ +K
Sbjct: 487 QIFGVADQRFGEQVCAWIQLRE-------GCTT---------SVEELQHYCR-RHIAYYK 529
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
P + + FP+T TGK+++ +R + LK
Sbjct: 530 VPH-HIRFVDSFPMTVTGKVQKYLMRETMERELK 562
>gi|339326069|ref|YP_004685762.1| acyl-CoA synthetase [Cupriavidus necator N-1]
gi|338166226|gb|AEI77281.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Cupriavidus
necator N-1]
Length = 574
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 208/450 (46%), Gaps = 56/450 (12%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILK---GYSLRSL-PFTHSWAPEGAVI 69
ELQ +P+LR + +G + + + AD++ G + +L T +
Sbjct: 163 ELQAARLPALRCVIRMGDDHTPGM----LRYADVIARGTGVARATLDAITAQLDRHDPIN 218
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
+ FTSGTTG+PKG ++H ++ + + + E D P H G+ A +A +
Sbjct: 219 VQFTSGTTGAPKGATLTHRNIVNNARFIAMAMRFSEQDKLCIPVPFYHCFGMVLAVLACV 278
Query: 129 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA VF + FE ++ ++AV + T+L VP + +A L + S++ +
Sbjct: 279 SSGAAMVFPGQAFEPEATMQAVSEERCTALHGVPTMF--IAQLDHPNFSQYDFSSLRTGI 336
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E MK + +++ AYGMTETS P +F + T
Sbjct: 337 MAGSPCPIETMKRVVSQMHMSEVTIAYGMTETS-------------------PVSFQSST 377
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 302
+ + + + VG+ PH+E+++ + V G + TRG VML YWD A+ +
Sbjct: 378 TDPLDK-RTTTVGRIQPHLEVRIVDATGATVPVGETGELCTRGYSVMLGYWDD-EARTAE 435
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ + W+ TGD+ +ID G +VGR + GGEN+YP E+E L +HP + + V G
Sbjct: 436 AIRDGWMHTGDLATIDAEGYCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFG 495
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + + E V A + L+ +E +R CR++ + +K PR
Sbjct: 496 VPDQKYGEEVCAWIVLKPGASATEDE----------------IRDFCRDQ-IAHYKIPR- 537
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
++ + P+T TGK+++ +R + LK
Sbjct: 538 YIRFVDEMPMTITGKVQKFVMRERMTRDLK 567
>gi|329937490|ref|ZP_08287048.1| O-succinylbenzoate-CoA ligase [Streptomyces griseoaurantiacus M045]
gi|329303366|gb|EGG47253.1| O-succinylbenzoate-CoA ligase [Streptomyces griseoaurantiacus M045]
Length = 512
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 176/393 (44%), Gaps = 43/393 (10%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 116
P P+ +I +TSGTTG PKG V+SH+ + S+ + D+V L APL
Sbjct: 151 PLDEPVGPDEPCMIMYTSGTTGRPKGAVLSHANITWNSVNVLVDTDLAGDEVTLVVAPLF 210
Query: 117 HIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK 175
H GL+ + + L+ G V F++ LEAV H VT + VP + +A R
Sbjct: 211 HTAGLNMTCLPTLLKGGRVVLHGAFDAGHVLEAVAAHRVTYMFGVPTMYDAMAAHPR--- 267
Query: 176 TWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 233
W+ D S++ + GG +P+ ++ T YGMTE S + F+ + T
Sbjct: 268 -WRDADLSSLRSVSCGGAPVPARTIE--TYLARGLAFSQGYGMTEASPGVLFLDREEATA 324
Query: 234 ET-PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRY 292
+ +P F T V P G G AP G IL RG +VM Y
Sbjct: 325 KAGSAGVPHFF---TDTRVTGPDG---GPAAP-----------GEKGEILVRGPNVMSGY 367
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
W + + T + WL TGD+ D+ G ++V R SGGENVYP EVE LL H
Sbjct: 368 WGRPADTAAAFTEDGWLRTGDVARTDEDGYAYIVDRVKDMFVSGGENVYPAEVEDALLGH 427
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P + V+G+ +A E+ A V L E D + E+L R H R
Sbjct: 428 PAVRECAVIGVPDAVWGEVGHAVVVL-------EPGADAGADGAEIL-----GRLHGR-- 473
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
L +K PR V + P T++GKI + VRR
Sbjct: 474 -LAKYKIPRT-VAFVDALPRTASGKIVKSAVRR 504
>gi|313107462|ref|ZP_07793649.1| putative AMP-binding enzyme [Pseudomonas aeruginosa 39016]
gi|386066494|ref|YP_005981798.1| acyl-CoA synthetase [Pseudomonas aeruginosa NCGM2.S1]
gi|310880151|gb|EFQ38745.1| putative AMP-binding enzyme [Pseudomonas aeruginosa 39016]
gi|348035053|dbj|BAK90413.1| acyl-CoA synthetase [Pseudomonas aeruginosa NCGM2.S1]
Length = 564
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 177/392 (45%), Gaps = 47/392 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ +G G +D + PL H G + + +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLGAEDRLVIPVPLYHCFGMVMGNLGCV 265
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ P F++++ L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTMIYPAPSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 324 MAGATCPIEVMRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E K+ +G + TRG VML YW+ A
Sbjct: 374 ----------TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEA 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ TGD+ +DD G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDPARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + R E +VA ++L + E LR C+ + + FK PR
Sbjct: 484 IPDERYGEEIVAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRH 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
F + FP+T TGKI++ +R + ++ L
Sbjct: 527 FKFVDE-FPMTVTGKIQKFRMREVSIEEIRLL 557
>gi|184201926|ref|YP_001856133.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
gi|183582156|dbj|BAG30627.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
Length = 540
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 196/449 (43%), Gaps = 60/449 (13%)
Query: 13 LELQHTAIPSLRWHVSLGSSSSD--FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVII 70
LE P L+ V +GS D FV D A + G H+ + AV I
Sbjct: 138 LEAARPHAPELQNVVLMGSPEWDALFVEPDDARLASVATGL--------HA---DDAVNI 186
Query: 71 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMV 130
+TSGTTG PKG +SH ++ ++ Y +D + PL H G+
Sbjct: 187 QYTSGTTGRPKGATLSHRNILNNGYFIGELLHYTAEDRIVVVPPLYHCFGMVIGNLAATS 246
Query: 131 GACHVFI--PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
C + + P F+ ++AL AV Q TSL VP + +A L +++ +
Sbjct: 247 HGCAIILSGPGFDPRAALRAVAQERATSLYGVPTMF--IAELELPDFGDYDLSTLRTGVM 304
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G P E+M++ + +++ YGMTETS P +F +
Sbjct: 305 AGSPCPMEVMRKVISEMHMSEVAICYGMTETS-------------------PVSFQTRSD 345
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSV 302
+S+ + G VG+ PHVE+K+ + G TRG VM YW Q
Sbjct: 346 DSLDRRVG-TVGRVHPHVEVKIVDPSTGETVPRGQAGEFCTRGYSVMKGYWGQEEKTREA 404
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
E WL TGDI +D+ G + GR + GGEN+YP EVE L HP ++ V+G
Sbjct: 405 IDPEGWLHTGDIAVMDEDGYAQITGRIKDMVIRGGENIYPREVEEFLYTHPDVVDAQVIG 464
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + + E ++ +RLR+ L++E + + K ++ K PR
Sbjct: 465 VPSEKYGEELMVWLRLRDGAP---------------ALTAEAILEFADGK-ISRHKIPR- 507
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+V + FP+T TGK+R+ E+R E + L
Sbjct: 508 YVHVVEEFPMTVTGKVRKVEMREEALKLL 536
>gi|254235546|ref|ZP_04928869.1| hypothetical protein PACG_01473 [Pseudomonas aeruginosa C3719]
gi|126167477|gb|EAZ52988.1| hypothetical protein PACG_01473 [Pseudomonas aeruginosa C3719]
Length = 564
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 177/392 (45%), Gaps = 47/392 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ +G G +D + PL H G + + +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLGAEDRLVIPVPLYHCFGMVMGNLGCV 265
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ P F++++ L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTMIYPAPSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 324 MAGATCPIEVMRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E K+ +G + TRG VML YW+ A
Sbjct: 374 ----------TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEA 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ TGD+ +DD G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDPARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + R E +VA ++L + E LR C+ + + FK PR
Sbjct: 484 IPDERYGEEIVAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRH 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
F + FP+T TGKI++ +R + ++ L
Sbjct: 527 FKFVDE-FPMTVTGKIQKFRMREISIEEIRLL 557
>gi|416872613|ref|ZP_11916817.1| AMP-binding domain protein [Pseudomonas aeruginosa 152504]
gi|416872754|ref|ZP_11916934.1| AMP-binding domain protein [Pseudomonas aeruginosa 152504]
gi|334845741|gb|EGM24301.1| AMP-binding domain protein [Pseudomonas aeruginosa 152504]
gi|334845851|gb|EGM24410.1| AMP-binding domain protein [Pseudomonas aeruginosa 152504]
Length = 564
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 177/392 (45%), Gaps = 47/392 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ +G G +D + PL H G + + +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLGAEDRLVIPVPLYHCFGMVMGNLGCV 265
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ P F++++ L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTMIYPAPSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 324 MAGATCPIEVMRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E K+ +G + TRG VML YW+ A
Sbjct: 374 ----------TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEA 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ TGD+ +DD G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDPARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + R E +VA ++L + E LR C+ + + FK PR
Sbjct: 484 IPDERYGEEIVAWIKLHPGHHADD----------------EQLRTFCKAR-IAHFKIPRH 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
F + FP+T TGKI++ +R + ++ L
Sbjct: 527 FRFVDE-FPMTVTGKIQKFRMREISIEEIRLL 557
>gi|416858764|ref|ZP_11913524.1| AMP-binding domain protein [Pseudomonas aeruginosa 138244]
gi|334839139|gb|EGM17834.1| AMP-binding domain protein [Pseudomonas aeruginosa 138244]
gi|453044975|gb|EME92696.1| AMP-binding domain protein [Pseudomonas aeruginosa PA21_ST175]
Length = 564
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 177/392 (45%), Gaps = 47/392 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ +G G +D + PL H G + + +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLGAEDRLVIPVPLYHCFGMVMGNLGCV 265
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ P F++++ L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTMIYPAPSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 324 MAGATCPIEVMRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E K+ +G + TRG VML YW+ A
Sbjct: 374 ----------TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEA 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ TGD+ +DD G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDPARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + R E +VA ++L + E LR C+ + + FK PR
Sbjct: 484 IPDERYGEEIVAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRH 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
F + FP+T TGKI++ +R + ++ L
Sbjct: 527 FRFVDE-FPMTVTGKIQKFRMREVSIEEIRLL 557
>gi|424941819|ref|ZP_18357582.1| probable AMP-binding enzyme [Pseudomonas aeruginosa NCMG1179]
gi|346058265|dbj|GAA18148.1| probable AMP-binding enzyme [Pseudomonas aeruginosa NCMG1179]
Length = 564
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 177/392 (45%), Gaps = 47/392 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ +G G +D + PL H G + + +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLGAEDRLVIPVPLYHCFGMVMGNLGCV 265
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ P F++++ L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTMIYPAPSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 324 MAGATCPIEVMRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E K+ +G + TRG VML YW+ A
Sbjct: 374 ----------TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEA 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ TGD+ +DD G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 VDPARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + R E +VA ++L + E LR C+ + + FK PR
Sbjct: 484 IPDERYGEEIVAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRH 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
F + FP+T TGKI++ +R + ++ L
Sbjct: 527 FRFVDE-FPMTVTGKIQKFRMREISIEEIRLL 557
>gi|167647935|ref|YP_001685598.1| long-chain-fatty-acid--CoA ligase [Caulobacter sp. K31]
gi|167350365|gb|ABZ73100.1| AMP-dependent synthetase and ligase [Caulobacter sp. K31]
Length = 530
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 176/389 (45%), Gaps = 55/389 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALI----VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
+ +TSGTTG PKG +++H+ ++ + + A +A +G DDV L P+ HIGG
Sbjct: 172 VQLYTSGTTGRPKGAMLTHANILGPRRLAAAADMAWNRWGPDDVSLVAMPVAHIGGTGWG 231
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ L+ GA V +F+ L+ +E+ V+ + VPA + + L R ++ R +
Sbjct: 232 VVGLVNGAKGVVAREFDPTKVLDFIERDRVSKMFMVPAALQIVVRLPRARQVDYSR--LT 289
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
IL G +P +L++E F + YGMTET+ ++ ++
Sbjct: 290 HILYGAAPIPLDLLRECLEVF-GCGFVQQYGMTETTGTVVYL------------------ 330
Query: 245 NVTPNSVHQPQG----VCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQ 295
P H P G G P P VEL++ DG VG + R M YW
Sbjct: 331 ---PPEDHDPAGNPRMRSAGLPMPGVELRILGEDGRVLPPGEVGEVAVRSPANMAGYWKL 387
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
A + WL TGD G ID G +++ R I SGGEN+YP EVE+ + HP +
Sbjct: 388 PEATADTIDSDSWLRTGDAGYIDADGYLFIHDRVKDMIISGGENIYPAEVESAVYGHPHV 447
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ V+G+ + E V A V L+ ++ S+ + +
Sbjct: 448 AEVAVIGVPDDTWGEAVKAVVALKPGAPRDPADIIAFSRTR-----------------IA 490
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
GFKAP+ + + + P ++GKI R E+R
Sbjct: 491 GFKAPKT-IDFVEALPRNASGKILRRELR 518
>gi|421075462|ref|ZP_15536475.1| AMP-dependent synthetase and ligase [Pelosinus fermentans JBW45]
gi|392526460|gb|EIW49573.1| AMP-dependent synthetase and ligase [Pelosinus fermentans JBW45]
Length = 546
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 188/398 (47%), Gaps = 47/398 (11%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IG 119
S P+ + + +TSGTTG PKGV+++H+ LI + + + + + D P H G
Sbjct: 186 SLDPDDVISMMYTSGTTGFPKGVMLTHNNLIGNACSLAECMDFTKKDRLCIPVPFFHCFG 245
Query: 120 GLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
+ MA ++ GA V I F LE +E+ T++ VP + + L ++K
Sbjct: 246 CVLGTMACVVSGATMVPIVVFNPIKVLETIEKESCTAVHGVPTMF--IMELEEMEKNKYD 303
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
S++ + G P E+MK+ + ++ YG TE S +T MT D LE
Sbjct: 304 TSSLRTGIMAGSPCPIEVMKKVVDKMGVKEITITYGQTEASPGIT-MTRTDDPLEL---- 358
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGSSHV-----GRILTRGAHVMLRYW 293
+ VG+ P+VE+K+ S+ V G + +RG + M Y+
Sbjct: 359 ---------------RVTTVGRALPNVEVKIIDSETGKEVPRNTQGELCSRGYNTMKGYY 403
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
A + + WL TGD+ +D+ G + GR I GGEN+YP E+E + HP
Sbjct: 404 KMIEATAAAIDNDGWLHTGDLAVMDENGYCKITGRLKDMIIRGGENIYPREIEEFIYTHP 463
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
+ + VVG+ + + E V+A ++++ +E E L+++CREK
Sbjct: 464 KVKDVQVVGVPSEKYGEEVMAFIQIKPGNSITE----------------EELKEYCREK- 506
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ +K P+ ++ + +P+T++GKI++ ++R M L
Sbjct: 507 IARYKIPK-YIAFVDGYPITASGKIQKYKLRELAMELL 543
>gi|15597753|ref|NP_251247.1| AMP-binding protein [Pseudomonas aeruginosa PAO1]
gi|218891464|ref|YP_002440331.1| AMP-binding protein [Pseudomonas aeruginosa LESB58]
gi|418585097|ref|ZP_13149152.1| AMP-binding domain protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418590678|ref|ZP_13154586.1| AMP-binding domain protein [Pseudomonas aeruginosa MPAO1/P2]
gi|420139736|ref|ZP_14647555.1| AMP-binding domain protein [Pseudomonas aeruginosa CIG1]
gi|421160319|ref|ZP_15619389.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 25324]
gi|421517066|ref|ZP_15963740.1| AMP-binding domain protein [Pseudomonas aeruginosa PAO579]
gi|9948616|gb|AAG05945.1|AE004683_9 probable AMP-binding enzyme [Pseudomonas aeruginosa PAO1]
gi|218771690|emb|CAW27464.1| probable AMP-binding enzyme [Pseudomonas aeruginosa LESB58]
gi|375044826|gb|EHS37418.1| AMP-binding domain protein [Pseudomonas aeruginosa MPAO1/P1]
gi|375050635|gb|EHS43115.1| AMP-binding domain protein [Pseudomonas aeruginosa MPAO1/P2]
gi|403247484|gb|EJY61121.1| AMP-binding domain protein [Pseudomonas aeruginosa CIG1]
gi|404346548|gb|EJZ72897.1| AMP-binding domain protein [Pseudomonas aeruginosa PAO579]
gi|404544803|gb|EKA53935.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 25324]
Length = 564
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 177/392 (45%), Gaps = 47/392 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ +G G +D + PL H G + + +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLGAEDRLVIPVPLYHCFGMVMGNLGCV 265
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ P F++++ L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTMIYPAPSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 324 MAGATCPIEVMRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E K+ +G + TRG VML YW+ A
Sbjct: 374 ----------TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEA 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ TGD+ +DD G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDPARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + R E +VA ++L + E LR C+ + + FK PR
Sbjct: 484 IPDERYGEEIVAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRH 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
F + FP+T TGKI++ +R + ++ L
Sbjct: 527 FKFVDE-FPMTVTGKIQKFRMREISIEEIRLL 557
>gi|421180309|ref|ZP_15637876.1| AMP-binding domain protein [Pseudomonas aeruginosa E2]
gi|404545989|gb|EKA55058.1| AMP-binding domain protein [Pseudomonas aeruginosa E2]
Length = 564
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 177/392 (45%), Gaps = 47/392 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ +G G +D + PL H G + + +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLGAEDRLVIPVPLYHCFGMVMGNLGCV 265
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ P F++++ L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTMIYPAPSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 324 MAGATCPIEVMRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E K+ +G + TRG VML YW+ A
Sbjct: 374 ----------TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEA 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ TGD+ +DD G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDPARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + R E +VA ++L + E LR C+ + + FK PR
Sbjct: 484 IPDERYGEEIVAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRH 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
F + FP+T TGKI++ +R + ++ L
Sbjct: 527 FRFVDE-FPMTVTGKIQKFRMREISIEEIRLL 557
>gi|118465694|ref|YP_881765.1| feruloyl-CoA synthetase [Mycobacterium avium 104]
gi|118166981|gb|ABK67878.1| feruloyl-CoA synthetase [Mycobacterium avium 104]
Length = 495
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 191/416 (45%), Gaps = 43/416 (10%)
Query: 42 MLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIV 101
++T+D + + P + P+ ++ FTSGTT PK V ++H+ L +
Sbjct: 112 VMTSDEFIEAARSTEPVSVFADPDDVAVVLFTSGTTSRPKAVELTHNNLTSYVTGTVEFG 171
Query: 102 GYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 161
D L P HI G+ +A++ L G V++ +F+ + V VT+ VP
Sbjct: 172 SADPADAALVCVPPYHIAGVGAALSNLYAGRAIVYLRRFDPHEWVRLVRDERVTTATVVP 231
Query: 162 AIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 221
+++ + ++ + +++ GG + L++ A + P+ ++AYG+TETSS
Sbjct: 232 TMLSRIVAVLEEQSAEL--PTLRNFAYGGSKVARPLVRRALDLLPQVGFVNAYGLTETSS 289
Query: 222 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSS 276
++ +T D L + +T VG+P P +E+++ ++ G
Sbjct: 290 TIAVLTPEDHRLAHEARDDAVARRLT----------SVGRPVPGIEVQIRAEDGTVLGPG 339
Query: 277 HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSG 336
G + RG V RY + SV W T D+ +D+ G +++ GR + I G
Sbjct: 340 ETGELFVRGPQVSGRYTEIG----SVLDDHGWFATRDVAMLDEDGYLFIGGRSDDTIIRG 395
Query: 337 GENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 396
GEN+ P EVE VL++HP + +VVVG+ +A + +VA + ES
Sbjct: 396 GENIAPSEVEDVLIEHPDVREVVVVGLDDAEWGQAIVAVI-------VPESGTAP----- 443
Query: 397 ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ E LR+ R K L G + P V +R P T TGK+ +RRE++ LK
Sbjct: 444 ----APERLREFARSK-LRGSRTPDRIV-FRDELPTTPTGKV----LRREILEDLK 489
>gi|107102005|ref|ZP_01365923.1| hypothetical protein PaerPA_01003052 [Pseudomonas aeruginosa PACS2]
gi|116050501|ref|YP_790680.1| AMP-binding protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|421174299|ref|ZP_15632030.1| AMP-binding domain protein [Pseudomonas aeruginosa CI27]
gi|115585722|gb|ABJ11737.1| putative acyl-CoA synthetases (AMP-forming) [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404534503|gb|EKA44236.1| AMP-binding domain protein [Pseudomonas aeruginosa CI27]
Length = 564
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 177/392 (45%), Gaps = 47/392 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ +G G +D + PL H G + + +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLGAEDRLVIPVPLYHCFGMVMGNLGCV 265
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ P F++++ L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTMIYPAPSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 324 MAGATCPIEVMRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E K+ +G + TRG VML YW+ A
Sbjct: 374 ----------TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEA 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ TGD+ +DD G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDPARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + R E +VA ++L + E LR C+ + + FK PR
Sbjct: 484 IPDERYGEEIVAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRH 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
F + FP+T TGKI++ +R + ++ L
Sbjct: 527 FRFVDE-FPMTVTGKIQKFRMREISIEEIRLL 557
>gi|319652352|ref|ZP_08006469.1| feruloyl-CoA synthetase [Bacillus sp. 2_A_57_CT2]
gi|317396013|gb|EFV76734.1| feruloyl-CoA synthetase [Bacillus sp. 2_A_57_CT2]
Length = 493
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/389 (31%), Positives = 186/389 (47%), Gaps = 58/389 (14%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-S 123
E IIC+TSGTTG PKG V++ S + ++ + +D + PL HIGG+
Sbjct: 149 EAPYIICYTSGTTGKPKGAVLTQSNMFWNAVNNKLAIDLTSEDRSIVLLPLFHIGGIGLF 208
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 181
A L G V KFE + A+ +++H VT ++ VP I L T +++ D
Sbjct: 209 AFPALFSGGTIVIPGKFEPEKAMSMIQEHKVTIVMGVPTIHQALLT----SPSFQTADLS 264
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLP 240
+V+ NGG P EL+ F + L +GMTETS +L +T D P
Sbjct: 265 AVRWFYNGGAPCPRELIDA---YFDRGFLFGQGFGMTETSPTLFMLTKEDA--------P 313
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQ 295
+ G++ GKP E K+ SDG VG + RG ++M YW++
Sbjct: 314 RKKGSI-------------GKPVLFSEYKLIDSDGKEVEKGEVGELAVRGPNIMKEYWNR 360
Query: 296 FLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
A K S+ G WL TGD+ DD G +++VGR+ I SGGEN+YP EVE V+ Q
Sbjct: 361 PDATKDSLKDG--WLLTGDLAKTDDEGFLYIVGRKKEMIISGGENIYPLEVEQVISQLRD 418
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
++ + VVG A+ E+ A + R N L +V+ Q+C+ K L
Sbjct: 419 VVEVAVVGNADPLWGEVPEAFIVKR---------------NGSALTEGDVI-QYCQGK-L 461
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEV 443
+K P+ V + P +TGKI++ ++
Sbjct: 462 AKYKIPKK-VTFLNGLPKNATGKIQKTQL 489
>gi|302557512|ref|ZP_07309854.1| substrate-CoA ligase [Streptomyces griseoflavus Tu4000]
gi|302475130|gb|EFL38223.1| substrate-CoA ligase [Streptomyces griseoflavus Tu4000]
Length = 538
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 189/441 (42%), Gaps = 55/441 (12%)
Query: 13 LELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 72
+E A P LR V +G S D LT R + + V I +
Sbjct: 137 VEQVRGACPDLRETVYIGDPSWD------ALTGAAAAVPPERPDEIAAGLSCDDPVNIQY 190
Query: 73 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVG 131
TSGTTG PKG +SH ++ VGY E D P H G+ +A G
Sbjct: 191 TSGTTGFPKGATLSHHNILNNGYWVGRTVGYTERDRVCLPVPFYHCFGMVMGNLAATSHG 250
Query: 132 ACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
AC V P F+ + LEAV++ TSL VP + +A L S++ + G
Sbjct: 251 ACIVVPAPSFDPAATLEAVQRERCTSLYGVPTMF--IAELNLPGFASYDLTSLRTGIMAG 308
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P E+MK ++ YGMTETS ++ T D LE
Sbjct: 309 SPCPVEVMKRVVAEMHMEQVSICYGMTETSP-VSLQTRMDDDLE---------------- 351
Query: 251 VHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVST 304
H+ VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 352 -HRTG--TVGRVLPHIEVKVVDPATGVTLPRGAAGELCTRGYSVMLGYWNEPEKTAEAVD 408
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
W+ TGD+ + + G V +VGR I GGEN+YP E+E L HP I I VVG A
Sbjct: 409 AGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADIQVVGTA 468
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLF 423
+ R E V+ACV R+ + E LR C ++ L +K P RL
Sbjct: 469 HERYGEEVLACVVPRDPADPP---------------TLEELRAFCADR-LAHYKIPSRLQ 512
Query: 424 VLWRKPFPLTSTGKIRRDEVR 444
+L FP+T +GK+R+ E+R
Sbjct: 513 LL--DTFPMTVSGKVRKVELR 531
>gi|359771954|ref|ZP_09275394.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
gi|359310909|dbj|GAB18172.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
Length = 547
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 177/399 (44%), Gaps = 47/399 (11%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IG 119
S P+ + I +TSGTTG+PKG ++H ++ ++ Y + D P H G
Sbjct: 185 SLHPDDPINIQYTSGTTGAPKGATLTHRNILNNGYFVGELINYTDADRVCLPVPFYHCFG 244
Query: 120 GLSSAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
+ +A GA V P F+ + L AVE++ TSL VP + +A L
Sbjct: 245 MVMGNLAATSHGAAMVIPAPAFDPAATLSAVEKYQCTSLYGVPTMF--IAELSLPNFDDY 302
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
+++ + G P ++M++ +++ YGMTETS T T D LE
Sbjct: 303 DLTTLRTGIMAGSPCPEQVMRQVVERMHMSEVSICYGMTETSPVST-QTRADDELEL--- 358
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRY 292
+ VG+ PH+E+KV + G TRG VM Y
Sbjct: 359 ----------------RVTTVGRVGPHLEIKVVDPVTGETVPRGTPGEFCTRGYSVMQGY 402
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
W+Q V E W+ TGDI + D G V + GR + GGEN+YP E+E L H
Sbjct: 403 WNQPEKTAEVLDAEGWMHTGDIAVLADNGYVQITGRIKDMVIRGGENIYPREIEEFLYTH 462
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P I+ V+G+ +A+ E ++A VRLR+ D + ++ ++ R
Sbjct: 463 PDILDAQVIGVPDAKYGEELMAWVRLRDGV------ADFTVEDLRTFADGQIARH----- 511
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
K PR +V FP+T TGK+R+ ++R E + L
Sbjct: 512 -----KIPR-YVRVVDEFPMTVTGKVRKVQMRTEAVELL 544
>gi|358638274|dbj|BAL25571.1| acetyl-CoA synthetase [Azoarcus sp. KH32C]
Length = 584
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 182/390 (46%), Gaps = 49/390 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAML 128
I FTSGTTG PKG +SH ++ + E D PL H G+ + L
Sbjct: 228 IQFTSGTTGQPKGATLSHHNILNNGFFVGEAIRLVEGDRLCIPVPLYHCFGMVMGNLGCL 287
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA ++ FE + LE + + T+ VP + +A L K +++ +
Sbjct: 288 THGATMIYPAESFEPLATLETLAEERCTASYGVPTMF--IAMLDHPKFNEFDLSALRTGI 345
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK + ++ AYGMTETS P +F + T
Sbjct: 346 MAGSPCPIEVMKRVIDKMHMREVTIAYGMTETS-------------------PVSFQSGT 386
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAKPS 301
+ + + + VG+ PH+E+K+ + V G + TRG VML YW D+ + +
Sbjct: 387 DDPIDR-RVSTVGRVQPHLEVKIVDNEGRIVPRGTPGELCTRGYSVMLGYWGDEAKTREA 445
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
V G W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +HP I+ + VV
Sbjct: 446 VDAGR-WMHTGDLATIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKILDVQVV 504
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E + A V +RE SE +R+ C+ + + +K PR
Sbjct: 505 GVPDQKYGEELCAWVIVREGQTLSEDE----------------VREFCKGQ-IAHYKVPR 547
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
++ + FP+T TGKI++ ++R ++ L
Sbjct: 548 -YIRFVDTFPMTVTGKIQKFQIREQMKREL 576
>gi|404445193|ref|ZP_11010337.1| AMP-dependent synthetase and ligase [Mycobacterium vaccae ATCC
25954]
gi|403652587|gb|EJZ07618.1| AMP-dependent synthetase and ligase [Mycobacterium vaccae ATCC
25954]
Length = 518
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 182/386 (47%), Gaps = 43/386 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ V + +TSGTTG PKGV++S++ + ++ D V L PL H+ G
Sbjct: 159 PDDLVFLMYTSGTTGLPKGVMLSNTNYVCKTGGVAGHWQLDADAVSLAVMPLFHMAGSGW 218
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
A A L GA V + + + L+A+ +H VT+++ VPA++ L ++ ++
Sbjct: 219 AFAGLWQGATTVVLRDVDPGAILDALARHRVTNMLLVPAVIQFLLDADGIEHV--DLSAL 276
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ I+ G + +++ + F YGMTET+ S+T L+ P LP+
Sbjct: 277 RVIVYGASPISDDVLIRGIDRF-GGVFAQVYGMTETTGSIT-------QLDGPDHLPELL 328
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLA 298
+ C GKP P V+L+V D + VG + TR ML YW+ A
Sbjct: 329 RS------------C-GKPYPWVQLRVVGDDGADAAPGTVGEVWTRSPQNMLGYWNNPDA 375
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ T + WL TGD G +D G ++L R I SGGENVYP EVE VL+ HP + +
Sbjct: 376 SAATLTADGWLRTGDAGFVDADGYLYLHDRIKDMIVSGGENVYPAEVENVLMTHPAVADV 435
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+G+ + R E V A V R + + + EL+ R++ L GFK
Sbjct: 436 AVIGVPDRRWGEAVKAIVVARVVARGA------APTEAELI-------AFARDR-LAGFK 481
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVR 444
P+ V + P +GK+ + +R
Sbjct: 482 LPK-SVDFVDALPRNPSGKLLKRALR 506
>gi|357387650|ref|YP_004902489.1| putative long-chain fatty-acid--CoA ligase [Kitasatospora setae
KM-6054]
gi|311894125|dbj|BAJ26533.1| putative long-chain fatty-acid--CoA ligase [Kitasatospora setae
KM-6054]
Length = 562
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 182/393 (46%), Gaps = 53/393 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E D P H G+ +A +
Sbjct: 210 IQYTSGTTGFPKGATLSHRNILNNGYFVGELCNYTERDRICIPVPFYHCFGMVMGNLAAV 269
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVK 184
GAC V P F++ + L AV TSL VP + +A+LA + G D S++
Sbjct: 270 SHGACTVIPAPAFDAATTLAAVAAERCTSLYGVPTMFIAELA-----DPGFDGYDLSSLR 324
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P+E+MK ++ YGMTETS T T D ++E
Sbjct: 325 TGIMAGAPCPTEVMKGVMERMGMTEVSICYGMTETSPVST-QTRADDSVER--------- 374
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 298
+ VG+ PH+E+KV + H G + TRG VML YW + +
Sbjct: 375 ----------RVSTVGRVGPHLEVKVVDPETGHTVPRGEPGELCTRGYSVMLGYWAEPVK 424
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ W+ TGD+ +D G + + GR + GGENVYP EVE L HP ++ +
Sbjct: 425 TAEAVDPDGWMHTGDLAVMDADGYLSITGRIKDMVIRGGENVYPREVEEFLYAHPDVLDV 484
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+G+ +A+ E ++A VR+RE + L++E +R C + L FK
Sbjct: 485 QVIGVPDAKYGEELMAWVRMREGAR---------------PLTAEAVRAFCTGR-LAHFK 528
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
PR +V FP+T TGK+R+ E+R + L
Sbjct: 529 IPR-YVHVVDEFPMTVTGKVRKVEMRERAAAIL 560
>gi|113867951|ref|YP_726440.1| AMP-binding domain protein [Ralstonia eutropha H16]
gi|113526727|emb|CAJ93072.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Ralstonia
eutropha H16]
Length = 574
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 207/450 (46%), Gaps = 56/450 (12%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILK---GYSLRSL-PFTHSWAPEGAVI 69
ELQ +P+LR + +G + + + AD++ G + +L T +
Sbjct: 163 ELQAARLPALRCVIRMGDDHTPGM----LRYADVIARGTGVARSTLDAITAQLDRHDPIN 218
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
+ FTSGTTG+PKG ++H ++ + + + E D P H G+ A +A +
Sbjct: 219 VQFTSGTTGAPKGATLTHRNIVNNARFIAMAMRFSEQDKLCIPVPFYHCFGMVLAVLACV 278
Query: 129 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA VF + FE ++ ++AV + T+L VP + +A L S++ +
Sbjct: 279 SSGAAMVFPGQAFEPEATMQAVSEERCTALHGVPTMF--IAQLDHPNFASYDFSSLRTGI 336
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E MK + +++ AYGMTETS P +F + T
Sbjct: 337 MAGSPCPIETMKRVVSQMHMSEVTIAYGMTETS-------------------PVSFQSST 377
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 302
+ + + + VG+ PH+E+++ + V G + TRG VML YWD A+ +
Sbjct: 378 TDPLDK-RTTTVGRIQPHLEVRIVDATGATVPVGETGELCTRGYSVMLGYWDD-EARTAE 435
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ + W+ TGD+ +ID G +VGR + GGEN+YP E+E L +HP + + V G
Sbjct: 436 AIRDGWMHTGDLATIDAEGYCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFG 495
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + + E V A + L+ +E +R CR++ + +K PR
Sbjct: 496 VPDQKYGEEVCAWIVLKPGASATEDE----------------IRDFCRDQ-IAHYKIPR- 537
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
++ + P+T TGK+++ +R + LK
Sbjct: 538 YIRFVDEMPMTITGKVQKFVMRERMTQDLK 567
>gi|365866103|ref|ZP_09405729.1| AMP-binding domain protein [Streptomyces sp. W007]
gi|364004493|gb|EHM25607.1| AMP-binding domain protein [Streptomyces sp. W007]
Length = 535
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 168/383 (43%), Gaps = 47/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y ++D P H G+ +A
Sbjct: 187 IQYTSGTTGFPKGATLSHHNILNNGYFVGETIAYTQEDRICVPVPFYHCFGMVMGNLAGT 246
Query: 129 MVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GAC V P FE + L AV+Q TSL VP + +A L S++ +
Sbjct: 247 SHGACIVIPGPSFEPAAVLTAVQQERCTSLYGVPTMF--IAELNLPDFAAYDLSSLRTGI 304
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P+E+MK A++ YGMTETS T D G
Sbjct: 305 MAGSPCPAEVMKRVVAEMHMAEVSICYGMTETSPVSTQTRRDDDLDRRTGT--------- 355
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPS 301
VG+ PH+E+KV + VG + TRG VML YWDQ
Sbjct: 356 -----------VGRALPHIEIKVVDPVTGVTLPRGSVGELRTRGYGVMLGYWDQPDRTAE 404
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ + + G V + GR I GGENVYP E+E L HP + + VV
Sbjct: 405 AVDAGRWMRTGDLAVMREDGYVQVAGRIKDMIIRGGENVYPREIEEFLYGHPKVADVQVV 464
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + R E ++ACV R+ + E + +CRE+ L +K PR
Sbjct: 465 GVPDERYGEEILACVIPRDPADPP---------------TLEEIAAYCRER-LAHYKIPR 508
Query: 422 LFVLWRKPFPLTSTGKIRRDEVR 444
+ + FP+T +GK+R+ E+R
Sbjct: 509 RLRIL-ETFPMTVSGKVRKIELR 530
>gi|289448150|ref|ZP_06437894.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CPHL_A]
gi|289421108|gb|EFD18309.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CPHL_A]
Length = 547
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 178/394 (45%), Gaps = 49/394 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMA 126
V I +TSGTT PKGV +SH ++ ++GY D P H G + +A
Sbjct: 191 VNIQYTSGTTAYPKGVTLSHRNILNNGYLVGELLGYTAQDRICIPVPFYHCFGMVMGNLA 250
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
GA V P F+ + L AV+ TSL P + +A L T S++
Sbjct: 251 ATSHGAAMVIPAPGFDPAATLRAVQDERCTSLYGAPTMF--IAELGLPDFTDYELGSLRT 308
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+M++ + + YGMTETS P +
Sbjct: 309 GIMAGAACPVEVMRKVISRMHMPGVSICYGMTETS-------------------PVSTQT 349
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAK 299
+SV + G VG+ PH+E+KV + VG TRG VM YW+
Sbjct: 350 RADDSVDRRVGT-VGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKT 408
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
V + W+ TGD+ +D G V + GR + GGEN+ P E+E +L HP I+
Sbjct: 409 AEVIDADGWMHTGDLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGH 468
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+G+ +A+ E ++A V+LR N L+ E LR++C + + FK
Sbjct: 469 VIGVPDAKYGEELMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKI 512
Query: 420 PRLFVLW-RKPFPLTSTGKIRRDEVRREVMSHLK 452
PR LW FP+T TGK+R+ E+R++ + +L+
Sbjct: 513 PRY--LWIVDEFPMTVTGKVRKVEMRQQALEYLR 544
>gi|311029635|ref|ZP_07707725.1| AMP-dependent synthetase and ligase [Bacillus sp. m3-13]
Length = 507
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 178/387 (45%), Gaps = 54/387 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-L 128
I +TSGTTG PKG + H + L+ + +G + + +LH APL H L+ +
Sbjct: 161 ILYTSGTTGRPKGALFDHRRIFNVGLSMMISMGINQQERFLHIAPLFHSAQLNLFLVSGT 220
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
++GA H F L+A+++H +T VPA+ L + S+K+
Sbjct: 221 VLGATHFIHRDFHPVHTLQAIQEHKITHFFGVPAMFNFLLQVPNADSY--DLSSIKRCGY 278
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G + EL+K++ N F + + G+TE + L DP
Sbjct: 279 GAAPMAPELVKKSMNLFKNDQFFNLCGLTEAGPN---GILLDPI---------------- 319
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVS 303
H+ GKP+ E +V + VG + +G +M Y+ KP +
Sbjct: 320 --GHKKHLGKNGKPSFLTEARVVDETGRDIEVGAVGEFILKGESIMKEYY----KKPEET 373
Query: 304 TGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+ WL TGD+ ++D+ GN+ LV R+ I SGGENVY EVE VL +HP ++ +
Sbjct: 374 KAALKDGWLYTGDLATVDEEGNITLVDRKKDMIISGGENVYSIEVEEVLYEHPQVLEAAI 433
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ + W E+ C +K+ +++ E L+Q CR+K L G+K P
Sbjct: 434 IGLPDE----------------VWGEAVCAVVVPHKDQVVNEEELKQFCRQK-LAGYKVP 476
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREV 447
R + + P ++GKI + ++R+++
Sbjct: 477 RR-IFLEETLPRNASGKILKYQLRQQL 502
>gi|294501624|ref|YP_003565324.1| O-succinylbenzoate-CoA ligase [Bacillus megaterium QM B1551]
gi|294351561|gb|ADE71890.1| O-succinylbenzoate-CoA ligase [Bacillus megaterium QM B1551]
Length = 487
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 199/424 (46%), Gaps = 60/424 (14%)
Query: 35 DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 94
+F + LT LK F +W E I +TSGTTG PKGV+ ++ S
Sbjct: 115 EFQSSITQLTLPALKSSPEAETGFQKTWNLEETFTIMYTSGTTGHPKGVLQTYGNHWWSS 174
Query: 95 LAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCV 154
+ +G E D +L PL HI GLS M + G + +FE+++ EA+E V
Sbjct: 175 VGSALNLGLNEKDCWLIAVPLFHISGLSILMRSVFYGMKIILEERFEARAVNEAIENKGV 234
Query: 155 TSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAY 214
T + V ++++++ + +K + + +L GGG P +++ N + + Y
Sbjct: 235 TIISVVTSMLSNMLDELGERKY---PHTFRCMLLGGGPAPLTILEACVNK--EIPVYQTY 289
Query: 215 GMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG 274
GMTETSS F+TL +P + G+ GKP +K+ +
Sbjct: 290 GMTETSSQ--FVTL------SPEDSLRKLGSA-------------GKPLFPCAMKIVDEK 328
Query: 275 ---SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGR 328
+S G I+ +G +V Y L KP + + W TGDIG +D+ G ++++ R
Sbjct: 329 GNETSEAGEIIVKGPNVTKGY----LNKPEATEKALQQGWFYTGDIGKVDEEGFLYVLDR 384
Query: 329 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 388
R+ I SGGENVYP E+E +LL+HP + V G+A+ + ++ AC+ +E
Sbjct: 385 RSDLIISGGENVYPAEIENILLKHPAVKEAGVTGVADEKWGQVPAACIVTKED------- 437
Query: 389 CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVM 448
+S E L H ++ L +K P+ FV + P T++ KI +RR++
Sbjct: 438 -----------VSDEELSLHM-QQFLAKYKLPKYFVRVEE-LPRTASNKI----IRRKLS 480
Query: 449 SHLK 452
S ++
Sbjct: 481 SFIQ 484
>gi|254240989|ref|ZP_04934311.1| hypothetical protein PA2G_01670 [Pseudomonas aeruginosa 2192]
gi|451984300|ref|ZP_21932557.1| Acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas aeruginosa 18A]
gi|126194367|gb|EAZ58430.1| hypothetical protein PA2G_01670 [Pseudomonas aeruginosa 2192]
gi|451758229|emb|CCQ85080.1| Acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas aeruginosa 18A]
Length = 564
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 177/392 (45%), Gaps = 47/392 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ +G G +D + PL H G + + +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLGAEDRLVIPVPLYHCFGMVMGNLGCV 265
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ P F++++ L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTMIYPAPSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 324 MAGATCPIEVMRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E K+ +G + TRG VML YW+ A
Sbjct: 374 ----------TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEA 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ TGD+ +DD G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDPARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + R E +VA ++L + E LR C+ + + FK PR
Sbjct: 484 IPDERYGEEIVAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRH 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
F + FP+T TGKI++ +R + ++ L
Sbjct: 527 FRFVDE-FPMTVTGKIQKFRMREISIEEIRLL 557
>gi|443686109|gb|ELT89489.1| hypothetical protein CAPTEDRAFT_222402 [Capitella teleta]
Length = 577
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 189/419 (45%), Gaps = 48/419 (11%)
Query: 41 DMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI 100
D++T+ ++ R L + V I FTSGTTG+PKGV++SH ++ S
Sbjct: 194 DVMTSGESTAFNRRLLEIQDKIQFDDPVNIQFTSGTTGNPKGVLLSHHNIVNNSYFSALR 253
Query: 101 VGYGEDDVYLHT-APLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSL 157
+ Y + + PL H G+ + A P F ++ L+A+EQ TSL
Sbjct: 254 LNYHQKPHRICIPVPLYHCFGMVIGSLQNVTSASTTVYPSGSFNPEACLKAIEQEKCTSL 313
Query: 158 ITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 217
P + D+ L DS+ + G P E+MK+ ++ AYG T
Sbjct: 314 YGTPTMFIDILHLPNFDDY--KIDSLNTGVMAGSPCPIEVMKQVRTKLHMPEVTIAYGTT 371
Query: 218 ETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH 277
E +S +TF T D T+E Q +G+P HVE+KV
Sbjct: 372 E-NSPVTFQTYQDDTIER-------------------QVSTIGRPLHHVEVKVVDREGRI 411
Query: 278 V-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGR 332
V G + RG VM Y+ A V + W TGD+ ++D+ +VGR
Sbjct: 412 VPVNTPGELCIRGHVVMHSYYQDEAATAEVIGPDRWYKTGDLATLDEHSYAKIVGRIKDM 471
Query: 333 IKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQS 392
I GGEN+YP +VE +L ++ I + VVG+ + RL E V A ++L+E Q+
Sbjct: 472 IIRGGENIYPLDVEQILYENSKIEDVQVVGVPDPRLQEQVCAWIKLKEG---------QT 522
Query: 393 SKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ E +++ C+ K ++ FK P ++ + + FPLT TGK+++ ++R L
Sbjct: 523 ATADE-------IKEFCKGK-ISHFKIPH-YIQFVEEFPLTVTGKVQKYKIREMATEQL 572
>gi|386811464|ref|ZP_10098690.1| long-chain-fatty-acid--CoA ligase [planctomycete KSU-1]
gi|386406188|dbj|GAB61571.1| long-chain-fatty-acid--CoA ligase [planctomycete KSU-1]
Length = 483
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 182/388 (46%), Gaps = 52/388 (13%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
E I +TSGT +PKGV+++H + I + + D+ L PL H L++
Sbjct: 141 EDLAAILYTSGTDANPKGVMLTHKNFLSNLDGCIHAFKFTDKDILLGILPLFHTYALTTT 200
Query: 125 MAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR-VKKTWKGRDS 182
+ + VGA V++ +F LE +E++ +T + +P++ L+R V T S
Sbjct: 201 LILPTCVGATVVYLERFSGPKVLEVIEKYKITCISAIPSMYR---MLVRAVTSTKHNVSS 257
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ +GG LP E++ +FP +L+ YG+TE ++ ++ T P+
Sbjct: 258 LRLCTSGGEHLPGEILAAFNKAFP-VRLMEGYGLTEATAVVSVNT------------PEK 304
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFL 297
+ PNS+ G P ++E+K+ + ++ G I +G ++M Y+
Sbjct: 305 Y---KPNSI--------GAPLDNLEVKIAGESGQCLPANKEGEIWVKGPNIMKGYYKLPN 353
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
T + WL TGD G +D G +W+ GR+ I GENV P E+E V+ +H +
Sbjct: 354 ETEKTITSDNWLKTGDYGKVDTEGFLWITGRKKDLIIISGENVSPREIEQVIGEHEKVFE 413
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG+ + E+ AC+ L E SE E +R HC ++ L +
Sbjct: 414 VAVVGVPDKVRGEVPKACIVLHEHAMCSE----------------EEIRDHCMQR-LPNY 456
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
K P+ F + K P + TGKI + +R+
Sbjct: 457 KVPKYFE-FLKELPHSPTGKILKRVLRQ 483
>gi|221067803|ref|ZP_03543908.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
gi|220712826|gb|EED68194.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
Length = 513
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 186/385 (48%), Gaps = 48/385 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMA 126
++I +TSGTTG PK ++H + + +LA+ A V DDV PL H+GG++ +
Sbjct: 167 LMIIYTSGTTGRPKAAGLTHRSQLGSALAQHAHVRAAADDVVQLAMPLNHVGGITCGVLT 226
Query: 127 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 186
ML+ G C +P F ++ L ++H T L+ VP ++ L + + R ++ I
Sbjct: 227 MLLAGGCCELVPMFSPEALLRMAQKHPPTWLVGVPTMLTLLLMHPLLAEVDMSR--LRLI 284
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
+ GG + L++ F +++ YG++ETS ++ TP Q Q
Sbjct: 285 VVGGSNVEPVLLQRLQQQFAGVSIMNLYGLSETSGAIAM---------TPWQADQ----- 330
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVC-SDG----SSHVGRILTRGAHVMLRYWDQFLAKPS 301
Q +GKP +L+V +DG + VG + RGA V+ Y Q +
Sbjct: 331 ------QALLHSIGKPLQGAQLRVAGADGEELRAGEVGELWFRGAGVIPAYVGQQQDEEV 384
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ G WL +GD+G +D+ G + L GR+ GG NVYP EVE V+ H G++ + +
Sbjct: 385 FAGG--WLHSGDLGLVDEQGLIHLKGRQKDMFIQGGFNVYPSEVEGVIASHAGVLMVAGI 442
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + L E+ + R +S N+E LL+ HCR++ L +K PR
Sbjct: 443 GVPDPVLGEVGRYYIVTRPG----------ASVNEEALLA------HCRQQ-LADYKLPR 485
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRRE 446
V +R PLT GKI++ +R E
Sbjct: 486 QLV-FRTELPLTPAGKIQKALLRAE 509
>gi|386713543|ref|YP_006179866.1| long-chain-fatty-acid--CoA ligase [Halobacillus halophilus DSM
2266]
gi|384073099|emb|CCG44590.1| long-chain-fatty-acid--CoA ligase [Halobacillus halophilus DSM
2266]
Length = 512
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 178/394 (45%), Gaps = 53/394 (13%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
S E +I +TSGTTG PKG +++H L ++ + DD + T P+ H+
Sbjct: 162 SLDSEDTAVILYTSGTTGKPKGAMLTHKNLYSNAVDVANYLQISSDDRVIATLPMFHVFC 221
Query: 121 LSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
L+ A+ A +M G + +PKF ++ E++ T VP + L G
Sbjct: 222 LTVALNAPIMNGGTVLIVPKFSPQNVFTIAEEYQATVFAGVPTMYNYLQ--------QTG 273
Query: 180 RDSVKKILN------GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 233
+D V N GG LP L++ N F ++ YG++E S TF
Sbjct: 274 KDKVHTFSNMRLCISGGSSLPVALLESFENQF-NVRISEGYGLSEASPVTTF-------- 324
Query: 234 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYW 293
P P+ G++ N + + V + V + VG ++ RG +VM Y+
Sbjct: 325 -NPLDRPRKAGSIGAN-IRNVENKVVDELGDEVPV-------GEVGELIVRGPNVMKGYY 375
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
+ + +V+ E WL TGD+ +D+ G ++V R+ I GG NVYP EVE VL HP
Sbjct: 376 -KLPEETAVTIREGWLYTGDMARVDEEGYFYIVDRKKDMILVGGYNVYPREVEEVLYNHP 434
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
I + VVG + L E V++ V S N ++ E L ++CRE +
Sbjct: 435 DITEVAVVGAPDPELGETVISFV---------------VSSNPS--INEEALHEYCRE-H 476
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 447
L +K P + + + P +TGKI R +R ++
Sbjct: 477 LAKYKVPSR-IEFMEELPKNTTGKILRKNLREKL 509
>gi|148652394|ref|YP_001279487.1| AMP-binding domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148571478|gb|ABQ93537.1| AMP-dependent synthetase and ligase [Psychrobacter sp. PRwf-1]
Length = 587
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 183/385 (47%), Gaps = 49/385 (12%)
Query: 67 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAM 125
A+ I FTSGTTG+PKG ++H L+ + + +D PL H + +
Sbjct: 232 AINIQFTSGTTGTPKGATLTHRNLLNNAYHLGETLCLTAEDKLCLPLPLYHCFAMVLGNL 291
Query: 126 AMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
ML GA V+ F+ S L+A+ + T L VP++ LA L S++
Sbjct: 292 TMLSHGATLVYPSSSFDPLSVLQAINEEKCTVLHAVPSMF--LAILNHPDFARFDLSSLR 349
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
++GG P ELM+ ++L AYGMTETS T
Sbjct: 350 TGVSGGASCPRELMQRIIKQMHMSELTIAYGMTETSPKAT-------------------- 389
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCS--DGSS----HVGRILTRGAHVMLRYWDQFLA 298
P + + + VG PH+E+KV +G + VG ILT+G VM YW+ +
Sbjct: 390 QTLPTTEFEKRIATVGVVQPHLEVKVVDPLNGQTLPIGEVGEILTKGYAVMQGYWNDPV- 448
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
K + + + W+ TGD+GS+D+ G + +VGR I GGEN+YP EVE L +HP I +
Sbjct: 449 KTAEAIVDGWMHTGDLGSMDEHGYITVVGRSKDMIIRGGENIYPIEVENFLYRHPKIADV 508
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
+VG+ +A E++ A W D++ L+ + +R C + + FK
Sbjct: 509 QIVGVPDAHYGEVLAA---------WIIPKADET-------LTEQEVRDFCYNQ-IAHFK 551
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEV 443
P ++ + + +P+T TGKI++ ++
Sbjct: 552 IPT-YIRFVEQYPMTVTGKIQKFKI 575
>gi|333920952|ref|YP_004494533.1| feruloyl-CoA synthetase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483173|gb|AEF41733.1| Feruloyl-CoA synthetase [Amycolicicoccus subflavus DQS3-9A1]
Length = 513
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 173/385 (44%), Gaps = 52/385 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG PKGV++SH+ L L +A + +D LH P+ H+ +
Sbjct: 163 VFYTGGTTGFPKGVLLSHANLQTSILGGLATGLFDKDSRILHATPMFHLADHFLWACGVS 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
+G HV +P F+ + L A+++H VT + +P ++ LA S++ + G
Sbjct: 223 LGGTHVIVPAFDPPAVLAAIQEHRVTETVLIPIMIQLLAD--HPAAAEHDLSSMRHLFYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G + ++ A +FP A+ + AYGMTE ++ T +T D T G
Sbjct: 281 GAPISRAVLDRAVAAFPHARFVQAYGMTEVAAIATMLTPGDHTDTLLG------------ 328
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVST 304
G+ PH E+++ VG I+ G HVML Y L KP +
Sbjct: 329 --------TAGRALPHSEVRIVDAEDLEVPRGTVGEIVVCGGHVMLGY----LNKPEETA 376
Query: 305 G---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ W+ TGD G +DD G V +V R I +GGENVY EVE + HP + V+
Sbjct: 377 AVLRDGWMHTGDGGFMDDAGYVHVVDRLKDMIITGGENVYSAEVENAISAHPAVALCAVI 436
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI + E V A + R ++ E +R+H + + G+K PR
Sbjct: 437 GIPDPTWGERVHAVIVCRAGRT----------------VTFEEIREHTKAL-IAGYKVPR 479
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRRE 446
+ + PL+ GKI + +R++
Sbjct: 480 SIEI-TESLPLSGAGKILKRALRKQ 503
>gi|52080516|ref|YP_079307.1| AMP-binding protein [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319645522|ref|ZP_07999754.1| YngI protein [Bacillus sp. BT1B_CT2]
gi|404489403|ref|YP_006713509.1| AMP-binding protein [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423682474|ref|ZP_17657313.1| AMP-binding protein [Bacillus licheniformis WX-02]
gi|52003727|gb|AAU23669.1| AMP-dependent synthetase and ligase [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|52348397|gb|AAU41031.1| aceto-acyl-CoA ligase YngI [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317392408|gb|EFV73203.1| YngI protein [Bacillus sp. BT1B_CT2]
gi|383439248|gb|EID47023.1| AMP-binding protein [Bacillus licheniformis WX-02]
Length = 545
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 183/388 (47%), Gaps = 47/388 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMV 130
+TSGTTG PKGV+++HS L + + + D P H G + +A +
Sbjct: 197 YTSGTTGFPKGVMLTHSNLANNAANIAECMNLSKKDRMCIPVPFFHCFGCVLGTLACVTA 256
Query: 131 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
GA V + +F K L AVE T+L VP + +A L S++ + G
Sbjct: 257 GATMVPVQEFSPKEVLSAVETEKCTALHGVPTMF--IAELNDPDFASYDLSSLRTGIMAG 314
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P E+MK+ ++ +++ AYG TE S +T N
Sbjct: 315 SNCPIEVMKKVIDNMGMSEITIAYGQTEASPVIT--------------------QTRVND 354
Query: 251 VHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVST 304
+ + VG+ P+VE+K+ G++ G + TRG HVM Y+ A +V
Sbjct: 355 SLKRRVETVGRALPNVEVKITEPGTNREVERGVQGELCTRGYHVMKGYYKNPEATAAVID 414
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
+ +L TGD+ +D+ G + GR I GGEN+YP E+E L +HP I+ + +VG+
Sbjct: 415 EDGFLHTGDLAVMDEEGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPDILDVQIVGVP 474
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ E V A ++L+ ++++ L+++C+ K + +K PR ++
Sbjct: 475 DETFGEEVSAWIKLKSGAS----------------MTADELKEYCKGK-IARYKIPR-YI 516
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ + FP+T++GK+++ ++R + + H +
Sbjct: 517 AFVEEFPMTASGKVQKFKLREQALEHFQ 544
>gi|167587926|ref|ZP_02380314.1| acyl-CoA synthetase [Burkholderia ubonensis Bu]
Length = 575
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 204/456 (44%), Gaps = 67/456 (14%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-------SDFVNK-RDMLTADILK--GYSLRSLPFTHSWA 63
+L +PSLR VSLG + +D + + R L D L G +L S+
Sbjct: 163 DLHAVRVPSLRTIVSLGEIAPAGMFRFADVMARGRAALDRDALDALGATLASI------- 215
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
+ I FTSGTTGSPKG +SH ++ + + + + E D PL H G+
Sbjct: 216 --DPINIQFTSGTTGSPKGATLSHRNVVNNARSIAQAMRFSEQDALCIPVPLYHCFGMVL 273
Query: 124 A-MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
A +A + GA VF + F+ + L AV T+L VP + +A L
Sbjct: 274 AVLACVSTGAAMVFPGEAFDPAATLAAVADERCTALHGVPTMF--IAELDHPDFAKYDLS 331
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P E MK + +++ AYGMTETS ++F + D LE
Sbjct: 332 SLRTGIMAGSPCPIETMKRVVSQMHLSEITIAYGMTETSP-VSFQSSTDDPLEM------ 384
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQF 296
+ VG+ PH+E+K+ V G + T+G VM YWD
Sbjct: 385 -------------RTTTVGRIQPHLEVKIVDPSGGIVPVGATGELCTKGYSVMRGYWDDD 431
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
V + W+ TGD+ ++D G +VGR + GGEN+YP E+E L +HP I
Sbjct: 432 EKTRDVLI-DGWMHTGDLATLDANGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQ 490
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
V G+ +A+ E V A + LR Q +E + +R C + +
Sbjct: 491 SAQVFGVPDAKYGEEVCAWIVLRAGEQLTEDD----------------VRAFC-QGQIAH 533
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+K PR ++ + P+T TGK+++ +R+ ++ LK
Sbjct: 534 YKIPR-YIRFVDELPMTVTGKVQKFVMRQRMIDELK 568
>gi|29828572|ref|NP_823206.1| AMP-binding domain protein [Streptomyces avermitilis MA-4680]
gi|29605676|dbj|BAC69741.1| putative acyl-CoA synthetase [Streptomyces avermitilis MA-4680]
Length = 540
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 173/388 (44%), Gaps = 49/388 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMA 126
V I +TSGTTG PKG +SH ++ VGY E+D PL H G+ A+
Sbjct: 185 VNIQYTSGTTGFPKGATLSHHNILNNGYWVGRTVGYTEEDRVCLPVPLYHCFGMVMGALG 244
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
GAC V P F+ + L AV++ TSL VP + +A L S++
Sbjct: 245 ATSHGACIVLPAPSFDPAATLAAVQRERCTSLYGVPTMF--IAELNLPDFASYDLSSLRT 302
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 303 GIMAGSPCPVEVMKRVVAEMHMAEVSICYGMTETSP-VSLQTRRDDDLE----------- 350
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAK 299
H+ VG+ PH+E+KV G + TRG VML YWD+
Sbjct: 351 ------HRTG--TVGRVLPHIEVKVVDPAGGVTVPRGTAGELCTRGYSVMLGYWDEPEKT 402
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
W+ TGD+ + + G V +VGR I GGEN+YP E+E L HP I +
Sbjct: 403 AEAVDAGRWMHTGDLAVMRENGYVEIVGRIKDMIIRGGENIYPREIEEFLYGHPKIADVQ 462
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VVG+ + R E V+ACV R+ + E L C + L +K
Sbjct: 463 VVGVPHERYGEEVLACVIPRDPADPP---------------TLEELWAFC-DGQLAHYKI 506
Query: 420 P-RLFVLWRKPFPLTSTGKIRRDEVRRE 446
P RL +L FP+T +GK+R+ E+R +
Sbjct: 507 PSRLRIL--DSFPMTVSGKVRKIELREQ 532
>gi|334342995|ref|YP_004555599.1| o-succinylbenzoate--CoA ligase [Sphingobium chlorophenolicum L-1]
gi|334103670|gb|AEG51093.1| o-succinylbenzoate--CoA ligase [Sphingobium chlorophenolicum L-1]
Length = 513
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 185/415 (44%), Gaps = 51/415 (12%)
Query: 39 KRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKI 98
+ D+L D+ + H W P +I FT GTTG+PKGV+ S AL+VQ
Sbjct: 131 QEDILAIDMSDLSTNGEAAARHVWQPGELALILFTGGTTGAPKGVMHSADALMVQGRNVQ 190
Query: 99 AIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLI 158
+ Y D V LH+ P HI G++ A+ + A VF + + + + V S+
Sbjct: 191 NCLSYDADTVALHSQPAFHIAGVNQLTALTLAAARIVFRADAGPPAVYQEIAANGVNSIG 250
Query: 159 TVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTE 218
VP +A L R ++ ++ G + +L+++ + P+A+L YG+TE
Sbjct: 251 AVPTTLAMLLASPDRDDALLAR--LQSVVYGAAPISEKLLRDVRAAMPQARLCQLYGLTE 308
Query: 219 TSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSSH 277
S ++ + L+ P L A GKP HVE+++ DG+
Sbjct: 309 -SGPISALLPEHHMLDDPDILRSA-----------------GKPRSHVEVRIAGPDGAPA 350
Query: 278 ----VGRILTRGAHVMLRYWDQFLAKPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRR 329
VG ++ RG V YW + + TGE+ W+ TGD G ID G + +V R
Sbjct: 351 GPDVVGEVMLRGHGVTSGYW-----QDAERTGELFTDGWMHTGDAGFIDGRGFLTIVDRY 405
Query: 330 NGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNC 389
I +GGENVY EVE ++ PG+ V G+ + E+V A V + Q
Sbjct: 406 KDMIVTGGENVYSGEVENIIAAFPGVAACAVYGVPDDFWGEIVTAAVVAKPGAQ------ 459
Query: 390 DQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+ + + HCR ++ G+K P+ + P PL++ GK+ + +R
Sbjct: 460 ----------IDPDAVIAHCR-AHIAGYKCPKAITVRDTPLPLSTLGKVLKHVLR 503
>gi|197105973|ref|YP_002131350.1| long-chain-fatty-acid--CoA ligase [Phenylobacterium zucineum HLK1]
gi|196479393|gb|ACG78921.1| long-chain-fatty-acid--CoA ligase [Phenylobacterium zucineum HLK1]
Length = 533
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 177/394 (44%), Gaps = 55/394 (13%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALI----VQSLAKIAIVGYGEDDVYLHTAPLCHIG 119
P + +TSGTTG PKGV+++H ++ + AK+ +G DD+ L P+ HIG
Sbjct: 170 PHDVAVQLYTSGTTGRPKGVMLTHENILGGRRTAAEAKMDWNTWGPDDISLVAMPVAHIG 229
Query: 120 GLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
G + LM GA V +F+ L+ +E V+ + VPA + + R +
Sbjct: 230 GTGWGLVGLMNGAKGVVAREFDPMKVLDFIEHDRVSKMFMVPAALQIVVRQPRARSVDFS 289
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
R +K IL G +P +L++E F + YGMTET ++ ++
Sbjct: 290 R--LKYILYGASPIPLDLLRECMEVF-GCGFVQQYGMTETCGTIVYL------------- 333
Query: 240 PQAFGNVTPNSVHQPQG----VCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVML 290
P H P G G P P VE+KV ++G + VG + TR M
Sbjct: 334 --------PPEDHDPAGNPRMRAAGVPMPGVEIKVIDAEGRTLPLGQVGEVATRSVANMA 385
Query: 291 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 350
YW Q A + + WL TGD G +D+ G +++ R I SG EN+YP EVE+ +
Sbjct: 386 GYWKQREATANTIDADGWLRTGDAGYLDEDGYLYIHDRVKDMIISGAENIYPAEVESAIY 445
Query: 351 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 410
HP + + V+G+ + + E V A V + + + + + R
Sbjct: 446 GHPAVSEVAVIGVPDEKWGEAVKAVVVPKPG----------------MTIDPQEIIAFAR 489
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+ + GFK P+ V + P ++GKI R E+R
Sbjct: 490 TR-IAGFKVPK-SVEVVEAIPRNASGKILRRELR 521
>gi|333919932|ref|YP_004493513.1| feruloyl-CoA synthetase [Amycolicicoccus subflavus DQS3-9A1]
gi|333482153|gb|AEF40713.1| Feruloyl-CoA synthetase [Amycolicicoccus subflavus DQS3-9A1]
Length = 514
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 177/389 (45%), Gaps = 48/389 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIA---IVGYGEDDVYLHTAPLCHIGGLSSAMA 126
+ +T GTTG+PKGV++SH+ L+ +L +A +G LH AP+ H+ + +
Sbjct: 163 VFYTGGTTGAPKGVMLSHTNLVSAALGGLASGNFFRHGATPRSLHVAPMFHLADFAFFLM 222
Query: 127 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 186
+ G ++ +P F+ + L + H VT + VP ++ LA ++ I
Sbjct: 223 TSIAGGTNIAVPMFDPQKVLGLIGTHEVTDTLLVPTMIQMLADHPSAPSF--DVSHLRTI 280
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
G + L+ A +P + AYGMTE S+ T + D ++ET
Sbjct: 281 AYGASPISPALLGRAKKVWPGVDFVQAYGMTELSALATILPAADHSIET----------- 329
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCS-DGSSH----VGRILTRGAHVMLRYWDQFLAKPS 301
+ G +P E+++ + DG+ VG IL RG VM YW Q +
Sbjct: 330 --------RQRSAGATSPTSEIRIAAEDGTDAPRGAVGEILVRGPQVMRGYW-QKPEETE 380
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ + W+ TGD G +DD G +++V R I +GGENVY EVE L QHP + V+
Sbjct: 381 EALRDGWMHTGDAGYLDDDGYLYIVDRLKDMIITGGENVYSSEVENALAQHPAVAACAVI 440
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + R E V A V + ++++ L++H R + G+K PR
Sbjct: 441 GLPDERWGERVHAVV----------------VPAPQTTVTADELQEHTRAL-IAGYKVPR 483
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
V + + P++ GKI + +R V
Sbjct: 484 -SVSFAESLPISGAGKILKRSLRDTVQQQ 511
>gi|378716736|ref|YP_005281625.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans VH2]
gi|375751439|gb|AFA72259.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans VH2]
Length = 561
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 183/401 (45%), Gaps = 55/401 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH + ++ Y DD P H G + +A
Sbjct: 199 IQYTSGTTGFPKGATLSHRNIGNNGYLVGELLDYSADDRICIPVPFYHCFGMVMGNLAAT 258
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKI 186
GA V P F+ ++AL AV H TSL VP + +A+LA L + +++
Sbjct: 259 SHGATMVIPSPTFDPEAALRAVADHKCTSLYGVPTMFIAELALLDSGAEF--DLSTLRTG 316
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
+ G P +M++ + ++ YGMTETS T + DP G
Sbjct: 317 IMAGSPCPEHVMRQVVDRMHMGQVSICYGMTETSPVSTQTRMDDPLELRVG--------- 367
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ----- 295
VG+ PH+E+KV S G TRG VM YW+Q
Sbjct: 368 -----------TVGRVGPHLEVKVIDPVSGETLRRGETGEFCTRGYSVMSGYWNQPDKSA 416
Query: 296 --FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
+ +P+ G W+ TGD+ +D G V + GR + GGEN+YP E+E L HP
Sbjct: 417 EVLIPEPTDPQGSPWMRTGDLAVMDPNGYVRITGRIKDMVIRGGENIYPREIEEFLYTHP 476
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
I+ V+G+ + + E ++A +RLR D +S+ L+++ +R+ K
Sbjct: 477 DILDAQVIGVPDEKYGEELMAWIRLR----------DGASE-----LTADDVREFATGK- 520
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
+ K PR FV K FP+T TGK+R+ ++R E + L +L
Sbjct: 521 IARHKIPR-FVHVVKEFPMTVTGKVRKVQMREESVEILGTL 560
>gi|453078814|ref|ZP_21981540.1| long-chain-fatty-acid--CoA ligase [Rhodococcus triatomae BKS 15-14]
gi|452755967|gb|EME14385.1| long-chain-fatty-acid--CoA ligase [Rhodococcus triatomae BKS 15-14]
Length = 475
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 187/434 (43%), Gaps = 70/434 (16%)
Query: 12 YLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIIC 71
+L+L HT LG K D LTA PF A E I
Sbjct: 111 FLDLDHT----------LGVDVPVIDVKSDFLTA---------GEPFECEIAGEDIADIM 151
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMV- 130
+TSGTTG PKGV+++H + + E D YL P H+ G + + M+
Sbjct: 152 YTSGTTGRPKGVMMNHLQTLRMFSEWCDLADLREGDRYLIVNPFFHMFGYKAGLVASMIR 211
Query: 131 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
GA + + + + L+ VE+ +T L P + L + R + S++ + G
Sbjct: 212 GATVLPVAVLDVEDVLDLVEREKITMLPGPPTLYQSLLSASRDRDL----SSLRAAVTGS 267
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
+P EL+K N P +++ YG++E ++ T PG
Sbjct: 268 ADIPVELIKRIKNELPFETIMTGYGLSEGGTA---------TASRPG------------D 306
Query: 251 VHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 310
+ VG P +++++ DG +L RG +VM Y D A + WL
Sbjct: 307 TFEQIATTVGTPCDGIDVRIADDGE-----VLIRGYNVMQGYLDDPGATAEAIDADGWLH 361
Query: 311 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 370
TGD+G +D GG + + GR+ GG N YP E+E L+HP + + V+G+ + RL +
Sbjct: 362 TGDLGELDAGGRLRINGRKKDMFIVGGFNAYPAEIEGFFLEHPDVDQVAVIGVPDERLGQ 421
Query: 371 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 430
+ A V + +++E L RE+ + GFKAPR FV +
Sbjct: 422 VGKAFVVPKRP------------------VAAEDLIAWGRER-MAGFKAPR-FVEFLDAL 461
Query: 431 PLTSTGKIRRDEVR 444
PL +TGK+ +D++R
Sbjct: 462 PLNATGKVMKDQLR 475
>gi|423454572|ref|ZP_17431425.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG5X1-1]
gi|401135541|gb|EJQ43138.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG5X1-1]
Length = 496
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 198/433 (45%), Gaps = 56/433 (12%)
Query: 26 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 85
+++L +V + +L+ LK RS + + IIC+TSGTTG+PKG V+
Sbjct: 112 NIALSMEKESYVQR--VLSIKNLKRIENRSNHYFEDINENASFIICYTSGTTGTPKGAVL 169
Query: 86 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKS 144
+ + +L + D + PL HIGG+ A L G + KFE +
Sbjct: 170 TQKNMFWNALNNTFAIDLTIHDRSIVLLPLFHIGGIGLFAFPTLFAGGIIIIPRKFEPIT 229
Query: 145 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 204
AL +E+H VT ++ VP I L + + T SV+ NGG P EL++E +
Sbjct: 230 ALSMIEKHKVTVVMGVPTIHQALINCSKFEST--NLQSVRWFYNGGAPCPEELIREFID- 286
Query: 205 FPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 263
+ L +GMTETS ++ ++ D + +GKP
Sbjct: 287 --RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------IGKPV 323
Query: 264 PHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 317
+ V DG+ + VG ++ RG +VM YW++ A G WL TGD+ +
Sbjct: 324 LFCDY-VLIDGNKNKVEVGEVGELIIRGPNVMKEYWNRPDATEETIQGG-WLHTGDLAKV 381
Query: 318 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 377
D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG + + E+ +A V
Sbjct: 382 DEDGFVYIVGRKKEMIISGGENIYPLEVEQVINRLSDVCEVAVVGTQHLQWGEIPIAFV- 440
Query: 378 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 437
K+ +L EV+ +HC L +K P+ V + P +TGK
Sbjct: 441 --------------VKKSSSVLTEKEVI-EHCL-LFLAKYKIPKEIVFLEE-LPKNATGK 483
Query: 438 IRRDEVRREVMSH 450
I++ ++ ++ S
Sbjct: 484 IQKVQLANQLKSR 496
>gi|389876831|ref|YP_006370396.1| putative long-chain-fatty-acid CoA ligase [Tistrella mobilis
KA081020-065]
gi|388527615|gb|AFK52812.1| putative long-chain-fatty-acid CoA ligase [Tistrella mobilis
KA081020-065]
Length = 519
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 182/381 (47%), Gaps = 40/381 (10%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG KGV++SH +I SL +A + + VYLH+AP+ H+ ++ ++LM
Sbjct: 163 IFYTGGTTGRSKGVMLSHENIISNSLHSLAEGLFPDGTVYLHSAPMFHLADGAATFSLLM 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G HV +P F + ++A+++H VTS + VP ++ L + S+K+I+ G
Sbjct: 223 KGEPHVIVPSFTPEGVMKAIQEHKVTSALLVPTMIQMLVDHPAIGNY--DLSSMKRIIYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA-FGNVTP 248
+ ++ AT P + + AYGMTE S T + PQ G
Sbjct: 281 AAPITEAVLDRATAKLPGVEFMQAYGMTELSPVATLLH------------PQEHVGESRA 328
Query: 249 NSVHQPQG-VCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
H+ G +G V+ VG ++ RG +VM+ YW+ +P + +
Sbjct: 329 KGRHRSAGRAVIGCEVRIVDADDRPVPVGEVGEVVVRGRNVMMGYWE----RPEETAKAI 384
Query: 308 ---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
W+ TGD +D+ G +++V R I SGGENVY EVE V+ +HP + V+GI
Sbjct: 385 VDGWMHTGDGARMDEDGFIYIVDRVKDMIISGGENVYSLEVENVVARHPDVAQCAVIGIP 444
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ E+V A V D +E++ +QH + G+K PR
Sbjct: 445 DEHWGEIVHAVV---------VPKSDARPTAEEII---AFCKQH-----IAGYKCPRSVE 487
Query: 425 LWRKPFPLTSTGKIRRDEVRR 445
+ +P P++ GKI + ++R+
Sbjct: 488 IRDEPLPMSGAGKILKRDLRK 508
>gi|284041712|ref|YP_003392052.1| AMP-dependent synthetase and ligase [Conexibacter woesei DSM 14684]
gi|283945933|gb|ADB48677.1| AMP-dependent synthetase and ligase [Conexibacter woesei DSM 14684]
Length = 545
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 178/393 (45%), Gaps = 50/393 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMA 126
+ I +TSGTTG+PKG +SH L+ ++ Y E D P H G + +A
Sbjct: 184 IDIQYTSGTTGAPKGATLSHHNLLNNGFLVGELIHYSEHDRICLPVPFYHCFGMVMGNLA 243
Query: 127 MLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
GAC V IP F+ + L AV Q TSL VP + +A L S++
Sbjct: 244 ATSHGACMV-IPSAGFDPLATLRAVAQERCTSLYGVPTMF--IAELEHPSFAEHDLSSLR 300
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E+MK+ + ++ YGMTETS T DP G
Sbjct: 301 TGIMAGSPCPIEVMKQVIDKMHMREVSICYGMTETSPVSTQTRTDDPLELRVGS------ 354
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 298
VG+ PHVE+KV + + G + TRG VML YW +
Sbjct: 355 --------------VGRVGPHVEVKVVEPDTGMIVKRGETGELRTRGYSVMLGYWGELEK 400
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
W+ TGD+ ++DD G V +VGR + GGENVYP E+E +L H ++ +
Sbjct: 401 TAEAIDAAGWMHTGDLATMDDAGYVAIVGRIKDMVIRGGENVYPRELEELLHLHDDVVDV 460
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG+ +A+ E + A VRLR+ E + +R CRE+ + FK
Sbjct: 461 QVVGVPDAKYGEELCAWVRLRDGAAVGEDD----------------VRAFCRER-VAHFK 503
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
PR VL+ FP+T TGK+++ ++R + L
Sbjct: 504 VPR-HVLFVDEFPMTVTGKVQKYKMREATIERL 535
>gi|170691767|ref|ZP_02882931.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
gi|170143051|gb|EDT11215.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
Length = 533
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 180/401 (44%), Gaps = 56/401 (13%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
PE + +TSGTTG PKG + +H + + + D LH APL H+GG+ +
Sbjct: 171 PEDISALVYTSGTTGRPKGAIHTHGNDVAIATNCVMEYSLTSTDSALHIAPLYHVGGMQA 230
Query: 124 A-MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
M LMVGA ++ +P+++ + L A+ +H +T+L VP + D+ L S
Sbjct: 231 YFMPHLMVGAANIVLPRYDPERTLAAIGEHRITTLFAVPTQIQDM--LFHPSFARTDHSS 288
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ I GG +P+ M+ + F + + YGMTE +SLT +
Sbjct: 289 LRMITTGGAAIPAAAMQRVIDEF-CPNVYNGYGMTE--ASLTLL---------------- 329
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------------HVGRILTRGAHVML 290
+ P G C GKP +V ++ + VG+++ RG +
Sbjct: 330 ---LHPRDALSRLGSC-GKPTLISTCRVVTNDTERVVPSTESVAPGEVGQLIVRGPQLAR 385
Query: 291 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 350
YW+ + + + + WL TGD+ S+D GG GR + I SGGEN+YP EVE VL
Sbjct: 386 AYWNNPV-ETAKKFRDGWLYTGDLFSVDAGGYFHFHGRADDMIVSGGENIYPREVEEVLY 444
Query: 351 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 410
PG+ V+G+ + + + V A V +R Q +E K +
Sbjct: 445 HCPGVQEAAVIGVPDPKWGQAVTAFV-VRSDAQLTEDAVIAFCKASD------------- 490
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+L +K P+ +L+ PL +GK+ R E+ V L
Sbjct: 491 --DLAPYKRPKK-ILFVDRLPLNPSGKVLRRELAASVAEEL 528
>gi|421154052|ref|ZP_15613578.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 14886]
gi|404522671|gb|EKA33148.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 14886]
Length = 564
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 177/392 (45%), Gaps = 47/392 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH ++ +G G +D + PL H G + + +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLGAEDRLVIPVPLYHCFGMVMGNLGCV 265
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ P F++++ L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTMIYPAPSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 324 MAGATCPIEVMRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E K+ +G + TRG VML YW+ A
Sbjct: 374 ----------TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEA 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ TGD+ +DD G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDPARWMHTGDLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + R E +VA ++L + E LR C+ + + FK PR
Sbjct: 484 IPDERYGEDIVAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRH 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
F + FP+T TGKI++ +R + ++ L
Sbjct: 527 FRFVDE-FPMTVTGKIQKFRMREISIEEIRLL 557
>gi|419967656|ref|ZP_14483537.1| CoA synthetase [Rhodococcus opacus M213]
gi|414566929|gb|EKT77741.1| CoA synthetase [Rhodococcus opacus M213]
Length = 511
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 177/378 (46%), Gaps = 40/378 (10%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-M 127
++ ++SGTTG+PKGV++SH ++ +L ++ + L APL HIGG+ A+
Sbjct: 163 VLMYSSGTTGAPKGVMLSHGNMLWNALNQLLAQDMTSKERTLSVAPLFHIGGIGGAVTPT 222
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
L+ G V + KF++ L+ +E+ +T+ VP ++ +L R S++ I
Sbjct: 223 LLNGGTVVLLRKFDAGVVLDTIEKERITTFFAVPTMIQELWHHPRFADA--DLSSLRAIC 280
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G LP L+ + + AYG+TET+ S+T ++ D + + F T
Sbjct: 281 VAGAPLPEALISPWQDR--DVAITQAYGLTETAPSVTMLSSADVRTKIGSAGKRTF--FT 336
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
V +P G PH +G I+ +G +VML Y +Q A +
Sbjct: 337 DVDVVRPDGSSA---EPH-----------EIGEIVAKGPNVMLGYLNQPEATARTIV-DG 381
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
WL TGD G DD G +++ R SGGENVYP EVEA LL+ GI V+G+ + +
Sbjct: 382 WLHTGDAGYFDDEGFLFICDRYKDMYISGGENVYPAEVEAALLRLEGIREAAVIGVPHEK 441
Query: 368 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 427
W E+ L + +R REK L GFK P F+
Sbjct: 442 ----------------WGETGMAFVVAADGTTLDEDTVRVRLREK-LAGFKIP-TFIQIA 483
Query: 428 KPFPLTSTGKIRRDEVRR 445
+ P T+TGKIR+ ++R+
Sbjct: 484 EALPRTATGKIRKPDLRK 501
>gi|56478075|ref|YP_159664.1| AMP-binding protein [Aromatoleum aromaticum EbN1]
gi|56314118|emb|CAI08763.1| putative long chain fatty-acid CoA ligase [Aromatoleum aromaticum
EbN1]
Length = 562
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 201/448 (44%), Gaps = 55/448 (12%)
Query: 15 LQHTAIPSLRWHVSLGSS-SSDFVNKRDML---TADILKGYSLRSLPFTHSWAPEGAVII 70
L+ +PSL W + +G+ S+ +N D+L + D L ++R + + I
Sbjct: 151 LEAARMPSLNWVIRMGAEKSAGMLNFDDLLAPPSRDELVELAIRGEKLQF----DDPINI 206
Query: 71 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLM 129
FTSGTTG PKG +SH ++ + E D PL H G+ + +
Sbjct: 207 QFTSGTTGQPKGATLSHHNILNNGFFVGEAIRLVEGDRVCIPVPLYHCFGMVMGNLGCVT 266
Query: 130 VGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
GA V+ + FE + LE + + T+ VP + + R R ++ +
Sbjct: 267 HGATMVYPAEAFEPVAVLETLAEERCTAAYGVPTMFIAMLDHPRFGDFDLSR--LRTGIM 324
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G P E+MK + ++ AYGMTETS P +F + T
Sbjct: 325 AGSPCPIEVMKRVIDRMNMREVTIAYGMTETS-------------------PVSFQSGTG 365
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
+ V + + VG+ PH+E+K+ + V G + TRG VML YW+
Sbjct: 366 DPVER-RVSTVGRVQPHLEVKIVDNDGRIVPRGVAGELCTRGYSVMLGYWNDVDRTRDAI 424
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +HP I+ + VVG+
Sbjct: 425 DAAGWMHTGDLATIDDEGYCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKILDVQVVGV 484
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E + A + +RE LS++ +R C + + K PR +
Sbjct: 485 PDQKYGEELCAWIIVREGEA----------------LSADEVRAFC-QGQIAHHKVPR-Y 526
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ + FP+T TGKI++ ++R ++ L
Sbjct: 527 IKFVDSFPMTVTGKIQKFQIREQMKREL 554
>gi|421521513|ref|ZP_15968167.1| acyl-CoA synthetase [Pseudomonas putida LS46]
gi|402754665|gb|EJX15145.1| acyl-CoA synthetase [Pseudomonas putida LS46]
Length = 557
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 174/382 (45%), Gaps = 47/382 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG +SHS ++ +G E D + PL H G+ A M
Sbjct: 206 IQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHDRLVVPVPLYHCFGMVMANLGCM 265
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ P F+ + L AV Q T+L VP + +A L ++ S++ +
Sbjct: 266 THGSALIYPSDAFDPLATLRAVAQEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T LE VT
Sbjct: 324 MAGATCPIEVMRRVIGEMHMAEVQIAYGMTETSP-VSLQTGAADDLER---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E KV ++G++ +G + TRG VML YW+ A
Sbjct: 374 ----------SVGRTQPRLESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAES 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
E W+ TGD+ +D+ G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDAEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ ++ E +VA VRL SE E LR+ R + + FK PR
Sbjct: 484 VPCSKYGEEIVAWVRLHPGHAVSE----------------EALREWARAR-IAHFKVPRY 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVR 444
F + FP+T TGK+++ +R
Sbjct: 527 F-RFVDAFPMTVTGKVQKFRMR 547
>gi|392410413|ref|YP_006447020.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfomonile
tiedjei DSM 6799]
gi|390623549|gb|AFM24756.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfomonile
tiedjei DSM 6799]
Length = 501
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 179/384 (46%), Gaps = 34/384 (8%)
Query: 19 AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
AI +LR ++ + + + D+ + LKG S ++ S + II +TSGTTG
Sbjct: 113 AIQALRTNIPIRNFIRKGSDGSDIEFEEALKGRS--AVDPECSAGGDDPAIIMYTSGTTG 170
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 138
PKG V++H L S A + + D +L APL HIGGL+ + + G+ F+P
Sbjct: 171 KPKGAVLTHDNLFWSSTAISHTIEWNYDHRFLSIAPLFHIGGLAPLITNVHKGSTTFFMP 230
Query: 139 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 198
F+ + + +T++++VP ++ A L+ K S+K I G +P L+
Sbjct: 231 NFDPVAVWNTIATERITTMMSVPLMLQ--AMLMVAKARTVDASSLKTITCGASSVPESLI 288
Query: 199 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 258
+ + K+ YG+TE S ++TF T P ++ Q
Sbjct: 289 RAYLDM--GVKVQQVYGITEYSGAVTFWTHDMPLEKSNSQ-------------------- 326
Query: 259 VGKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 312
GKP H +LK+ S VG IL +G V YWD A + + W +G
Sbjct: 327 -GKPVFHGDLKIVDPQSGVPLPTGEVGEILCKGPMVFKEYWDNPEATRAAFV-DGWYRSG 384
Query: 313 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 372
D+G +D G ++V R I SGGEN+YP E+EAV+ PG+ VVG+ ++R E+
Sbjct: 385 DLGRVDTEGFFYVVDRLKDMIISGGENIYPAELEAVICMCPGVAETAVVGLPDSRWGEIP 444
Query: 373 VACVRLRESWQWSESNCDQSSKNK 396
VA V ++ Q S + K +
Sbjct: 445 VAYVVVKPDQQVSAEDIMNVCKQR 468
>gi|384214527|ref|YP_005605691.1| hypothetical protein BJ6T_08100 [Bradyrhizobium japonicum USDA 6]
gi|354953424|dbj|BAL06103.1| hypothetical protein BJ6T_08100 [Bradyrhizobium japonicum USDA 6]
Length = 564
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 180/391 (46%), Gaps = 47/391 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MA 126
V I FTSGTTGSPKGV ++H ++ + E D PL H G+ +A
Sbjct: 206 VNIQFTSGTTGSPKGVTLTHHNILNNGYFTGRAMHLTEQDRICIPVPLYHCFGMVMGNLA 265
Query: 127 MLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ +G V+ + F+ + L AVEQ T+L VP + +A L + S++
Sbjct: 266 SVTLGTTMVYPGEGFDPLATLRAVEQEKCTALYGVPTMF--IAELDHPEFPKFDLTSLRT 323
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+MK ++ AYGMTETS P +F +
Sbjct: 324 GIMAGAPCPIEVMKRVNTEMNMREVTIAYGMTETS-------------------PVSFQS 364
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKP 300
T + + + + VG+ PHVE+KV V G + TRG +ML YW++
Sbjct: 365 ATDDPLER-RVSTVGRIHPHVEVKVVDLEGRIVKRGERGELCTRGYSIMLGYWEEKEKTA 423
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
V W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +HP I + +
Sbjct: 424 DVLDANGWMHTGDLATIDDEGYCNIVGRIKDLVIRGGENLYPREIEEFLYRHPKIQDVQI 483
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
G+A+ R E + A +R+R L++E +R C + + K P
Sbjct: 484 FGVADTRYGEELCAWIRVRPGET----------------LTAEEVRAFC-DGQIAHNKIP 526
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
R +V + FP+T TGKI++ +R V L
Sbjct: 527 R-YVEFVDEFPMTVTGKIQKFVMRDAVEQRL 556
>gi|398818617|ref|ZP_10577200.1| O-succinylbenzoate-CoA ligase [Brevibacillus sp. BC25]
gi|398027219|gb|EJL20777.1| O-succinylbenzoate-CoA ligase [Brevibacillus sp. BC25]
Length = 508
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 184/401 (45%), Gaps = 52/401 (12%)
Query: 52 SLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLH 111
S S P + + IIC+TSGTTG PKG V++ + ++ +A + +D +
Sbjct: 145 SQHSRPEADDGSGDDPYIICYTSGTTGKPKGAVLTQENMFWNAVHNVAALDLTSEDCSIV 204
Query: 112 TAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATL 170
PL HIGG+ A + G V KF+ A++ +E H VT ++ VPAI +
Sbjct: 205 LLPLFHIGGIGLFAFPTWLAGGRVVVAGKFDPDKAIQLIETHRVTIVMGVPAIHEAIRQS 264
Query: 171 IRVKKTWKGRDSVKKILNGGGGLPSELMKE-ATNSFPKAKLISAYGMTETSSSLTFMTLY 229
T DSV+ NGG P EL++ P + YG+TETS ++ FM
Sbjct: 265 PLFATT--SFDSVRWFYNGGAPCPMELIQNFQERGLPFGQ---GYGLTETSPTV-FMIAK 318
Query: 230 DPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTR 284
+ G +GKP E+++ SD G +G +L +
Sbjct: 319 EDAKRKAG--------------------SIGKPVMFCEVRLISDDGKDVGQGEIGELLVK 358
Query: 285 GAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEE 344
G +VM YW++ + + + + WL TGD+ D+ G ++VGRR I SGGEN+YP E
Sbjct: 359 GPNVMKEYWNR-PEETAKTIRDGWLYTGDLARFDEEGFAYIVGRRKEMIISGGENIYPLE 417
Query: 345 VEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEV 404
+E V+ + G+ VVG+ + + E+ + + ++++
Sbjct: 418 LEQVIGELDGVQEAAVVGVPDEKWGEVAKVFIVPKSG----------------VVITEAH 461
Query: 405 LRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
++ HC E+ L +K P+ FV + P +TGKI + + R
Sbjct: 462 IKAHC-EQRLAKYKIPKSFVFLTE-LPRNATGKIIKQALTR 500
>gi|221214286|ref|ZP_03587258.1| AMP-binding domain protein [Burkholderia multivorans CGD1]
gi|221165941|gb|EED98415.1| AMP-binding domain protein [Burkholderia multivorans CGD1]
Length = 575
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 205/457 (44%), Gaps = 69/457 (15%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADIL-------KGYSLRSLPFTHSWAPEG 66
EL+ +PSLR VS+G D AD++ +L +L T A
Sbjct: 163 ELRAARVPSLRTVVSMG----DVAPPGMFRFADVIARGRASVDSAALDALGAT--LAATD 216
Query: 67 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-M 125
+ I FTSGTTGSPKG ++H ++ + + + E D PL H G+ A +
Sbjct: 217 PINIQFTSGTTGSPKGATLTHRNVVNNARFIARAMRFSEQDALCIPVPLYHCFGMVLAVL 276
Query: 126 AMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
A + GA VF + F+ + L AV + T+L VP + +A L + +++
Sbjct: 277 ACVSTGAAMVFPGEAFDPVATLAAVAEERCTALHGVPTMF--IAELDHPEFAKFDLSTLR 334
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E MK + +++ AYGMTETS P +F
Sbjct: 335 TGIMAGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSFQ 375
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 299
+ T + + + + VG+ PH+E+K+ G V G + T+G VML YWD
Sbjct: 376 SSTDDPLEK-RTTTVGRVQPHLEVKIVDPGGEIVPVGVTGELCTKGYSVMLGYWDD---- 430
Query: 300 PSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
T EV W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I
Sbjct: 431 -DAKTREVLIDGWMHTGDLATLDAEGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKI 489
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
V G+ + + E + A + LR Q +E + +R C + +
Sbjct: 490 QSAQVFGVPDPKYGEELCAWIVLRADEQMTEDD----------------VRAFC-QGQIA 532
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+K PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 533 HYKIPR-YIRFVDELPMTVTGKVQKFVMRERMIDELK 568
>gi|290956371|ref|YP_003487553.1| long-chain-fatty-acid-CoA ligase [Streptomyces scabiei 87.22]
gi|260645897|emb|CBG68988.1| putative long-chain-fatty-acid-CoA ligase [Streptomyces scabiei
87.22]
Length = 530
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 169/384 (44%), Gaps = 49/384 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E D P H G+ +A
Sbjct: 181 IQYTSGTTGFPKGATLSHHNILNNGYFVGESLAYTEQDRICVPVPFYHCFGMVMGNLAAT 240
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GAC V P F+ + LEAV Q TSL VP + +A L S++ +
Sbjct: 241 SHGACVVIPAPSFDPGATLEAVRQERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGI 298
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK ++ YGMTETS T T D LE
Sbjct: 299 MAGSPCPVEVMKRVVTEMHMREVAICYGMTETSPVST-QTRRDDDLEH------------ 345
Query: 248 PNSVHQPQGVCVGKPAPHVELKVC------SDGSSHVGRILTRGAHVMLRYWDQFLAKPS 301
+ VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 346 -------RTATVGRVLPHIEVKVVDPVTGVTQPRGTAGELCTRGYSVMLGYWNEPEKTAE 398
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ ++ + G V +VGR I GGEN+YP E+E L HP I + VV
Sbjct: 399 AVDAGRWMHTGDLATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYGHPKIADVQVV 458
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + R E V+ACV E + L+ E LR +C E L +K P
Sbjct: 459 GVPHERYGEEVLACVVPHEGAE---------------PLTLEELRAYC-EGRLAHYKIPS 502
Query: 422 -LFVLWRKPFPLTSTGKIRRDEVR 444
L VL FP+T +GK+R+ E+R
Sbjct: 503 ALRVL--DSFPMTVSGKVRKIELR 524
>gi|149179825|ref|ZP_01858330.1| acyl-CoA synthase [Bacillus sp. SG-1]
gi|148852017|gb|EDL66162.1| acyl-CoA synthase [Bacillus sp. SG-1]
Length = 547
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 214/478 (44%), Gaps = 81/478 (16%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH 60
+L+ D+ D+ Y+E+ + P L+ S + +KR +++ S + T+
Sbjct: 111 ILLMDQYRDASYIEMLYEICPELK-----DSQPGNLESKRLPALRNVIV-LSEKRYSGTY 164
Query: 61 SWA----------------------PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKI 98
+W PE + + +TSGTTG PKGV+++H+ ++ +
Sbjct: 165 NWEDILQMAASVEETELDERMSDLHPEDVINMQYTSGTTGFPKGVMLTHNNIVNNAYNIA 224
Query: 99 AIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSL 157
+ +D P H G + MA + VGA V + +F+ + L+ V+ T L
Sbjct: 225 QCMRLTNEDRLCIPVPFFHCFGCVLGTMACVSVGAAMVPVQEFDPGTVLQTVQDEKCTGL 284
Query: 158 ITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 217
VP + +A L S++ + G P E+MK + ++ AYG T
Sbjct: 285 HGVPTMF--IAELNHPGFDQFDLSSLRTGIMAGSNCPIEVMKGVIDRMGADEITIAYGQT 342
Query: 218 ETSSSLTFMTLYDPT---LETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG 274
E+S +T DP +ET VG+ P+VE+KV G
Sbjct: 343 ESSPVITQTRTDDPIELRVET-----------------------VGRALPNVEVKVVQPG 379
Query: 275 SSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 328
+ G + TRG VM Y+ A + + WL TGD+ +D+ G + GR
Sbjct: 380 TDEEVPFGVQGELCTRGYLVMKGYYKNEEATAAAIDSDGWLHTGDLAVMDENGYCRITGR 439
Query: 329 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 388
I GGEN+YP E+E L HP ++ + VVGI + E V+A V L+E
Sbjct: 440 LKDMIIRGGENIYPREIEEFLYTHPKVLDVQVVGIPDKVYGEEVMAWVILKEG------- 492
Query: 389 CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
Q++ S++ LR++C+ K ++ K PR ++ + +P+T++GKI++ ++R+E
Sbjct: 493 --QTA-------SADELREYCKGK-ISRHKVPR-YIEFTDAYPMTASGKIQKYKLRKE 539
>gi|452975963|gb|EME75780.1| AMP-binding domain protein [Bacillus sonorensis L12]
Length = 545
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 180/388 (46%), Gaps = 47/388 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMV 130
+TSGTTG PKGV+++H L ++ + +D P H G + +A + V
Sbjct: 197 YTSGTTGFPKGVMLTHYNLANNAVNIAECMNLTANDRMCIPVPFFHCFGCVLGNLACVTV 256
Query: 131 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
GA V + +F + L+ VE T+L VP + +A + S++ + G
Sbjct: 257 GATMVPVQEFSPREVLKTVESERCTALHGVPTMF--IAEMNDEDFASYNLSSLRTGIMAG 314
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P+E+MK +++ AYG TE S +T ++D
Sbjct: 315 SNCPTEVMKGVIEKMGISEITIAYGQTEASPVITQTRVHDSL------------------ 356
Query: 251 VHQPQGVCVGKPAPHVELKVCS-DGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVST 304
+ + VG+ PH+E+K+ D + V G + TRG HVM Y+ A +
Sbjct: 357 --KRRVETVGRALPHIEVKITDPDNNREVERGRQGELCTRGYHVMKGYYKNPQATAAAID 414
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
E +L TGD+ +DD G + GR I GGEN+YP E+E L QHP I+ + VVG+
Sbjct: 415 DEGFLHTGDLAVMDDDGYCRITGRLKDMIIRGGENIYPREIEEFLYQHPKILDVQVVGVP 474
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ E V A ++L KN E + E+ R++C+ K + +K PR V
Sbjct: 475 DETFGEEVSAWIKL---------------KNGEHATAEEI-REYCKGK-IARYKIPR-HV 516
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMSHLK 452
++ FP+T++GK+++ ++R + K
Sbjct: 517 VFVDEFPMTASGKVQKFKLREQAHEMFK 544
>gi|421596800|ref|ZP_16040540.1| AMP-dependent synthetase and ligase [Bradyrhizobium sp. CCGE-LA001]
gi|404271089|gb|EJZ35029.1| AMP-dependent synthetase and ligase [Bradyrhizobium sp. CCGE-LA001]
Length = 518
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 175/384 (45%), Gaps = 46/384 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG KGV++SH L+ +L + + +YLH AP+ H+ ++ ++L+
Sbjct: 162 IFYTGGTTGRSKGVMLSHHNLMANALNALGEGLFPGSAIYLHAAPMFHLANGAAMYSLLL 221
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G +V + F + + A++ VT ++ VP ++ + S+K I+ G
Sbjct: 222 SGGSNVIVQGFTPEGVMAAMQNERVTDVLLVPTMIQMFVDHPAIGNY--DLSSLKNIIYG 279
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ ++ A + P + AYGMTE S TL P Q G
Sbjct: 280 ASPISEAVLDRAARALPHVRFTQAYGMTELSP---IATLLHPD--------QHVGEGRKK 328
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
H+ G+ E+++ + + VG I+ RG VM+ YW+ +P +
Sbjct: 329 GRHR----GAGRALLGCEVRIVDENDQPLPTGAVGEIVVRGDTVMMGYWE----RPEETA 380
Query: 305 GEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
V W+ TGD G +D+ G +++V R I SGGENVY EVE L QHP ++ V+
Sbjct: 381 RAVVDGWMHTGDGGYMDEDGFIYVVDRVKDMIISGGENVYSVEVENALAQHPSVLQCAVI 440
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
GI N + E V A V R + S EL+ ++ L + G+K PR
Sbjct: 441 GIPNEQWGEQVHAVVVKRSGVEVS---------TGELIEFTKAL--------IAGYKCPR 483
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRR 445
+ P PL+ GK+ + E+RR
Sbjct: 484 SIEITETPLPLSGAGKVLKRELRR 507
>gi|410582941|ref|ZP_11320047.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Thermaerobacter subterraneus DSM 13965]
gi|410505761|gb|EKP95270.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Thermaerobacter subterraneus DSM 13965]
Length = 567
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 180/390 (46%), Gaps = 48/390 (12%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
A V +TSGTT PKGV+ SH A+ + +LA DDV L P+ H L+
Sbjct: 213 ADRDTVQCLYTSGTTSLPKGVLTSHLAVTITALASAVANKSDPDDVLLLVLPIFHCAALN 272
Query: 123 SAMAMLM-VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+ + + VGA VF+ K++ + ++A+E+H VT ++ +P + +L V++ +
Sbjct: 273 ALLLPALLVGATAVFLRKYDVRDVMDALERHRVTHVLLLPMMWQELLQQPGVRE--RDFS 330
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
SV++ L + E + E FP A ++ G TE + F
Sbjct: 331 SVRRCLYAMAPMAPERIAEIQALFPNADVVLGSGQTEFTPPTVFQR-------------- 376
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQF 296
P+ H + G P ++++ D VG I+ RG M YW+
Sbjct: 377 ------PHHQHT-KPASWGLPTVMTDVRIMDDQGRLLPRGQVGEIVYRGPQCMTAYWNNP 429
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
A + + W +GD+G +D+ G VW R+ +K+GGENV EVE LL HP +
Sbjct: 430 EAT-AEAFRHGWFHSGDVGWMDEEGVVWFTDRKKDMVKTGGENVASIEVERALLAHPAVA 488
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
VVG+ + R E V A V L+ Q +E E L HCRE+ L G
Sbjct: 489 ECAVVGLPHDRWGEAVTAFVLLKPGSQATE----------------EELIAHCRER-LAG 531
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
FK P+ V++ FP T TGKI++ +R++
Sbjct: 532 FKVPKR-VVFATEFPRTGTGKIQKHVLRQQ 560
>gi|91780873|ref|YP_556080.1| acyl-CoA synthetase [Burkholderia xenovorans LB400]
gi|91693533|gb|ABE36730.1| Putative AMP-dependent synthetase and ligase [Burkholderia
xenovorans LB400]
Length = 504
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 179/393 (45%), Gaps = 48/393 (12%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS- 122
P+ + +TSGTT PKGV+ S+ + +S IA +G +DD L PL H+G
Sbjct: 147 PDDLYRLMYTSGTTDRPKGVMHSYGNVAWKSFDHIAALGITKDDRLLVVGPLYHVGACDL 206
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+A+L G + F++++ LEA+E+ +T P +++ + L + G S
Sbjct: 207 PGLAVLAQGGMLRIMRDFDAQAVLEAIERERLTGAWLAPVMLSRILALPERYRFDLG--S 264
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ ++ GG P + ++E + F A+ I AYG+TE+ S T M G+
Sbjct: 265 LRWVVGGGERTPEQRIREFGSLFTGARYIDAYGLTESCSGDTLME--------QGRELDK 316
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFL 297
G+ G+ HV+L + SD + G I RG V YW
Sbjct: 317 IGST-------------GRALAHVQLAIMSDDGRMLAPGMQGEICVRGPKVTQGYWKD-P 362
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
K + S + W TGD+G +D+ G ++L R+ I SGGEN+ EVE V+ Q +
Sbjct: 363 EKTARSFVDGWFRTGDVGYMDEEGFLYLTDRKKDMIISGGENIASSEVERVIYQLAEVAE 422
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
V+G + R E V A V LR L+ + LR HC E L GF
Sbjct: 423 AAVIGAPDPRWGEQVTAVVVLRAG----------------ATLTLDALRTHC-EGRLGGF 465
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K PR +L R P +GK+ + +R E++
Sbjct: 466 KTPRQLIL-RDALPRNPSGKVLKRVLRDELLKE 497
>gi|397780243|ref|YP_006544716.1| AMP-dependent synthetase/ligase [Methanoculleus bourgensis MS2]
gi|396938745|emb|CCJ36000.1| AMP-dependent synthetase/ligase [Methanoculleus bourgensis MS2]
Length = 566
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 196/430 (45%), Gaps = 63/430 (14%)
Query: 34 SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQ 93
D + K +++ D L+ SL F + AV I +TSGTTG PKGVV++H +
Sbjct: 177 DDLLAKAALISPDELRERE-ESLDF------DDAVNIQYTSGTTGFPKGVVLTHHNI--- 226
Query: 94 SLAKIAIVGYG----EDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVF-IPKFESKSALE 147
L AI+G G D P H G+ S MA + GA + P F +++ L
Sbjct: 227 -LNNGAIIGDGMKFTHKDRLCIPVPFYHCFGMVLSNMACVTHGAAMILPSPVFNAEAVLR 285
Query: 148 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 207
AV+ T+L VP + +A L + D+++ + G P+E+M+E
Sbjct: 286 AVQDERCTALHGVPTMF--IAELCHPDFSKYRLDTLRTGIMAGSPCPTEVMREVNREMHM 343
Query: 208 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 267
+ ++ YG TETS +T T+ DP + + VG+P PH E
Sbjct: 344 SDIVIVYGQTETSPGVTMTTIDDPL--------------------ELRVSTVGRPFPHTE 383
Query: 268 LKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 321
+K+ + + G I RG VM Y++ A + W TGD+G +D+
Sbjct: 384 IKIVDPNTKRIVPRGETGEICARGYCVMRCYYNNPNATRATIDENGWNHTGDLGVMDEED 443
Query: 322 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 381
V +VGR + GGEN+YP E+E L HP I V+G+ + + E ++A
Sbjct: 444 YVKIVGRLKDMVIRGGENIYPREIEEFLHNHPKIADAYVIGVPDKKYGEELMA------- 496
Query: 382 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 441
W +E+ + L+ +++ CR + + FK PR +V + FP+T +GKI +
Sbjct: 497 WIKTENGAE---------LTEAAVKEFCRGR-IAHFKIPR-YVKFVDEFPMTVSGKIMKF 545
Query: 442 EVRREVMSHL 451
++R + L
Sbjct: 546 KMREMAIEEL 555
>gi|426408982|ref|YP_007029081.1| AMP-dependent synthetase and ligase [Pseudomonas sp. UW4]
gi|426267199|gb|AFY19276.1| AMP-dependent synthetase and ligase [Pseudomonas sp. UW4]
Length = 507
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 180/389 (46%), Gaps = 47/389 (12%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
E I +T GTTG PKGV+ SH L + ++ + D LH APL H+ G++ A
Sbjct: 158 EDLACIMYTGGTTGFPKGVMQSHLNLWSACMPRMVDMPPIRDGRLLHVAPLFHVAGMARA 217
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ M G HV + F++ L+ +E+ +T + VP ++ LA L S+K
Sbjct: 218 LIQFMAGESHVLLSSFDAAQVLQVIERERITETLLVPTMI--LALLAHPDFDRHDLSSLK 275
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
++ G E++++ P +L +YG+TE ++ LP
Sbjct: 276 RLTYGASPSAGEMVEQVLARLPDLELSHSYGLTEACPVVS------------SNLP---C 320
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGR-----ILTRGAHVMLRYWDQFLAK 299
N TP + VG+ V +K+ V R I+ RG ++M YW+ K
Sbjct: 321 NHTPQARKSGLSRSVGRGGLGVNVKIVDPQGQEVARGTVGEIIVRGPNIMQGYWN----K 376
Query: 300 PSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
P + + WL TGD +D+ G +++V R I SGGENVY EVE +L +HP +
Sbjct: 377 PEETAKALRDGWLFTGDGAYMDEQGYLFIVDRLKDMIVSGGENVYSAEVENILARHPAVA 436
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
V+G+ + + E V A V + Q + +E LR++CRE +
Sbjct: 437 LCAVIGVPHEQWGEAVHAVVVRKPGAQ----------------VDAEQLRRYCRE-FIAP 479
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
+K P+ V +R PL++ GK+ + E+R+
Sbjct: 480 YKCPKT-VEFRDELPLSAAGKVLKRELRQ 507
>gi|404420768|ref|ZP_11002502.1| long-chain-fatty-acid--CoA ligase [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403659719|gb|EJZ14347.1| long-chain-fatty-acid--CoA ligase [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 502
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 176/410 (42%), Gaps = 58/410 (14%)
Query: 41 DMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI 100
D+ D+ + PFT AP + FTSGTTG PKG +++H + +
Sbjct: 134 DVPAIDLKSDFLASGKPFTRDVAPTDIADVIFTSGTTGRPKGAMMNHRQTLRAYEEWATL 193
Query: 101 VGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLIT 159
E D YL P H GL + + A + GA V + F+ + +E +E +T L
Sbjct: 194 ADLREGDRYLMINPYFHTFGLKAGLVASFLRGATMVPLAVFDVDNVVELIEHERITMLPG 253
Query: 160 VPAIMADLATLIRVKKTWKGRDSVKKI---LNGGGGLPSELMKEATNSFPKAKLISAYGM 216
P + L + RD + + + G +P EL++ P L++ YG+
Sbjct: 254 PPTLYHSLLAV-------SDRDRLATLRAGVTGAADIPVELVRRIREELPFQTLMTGYGL 306
Query: 217 TETSSSLTFMTLYDPTLETPGQLPQAFGNVT---PNSVHQPQGVCVGKPAPHVELKVCSD 273
TE GNVT P + G P VE+++ D
Sbjct: 307 TEA------------------------GNVTLSRPGDSAEDVATTAGLPCEGVEVRIAED 342
Query: 274 GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRI 333
+L RG +VM Y D A + WL TGD+G + G + +VGR+
Sbjct: 343 TE-----VLVRGYNVMQGYLDDPAATAEAIDADGWLHTGDLGEFTESGRLRIVGRKKDMF 397
Query: 334 KSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSS 393
GG N YP E+E LL+HP I + V+G+A+ R+ ++ A V LR+ +
Sbjct: 398 IVGGFNAYPAEIEGFLLEHPAIAQVAVIGVADERMGQVGKAFVVLRDEPGIAP------- 450
Query: 394 KNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 443
+ +E L RE+ + G+K PR +V + PL +TGK+ ++E+
Sbjct: 451 ------ILAEDLIAWSRER-MAGYKVPR-YVEFLDELPLNATGKVMKNEL 492
>gi|398846412|ref|ZP_10603391.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
gi|398252595|gb|EJN37773.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
Length = 532
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 173/387 (44%), Gaps = 46/387 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
PE + FTSGTTG PKGV+ +H + + ++G G D YL P H G +
Sbjct: 180 PEAVCDLLFTSGTTGKPKGVMSAHGQNLRAFTEYVRVLGLGPGDRYLIVNPFFHAFGYKA 239
Query: 124 A-MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+ L+ GA + F+++ E + + VT L P + L R+ +T S
Sbjct: 240 GWLTCLIAGATILPHAVFDAELVFERIARERVTVLPGAPTLYLSLLAHPRLAET--DLSS 297
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + G +P L++ + + + +AYG+TE TL DP QA
Sbjct: 298 LRVAVTGSASIPPSLIERMRSELGFSVVTTAYGLTECGG---LATLCDP---------QA 345
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKV-----CSDGSSHVGRILTRGAHVMLRYWDQFL 297
V + G+P P E+ + S G I RG H+M Y+
Sbjct: 346 SAEVIAGTS--------GQPLPGTEVSIRGPDNASLAQGQTGEICLRGFHIMQGYFQDPA 397
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
A E WL TGD+G +D GN+ + R GG N YP E+EA LL HP I
Sbjct: 398 ATAEAIDAEGWLHTGDVGCLDPAGNLVITDRLKDMYIVGGFNCYPAEIEAALLGHPAIAQ 457
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVGIA+AR+ E+ ACV LR+ Q E +EL+ S RE+ + +
Sbjct: 458 VAVVGIADARMGEVGCACVVLRQGQQLGE---------QELIGWS-------RER-MANY 500
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVR 444
K PR V + PL + K+ ++++R
Sbjct: 501 KVPRQ-VRFFSALPLNPSNKVAKNDLR 526
>gi|21224520|ref|NP_630299.1| AMP-binding domain-containing protein [Streptomyces coelicolor
A3(2)]
gi|4455741|emb|CAB36604.1| putative long-chain-fatty-acid-CoA ligase [Streptomyces coelicolor
A3(2)]
Length = 541
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 135/433 (31%), Positives = 188/433 (43%), Gaps = 55/433 (12%)
Query: 21 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 80
P+LR V +G S D LTA R + + V I +TSGTTG P
Sbjct: 148 PALRETVYIGDPSWD------ALTAGAAAVEQDRVDALAAELSCDDPVNIQYTSGTTGFP 201
Query: 81 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IP 138
KG +SH ++ VGY E D P H G+ + GAC V P
Sbjct: 202 KGATLSHHNILNNGYWVGRTVGYTEQDRVCLPVPFYHCFGMVMGNLGATSHGACIVIPAP 261
Query: 139 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 198
E + LEAV++ TSL VP + +A L S++ + G P E+M
Sbjct: 262 SSEPAATLEAVQRERCTSLYGVPTMF--IAELNLPDFASYDLTSLRTGIMAGSPCPVEVM 319
Query: 199 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 258
K ++ YGMTETS ++ T D LE H+
Sbjct: 320 KRVVAEMHMEQVSICYGMTETSP-VSLQTRMDDDLE-----------------HRTG--T 359
Query: 259 VGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 312
VG+ PH+E+KV + G + TRG VML YW++ W+ TG
Sbjct: 360 VGRVLPHIEVKVVDPVTGVTLPRGEAGELRTRGYSVMLGYWEEPGKTAEAIDPGRWMHTG 419
Query: 313 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 372
D+ + + G V +VGR I GGEN+YP EVE L HP I + VVG+ + R E V
Sbjct: 420 DLAVMREDGYVEIVGRIKDMIIRGGENIYPREVEEFLYAHPKIADVQVVGVPHERYGEEV 479
Query: 373 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRKPFP 431
+ACV +R++ L+ E LR +C L +K P RL +L FP
Sbjct: 480 LACVVVRDAAD---------------PLTLEELRAYC-AGQLAHYKVPSRLQLL--DSFP 521
Query: 432 LTSTGKIRRDEVR 444
+T +GK+R+ E+R
Sbjct: 522 MTVSGKVRKVELR 534
>gi|339501874|ref|YP_004689294.1| short-chain-fatty-acid--CoA ligase FadK [Roseobacter litoralis Och
149]
gi|338755867|gb|AEI92331.1| short-chain-fatty-acid--CoA ligase FadK [Roseobacter litoralis Och
149]
Length = 565
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 178/401 (44%), Gaps = 47/401 (11%)
Query: 58 FTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH 117
++ +P+ A+ I FTSGTTGSPKG ++H ++ + + + E+D P H
Sbjct: 202 ISNDLSPQDAINIQFTSGTTGSPKGACLTHHNIVNNAHFVTQTMQFTEEDRLCIPVPFYH 261
Query: 118 IGGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK 175
G+ + + IP F++++ LEAV Q T+L VP + + L
Sbjct: 262 CFGMVMGTLGCVSKGATMVIPGEGFDARATLEAVTQEKCTALYGVPTMFVNALELADFDT 321
Query: 176 TWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
S++ + G P E+M++ + AYGMTETS ++F + D LE
Sbjct: 322 F--DLSSLRTGIMAGAPCPIEVMRQVQARMHMQGVTIAYGMTETSP-VSFQSNMDDPLEK 378
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVML 290
+ VG+ PHVE+K+ D + V G +LTRG VM
Sbjct: 379 -------------------RVSSVGRIHPHVEVKIVDDTGNTVKTGEQGELLTRGYSVMQ 419
Query: 291 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 350
YW+ + + W+ TGD+ +D G + GR I GGEN+YP E+E L
Sbjct: 420 GYWEDDAQTAASIDAQGWMHTGDLARLDADGFCTITGRLKDMILRGGENIYPREIEEFLY 479
Query: 351 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 410
HP I+ V GI + +L E V A + R +E++ ++ CR
Sbjct: 480 THPDILQAQVFGIPDNKLGEAVCAWIVARAGSDLAETD----------------VQDFCR 523
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ FK P +V ++ P+T TGK ++ +R ++ L
Sbjct: 524 SA-IAHFKVP-AYVSFKDELPMTVTGKPQKFVMRDRMIKEL 562
>gi|389817941|ref|ZP_10208454.1| AMP-binding domain protein [Planococcus antarcticus DSM 14505]
gi|388464231|gb|EIM06564.1| AMP-binding domain protein [Planococcus antarcticus DSM 14505]
Length = 547
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 181/398 (45%), Gaps = 47/398 (11%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-I 118
HS P+ + I +TSGTTG PKGV+++H ++ + E D P H
Sbjct: 184 HSMQPDDVINIQYTSGTTGFPKGVMLTHLNVVNNGNLVGDTMSLTEKDRLCIPVPFFHCF 243
Query: 119 GGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
G + MA + + +FE K L+ V+ T L VP + +A L + +
Sbjct: 244 GCVLGTMAAVTHSTTMIIAEQFEPKRVLQMVQDEKCTGLHGVPTMF--IAELNHPEFSSF 301
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
+++ + G P E+MK+ + + AYG TE+S +T T D +E
Sbjct: 302 DTSTLRTGIMAGSSCPIEVMKKVITDMGASDITIAYGQTESSPVIT-QTRADDDIEK--- 357
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRY 292
+ VGKP VE+K+ + V G + TRG HVM Y
Sbjct: 358 ----------------RVSTVGKPHTEVEVKIIDPATGEVVEIGIPGELCTRGYHVMKGY 401
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
+ A + E WL TGDI D+ + + GR + GGEN+YP E+E L QH
Sbjct: 402 YKNEEATKTAVDREGWLHTGDIAVQDEEDYIAITGRIKDMVIRGGENIYPREIEEFLYQH 461
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P I + VVG+ + + E ++A V L++ Q LS E L+ +C+ K
Sbjct: 462 PSIQDVQVVGVPDPKYGEELMAWVILKKGEQ----------------LSVEELKAYCKGK 505
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
++ K PR ++ + K +P+T++GKI++ ++R + H
Sbjct: 506 -ISRHKIPR-YIEFTKEYPMTASGKIQKFKLRELSVEH 541
>gi|375007986|ref|YP_004981619.1| AMP-dependent synthetase and ligase [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359286835|gb|AEV18519.1| AMP-dependent synthetase and ligase [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 539
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 198/430 (46%), Gaps = 54/430 (12%)
Query: 27 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 86
VS G+ S + + D+ + L S P + A + AV+ +T GTTG KG +++
Sbjct: 149 VSFGAPPSVSLAEGDVTFDEFLAAGSGAVRPVSIEPAHDVAVL-QYTGGTTGRSKGAMLT 207
Query: 87 HSALIVQSLAKIAIVG----YGEDDVYLHTAPLCHIGGLSSAMAMLMV-GACHVFIPKFE 141
H + L +G++ YL PL H+ ++S M + + GA ++ +P+FE
Sbjct: 208 HRNIFANVLQCAEFFKGTFEFGKER-YLTVIPLFHVFAMTSGMNLAIYQGAENILLPRFE 266
Query: 142 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 201
K LE + T VP + + V++ G S+K +G +P ELM++
Sbjct: 267 LKEVLETIRDKQPTVFPGVPTMYVAITNTPGVEQY--GISSIKTCNSGSAPMPLELMRD- 323
Query: 202 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 261
+ A ++ YG++E S +T +P P + +P V +G
Sbjct: 324 FEAKTGAVILEGYGLSEASP----VTHCNP----------------PFAARKPGTVGIGM 363
Query: 262 PAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 316
P ++ + G+ VG ++ RG VM YW+ + + + + WL TGD+ S
Sbjct: 364 PLTEYKVVDVATGTQELPPGEVGELIIRGPQVMKGYWN-MPEETAAALRDGWLYTGDLAS 422
Query: 317 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 376
ID+ G V +V R+ I +GG N+YP E+E VL +HP + VG+ + E V A +
Sbjct: 423 IDEEGYVTIVDRKKDLIIAGGYNIYPREIEEVLYEHPAVKEAAAVGVPDPYRGETVKAII 482
Query: 377 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 436
L++ Q SE E + HCR KNL +K PR+ V +R P T+ G
Sbjct: 483 VLKDGMQASE----------------EEILAHCR-KNLAAYKVPRI-VEFRAELPKTNVG 524
Query: 437 KIRRDEVRRE 446
KI R +R E
Sbjct: 525 KILRRALREE 534
>gi|379711128|ref|YP_005266333.1| 2-succinylbenzoate--CoA ligase (OSB-CoA synthetase)
(o-succinylbenzoyl-CoA synthetase) [Nocardia
cyriacigeorgica GUH-2]
gi|374848627|emb|CCF65703.1| 2-succinylbenzoate--CoA ligase (OSB-CoA synthetase)
(o-succinylbenzoyl-CoA synthetase) [Nocardia
cyriacigeorgica GUH-2]
Length = 509
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 183/387 (47%), Gaps = 40/387 (10%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
A + +I +TSGTTG PKG +++H L ++ + + DV L APL HIGGL+
Sbjct: 158 AADDVAVIMYTSGTTGRPKGAMLTHGNLFWNNVNALLSFDTSQQDVSLVCAPLFHIGGLN 217
Query: 123 -SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+ + L GA V +P F+ AL + ++ VT++ VPA+ +A + T
Sbjct: 218 VTTLVSLQKGAHLVLMPAFDPARALALIAEYKVTTMFGVPAMFLFMAQVPEFAST--DLS 275
Query: 182 SVKKILNGGGGLPSELM-KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
SV+ + GG +P L+ + P A+ YG+TET+ + L T + ++
Sbjct: 276 SVRSFICGGAPVPEALITRYGERGIPFAQ---GYGLTETAP----LALVLSTDQVATRVG 328
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKP 300
A V P S + V+L + G I RG VM YW A
Sbjct: 329 AAGHQVLPLSEVR-----------LVDLDNNPVPAGERGEICVRGPQVMKGYWRNQAATD 377
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+V E W TGD+G D G V++V R + +GGENVYP EVE VL +HP + + V
Sbjct: 378 AVIDAEGWFHTGDVGQADADGFVYVVDRVKDMVITGGENVYPAEVENVLYRHPAVAEVAV 437
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ + + E V A V L+ + L+ + LR+ R + L G+K P
Sbjct: 438 LGLPHEKWGEAVTAVVALQ----------------PDATLTLDELREFARAE-LAGYKVP 480
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREV 447
L + + P ++GK+ + ++R ++
Sbjct: 481 -LRLEFVDALPRNASGKVLKYQLREQL 506
>gi|269125825|ref|YP_003299195.1| AMP-dependent synthetase and ligase [Thermomonospora curvata DSM
43183]
gi|268310783|gb|ACY97157.1| AMP-dependent synthetase and ligase [Thermomonospora curvata DSM
43183]
Length = 518
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 182/387 (47%), Gaps = 43/387 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
PE ++ +TSGTTG PKG ++HS L+ ++ + DDV+L T PL HI G +
Sbjct: 169 PEDTAVVLYTSGTTGQPKGAELTHSNLLTNTMVADTLFERSPDDVFLVTLPLFHIFGQTC 228
Query: 124 AMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVP----AIMADLATLIRVKKTWK 178
M + A V +P+FE K A++ + + VT VP A++ D + V
Sbjct: 229 VMNVGFYRRATLVLMPRFEPKGAIQLMVKEKVTQFAGVPTMWWALLTDETSPEDVAAI-- 286
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
R++++ ++GG LP E++K + F ++ YG++ETS +F PT
Sbjct: 287 -RENLRVAVSGGAALPMEVLKGIKDKF-GVDILEGYGLSETSPVCSFNRPDRPT------ 338
Query: 239 LPQAFGNVTPNSVHQPQ-GVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFL 297
P S+ P GV + PH E + + G I RG +VM Y+ +
Sbjct: 339 --------KPGSIGLPVWGVEMKLIDPHSEDEWKTIEGEGPGEIAVRGPNVMKGYYKRPE 390
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
A + + + W TGDI D+ G +++ R I GG NVYP E+E VL+ HP +
Sbjct: 391 AT-AWAIKDGWFRTGDIARRDEDGYYYIIDRSKDMIIRGGYNVYPREIEEVLMTHPQVSL 449
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
VVG+ + E + A V + ++ E L +E+ L +
Sbjct: 450 AAVVGVPHDSHGEEIKAYV----------------IRTPGATITEEELIAWSKEQ-LANY 492
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVR 444
K PR+ V +R P+T+TGKI + E+R
Sbjct: 493 KYPRI-VEFRDELPMTATGKILKRELR 518
>gi|379734139|ref|YP_005327644.1| short-chain acyl-CoA synthetase [Blastococcus saxobsidens DD2]
gi|378781945|emb|CCG01599.1| short-chain acyl-CoA synthetase [Blastococcus saxobsidens DD2]
Length = 551
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 177/398 (44%), Gaps = 63/398 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG ++H L+ GY E D P H G M M
Sbjct: 190 IQYTSGTTGFPKGATLTHHNLLNNGFFVGEGCGYTEADRVCIPVPYYHCFG----MGMGN 245
Query: 130 VGACH------VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
+GA + P F+ L AV+ TSL VP + +A L S+
Sbjct: 246 LGATSHGATMIIPAPGFDPALTLRAVQDERCTSLYGVPTMF--IAELGLPNFAEYDLSSL 303
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + G P E+MK ++ YGMTETS T T D LE
Sbjct: 304 RTGIMAGSPCPVEVMKRVVAEMGMTEVTICYGMTETSPVST-QTGADDDLER-------- 354
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 297
+ VG+ PH+E+KV + G TRG VML YW++
Sbjct: 355 -----------RTATVGRVHPHLEVKVVDPATGLTVPRGTPGEFCTRGYSVMLGYWEE-- 401
Query: 298 AKPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
P V+ + W+ TGD+ +D+ G + +VGR + GGENVYP E+E L HP
Sbjct: 402 --PDVTAKSIDSARWMHTGDLAVMDEAGYLNIVGRIKDMVIRGGENVYPREIEEFLYTHP 459
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
I+ V+G+ + R E ++A VRLRE + L+++ L+++C K
Sbjct: 460 DIVDAQVIGVPDERYGEELMAWVRLREGAE---------------PLTADALKEYCSGK- 503
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
L +K PR +V + FP+T TGKIR+ E+R+ + L
Sbjct: 504 LAHYKVPR-YVKVVEEFPMTVTGKIRKVEMRQVSVEEL 540
>gi|115350155|ref|YP_771994.1| AMP-binding domain-containing protein [Burkholderia ambifaria AMMD]
gi|115280143|gb|ABI85660.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria AMMD]
Length = 575
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 204/449 (45%), Gaps = 53/449 (11%)
Query: 14 ELQHTAIPSLRWHVSLGS-SSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVII 70
+L+ +PSLR VS+G + + D++ D L L ++ T A + I
Sbjct: 163 DLRAARVPSLRTVVSMGDVAPAGMFRFADVMARGRDTLDVARLDAIGAT--LAATDPINI 220
Query: 71 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLM 129
FTSGTTGSPKG ++H ++ + + + E D PL H G+ A +A +
Sbjct: 221 QFTSGTTGSPKGATLAHRNVVNNARFIAMAMRFSEQDALCIPVPLYHCFGMVLAVLACVS 280
Query: 130 VGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
GA VF + F+ + L AV T+L VP + +A L + +++ +
Sbjct: 281 TGAAMVFPGEAFDPVATLAAVADERCTALHGVPTMF--IAELDHPEFAKFDLSTLRTGIM 338
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G P E MK + +++ AYGMTETS P +F + T
Sbjct: 339 AGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSFQSSTD 379
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
+ + + + VG+ PH+E+K+ V G + T+G VML YWD AK
Sbjct: 380 DPLEK-RTTTVGRIQPHLEVKIVDPEGRIVPVGATGELCTKGYSVMLGYWDDD-AKTREV 437
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I V G+
Sbjct: 438 LVDGWMHTGDLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGV 497
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+A+ E + A + LR Q SE + +R C + +K PR +
Sbjct: 498 PDAKYGEELCAWIVLRADEQMSEDD----------------VRAFC-NGQIAHYKIPR-Y 539
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ + P+T TGK+++ +R ++ LK
Sbjct: 540 IRFVDELPMTVTGKVQKFVMRERMIEELK 568
>gi|126179036|ref|YP_001047001.1| AMP-dependent synthetase/ligase [Methanoculleus marisnigri JR1]
gi|125861830|gb|ABN57019.1| AMP-dependent synthetase and ligase [Methanoculleus marisnigri JR1]
Length = 566
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 181/395 (45%), Gaps = 48/395 (12%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-S 123
+ AV I +TSGTTG PKGVV++H ++ + + +D P H G+ S
Sbjct: 201 DDAVNIQYTSGTTGFPKGVVLTHHNILNNGFIIGEGMKFTHEDRLCIPVPFYHCFGMVLS 260
Query: 124 AMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
MA + GA V P F ++ L+AV+ T+L VP + +A L D+
Sbjct: 261 NMASVTHGAAMVLPAPVFSPEAVLKAVQDEKCTALHGVPTMF--IAELSHPDFAKYRLDT 318
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + G P+E+M+E ++++ YG TETS +T T DP
Sbjct: 319 LRTGIMAGSPCPTEVMREVNKKMNMSEIVIVYGQTETSPGVTMTTTADPL---------- 368
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQF 296
+ + +GKP PH E+K+ + + G I RG VM Y++
Sbjct: 369 ----------ERRVSTIGKPFPHTEIKIIDPNTQRIVPRGETGEICARGYCVMRCYYNNP 418
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
A + W TGD+G++D+ V +VGR + GGEN+YP E+E L HP +
Sbjct: 419 NATRATIDESHWNHTGDLGTMDEEDYVKIVGRLKDMVIRGGENIYPREIEEYLHNHPKVA 478
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
V+G+ + + E ++A ++ + N L EV ++ CR + +
Sbjct: 479 DAYVIGVPDRKYGEELMAWIK---------------TDNGATLTEDEV-KEFCRGR-IAH 521
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
FK PR +V + FP+T +GKI + ++R + L
Sbjct: 522 FKIPR-YVKFVDDFPMTVSGKIMKFKMREMAIEEL 555
>gi|451821697|ref|YP_007457898.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451787676|gb|AGF58644.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 525
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 191/385 (49%), Gaps = 55/385 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI-GGLSSAMAML 128
I +TSGTTG+PKG++ +HSA++ L+ + Y +D L T PL HI GG SA+ L
Sbjct: 170 ILYTSGTTGNPKGIMFTHSAVLNGPLSFLENFKYTSEDTILVTLPLNHILGGKYSAILGL 229
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKI 186
+ G+ V + KF++ AL+A+E T VP + L T D S++
Sbjct: 230 LAGSKIVLMKKFKTSVALKAIESERCTGFHGVPTMYQYLLT------NCDSYDISSLRVG 283
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
+ G LMK+ ++L + +G TET +T T+YD
Sbjct: 284 MIAGAVSAKTLMKDIMEKLSISELNNTFGQTETLG-VTQTTVYDK--------------- 327
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 300
+ P+ VGKP HVE+K+C+ + + G + + + M+ Y++ +A
Sbjct: 328 -----NDPKINTVGKPVKHVEIKICNPETKEILPKNSEGELYVKSPYSMVGYYNNPIATN 382
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+ + W+ TGD+ ID+ G + + GR I GGEN+ P ++E L++HP I ++
Sbjct: 383 ATIVDD-WIRTGDLAFIDEDGYLSIKGRLKDVIIRGGENISPVDIENHLIKHPEIENAII 441
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VG+ + L E + A +++ ++ SS KE ++++ C + ++ K P
Sbjct: 442 VGVPDEILGEEIFAFIKINKT----------SSLTKE-----DIIKFLCGK--ISKCKIP 484
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRR 445
+ ++ FPLTSTGKIRR+ +++
Sbjct: 485 K-YIESIDSFPLTSTGKIRRNLLKQ 508
>gi|423509848|ref|ZP_17486379.1| O-succinylbenzoate-CoA ligase [Bacillus cereus HuA2-1]
gi|402456080|gb|EJV87858.1| O-succinylbenzoate-CoA ligase [Bacillus cereus HuA2-1]
Length = 496
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 183/393 (46%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGQPKGAVLTQENMFWNALNNTFAIDLTVHDRSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE AL +E++ VT ++ VP I L + + T SV+
Sbjct: 210 FPTLFAGGIIIVPRKFEPTIALSMIEKYKVTVVMGVPTIHQALINCAKFETT--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS------ 318
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+GKP + + + + VG +L RG +VM YW++ A
Sbjct: 319 ---------------IGKPVLFCDYVLIDENKNKVEIGEVGELLIRGPNVMKGYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TEETIQDG--WLYTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSEVCE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ V+G + + E+ +A + K+ +L EV+ HCR L F
Sbjct: 422 VAVIGTQHVKWGEIPIAFI---------------VKKSCSVLTEKEVI-DHCR-LFLAKF 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ V + FP +TGKI++ ++ ++ S
Sbjct: 465 KVPKEIVFLEE-FPKNATGKIQKAQLANQLKSR 496
>gi|453073192|ref|ZP_21976145.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
gi|452756503|gb|EME14917.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
Length = 549
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 193/422 (45%), Gaps = 54/422 (12%)
Query: 35 DFVNKRDMLTADILKGYSLRSL--PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIV 92
D + K+D+ T D+ L P T APE ++ +TSGTTG PKG + SH+ +
Sbjct: 167 DGIVKKDLGTDDLATLIDQHRLGDPITTDAAPEDIAVLTYTSGTTGPPKGAMTSHANMTF 226
Query: 93 QSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP-KFESKSALEAVEQ 151
+ +G D L APL HI GL +A+ ++ + + +F+ + L+A+ +
Sbjct: 227 NAQVYRDWLGLTPKDTVLGVAPLFHITGLIGHIAVSVLARMPLVLAYRFQPEVMLDAIRE 286
Query: 152 HCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI 211
H T TV AI A L+ + ++L GG S EA + A L
Sbjct: 287 HRPT--FTVGAITA-FTALLNTPGCAPEDFTSMRLLYSGGAPISPTAAEAVRAMTGAALH 343
Query: 212 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG-VCVGKPAPHVELKV 270
+ YG+TET+S PT P G TP V G + VG P P+ +++
Sbjct: 344 NIYGLTETTS---------PTHAVP------VGADTP--VDPTSGALSVGVPVPNTVVRI 386
Query: 271 CSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGN 322
+G + +G ++ RG V+ YW+ KP S + W TGD+G +D+ G
Sbjct: 387 EDEGGAVLPIGEIGELVVRGPQVVRGYWN----KPEESASAIRDGWFHTGDVGFMDEAGW 442
Query: 323 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 382
++V R+ I + G V+P EVE VL +HP + VVGIA+ E V A V L
Sbjct: 443 FYVVDRKKDMIIASGYKVWPREVEDVLAEHPAVREAAVVGIADEYRGETVKAFVSLVAGA 502
Query: 383 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 442
++ E L HC+++ + +K PR VL + P T TGKI R E
Sbjct: 503 S----------------VTPEDLIDHCKQR-MAAYKYPRSVVLVEE-LPKTVTGKILRRE 544
Query: 443 VR 444
+R
Sbjct: 545 LR 546
>gi|256824004|ref|YP_003147964.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Kytococcus
sedentarius DSM 20547]
gi|256687397|gb|ACV05199.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Kytococcus
sedentarius DSM 20547]
Length = 516
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 186/395 (47%), Gaps = 45/395 (11%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLA-KIAIVGYGEDDVYLHTAPLCHIGGL 121
AP +I +TSGTTGSPKG ++H L LA + +V +V + PL H+ G+
Sbjct: 152 APGDTAVILYTSGTTGSPKGAELAHENLRTNVLATQETLVHLEPGEVVMGCLPLFHVFGM 211
Query: 122 SSAMAMLMV-GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ A+ +V GA +P+FE+ ALE +E+ V VP + L + ++ +G+
Sbjct: 212 TCALNTSVVAGATLTLLPRFEAGKALEMIERDAVNVFEGVPTMYGGLIAAAKAREA-EGK 270
Query: 181 DSV-----KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
V ++ ++GG LP E ++ +F A ++ YG++ETS F
Sbjct: 271 PPVDTSTLRRCVSGGSSLPMETLRAFEQTF-GADILEGYGLSETSPVACF---------- 319
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVM 289
N + + +G P VE+ + + VG ++ RG ++M
Sbjct: 320 -------------NHPGRTRAGSIGHPIRGVEMAILDPVTGQPVEPGEVGEVVIRGENIM 366
Query: 290 LRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 348
YWD A + ++ G W +GD+G +D G ++V R I GG NVYP EVE V
Sbjct: 367 KGYWDNPEATERAIRDG--WFHSGDLGRVDPDGFFFIVDRVKDLIIRGGTNVYPREVEEV 424
Query: 349 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 408
L +HP ++ VVG A+ L E V A V + + + E+ + L+ E LR H
Sbjct: 425 LYEHPKVLEAAVVGSAHPELGEEVTAYV-VAQPGELDEAALSDAESPAARALADE-LRAH 482
Query: 409 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 443
+++ L +K PR + + P TGKI + E+
Sbjct: 483 AKDQ-LAAYKYPR-HIHFLAELPKGPTGKILKREL 515
>gi|407982255|ref|ZP_11162935.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
gi|407376203|gb|EKF25139.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
Length = 523
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 157/324 (48%), Gaps = 34/324 (10%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
AP+ ++ +TSGTTG+PKGV+++H+ + ++ + + +D V L PL H G
Sbjct: 162 APDDVAVLAYTSGTTGTPKGVMLTHTNYLSKARRILGHWRFRDDTVSLAVMPLFHQAGFG 221
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
AM L VG V + + + L+++E+H VT ++ VPA++ L + S
Sbjct: 222 WAMIGLYVGCPTVVLRDVDPVAVLDSIERHRVTGMLVVPAVIQMLLRTPELDSV--DLSS 279
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ ++ G + +++ +A F + + YGMTE++ S+T + D
Sbjct: 280 LRTLVYGASPISEDVLVKAMQRF-DCEFLGVYGMTESTGSITQLDGAD------------ 326
Query: 243 FGNVTPNSVHQPQGV-----CVGKPAPHVELKVCS-DG----SSHVGRILTRGAHVMLRY 292
H P G G+P P VE++V DG VG + TR A M Y
Sbjct: 327 ---------HDPVGRPGLLRSCGRPYPWVEVRVVGPDGRDVPDGEVGELWTRSAQNMAGY 377
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
W+ A + T + WL TGD G D G ++L R I SG ENVYP EVE VL+ H
Sbjct: 378 WNNPAATAAAITPDGWLRTGDAGRRDADGYLYLYDRVKDMIVSGAENVYPAEVENVLMSH 437
Query: 353 PGIIGIVVVGIANARLTEMVVACV 376
P + + V+G+ + R E V A V
Sbjct: 438 PAVADVAVIGVPDERWGEAVKAIV 461
>gi|348522504|ref|XP_003448764.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Oreochromis niloticus]
Length = 576
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 209/453 (46%), Gaps = 59/453 (13%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYS-LRSLPFTHSWAPEGAVIICF 72
+++ + +P LR + L S ++ D++ A + L+ L S+ + + I F
Sbjct: 168 DIKSSRLPDLRSVIVLDSRQPGMLHFDDVMQAGGSQHMQQLQDLQKKISF--DDPINIQF 225
Query: 73 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-----APLCH-IGGLSSAMA 126
TSGTTG+PKG +SH +I S +GY HT PL H G + +
Sbjct: 226 TSGTTGAPKGATLSHHNIINNSYFIGRRLGYHWRP---HTRVCVPVPLYHCFGSVGGGIC 282
Query: 127 MLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
M + G VF + ++ K+ L A+E T + P + D+ + K SV+
Sbjct: 283 MAVHGISIVFPSRGYDGKANLAAIESERCTFIYGTPTMYVDMVNQPDLAKY--DLSSVEG 340
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P EL+K+ ++ ++ YG TE +S +TF+
Sbjct: 341 GIMAGSPCPQELVKKVASNLGVKEITIGYGTTE-NSPVTFLA------------------ 381
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAK 299
+P + + VG H+E K+ + V G I+ RG VML YWD
Sbjct: 382 -SPLDNVERKTETVGYITDHLEAKIVDPTTGMVVPLGTSGEIMIRGYCVMLEYWDDKAKT 440
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
T + W TGDIG +D G + GR I GGENVYP E+E L HP +
Sbjct: 441 DECITKDRWYKTGDIGRMDAYGYCRIDGRIKDLIIRGGENVYPAEIEQFLHTHPKVKEAQ 500
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VVG+ + R+ E + AC++L + ++C ++E ++ +C+ + ++ FK
Sbjct: 501 VVGVKDERMGEEICACIKLVDG-----ADC-----------TAEEIKAYCKGQ-ISHFKI 543
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
PR ++L+ +PLT TGKI+++++R +V LK
Sbjct: 544 PR-YILFVTSYPLTITGKIQKNKLREQVEKQLK 575
>gi|295835793|ref|ZP_06822726.1| AMP-binding enzyme [Streptomyces sp. SPB74]
gi|295825696|gb|EFG64403.1| AMP-binding enzyme [Streptomyces sp. SPB74]
Length = 544
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 177/383 (46%), Gaps = 51/383 (13%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMV 130
+TSGTTG PKG +SH L+ +GY E D P H G+ +
Sbjct: 195 YTSGTTGFPKGATLSHHNLLNNGFWVGETIGYTEHDRVCLPVPFFHCFGMVMGNLGATSH 254
Query: 131 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GAC V P F++++ LEAVE+ TSL VP + +A L S++ +
Sbjct: 255 GACVVIPAPAFDARATLEAVEKERCTSLYGVPTMF--IAELNLPDFASFDLTSLRTGIMA 312
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P E+MK +++ YGMTETS ++ T D LE
Sbjct: 313 GSPCPVEVMKRVVAEMHMSEVSICYGMTETSP-VSCQTRADDDLE--------------- 356
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQFLAKPSV 302
H+ VG+ PH+E+KV S G + TRG VML YW D +V
Sbjct: 357 --HRTG--TVGRVLPHLEVKVVDPVSGVTVPRGTQGELCTRGYSVMLGYWEDPERTAEAV 412
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
G W+ TGD+ + + G V + GR I GGEN+YP E+E L HP I + VVG
Sbjct: 413 DPGR-WMHTGDLALMREDGYVEIAGRIKDMIIRGGENIYPREIEEFLHTHPKISDVQVVG 471
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-R 421
+ +AR E V+ACV R+ + + + +R CR++ L +K P R
Sbjct: 472 VPDARYGESVLACVIPRDPAEAP---------------TLDEIRAFCRDR-LASYKIPSR 515
Query: 422 LFVLWRKPFPLTSTGKIRRDEVR 444
L VL FP+T +GK+R+ E+R
Sbjct: 516 LEVL--GSFPMTVSGKVRKIELR 536
>gi|399009260|ref|ZP_10711701.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM17]
gi|398113155|gb|EJM03005.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM17]
Length = 564
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 198/448 (44%), Gaps = 51/448 (11%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIIC 71
+LQ +P LR +SL + S F+ + AD+ G S+ +L S P+ AV I
Sbjct: 156 QLQSERLPDLRGVISLDAQPPSGFLPWSQL--ADLGAGVSVEALRERQDSLDPDQAVNIQ 213
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVG 131
+TSGTTG PKG +SH ++ +G G +D + PL H G+ +
Sbjct: 214 YTSGTTGFPKGATLSHYNILNNGYMVGESLGLGHEDRLVIPVPLYHCFGMVMGNLGCVTH 273
Query: 132 ACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
+ P F+ L AV + T L VP + +A L + ++ S++ +
Sbjct: 274 GTTMIYPNDAFDPLQTLGAVAEEKATGLYGVPTMF--IAMLDQPRRAEFDLSSLRTGIMA 331
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P E+M+ + +++ AYGMTETS +L+T P
Sbjct: 332 GATCPIEVMRRVISEMHMSEVQIAYGMTETSPV---------SLQT-----------GPA 371
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVST 304
+ + VG+ P +E K+ + + +G + TRG VML YW+
Sbjct: 372 DDLELRVTTVGRTQPQLESKIIDEAGNIVPRGTIGELCTRGYSVMLGYWNNPQGTAEAID 431
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
W+ TGD+ ++++ G V + GR I GGEN+YP E+E HP + + V+GI
Sbjct: 432 QAGWMHTGDLATMNEQGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIP 491
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
++ E +VA ++ SE E L+ C+ + + FK PR F
Sbjct: 492 CSKYGEEIVAWIKFHPGHSASE----------------EELQAWCKAR-IAHFKTPRYFK 534
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ FP+T TGKI++ +R + L+
Sbjct: 535 FVEE-FPMTVTGKIQKFRMREISIEELR 561
>gi|407685098|ref|YP_006800272.1| AMP-binding protein [Alteromonas macleodii str. 'English Channel
673']
gi|407246709|gb|AFT75895.1| AMP-binding domain protein [Alteromonas macleodii str. 'English
Channel 673']
Length = 579
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 196/445 (44%), Gaps = 47/445 (10%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 74
L + +PSL++ ++G + + L + + + + + + + I FTS
Sbjct: 167 LTLSKLPSLKYVYTIGDKPVEGLQAFSALQIEPTEALKSQLEAVESNLSADDNINIQFTS 226
Query: 75 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGAC 133
GTTG+PKG ++H ++ L + + D PL H G+ + L GAC
Sbjct: 227 GTTGNPKGATLTHRNILNNGLLVSQAMRFTHKDKLCIPVPLYHCFGMVLGNLVCLASGAC 286
Query: 134 HVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
VF + F+ ++ L VE+ T L VP + L K +++ + G
Sbjct: 287 AVFPGESFDPETTLRTVEEEKCTGLHGVPTMFIAELELSNFKSF--DLSTLRTGVMAGST 344
Query: 193 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 252
P ELM++ + F +++ YG TE S + +T D E
Sbjct: 345 CPEELMRKVHSEFHMTEVVIGYGQTE-CSPINHITDIDSPFEK----------------- 386
Query: 253 QPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
Q VG+ PH E+K+ + V G I RG VM YW + + E
Sbjct: 387 --QVKTVGRAMPHTEVKIIDPQGNTVPIGEPGEICARGYCVMKGYWGDEVKTKATIDDEG 444
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
WL +GD+G +D+ G V +VGR I GGEN+YP E+E VL QH + V GI + +
Sbjct: 445 WLHSGDLGEMDEEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHADVSDAAVFGIPDNK 504
Query: 368 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 427
E V ++ +E+ E DQ +R + + K L FK P+ ++
Sbjct: 505 YGEQVCLWIKAKENRHIDE---DQ-------------IRDYLKSK-LAYFKVPK-YISVV 546
Query: 428 KPFPLTSTGKIRRDEVRREVMSHLK 452
K +P+T TGK+++ ++R ++ LK
Sbjct: 547 KEYPMTVTGKLQKFKMREYMIETLK 571
>gi|355666783|gb|AER93651.1| acyl-CoA synthetase family member 2 [Mustela putorius furo]
Length = 616
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 191/390 (48%), Gaps = 44/390 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSL---AKIAI-VGYGEDDVYLHTAPLCH-IGGLSSA 124
I FTSGTTG PKG +SH ++ S +I + + E+ + +PL H +G +
Sbjct: 261 IQFTSGTTGRPKGATLSHYNIVNNSNLIGERIKLHLKTPEETRMVLPSPLYHCLGSVGGT 320
Query: 125 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 181
M LM GA + P F+ K ALEA+ + + L P + D+ + + D
Sbjct: 321 MVSLMYGATLILSSPTFDGKKALEAISKERGSFLYGTPTMFVDILN----QPDFSSYDIS 376
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P EL++ + +L+ AYG TE +S +TF+ + T+E Q +
Sbjct: 377 SIRGGVIAGASAPPELIRAMIDKLNMKELVVAYGTTE-NSPVTFLNFPEDTVE---QKAE 432
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 301
+ G V P++ Q V GK VEL G + RG VML YW +
Sbjct: 433 SVGRVMPHTEAQIVNVKTGK---LVELNT-------PGELWIRGYCVMLGYWGEPQKTEE 482
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ + W TGDI +D G +VGR I GGEN+YP E+E HP + + VV
Sbjct: 483 IIGQDKWYRTGDIAMMDKQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVV 542
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + R+ E + AC+RL++ + +E E ++ C+ K ++ FK PR
Sbjct: 543 GVKDYRMGEEICACIRLKKGEKTTE----------------EEIKAFCKGK-ISHFKIPR 585
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+V++ FPLT +GKI++ ++R ++ HL
Sbjct: 586 -YVVFVTNFPLTVSGKIQKFKLREQMEQHL 614
>gi|324506941|gb|ADY42950.1| Acyl-CoA synthetase family member 2 [Ascaris suum]
Length = 634
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 195/440 (44%), Gaps = 66/440 (15%)
Query: 32 SSSDFVNKRDMLTADILKGYS-----------------LRSLPFTHSWAPEGAVIICFTS 74
SS +F N R + D K Y ++ P+ V I +TS
Sbjct: 175 SSHNFPNFRHFIIIDDQKAYRGAWKYSEVIKMGTEEDRIKLADIERQVQPDDPVNIQYTS 234
Query: 75 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA-PLCHIGG--LSSAMAMLMVG 131
GTTG PKG ++H ++ + GY E + PL H G + S A + +
Sbjct: 235 GTTGVPKGATLTHHNVVNNAYFIGRRAGYSEKRTIICVPNPLYHCFGCVMGSLNACIHLQ 294
Query: 132 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
C P FE +AL+A+ + T++ P + D+ R + S+ G
Sbjct: 295 TCVFPAPSFEPLAALQAIHEERCTTVYGTPTMFIDMLNHPRYSEF--DYSSIFSGFVAGA 352
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P L + L YG TETS +++M++ D + P + ++ G++
Sbjct: 353 PCPIALCRRLVQELGMRDLQVCYGTTETSP-VSYMSVRD---DPPEERIKSVGHIMD--- 405
Query: 252 HQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 306
H+E + +DG+ G +L RG VM YWD + T +
Sbjct: 406 -------------HLESAIVGNDGTVLPRGERGEVLVRGYSVMRCYWDSEDMTKTEITPD 452
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
W TGDIG + + G V +VGR+ I GGEN+YP EVE L +HP I + +VG+ +
Sbjct: 453 RWYHTGDIGVMHENGTVSIVGRKKDMIVRGGENIYPTEVEQYLFRHPMIEDVQIVGVPDE 512
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
R E+V A +RL E +KN ++ + +R C+ + + FK PR ++L+
Sbjct: 513 RYGEVVCAWIRLNE-----------EAKN----ITEQDIRDFCKGR-IAHFKIPR-YILF 555
Query: 427 R--KPFPLTSTGKIRRDEVR 444
+ K FPLT +GK+++ E+R
Sbjct: 556 KGEKDFPLTVSGKVKKYEMR 575
>gi|295706972|ref|YP_003600047.1| o-succinylbenzoate--CoA ligase [Bacillus megaterium DSM 319]
gi|294804631|gb|ADF41697.1| O-succinylbenzoate-CoA ligase [Bacillus megaterium DSM 319]
Length = 487
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 198/424 (46%), Gaps = 60/424 (14%)
Query: 35 DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 94
+F + LT LK F W E I +TSGTTG PKGV+ ++ S
Sbjct: 115 EFQSSITQLTLPALKSSPEAETDFQKMWNLEETFTIMYTSGTTGHPKGVLQTYGNHWWSS 174
Query: 95 LAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCV 154
+ +G E D +L PL HI GLS M + G + +FE+++ EA+E V
Sbjct: 175 VGSALNLGLNEKDCWLIAVPLFHISGLSILMRSVFYGMKIILEERFEARAVNEAIENKEV 234
Query: 155 TSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAY 214
T + V ++++++ + +K + + +L GGG P +++ N + + Y
Sbjct: 235 TVISVVTSMLSNMLDELGGRKY---PHTFRCMLLGGGPAPLTILEACVNK--EIPVYQTY 289
Query: 215 GMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG 274
GMTETSS F+TL +P + G+ GKP +K+ +
Sbjct: 290 GMTETSSQ--FVTL------SPEDSLRKLGSA-------------GKPLFPCAMKIVDEK 328
Query: 275 ---SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGR 328
+S G I+ +G +V Y L KP + + W TGDIG +D+ G ++++ R
Sbjct: 329 GNETSEAGEIIVKGPNVTKGY----LNKPEATEKALQQGWFYTGDIGKVDEEGFLYVLDR 384
Query: 329 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 388
R+ I SGGENVYP E+E VLL+HP + V G+A+ + ++ AC+ + E
Sbjct: 385 RSDLIISGGENVYPAEIENVLLKHPAVKEAGVTGVADEKWGQVPAACIVVNED------- 437
Query: 389 CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVM 448
+S E L H ++ L +K P+ FV + P T++ KI +RR++
Sbjct: 438 -----------VSDEELSLHI-QQFLAKYKLPKYFVRVEE-LPRTASNKI----IRRKLS 480
Query: 449 SHLK 452
S ++
Sbjct: 481 SFIQ 484
>gi|226182689|dbj|BAH30793.1| fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
Length = 549
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 193/422 (45%), Gaps = 54/422 (12%)
Query: 35 DFVNKRDMLTADILKGYSLRSL--PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIV 92
D + K+D+ T D+ L P T APE ++ +TSGTTG PKG + SH+ +
Sbjct: 167 DGIVKKDLGTDDLATLIDQHRLGDPITTDAAPEDIAVLTYTSGTTGPPKGAMTSHANMTF 226
Query: 93 QSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP-KFESKSALEAVEQ 151
+ +G D L APL HI GL +A+ ++ + + +F+ + L+A+ +
Sbjct: 227 NAQVYRDWLGLTPKDTVLGVAPLFHITGLIGHIAVSVLARMPLVLAYRFQPEVMLDAIRE 286
Query: 152 HCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI 211
H T TV AI A L+ + ++L GG S EA + A L
Sbjct: 287 HRPT--FTVGAITA-FTALLNTPGCAPEDFTSMRLLYSGGAPISPTAAEAVRAMTGAALH 343
Query: 212 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG-VCVGKPAPHVELKV 270
+ YG+TET+S PT P G TP V G + VG P P+ +++
Sbjct: 344 NIYGLTETTS---------PTHAVP------VGADTP--VDPTSGALSVGVPVPNTVVRI 386
Query: 271 CSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGN 322
+G + +G ++ RG V+ YW+ KP S + W TGD+G +D+ G
Sbjct: 387 EDEGGAVLPIGEIGELVVRGPQVVRGYWN----KPEESASAIRDGWFHTGDVGFMDEAGW 442
Query: 323 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 382
++V R+ I + G V+P EVE VL +HP + VVGIA+ E V A V L
Sbjct: 443 FYVVDRKKDMIIASGYKVWPREVEDVLAEHPAVREAAVVGIADEYRGETVKAFVSLVAGA 502
Query: 383 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 442
++ E L HC+++ + +K PR VL + P T TGKI R E
Sbjct: 503 S----------------VTPEDLIDHCKQR-MAAYKYPRSVVLVEE-LPKTVTGKILRRE 544
Query: 443 VR 444
+R
Sbjct: 545 LR 546
>gi|71994694|ref|NP_001023938.1| Protein ACS-1, isoform b [Caenorhabditis elegans]
gi|351063225|emb|CCD71311.1| Protein ACS-1, isoform b [Caenorhabditis elegans]
Length = 597
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 47/405 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA-PLCHIGG-- 120
P+ ++ I +TSGTTG PKG ++H ++ + GY E + PL H G
Sbjct: 226 PDDSLNIQYTSGTTGQPKGATLTHHNVLNNAFFVGLRAGYSEKKTIICIPNPLYHCFGCV 285
Query: 121 LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ A+ + C P F++ +AL+A+ + T+L P + D+ +
Sbjct: 286 MGVLAALTHLQTCVFPAPSFDALAALQAIHEEKCTALYGTPTMFIDMIN--HPEYANYNY 343
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
DS++ G P L + + YG TETS ++FM+ D + P Q
Sbjct: 344 DSIRSGFIAGAPCPITLCRRLVQDMHMTDMQVCYGTTETSP-VSFMSTRD---DPPEQRI 399
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKP 300
++ G++ + A V+ + C G ++ RG VM YW+
Sbjct: 400 KSVGHIMDHL-----------EAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTK 448
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
T + W TGDI + D G + +VGR I GGEN+YP EVE L +H + + +
Sbjct: 449 KEITQDRWYHTGDIAVMHDNGTISIVGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHI 508
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VG+ + R E+V A VRL ES E + E ++ C+ K + FK P
Sbjct: 509 VGVPDERFGEVVCAWVRLHES--------------AEGKTTEEDIKAWCKGK-IAHFKIP 553
Query: 421 RLFVLWRK--PFPLTSTGKIRRDEVR---------REVMSHLKSL 454
R ++L++K FPLT TGK+++ E+R ++V+SH L
Sbjct: 554 R-YILFKKEYEFPLTVTGKVKKFEIREMSKIELGLQQVVSHFSEL 597
>gi|84501811|ref|ZP_00999969.1| acyl-CoA synthase [Oceanicola batsensis HTCC2597]
gi|84389806|gb|EAQ02440.1| acyl-CoA synthase [Oceanicola batsensis HTCC2597]
Length = 539
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 174/385 (45%), Gaps = 39/385 (10%)
Query: 59 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI 118
T + PE V+IC+TSGTTG PKG + SH A+I QS+ ++G D L P H+
Sbjct: 172 TEAVKPEDPVLICYTSGTTGRPKGAMHSH-AVIRQSMNVAQVMGMKTGDAALAHMPFYHV 230
Query: 119 GGL-SSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 177
GL + ++ G + +P + ++ AL+ +E V +P D +
Sbjct: 231 AGLFMGVLPAVIHGMSLIVMPDWSAERALDLIETEKVAHFGGIPTHFLDCFD----AQAK 286
Query: 178 KGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
+ RD +V+ GG + +++EA F ++++YGMTET+ S TF DP
Sbjct: 287 RPRDLSTVRAAWIGGAAISPGVVREAREVFSTPHILTSYGMTETTISTTFAHYDDPPEVA 346
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQ 295
+ G+ V G +G ++ +G + RG V + Y++
Sbjct: 347 EENTGKLIGDYEARIVDPGNGATLG--------------ANEIGELQVRGHIVTMGYYNN 392
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
A T + W TGD+G D G + + GR GG N YP E+EA L HP I
Sbjct: 393 PEATREAITSDGWFRTGDLGVFDARGYLKITGRIKEMFIVGGSNTYPAEIEAHLETHPAI 452
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+VVG+ + RL ++ A +R E D+ S + HCR +
Sbjct: 453 RQAMVVGVPHERLGQVGFAFIRRVE----GADPIDEKS-----------VIDHCR-GVIA 496
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRR 440
+K PR +V + FP+T +GKI+R
Sbjct: 497 DYKVPR-YVRFATDFPMTESGKIQR 520
>gi|158316695|ref|YP_001509203.1| AMP-dependent synthetase and ligase [Frankia sp. EAN1pec]
gi|158112100|gb|ABW14297.1| AMP-dependent synthetase and ligase [Frankia sp. EAN1pec]
Length = 499
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 179/395 (45%), Gaps = 42/395 (10%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
PE ++ FTSGTTG PK V+ H L ++ + G ED+V + + P HI G+S+
Sbjct: 142 PEDIAVLLFTSGTTGEPKAAVLRHRNLTEYVISTVEFAGSAEDEVAIVSVPPYHIAGVSA 201
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
+ + G V + FE ++ ++ V VT + VP ++ + +I + +G S+
Sbjct: 202 SCSSTYSGRRVVQLESFEPRAWVDLVRAESVTHAMVVPTMLGRILDVI--EADGQGLPSL 259
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ I GGG +P +++ A + P ++AYG+TETSS++ + D P+
Sbjct: 260 RSISYGGGPMPLPVIERAVTALPHVGFVNAYGLTETSSTIAVLGPDDHQAAISSDDPEVR 319
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 298
+ VGKP P +E+ + G V G I RG V ++L
Sbjct: 320 ARLG----------SVGKPLPSLEVTIRDPGGQEVPTGEHGEIWVRGGQVS----GEYLG 365
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ + W T D G +D GG +++ GR + I GGEN+ P E+EAVL+ HP +
Sbjct: 366 IGRIEN-DGWFPTRDEGHLDSGGYLYVHGRLDDVIVRGGENMSPGEIEAVLITHPAVEEA 424
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVGI + E VVA V S + +E LR H R + L +
Sbjct: 425 AVVGIPHRDWGEQVVAAVVT--SGEVTEDE----------------LRGHVRAQ-LRSSR 465
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
P + +R P GK+ R +R E+ S
Sbjct: 466 TPE-HIQFRSELPFNENGKLLRRVLRTELEQAFSS 499
>gi|359765766|ref|ZP_09269585.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
gi|359316402|dbj|GAB22418.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
Length = 523
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 187/403 (46%), Gaps = 58/403 (14%)
Query: 62 WAPEGAV---IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI 118
W P G + ++ +TSGTTG+PKG +++H++L+ + A+ A +G DD + P H+
Sbjct: 166 WEPVGILTPAVLLYTSGTTGAPKGAMLTHASLLASARAQAAHLGQRPDDAVIAHMPFNHV 225
Query: 119 GGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 177
GGL+ + +A + VGA + +P F + +L A+ H T + VP + A L+ + T+
Sbjct: 226 GGLTCTVLAAMTVGARLILVPGFHPQQSLAAIVAHGATMCVGVPTMFA----LMMAEPTF 281
Query: 178 KGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
D V+ + GG + L + ++FP A+L + YG++ETS
Sbjct: 282 ADADLSRVRTCVIGGSNVDPALGRRVIDAFPGARLANLYGLSETSG-------------- 327
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVML 290
G + A G+ V +G P +V + V G + G V
Sbjct: 328 -GCIISAEGDDLDTLVET-----LGVPIGDFRARVVDADDNEVDAGVDGELQIAGDCVAA 381
Query: 291 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 350
YW + A + WL TGD+ + G++ L GRR GG NVYP EVE VL
Sbjct: 382 GYWQRPDATTDAFGTDGWLRTGDMATARPDGHIVLRGRRKEMYVRGGYNVYPAEVENVLT 441
Query: 351 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 410
HP ++ V+G+ + E+ VA V L ++ +E LR C
Sbjct: 442 SHPHVVLAAVIGVPDETYGEVGVAFVVLDDAVDVTE------------------LRALCA 483
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
E+ L +K P V+ PLT +GKI++ ++++ SHL S
Sbjct: 484 EQ-LARYKQPGEIVVVDS-LPLTPSGKIKKADIKK---SHLSS 521
>gi|323527839|ref|YP_004229992.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1001]
gi|323384841|gb|ADX56932.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1001]
Length = 576
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 211/453 (46%), Gaps = 61/453 (13%)
Query: 14 ELQHTAIPSLRWHVSL------GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGA 67
+L+ +P+LR+ + + G S V ++ T D+ + + + H A
Sbjct: 164 QLRAARLPALRYVIRMCDTDTPGMLSFSDVIEQGRATLDVARLDEIGNTLSCHE-----A 218
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MA 126
+ I FTSGTTG+PKG ++HS ++ + + E D PL H G+ A +A
Sbjct: 219 INIQFTSGTTGNPKGATLTHSNVVNNARYIAMAMNLNEHDALCIPVPLYHCFGMVLAVLA 278
Query: 127 MLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ VGA VF + F+ + L AV + T+L VP + +A L ++
Sbjct: 279 CVSVGANMVFPGEAFDPAATLAAVAEEQCTALHGVPTMF--IAELDHPNFASYDLSRLRT 336
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E MK+ + +++ AYGMTETS P +F +
Sbjct: 337 GIMAGSPCPIETMKKVVSRMHLSEITIAYGMTETS-------------------PVSFQS 377
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAK 299
T + + + + VG+ PH+E+K+ + V G + TRG VM YW D+ +
Sbjct: 378 STTDPLDK-RTTTVGRIQPHLEVKIIDPLGNIVPVGETGELCTRGYSVMQGYWGDEEKTR 436
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
S+ G W+ TGD+ +ID G +VGR + GGEN+YP E+E L +HP I +
Sbjct: 437 ESIVDG--WMHTGDLATIDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSVQ 494
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V G+ +A+ E V A V LR Q ++E ++Q C + + +K
Sbjct: 495 VFGVPDAKYGEEVCAWVVLRSGEQ----------------ATAEEIQQFC-QGQIAHYKV 537
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
PR ++ + P+T TGK+++ +R +++ L+
Sbjct: 538 PR-YIRFVDELPMTVTGKVQKFVMRERMINELR 569
>gi|71994703|ref|NP_001023939.1| Protein ACS-1, isoform c [Caenorhabditis elegans]
gi|351063226|emb|CCD71312.1| Protein ACS-1, isoform c [Caenorhabditis elegans]
Length = 578
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 184/405 (45%), Gaps = 47/405 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA-PLCHIGG-- 120
P+ ++ I +TSGTTG PKG ++H ++ + GY E + PL H G
Sbjct: 207 PDDSLNIQYTSGTTGQPKGATLTHHNVLNNAFFVGLRAGYSEKKTIICIPNPLYHCFGCV 266
Query: 121 LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ A+ + C P F++ +AL+A+ + T+L P + D+ + +
Sbjct: 267 MGVLAALTHLQTCVFPAPSFDALAALQAIHEEKCTALYGTPTMFIDM--INHPEYANYNY 324
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
DS++ G P L + + YG TETS ++FM+ D + P Q
Sbjct: 325 DSIRSGFIAGAPCPITLCRRLVQDMHMTDMQVCYGTTETSP-VSFMSTRD---DPPEQRI 380
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKP 300
++ G++ + A V+ + C G ++ RG VM YW+
Sbjct: 381 KSVGHIMDHL-----------EAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTK 429
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
T + W TGDI + D G + +VGR I GGEN+YP EVE L +H + + +
Sbjct: 430 KEITQDRWYHTGDIAVMHDNGTISIVGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHI 489
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VG+ + R E+V A VRL ES E + E ++ C+ K + FK P
Sbjct: 490 VGVPDERFGEVVCAWVRLHES--------------AEGKTTEEDIKAWCKGK-IAHFKIP 534
Query: 421 RLFVLWRK--PFPLTSTGKIRRDEVR---------REVMSHLKSL 454
R ++L++K FPLT TGK+++ E+R ++V+SH L
Sbjct: 535 R-YILFKKEYEFPLTVTGKVKKFEIREMSKIELGLQQVVSHFSEL 578
>gi|381210101|ref|ZP_09917172.1| AMP-binding domain protein [Lentibacillus sp. Grbi]
Length = 544
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 180/389 (46%), Gaps = 47/389 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMV 130
+TSGTTG PKGV+++H ++ + +D P H G + +A +
Sbjct: 196 YTSGTTGFPKGVMLTHHNIVNNGNQIADCMKLTHEDRLCIPVPFFHCFGCVLGILAAVSK 255
Query: 131 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
G V + +F+ + ++AV + T L VP + +A L + ++ + G
Sbjct: 256 GTTMVLLEQFDPEKVMKAVSEEKCTGLHGVPTMF--IAELNHPNFSTYDFSHLRTGIMAG 313
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P E+MK+ N ++ AYG TE+S DP
Sbjct: 314 STCPIEVMKDVMNKMGATEITIAYGQTESSPVFLQTRTDDPV------------------ 355
Query: 251 VHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVST 304
+ + VGK P+VE+K+ G+ G + TRG HVM Y++ A +
Sbjct: 356 --EVKATTVGKVHPNVEVKIIVPGTEQEQVQGEPGELCTRGYHVMKGYYNNQEATDAAID 413
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
+ WL TGD+ +D+ G + GR I GGEN+YP EVE L QHP ++ + VVGI
Sbjct: 414 RDGWLHTGDLAVMDENGYFQITGRMKDMIIRGGENIYPREVEKFLYQHPDVLDVQVVGIP 473
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ + E ++A + L++ WS + + E +R C E N++ K P+ ++
Sbjct: 474 DKKYGEELMAWIILKD---WSNA-------------TEEDIRSFC-EGNISRHKIPK-YI 515
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
+ +P+T++GKI++ ++R + ++ ++
Sbjct: 516 KFTAEYPMTASGKIQKFKLREQAVAEVRQ 544
>gi|333977920|ref|YP_004515865.1| long-chain-fatty-acid--CoA ligase [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821401|gb|AEG14064.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum kuznetsovii DSM
6115]
Length = 554
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 185/399 (46%), Gaps = 47/399 (11%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IG 119
S P+ + + +TSGTTG PKGV+++H L++ + + + +G D P H G
Sbjct: 186 SLDPDDVINMQYTSGTTGFPKGVMLTHRNLVMNAKSVAECLNFGPRDRLCIPVPFFHCFG 245
Query: 120 GLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
+ + ++ GA V + F LE VE+ T+L VP + + L ++K
Sbjct: 246 CVLGTLTCVVSGATMVPLESFNPVRVLETVEKERCTALHGVPTMF--ITELEVLEKQPFD 303
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
S++ + G P E+MK + +++ YG TE S +T MT D LE
Sbjct: 304 TSSLRTGIMAGAPCPIEVMKAVVDRMGMKEIVITYGQTEASPGIT-MTRTDDPLEI---- 358
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYW 293
+ VG+ P VE+KV + + G I RG +VM Y+
Sbjct: 359 ---------------RVSTVGRALPGVEVKVVDPATGEEVPRGYQGEICARGYNVMKGYY 403
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
A S E WL TGD+G +D+ G V + GR I GGEN+YP E+E L HP
Sbjct: 404 KMPEATASTIDREGWLHTGDLGIMDEQGYVRITGRIKDMIIRGGENIYPREIEEFLHTHP 463
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
I + VVG+ +++ E V+A ++L+E ++E +R+ C K
Sbjct: 464 KIKDVQVVGVPSSKYGEEVMAFIQLKEGCT----------------ATAEEIREFCNGK- 506
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ +K P+ ++ + +P T+ GK+++ ++R + + L
Sbjct: 507 IARYKIPQ-YIQFVSSYPTTANGKVQKFKLREQAIRELN 544
>gi|26990171|ref|NP_745596.1| acyl-CoA synthetase [Pseudomonas putida KT2440]
gi|24985110|gb|AAN69060.1|AE016539_1 long-chain-fatty-acid-CoA ligase, putative [Pseudomonas putida
KT2440]
Length = 562
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 177/391 (45%), Gaps = 47/391 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG +SHS ++ +G E D + PL H G+ A M
Sbjct: 206 IQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHDRLVVPVPLYHCFGMVMANLGCM 265
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ P F+ + L AV Q T+L VP + +A L ++ S++ +
Sbjct: 266 THGSALIYPSDAFDPLATLRAVAQEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T LE VT
Sbjct: 324 MAGATCPIEVMRRVIGEMHMAEVQIAYGMTETSP-VSLQTGAADDLER---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E KV ++G++ +G + TRG VML YW+ A
Sbjct: 374 ----------SVGRTQPRLESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAES 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
E W+ TGD+ +D+ G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDAEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ ++ E +VA VRL SE LR+ R + + FK PR
Sbjct: 484 VPCSKYGEEIVAWVRLHPGHAVSEVE----------------LREWARAR-IAHFKVPRY 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
F + FP+T TGK+++ +R + LK+
Sbjct: 527 FRFVDE-FPMTVTGKVQKFRMREISVEELKA 556
>gi|456388153|gb|EMF53643.1| long-chain-fatty-acid-CoA ligase [Streptomyces bottropensis ATCC
25435]
Length = 530
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 192/441 (43%), Gaps = 62/441 (14%)
Query: 13 LELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 72
+E T P LR V G S D A I +G +PF + + + I +
Sbjct: 137 VEEVRTRCPRLRETVYFGDPSWD---------ALIARG---TPVPF-EDLSCDDPINIQY 183
Query: 73 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVG 131
TSGTTG PKG +SH ++ + Y E D P H G+ +A G
Sbjct: 184 TSGTTGFPKGATLSHHNILNNGYFVGESLAYTERDRICVPVPFYHCFGMVMGNLAATSHG 243
Query: 132 ACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
AC V P F++++ LEAV++ TSL VP + +A L S++ + G
Sbjct: 244 ACVVIPAPSFDARATLEAVQRERCTSLYGVPTMF--IAELNLPDFGAYDLSSLRTGIMAG 301
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P E+MK ++ YGMTETS T T D LE
Sbjct: 302 SPCPVEVMKRVVTEMHMREVSICYGMTETSPVST-QTRRDDDLEH--------------- 345
Query: 251 VHQPQGVCVGKPAPHVELKVC------SDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
+ VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 346 ----RTATVGRVLPHIEVKVVDPVTGVTRPRGTAGELCTRGYSVMLGYWEEPEKTAEAVD 401
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
W+ TGD+ ++ + G V +VGR I GGEN+YP E+E L HP I + VVG+
Sbjct: 402 PGRWMHTGDLATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYGHPKIADVQVVGVP 461
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR-LF 423
+ R E V+ACV E + L+ E LR +C + L +K P L
Sbjct: 462 HERYGEEVLACVIPHEGAE---------------PLTLEELRAYC-DGQLAHYKIPSALR 505
Query: 424 VLWRKPFPLTSTGKIRRDEVR 444
VL FP+T +GK+R+ E+R
Sbjct: 506 VL--DSFPMTVSGKVRKIELR 524
>gi|375140968|ref|YP_005001617.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359821589|gb|AEV74402.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 496
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 180/391 (46%), Gaps = 39/391 (9%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
PE ++ FTSGTT PK V ++H+ L + G DD L P HI G+S+
Sbjct: 138 PEDVGVVLFTSGTTSRPKAVELTHNNLTSYITGTVEFDGAEPDDAALICVPPYHIAGVSA 197
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
A++ L G V++P+F+ + V VTS VP ++ + + + + ++
Sbjct: 198 ALSNLYAGRKMVYLPQFDPSEWVRLVRDEGVTSATVVPTMLDRIVSALDSEPV--ALPTL 255
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + GG + L+++A P ++AYG+TETSS++ + TP +A
Sbjct: 256 RNLAYGGSKVALPLVRKALGLLPDVGFVNAYGLTETSSTIAVL--------TPDDHREAL 307
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLA 298
+ T V + G VG+P P VEL++ D G G + RG V RY +
Sbjct: 308 AS-TDVRVTRRLG-SVGQPVPGVELQIRDDSGQVVGPGETGELFVRGEQVSGRYAEIG-- 363
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
SV + W T D+ +D+ G +++ GR + I GGEN+ P E+E VL++HP +
Sbjct: 364 --SVLDADGWFPTKDVAWLDEEGYLFIGGRSDDTIIRGGENIAPAEIEDVLVEHPHVHDC 421
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG + QW + + LR+H R + L G +
Sbjct: 422 AVVG----------------PDDPQWGQIIVAVVVPAAGADPDPDELREHVRSQ-LRGSR 464
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMS 449
P V++R P +TGK+ R E+ +E+ +
Sbjct: 465 TPDR-VVFRDELPTNATGKVLRRELVQELTA 494
>gi|397694374|ref|YP_006532255.1| acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
gi|298682215|gb|ADI95281.1| putative acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
gi|397331104|gb|AFO47463.1| acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
Length = 557
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 174/382 (45%), Gaps = 47/382 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG +SHS ++ +G E D + PL H G+ A M
Sbjct: 206 IQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHDRLVVPVPLYHCFGMVMANLGCM 265
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ P F+ + L AV Q T+L VP + +A L ++ S++ +
Sbjct: 266 THGSALIYPSDAFDPLATLRAVVQEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T LE VT
Sbjct: 324 MAGATCPIEVMRRVIGEMHMAEVQIAYGMTETSP-VSLQTGAADDLER---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E KV ++G++ +G + TRG VML YW+ A
Sbjct: 374 ----------SVGRTQPRLESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAES 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
E W+ TGD+ +D+ G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDAEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ ++ E +VA VRL SE E LR+ R + + FK PR
Sbjct: 484 VPCSKYGEEIVAWVRLHPGHAVSE----------------EALREWARAR-IAHFKVPRY 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVR 444
F + FP+T TGK+++ +R
Sbjct: 527 F-RFVDAFPMTVTGKVQKFRMR 547
>gi|262201331|ref|YP_003272539.1| AMP-dependent synthetase and ligase [Gordonia bronchialis DSM
43247]
gi|262084678|gb|ACY20646.1| AMP-dependent synthetase and ligase [Gordonia bronchialis DSM
43247]
Length = 542
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 206/467 (44%), Gaps = 60/467 (12%)
Query: 1 MLVTDESSDSWYLELQHTA---IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLP 57
++ + DS Y ++ A P LR V L SSS + D LTAD +
Sbjct: 121 VIAAERFKDSAYAQMLDEARPKCPELR-EVVLFSSS-----QWDELTADPTDAELAQVAD 174
Query: 58 FTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH 117
+ +P+ A+ I +TSGTTG PKG ++H + ++ Y + D P H
Sbjct: 175 VAATLSPDDAINIQYTSGTTGFPKGATLTHRNIGNNGYLVGELLNYTDADRICIPVPFYH 234
Query: 118 -IGGLSSAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVK 174
G + +A GA V P F+ ++ L AV ++ TSL VP + +A+LA L
Sbjct: 235 CFGMVMGNLAATSHGAAMVIPAPAFDPEATLRAVAEYRCTSLYGVPTMFIAELALLD--G 292
Query: 175 KTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 234
S++ + G P +M++ + ++ YGMTETS T + DP
Sbjct: 293 GASHDLSSLRTGIMAGSPCPEHVMRQVIDRMNMGQVSICYGMTETSPVSTQTRVDDPL-- 350
Query: 235 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHV 288
+ + VG+ PH+E+KV + G TRG V
Sbjct: 351 ------------------ELRVTTVGRVGPHLEIKVVDPVTGETLPRGETGEFCTRGYSV 392
Query: 289 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 348
M YW+Q G+ W+ TGD+ + G V + GR + GGEN+YP E+E
Sbjct: 393 MKGYWNQPEKTAEAIDGDGWMHTGDLAVMAPDGYVAITGRIKDMVIRGGENIYPREIEEF 452
Query: 349 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 408
L HP I+ V+G+ + + E ++A VRLR+ L++E +R+
Sbjct: 453 LYTHPDILDAQVIGVPDEKYGEELMAWVRLRKP---------------ATDLTAEDVREF 497
Query: 409 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR---EVMSHLK 452
K + K PR +V K FP+T TGK+R+ +R E++ HL+
Sbjct: 498 ATGK-IAHHKIPR-YVHVVKEFPMTVTGKVRKVAMREEAAEILEHLR 542
>gi|410456819|ref|ZP_11310673.1| AMP-dependent synthetase and ligase [Bacillus bataviensis LMG
21833]
gi|409927371|gb|EKN64508.1| AMP-dependent synthetase and ligase [Bacillus bataviensis LMG
21833]
Length = 493
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 184/385 (47%), Gaps = 56/385 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS-AMAML 128
+ +T GTTG PKGVV+SH +++ ++ I G EDDV ++ P+ H GGL++ ++ +L
Sbjct: 151 MIYTGGTTGKPKGVVLSHQSILWNAINTILSWGLAEDDVTVNYMPMFHTGGLNALSIPLL 210
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
M+G V F + A+E + + T+++ VP + L +K+ +K L+
Sbjct: 211 MMGGTVVIGEPFLGEKAVETLHRFNCTTILLVPTMYHSLVQTDEFQKS--DFPCMKIFLS 268
Query: 189 GGGGLPSELMKEATNSFPKAKLI--SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
G P ++ + +F K L YG+TE P F +
Sbjct: 269 GAAPCPMQIYE----AFQKKGLAFKEGYGLTEAG-------------------PNNF-YI 304
Query: 247 TPNSVHQPQGVCVGKPAPHVELK-VCSDGS----SHVGRILTRGAHVMLRYWD-QFLAKP 300
+P +G VGKP +K V +DGS + VG +L +G H YW+ + K
Sbjct: 305 SPEDAQMNRG-SVGKPMLFNTIKLVKTDGSETEPNEVGELLIKGKHSFSFYWNHEQETKE 363
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+V G W+ TGD+ D+ G ++VGR+ I +GGENVYP E+E L HP I + V
Sbjct: 364 TVKDG--WIHTGDLAKRDEQGFYYIVGRKKEMIITGGENVYPLEIEQWLAAHPAIDEVAV 421
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ + + E+V A + + ++ + E L +C K L +K P
Sbjct: 422 LGLPDEKWGEVVAAFITFKHTYS----------------IQDEELITYCESK-LGRYKIP 464
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRR 445
+LF+ + P T GKI + +++
Sbjct: 465 KLFIRLEE-LPKTHVGKIDKKKLKE 488
>gi|192288893|ref|YP_001989498.1| AMP-binding domain-containing protein [Rhodopseudomonas palustris
TIE-1]
gi|192282642|gb|ACE99022.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
TIE-1]
Length = 564
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 197/444 (44%), Gaps = 47/444 (10%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 74
LQ +P LR + +G + D + A + + F + AV I FTS
Sbjct: 153 LQSAKLPKLRTVIQIGGPKAPGTIAFDEVAAMGGARHRDQIAAFASELQFDDAVNIQFTS 212
Query: 75 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGAC 133
GTTGSPKGV ++H ++ + E D PL H G+ +A + GA
Sbjct: 213 GTTGSPKGVTLTHHNILNNGYFVGRAMKLTEADRICIPVPLYHCFGMVMGNLASVTSGAA 272
Query: 134 HVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
V+ + F+ L+ + T+L VP + +A L + S++ + G
Sbjct: 273 MVYPGEGFDPLVTLQTASREKCTALYGVPTMF--IAELDHPEFASFDLSSLRTGIMAGAP 330
Query: 193 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 252
P E+M+ ++ ++ AYGMTETS ++F + D E
Sbjct: 331 CPVEVMRRVNDAMNMREVTIAYGMTETSP-VSFQSAVDDPEER----------------- 372
Query: 253 QPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
+ VG+ PHVE+KV DG G + TRG VML YWD+ V
Sbjct: 373 --RVSTVGRIHPHVEVKVVDLDGKIVPRGQRGELCTRGYSVMLGYWDEAEKTADVLDAAG 430
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +HP I + + G+A+ R
Sbjct: 431 WMHTGDLATIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADDR 490
Query: 368 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 427
E + A VR R L+++ +R C + + K PR ++ +
Sbjct: 491 YGEELCAWVRPRPGET----------------LTADDVRAFC-QGQIAHNKIPR-YIEFV 532
Query: 428 KPFPLTSTGKIRRDEVRREVMSHL 451
FP+T TGKI++ +R +V S L
Sbjct: 533 DEFPMTVTGKIQKFIMREKVESKL 556
>gi|386001613|ref|YP_005919912.1| AMP-dependent acyl-CoA synthetase and ligase [Methanosaeta
harundinacea 6Ac]
gi|357209669|gb|AET64289.1| AMP-dependent acyl-CoA synthetase and ligase [Methanosaeta
harundinacea 6Ac]
Length = 569
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 181/390 (46%), Gaps = 48/390 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAML 128
I +TSGTTG PKGVV++H ++ + + + D P H G+ S MA +
Sbjct: 209 IQYTSGTTGFPKGVVLTHHNILNNGYFIGECMKFTDQDRLCIPVPFYHCFGMVLSNMACM 268
Query: 129 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA V + F+ S L AVE+ T+L VP + +A L S++ +
Sbjct: 269 THGAAMVLPAEYFDPASTLAAVERERCTALHGVPTMF--VAELEHPDFDKYDLSSLRTGI 326
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P+E MK+ ++ +++ YG TE S +T + T
Sbjct: 327 MAGSPCPTEYMKKVSSLMNMREVVITYGQTEASPGITMSS-------------------T 367
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+S+ + + VGKP PH E+K+ + + G I RG +M Y++ A
Sbjct: 368 SDSLDR-RVSTVGKPMPHTEVKITDPKTGKIMHRGETGEICARGYAIMRCYYNNPGATEK 426
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
E WL TGD+G +DD + GR + GGEN+YP E+E L HP I + V+
Sbjct: 427 AIDKEGWLHTGDLGILDDEDYCKITGRLKDMVIRGGENIYPREIEEFLYTHPDISDVQVI 486
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ +AR E ++A ++L+E L++E + CR + + FK PR
Sbjct: 487 GVPDARYGEELMAWIKLKEGRT----------------LTAEEVLAFCRGR-IAHFKIPR 529
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
++ + FP+T TGKI++ ++R E + L
Sbjct: 530 -YIKFVDGFPMTVTGKIQKYKMREESIKEL 558
>gi|111221388|ref|YP_712182.1| O-succinylbenzoate--CoA ligase [Frankia alni ACN14a]
gi|111148920|emb|CAJ60599.1| putative O-succinylbenzoate--CoA ligase (OSB-CoA synthetase)
(O-succinylbenzoyl-CoA synthetase) [Frankia alni ACN14a]
Length = 499
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 180/384 (46%), Gaps = 41/384 (10%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
++ FTSGTTG PK V+ HS L ++ + G ED+ + + P HI G+S+ ++
Sbjct: 147 VLLFTSGTTGEPKAAVLRHSNLTEYIISTVEYAGSAEDEAAIVSVPPYHIAGISAVLSST 206
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
G V + F+ + + V + +T + VP ++ + + V+ G S++ +
Sbjct: 207 YSGRRVVQLEAFDPTAWVTIVREESITHAMVVPTMLGRILDI--VEADGLGLPSLRSLSY 264
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
GGG +P +++ A P ++AYG+TETSS++ + P AF + P
Sbjct: 265 GGGPMPLPVIERAVGLLPNVGFVNAYGLTETSSTIAVLG--------PDDHQAAFASDDP 316
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
+ + VGKP P +E+ + V G I RG V ++L + +
Sbjct: 317 AV--RARLASVGKPLPTLEVSIRDAVGIEVPVGERGEIYVRGGQVS----GEYLGRGTTL 370
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W T D G +D+ G +++ GR + I GGEN+ P E+EAVLL+HPG++ VVGI
Sbjct: 371 DSDGWFPTRDEGHLDEAGYLFVHGRLDDVIVRGGENLSPGEIEAVLLEHPGVLEAAVVGI 430
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
N E VVA V ++ E L+ H R + L + P
Sbjct: 431 PNKEWGEQVVAAVVTSGG------------------VTEEDLKAHVRTR-LRSSRTPD-H 470
Query: 424 VLWRKPFPLTSTGKIRRDEVRREV 447
+ +R+ P +GK+ R +R E+
Sbjct: 471 IQFREELPFNESGKLLRRVLRTEL 494
>gi|443490033|ref|YP_007368180.1| fatty-acid-CoA ligase [Mycobacterium liflandii 128FXT]
gi|442582530|gb|AGC61673.1| fatty-acid-CoA ligase [Mycobacterium liflandii 128FXT]
Length = 495
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 28/311 (9%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG ++H+ L + ++ G DDV L PL H G ++ + A
Sbjct: 155 VILYTSGTTGKPKGAELTHANLRRNVEVIVQMLQVGPDDVILGALPLFHAFGQTAGLNAA 214
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ GAC IP+F + AL+ +E+ VT VP + A A L ++ G S++ +
Sbjct: 215 VAAGACLTLIPRFSPEKALQIIERDRVTVFEGVPTMFA--AMLHSTERPDTG--SLRLCV 270
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
+GG +P E+M+ +F ++ YG++ETS + +F
Sbjct: 271 SGGAAMPVEVMRGFEQAF-GTMVLEGYGLSETSPTASFNH-------------------- 309
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
P+ +P +G P V++K+ + +G I RG +VM YW++ A + E
Sbjct: 310 PDRERKPG--SIGTPIAGVQMKLLEVDTHGIGEIAIRGHNVMKGYWNRPDATAAAIDAEG 367
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
W TGD+ ID+ G ++V R I GG NVYP E+E VL +HP + VV + +
Sbjct: 368 WFRTGDLARIDEDGYYFIVDRSKDMIIRGGYNVYPREIEEVLYEHPEVREAAVVAVPDDM 427
Query: 368 LTEMVVACVRL 378
L E V A + L
Sbjct: 428 LGEEVGAAIAL 438
>gi|226364601|ref|YP_002782383.1| acid--CoA ligase [Rhodococcus opacus B4]
gi|226243090|dbj|BAH53438.1| putative acid--CoA ligase [Rhodococcus opacus B4]
Length = 512
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 179/384 (46%), Gaps = 40/384 (10%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-M 127
++ ++SGTTG+PKGV++SH ++ ++ ++ + L APL HIGG+ A+
Sbjct: 163 VLMYSSGTTGAPKGVMLSHGNMLWNAMNQLLAQDMTSKERTLSVAPLFHIGGIGGAVTPT 222
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
L+ G V + KF++ + L+ +E+ +T+ VP ++ +L R T S++ I
Sbjct: 223 LLCGGTVVLLRKFDAGAVLDTIEKERITTFFAVPTMIQELWHHPRFADT--DLSSLRAIC 280
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G LP L+ + AYG+TET+ S+T ++ D + + F T
Sbjct: 281 VAGAPLPEALISPWQER--GVAIAQAYGLTETAPSVTMLSGDDVRAKVGSAGKRTF--FT 336
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
V +P G S + +G I+ +G +VML Y +Q A +
Sbjct: 337 DVDVVRPDG--------------SSAEPNEIGEIVAQGPNVMLGYLNQPEATDRAIV-DG 381
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
WL TGD G DD G +++ R SGGENVYP EVEA LL+ GI V+G+ + +
Sbjct: 382 WLHTGDAGYFDDEGFLFICDRYKDMYISGGENVYPAEVEAALLKLNGIREAAVIGVPHEK 441
Query: 368 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 427
W E+ L + +R REK L GFK P F+
Sbjct: 442 ----------------WGETGMAFVVAADGTDLDEDTVRARLREK-LAGFKIP-TFIQIA 483
Query: 428 KPFPLTSTGKIRRDEVRREVMSHL 451
+ P T+TGKIR+ ++R +L
Sbjct: 484 EGLPRTATGKIRKPDLRSRAREYL 507
>gi|453075742|ref|ZP_21978525.1| AMP-dependent synthetase and ligase [Rhodococcus triatomae BKS
15-14]
gi|452762622|gb|EME20917.1| AMP-dependent synthetase and ligase [Rhodococcus triatomae BKS
15-14]
Length = 496
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 188/400 (47%), Gaps = 57/400 (14%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
+ ++ FTSGTT +PKGV++ H L+ + GED L + P HI G+ +
Sbjct: 140 DSTAVVLFTSGTTSAPKGVLLRHHNLLSYLFNTVEFASAGEDQAALVSTPPYHIAGMGAV 199
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG----R 180
++ L G V++P F + L+ V VTS + VP ++A RV + KG
Sbjct: 200 LSNLYSGRRMVYLPDFSPQGWLDLVRDEGVTSAMVVPTMLA------RVVEHLKGAPART 253
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTF-------MTLYDPTL 233
++ + GG +P +++ A +FP ++AYG+TETSS++ + L DP L
Sbjct: 254 PALASLAYGGARMPQPVLERALAAFPSTGFVNAYGLTETSSTIAVLGPDDHRLALTDPAL 313
Query: 234 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYW 293
G+L + G V P Q + + V DG++ G + RG+ V
Sbjct: 314 R--GRL-SSVGRVVPGMEAQIRA--------DDDTTVLPDGAT--GLLWVRGSQVS---- 356
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
+++ + +V + W T D ++D G +++ GR + I GGEN+ P E+E VL+ H
Sbjct: 357 GEYMGRGTVLDDDGWFPTRDRARLED-GYLYIGGRADDTIIRGGENIAPAEIEDVLVHHD 415
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
G+ + VVG+ + +W E C + L E +R CR +
Sbjct: 416 GVREVAVVGLPDD----------------EWGERICAAIVPEPGVALEPEQIRAWCRSR- 458
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
L G + P V++ P T TGK+ VRR+++S +++
Sbjct: 459 LRGSRTPD-DVIFVDDLPRTPTGKL----VRRDLVSQVEA 493
>gi|386759656|ref|YP_006232872.1| hypothetical protein MY9_3083 [Bacillus sp. JS]
gi|384932938|gb|AFI29616.1| hypothetical protein MY9_3083 [Bacillus sp. JS]
Length = 486
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 189/387 (48%), Gaps = 59/387 (15%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
+ + +TSGTTG PKGV + +++ +G E D +L PL HI GLS+
Sbjct: 144 DATATLMYTSGTTGKPKGVQQTFGNHYFSAVSSALNLGITEQDRWLIALPLFHISGLSAL 203
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
++ G V +F L+++ +H VT + V ++A L +++T + +S++
Sbjct: 204 FKSVIYGMTVVLHQRFSVSDVLDSINRHEVTMVSAVQTMLASL-----LQETSRCPESIR 258
Query: 185 KILNGGGGLPSELMKEATNS-FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
IL GGG P L++E FP + +YGMTET S +
Sbjct: 259 CILLGGGPAPLPLLEECREKGFP---VFQSYGMTETCSQIV------------------- 296
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS----HVGRILTRGAHVMLRYWDQFLA- 298
++P + G GKP E+K+ DG + G I+ +G +VM Y+++ A
Sbjct: 297 -TLSPEFSMEKLG-SAGKPLFSCEIKIERDGQACEPFEHGEIMVKGPNVMKSYFNRERAN 354
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ S G WL TGD+G +D+ G ++++ RR+ I SGGEN+YP EVE+VLL HP +
Sbjct: 355 EASFQNG--WLKTGDLGYLDNEGFLYVLDRRSDLIISGGENIYPAEVESVLLSHPAVAEA 412
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V G + + ++ A + L + +S+E LR +C+E+ L +K
Sbjct: 413 GVSGAEDRKWGKVPHAYLVLHKP------------------VSAEELRAYCKER-LAKYK 453
Query: 419 AP-RLFVLWRKPFPLTSTGKIRRDEVR 444
P + FVL R P ++ K+ R+ ++
Sbjct: 454 IPAKFFVLDR--LPRNASNKLLRNRLK 478
>gi|239820536|ref|YP_002947721.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
gi|239805389|gb|ACS22455.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
Length = 545
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 175/384 (45%), Gaps = 52/384 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG-LSSAMAML 128
I +TSGTTG+PKG ++ H+ L+ + G E V + PL H G + S++ +
Sbjct: 193 IQYTSGTTGNPKGALLHHAGLVTSARLTCNRAGI-EASVVISPMPLFHTAGAVLSSLGCV 251
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
G+ +V FE ++ + A+ VP + +A L K+ +++ ++
Sbjct: 252 TTGSTYVLPLLFEPETLMRAIALERCDVFYGVPTM--QIAMLDHPKRDQYDLSTLRVAIS 309
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
GG +P EL+ F L++ YG TE S +++ V P
Sbjct: 310 GGAPVPPELLHRIETGF-HCDLLTLYGQTECSPTISM--------------------VGP 348
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSV 302
N + + VG+P P VE+++ S G I RG ML Y++
Sbjct: 349 NDNQEDKATTVGQPLPQVEIRIADPASGKTQSVGAEGEIEVRGPQCMLGYFEMPEETAQT 408
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ WL TGD+G++D G + + GR I GGEN+YP EVEA L++H + VV G
Sbjct: 409 MRPDGWLRTGDLGTLDRRGYLRVTGRLKDMIIRGGENIYPAEVEARLMEHATVAMAVVFG 468
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I +AR E+V A V++R L ++E LR HC L+ +L
Sbjct: 469 IPDARWGEVVGAAVQIRAGMP---------------LPAAEALRAHC----LSMLAPQKL 509
Query: 423 FVLWR--KPFPLTSTGKIRRDEVR 444
+W FPLT++GK+++ +R
Sbjct: 510 PTVWFSCDAFPLTASGKVQKFRLR 533
>gi|183981621|ref|YP_001849912.1| fatty-acid-CoA ligase [Mycobacterium marinum M]
gi|183174947|gb|ACC40057.1| fatty-acid-CoA ligase [Mycobacterium marinum M]
Length = 495
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 28/311 (9%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG ++H+ L + ++ G DDV L PL H G ++ + A
Sbjct: 155 VILYTSGTTGKPKGAELTHANLRRNVEVIVQMLQVGPDDVILGALPLFHAFGQTAGLNAA 214
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ GAC IP+F + AL+ +E+ VT VP + A A L ++ G S++ +
Sbjct: 215 VAAGACLTLIPRFSPEKALQIIERDRVTVFEGVPTMFA--AMLHSTERPDTG--SLRLCV 270
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
+GG +P E+M+ +F ++ YG++ETS + +F
Sbjct: 271 SGGAAMPVEVMRGFEQAF-GTMVLEGYGLSETSPTASFNH-------------------- 309
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
P+ +P +G P V++K+ + +G I RG +VM YW++ A + E
Sbjct: 310 PDRERKPG--SIGTPIAGVQMKLLEVDTHGIGEIAIRGHNVMKGYWNRPDATAAAIDAEG 367
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
W TGD+ ID+ G ++V R I GG NVYP E+E VL +HP + VV + +
Sbjct: 368 WFRTGDLARIDEDGYYFIVDRSKDMIIRGGYNVYPREIEEVLYEHPEVREAAVVAVPDDM 427
Query: 368 LTEMVVACVRL 378
L E V A + L
Sbjct: 428 LGEEVGAAIAL 438
>gi|302522672|ref|ZP_07275014.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. SPB78]
gi|302431567|gb|EFL03383.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. SPB78]
Length = 538
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 175/382 (45%), Gaps = 49/382 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMV 130
+TSGTTG PKG +SH L+ +GY D P H G+ +
Sbjct: 189 YTSGTTGFPKGATLSHHNLLNNGFWVGETIGYTPSDRVCLPVPFFHCFGMVMGNLGATSH 248
Query: 131 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GAC V P FE+++ LEAVE+ T+L VP + +A L S++ +
Sbjct: 249 GACIVIPAPSFEARATLEAVEKERCTALYGVPTMF--IAELNLPDFGSFDLTSLRTGIMA 306
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 307 GSPCPVEVMKRVVAEMHMAEVSICYGMTETSP-VSCQTRADDDLE--------------- 350
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 303
H+ VG+ PH+E+KV S G + TRG VML YW+ V
Sbjct: 351 --HRTG--TVGRVLPHLEVKVVDPVSGVTVPRGTQGELCTRGYSVMLGYWEDPERTAEVV 406
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
W+ TGD+ + + G V + GR I GGEN+YP E+E L HP I + VVG+
Sbjct: 407 DPGRWMHTGDLALMREDGYVEIAGRIKDMIIRGGENIYPREIEEFLYTHPKISDVQVVGV 466
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RL 422
+AR E V+ACV R+ D + ++ +R CR++ L +K P R+
Sbjct: 467 PDARYGESVLACVIPRDP-------ADAPTLDE--------IRAFCRDR-LASYKIPSRV 510
Query: 423 FVLWRKPFPLTSTGKIRRDEVR 444
VL FP+T +GK+R+ E+R
Sbjct: 511 EVL--GTFPMTVSGKVRKIELR 530
>gi|384082654|ref|ZP_09993829.1| malonyl-CoA synthase [gamma proteobacterium HIMB30]
Length = 504
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 182/386 (47%), Gaps = 61/386 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-L 128
I +TSGTTG PKG +I+HS L+ + GY DDV LH+ PL H+ GL A+ + L
Sbjct: 165 IIYTSGTTGKPKGAMITHSNLVANAEMLTEAWGYSSDDVLLHSLPLFHVHGLFVALNLAL 224
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
M G + +PKF+ + LEA+ V ++ VP L R + G ++ ++
Sbjct: 225 MNGGPVIMLPKFDPERVLEAMPDATV--MMGVPTYYTRLLADPRFDRDVSGH--MRLFIS 280
Query: 189 GGGGLPSELMKEATNSF---PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
G + L+ E ++ F +++ YGMTET S +
Sbjct: 281 GS----APLLVETSDEFFSRTGQRILERYGMTETGMSCS--------------------- 315
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLAKP 300
P + + G VG P P VE+++ + DG+ +G + +G HV YW + K
Sbjct: 316 -NPLNGDRRAG-SVGPPLPGVEVRIIAEDGNPLPHGEIGSLEVKGDHVFKGYW-KLPEKT 372
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+ W TGD+ ++ D G V +VGR I SGG N+YP+E+E VL G+I V
Sbjct: 373 AAEFKGDWFITGDMATLSDDGYVSIVGRGKDLIISGGLNIYPKEIEDVLNDQEGVIESAV 432
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VG+ + E +VA + ES D ++ L+ CREK L GFK P
Sbjct: 433 VGVPHPDFGEGIVAIL-------VGESQLD-----------TDALQAVCREK-LAGFKIP 473
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRRE 446
R ++ P + GK++++ +R +
Sbjct: 474 RRWIRL-DALPRNTMGKVQKNLLRDD 498
>gi|254385476|ref|ZP_05000803.1| acyl-CoA synthetase [Streptomyces sp. Mg1]
gi|194344348|gb|EDX25314.1| acyl-CoA synthetase [Streptomyces sp. Mg1]
Length = 546
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 177/395 (44%), Gaps = 48/395 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E D P H G+ +A
Sbjct: 192 IQYTSGTTGFPKGATLSHHNILNNGFFVGELCHYTELDRVCIPVPFYHCFGMVMGNLACT 251
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA V P FE + L AVE TSL VP + ++ L ++ +
Sbjct: 252 SHGAAMVIPAPSFEPAATLAAVEAESCTSLYGVPTMF--ISALADPGFDSYDLSGLRTGI 309
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MKE + ++ YGMTETS T T D ++E
Sbjct: 310 MAGSPCPVEVMKEVIDRMGMTEVSICYGMTETSPVST-QTRADDSVER------------ 356
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ VG+ PH+E+KV + G + TRG VML YW +
Sbjct: 357 -------RVSTVGRVGPHLEVKVVDPATGRTVPRGEPGELCTRGYSVMLGYWGEPERTAE 409
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ +D+ G + + GR + GGEN+YP E+E L HP ++ + V+
Sbjct: 410 AVDAARWMHTGDLAVMDEDGYLSITGRIKDMVIRGGENLYPREIEEFLHTHPDVLDVQVI 469
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E ++A VR+RE + L++E +R +C + L FK PR
Sbjct: 470 GVPDPKYGEELMAWVRMREGAE---------------PLTAETVRAYCAGR-LAHFKIPR 513
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPS 456
+V + FP+T TGKIR+ E+ RE + L P+
Sbjct: 514 -YVHVVEEFPMTVTGKIRKIEM-RETAARLLDPPA 546
>gi|341891057|gb|EGT46992.1| hypothetical protein CAEBREN_25008 [Caenorhabditis brenneri]
Length = 633
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 182/405 (44%), Gaps = 47/405 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA-PLCHIGG-- 120
P+ ++ I +TSGTTG PKG ++H ++ + GY E + PL H G
Sbjct: 262 PDDSLNIQYTSGTTGQPKGATLTHHNVLNNAFFVGLRAGYSEKKTIICIPNPLYHCFGCV 321
Query: 121 LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ A+ + C P F++ +AL+A+ + T+L P + D+
Sbjct: 322 MGVLAALTHLQTCVFPAPSFDALAALQAIHEEKCTALYGTPTMFIDMINHPEYGNY--NY 379
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
DS++ G P L + + YG TETS ++FM+ D + P Q
Sbjct: 380 DSIRSGFIAGAPCPITLCRRLVQDMHMTDMQVCYGTTETSP-VSFMSTRD---DPPEQRI 435
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKP 300
++ G++ + A V+ + C G ++ RG VM YW+
Sbjct: 436 KSVGHIMDHL-----------EAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTK 484
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
T + W TGDI + D G + +VGR I GGEN+YP EVE L +H + + +
Sbjct: 485 KEITQDRWYHTGDIAVMHDNGTISIVGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHI 544
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VG+ + R E+V A VRL ES E + E ++ C+ K + FK P
Sbjct: 545 VGVPDERFGEVVCAWVRLHES--------------AEGKTTEEDIKAWCKGK-IAHFKIP 589
Query: 421 RLFVLWRKP--FPLTSTGKIRRDEVR---------REVMSHLKSL 454
R ++L++K FPLT TGK+++ E+R ++V+SH L
Sbjct: 590 R-YILFKKEHQFPLTVTGKVKKFEIREMSKIELGLQQVVSHFSEL 633
>gi|159463650|ref|XP_001690055.1| predicted protein [Chlamydomonas reinhardtii]
gi|158284043|gb|EDP09793.1| predicted protein [Chlamydomonas reinhardtii]
Length = 444
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 109/186 (58%), Gaps = 19/186 (10%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM 125
G ++ FTSGTT +PKGV +SH+A QS+ K+A+VGY D YLHTAPL HIGGLSSA
Sbjct: 109 GTALLVFTSGTTAAPKGVQLSHAAFHAQSMVKLALVGYCPADTYLHTAPLFHIGGLSSAF 168
Query: 126 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV-----------K 174
A LM G VF+P+F++++AL A+ H V+ I VP ++ DLA +
Sbjct: 169 AALMAGCVQVFMPRFDAEAALAAILHHRVSVFIAVPTMLQDLAAAAAATAAAVTGAAGPE 228
Query: 175 KTWKGRDS--------VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM 226
+ G + V++IL G GG +L + +FP A L+SAYGMTE SS+TF
Sbjct: 229 RLPAGAEDVAPGPLGCVRRILVGAGGTAPKLQDAVSRTFPAAHLLSAYGMTEACSSMTFR 288
Query: 227 TLYDPT 232
L P
Sbjct: 289 HLRGPA 294
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 68/147 (46%), Gaps = 42/147 (28%)
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+KP++ T + WL TGD+G + G +WL+GR IKSGGENV+ +VEAVL HP +
Sbjct: 326 SKPAL-TADGWLRTGDLGYLAADGGLWLLGRAKDMIKSGGENVFAPQVEAVLCAHPAVAA 384
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
VVG+ + RL E + L GF
Sbjct: 385 AAVVGLPHERLGE-----------------------------------------QGLAGF 403
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+ PRL V +P PL +GK+ + +R
Sbjct: 404 RLPRLAVAQWQPLPLNGSGKVAKPVIR 430
>gi|375095672|ref|ZP_09741937.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
gi|374656405|gb|EHR51238.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
Length = 536
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 164/325 (50%), Gaps = 40/325 (12%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD-VYLHTAPLCHIGGLSSAMAM 127
I +TSGTTG PKG V++H L++ + + +A +G DD V+L APL HI GLS +
Sbjct: 181 FIMYTSGTTGRPKGAVLTHFNLLLHAFSNMATLGVTNDDRVWLAAAPLFHIAGLSGMLPN 240
Query: 128 LMVGACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
L++G V +P +F+ + L+ +E+ V+S VPA + + + + + S++K
Sbjct: 241 LLLGGRTVLLPSGQFDPAATLDVMERERVSSCFLVPAQWQAICAVPDIAE--RDLSSLRK 298
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
I G + L++ ++FP+A++ +A+G TE S T + D + G+
Sbjct: 299 ISWGAAPASTTLLRTMIDTFPQAEVTTAFGQTECSPVTTVLRGEDSI--------RKIGS 350
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKP 300
V G P +VE+++ D VG I+ RG VM YW+ KP
Sbjct: 351 V-------------GTPMLNVEVRLVDDDMNDVAQGEVGEIVYRGPMVMKEYWN----KP 393
Query: 301 SVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
V T E W +GD+ D+ G ++V R+ I SGGEN+Y EVE VL HP I
Sbjct: 394 -VETAEAFRGGWFHSGDLVRQDEDGYYYVVDRKKDMIISGGENIYCAEVENVLAAHPKIG 452
Query: 357 GIVVVGIANARLTEMVVACVRLRES 381
+ ++G+ + R E +A + R S
Sbjct: 453 EVALIGMPDERWGETPLAVIAPRRS 477
>gi|345010053|ref|YP_004812407.1| AMP-dependent synthetase/ligase [Streptomyces violaceusniger Tu
4113]
gi|344036402|gb|AEM82127.1| AMP-dependent synthetase and ligase [Streptomyces violaceusniger Tu
4113]
Length = 574
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 176/402 (43%), Gaps = 53/402 (13%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
+ AV I +TSGTTG PKG +SH ++ V Y +D P H G+
Sbjct: 192 DDAVNIQYTSGTTGFPKGATLSHHNILNNGFFVGETVRYTAEDRICVPVPFYHCFGMVMG 251
Query: 125 -MAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+A GAC V IP F+ + L AVE+ TSL VP + +A L
Sbjct: 252 NLAATSHGAC-VVIPAGTFDPVATLAAVERERCTSLYGVPTMF--IAELALPDFATFDLS 308
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P E+M+ A++ YGMTETS
Sbjct: 309 SLRTGIMAGSPCPVEVMRRVVAEMHMAEVSICYGMTETSP-------------------- 348
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 295
P+ + VG+ PH+E+K+ + G + TRG VML YW +
Sbjct: 349 VSAQTRPDDDLVRRTSTVGRVLPHIEVKIVDPVTGATVPRGTRGELCTRGYSVMLGYWQE 408
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
W+ TGD+ +D G V +VGR I GGENVYP E+E L HP +
Sbjct: 409 PERTAEAIDSARWMHTGDLAVMDGEGYVQIVGRIKDMIVRGGENVYPREIEEFLHTHPKV 468
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ VVG+ + + E V+ACV LRE + L+ + L + CR + L
Sbjct: 469 ADVQVVGVPDEKYGEEVLACVILREGAK---------------TLTRDELARFCRGR-LA 512
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR----REVMSHLKS 453
+K PR L FP+T +GK+R+ E+R RE++ +S
Sbjct: 513 HYKVPRYLRLM-DGFPMTVSGKVRKVELREAAARELLPETRS 553
>gi|453364097|dbj|GAC80184.1| putative fatty-acid--CoA ligase [Gordonia malaquae NBRC 108250]
Length = 548
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 184/398 (46%), Gaps = 52/398 (13%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSS 123
+ A+ I +TSGTTGSPKGV +SH+ + +V Y E D P H G +
Sbjct: 188 DDAINIQYTSGTTGSPKGVTLSHTNIGNNGFLVGELVNYTEADRICLPVPFYHCFGMVMG 247
Query: 124 AMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD 181
+A + G+ V P F+ +AL AVE++ TSL VP + +A+LA L T D
Sbjct: 248 NLAAISHGSAMVIPGPAFDPATALAAVEKYGCTSLYGVPTMFIAELALL----DTGASYD 303
Query: 182 --SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
+++ + G P +M+ + A++ YGMTETS T T +L
Sbjct: 304 LSTLRTGIMAGSPCPEAVMRRVIDEMNMAEVSICYGMTETSPVST-------QTRTDDEL 356
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW 293
G V G+ PH+E+K+ + V G TRG VM YW
Sbjct: 357 DLRVGTV-------------GRVGPHLEIKIVDPVTREVLPRGETGEFCTRGYSVMQGYW 403
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
++ + W+ TGD+G + D G + GR + GGEN+YP E+E L HP
Sbjct: 404 NEPEKTADAIDADGWMRTGDLGVMGDDGYARITGRIKDMVIRGGENIYPREIEEFLYTHP 463
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
I+ V+G+ + + E ++A VR+R+ L ++ +R+ +
Sbjct: 464 DIVDAQVIGVPDEKYGEELMAWVRVRDGAA---------------PLDADAVREFA-TGH 507
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
++ K PR +V + FP+T TGK+R+ E+R + + L
Sbjct: 508 ISRHKIPR-YVHVVEEFPMTVTGKVRKVEMREKSIEFL 544
>gi|71994690|ref|NP_001023937.1| Protein ACS-1, isoform a [Caenorhabditis elegans]
gi|351063224|emb|CCD71310.1| Protein ACS-1, isoform a [Caenorhabditis elegans]
Length = 623
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 183/405 (45%), Gaps = 47/405 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA-PLCHIGG-- 120
P+ ++ I +TSGTTG PKG ++H ++ + GY E + PL H G
Sbjct: 252 PDDSLNIQYTSGTTGQPKGATLTHHNVLNNAFFVGLRAGYSEKKTIICIPNPLYHCFGCV 311
Query: 121 LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ A+ + C P F++ +AL+A+ + T+L P + D+ +
Sbjct: 312 MGVLAALTHLQTCVFPAPSFDALAALQAIHEEKCTALYGTPTMFIDMIN--HPEYANYNY 369
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
DS++ G P L + + YG TETS ++FM+ D + P Q
Sbjct: 370 DSIRSGFIAGAPCPITLCRRLVQDMHMTDMQVCYGTTETSP-VSFMSTRD---DPPEQRI 425
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKP 300
++ G++ + A V+ + C G ++ RG VM YW+
Sbjct: 426 KSVGHIMDHL-----------EAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTK 474
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
T + W TGDI + D G + +VGR I GGEN+YP EVE L +H + + +
Sbjct: 475 KEITQDRWYHTGDIAVMHDNGTISIVGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHI 534
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VG+ + R E+V A VRL ES E + E ++ C+ K + FK P
Sbjct: 535 VGVPDERFGEVVCAWVRLHES--------------AEGKTTEEDIKAWCKGK-IAHFKIP 579
Query: 421 RLFVLWRK--PFPLTSTGKIRRDEVR---------REVMSHLKSL 454
R ++L++K FPLT TGK+++ E+R ++V+SH L
Sbjct: 580 R-YILFKKEYEFPLTVTGKVKKFEIREMSKIELGLQQVVSHFSEL 623
>gi|407689016|ref|YP_006804189.1| AMP-binding protein [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|407292396|gb|AFT96708.1| AMP-binding domain protein [Alteromonas macleodii str. 'Balearic
Sea AD45']
Length = 579
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 194/440 (44%), Gaps = 47/440 (10%)
Query: 20 IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 79
+PSL++ ++G + + L + + + + + + + I FTSGTTG+
Sbjct: 172 LPSLKYVYTIGDKPVEGLQAFSALQIEPTEALKSQLEAVESNLSADDNINIQFTSGTTGN 231
Query: 80 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIP 138
PKG ++H ++ L + + D PL H G+ + L GAC VF
Sbjct: 232 PKGATLTHRNILNNGLLVSQAMRFTHKDKLCIPVPLYHCFGMVLGNLVCLASGACAVFPG 291
Query: 139 K-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 197
+ F+ ++ L VE+ T L VP + L K +++ + G P EL
Sbjct: 292 ESFDPETTLRTVEEEKCTGLHGVPTMFIAELELSNFKSF--DLSTLRTGVMAGSTCPEEL 349
Query: 198 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 257
M++ + F +++ YG TE S + +T D E Q
Sbjct: 350 MRKVHSEFYMTEVVIGYGQTE-CSPINHITDIDSPFEK-------------------QVK 389
Query: 258 CVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 312
VG+ PH E+K+ + V G I RG VM YW + + E WL +G
Sbjct: 390 TVGRAMPHTEVKIIDPQGNTVPIGEPGEICARGYCVMKGYWGDEIKTKATIDDEGWLHSG 449
Query: 313 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 372
D+G +D+ G V +VGR I GGEN+YP E+E VL QH + V GI + + E V
Sbjct: 450 DLGEMDEEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHADVSDAAVFGIPDNKYGEQV 509
Query: 373 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 432
++ +E+ E DQ +R + + K L FK P+ ++ K +P+
Sbjct: 510 CLWIKAKENRHIDE---DQ-------------IRDYLKSK-LAYFKVPK-YISVVKEYPM 551
Query: 433 TSTGKIRRDEVRREVMSHLK 452
T TGK+++ ++R ++ LK
Sbjct: 552 TVTGKLQKFKMRECMIETLK 571
>gi|318057799|ref|ZP_07976522.1| AMP-binding domain protein [Streptomyces sp. SA3_actG]
gi|318080550|ref|ZP_07987882.1| AMP-binding domain protein [Streptomyces sp. SA3_actF]
Length = 544
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 175/382 (45%), Gaps = 49/382 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMV 130
+TSGTTG PKG +SH L+ +GY D P H G+ +
Sbjct: 195 YTSGTTGFPKGATLSHHNLLNNGFWVGETIGYTPSDRVCLPVPFFHCFGMVMGNLGATSH 254
Query: 131 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GAC V P FE+++ LEAVE+ T+L VP + +A L S++ +
Sbjct: 255 GACIVIPAPSFEARATLEAVEKERCTALYGVPTMF--IAELNLPDFGSFDLTSLRTGIMA 312
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 313 GSPCPVEVMKRVVAEMHMAEVSICYGMTETSP-VSCQTRADDDLE--------------- 356
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 303
H+ VG+ PH+E+KV S G + TRG VML YW+ V
Sbjct: 357 --HRTG--TVGRVLPHLEVKVVDPVSGVTVPRGTQGELCTRGYSVMLGYWEDPERTAEVV 412
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
W+ TGD+ + + G V + GR I GGEN+YP E+E L HP I + VVG+
Sbjct: 413 DPGRWMHTGDLALMREDGYVEIAGRIKDMIIRGGENIYPREIEEFLYTHPKISDVQVVGV 472
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RL 422
+AR E V+ACV R+ D + ++ +R CR++ L +K P R+
Sbjct: 473 PDARYGESVLACVIPRDP-------ADAPTLDE--------IRAFCRDR-LASYKIPSRV 516
Query: 423 FVLWRKPFPLTSTGKIRRDEVR 444
VL FP+T +GK+R+ E+R
Sbjct: 517 EVL--GTFPMTVSGKVRKIELR 536
>gi|385675554|ref|ZP_10049482.1| fatty-acyl-CoA synthase [Amycolatopsis sp. ATCC 39116]
Length = 503
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 180/390 (46%), Gaps = 52/390 (13%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
P+ + +TSGTT PKGV I+H+ L+ ++L +I G D L PL H+GGL
Sbjct: 152 GPDALQRLMYTSGTTSRPKGVCITHTNLLYKNLGQIVEFGLTSADTTLVCGPLYHVGGLD 211
Query: 123 -SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
A+A L G + KF+++ ++ +E+ T++ P++M L L + T +
Sbjct: 212 LPALATLHAGGSLLLTRKFDAREVVDIIERDRPTNVWLAPSMMNALLHLPGI--TERDTS 269
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ ++ GG +P L++ FP A AYG+TET S TF
Sbjct: 270 SIRFVIGGGEKMPVPLVERIRAVFPSAWFADAYGLTETVSGDTFN--------------- 314
Query: 242 AFGNVTPNSVHQPQGV-CVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-D 294
++ H V VG+P H+ +++ + V G I G V YW D
Sbjct: 315 -------DAEHMLSKVGSVGRPVVHLRVRIVDESGREVPRGQLGEITLSGPKVFAGYWRD 367
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
++ G W TGDIG +D+ G +++ R+ I SGGEN+ EVE VL +HP
Sbjct: 368 PDATAKALRDG--WFHTGDIGRLDEDGYLYVEDRKKDMIVSGGENIATPEVERVLYEHPD 425
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
++ VVG+ + R E+ A V LR + D + L CR++ L
Sbjct: 426 VVEAAVVGMPHERWGEVPKAFVVLRPG-----ATVDAAG-----------LVAFCRDR-L 468
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
FK P V + P T +GK+ + ++R
Sbjct: 469 AKFKVP-AEVRFLDQLPRTPSGKVLKRDLR 497
>gi|288931421|ref|YP_003435481.1| AMP-dependent synthetase and ligase [Ferroglobus placidus DSM
10642]
gi|288893669|gb|ADC65206.1| AMP-dependent synthetase and ligase [Ferroglobus placidus DSM
10642]
Length = 552
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 180/394 (45%), Gaps = 55/394 (13%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQS-LAKIAIVGYGEDDVYLHTAPLCHIGGL-S 122
E + +T GTTG PKG V +H L++ + + I + DV+ P+ H G+ +
Sbjct: 195 EDVASLTYTGGTTGRPKGAVYTHRNLMIDAKIFSIVLDARKGKDVFSGLMPMFHGNGIWT 254
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
S M + V P FE+ L AVE++ +T + VP + + VK+ + S
Sbjct: 255 SNMNVFYNAGTVVLFPYFEAGEFLRAVERYRITQIHCVPTHLVAIVNHPEVKR--RDLSS 312
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
V+ I G +P EL+++ P A +I +G+TE +
Sbjct: 313 VRVISVGSAPVPIELLRKVKELMPDATVIEQWGLTEAA---------------------I 351
Query: 243 FGNVTPNSVHQPQGV-CVGKPAPHVELKVCSD--------GSSHVGRILTRGAHVMLRYW 293
G T N VH V G P P VE+K+ G +VG I+ R ++ YW
Sbjct: 352 IG--TSNPVHGVIKVGSAGMPVPSVEIKIVDPETGKDLPPGEENVGEIVLRSKKIIREYW 409
Query: 294 -DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
D K ++ G WL TGDIG +D+ G +++V R+ I G NVYP EVE VL +H
Sbjct: 410 NDPERTKEAIRDG--WLYTGDIGYMDEDGYIYIVDRKKDMIIVSGYNVYPSEVEEVLYRH 467
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P ++ V+G+ + E+ A + L+ ++ ++ E + + R K
Sbjct: 468 PAVLECAVIGVPDEYRGEVPKAFIVLKPEYKGK--------------VTEEEIIEFAR-K 512
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
+L +K PR+ V +R P ++ GKI R +R E
Sbjct: 513 HLAAYKIPRI-VEFRDELPKSAVGKILRRVLREE 545
>gi|226366513|ref|YP_002784296.1| acid--CoA ligase [Rhodococcus opacus B4]
gi|226245003|dbj|BAH55351.1| putative acid--CoA ligase [Rhodococcus opacus B4]
Length = 510
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 181/395 (45%), Gaps = 47/395 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ I+ FTSGTT +PKGVV+ HS L+ + + E D L + P H+ G+ +
Sbjct: 142 PDAPAIVLFTSGTTSAPKGVVLRHSHLLSYVMGTVEFASAEETDGALISVPPYHVAGMGT 201
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 181
+ G +++P+F++ +E TS + VP + L R+ G D
Sbjct: 202 IVTNFYAGRKMIYLPQFDAADWVELARTAKATSAMVVPTM------LDRIVDHLGGSDAD 255
Query: 182 --SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
+++ + GG +P ++ A +FP ++AYG+TETSS++ + D +
Sbjct: 256 VPTLRSLSYGGARMPRPTLEAALRAFPNVGFVNAYGLTETSSTIALLGPEDHRAALESED 315
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWD 294
P + +G+P P +E+++ V G + RG V
Sbjct: 316 PAVRARLG----------SIGRPVPGIEVEIRDAYDKPVAPGDEGELWVRGPQVS----G 361
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
+++ SV + W T D+ D G +++VGR + I GGEN+ P E+E VL++HP
Sbjct: 362 EYMGSGSVLDADGWFPTRDLAFEDVEGFLFVVGRNDDTIIRGGENIAPAEIEDVLVEHPR 421
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ +VVVGI + + +VA V K + +E LRQ R + L
Sbjct: 422 VRSVVVVGIPDDHWGQAIVATV------------VPVPGKVPD----AEELRQFVRAR-L 464
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 449
G + P V +R P T TGKI R ++ E+++
Sbjct: 465 RGSRTPDRIV-YRSELPTTLTGKILRKDIVAEIVA 498
>gi|167921063|ref|ZP_02508154.1| acyl-CoA synthetase [Burkholderia pseudomallei BCC215]
Length = 576
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 201/440 (45%), Gaps = 49/440 (11%)
Query: 20 IPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
+PSLR V++ ++ + ++ D+L S R + + I FTSGTTG
Sbjct: 170 VPSLRTVVTMSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTG 229
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 137
SPKG ++H ++ + + ++ E D PL H G+ S +A + VGA VF
Sbjct: 230 SPKGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSVGAKMVFP 289
Query: 138 -PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 196
FE + L AV T+L VP + +A L +++ + G P E
Sbjct: 290 GAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIE 347
Query: 197 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 256
MK +++ AYGMTETS P +F + T +S+ + +
Sbjct: 348 TMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RT 387
Query: 257 VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 311
VG+ PH+E K+ + V G + TRG VML YWD A+ + + W+ T
Sbjct: 388 TTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRT 446
Query: 312 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 371
GD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++ E
Sbjct: 447 GDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEE 506
Query: 372 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 431
V A + LR ++ + LR+ C + +K PR +V + P
Sbjct: 507 VCAWIVLRAGET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELP 548
Query: 432 LTSTGKIRRDEVRREVMSHL 451
+T TGK+++ +R ++ L
Sbjct: 549 MTVTGKVQKFVMRERMIDEL 568
>gi|148547532|ref|YP_001267634.1| acyl-CoA synthetase [Pseudomonas putida F1]
gi|395449760|ref|YP_006390013.1| acyl-CoA synthetase [Pseudomonas putida ND6]
gi|148511590|gb|ABQ78450.1| AMP-dependent synthetase and ligase [Pseudomonas putida F1]
gi|388563757|gb|AFK72898.1| acyl-CoA synthetase [Pseudomonas putida ND6]
Length = 557
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 177/391 (45%), Gaps = 47/391 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG +SHS ++ +G E D + PL H G+ A M
Sbjct: 206 IQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHDRLVVPVPLYHCFGMVMANLGCM 265
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ P F+ + L AV Q T+L VP + +A L ++ S++ +
Sbjct: 266 THGSALIYPSDAFDPLATLRAVAQEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T LE VT
Sbjct: 324 MAGATCPIEVMRRVIGEMHMAEVQIAYGMTETSP-VSLQTGAADDLER---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E KV ++G++ +G + TRG VML YW+ A
Sbjct: 374 ----------SVGRTQPRLESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAES 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
E W+ TGD+ +D+ G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDAEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ ++ E +VA VRL SE + LR+ R + + FK PR
Sbjct: 484 VPCSKYGEEIVAWVRLHPGHAVSE----------------DALREWARAR-IAHFKVPRY 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
F + FP+T TGK+++ +R + L +
Sbjct: 527 F-RFVDAFPMTVTGKVQKFRMREISIEELSA 556
>gi|407715183|ref|YP_006835748.1| fatty-acyl-CoA synthase [Burkholderia phenoliruptrix BR3459a]
gi|407237367|gb|AFT87566.1| fatty-acyl-CoA synthase [Burkholderia phenoliruptrix BR3459a]
Length = 576
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 210/453 (46%), Gaps = 61/453 (13%)
Query: 14 ELQHTAIPSLRWHVSL------GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGA 67
+L+ +P+LR+ + + G S V ++ T D+ + + + H A
Sbjct: 164 QLRAARLPALRYVIRMCDTDTPGMLSFSDVIEQGRATLDVARLDEIGNTLSCHE-----A 218
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MA 126
+ I FTSGTTG+PKG ++HS ++ + + E D PL H G+ A +A
Sbjct: 219 INIQFTSGTTGNPKGATLTHSNVVNNARYIAMAMNLSEHDALCIPVPLYHCFGMVLAVLA 278
Query: 127 MLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ VGA VF + F+ + L AV + T+L VP + +A L ++
Sbjct: 279 CVSVGANMVFPGEAFDPAATLAAVAEEQCTALHGVPTMF--IAELDHPNFASYDLSRLRT 336
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E MK+ + ++ AYGMTETS P +F +
Sbjct: 337 GIMAGSPCPIETMKKVVSRMHLGEITIAYGMTETS-------------------PVSFQS 377
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAK 299
T + + + + VG+ PH+E+K+ + V G + TRG VM YW D+ +
Sbjct: 378 STTDPLDK-RTTTVGRIQPHLEVKIVDPLGNIVPVGETGELCTRGYSVMQGYWGDEEKTR 436
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
S+ G W+ TGD+ +ID G +VGR + GGEN+YP E+E L +HP I +
Sbjct: 437 ESIVDG--WMHTGDLATIDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSVQ 494
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V G+ +A+ E V A V LR Q ++E ++Q C + + +K
Sbjct: 495 VFGVPDAKYGEEVCAWVVLRSGEQ----------------ATAEEIQQFC-QGQIAHYKV 537
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
PR ++ + P+T TGK+++ +R +++ L+
Sbjct: 538 PR-YIRFVDELPMTVTGKVQKFVMRERMINELR 569
>gi|119718356|ref|YP_925321.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
gi|119539017|gb|ABL83634.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
Length = 554
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 176/389 (45%), Gaps = 49/389 (12%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG-L 121
+P+ +I +TSGTTG KG ++ H ++ S + + D +++ PL H GG +
Sbjct: 192 SPDDDCMIIYTSGTTGFAKGALLHHLGVVNASSLSAQRANFRDGDCWINPIPLFHTGGGV 251
Query: 122 SSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
++ L V +P+FE L+ +E ++TVP I+ +A L + +
Sbjct: 252 LGSIGTLARRGRQVVVPQFEPGLVLDLIENEGGNLIVTVPTIL--IALLDHPDRPSRDLS 309
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ I+ GG +P +L++ TN +G E LT
Sbjct: 310 SMRTIMCGGAKVPEDLVRR-TNEIVGCDFSILFGQAEMHGVLT----------------- 351
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQ 295
P Q Q +G P HVE+KV + G I RG M Y+
Sbjct: 352 ---QSLPTDSPQDQATTLGIPLVHVEVKVADPVTGEPVPIGQPGEICARGYQTMREYFRM 408
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
A + + WL +GD+G++D+ G + + GR I GGEN++P E+E +L+ HPGI
Sbjct: 409 DEATAATIDRDGWLRSGDVGTMDERGYLQIAGRIKDIIIRGGENIHPLEIEELLIHHPGI 468
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ V+GI ++ E V A VR + ++E L +CR +L
Sbjct: 469 AEVAVIGIPDSHWGEQVAAVVRANGAPP-----------------TAEELHAYCR-ASLA 510
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
FK P+L+ + FP+T +GKIR+ E+R
Sbjct: 511 PFKTPKLWYFVDE-FPMTPSGKIRKVELR 538
>gi|453363630|dbj|GAC80572.1| putative fatty-acid--CoA ligase [Gordonia malaquae NBRC 108250]
Length = 504
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 187/408 (45%), Gaps = 57/408 (13%)
Query: 51 YSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYL 110
+ + L H P+ II +TSGTTG PKGV ++ + L+ + + ++G +D +
Sbjct: 133 FDDQPLAQAHEHEPDDTAIILYTSGTTGRPKGVELTAANLVDTTASFTPVLGLTSNDRFG 192
Query: 111 HTAPLCHIGGLSSAMAMLMV-GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT 169
PL H+ G + M + +V A + F+ + +E V +T+L VP +
Sbjct: 193 TALPLFHVYGQAVIMNLTLVSNASLSLLSPFDPTAMIELVRNDRLTALAGVPTMWN---A 249
Query: 170 LIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT 227
+++ + RD ++ +GG LP E+M+ F A ++ YG+TE++ + +F
Sbjct: 250 MLQASDGYGPRDFEQLRLATSGGASLPVEVMRAFNERFDCA-ILEGYGLTESTGAASFND 308
Query: 228 LYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG----SSHVGRILT 283
++ V +P V P +E++ DG + VG +
Sbjct: 309 IH--------------------RVLKPGTVGPALPGTSIEVR-SPDGDLLPAGEVGNVYL 347
Query: 284 RGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENV 340
+G +M YW+ +P + E+ WL TGD+G +DD G + +V R I GG NV
Sbjct: 348 KGPTIMKGYWN----RPETTAAELRDGWLTTGDLGKLDDDGYLSIVDRAKDLIIRGGYNV 403
Query: 341 YPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLL 400
YP EVE VL +HP I+ + VVG+ + E V A + LR + +K +
Sbjct: 404 YPREVEEVLYEHPDIVEVAVVGVPDDHFGEEVAAVIALRPGTTATVDGIRTWAKTQ---- 459
Query: 401 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVM 448
L+ +K PRL + + + P +TGKI + E+ R+ +
Sbjct: 460 -------------LSAYKVPRL-IQFVETLPKGATGKILKREINRDAI 493
>gi|453076645|ref|ZP_21979416.1| long-chain-fatty-acid--CoA ligase [Rhodococcus triatomae BKS 15-14]
gi|452760842|gb|EME19165.1| long-chain-fatty-acid--CoA ligase [Rhodococcus triatomae BKS 15-14]
Length = 501
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 183/391 (46%), Gaps = 65/391 (16%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG ++H+ +++ +L ++ DDV+L T PL H + M A
Sbjct: 161 VILYTSGTTGKPKGAELTHANMVLNALGHNQVLDTRPDDVHLVTLPLFHSFAQTVQMNAG 220
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV---- 183
+G V +P+F++ +AL + +H VT VP + L + KT GR V
Sbjct: 221 FAMGTTLVLLPRFDASAALTLIARHRVTIFAGVPTMYWAL-----LNKTSAGRADVDLAG 275
Query: 184 --KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
+ ++G +P E+++ + F ++ YG++ETS ++T P PG
Sbjct: 276 LLRIAISGAAAMPVEVLQRFADVF-GVEIREGYGLSETSPTVTLNPFDQPN--RPGS--- 329
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQF 296
+GKP VE+K+ G + V G + RG +VM Y
Sbjct: 330 -----------------IGKPIWGVEVKLIDAGWNEVPVGEPGELCVRGYNVMKGY---- 368
Query: 297 LAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
L +P +T + W TGDI + D+ G ++V R I GG NVYP E+E V++ HP
Sbjct: 369 LGRPEATTEVIRDGWFRTGDIATRDEDGYYFIVDRAKDLIVRGGFNVYPRELEEVIITHP 428
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
+ + VVG+ N R+ E V A V + E++ S+++
Sbjct: 429 EVSLVAVVGVPNERIGEEVKAFVIREPGSELKETDLIDWSRDR----------------- 471
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
L +K PRL V +R P+ +TGK+ + +R
Sbjct: 472 LATYKYPRL-VEFRDTLPMNATGKLLKRALR 501
>gi|56419565|ref|YP_146883.1| long-chain fatty-acid-CoA ligase [Geobacillus kaustophilus HTA426]
gi|56379407|dbj|BAD75315.1| long-chain fatty-acid-CoA ligase [Geobacillus kaustophilus HTA426]
Length = 539
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 186/402 (46%), Gaps = 58/402 (14%)
Query: 55 SLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVG----YGEDDVYL 110
S+ TH A ++ +T GTTG KG +++H + L +G++ YL
Sbjct: 181 SIESTHDVA-----VLQYTGGTTGRSKGAMLTHRNIFANVLQCAEFFKGTFEFGKER-YL 234
Query: 111 HTAPLCHIGGLSSAMAMLMV-GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT 169
PL H+ ++S M + + GA ++ +P+FE K LE + T VP + +
Sbjct: 235 TVIPLFHVFAMTSGMNLAIYQGAENILLPRFELKEVLETIRDKQPTVFPGVPTMYVAITN 294
Query: 170 LIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLY 229
V++ G S+K +G +P ELM++ + A ++ YG++E S +T
Sbjct: 295 TPGVEQY--GISSIKTCNSGSAPMPLELMRD-FEAKTGAVILEGYGLSEASP----VTHC 347
Query: 230 DPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTR 284
+P P + +P V +G P ++ + G+ VG ++ R
Sbjct: 348 NP----------------PFAARKPGTVGIGMPLTEYKVVDVATGTQELPPGEVGELIIR 391
Query: 285 GAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEE 344
G VM YW+ + + + + WL TGD+ SID+ G V +V R+ I +GG N+YP E
Sbjct: 392 GPQVMKGYWN-MPEETAAALRDGWLYTGDLASIDEEGYVTIVDRKKDLIIAGGYNIYPRE 450
Query: 345 VEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEV 404
+E VL +HP + VG+ + E V A + L++ Q SE E
Sbjct: 451 IEEVLYEHPAVKEAAAVGVPDPYRGETVKAIIVLKDGMQASE----------------EE 494
Query: 405 LRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
+ HCR KNL +K PR+ V +R P T+ GKI R +R E
Sbjct: 495 ILAHCR-KNLAAYKVPRI-VEFRAELPKTNVGKILRRALREE 534
>gi|419968544|ref|ZP_14484383.1| long-chain-fatty-acid--CoA ligase, partial [Rhodococcus opacus
M213]
gi|414566066|gb|EKT76920.1| long-chain-fatty-acid--CoA ligase, partial [Rhodococcus opacus
M213]
Length = 515
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 135/442 (30%), Positives = 209/442 (47%), Gaps = 64/442 (14%)
Query: 14 ELQHTAIPS---LRW-HVSLGSSSSDFVN---KRDMLTADILK--GYSLRSLPFTHSWAP 64
E+ H ++ S L W H S+ ++ D + + ++A +L GY+ + +P H
Sbjct: 111 EISHYSVDSGMVLLWAHESVAAADLDEAASGCRVERVSAGLLNEVGYA-KGVPAAHRGES 169
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKI-AIVGYGEDDVYLHTAPLCHIGGLSS 123
+ AVI+ +TSGTTG PKG ++H L A I I+ EDDV L PL H+ GL+
Sbjct: 170 DTAVIL-YTSGTTGVPKGAELTHGGLNRNLRASIDEIMSLTEDDVVLGCLPLFHVFGLTC 228
Query: 124 AM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+ A + GA V + +F++ L A+ H VT + VP + LA L V + +
Sbjct: 229 GLNASVAAGAELVLVARFDAAQVLTAIGAHRVTIFLGVPTMYIALANLPGVDA--RSAAT 286
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ +GG LP+E+++E + A ++ YG++ETS PT T
Sbjct: 287 LRICASGGASLPAEVLREFERRY-GAVIVEGYGLSETS----------PTAST------- 328
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCS-----DGSSHVGRILTRGAHVMLRYWDQFL 297
N V + + +G P VE K+ G VG I RG +VM YW +
Sbjct: 329 ------NVVGRSRVGSIGTPISGVEFKLVGPDGGECGVGEVGEICIRGHNVMKGYWGRPE 382
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
A + E W +GD+G +D+ G ++V R I GG NVYP E+E VL +HP +
Sbjct: 383 ATAAAIDAEGWFHSGDLGKVDEDGFYYIVDRMKDLIIRGGYNVYPREIEEVLYEHPAVRE 442
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG+ +A E V A V LR + + D+ LR++ + + + +
Sbjct: 443 VAVVGLPHAVHGEEVGAAVSLRSG---ASATTDE-------------LREYVKAR-VAPY 485
Query: 418 KAPRLFVLW-RKPFPLTSTGKI 438
K PRL +W P TGKI
Sbjct: 486 KYPRL--IWILDSLPKGGTGKI 505
>gi|288553808|ref|YP_003425743.1| AMP-dependent synthetase and ligase [Bacillus pseudofirmus OF4]
gi|288544968|gb|ADC48851.1| AMP-dependent synthetase and ligase [Bacillus pseudofirmus OF4]
Length = 491
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 185/393 (47%), Gaps = 62/393 (15%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS-AMA 126
+++ +T GTTG PKGVV++H ++ + I G DD + + P+ H GGL++ ++
Sbjct: 149 LLLIYTGGTTGLPKGVVLTHQSVFFNMINTITSWGLTSDDKTITSLPMFHTGGLNALSLP 208
Query: 127 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK-TWKGRDSVKK 185
+L +G + +F+ + ++ +E+ T ++ VP + L K+ T++ SV
Sbjct: 209 ILHIGGTVILSDQFDGEKTIQLIEEFQCTVILLVPTMYHLLIKAPSFKEATFR---SVHT 265
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLI--SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
L+GG + K +F K L YG+TE + F
Sbjct: 266 FLSGGAPCSYVIYK----AFQKKGLAFKEGYGLTEAGPNNFF------------------ 303
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLA 298
+ P+ +G VGKP + E+K+ + VG I RG HV YW
Sbjct: 304 --IDPSEAVSKRG-SVGKPMLYNEVKIIKENGEEADHDEVGEICIRGLHVFDSYWQ---- 356
Query: 299 KPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
KP ++T V WL TGD+G D G ++VGR+ I +GGENVYP EVE VL +HP +
Sbjct: 357 KPEITTNTVINGWLHTGDLGRRDKEGYFYIVGRKKDMIITGGENVYPLEVEHVLNEHPAV 416
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
VVG+A+ + E+V A + ++ K LS E L HC ++ L
Sbjct: 417 SEAAVVGLADEKWGEVVSAFIVVK----------------KNFTLSEEELLAHC-QRTLG 459
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVM 448
+K P+ + + + P T GK+ + ++ E +
Sbjct: 460 RYKIPKR-ITFVEELPKTPVGKVDKKKLFTEAV 491
>gi|319792929|ref|YP_004154569.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
gi|315595392|gb|ADU36458.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
Length = 519
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 171/391 (43%), Gaps = 62/391 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV++SH+ + LA A YLH AP+ H+ + A +
Sbjct: 163 IFYTGGTTGFPKGVMLSHTNMGSSGLALHAERLAPPGGCYLHAAPMFHLADMGLATPHWL 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKIL 187
G H IP F + L A+E+ VT ++ VP + + L+ + RD S+K I
Sbjct: 223 EGNTHSIIPMFSPEGVLHAIEKDRVTHILLVPTM---IQMLVDHPAMREPRDLASLKCIA 279
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G + ++ A ++FP + AYGMTE S +
Sbjct: 280 YGASPISESVLNRAMDAFPGVDFVQAYGMTELSP---------------------LATIN 318
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCS-------DGSSH----VGRILTRGAHVMLRYWDQF 296
P H +G +GK C+ DG+ VG I RG +VM YW+
Sbjct: 319 PARNHTAEGRKLGKLRSAGRASYCTEVRIVDADGAEAPRGTVGEIAVRGPNVMQGYWN-- 376
Query: 297 LAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
KP + V W+ TGD +DD G V++V R I SGGEN+Y EVE + QHP
Sbjct: 377 --KPEQTAAAVRDGWMHTGDGAYMDDDGYVFVVDRLKDMIISGGENIYSAEVENAITQHP 434
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
+ V+GI + E V A + L+ Q ++ EL+ HC+
Sbjct: 435 AVAACAVIGIPSEEWGEAVHAALVLKPG---------QGIRDDELI-------AHCKTL- 477
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+ G+K PR + PL+ GK+ + ++R
Sbjct: 478 IAGYKCPRSVAIV-DALPLSGAGKVLKTKLR 507
>gi|357038720|ref|ZP_09100517.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355359512|gb|EHG07274.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 503
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 177/393 (45%), Gaps = 58/393 (14%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQS-LAKIAIVGYGEDDVYLHTAPLCHIGGL 121
AP V I +TSGTTG PKG +++H+ + + L ++ + D++ P CH+ +
Sbjct: 159 APSDTVSILYTSGTTGQPKGAMLTHNNFLSNARLNGTRVLHVNDQDLFYTGTPFCHVFYV 218
Query: 122 SSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK----TW 177
S + + GA V +F LE++ ++ VT VP + + +K +W
Sbjct: 219 LSVLGPIYAGAGIVVSERFMPDKTLESISKYRVTHYAGVPTMWIYMLNEYTPEKYDVSSW 278
Query: 178 KGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG 237
+ S G +P E + + N+F + YG TETSS+++F G
Sbjct: 279 RFAQS------AGASMPGEYISKIENTF-RVGFCECYGSTETSSTVSF-----------G 320
Query: 238 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRY 292
+L G V +G PA + K+ D G + VG I+ RG V Y
Sbjct: 321 RL--GHGKVA----------SIGPPAWGYQFKIIGDDGKELGPNEVGEIVLRGPGVFKGY 368
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
W+ A V + + W TGD+G D+ G ++V R+ I GG N+YP E+E VL H
Sbjct: 369 WEMPEATKEVLSEDGWFKTGDLGKYDEDGYYYIVDRKKDMIICGGYNIYPREIEEVLYTH 428
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P + VV+G+ + E+ A ++L++ + + + Q C+E+
Sbjct: 429 PKVFEAVVIGVPDKEKGEIPKAYIKLKQGVEAEPAE----------------IVQFCKER 472
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
+ +K+PR V + FP TGKI + +R
Sbjct: 473 -MAAYKSPRQ-VEFVDDFPKNPTGKILKRVMRE 503
>gi|111023051|ref|YP_706023.1| AMP-binding protein [Rhodococcus jostii RHA1]
gi|110822581|gb|ABG97865.1| CoA ligase [Rhodococcus jostii RHA1]
Length = 545
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 174/388 (44%), Gaps = 47/388 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y E+D P H G+ +A
Sbjct: 192 IQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYTENDRVCIPVPFYHCFGMVMGNLACT 251
Query: 129 MVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA + P F+ + L+AVE TSL VP + +A L S++ +
Sbjct: 252 SHGATMIIPGPSFDPTATLQAVEAEKCTSLYGVPTMF--IAELAEPDFASFDLSSLRTGI 309
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK+ A++ YGMTETS ++ T D T++
Sbjct: 310 MAGSPCPVEVMKQVIEQMGMAEVSICYGMTETSP-VSLQTRSDDTIDQ------------ 356
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ VG+ PH+E+K+ + G + TRG VML YW+
Sbjct: 357 -------RVSTVGRVGPHLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAE 409
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGDIG +D G V + GR + GGENVYP E+E L HP I+ V+
Sbjct: 410 AIDAGRWMHTGDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVI 469
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ +A+ E ++ VR+++ + L + +R+ C K L +K P+
Sbjct: 470 GVPDAKYGEELMVWVRMKDGAE---------------PLDAAKVREFCTGK-LAHYKIPK 513
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMS 449
+V FP+T TGK+R+ E+R + +
Sbjct: 514 -YVHVVDEFPMTVTGKVRKVEMREQSLD 540
>gi|187921091|ref|YP_001890123.1| AMP-dependent synthetase and ligase [Burkholderia phytofirmans
PsJN]
gi|187719529|gb|ACD20752.1| AMP-dependent synthetase and ligase [Burkholderia phytofirmans
PsJN]
Length = 542
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 177/384 (46%), Gaps = 47/384 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+CFTSGTTG+PKGV+ S + + + + +DDV L P+ G + + +M
Sbjct: 195 MCFTSGTTGNPKGVLHSFNTTLCAARFLNRDMYVTQDDVLLAYLPVALNWGYLTLLQSVM 254
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GAC V + +F +++AL + VT + T PA + + ++ T S++ ++ G
Sbjct: 255 AGACTVLLERFSARAALARIASERVTYIPTAPAAIVAMLNAPELRDT--DCSSLRVMVTG 312
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G +++KE +FP A+LI YGM ET ++ L D + G
Sbjct: 313 GASASLDMIKEFETAFPLARLIELYGMLETGFH-SYTRLDDDPVRVIG------------ 359
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVST 304
VG+ +E+ V D V G + RG V L Y D A T
Sbjct: 360 --------TVGRCVDELEIGVLDDHGRLVEHGQTGELSARGPSVHLGYLDNAQANVESFT 411
Query: 305 GEVWLDTGDIGSIDDG-GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W TGD+G I DG GN+ + GR+ I GG+ +P E+E +L +H + I +VGI
Sbjct: 412 SDGWFRTGDLGEIVDGRGNIRISGRKKEIINRGGKKYFPREIEDLLYEHHVFLQIAIVGI 471
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ARL E C L+ Q + + K++ + +K P
Sbjct: 472 PDARLGERNCLCAILKPGAQITLNEVIALLKDR-----------------VADYKLPEEL 514
Query: 424 VLWRKPFPLTSTGKIRRDEVRREV 447
V+ + FP+T +GKIRR E+ +++
Sbjct: 515 VVMDE-FPMTPSGKIRRAELLKQL 537
>gi|365866248|ref|ZP_09405869.1| AMP-dependent synthetase and ligase [Streptomyces sp. W007]
gi|364004240|gb|EHM25359.1| AMP-dependent synthetase and ligase [Streptomyces sp. W007]
Length = 502
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 185/398 (46%), Gaps = 59/398 (14%)
Query: 59 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI 118
T + APE +I +TSGTTG PKG ++H +++ +L + +D+V L PL H
Sbjct: 150 TVATAPEDTAVILYTSGTTGRPKGAELTHRNMVMNALIADRLFTRADDEVMLTALPLFHA 209
Query: 119 GGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVP----AIMADLATLIRV 173
G S+ M M L+ GA V P+F+++ AL + + VT VP A++ +L
Sbjct: 210 FGQSAVMNMGLLRGATLVLQPRFDAEEALRLMRREGVTFFAGVPTMYWALLRELG----- 264
Query: 174 KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 233
T GR ++ ++GG LP E+ K+ +F + YG++ETS F
Sbjct: 265 GGTPPGR--LRTAVSGGAALPVEVFKQFDEAF-GVGVQEGYGLSETSPVACF-------- 313
Query: 234 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHV 288
P LP P+ +G+P VE+K+ D V G I RG +V
Sbjct: 314 -NPPGLP-------------PRPGSIGRPVWGVEMKLVDDSWRTVPGDGPGEIAIRGHNV 359
Query: 289 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 348
M Y+ + S + + W TGDI D+ G ++V R I GG NVYP E+E V
Sbjct: 360 MKGYYRRPHDTDS-AIRDGWFRTGDIARRDEDGYYYVVDRVKDLIIRGGFNVYPREIEEV 418
Query: 349 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 408
L+ HP + VVG+ +A E V A V + D L + L
Sbjct: 419 LITHPAVSMAAVVGVPHATHGEDVKAFV-------IPVAGAD---------LREDELIAW 462
Query: 409 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
CRE+ + +K PR V +R PLTSTGKI + E+ E
Sbjct: 463 CRER-MAAYKYPR-SVEFRDSLPLTSTGKILKRELTAE 498
>gi|341880983|gb|EGT36918.1| hypothetical protein CAEBREN_11693 [Caenorhabditis brenneri]
Length = 597
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 182/405 (44%), Gaps = 47/405 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA-PLCHIGG-- 120
P+ ++ I +TSGTTG PKG ++H ++ + GY E + PL H G
Sbjct: 226 PDDSLNIQYTSGTTGQPKGATLTHHNVLNNAFFVGLRAGYSEKKTIICIPNPLYHCFGCV 285
Query: 121 LSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ A+ + C P F++ +AL+A+ + T+L P + D+
Sbjct: 286 MGVLAALTHLQTCVFPAPSFDALAALQAIHEEKCTALYGTPTMFIDMINHPEYGNY--NY 343
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
DS++ G P L + + YG TETS ++FM+ D + P Q
Sbjct: 344 DSIRSGFIAGAPCPITLCRRLVQDMHMTDMQVCYGTTETSP-VSFMSTRD---DPPEQRI 399
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKP 300
++ G++ + A V+ + C G ++ RG VM YW+
Sbjct: 400 KSVGHIMDHL-----------EAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTK 448
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
T + W TGDI + D G + +VGR I GGEN+YP EVE L +H + + +
Sbjct: 449 KEITQDRWYHTGDIAVMHDNGTISIVGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHI 508
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VG+ + R E+V A VRL ES E + E ++ C+ K + FK P
Sbjct: 509 VGVPDERFGEVVCAWVRLHES--------------AEGKTTEEDIKAWCKGK-IAHFKIP 553
Query: 421 RLFVLWRKP--FPLTSTGKIRRDEVR---------REVMSHLKSL 454
R ++L++K FPLT TGK+++ E+R ++V+SH L
Sbjct: 554 R-YILFKKEHQFPLTVTGKVKKFEIREMSKIELGLQQVVSHFSEL 597
>gi|229492205|ref|ZP_04386013.1| long-chain-fatty-acid--CoA ligase [Rhodococcus erythropolis SK121]
gi|229320831|gb|EEN86644.1| long-chain-fatty-acid--CoA ligase [Rhodococcus erythropolis SK121]
Length = 549
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 129/422 (30%), Positives = 195/422 (46%), Gaps = 54/422 (12%)
Query: 35 DFVNKRDMLTADILKGYSLRSL--PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIV 92
D + K+D+ T D+ L P T APE ++ +TSGTTG PKG + SH+ +
Sbjct: 167 DGIVKKDLGTDDLATLIDEHRLGDPITTDAAPEDIAVLTYTSGTTGPPKGAMTSHANMTF 226
Query: 93 QSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP-KFESKSALEAVEQ 151
+ +G D L APL HI GL +A+ ++ + + +F + L+A+ +
Sbjct: 227 NAQVYRDWLGLTPKDTVLGVAPLFHITGLIGHIAVSVLARMPLVLAYRFHPEVMLDAIRE 286
Query: 152 HCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI 211
H T TV AI A A L + S++ + +GG + S EA + A L
Sbjct: 287 HQPT--FTVGAITAFTALLNTPGCAPEDFTSIRLLYSGGAPI-SPTAAEAVRAMTGAALH 343
Query: 212 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG-VCVGKPAPHVELKV 270
+ YG+TET+S PT P G TP V G + VG P P+ +++
Sbjct: 344 NIYGLTETTS---------PTHAVP------VGADTP--VDPTSGALSVGVPVPNTVVRI 386
Query: 271 CSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGN 322
+G + +G ++ RG V+ YW+ KP S + W TGD+G +D+ G
Sbjct: 387 EDEGGAILPIGEIGELVVRGPQVVRGYWN----KPEESASAIRDGWFHTGDVGFMDEAGW 442
Query: 323 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 382
++V R+ I + G V+P EVE VL +HP + VVGIA+ E V A V L
Sbjct: 443 FYVVDRKKDMIIASGYKVWPREVEDVLAEHPAVREAAVVGIADEYRGETVKAFVSLVAGA 502
Query: 383 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 442
++ E L HC+++ + +K PR VL + P T TGKI R E
Sbjct: 503 S----------------VTPEDLIDHCKQR-MAAYKYPRSVVLVEE-LPKTVTGKILRRE 544
Query: 443 VR 444
+R
Sbjct: 545 LR 546
>gi|126436245|ref|YP_001071936.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. JLS]
gi|126236045|gb|ABN99445.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
Length = 483
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 176/403 (43%), Gaps = 51/403 (12%)
Query: 43 LTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVG 102
L +D L G PF+ + I FTSGTTG PKGV+++H + +
Sbjct: 131 LKSDFLAG----GEPFSRTVDGSDISDIIFTSGTTGRPKGVMMNHRQNLRLYEEWCNLAD 186
Query: 103 YGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 161
+ D YL P H G + + A + GA V +P F+ ++ + +T L P
Sbjct: 187 LRQGDRYLMVNPYFHTFGYKAGLIASFIRGATMVPVPVFDVDRVVDLIAAERITMLPGPP 246
Query: 162 AIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 221
+ L ++ K R V G +P EL++ P L + YG+TE +
Sbjct: 247 TLYHSLLSVADKSKLATLRAGV----TGAADIPVELVRRVLEELPFQTLATGYGLTEAGT 302
Query: 222 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRI 281
+ TL PG +F ++ VG VE+++ DG +
Sbjct: 303 A---------TLSRPGD---SFADIA---------TTVGTACDGVEVRIADDGE-----V 336
Query: 282 LTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 341
L RG VM Y D A WL TGD+G++DD G + +VGR+ GG N Y
Sbjct: 337 LVRGYSVMQGYLDDPAATAEAIDPHGWLHTGDLGTLDDAGRLRIVGRKKDMFIVGGFNAY 396
Query: 342 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLS 401
P E+E LL+HP + V+G+ + R+ ++ A V RE LS
Sbjct: 397 PAEIEGFLLEHPDVAQAAVIGVPDERMGQVGKAFVVRREGHAEP--------------LS 442
Query: 402 SEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+E L RE+ + GFK PR +V + PL +TGK+ +D++R
Sbjct: 443 AEGLIAWSRER-MAGFKVPR-YVEFLDELPLNATGKVMKDQLR 483
>gi|403730567|ref|ZP_10949056.1| putative acyl-CoA synthetase [Gordonia rhizosphera NBRC 16068]
gi|403202447|dbj|GAB93387.1| putative acyl-CoA synthetase [Gordonia rhizosphera NBRC 16068]
Length = 507
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 181/385 (47%), Gaps = 54/385 (14%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
+ A I+ +TSGTTG PKGV++++ L ++ + EDDV L AP+ HI GL+
Sbjct: 158 DDAAILMYTSGTTGRPKGVILTNGNLFWNNINLEHLYDVREDDVTLVVAPMFHIAGLNVT 217
Query: 125 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 181
+ + V I + F++ + L+ VE+ +T++ VPA++ I + + GRD
Sbjct: 218 VFTTLFKGGEVRIHRSFDASAVLDEVERSSITTMFVVPAML----NAICARPDFAGRDLS 273
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ ++ GG +P L++ + ++ YG+TETS + F+T + L G
Sbjct: 274 SLRVVICGGAPVPEALLRRYADR--GIGVLQGYGLTETSPAAIFLTA-EHALSRIGS--- 327
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 295
G+P VE+++ +D + + G + RG +V YW++
Sbjct: 328 -----------------AGRPPLFVEVQLRTDDGTVITESGVRGEVCLRGPNVSPGYWNR 370
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
A + W TGDIG D G +V R + +GGENV P EVE + HP +
Sbjct: 371 PDATAEAHDADGWFHTGDIGVRDAEGFYAIVDRVKDMVITGGENVSPAEVENAVYTHPAV 430
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ V+G+ + R E V A V LR L+ E LR HC ++L
Sbjct: 431 ADVAVIGVPDERWGEAVTAVVVLRPDAD----------------LTLEQLRDHC-SRSLA 473
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRR 440
+K P +L + P ++GK+++
Sbjct: 474 RYKLPNRLILSDE-LPRNASGKVQK 497
>gi|367470281|ref|ZP_09469993.1| Acetoacetyl-CoA synthetase [Patulibacter sp. I11]
gi|365814636|gb|EHN09822.1| Acetoacetyl-CoA synthetase [Patulibacter sp. I11]
Length = 543
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 172/391 (43%), Gaps = 50/391 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG ++H ++ YGE D P H G+ +A L
Sbjct: 186 IQYTSGTTGFPKGATLTHRNILGNGYLVGNGCRYGEQDRICVPVPFYHCFGMVMGNLAAL 245
Query: 129 MVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 186
GAC V IP F+ + L A TSL VP + +A L +++
Sbjct: 246 AHGAC-VVIPAQAFDPAATLRAAAAERCTSLYGVPTMF--IAMLADPSFDEHDLSTLRTG 302
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
+ G P+E+M++ + ++ YGMTETS T DP L Q G V
Sbjct: 303 IMAGSPCPAEVMRQVIDRMHMGEVTICYGMTETSPVSTQTAADDP-------LEQRVGTV 355
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 300
G+ PHVE+KV + G + TRG VM YW+
Sbjct: 356 -------------GRVHPHVEVKVVDPATGETVPRGETGELCTRGYSVMRGYWNDPGKTA 402
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
G+ W+ TGD+ +ID+ G + +VGR I GGENVYP E+E L HP + + V
Sbjct: 403 EAIDGDGWMHTGDLATIDEQGYLRIVGRSKDMIIRGGENVYPREIEEFLYTHPDVADVQV 462
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ + R E ++A V R + L E +R+ CR + +K P
Sbjct: 463 IGVPDERFGEEIMAWVIPRAG----------------VALDGERIREFCR-GTIAHYKVP 505
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
R +V FP+T TGK+++ +R + + L
Sbjct: 506 R-YVHVTDEFPMTVTGKVQKYLMREQAIEQL 535
>gi|357020947|ref|ZP_09083178.1| AMP-dependent synthetase and ligase [Mycobacterium
thermoresistibile ATCC 19527]
gi|356478695|gb|EHI11832.1| AMP-dependent synthetase and ligase [Mycobacterium
thermoresistibile ATCC 19527]
Length = 498
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 196/419 (46%), Gaps = 47/419 (11%)
Query: 42 MLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIV 101
+LT+D + P P+ ++ FTSGTT PK V ++H+ L +
Sbjct: 116 VLTSDEFVTAARAGEPAAEFADPDDVAVVLFTSGTTSRPKAVELTHNNLTSYVTGTVEFD 175
Query: 102 GYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 161
+D L P HI G+ +AM+ L G V++ F+++ + V + VT+ VP
Sbjct: 176 SAATEDAALICVPPYHIAGVGAAMSNLYAGRKMVYLRHFDARDWVRLVREEKVTTATVVP 235
Query: 162 AIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTET 219
++ + T+++ G D +++ + GG + L++ A P ++AYG+TET
Sbjct: 236 TMLDRIVTVLQT----DGGDLPTLRNLAYGGSKVALPLVRTALELLPNVGFVNAYGLTET 291
Query: 220 SSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----G 274
SS++ + P +A P +V + G VG+P P VE+++ ++ G
Sbjct: 292 SSTIAVL--------GPEDHREALAATDP-AVARRLG-SVGRPVPGVEVQIRAEDGTVLG 341
Query: 275 SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIK 334
G + RG V RY + SV E W T D+ +D+ G +++ GR + I
Sbjct: 342 PGETGELFVRGEQVSGRYAEIG----SVLDAEGWFPTKDVAMLDEDGYLFIGGRSDDTII 397
Query: 335 SGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSK 394
GGEN+ P E+E VL++HP + VVVG + + +++VA V E
Sbjct: 398 RGGENIAPAEIENVLVEHPQVREAVVVGPEDPQWGQILVAVVVPAEGETP---------- 447
Query: 395 NKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
E LR H R K+L G + P V++R P+ + GK+ +RR+++ L++
Sbjct: 448 ------DPEELRAHVR-KHLRGSRTPDK-VVFRTELPVNALGKV----LRRQLVDELQT 494
>gi|308179067|ref|YP_003918473.1| fatty-acid--CoA ligase [Arthrobacter arilaitensis Re117]
gi|307746530|emb|CBT77502.1| putative fatty-acid--CoA ligase [Arthrobacter arilaitensis Re117]
Length = 535
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 177/399 (44%), Gaps = 53/399 (13%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
PE + I +TSGTTG PKG V+SH ++ ++ E D P H G+
Sbjct: 179 PEDPINIQYTSGTTGYPKGAVLSHRNILNNGYQVTGMIDLDEHDRLCIPVPFYHCFGMVM 238
Query: 124 AMAMLMVGACHVFIPK--FESKSALEAV-EQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ IP F++++ L V E+HC T L VP + + +K
Sbjct: 239 GNLGCTSRGTTIVIPAPGFDAETTLRVVAEEHC-TGLYGVPTMFIAMQN----HPNFKDY 293
Query: 181 D--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
D +++ + G P E+M+ + + AYGMTETS ++ T D LE
Sbjct: 294 DLSALRTGIMAGSICPVEVMRRCVEEMGMSAVSIAYGMTETSP-VSCQTRSDDDLER--- 349
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRY 292
+ +G+ PHVE+KV S G TRG VML Y
Sbjct: 350 ----------------RTSTIGRVHPHVEIKVVDPVSGETLERGETGEYCTRGYSVMLGY 393
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
W+ + E W+ TGD+ + + G +VGR + GGEN+YP E+E L +H
Sbjct: 394 WNDEEKTRAAIDDEGWMHTGDLAVMREDGYCTIVGRIKDMVIRGGENIYPAEIEEFLYKH 453
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P I + V+G+ +++ E+V AC+R++ Q L+ + +R++
Sbjct: 454 PDIEDVSVIGVPDSKFGEVVCACIRMKAGRQ---------------PLTVDAIREYS-AG 497
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
L +K P +V + FP T TGKIR++++R + L
Sbjct: 498 QLAHYKVP-AYVRILEEFPTTVTGKIRKNQLREDAARSL 535
>gi|297189973|ref|ZP_06907371.1| feruloyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
gi|197718630|gb|EDY62538.1| feruloyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
Length = 515
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 186/401 (46%), Gaps = 59/401 (14%)
Query: 56 LPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS---ALIVQSLAKIAIVGYGEDDVYLHT 112
L THS E A + +T GTTG PKGVV+SH+ A ++ + A + +V G +
Sbjct: 150 LEETHSADGEPAGVF-YTGGTTGFPKGVVLSHANIWASVLSAAATVRLVRQGGR--MMVA 206
Query: 113 APLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR 172
AP+ H+ GLS A ++G HVF+P FE + L+ +E+H T+ + VPA++ L
Sbjct: 207 APMFHLAGLSCWYAQSLIGGSHVFVPAFEPAAVLQVIEKHRPTATLLVPAMVQMLVD--- 263
Query: 173 VKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD 230
RD S++ ++ G + L++ P+ L+ YGMTE + + + D
Sbjct: 264 -HPDAGSRDLSSLETLVYGAAPISRALLERTHQVLPRTSLVQGYGMTEMAPCIAMLGADD 322
Query: 231 PTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRG 285
G+L ++ G VE+++ + V G I+ RG
Sbjct: 323 ---HNDGRLLRSAGRALAG----------------VEVRIVDREGAEVPQGTVGEIVARG 363
Query: 286 AHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 345
+M YW + G W+ TGD G +D G ++LV R I +G ENVY EV
Sbjct: 364 EGMMQGYWKKPHETAEALRGG-WMHTGDAGYLDADGYLFLVDRVKDMIVTGAENVYSTEV 422
Query: 346 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 405
E + QHP + V+G+ +A+ E V A V LR C ++E +
Sbjct: 423 ENAVAQHPSVAACAVIGVPDAQWGERVHAVVVLR-------PGCTA---------TAEEI 466
Query: 406 RQHCREKNLTGFKAPR--LFVLWRKPFPLTSTGKIRRDEVR 444
R H + + G+KAPR FV PL++ GK+ + E+R
Sbjct: 467 RDHTKSL-IAGYKAPRSCEFV---DELPLSAAGKVLKRELR 503
>gi|221213085|ref|ZP_03586061.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD1]
gi|221167298|gb|EED99768.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD1]
Length = 564
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 197/441 (44%), Gaps = 54/441 (12%)
Query: 20 IPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
+P LRW V LG+ + + +++ ++R+ S + I FTSGTTG
Sbjct: 158 LPQLRWLVHLGNEPIAGVMCFSELMALGDPDDPAVRAA--GESLKATDPINIQFTSGTTG 215
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 138
PKG +SH ++ + + E D PL H G+ + + P
Sbjct: 216 FPKGATLSHRNILNNGFFVGEAMRFTERDRLCVPVPLYHCFGMVMGNLNCLAHGATIVYP 275
Query: 139 --KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 196
F+ S L AV+ T+L VP + +A L + +S++ G P E
Sbjct: 276 GESFDPVSVLTAVQDERCTALYGVPTMF--IAMLSHPRFAEFDLNSLRTGCMAGSPCPIE 333
Query: 197 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 256
+MK + ++ AYGMTETS T++TP L + G V
Sbjct: 334 VMKRVVDDMHMKEVTIAYGMTETSPVSC-----QSTVDTP--LERRVGTV---------- 376
Query: 257 VCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYW-DQFLAKPSVSTGEVWL 309
G+ PH+E+K+ + G + TRG VM YW D+ + ++ E W+
Sbjct: 377 ---GQVHPHLEIKLVDPDTGRTVDIGETGELCTRGYSVMNGYWNDEKRTREAIDEDE-WM 432
Query: 310 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 369
TGD+ ++D G V +VGR + GGENVYP E+E L HP I + VVG+ + +
Sbjct: 433 HTGDLATMDAKGYVNIVGRIKDMVIRGGENVYPREIEEFLYGHPAIRDVQVVGVPDPKYG 492
Query: 370 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 429
E + A V LR + L+ E LR HC+ + + +K PR +V +
Sbjct: 493 EELCAWVVLR----------------PDHTLTEEELRAHCKGQ-IAHYKVPR-YVRFVDE 534
Query: 430 FPLTSTGKIRRDEVRREVMSH 450
FP+T TGKI++ + RE+M H
Sbjct: 535 FPMTITGKIQKYRI-REIMQH 554
>gi|94309555|ref|YP_582765.1| AMP-binding domain protein [Cupriavidus metallidurans CH34]
gi|93353407|gb|ABF07496.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Cupriavidus
metallidurans CH34]
Length = 570
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 187/394 (47%), Gaps = 50/394 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAML 128
I FTSGTTG+PKG ++H ++ + + + E D P H G+ +A +
Sbjct: 216 IQFTSGTTGAPKGATLTHRNIVNNGRSIAGAMRFSEQDKLCIPVPFYHCFGMVLGVLACV 275
Query: 129 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA VF + F + + AV + T+L VP + +A L + S++ +
Sbjct: 276 STGASMVFPGEAFHPGATMAAVSEERCTALHGVPTMF--IAQLDDPDFSKYDFSSLRTGI 333
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK A++ AYGMTETS P +F + T
Sbjct: 334 MAGAPCPVEVMKRVMADMHLAEITIAYGMTETS-------------------PVSFQSAT 374
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWD-QFLAKPS 301
+ + + + VG+ PH+E KV DG + G + TRG VML YWD + + +
Sbjct: 375 DDPIDK-RVSTVGRVQPHLECKVVDVDGQTLPIGATGELCTRGYSVMLGYWDDEERTREA 433
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ G W+ TGD+ +ID+ G +VGR + GGENVYP E+E L +HP + + V
Sbjct: 434 IRDG--WMHTGDLATIDEEGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQSVQVF 491
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E V A + L+ QS+ ++E +R +CR++ + +K PR
Sbjct: 492 GVPDEKYGEEVCAWIVLKPG---------QSATDEE-------IRNYCRDQ-IAHYKIPR 534
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLP 455
++ + P+T TGK+++ +R ++ L P
Sbjct: 535 -YIRFVDEMPMTITGKVQKFVMRDQMTQELGISP 567
>gi|24373535|ref|NP_717578.1| AMP-dependent synthetase and ligase family protein [Shewanella
oneidensis MR-1]
gi|24347847|gb|AAN55022.1| AMP-dependent synthetase and ligase family protein [Shewanella
oneidensis MR-1]
Length = 578
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 194/445 (43%), Gaps = 47/445 (10%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
+LQ A+P L++ + +G+ S + D L ++ + +P A+ I FT
Sbjct: 168 QLQAKALPELQFVIRMGAEKSPGMLNFDDLLVEVSADDKAMLERIANGLSPYDAINIQFT 227
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGA 132
SGTTGSPKG +SH ++ + + DD PL H G+ + L GA
Sbjct: 228 SGTTGSPKGATLSHHNILNNGYLVAEAMKFTCDDKLCIPVPLYHCFGMVLGNLVCLAKGA 287
Query: 133 CHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
VF F+ + LE VE+ T+L VP + +A L + T S++ + G
Sbjct: 288 AAVFPGDSFDPLTTLEVVERERCTALHGVPTMF--IAELEHPEFTRFDLSSLRTGVMAGA 345
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P E+M+ +++ YG TE S L +T D +E
Sbjct: 346 TCPEEVMRRVQQLMYMQEVLIGYGQTE-CSPLNHITEIDSPVEK---------------- 388
Query: 252 HQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 306
+ + VG+ PH E+K+ + + G + +RG +M YW+ + E
Sbjct: 389 ---RVLTVGRALPHTEVKIVDEFGEVLPINQPGEVCSRGYCIMQCYWNDPEKTAATIDRE 445
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
WL +GDIG +D+ G V +VGR I GGEN+YP E+E L H + V G+ +
Sbjct: 446 GWLHSGDIGQMDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVHSD 505
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E V A +++R E E +R EK FK PR ++ +
Sbjct: 506 KYGEEVCAWIKVRSGATIKE----------------EDIRHFLTEK-FAYFKVPR-YIKF 547
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHL 451
+P+T TGKI++ ++R + L
Sbjct: 548 VDQYPMTVTGKIQKFKMRELMYQEL 572
>gi|378951790|ref|YP_005209278.1| acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas fluorescens F113]
gi|359761804|gb|AEV63883.1| Acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas fluorescens F113]
Length = 565
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 176/394 (44%), Gaps = 47/394 (11%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM 127
V I +TSGTTG PKG +SH ++ +G DD + PL H G+
Sbjct: 210 VNIQYTSGTTGFPKGATLSHHNILNNGYMVGESLGLTADDRLVIPVPLYHCFGMVMGNLG 269
Query: 128 LMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
M + P F+ L+AV + T+L VP + +A L + ++ S++
Sbjct: 270 CMTHGSTMIYPNDAFDPLLTLKAVAEEKATALYGVPTMF--IALLDQPQRGDFDVSSLRT 327
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+M+ N A++ AYGMTETS +L+T
Sbjct: 328 GIMAGATCPIEVMRRVINEMHMAEVQIAYGMTETSPV---------SLQT---------- 368
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKP 300
P+ + + VG+ P +E K+ + + VG + TRG VML YW+
Sbjct: 369 -GPSDELELRVTTVGRTQPQLESKIIDEAGNIVSRGAVGELCTRGYSVMLGYWNNPKGTT 427
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+ W+ TGD+ ++D+ G V +VGR I GGEN+YP E+E HP + + V
Sbjct: 428 DAIDPDGWMHTGDLATMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQV 487
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+GI +R E ++A ++ SE L+ C+E+ + FK P
Sbjct: 488 IGIPCSRYGEEIIAWIKFHPGHSASEQE----------------LQAWCKER-IAHFKTP 530
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
R F + FP+T TGKI++ +R + L+ +
Sbjct: 531 RHFKFVEE-FPMTVTGKIQKFRMREISIEELREV 563
>gi|219848072|ref|YP_002462505.1| o-succinylbenzoate--CoA ligase [Chloroflexus aggregans DSM 9485]
gi|219542331|gb|ACL24069.1| O-succinylbenzoate-CoA ligase [Chloroflexus aggregans DSM 9485]
Length = 486
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 183/381 (48%), Gaps = 59/381 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG +++ ++ + +G +DD +L PL H+GGLS + ++
Sbjct: 149 IIYTSGTTGQPKGAILTAGNHWWNAVGSMLNLGLHDDDRWLAVLPLFHVGGLSILLRGVI 208
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G V +F+ V++ IT+ +++A + + + + ++ +L G
Sbjct: 209 YGIPVVLHERFDPA----LVKRDLAEQRITIVSLVAVMLQRLLIVDSTPFPAHLRCVLLG 264
Query: 190 GGGLPSELMKE-ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
GG +P L+++ A P + YGMTE +S + P + Q G+
Sbjct: 265 GGPVPQTLLEQCAARGIP---VTQTYGMTEAASQAATLA--------PAEALQRLGSA-- 311
Query: 249 NSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVS 303
GKP VEL++ SDGS VG I RG + Y L PS
Sbjct: 312 -----------GKPLLPVELRIVRSDGSEAAAGEVGEICLRGPTLSPGY----LGMPSRR 356
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
E W TGD+G +D G +++V RR+ I +GGEN+YP EVEA LL HP ++ + VVG+
Sbjct: 357 PDE-WFRTGDMGYLDADGYLYVVDRRSDLIIAGGENIYPAEVEAALLSHPAVVEVGVVGL 415
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
++ + VA V +R +++E L HCRE+ L G+K PR
Sbjct: 416 SDPEWGQRPVAAVVVR------------------FPVTAESLIAHCRER-LAGYKVPRTI 456
Query: 424 VLWRKPFPLTSTGKIRRDEVR 444
V + P T+ GK+RR ++R
Sbjct: 457 VFVDE-LPRTAAGKLRRHQLR 476
>gi|108800621|ref|YP_640818.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. MCS]
gi|119869760|ref|YP_939712.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. KMS]
gi|108771040|gb|ABG09762.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119695849|gb|ABL92922.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
Length = 483
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 177/403 (43%), Gaps = 51/403 (12%)
Query: 43 LTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVG 102
L +D L G PF+ + I FTSGTTG PKGV+++H + +
Sbjct: 131 LKSDFLAGGE----PFSRTVDSSDISDIIFTSGTTGRPKGVMMNHRQNLRLYEEWCNLAD 186
Query: 103 YGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 161
+ D YL P H G + + A + GA V +P F+ ++ + +T L P
Sbjct: 187 LRQGDRYLMVNPYFHTFGYKAGLIASFIRGATMVPVPVFDVDRVVDLIAAERITMLPGPP 246
Query: 162 AIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 221
+ L ++ K R V G +P EL++ P L + YG+TE +
Sbjct: 247 TLYHSLLSVADKSKLATLRAGV----TGAADIPVELVRRVLEELPFQTLATGYGLTEAGT 302
Query: 222 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRI 281
+ TL PG +F ++ VG VE+++ DG +
Sbjct: 303 A---------TLSRPGD---SFADIA---------TTVGTACDGVEVRIADDGE-----V 336
Query: 282 LTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 341
L RG VM Y D A + WL TGD+G++DD G + +VGR+ GG N Y
Sbjct: 337 LVRGYSVMQGYLDDPAATAEAIDPDGWLHTGDLGTLDDAGRLRIVGRKKDMFIVGGFNAY 396
Query: 342 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLS 401
P E+E LL+HP + V+G+ + R+ ++ A V R+ LS
Sbjct: 397 PAEIEGFLLEHPDVAQAAVIGVPDERMGQVGKAFVVRRDGHAGP--------------LS 442
Query: 402 SEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+E L RE+ + GFK PR +V + PL +TGK+ +D++R
Sbjct: 443 AEGLIAWSRER-MAGFKVPR-YVEFLDELPLNATGKVMKDQLR 483
>gi|379760289|ref|YP_005346686.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
MOTT-64]
gi|378808231|gb|AFC52365.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
MOTT-64]
Length = 467
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 170/376 (45%), Gaps = 51/376 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-L 128
I FTSGTTG PKG +++H + ++ E D YL P H GL + +
Sbjct: 142 IIFTSGTTGRPKGAMLNHGQTLRMYEEWASLADLREGDRYLQINPYFHTFGLKAGLVTSF 201
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ GA + + F+ + +E +E+ +T L P + L ++ K +++ +
Sbjct: 202 LRGATMLPVAVFDIDTVVELIERERITMLPGPPTLYHSLLSVGDKSKL----STLRAAVT 257
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G +P EL++ P L++ YG+TE + TL PG +F +V
Sbjct: 258 GAADIPVELVRRIHGELPFETLMTGYGLTEAGNV---------TLSRPGD---SFEDVAT 305
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 308
+ G P VE+++ DG ++ RG VM Y D A E W
Sbjct: 306 TA---------GLPCDGVEVRIADDGE-----VVVRGYGVMQGYLDDPAATAQAIDAEGW 351
Query: 309 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 368
L TGD+GS DD G + +VGR+ GG N YP E+E LL HP + V+GI + R+
Sbjct: 352 LHTGDLGSFDDAGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGIPDERM 411
Query: 369 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 428
++ A V + +S++ L CR++ + GFK PR V +
Sbjct: 412 GQVGKAFVVRKGE------------------VSADELIGWCRDR-MAGFKVPRA-VQFLD 451
Query: 429 PFPLTSTGKIRRDEVR 444
PL +TGK+ +D++R
Sbjct: 452 SLPLNATGKVMKDQLR 467
>gi|167838422|ref|ZP_02465281.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
gi|424901542|ref|ZP_18325058.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
gi|390931917|gb|EIP89317.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
Length = 576
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 183/389 (47%), Gaps = 48/389 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAML 128
I FTSGTTGSPKG ++H ++ + + ++ E D PL H G+ S +A +
Sbjct: 221 IQFTSGTTGSPKGATLTHRNVVNNARSIARVMRLTEADAMCIPVPLYHCFGMVLSVLACV 280
Query: 129 MVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA VF FE + L AV T+L VP + +A L +++ +
Sbjct: 281 SAGAKMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLGTLRTGI 338
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E MK +++ AYGMTETS P +F + T
Sbjct: 339 MAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSST 379
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 302
+S+ + + VG+ PH+E K+ + V G + TRG VML YWD A+
Sbjct: 380 TDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTRE 437
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G
Sbjct: 438 AVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFG 497
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ +++ E V A + LR E++ E LR+ CR + + +K PR
Sbjct: 498 VPDSKYGEEVCAWIVLR---------------TGEVMTDDE-LREFCRGQ-IAHYKVPR- 539
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+V + P+T TGK+++ +R ++ L
Sbjct: 540 YVRFVDELPMTVTGKVQKFVMRERMIDEL 568
>gi|407803972|ref|ZP_11150802.1| AMP-dependent synthetase/ligase [Alcanivorax sp. W11-5]
gi|407022065|gb|EKE33822.1| AMP-dependent synthetase/ligase [Alcanivorax sp. W11-5]
Length = 518
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 186/383 (48%), Gaps = 47/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG PKGV++SH L ++A++A V L+ APL H L ++ +M
Sbjct: 163 ILYTGGTTGFPKGVMLSHRNLWSSAVARMAEGEPLRHHVSLYVAPLFHTASLGKLISQIM 222
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
V V +P F + + + + + ++ VP+++ + L D +++I G
Sbjct: 223 VAGTSVAVPAFRVEEVMALISRERINDVVLVPSMIQMM--LDHPAFADYDLDCLERITYG 280
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ +++ A +FPKA+ AYGMTET+ ++ ++ LP+A+ +
Sbjct: 281 ASPIALAVLERAMKAFPKAQFSHAYGMTETAPVISINPWFN-------HLPEAWESGIVR 333
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVST 304
S + G+CV E+++ + + V G ++ RG +VML YW KP +
Sbjct: 334 SAGR-AGLCV-------EVRIVDEDDNEVPRGTVGEVIARGPNVMLGYWK----KPEATA 381
Query: 305 GEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ W+ TGD G +D+ G +++V R I SGGENVY EVE +L +H + V+
Sbjct: 382 EALRNGWMHTGDGGYMDENGYLYIVDRIKDMIISGGENVYSAEVENILARHEAVQACAVI 441
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + E V A V RE + +++E L+ CRE L G+K P+
Sbjct: 442 GVPSEAWGEAVHAVVVKREG----------------VSVTAETLQAFCRE-CLAGYKVPK 484
Query: 422 LFVLWRKPFPLTSTGKIRRDEVR 444
V + + P++ GK+ + +R
Sbjct: 485 -SVEFVEALPMSGPGKVLKHVLR 506
>gi|418050918|ref|ZP_12689004.1| o-succinylbenzoate--CoA ligase [Mycobacterium rhodesiae JS60]
gi|353188542|gb|EHB54063.1| o-succinylbenzoate--CoA ligase [Mycobacterium rhodesiae JS60]
Length = 497
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 181/395 (45%), Gaps = 43/395 (10%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ ++ FTSGTT PK V ++H+ L + DV L P HI G+ +
Sbjct: 137 PDEVAVVLFTSGTTSRPKAVELTHNNLTSYVTGTVEFASAEPGDVALICVPPYHIAGVGA 196
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
A++ L G V++ KF+ + VTS VP ++ + T + T ++
Sbjct: 197 ALSNLYAGRKMVYLRKFDPLQWIRLASAEAVTSATVVPTMLDRIITELEANPTPL--PAL 254
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + GG + L+++A P+ ++AYG+TETSS++ +T D +A
Sbjct: 255 RTLAYGGSKVALPLVRKALTLLPEVGFVNAYGLTETSSTIAVLTPDD---------HRAA 305
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLA 298
S + G VG+P P +E+++ D G VG + RG V RY +
Sbjct: 306 HEADDESARKRLG-SVGQPVPGIEVQIRGDDGTVLGPEEVGELFVRGDQVSGRYAEIG-- 362
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
SV E W T D+ +D G +++ GR + I GGEN+ P EVE VL++HP + +
Sbjct: 363 --SVLDAEGWFPTKDVAYLDAEGYLFIGGRSDDTIIRGGENIAPAEVEDVLVEHPHVRDV 420
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG+ + +++VA V + E LR H R + L G +
Sbjct: 421 AVVGVEDDEWGQIMVAVV----------------VPVAHITPDPEDLRAHVRTQ-LRGSR 463
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
P V++R P T TGK+ +RR++ LKS
Sbjct: 464 TPDR-VVFRHELPTTPTGKV----LRRQLADELKS 493
>gi|183984656|ref|YP_001852947.1| long-chain-fatty-acid--CoA ligase [Mycobacterium marinum M]
gi|183177982|gb|ACC43092.1| fatty-acid-CoA ligase FadD3_2 [Mycobacterium marinum M]
Length = 479
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 184/411 (44%), Gaps = 48/411 (11%)
Query: 35 DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 94
DF + D+ G+ PF + + I +TSGTTG PKGV++ H+ +
Sbjct: 116 DFTVPDGIPAIDLRSGFLECGKPFERAVSGSDIADIVYTSGTTGRPKGVMMDHAQTLRHY 175
Query: 95 LAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPKFESKSALEAVEQHC 153
D YL P HI G + +A L+ GA + + F ++ LE +E
Sbjct: 176 AHWCDRADLRTGDRYLIVNPFFHIFGYKAGCIASLIRGATIIPVRVFVLENVLELIEHER 235
Query: 154 VTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISA 213
+T L P + L + + + S++ + G +P EL++ P +++
Sbjct: 236 ITMLPGPPTLYHSLLS----ARGQRDLSSLRAGVTGAADIPVELIRRVRTELPFQTIMTG 291
Query: 214 YGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD 273
YG+TE + +TL P +F ++ + G +EL D
Sbjct: 292 YGLTEAGT----VTLSKPE--------DSFEDIATTA---------GLACDGIELATADD 330
Query: 274 GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRI 333
G IL RG +VM Y D +A GE WL TGD+G+ID+ G + +VGR+
Sbjct: 331 GE-----ILVRGYNVMKGYLDDPVATAEAIDGEGWLHTGDLGTIDETGRLRVVGRKKDMF 385
Query: 334 KSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSS 393
GG N YP E+E L++H + + V+G+ + RL ++ A V QS
Sbjct: 386 IVGGFNAYPAEIEGFLMEHEAVAQVAVIGVPDERLGQVGKAFV------------VRQSG 433
Query: 394 KNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
K+ LS+E L CRE+ + GFK PR V + PL +TGK+ +D +R
Sbjct: 434 KSA---LSAEDLLGWCRER-MAGFKVPRS-VRFVDALPLNATGKVVKDLLR 479
>gi|407007059|gb|EKE22823.1| hypothetical protein ACD_6C00713G0002 [uncultured bacterium]
Length = 562
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 181/383 (47%), Gaps = 47/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I FTSGTTG+PKG +++H+ ++ + G +D + PL H G+ +A +
Sbjct: 208 IQFTSGTTGNPKGTMLTHNNILNNGYFVGEAIHLGPEDRVCISVPLFHCFGMVMGNLACI 267
Query: 129 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ F L+A++Q T+ VP + +A L + S++ +
Sbjct: 268 THGSAMIYPSAVFNPLETLKAIQQEKCTAAYGVPTMF--IAILEHEQFDEFDLSSLRTGI 325
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ +++ YGMTET+ P + + T
Sbjct: 326 MAGSPCPQEIMQRVIERMHMSEITICYGMTETA-------------------PVSAQSST 366
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSV 302
+SV Q VG+ PH+E+K+ + +G + RG VML YW+ V
Sbjct: 367 ADSVEQRVST-VGRVHPHLEVKIVDENGKVVPRGQLGELCVRGYSVMLGYWEDQDKTQEV 425
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ TGDI +DD G V + GR + GGEN++P+E+E L HP + + V+G
Sbjct: 426 IDAARWMHTGDIAEMDDEGFVKIKGRIKDVVIRGGENLFPKEIEDFLYTHPAVSDVQVIG 485
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + + E + AC+ L E+ +E E +RQ+C+E +++ K PR
Sbjct: 486 VPDHKYGEELCACIILHENDPCTE----------------ETIRQYCKE-HISHNKVPR- 527
Query: 423 FVLWRKPFPLTSTGKIRRDEVRR 445
+V + + FP+T++GK ++ ++R
Sbjct: 528 YVRFFQEFPMTASGKAQKFKLRE 550
>gi|288923180|ref|ZP_06417324.1| AMP-dependent synthetase and ligase [Frankia sp. EUN1f]
gi|288345466|gb|EFC79851.1| AMP-dependent synthetase and ligase [Frankia sp. EUN1f]
Length = 597
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 175/386 (45%), Gaps = 51/386 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AML 128
I FTSGTTG+PKG +++H A + +VG D YL P H GL S + A L
Sbjct: 238 IVFTSGTTGAPKGAMLTHGASTGVYTSWSQLVGLRHGDRYLLVYPFFHTAGLKSGLLACL 297
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKI 186
+VGA V P F+ S L V Q +T L PAI + + G D S++
Sbjct: 298 LVGATLVPHPVFDVPSVLRRVAQERITMLPGPPAIYQSI-----LNTDLAGYDLSSLRLA 352
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
+ G +P EL++ + +++AYG+TET+ + T D
Sbjct: 353 VTGAAAVPVELVRRLRSELGLQTVLTAYGLTETTGTATACRRDD---------------- 396
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPS 301
P ++ + G+ P VE+++ D + + G I+ RG +VM Y+D A
Sbjct: 397 DPETI----AMTSGRAIPGVEVRIVDDTGAPLPPGEPGEIVIRGYNVMRGYFDNPDATAE 452
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ WL +GDIG D+ GN+ + R+ GG N YP E+EA+LL+H GI + V+
Sbjct: 453 AIDADGWLHSGDIGVQDEAGNIRITDRKKDMFIVGGFNAYPAEIEAMLLEHGGIAQVAVI 512
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + RL E+ +A V R + S+ + + +K PR
Sbjct: 513 GVPDERLGEVGMAFVIPRAGVTVDPAQVIAWSRER-----------------MANYKVPR 555
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREV 447
V PL +TGKI + E+R V
Sbjct: 556 R-VEVVDALPLNATGKIVKYELRDRV 580
>gi|374370611|ref|ZP_09628612.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
gi|373097896|gb|EHP39016.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
Length = 578
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 201/449 (44%), Gaps = 56/449 (12%)
Query: 15 LQHTAIPSLRWHVSLGS-SSSDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICF 72
LQ + +LRW + + + + RD+ + G + L + P + I F
Sbjct: 168 LQAARLLTLRWVIRMEDVPTPGMLTYRDVNARGV--GVEVSELDAISEKLDPHDPINIQF 225
Query: 73 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVG 131
TSGTTG+PKG ++H +I + + E D PL H G+ S + + G
Sbjct: 226 TSGTTGAPKGATLTHRNIINNARFVSMAMNLQEQDRLCIPVPLYHCFGMVMSVLVCTITG 285
Query: 132 ACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
AC +F + F+ + + AV + T+L VP + +A L S++ + G
Sbjct: 286 ACMIFPGEAFDPVATMAAVSEERCTALHGVPTMF--IAQLDHPAFATYDFSSLRTGIMAG 343
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P E+MK ++ AYGMTETS P +F + T +
Sbjct: 344 APCPIEVMKRVVADMHMTEITIAYGMTETS-------------------PVSFQSATDDP 384
Query: 251 VHQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWD-QFLAKPSVST 304
+ + + VG+ PH+E KV +DG G + TRG VML YWD + + S+
Sbjct: 385 LDK-RVATVGRVQPHLECKVVDTDGQIVPVGATGELCTRGYSVMLGYWDDETRTRESIRD 443
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
G W+ TGD+ +ID G +VGR + GGENVYP EVE L +HP + + V G+
Sbjct: 444 G--WMHTGDLATIDTEGYCNIVGRVKDMLIRGGENVYPREVEEFLFRHPKVQSVQVFGVP 501
Query: 365 NARLTEMVVACVRLRESWQWSESN-CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E + A V L++ +E CD CR++ + +K PR +
Sbjct: 502 DPKYGEEICAWVVLKQGQGATEEEICD-----------------FCRDQ-IAHYKIPR-Y 542
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ + P+T TGK+++ +R + L
Sbjct: 543 IRFVNEMPMTITGKVQKFVMRESMTRELN 571
>gi|377560199|ref|ZP_09789718.1| putative fatty-acid--CoA ligase [Gordonia otitidis NBRC 100426]
gi|377522649|dbj|GAB34883.1| putative fatty-acid--CoA ligase [Gordonia otitidis NBRC 100426]
Length = 498
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 180/402 (44%), Gaps = 61/402 (15%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA------IVGYGEDDVYLHTAPLCH 117
PE + + +T GTTG PK V+++ + LA++A + G D V LH AP+ H
Sbjct: 144 PEAPLRLAYTGGTTGKPKAVILTTRS----ELAEVANFLVDLLPNLGPDSVMLHAAPITH 199
Query: 118 IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 177
G + + L+ G V + +F + ++A ++ TS VP + +A LI
Sbjct: 200 -GSGAFFLPHLVKGGSSVILDRFTPQGFVDAAVEYGATSTFMVPTM---IAMLIEDAVID 255
Query: 178 KGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG 237
+ R + ++ GG + L++ + YG E ++T + P TP
Sbjct: 256 RDRLGLTRLCYGGAPIAPALLRRGIDKLGPV-FAQLYGQAEAPLAITCLQ---PHEHTPE 311
Query: 238 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV-CSDGSS----HVGRILTRGAHVMLRY 292
+L A GK VE+ + + G+S G + TRG H M Y
Sbjct: 312 RLASA-----------------GKAYTFVEVDIRDAQGNSLPAGAAGEVCTRGPHTMSGY 354
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
W + A + WL TGDIG +DD G ++L+ RR+ I SGG NVYP EVE VLL H
Sbjct: 355 WQRPEATAETVGADGWLRTGDIGQLDDDGYLYLLDRRHDVIISGGFNVYPREVEDVLLTH 414
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P + VVG+ + R + V A V +RE ++ + + HC
Sbjct: 415 PAVREAAVVGVDDERWGQRVSAAVVVRED------------------VTEQEIVDHC-ST 455
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
L GFK PR W + P +S GK R V RE M+H K +
Sbjct: 456 QLAGFKRPRHIEFWDE-LPKSSVGKSLRRTV-REAMAHHKEV 495
>gi|170740558|ref|YP_001769213.1| AMP-binding domain-containing protein [Methylobacterium sp. 4-46]
gi|168194832|gb|ACA16779.1| AMP-dependent synthetase and ligase [Methylobacterium sp. 4-46]
Length = 565
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 178/392 (45%), Gaps = 49/392 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MA 126
V I FTSGTTGSPKGV +SH ++ + G +D PL H G+ +A
Sbjct: 207 VNIQFTSGTTGSPKGVTLSHHNILNNGSFVGRAMRLGPEDRICIPVPLYHCFGMVMGNLA 266
Query: 127 MLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ GA V+ + F+ + L AVE T+L VP + LA L ++ S++
Sbjct: 267 AVTSGAAMVYPGEGFDPLATLRAVEAERCTALYGVPTMF--LAQLDHLEFARFDLSSLRT 324
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P +M+ A + +L YGMTETS ++F + D LE
Sbjct: 325 GIMAGSPCPIAVMQRAVDRMHLRELTICYGMTETSP-VSFQSAVDDPLER---------- 373
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAK 299
+ VG+ PH E+K+ D + G + TRG VM YWD
Sbjct: 374 ---------RVSTVGRIHPHTEVKIV-DAEGRIVPRGTPGELCTRGYSVMRGYWDDPEKT 423
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
V W+ TGD+ ++DD G +VGR + GGENVYP EVE L +HP I +
Sbjct: 424 AEVRDAAGWMHTGDLATLDDQGFCNIVGRIKDLVIRGGENVYPREVEEFLYRHPAIQEVQ 483
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V G+ + R E + A V+LR L++E LR HC + K
Sbjct: 484 VFGVPDPRYGEELCAWVKLRPG----------------ATLTAEELRAHC-GGQIAHQKI 526
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
PR +V + FP+T TGK+++ +R ++ L
Sbjct: 527 PR-YVEFVDAFPMTVTGKMQKYLMREAMIERL 557
>gi|114047851|ref|YP_738401.1| AMP-binding domain protein [Shewanella sp. MR-7]
gi|113889293|gb|ABI43344.1| AMP-dependent synthetase and ligase [Shewanella sp. MR-7]
Length = 570
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 195/445 (43%), Gaps = 47/445 (10%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
+LQ A+P L + + +G+ S + D L ++ S +P A+ I FT
Sbjct: 160 QLQAKALPELEFVIRMGTEKSLGMLNFDDLLLEVTPDDKAALDRIAESLSPYDAINIQFT 219
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGA 132
SGTTGSPKG +SH ++ + + +D PL H G+ + L GA
Sbjct: 220 SGTTGSPKGATLSHHNILNNGYLVAEAMKFTCNDKLCIPVPLYHCFGMVLGNLVCLAKGA 279
Query: 133 CHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
VF F+ + LE +E+ T+L VP + +A L + S++ + G
Sbjct: 280 AAVFPGDSFDPLTTLEVIERERCTALHGVPTMF--IAELEHPEFKRFDLSSLRTGVMAGA 337
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P E+M+ N +++ YG TE S L +T D +E
Sbjct: 338 TCPEEVMRRVQNLMYMQEVLIGYGQTE-CSPLNHITEIDSPVEK---------------- 380
Query: 252 HQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGE 306
+ + VG+ PH E+K+ + + G + +RG +M YW+ + E
Sbjct: 381 ---RVLTVGRALPHTEVKIVDEFGEVLPINTPGEVCSRGYCIMQCYWNDPEKTAATIDSE 437
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
WL +GDIG +D+ G V +VGR I GGEN+YP E+E L H + V G+ +
Sbjct: 438 GWLHSGDIGQMDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVHSD 497
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E V A +++R SE E +R EK FK PR ++ +
Sbjct: 498 KYGEEVCAWIKVRSGATISE----------------EDIRHFLTEK-FAYFKVPR-YIKF 539
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHL 451
+ +P+T TGKI++ ++R + L
Sbjct: 540 VEQYPMTVTGKIQKFKMRELMYQEL 564
>gi|397728936|ref|ZP_10495726.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396935221|gb|EJJ02341.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 510
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 181/395 (45%), Gaps = 47/395 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ I+ FTSGTT +PKGVV+ HS L+ + + E D L + P H+ G+ +
Sbjct: 142 PDEPAIVLFTSGTTSAPKGVVLRHSHLLSYVMGTVEFASAEETDGALISVPPYHVAGMGT 201
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 181
+ G +++P+F++ +E TS + VP + L R+ G D
Sbjct: 202 ILTNFYAGRKMIYLPQFDAADWVELARTARATSAMVVPTM------LDRIVDHLGGSDAD 255
Query: 182 --SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
+++ + GG +P ++ A +FP ++AYG+TETSS++ + D +
Sbjct: 256 VPTLRSLSYGGARMPRPTLEAALRAFPNVGFVNAYGLTETSSTIALLGPEDHRAALESED 315
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWD 294
P + +G+P P +E+++ V G + RG V
Sbjct: 316 PAVRARLG----------SIGRPVPGIEVEIRDAYDKPVAQGDEGELWVRGPQVS----G 361
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
+++ SV + W T D+ D G +++VGR + I GGEN+ P E+E VL++HP
Sbjct: 362 EYMGNGSVLDADGWFPTRDLAFEDVEGFLFVVGRNDDTIIRGGENIAPAEIEDVLVEHPR 421
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ +VVVGI + + +VA V K + +E LRQ R + L
Sbjct: 422 VRSVVVVGIPDDHWGQAIVATV------------VPVPGKVPD----AEELRQFVRAR-L 464
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 449
G + P V +R P T TGKI R ++ E+++
Sbjct: 465 RGSRTPDRIV-YRSELPTTLTGKILRKDIVAEIVA 498
>gi|399077646|ref|ZP_10752496.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Caulobacter
sp. AP07]
gi|398035027|gb|EJL28280.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Caulobacter
sp. AP07]
Length = 530
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 177/389 (45%), Gaps = 55/389 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALIV-QSLAKIAIVGY---GEDDVYLHTAPLCHIGGLSSA 124
I +TSGTTG PKG +++H+ ++ + LA +A + + G DDV L P+ HIGG
Sbjct: 172 IQLYTSGTTGRPKGAMLTHNNILAPRRLAAVADLDWNRWGPDDVSLVAMPVAHIGGTGWG 231
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ L+ GA V +F+ L+ +E+ V+ + VPA + + L R ++ R +
Sbjct: 232 VVGLVNGAKGVVAREFDPTRVLDFIERDRVSKMFMVPAALQIVVRLPRARQVDYSR--LT 289
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
IL G +P +L++E F + YGMTET+ ++ ++
Sbjct: 290 YILYGAAPIPLDLLRECLEVF-GCGFVQQYGMTETTGTVVYL------------------ 330
Query: 245 NVTPNSVHQPQGVC----VGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQ 295
P H P G G P P VELKV DG S VG + R M YW
Sbjct: 331 ---PPQDHDPAGNARMRSAGLPMPGVELKVLGPDGESLPAGEVGEVAIRSPANMAGYWKL 387
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
A + WL TGD G +D G +++ R I SGGEN+YP EVE+ + HP +
Sbjct: 388 PEATAETIAEDGWLRTGDAGYLDADGYLFIHDRVKDMIISGGENIYPAEVESAVYGHPHV 447
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ V+G+ + E V A V L+ ++ ++ + +
Sbjct: 448 AEVAVIGVPDDTWGEAVKAVVALKPGAPVDPADIIAFARTR-----------------IA 490
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
FKAP+ + + + P ++GKI R E+R
Sbjct: 491 AFKAPKT-IDFVEALPRNASGKILRRELR 518
>gi|262376316|ref|ZP_06069546.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter lwoffii SH145]
gi|262308917|gb|EEY90050.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter lwoffii SH145]
Length = 562
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 181/383 (47%), Gaps = 47/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAML 128
I FTSGTTG+PKG +++H+ ++ + G +D + PL H G+ +A +
Sbjct: 208 IQFTSGTTGNPKGTMLTHNNILNNGYFVGEAIHLGPEDRVCISVPLFHCFGMVMGNLACI 267
Query: 129 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+ ++ F L+A++Q T+ VP + +A L + S++ +
Sbjct: 268 THGSAMIYPSAVFNPLETLKAIQQERCTAAYGVPTMF--IAVLEHEQFDEFDLSSLRTGI 325
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ +++ YGMTET+ P + + T
Sbjct: 326 MAGSPCPQEIMQRVIERMHMSEITICYGMTETA-------------------PVSAQSST 366
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSV 302
+SV Q VG+ PH+E+K+ + +G + RG VML YW+ V
Sbjct: 367 ADSVEQRVST-VGRVHPHLEVKIVDENGKVVPRGQLGELCVRGYSVMLGYWEDQDKTQEV 425
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
W+ TGDI +DD G V + GR + GGEN++P+E+E L HP + + V+G
Sbjct: 426 IDAARWMHTGDIAEMDDEGFVKIKGRIKDVVIRGGENLFPKEIEDFLYTHPAVSDVQVIG 485
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + + E + AC+ L E+ +E E +RQ+C+E +++ K PR
Sbjct: 486 VPDHKYGEELCACIILHENDPCTE----------------ETIRQYCKE-HISHNKVPR- 527
Query: 423 FVLWRKPFPLTSTGKIRRDEVRR 445
+V + + FP+T++GK ++ ++R
Sbjct: 528 YVRFFQEFPMTASGKAQKFKLRE 550
>gi|359777990|ref|ZP_09281264.1| putative fatty-acid--CoA ligase [Arthrobacter globiformis NBRC
12137]
gi|359304844|dbj|GAB15093.1| putative fatty-acid--CoA ligase [Arthrobacter globiformis NBRC
12137]
Length = 557
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 206/473 (43%), Gaps = 62/473 (13%)
Query: 1 MLVT---DESSDSWYLELQHTA-IPSLRWHVSL------GSSSSDFVNKRDMLTADILK- 49
MLVT D +SD + Q A P LR V L G + V ++++ A++LK
Sbjct: 123 MLVTAPSDRNSDYVGMARQALAGCPDLRELVFLPDFDMEGLDAGVPVGEQELTYAELLKQ 182
Query: 50 ----GYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE 105
G+S P + + +TSGTTG PKG ++H ++ + ++ Y E
Sbjct: 183 ADAVGHSELKARMA-GLDPHDPINLQYTSGTTGFPKGATLTHHNILNNGYSIGELLNYTE 241
Query: 106 DDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAI 163
D + P H G+ + IP F +ALEAV+ T+L VP +
Sbjct: 242 HDRVVIPVPFYHCFGMVIGNLNALSHGAATIIPGRGFTPAAALEAVQDFGGTALYGVPTM 301
Query: 164 MADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSL 223
+A L +++ + G P E+M + + YGMTETS
Sbjct: 302 F--IAELALPDFASYDLSTLRTGVMAGSLCPIEVMNRVISEMNMKDVAICYGMTETSPVS 359
Query: 224 TFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV----- 278
T MT TL+ H+ + VG+ P +E K+ V
Sbjct: 360 T-MTRGGDTLQ-----------------HRTE--TVGRTMPRLESKIVDLAGEVVERGVI 399
Query: 279 GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGE 338
G + TRG VM YW+Q + W+ TGD+ +DD G V + GR + GGE
Sbjct: 400 GELCTRGYAVMQGYWNQPDKTAEAIDADGWMHTGDLARMDDDGYVVIEGRMKDMVIRGGE 459
Query: 339 NVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKEL 398
N+YP E+E L HP I + V+G+ +AR E ++AC+ L+ +
Sbjct: 460 NIYPREIEEFLYTHPSIQDVQVIGVPDARYGEELMACIILKPGAEP-------------- 505
Query: 399 LLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
L + + + CR K L +K PR +V R FP+T +GK+R+ E+R E ++ L
Sbjct: 506 -LDAAAVAEFCRGK-LAHYKVPR-YVDVRDSFPMTVSGKVRKVEMREEAVARL 555
>gi|145222972|ref|YP_001133650.1| AMP-dependent synthetase and ligase [Mycobacterium gilvum PYR-GCK]
gi|315443434|ref|YP_004076313.1| acyl-CoA synthetase [Mycobacterium gilvum Spyr1]
gi|145215458|gb|ABP44862.1| AMP-dependent synthetase and ligase [Mycobacterium gilvum PYR-GCK]
gi|315261737|gb|ADT98478.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
gilvum Spyr1]
Length = 502
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 184/401 (45%), Gaps = 43/401 (10%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 116
P P+ ++ FTSGTT PK V ++H+ L + + DD L P
Sbjct: 130 PAAEFADPDSVGVVLFTSGTTSKPKAVELTHTNLTSYIMGTVEFASAEPDDAALICVPPY 189
Query: 117 HIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
HI G+S+A++ L G V++ F+++ + V VTS VP ++ + T++ T
Sbjct: 190 HIAGVSAALSNLYAGRKMVYLRHFDAEKWVRLVADEGVTSATVVPTMLDRIVTVLETTDT 249
Query: 177 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
+++ + GG +P L+++A + P ++AYG+TETSS++ +T
Sbjct: 250 --ALPTLRTLAYGGSKVPLPLVRKALSLLPDVGFVNAYGLTETSSTIAVLT--------- 298
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLR 291
+ + VG+P P +E++V ++ G G + RG V +
Sbjct: 299 -PDDHRAALAAADDAALRRLGSVGQPVPGIEVEVRAEDGTVLGPGETGELFVRGEQVSGK 357
Query: 292 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
Y D SV W T D+ +D G +++ GR + I GGEN+ P E+E VL++
Sbjct: 358 YTDIG----SVLDENGWFPTKDVAYLDSEGYLFIGGRSDDTIIRGGENIAPAEIEDVLVE 413
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
HP + VVG + + +++VA V +++ E LR H R
Sbjct: 414 HPHVRDCAVVGADDPQWGQIIVAVV----------------VPHQDTAPDPEDLRAHVRS 457
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ L G + P V++R P +TGK+ +RRE++S L
Sbjct: 458 Q-LRGSRTPDR-VVFRDELPTNATGKV----LRRELVSELN 492
>gi|430806585|ref|ZP_19433700.1| AMP-binding domain protein [Cupriavidus sp. HMR-1]
gi|429501182|gb|EKZ99525.1| AMP-binding domain protein [Cupriavidus sp. HMR-1]
Length = 570
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 187/394 (47%), Gaps = 50/394 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAML 128
I FTSGTTG+PKG ++H ++ + + + E D P H G+ +A +
Sbjct: 216 IQFTSGTTGAPKGATLTHRNIVNNGRSIAGAMRFSEQDKLCIPVPFYHCFGMVLGVLACV 275
Query: 129 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA VF + F + + AV + T+L VP + +A L + S++ +
Sbjct: 276 STGASMVFPGEAFHPGATMAAVSEERCTALHGVPTMF--IAQLDDPDFSKYDFSSLRTGI 333
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK A++ AYGMTETS P +F + T
Sbjct: 334 MAGAPCPVEVMKRVMADMHLAEITIAYGMTETS-------------------PVSFQSAT 374
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWD-QFLAKPS 301
+ + + + VG+ PH+E KV DG + G + TRG VML YWD + + +
Sbjct: 375 DDPIDK-RVSTVGRVQPHLECKVVDVDGQTLPIGATGELCTRGYSVMLGYWDDEERTREA 433
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ G W+ TGD+ +ID+ G +VGR + GGENVYP E+E L +HP + + V
Sbjct: 434 IRDG--WMHTGDLATIDEEGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQSVQVF 491
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E V A + L+ QS+ ++E +R +CR++ + +K PR
Sbjct: 492 GVPDEKYGEEVCAWIVLKPG---------QSATDEE-------IRNYCRDQ-IAHYKIPR 534
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLP 455
++ + P+T TGK+++ +R ++ L P
Sbjct: 535 -YIRFVDEMPMTITGKVQKFVMRDQMTQELGISP 567
>gi|406029174|ref|YP_006728065.1| acyl-CoA synthetase family member 2 [Mycobacterium indicus pranii
MTCC 9506]
gi|405127721|gb|AFS12976.1| Acyl-CoA synthetase family member 2 [Mycobacterium indicus pranii
MTCC 9506]
Length = 467
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 169/376 (44%), Gaps = 51/376 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-L 128
I FTSGTTG PKG +++H + + E D YL P H GL + +
Sbjct: 142 IIFTSGTTGRPKGAMLNHGQTLRMYEEWATLADLREGDRYLQINPYFHTFGLKAGLVTSF 201
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ GA + + F+ + +E +E+ +T L P + L ++ K +++ +
Sbjct: 202 LRGATMLPVAVFDIDTVVELIERERITMLPGPPTLYHSLLSVGDKSKL----STLRAAVT 257
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G +P EL++ P L++ YG+TE + TL PG +F +V
Sbjct: 258 GAADIPVELVRRIHGELPFETLMTGYGLTEAGNV---------TLSRPGD---SFEDVAT 305
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 308
+ G P VE+++ DG ++ RG VM Y D A E W
Sbjct: 306 TA---------GLPCDGVEVRIADDGE-----VVVRGYGVMQGYLDDPAATAQAIDAEGW 351
Query: 309 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 368
L TGD+GS DD G + +VGR+ GG N YP E+E LL HP + V+GI + R+
Sbjct: 352 LHTGDLGSFDDAGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGIPDERM 411
Query: 369 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 428
++ A V + +S++ L CR++ + GFK PR V +
Sbjct: 412 GQVGKAFVVRKGE------------------VSADELIGWCRDR-MAGFKVPRA-VQFLD 451
Query: 429 PFPLTSTGKIRRDEVR 444
PL +TGK+ +D++R
Sbjct: 452 SLPLNATGKVMKDQLR 467
>gi|118468470|ref|YP_889139.1| AMP-dependent synthetase/ligase [Mycobacterium smegmatis str. MC2
155]
gi|399989152|ref|YP_006569502.1| AMP-dependent synthetase and ligase [Mycobacterium smegmatis str.
MC2 155]
gi|118169757|gb|ABK70653.1| AMP-dependent synthetase and ligase [Mycobacterium smegmatis str.
MC2 155]
gi|399233714|gb|AFP41207.1| AMP-dependent synthetase and ligase [Mycobacterium smegmatis str.
MC2 155]
Length = 496
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 195/420 (46%), Gaps = 43/420 (10%)
Query: 40 RDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA 99
R +LT++ + + P P+ ++ FTSGTT PK V ++H+ L +
Sbjct: 114 RPVLTSEEFLSQARTADPAAEFADPDAVAVVLFTSGTTSRPKAVELTHNNLTSYITGTVE 173
Query: 100 IVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLIT 159
+D L P HI G+S+AM+ L G V++ F++ +E V VTS
Sbjct: 174 FGSAAPEDAALICVPPYHIAGVSAAMSNLYAGRKMVYLRNFDAHRWVELVRTEGVTSATV 233
Query: 160 VPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTET 219
VP ++ + T + + T +++ + GG + L+++A P ++AYG+TET
Sbjct: 234 VPTMLDRIVTAL--ETTRAELPTLRNLAYGGSKVALPLVRKALELMPNVGFVNAYGLTET 291
Query: 220 SSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----G 274
SS++ + P A + P + VG+ P +E+++ + G
Sbjct: 292 SSTIAVL--------GPDDHRAALASDDPGVTRRLG--SVGQVVPGIEVQIRGEDGTVLG 341
Query: 275 SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIK 334
G + RG V RY + SV + W T D+ +D G +++ GR + I
Sbjct: 342 PGETGELFVRGEQVSGRYTEIG----SVLDEDGWFPTKDVAMLDQDGYLFIGGRSDDTII 397
Query: 335 SGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSK 394
GGEN+ P E+E VL++HP + + VVG + + +++VA V +E + D
Sbjct: 398 RGGENIAPAEIEDVLVEHPDVRDVAVVGPEDPQWGQIIVAVV---VPADGAEPDAD---- 450
Query: 395 NKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
VLR+H R K+L G + P V++R P +TGK+ +RR+++ L+ +
Sbjct: 451 ---------VLREHVR-KHLRGSRTPDR-VVFRAELPTNATGKV----LRRQLVDELQPI 495
>gi|425900342|ref|ZP_18876933.1| long-chain-fatty-acid--CoA ligase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397889460|gb|EJL05942.1| long-chain-fatty-acid--CoA ligase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 564
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 198/448 (44%), Gaps = 51/448 (11%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIIC 71
+LQ +P LR +SL + S F+ + AD+ G S+ +L S P+ AV I
Sbjct: 156 QLQSERLPDLRGVISLDAQPPSGFLPWSQL--ADLGAGVSVEALRERQDSLDPDQAVNIQ 213
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVG 131
+TSGTTG PKG +SH ++ +G G +D + PL H G+ +
Sbjct: 214 YTSGTTGFPKGATLSHYNILNNGYMVGESLGLGHEDRLVIPVPLYHCFGMVMGNLGCVTH 273
Query: 132 ACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
+ P F+ L AV + T L VP + +A L + ++ S++ +
Sbjct: 274 GTTMIYPNDAFDPLLTLGAVAEEKATGLYGVPTMF--IAMLDQPRRAEFDLSSLRTGIMA 331
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P E+M+ + +++ AYGMTETS +L+T P
Sbjct: 332 GATCPIEVMRRVISEMHMSEVQIAYGMTETSPV---------SLQT-----------GPA 371
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVST 304
+ + VG+ P +E K+ + + +G + TRG VML YW+
Sbjct: 372 DELELRVTTVGRTQPQLESKIIDEAGNIVPRGTIGELCTRGYSVMLGYWNNPQGTAEAID 431
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
W+ TGD+ ++++ G V + GR I GGEN+YP E+E HP + + V+GI
Sbjct: 432 QAGWMHTGDLATMNEQGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIP 491
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
++ E +VA ++ SE E L+ C+ + + FK PR F
Sbjct: 492 CSKYGEEIVAWIKFHPGHSASE----------------EELQAWCKAR-IAHFKTPRYFK 534
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ FP+T TGKI++ +R + L+
Sbjct: 535 FVEE-FPMTVTGKIQKFRMREISIEELR 561
>gi|403236357|ref|ZP_10914943.1| AMP-binding domain protein [Bacillus sp. 10403023]
Length = 551
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 211/449 (46%), Gaps = 59/449 (13%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWA---PEGAVII 70
+L +P L+ VS+ S+ + ++ D+L LKG + L + + P I
Sbjct: 142 QLNSERLPMLKRVVSVHFSTPNTISFEDLL----LKGKQVPDLELQNRESQVDPNDLFAI 197
Query: 71 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLM 129
+TSGTTG PKGV+ SH ++ S + D + L PL H+ + A +
Sbjct: 198 FYTSGTTGFPKGVMHSHKMIVNMSNVAERLEMKNTDKILLFL-PLFHVYASQVGLTAACI 256
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI--- 186
GAC V + FE K A++ +++ V+ + A+ D+ + +++++ +
Sbjct: 257 KGACIVLMDSFEPKKAIQLIKEEKVSIMYGFDAMYLDM-----MNHPDYNQEAIQTLRVC 311
Query: 187 -LNGGGGLPSELMKEATNSFPKAKLISAYGMTETS--SSLTFMTLYDPTLETPGQLPQAF 243
+G G+ L K N+F K+I++YGMTE++ +SLTF+ T+ + P A
Sbjct: 312 MCSGTRGI---LEKVVQNNF---KVINSYGMTESTGVTSLTFLEDSKETIISTNGFPLA- 364
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 303
G+ V P + V + G I +G VML Y+ + V
Sbjct: 365 ------------GLSVNIVDPQTKQAV---STGEYGEICVKGHSVMLGYYKKPEETKEVL 409
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
T + WL TGD G ID+ G + L GR I+ GGENV P EV+AVL+ HP + V
Sbjct: 410 TEDGWLYTGDKGYIDESGYLHLSGRIKDIIRVGGENVDPLEVDAVLISHPDVFKAYTVAA 469
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ RLTE+ A V+L N ++ E L +C+ K + FK P+ +
Sbjct: 470 PDERLTEVCAAFVQLH---------------NHVADINEEDLIAYCKTK-IASFKVPK-Y 512
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ + FP+T+TGK++R +++ + L+
Sbjct: 513 LFITESFPMTTTGKVQRFALKQTALKRLE 541
>gi|159045943|ref|YP_001534737.1| acyl-CoA synthetase [Dinoroseobacter shibae DFL 12]
gi|157913703|gb|ABV95136.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Dinoroseobacter shibae DFL 12]
Length = 579
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 182/389 (46%), Gaps = 47/389 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I FTSGTTG PKG ++H ++ + + + + E D+ P H G + + +
Sbjct: 223 IQFTSGTTGLPKGATLTHRNIVNNAASVTSAIKLIEQDMLCIPVPFYHCFGMVMGTLGCV 282
Query: 129 MVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA V P F+ + L+ V +H T+L VP + + R + S++ +
Sbjct: 283 TKGAAIVVPGPGFDPITTLDTVSKHRCTALYGVPTMFVGMLEHPRFAE--YDLSSLRTGI 340
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M++ + +++ AYGMTETS P +F + T
Sbjct: 341 MAGAPCPIEIMRQVQSRMHMSEVTIAYGMTETS-------------------PVSFQSAT 381
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 302
+ V Q + VG+ PHVE+K+ + S V G +LTRG VM YWD+
Sbjct: 382 DDPV-QKRVSSVGRIQPHVEVKIVDEDSVVVPVGAQGELLTRGYSVMQGYWDEPDKTAEA 440
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ W+ TGD+ ++D G + GR I GGENVYP E+E L HP I + V G
Sbjct: 441 IDADGWMHTGDLATLDVDGFCKITGRVKDMIVRGGENVYPREIEEFLYTHPAISQVQVFG 500
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + + E+VVA W ++ D + +E+L CR+ ++ FK P +
Sbjct: 501 IPDQKFGEIVVA-------WLVAKPGADPT--------EAEIL-DFCRD-SIAHFKVPAM 543
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
V ++ P+T TGK ++ +R +++ L
Sbjct: 544 -VRFKNSLPMTVTGKPQKFIMRAQMVEEL 571
>gi|333023626|ref|ZP_08451690.1| putative AMP-binding domain protein [Streptomyces sp. Tu6071]
gi|332743478|gb|EGJ73919.1| putative AMP-binding domain protein [Streptomyces sp. Tu6071]
Length = 544
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 175/382 (45%), Gaps = 49/382 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMV 130
+TSGTTG PKG +SH L+ +GY D P H G+ +
Sbjct: 195 YTSGTTGFPKGATLSHHNLLNNGFWVGETIGYTPRDRVCLPVPFFHCFGMVMGNLGATSH 254
Query: 131 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GAC V P FE+++ LEAVE+ T+L VP + +A L S++ +
Sbjct: 255 GACIVIPAPSFEARATLEAVEKERCTALYGVPTMF--IAELNLPDFGSFDLTSLRTGIMA 312
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 313 GSPCPVEVMKRVVAEMHMAEVSICYGMTETSP-VSCQTRADDDLE--------------- 356
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 303
H+ VG+ PH+E+KV S G + TRG VML YW+ V
Sbjct: 357 --HRTG--TVGRVLPHLEVKVVDPVSGVTVPRGTQGELCTRGYSVMLGYWEDPERTAEVV 412
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
W+ TGD+ + + G V + GR I GGEN+YP E+E L HP I + VVG+
Sbjct: 413 DPGRWMHTGDLALMREDGYVEIAGRIKDMIIRGGENIYPREIEEFLYTHPKISDVQVVGV 472
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RL 422
+AR E V+ACV R+ D + ++ +R CR++ L +K P R+
Sbjct: 473 PDARYGESVLACVIPRDP-------ADAPTLDE--------IRAFCRDR-LASYKIPSRV 516
Query: 423 FVLWRKPFPLTSTGKIRRDEVR 444
VL FP+T +GK+R+ E+R
Sbjct: 517 EVL--GTFPMTVSGKVRKIELR 536
>gi|304317081|ref|YP_003852226.1| AMP-dependent synthetase and ligase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778583|gb|ADL69142.1| AMP-dependent synthetase and ligase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 563
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 182/393 (46%), Gaps = 35/393 (8%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIG 119
+S P+ + I +TSGTT PKG +++H L+ A + + E+D T PL H
Sbjct: 202 NSLKPDEVIDIQYTSGTTDFPKGAMLTHYGLLNNGDAIATRMKFTENDKLCITVPLFHCF 261
Query: 120 GLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
G + S MA L GA V + F +EA+++ T+ VP + + K
Sbjct: 262 GYTLSVMACLSKGATMVLVDHFNPVKVMEAIDKEKCTAFNGVPTMFITMLNHQDFDKF-- 319
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
+++ + G P ++M+ + ++ S YG+TE S +T T D +LE
Sbjct: 320 DFSTLRTGIMAGSVCPKKVMEAVVDKMNMREITSVYGLTEASPGIT-QTSVDDSLE---D 375
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA 298
G V P GV + P LK GS G I+ RG +VM Y+
Sbjct: 376 RVSTVGYVFP-------GVDIKIVDPKT-LKEVPIGSE--GEIMARGYNVMKGYYKMKEE 425
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ WL TGDIG +DD G + + GR I GGEN+ P E+E L HPG+ +
Sbjct: 426 TEKAIEKDGWLHTGDIGKLDDRGYLKITGRLKDMIIRGGENISPTEIEECLYHHPGVKDV 485
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
+VG+ + + E ++A + +E + C + +E +R++ R+K L FK
Sbjct: 486 QIVGVPDEKYGEEIMAYIIPKEGY------C----------IEAEDIREYARKK-LARFK 528
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
P+ +V FP T++GKI++ +R M+ L
Sbjct: 529 VPK-YVKIIDEFPKTASGKIQKYRLREMAMAEL 560
>gi|358455929|ref|ZP_09166154.1| o-succinylbenzoate--CoA ligase [Frankia sp. CN3]
gi|357080580|gb|EHI90014.1| o-succinylbenzoate--CoA ligase [Frankia sp. CN3]
Length = 501
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 166/376 (44%), Gaps = 49/376 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AML 128
I FTSGTTG PKGV ++H + E D YL P H G + + A L
Sbjct: 174 IIFTSGTTGRPKGVTMNHRQTLRLYSEWCYQADLREGDRYLIVNPFFHTFGYKAGLVASL 233
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ GA + + F+ E VE+ +T L P I L S++ +
Sbjct: 234 IRGATILPLAVFDVDKVGELVEREKITMLPGAPTIYHSLLE----AGGKHDLSSLRCAVT 289
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G +P EL++ P +++ YG+TE ++ T PG +F ++
Sbjct: 290 GSADIPVELIRRMKAELPFQHIMTGYGLTEAGTA---------TASRPGD---SFESIA- 336
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 308
VG P +E+ V DG +L RG VM Y+D LA + W
Sbjct: 337 --------TTVGAPCDGIEVAVAGDGE-----VLIRGYSVMQGYFDDPLATAETVDADGW 383
Query: 309 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 368
L TGD+GS+D+ G + +VGR+ GG N YP E+E LL+HP + V+G+ +ARL
Sbjct: 384 LHTGDLGSLDERGYLKIVGRKKDMFIVGGFNAYPAEIEGYLLEHPAVAQAAVIGVPDARL 443
Query: 369 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 428
E+ A + R + + SK + + GFKAPR FV +
Sbjct: 444 GEVCKAFIVRRAGAEVTAEEVMSWSKER-----------------MAGFKAPR-FVEFLD 485
Query: 429 PFPLTSTGKIRRDEVR 444
PL +TGK+ +D++R
Sbjct: 486 ALPLNATGKVMKDQLR 501
>gi|406596826|ref|YP_006747956.1| AMP-binding protein [Alteromonas macleodii ATCC 27126]
gi|406598074|ref|YP_006749204.1| AMP-binding protein [Alteromonas macleodii ATCC 27126]
gi|406374147|gb|AFS37402.1| AMP-binding domain protein [Alteromonas macleodii ATCC 27126]
gi|406375395|gb|AFS38650.1| AMP-binding domain protein [Alteromonas macleodii ATCC 27126]
Length = 579
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 195/445 (43%), Gaps = 47/445 (10%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 74
L + +PSL++ ++G + + L + + + + + + I FTS
Sbjct: 167 LTLSKLPSLKYVYTIGDKPVEGLQAFSALQIEPTEALKSQLEAVESNLSANDNINIQFTS 226
Query: 75 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGAC 133
GTTG+PKG ++H ++ L + + D PL H G+ + L GAC
Sbjct: 227 GTTGNPKGATLTHRNILNNGLLVSQAMRFTHKDKLCIPVPLYHCFGMVLGNLVCLASGAC 286
Query: 134 HVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
VF + F+ ++ L VE+ T L VP + L K +++ + G
Sbjct: 287 AVFPGESFDPETTLRTVEEEKCTGLHGVPTMFIAELELSNFKSF--DLSTLRTGVMAGST 344
Query: 193 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 252
P ELM++ + F +++ YG TE S + +T D E
Sbjct: 345 CPEELMRKVHSEFHMTEVVIGYGQTE-CSPINHITDIDSPFEK----------------- 386
Query: 253 QPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
Q VG+ PH E+K+ + V G I RG VM YW + + E
Sbjct: 387 --QVKTVGRAMPHTEVKIIDPQGNTVPIGEPGEICARGYCVMKGYWGDEVKTKATIDDEG 444
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
WL +GD+G +D+ G V +VGR I GGEN+YP E+E VL QH + V GI + +
Sbjct: 445 WLHSGDLGEMDEEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHADVSDAAVFGIPDNK 504
Query: 368 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 427
E V ++ +E+ E DQ +R + + K L FK P+ ++
Sbjct: 505 YGEQVCLWIKEKENRHIDE---DQ-------------IRDYLKSK-LAYFKVPK-YISVV 546
Query: 428 KPFPLTSTGKIRRDEVRREVMSHLK 452
K +P+T TGK+++ ++R ++ LK
Sbjct: 547 KEYPMTVTGKLQKFKMREYMIETLK 571
>gi|432343682|ref|ZP_19592828.1| acid--CoA ligase [Rhodococcus wratislaviensis IFP 2016]
gi|430771284|gb|ELB87166.1| acid--CoA ligase [Rhodococcus wratislaviensis IFP 2016]
Length = 510
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 183/395 (46%), Gaps = 47/395 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ I+ FTSGTT +PKGVV+ HS L+ + + E D L + P H+ G+ +
Sbjct: 142 PDAPAIVLFTSGTTSAPKGVVLRHSHLLSYVMGTVEFASAEETDGALISVPPYHVAGMGT 201
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 181
+ + G +++P+F++ +E TS + VP + L R+ G D
Sbjct: 202 IVTNIYAGRKMIYLPQFDAADWVELARTAKATSAMVVPTM------LDRIVDHLGGSDAD 255
Query: 182 --SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
+++ + GG +P ++ A +FP ++AYG+TETSS++ + D +
Sbjct: 256 VPTLRSLSYGGARMPRPTLEAALRAFPNVGFVNAYGLTETSSTIALLGPEDHRAALESED 315
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWD 294
P + +G+P P +E+++ V G + RG V
Sbjct: 316 PAVRARLG----------SIGRPVPGIEVEIRDAYDRPVAPGDEGELWVRGPQVS----G 361
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
+++ SV + W T D+ D G +++VGR + I G EN+ P E+E VL++HP
Sbjct: 362 EYMGSGSVLDADGWFPTRDLAFEDVEGFLFVVGRNDDTIIRGSENIAPAEIEDVLVEHPR 421
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ +VVVGI + + +VA V + E + + +E LRQ R + L
Sbjct: 422 VRSVVVVGIPDDHWGQAIVATV-VPEPGEVPD---------------AEELRQFVRAR-L 464
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 449
G + P V +R P T TGKI R ++ E+++
Sbjct: 465 RGSRTPDRIV-YRNELPTTLTGKILRKDIVAEIVA 498
>gi|379745564|ref|YP_005336385.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
ATCC 13950]
gi|379752849|ref|YP_005341521.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
MOTT-02]
gi|378797928|gb|AFC42064.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
ATCC 13950]
gi|378803065|gb|AFC47200.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
MOTT-02]
Length = 467
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 169/376 (44%), Gaps = 51/376 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-L 128
I FTSGTTG PKG +++H + + E D YL P H GL + +
Sbjct: 142 IIFTSGTTGRPKGAMLNHGQTLRMYEEWATLADLREGDRYLQINPYFHTFGLKAGLVTSF 201
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ GA + + F+ + +E +E+ +T L P + L ++ K +++ +
Sbjct: 202 LRGATMLPVAVFDIDTVVELIERERITMLPGPPTLYHSLLSVGDKSKL----STLRAAVT 257
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G +P EL++ P L++ YG+TE + TL PG +F +V
Sbjct: 258 GAADIPVELVRRIHGELPFETLMTGYGLTEAGNV---------TLSRPGD---SFEDVAT 305
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 308
+ G P VE+++ DG ++ RG VM Y D A E W
Sbjct: 306 TA---------GLPCDGVEVRIADDGE-----VVVRGYGVMQGYLDDPAATAQAIDAEGW 351
Query: 309 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 368
L TGD+GS DD G + +VGR+ GG N YP E+E LL HP + V+GI + R+
Sbjct: 352 LHTGDLGSFDDAGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGIPDERM 411
Query: 369 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 428
++ A V + +S++ L CR++ + GFK PR V +
Sbjct: 412 GQVGKAFVVRKGE------------------VSADELIGWCRDR-MAGFKVPRA-VQFLD 451
Query: 429 PFPLTSTGKIRRDEVR 444
PL +TGK+ +D++R
Sbjct: 452 SLPLNATGKVMKDQLR 467
>gi|334346140|ref|YP_004554692.1| long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
gi|334102762|gb|AEG50186.1| Long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
Length = 561
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 175/400 (43%), Gaps = 50/400 (12%)
Query: 59 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI 118
TH+ P + I FTSGTTG PK +SH + A + G G D PL H
Sbjct: 198 THASDP---INIQFTSGTTGLPKAATLSHRNITNNGFAVGSAAGIGAGDRVCIPVPLYHC 254
Query: 119 GGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
G+ + + P F++ + L AVE L VP + +A L +
Sbjct: 255 FGMVMGNLACLAHQATMVYPSAAFDAGAVLSAVENERCGFLYGVPTMF--IAALSHPEFA 312
Query: 177 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
+++ + G P E+M+E A + AYGMTETS ++F + T+E
Sbjct: 313 RFDLSTLRGGIMAGSPCPVEIMRETIERMHMAGITIAYGMTETSP-VSFQSDMGDTIER- 370
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLR 291
VT VG+ PH+E K+ + V G + TRG VM+
Sbjct: 371 --------RVT----------TVGRIQPHLESKIIDEAGEIVPRGQPGELCTRGYSVMIG 412
Query: 292 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
YW + E W+ +GD+ +DD G +VGR I GGENVYP E+E L
Sbjct: 413 YWGDPEQTAAAIDSEGWMHSGDLAVLDDEGYCKIVGRSKDMIIRGGENVYPREIEEFLHT 472
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
HP + + V+G+ + R E V A +R E SE E LR CR
Sbjct: 473 HPAVQDVQVIGVPDDRYGEEVCAWIRCHEGAALSE----------------EELRIFCRG 516
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ + +K PR ++ + + FP+T TGKI++ +R ++ L
Sbjct: 517 R-IAHYKVPR-YIRFVRDFPMTVTGKIQKFAMRDAMVEEL 554
>gi|441519811|ref|ZP_21001483.1| putative fatty-acid--CoA ligase [Gordonia sihwensis NBRC 108236]
gi|441460564|dbj|GAC59444.1| putative fatty-acid--CoA ligase [Gordonia sihwensis NBRC 108236]
Length = 550
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 183/399 (45%), Gaps = 48/399 (12%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ + I +TSGTTG+PKGV ++H + +++ Y + D P H G+
Sbjct: 185 PDDPINIQYTSGTTGAPKGVTLTHLNIGNNGYLVGSLLEYTQHDRICLPVPFYHCFGMVM 244
Query: 124 AMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGR 180
+ C + IP F+ K+ L AVE++ TSL VP + +A+LA L
Sbjct: 245 GNLAAIAFGCAMVIPAPAFDPKATLAAVEKYRCTSLYGVPTMFIAELALLDSSADEGTTF 304
Query: 181 D--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
D S++ + G P ++M+ + +++ YGMTETS T + D
Sbjct: 305 DLSSLRTGIMAGSPCPEQVMRRVIDEMNMSQVSICYGMTETSPVSTQTRMDD-------D 357
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRY 292
L G V G+ PH+E+K+ + G TRG VM Y
Sbjct: 358 LDLRVGTV-------------GRVGPHLEIKIADPLTGETLPRGETGEFRTRGYSVMKGY 404
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
W+ V + W+ TGD+G + D G V + GR + GGEN+YP E+E L H
Sbjct: 405 WNDPEKTAEVLDADGWMATGDLGVMADNGYVRITGRIKDMVIRGGENIYPREIEEFLYTH 464
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P II V+G+ + + E ++A +R+RE D+ L+++ +R+
Sbjct: 465 PDIIDAQVIGVPDEKYGEELMAWIRVRE-------GADE--------LTADSIREFA-TG 508
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+++ K P+ +V FP+T TGK+R+ E+R + L
Sbjct: 509 HISRHKIPK-YVQIVDEFPMTVTGKVRKVEMRERAIEVL 546
>gi|410452975|ref|ZP_11306937.1| AMP-dependent synthetase and ligase [Bacillus bataviensis LMG
21833]
gi|409933720|gb|EKN70640.1| AMP-dependent synthetase and ligase [Bacillus bataviensis LMG
21833]
Length = 516
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 183/395 (46%), Gaps = 52/395 (13%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYG--EDDVYLHTAPLCHIGGLS 122
+ ++I FTSG+TG PKG VI+H + S+ K I +G D L P H+GGL+
Sbjct: 165 DDPLLIIFTSGSTGKPKGAVITHKNIF--SICKTTIHSWGITNQDRMLINLPNSHVGGLT 222
Query: 123 SAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+++ + L+ GA V +P F + L ++++ +T VP + + V+
Sbjct: 223 NSIGVQLLAGASAVLVPAFNPEETLHLIQKYKITVTGGVPTMYRIMFRSCSVRNF--DVS 280
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G +EL+ E +F + +++GMTETS TF P
Sbjct: 281 SIRVLRVSGEPSSAELINEIKRNFVNVTIATSWGMTETSGFFTFTK------------PN 328
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQF 296
N+ N+V G P ++K+ ++ +G IL +G V+ Y ++
Sbjct: 329 DDINIVANTV--------GAPGDGYQMKILKTNDTWAQTAEIGEILVKGDSVISGYLNEE 380
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
K S G WL TGD+G +D+ + GR SGG NVYP E+E+ L ++PG+
Sbjct: 381 DNKNSFYNG--WLKTGDLGYLDENNYLHFAGRLKEMYISGGYNVYPLEIESFLNKYPGVS 438
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
V++ I + W E C + L E L+++C+ K L
Sbjct: 439 ASVIIAIPDE----------------IWGEVGCAFIIPHDNTNLDIESLKEYCK-KGLAD 481
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+K P+ F++ R P T+ GKI + E++R + ++
Sbjct: 482 YKQPKKFIIERN-LPKTAIGKIAKQEIKRYLEKYI 515
>gi|340500544|gb|EGR27412.1| hypothetical protein IMG5_195940 [Ichthyophthirius multifiliis]
Length = 496
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 197/453 (43%), Gaps = 47/453 (10%)
Query: 14 ELQHTAIPSLRWHVSLGSS-SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 72
EL+++ P L++ + + S + + +N + ++ + +S + + +P+ I F
Sbjct: 75 ELKNSKFPKLKYIIKIEDSPTQNMINFKSLMQIPKKEDFS-KINKILKNTSPDDITNIQF 133
Query: 73 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVG 131
TSGTTG PKG ++H ++ +G D + PL H G+ + L G
Sbjct: 134 TSGTTGRPKGASLTHFNILNNGYYIADRLGLNSQDKICLSVPLYHCFGMVIGNLCALNFG 193
Query: 132 ACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
A V + F ++ LEA+ ++ T+L VP + + +S+ K + G
Sbjct: 194 ATIVINSEGFSAQKTLEAITKYKCTTLYGVPTMFYEYIKEYEAYPHQYNINSLNKGVMAG 253
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P LM++ N + L YGMTETS ++F T +LE
Sbjct: 254 SLCPQVLMEKLKNQWNIKDLQICYGMTETSP-VSFQTSKTDSLEDSCS------------ 300
Query: 251 VHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTG 305
VG+ PH+E K+ + +G I RG VM +YWD
Sbjct: 301 -------TVGQILPHLESKLINKKGKIVPRGEIGEIYIRGYSVMQKYWDDIKKTNETIDI 353
Query: 306 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 365
W+ TGD+G +D+ G + +VGR I GGEN+YP+E+E L + P I+ + +VGI N
Sbjct: 354 NSWIKTGDLGKMDERGYMQIVGRSKDIIIRGGENIYPKEIEEYLRKIPKIMDVQIVGIPN 413
Query: 366 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 425
+ E + + L N + + + + C K + FK P+ +V
Sbjct: 414 KKYGEEIFCLIIL----------------NPNVYFDKQEVYEFCNRK-IAYFKVPK-YVK 455
Query: 426 WRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
FPLT TGK ++ + +++ + NL
Sbjct: 456 IVDQFPLTVTGKPQKFIIVNDLIKEMDGNEHNL 488
>gi|312138984|ref|YP_004006320.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
gi|311888323|emb|CBH47635.1| putative acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
Length = 500
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 184/390 (47%), Gaps = 40/390 (10%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
PE ++ TSGTTG PK ++ H L+ L + G G D+ L + P HI G++
Sbjct: 142 PEAPAVLLHTSGTTGPPKIAILRHRHLVSYVLGGTELFGAGPDEAALVSVPPYHIAGVAG 201
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
+ L G V +P F+++ + V + +T + VP ++A + ++ + G S+
Sbjct: 202 LLTGLYSGRRIVQMPNFDAREWVRLVREQEITHAMVVPTMLARIVDVL--TEDGGGLPSL 259
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + GGG +P +++ A P ++ YG+TETSSS+ + P + A
Sbjct: 260 RHLSYGGGRMPLPVIERALGLLPDVDFVNGYGLTETSSSVAVLG--------PAEHRAAV 311
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 298
+ P+ V + G VG P P VE+ V D V G + RGA V Y +
Sbjct: 312 SSSDPD-VQRRLG-SVGLPVPDVEIVVRDDAGRDVAPGERGELWVRGAQVSGEY-----S 364
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
S+ + W T D G IDDGG V++ GR + I GGEN+ P E+E V+ +HP + +
Sbjct: 365 GASLLDSDGWFRTRDGGWIDDGGYVYVEGRLDDVIVRGGENLSPGEIEDVIGEHPSVEDV 424
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VV G+ + + E+VVA V R E +L+++ +R + L +
Sbjct: 425 VVYGVPDDQWGEIVVAAVVPR----------------PEGVLTADEIRAWVGAR-LRSSR 467
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVM 448
P FV +R P GK+ R +R E +
Sbjct: 468 VP-AFVEFRTDVPRNDLGKVLRRVLRDEFV 496
>gi|336235213|ref|YP_004587829.1| long-chain-fatty-acid--CoA ligase [Geobacillus thermoglucosidasius
C56-YS93]
gi|335362068|gb|AEH47748.1| Long-chain-fatty-acid--CoA ligase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 544
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 186/402 (46%), Gaps = 53/402 (13%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-I 118
+S P + + +TSGTTG PKGV+++H ++ + + ++D P H
Sbjct: 182 NSLDPHDVINMQYTSGTTGFPKGVMLTHYNIVNNAYNIAQCMKLTKEDRLCIPVPFFHCF 241
Query: 119 GGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
G + +A + VGA V I +F K L+ V+ T+L VP + +A L
Sbjct: 242 GCVLGTLACVSVGATMVPIQEFNPKQVLQTVQDEKCTALHGVPTMF--IAELNDPDFEKY 299
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT---LET 235
S++ + G P E+MK ++ AYG TE+S +T DP +ET
Sbjct: 300 DLSSLRTGIMAGSPCPIEVMKAVMEKMGAKEITIAYGQTESSPVITQTRTDDPIHIRVET 359
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVM 289
VG+ P+VE+K+ ++ G + TRG HVM
Sbjct: 360 -----------------------VGRALPNVEVKIVDPSTNKEVPPGVQGELCTRGYHVM 396
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
Y+ A V + WL TGD+ +D+ G + GR I GGEN+YP E+E L
Sbjct: 397 KGYYKNPGATKEVIDEDGWLHTGDLAVMDENGYCRITGRLKDMIIRGGENIYPREIEEFL 456
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
+HP I+ + VVG+ + + E V+A + L+E Q++ ++E +R+ C
Sbjct: 457 YKHPKILDVQVVGVPDEKYGEEVMAWIILKEG---------QTA-------TAEEIREFC 500
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
R K ++ K PR ++ + +P+T++GKI++ ++R L
Sbjct: 501 RGK-ISRHKIPR-YIEFTDSYPMTASGKIQKFKLREMAKQRL 540
>gi|392944076|ref|ZP_10309718.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Frankia sp.
QA3]
gi|392287370|gb|EIV93394.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Frankia sp.
QA3]
Length = 499
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 180/384 (46%), Gaps = 41/384 (10%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
++ FTSGTTG PK V+ HS L ++ + G +D+ + + P HI G+S+ ++
Sbjct: 147 VLLFTSGTTGEPKAAVLRHSNLTEYIISTVEFAGSAQDEAAIVSVPPYHIAGISAVLSST 206
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
G V + F+ + + V + +T + VP ++ + + V+ G S++ +
Sbjct: 207 YSGRRVVQLEAFDPTAWVTIVREESITHAMVVPTMLGRILDI--VEADGLGLPSLRSLSY 264
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
GGG +P +++ A P ++AYG+TETSS++ + P AF + P
Sbjct: 265 GGGPMPLPVIERAVGLLPNVGFVNAYGLTETSSTIAVLG--------PDDHQAAFASDDP 316
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
+ + VGKP P +E+ + V G I RG V ++L + +
Sbjct: 317 AV--RARLASVGKPLPTLEVSIRDAVGIEVPVGERGEIYVRGGQVS----GEYLGRGTTL 370
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W T D G +D+ G +++ GR + I GGEN+ P E+EAVLL+HPG++ VVGI
Sbjct: 371 DSDGWFPTRDEGHLDEAGYLFVHGRLDDVIVRGGENLSPGEIEAVLLEHPGVLEAAVVGI 430
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
N E VVA V ++ E L+ H R + L + P
Sbjct: 431 PNKEWGEQVVAAVVTSGG------------------VTEEDLKAHVRTR-LRSSRTPD-H 470
Query: 424 VLWRKPFPLTSTGKIRRDEVRREV 447
+ +R+ P +GK+ R +R E+
Sbjct: 471 IQFREELPFNESGKLLRRVLRTEL 494
>gi|365091482|ref|ZP_09328883.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
gi|363416088|gb|EHL23211.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
Length = 525
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 188/408 (46%), Gaps = 43/408 (10%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 116
P + E ++ +TSGTTG PKGV H +LA +A Y + L PL
Sbjct: 149 PLQAAVDAEDLSLMLYTSGTTGKPKGVPRRHRQERAAALAHVAQNLYRRGERTLGVMPLY 208
Query: 117 HIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
H G+ S +AM ++ V +P+F+++ AL+ +E +T L VP + D+ L + +++
Sbjct: 209 HTMGVRSLLAMALIDGVFVCMPRFDTQGALDLIEAERLTCLYLVPTLYHDV--LTQRERS 266
Query: 177 WKGRD------SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD 230
+G SVKK+ G + L+K +F ++ YG SS + ++
Sbjct: 267 GRGSGPGPDIASVKKLGFAGAPMHDALLKRLQAAFEPELFVNHYG----SSEVYTFSIDQ 322
Query: 231 PTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVML 290
L+ PG +A N V G + P VE ++ +D RG
Sbjct: 323 QALDKPGSAGRAGINTRLRVVRLDAGDVDARVGPGVEGQIIAD---------LRGDEAFE 373
Query: 291 RYWDQFLAKP-SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
YW + A S+ +G W TGD G +D+ G++++ GR + I SGGEN+ P ++E+V+
Sbjct: 374 GYWKREDANAKSLRSG--WYFTGDTGYLDEDGDLFVTGRVDDMIISGGENISPVDIESVI 431
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
PG+ + V G+++ R + VVA V ++++ L + L HC
Sbjct: 432 SLCPGVGEVAVAGLSDERWGQRVVAFV---------------TTRDGGAPLDAHALDAHC 476
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 457
R +L FK PR +V + P + GK+ R R+ V LP+
Sbjct: 477 RSSDLPNFKRPREYVFVAE-IPKSPVGKVLR---RKLVAGEYTPLPAG 520
>gi|311032883|ref|ZP_07710973.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. m3-13]
Length = 546
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 197/452 (43%), Gaps = 61/452 (13%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEG 66
EL T +P L+ + +GS S D +N + D L + +S E
Sbjct: 139 ELASTRLPKLKNVIYMGSESHPGMFTWDDLLNNSFTIADDEL-------MARQNSTNYED 191
Query: 67 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAM 125
+ + +TSGTTG PKGV+++HS +I ++ +D P H G + +
Sbjct: 192 VINMQYTSGTTGFPKGVMLTHSNIINNAINVAECQKLTSEDKICIPVPFFHCFGCVMGTL 251
Query: 126 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
A + GA V + F+ L+AVEQ T+L VP + +A L S++
Sbjct: 252 AAVAKGATMVPLVMFDPLLVLKAVEQEKCTALYGVPTMF--IAELNHPDFEKYDLSSLRT 309
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P+E+MK + ++ AYG TE S +T YD + A N
Sbjct: 310 GIMAGSPCPTEIMKRVVHDMGAKEITIAYGQTEASPVITQTRPYDSIERRVSTVGSALDN 369
Query: 246 VTPNSV------HQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAK 299
V + H P GV G + TRG VM Y++
Sbjct: 370 VDVKIIDPATGEHVPNGV--------------------QGELCTRGYLVMKGYYNMKDQT 409
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
E WL TGD+ ++DD G V + GR I GGEN+YP E+E L HP I +
Sbjct: 410 KDAIDSEGWLHTGDLATMDDDGYVVITGRLKDMIIRGGENIYPREIEEFLYSHPKIFDVQ 469
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
+VG+ + + E V A ++++ ES L+S+ ++ +C K ++ +K
Sbjct: 470 IVGVPDEKFGEQVAAFIKVKP----GES------------LNSQEVKDYCTGK-ISKYKI 512
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
P +V +P+T++GKI++ ++R ++ L
Sbjct: 513 P-YYVEIVDEYPMTASGKIQKFKLREHAVNTL 543
>gi|294632131|ref|ZP_06710691.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292835464|gb|EFF93813.1| conserved hypothetical protein [Streptomyces sp. e14]
Length = 541
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 199/443 (44%), Gaps = 60/443 (13%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 72
+++H A P LR V + S ++FV + AD L L + + + I +
Sbjct: 135 QVRH-ACPDLREVVYIDDPSWTEFVARDAPDRADEL-------LARAAELSCDDPINIQY 186
Query: 73 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVG 131
TSGTTG PKG +SH ++ ++ Y E D P H G+ +A G
Sbjct: 187 TSGTTGFPKGATLSHHNILNNGYFVGELIAYSEQDRVCVPVPFYHCFGMVMGNLAATSHG 246
Query: 132 ACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
AC V +P F+ + LEAV++ TSL VP + +A L +++ +
Sbjct: 247 ACLV-VPAASFDPAATLEAVQRERCTSLYGVPTMF--IAELNLPGFAEYDLSTLRTGIMA 303
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 304 GSPCPVEVMKRVVAEMHMAEVAICYGMTETSP-VSLQTRMDDDLE--------------- 347
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 303
H+ VG+ PH+E+KV + G + TRG VML YW+Q
Sbjct: 348 --HRTG--TVGRVLPHLEVKVVDPATGVTQPRGRAGELCTRGYSVMLGYWEQPEKTAEAI 403
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
W+ TGD+ + + G V +VGR I GGEN+YP E+E L HP I + VVG+
Sbjct: 404 DAGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIRDVQVVGV 463
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RL 422
+ + E V+ACV D + L+ E LR C ++ L +K P RL
Sbjct: 464 PHEKYGEEVLACV----------IPLDPADP-----LTLEELRAFCADR-LAHYKIPSRL 507
Query: 423 FVLWRKPFPLTSTGKIRRDEVRR 445
VL FP+T +GK+R+ E+R+
Sbjct: 508 SVL--DAFPMTVSGKVRKIELRQ 528
>gi|77993368|ref|NP_001030123.1| acyl-CoA synthetase family member 2, mitochondrial precursor
[Rattus norvegicus]
gi|123781622|sp|Q499N5.1|ACSF2_RAT RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|71121982|gb|AAH99826.1| Acyl-CoA synthetase family member 2 [Rattus norvegicus]
Length = 615
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 187/399 (46%), Gaps = 60/399 (15%)
Query: 70 ICFTSGTTGSPKGVVISH------SALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLS 122
I FTSGTTG+PKG +SH S LI Q L A E+ + PL H +G +
Sbjct: 260 IQFTSGTTGNPKGATLSHHNIVNNSNLIGQRLKMPAKTA--EELRMVLPCPLYHCLGSVG 317
Query: 123 SAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
M ++ GA + P F K ALEA+ + T L P + D+ + + D
Sbjct: 318 GTMVSVVHGATLLLSSPSFNGKKALEAISREKGTLLYGTPTMFVDILN----QPDFSSYD 373
Query: 182 --SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
+++ + G P EL++ + +L+ YG TE +S +TFM + TLE
Sbjct: 374 FTTIRGGVIAGSLAPPELIRAIISKMNMKELVVVYGTTE-NSPVTFMNFPEDTLE----- 427
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW 293
Q G+V G+ PH E ++ + + + G + RG VM YW
Sbjct: 428 -QKAGSV-------------GRIMPHTEAQIVNMETGELTKLNMPGELCIRGYCVMQGYW 473
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
+ + W TGDI S+D+ G +VGR I GGEN+YP E+E +HP
Sbjct: 474 GEPQKTFETVGQDRWYRTGDIASMDEQGFCRIVGRSKDMIIRGGENIYPAELEDFFHKHP 533
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
+ VVG+ + R+ E + AC+RL+ +E E ++ C+ K
Sbjct: 534 QVQEAQVVGVKDDRMGEEICACIRLKSGETTTE----------------EEIKAFCKGK- 576
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
++ FK PR ++++ + +PLT +GKI++ ++R ++ HLK
Sbjct: 577 ISHFKIPR-YIVFVEGYPLTVSGKIQKFKLREQMEQHLK 614
>gi|384103854|ref|ZP_10004818.1| fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
gi|383838685|gb|EID78055.1| fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
Length = 490
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 181/395 (45%), Gaps = 60/395 (15%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIA------IVGYGEDDVYLHTAPLCHIGGLSS 123
+ +T GTTG PK VV++ + LA++A + D V LH AP+ H G +
Sbjct: 145 LAYTGGTTGKPKAVVLTTRS----ELAEVANFLVDLLPNLRPDSVMLHAAPITH-GSGAF 199
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
+ L+ GA +V + KF + LEA +++ TS VP + +A L+ T ++
Sbjct: 200 FLPHLVKGAPNVIVSKFSPGAFLEAGQKYRATSTFMVPTM---IAMLLEDPATAAADLAL 256
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+++ GG + + +++ + YG E ++T + P T +L A
Sbjct: 257 ERLCYGGAPIATSVLQRGIDILGPV-FAQLYGQAEAPLAITCLQ---PWEHTSDRLTSA- 311
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLA 298
GKP VE++V S G VG +LTRG H M RYW + +A
Sbjct: 312 ----------------GKPYTFVEVQVRSTDGTVLGPGEVGEVLTRGPHTMSRYWRRPVA 355
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ WL TGDIG DD G + L+ RR+ I SGG NVYP EVE LL HP ++
Sbjct: 356 TAETIEPDGWLHTGDIGRWDDDGYLHLLDRRHDVIISGGFNVYPREVEDALLTHPAVVEA 415
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG+ + + E V A V R + + E + + C ++ L GFK
Sbjct: 416 AVVGLPDDKWGERVAAAVVTRSAAEPDE------------------ILEFCADR-LAGFK 456
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
PR +W P + GK R EVR +++ ++
Sbjct: 457 RPRSLEIWPN-IPTSPVGKSLRREVRDRMVAAARA 490
>gi|161523288|ref|YP_001578300.1| AMP-binding domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|189351939|ref|YP_001947567.1| AMP-binding domain protein [Burkholderia multivorans ATCC 17616]
gi|160340717|gb|ABX13803.1| AMP-dependent synthetase and ligase [Burkholderia multivorans ATCC
17616]
gi|189335961|dbj|BAG45031.1| long-chain fatty-acid-CoA ligase [Burkholderia multivorans ATCC
17616]
Length = 575
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 206/457 (45%), Gaps = 69/457 (15%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEG 66
EL+ +PSLR VS+G + +D + R T D +L +L T A
Sbjct: 163 ELRAARVPSLRTVVSMGDVAPPGMFRFADVI-ARGRATVD---SAALDALGAT--LAATD 216
Query: 67 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-M 125
+ I FTSGTTGSPKG ++H ++ + + + E D PL H G+ A +
Sbjct: 217 PINIQFTSGTTGSPKGATLTHRNVVNNARFIARAMRFSEQDALCIPVPLYHCFGMVLAVL 276
Query: 126 AMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
A + GA VF + F+ + L AV + T+L VP + +A L + +++
Sbjct: 277 ACVSTGAAMVFPGEAFDPVATLAAVAEERCTALHGVPTMF--IAELDHPEFAKFDLSTLR 334
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E MK + +++ AYGMTETS P +F
Sbjct: 335 TGIMAGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSFQ 375
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 299
+ T + + + + VG+ PH+E+K+ V G + T+G VML YWD
Sbjct: 376 SSTDDPLEK-RTTTVGRVQPHLEVKIVDPSGEIVPVGVTGELCTKGYSVMLGYWDD---- 430
Query: 300 PSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
T EV W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I
Sbjct: 431 -DAKTREVLIDGWMHTGDLATLDAEGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKI 489
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
V G+ + + E + A + LR Q +E + +R C + +
Sbjct: 490 QSAQVFGVPDPKYGEELCAWIVLRADEQMTEDD----------------VRAFC-QGQIA 532
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+K PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 533 HYKIPR-YIRFVDELPMTVTGKVQKFVMRERMIDELK 568
>gi|229029657|ref|ZP_04185733.1| Feruloyl-CoA synthetase [Bacillus cereus AH1271]
gi|228731661|gb|EEL82567.1| Feruloyl-CoA synthetase [Bacillus cereus AH1271]
Length = 496
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 183/393 (46%), Gaps = 54/393 (13%)
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
+ IIC+TSGTTG PKG V++ + +L + D + PL HIGG+ A
Sbjct: 150 ASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDSSIVLLPLFHIGGIGLFA 209
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
L G + KFE +AL +E+H VT ++ VP I L + + SV+
Sbjct: 210 FPTLFAGGVIIIPRKFEPTTALSMIEKHKVTVVMGVPTIHQALINSPKFETA--NLQSVR 267
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 268 WFYNGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDAR--------RKI 316
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLA 298
G++ GKP + + + G VG +L RG +VM YW++ A
Sbjct: 317 GSI-------------GKPVLFCDYVLIDENKNKVGIGEVGELLIRGPNVMKEYWNRPDA 363
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
K ++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + +
Sbjct: 364 TKETIQDG--WLYTGDLAKVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKISEVYE 421
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG + + E+ +A + + S + +E EV+ C L +
Sbjct: 422 VAVVGRQHVKWGEIPIAFIVKKSSSELTE---------------KEVIEHCCL--FLAKY 464
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
K P+ V + P +TGKI++ ++ ++ S
Sbjct: 465 KVPKEIVFLEE-LPKNATGKIQKVQLANQLKSR 496
>gi|386758568|ref|YP_006231784.1| short-chain acyl-CoA synthetase [Bacillus sp. JS]
gi|384931850|gb|AFI28528.1| short-chain acyl-CoA synthetase [Bacillus sp. JS]
Length = 549
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 175/385 (45%), Gaps = 47/385 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMV 130
+TSGTTG PKGV+++H +I + + D P H G + +A + V
Sbjct: 197 YTSGTTGFPKGVMLTHFNVINNAANIAECMALSAQDRMCIPVPFFHCFGCVLGVLACVSV 256
Query: 131 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
GA + +P+F+ + L+ VE+ T+L VP + +A L +++ + G
Sbjct: 257 GAAMIPVPEFDPVTVLKTVEKEKCTALHGVPTMF--IAELHHPDFDAYDLSTLRTGIMAG 314
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
PSE+MK + AYG TE S +T N
Sbjct: 315 SPCPSEVMKAVIERMGMKDITIAYGQTEASPVIT--------------------QTRAND 354
Query: 251 VHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVST 304
+ G+ PH E+K+ G+ G + TRG HVM Y+ A V
Sbjct: 355 SFIRRVETTGRALPHTEVKIVEPGTCQEVQRGVQGELCTRGYHVMKGYYKDKEATRKVIN 414
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
+ WL TGD+ +D+ G + GR + GGEN+YP E+E L +HP ++ + VVG+
Sbjct: 415 HDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAVLDVQVVGVP 474
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+A+ E A ++L++ +SS+ L+ +C+ K + K PR +V
Sbjct: 475 DAKFGEEAAAWIKLKDGKS----------------VSSDELKAYCKGK-IARHKIPR-YV 516
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMS 449
++ +P+T++GKI++ ++R + +
Sbjct: 517 IFTDDYPMTASGKIQKYKLREKTIE 541
>gi|383642924|ref|ZP_09955330.1| AMP-binding domain protein [Streptomyces chartreusis NRRL 12338]
Length = 532
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 170/383 (44%), Gaps = 47/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ ++ Y E D P H G+ +A
Sbjct: 181 IQYTSGTTGFPKGATLSHHNILNNGYFVGELIAYTEQDRICIPVPYYHCFGMVMGNLAAT 240
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GAC V P F+ K+ LEAV+Q TSL VP + +A L S++ +
Sbjct: 241 SHGACMVIPAPSFDPKATLEAVQQERCTSLYGVPTMF--IAELNLPGFASYDLSSLRTGI 298
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK ++ YGMTETS ++ T D LE
Sbjct: 299 MAGSPCPVEVMKRVVAEMHMQQVSICYGMTETSP-VSLQTRMDDDLE------------- 344
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPS 301
H+ VG+ PH+E+K+ + G + TRG VML YW++
Sbjct: 345 ----HRTG--TVGRVLPHIEVKIVDPATGVTRPRGTAGELCTRGYSVMLGYWNEPEKTAE 398
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ + + G V +VGR I GGEN+YP E+E L HP I + VV
Sbjct: 399 AVDAGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIQDVQVV 458
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + R E V+ACV + L+ + LR C+ + L +K P
Sbjct: 459 GVPHDRYGEEVLACV---------------IPHDPADPLTLDELRTFCQGR-LAHYKIPT 502
Query: 422 LFVLWRKPFPLTSTGKIRRDEVR 444
L FP+T +GK+R+ E+R
Sbjct: 503 GLQLLDS-FPMTVSGKVRKVELR 524
>gi|158314953|ref|YP_001507461.1| AMP-dependent synthetase and ligase [Frankia sp. EAN1pec]
gi|158110358|gb|ABW12555.1| AMP-dependent synthetase and ligase [Frankia sp. EAN1pec]
Length = 533
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 174/377 (46%), Gaps = 55/377 (14%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
PE V I +TSGTTG PKG ++H + + + +G E D +++ PL H G
Sbjct: 203 PEDPVQIQYTSGTTGFPKGAYLAHQGMALNARLYAEAIGASERDTWVNPLPLFHTAGCGL 262
Query: 124 A-MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
A + +L G CHV FE+ + ++ + T + VP + + L ++ DS
Sbjct: 263 ATLGILQTGGCHVLPQGFETDLMFDLIDTYKATVTLGVPTMF--IRMLEKLPTGSMLLDS 320
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ-LPQ 241
++ + GG +P EL++ F + +G TE+S +T PGQ LP
Sbjct: 321 LRIVTTGGAPVPVELVRRLEKEF-GVMVAIGFGQTESSPYITHTR--------PGQDLPH 371
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQF 296
VG+P P VE+K+ DGS G I TRG VM Y++
Sbjct: 372 -------------WAETVGRPLPRVEVKISRPDGSVADVDEGGEICTRGVCVMKGYFENP 418
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
A WL TGD+G++D G V ++GR I GGEN+YP +VEA L +HP +
Sbjct: 419 EATSQTIDQNGWLHTGDVGTMDSHGYVRVLGRFKDLIIRGGENIYPRDVEAALSEHPDVT 478
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ VVG+ + E+V A V Q+SK L+++ L+ R K L
Sbjct: 479 DVAVVGLPDGEWGEIVGAFV--------------QTSKP----LTADGLQAFLRGK-LAS 519
Query: 417 FKAPRLFVLWRKP--FP 431
+K P+ +WR P FP
Sbjct: 520 YKIPQ---VWRFPKEFP 533
>gi|423719772|ref|ZP_17693954.1| acyl-CoA synthetase, AMP-binding [Geobacillus thermoglucosidans
TNO-09.020]
gi|383367260|gb|EID44540.1| acyl-CoA synthetase, AMP-binding [Geobacillus thermoglucosidans
TNO-09.020]
Length = 544
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 186/402 (46%), Gaps = 53/402 (13%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-I 118
+S P + + +TSGTTG PKGV+++H ++ + + ++D P H
Sbjct: 182 NSLDPHDVINMQYTSGTTGFPKGVMLTHYNIVNNAYNIAQCMKLTKEDRLCIPVPFFHCF 241
Query: 119 GGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
G + +A + VGA V I +F K L+ V+ T+L VP + +A L
Sbjct: 242 GCVLGTLACVSVGATMVPIQEFNPKQVLQTVQDEKCTALHGVPTMF--IAELNDPDFEKY 299
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT---LET 235
S++ + G P E+MK ++ AYG TE+S +T DP +ET
Sbjct: 300 DLSSLRTGIMAGSPCPIEVMKAVMEKMGAKEITIAYGQTESSPVITQTRTDDPIHIRVET 359
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVM 289
VG+ P+VE+K+ ++ G + TRG HVM
Sbjct: 360 -----------------------VGRALPNVEVKIVDPSTNKEVPPGVQGELCTRGYHVM 396
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
Y+ A V + WL TGD+ +D+ G + GR I GGEN+YP E+E L
Sbjct: 397 KGYYKNPGATKEVIDEDGWLHTGDLAVMDENGYCRITGRLKDMIIRGGENIYPREIEEFL 456
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
+HP I+ + VVG+ + + E V+A + L+E Q++ ++E +R+ C
Sbjct: 457 YKHPKILDVQVVGVPDEKYGEEVMAWIILKEG---------QTA-------TAEEIREFC 500
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
R K ++ K PR ++ + +P+T++GKI++ ++R L
Sbjct: 501 RGK-ISRHKIPR-YIEFTDSYPMTASGKIQKFKLREMAKQRL 540
>gi|163942257|ref|YP_001647141.1| long-chain-fatty-acid--CoA ligase [Bacillus weihenstephanensis
KBAB4]
gi|163864454|gb|ABY45513.1| AMP-dependent synthetase and ligase [Bacillus weihenstephanensis
KBAB4]
Length = 561
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 185/389 (47%), Gaps = 53/389 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAK---IAIVGYGEDDVYLHTAPLCHIGGLSSAM 125
++ +T GTTG PKGV+++H L+ +L + GE+ V L P H+ G+++ M
Sbjct: 208 LLQYTGGTTGFPKGVMLTHKNLVSNTLMGAHWLYNCKEGEE-VILGVLPFFHVYGMTAVM 266
Query: 126 AM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ +M G V IPKF+ K EA+++H VT P I L +K+ S++
Sbjct: 267 NLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQ 324
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
++G LP E+ +E S KL+ YG+TE+S L++ ++P + G
Sbjct: 325 ACISGSAPLPVEV-QEEFESVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIG 377
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
P++ + G+ P S +G I+ +G +M YW+ KP +
Sbjct: 378 VPWPDTEAIIMSLETGEALP----------SGEIGEIVVKGPQIMKGYWN----KPEETA 423
Query: 305 G---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +
Sbjct: 424 AVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTI 483
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + E V A V L+E + SE DQ ++ K L +K P+
Sbjct: 484 GVPDPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPK 526
Query: 422 LFVLWRKPFPLTSTGKIRR----DEVRRE 446
++ +R P T+ GKI R DE +R+
Sbjct: 527 VYE-FRSELPKTTVGKILRRVLIDEEKRK 554
>gi|397732318|ref|ZP_10499053.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396931892|gb|EJI99066.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 542
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 180/402 (44%), Gaps = 48/402 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS- 122
P V I +TSGTTG PKG ++ H +I ++ E V ++ P+ HIGG +
Sbjct: 177 PMDPVQIQYTSGTTGFPKGALLHHKGIINEANFVFDRADMEEAGVCINAMPMYHIGGGAV 236
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+ + +V +P F++ LE +E + T + VP ++ +A L + S
Sbjct: 237 TELGTFSKRGTYVVLPAFDAAQTLEMIETYNGTHSLMVPTML--IALLEHPDLATRDISS 294
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ +L+G +P L+ + + +G TE ++ + D ++
Sbjct: 295 LRTVLSGAATVPESLIHRVIDRL-DCRFTILFGQTEMHGVISQTRVTDDPVD-------- 345
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQF 296
Q VG+P P +E+K+ + G I RG ML Y++
Sbjct: 346 ------------QATTVGQPLPELEVKIADPLTGEALPIGEQGEICCRGYQNMLGYYEMP 393
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
A + E WL GD+G+ID G + + GR I GG N+YP E+E +L QHP I
Sbjct: 394 DATAATIDAEGWLHMGDLGTIDTRGFIKVTGRLTEVIIRGGVNLYPREIEELLFQHPSIA 453
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
++VVG+ + R E V A +RL + + + L+ CRE+ ++
Sbjct: 454 DVIVVGVPDERWGEQVGAVIRLHDGHDRPDPSA---------------LKSWCRER-ISA 497
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVR-REVMSHLKSLPSN 457
KAP L+ + FP+T +GKI++ +R R + L S P
Sbjct: 498 HKAPSLWYFTDQ-FPMTPSGKIQKFRLRDRIIAGELASAPER 538
>gi|307946491|ref|ZP_07661826.1| acyl-CoA synthetase family member 2 [Roseibium sp. TrichSKD4]
gi|307770155|gb|EFO29381.1| acyl-CoA synthetase family member 2 [Roseibium sp. TrichSKD4]
Length = 499
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 188/392 (47%), Gaps = 48/392 (12%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ A I +TSGTTG PKG V+SH L+ + A G V+ + PL H G ++
Sbjct: 142 PDDAAQIQYTSGTTGFPKGAVLSHKNLVNNARLFCARKQVGPHSVWANFMPLFHTAGCAT 201
Query: 124 AMAMLMVGACH-VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+ AC + I +F++ +E+ VT+ VP ++ +L L + +T + S
Sbjct: 202 GALGCLQAACKMLLIKRFDADVFARLIEEQGVTTCFAVPTMLFNL--LESLDRTSRDMSS 259
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL---YDPTLETPGQ- 238
++ I GG +P +L++ + L+SA+G TE S + + + +ET GQ
Sbjct: 260 LEVITTGGAPVPPDLVRRVKDRL-GCHLLSAFGQTEHSPMICLNPVEATLEQIVETAGQP 318
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA 298
LPQ T S+ P+ + +V S G VG I R VM+ Y D A
Sbjct: 319 LPQ-----TEVSIRSPE-----------DNRVLSIG--EVGEICARSYAVMIGYNDNLEA 360
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ GE WL TGD+G++D G V + GR I GGEN +P E+EAVL+ H + +
Sbjct: 361 TDAAIDGEGWLHTGDLGTMDAQGFVRVTGRVKDMIIRGGENHFPAEIEAVLVTHRHVAQV 420
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG+ + + E++ A + S+ D + LR HCR L+ K
Sbjct: 421 AVVGLPDEKWGEVIAAFI-------LSDGPFDVAD-----------LRTHCR-AYLSAQK 461
Query: 419 APRLFVLWRKP-FPLTSTGKIRRDEVRREVMS 449
P ++V R P PL +GK+++ +R + ++
Sbjct: 462 TPSVWV--RVPDLPLMGSGKVQKFAIREKFLA 491
>gi|333369906|ref|ZP_08461993.1| AMP-binding domain protein [Psychrobacter sp. 1501(2011)]
gi|332969073|gb|EGK08112.1| AMP-binding domain protein [Psychrobacter sp. 1501(2011)]
Length = 599
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 185/392 (47%), Gaps = 53/392 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAML 128
+ FTSGTTG+PKG ++H ++ + +D PL H G+ +A+L
Sbjct: 249 VQFTSGTTGTPKGATLTHRNILNNGYFIGEAMDLSAEDRLCIPVPLYHCFGMVLGNLAIL 308
Query: 129 MVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 186
G C ++ P FE S L+AVE+ T+L VP + +A L +++
Sbjct: 309 THGGCIIY-PNDGFEPLSVLKAVEEEKCTALHGVPTMF--IAELEHPDFDQYDLSTLRTG 365
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
+ G P E+M+ + +++ AYGMTETS
Sbjct: 366 IMAGSSCPIEVMRRVIDEMHMSEVTIAYGMTETSP--------------------VSCQT 405
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQFLAK 299
N+ Q VG P++E+K+ + V G +LTRG VM YW +F +
Sbjct: 406 NKNTPLDKQVSTVGLVQPNLEVKIVDTETGEVVPIGETGELLTRGYSVMKGYWGSRFKTR 465
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
S+ G W+ TGD+ ++D+ G + +VGR + GGEN+YP E+E L +HP I +
Sbjct: 466 ESIKDG--WMHTGDLATMDEEGYIKVVGRSKDMVIRGGENIYPVEIENYLYRHPKISDVQ 523
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
+VG+ + + E++ A W ++ N + L+ E ++Q C+E N+ +K
Sbjct: 524 IVGVPDQKYGEVLAA-------WIIAKQNVE---------LTEEEVKQFCKE-NIAHYKI 566
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
P+ F ++ +P+T TGKI++ ++ ++ L
Sbjct: 567 PKYFRFVQE-YPMTITGKIQKYKITEMMIEEL 597
>gi|421477536|ref|ZP_15925356.1| AMP-binding enzyme [Burkholderia multivorans CF2]
gi|400226391|gb|EJO56469.1| AMP-binding enzyme [Burkholderia multivorans CF2]
Length = 575
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 206/457 (45%), Gaps = 69/457 (15%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEG 66
EL+ +PSLR VS+G + +D + R T D +L +L T A
Sbjct: 163 ELRAARVPSLRTVVSMGDVAPPGMFRFADVI-ARGRATVD---SAALDALGAT--LAATD 216
Query: 67 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-M 125
+ I FTSGTTGSPKG ++H ++ + + + E D PL H G+ A +
Sbjct: 217 PINIQFTSGTTGSPKGATLTHRNVVNNARFIARAMRFSEQDALCIPVPLYHCFGMVLAVL 276
Query: 126 AMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
A + GA VF + F+ + L AV + T+L VP + +A L + +++
Sbjct: 277 ACVSTGAAMVFPGEAFDPVATLAAVAEERCTALHGVPTMF--IAELDHPEFAKFDLSTLR 334
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E MK + +++ AYGMTETS P +F
Sbjct: 335 TGIMAGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSFQ 375
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 299
+ T + + + + VG+ PH+E+K+ V G + T+G VML YWD
Sbjct: 376 SSTDDPLEK-RTTTVGRVQPHLEVKIVDPSGEIVPVGVTGELCTKGYSVMLGYWDD---- 430
Query: 300 PSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
T EV W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I
Sbjct: 431 -DAKTREVLIDGWMHTGDLATLDAEGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKI 489
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
V G+ + + E + A + LR Q +E + +R C + +
Sbjct: 490 QSAQVFGVPDPKYGEELCAWIVLRADEQMTEDD----------------VRAFC-QGQIA 532
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+K PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 533 HYKIPR-YIRFVDELPMTVTGKVQKFVMRERMIDELK 568
>gi|229491677|ref|ZP_04385498.1| medium-chain acyl-CoA ligase [Rhodococcus erythropolis SK121]
gi|229321358|gb|EEN87158.1| medium-chain acyl-CoA ligase [Rhodococcus erythropolis SK121]
Length = 514
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 174/383 (45%), Gaps = 49/383 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTT PKGV ++H + + ++ + DVYLHT P H G
Sbjct: 165 INYTSGTTARPKGVQLTHRSNWINAVVFGWQATVTDRDVYLHTLPTFHANGWGHPFVTTA 224
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG----RDSVKK 185
+GA V + K + L +E+H VT L PA+++ ++ KTW+G RD V+
Sbjct: 225 IGAKSVVLRKVDGAEILRRIEEHGVTYLCAAPAVVS---AILDAAKTWEGEIPGRDRVRI 281
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTF--MTLYDPTLETPGQLPQAF 243
I+ G P E + I YG+TETS LT M L P Q +
Sbjct: 282 IV--AGAPPPTRTIERIRVDLGWEFIQIYGLTETSPLLTMSRMRAEWDDLPVPEQA-RLL 338
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 303
G G PA V++KV G +L R H++ YW+ A S
Sbjct: 339 GRA-------------GAPAIGVQIKV-----DDTGEVLARSNHILASYWENPEATASAL 380
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W TGD G+ DDG V + R+ I +GGENV EVE L+ HP + + V+GI
Sbjct: 381 EDD-WFHTGDGGTFDDG-YVTIADRKKDVIITGGENVTSIEVEDALMSHPAVREVAVIGI 438
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E+V A V L ES + + L HCR + L G+K P+
Sbjct: 439 PDEKWGELVTALVVLDESVE---------------PIDEAALIAHCRTR-LAGYKCPKR- 481
Query: 424 VLWRKPFPLTSTGKIRRDEVRRE 446
V +R T+TGKI++ ++R+E
Sbjct: 482 VEFRSELARTATGKIQKFKLRQE 504
>gi|352080679|ref|ZP_08951618.1| AMP-dependent synthetase and ligase [Rhodanobacter sp. 2APBS1]
gi|351683960|gb|EHA67036.1| AMP-dependent synthetase and ligase [Rhodanobacter sp. 2APBS1]
Length = 557
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 178/392 (45%), Gaps = 49/392 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMA 126
V I FTSGTTG+PKG ++H ++ + E D P H G+ +A
Sbjct: 205 VNIQFTSGTTGAPKGATLTHHNIVNNGWFIGEAMRLTEYDRLCIPVPFYHCFGMVLGNLA 264
Query: 127 MLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ GAC V IP F++ + LE V + T L VP + +A L + +++
Sbjct: 265 CVTHGACMV-IPGEGFDALATLETVAEEKCTGLHGVPTMF--IAELEHPRFVEFDLSTLR 321
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E+M+ A++ AYGMTETS ++F T+ D LE
Sbjct: 322 TGIMAGSPCPIEVMRRVVGEMHLAEITIAYGMTETSP-VSFQTVPDDPLER--------- 371
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 299
+ VG+ P +E+K+ + V G + TRG VML YW+
Sbjct: 372 ----------RVDSVGRIHPQLEVKLVDERGRIVPRGTPGELCTRGYSVMLGYWEDESRT 421
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
V W+ TGD+ ID G +VGR I GGENVYP E+E L HP ++ +
Sbjct: 422 REVIDAARWMHTGDLAVIDADGYCRIVGRLKDMIIRGGENVYPREIEEFLYAHPKVLDVQ 481
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V G+ + + E V A VRLRE SE+ ++ +CR +L +K
Sbjct: 482 VFGVPDTKFGEQVCAWVRLREGAGASEAE----------------IQDYCRH-HLAYYKV 524
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
P +V + FP+T TGK+++ +R ++ L
Sbjct: 525 PH-YVRFVDAFPMTVTGKVQKYRMREAMVDEL 555
>gi|432342459|ref|ZP_19591730.1| CoA synthetase [Rhodococcus wratislaviensis IFP 2016]
gi|430772506|gb|ELB88263.1| CoA synthetase [Rhodococcus wratislaviensis IFP 2016]
Length = 511
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 177/383 (46%), Gaps = 40/383 (10%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-M 127
++ ++SGTTG+PKGV++SH ++ +L ++ + L APL HIGG+ A+
Sbjct: 163 VLMYSSGTTGAPKGVMLSHGNMLWNALNQLLAQDMTSKERTLSVAPLFHIGGIGGAVTPT 222
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
L+ G V + KF++ L+ +E+ +T+ VP ++ +L R S++ I
Sbjct: 223 LLNGGTVVLLRKFDAGVVLDTIEKERITTFFAVPTMIQELWHHPRFADA--DVSSLRAIC 280
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G LP L+ + + AYG+TET+ S+T ++ D + + F T
Sbjct: 281 VAGAPLPEALISPWQDR--DVAITQAYGLTETAPSVTMLSSADVRTKIGSAGKRTF--FT 336
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
V +P G PH +G I+ +G +VML Y +Q A +
Sbjct: 337 DVDVVRPDG---SSAEPH-----------EIGEIVAKGPNVMLGYLNQPEATARTIV-DG 381
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
WL TGD G DD G +++ R SGGENVYP EVEA LL+ GI V+G+ + +
Sbjct: 382 WLHTGDAGYFDDEGFLFICDRYKDMYISGGENVYPAEVEAALLRLEGIREAAVIGVPHEK 441
Query: 368 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 427
W E+ L E +R REK L GFK P +
Sbjct: 442 ----------------WGETGMAFVVAADGTTLDEETVRVRLREK-LAGFKIPTCIQI-A 483
Query: 428 KPFPLTSTGKIRRDEVRREVMSH 450
+ P T+TGKIR+ ++R+ S
Sbjct: 484 EALPRTATGKIRKPDLRKLAASQ 506
>gi|119963319|ref|YP_946756.1| O-succinylbenzoate-CoA ligase [Arthrobacter aurescens TC1]
gi|119950178|gb|ABM09089.1| O-succinylbenzoate-CoA ligase [Arthrobacter aurescens TC1]
Length = 516
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 185/395 (46%), Gaps = 47/395 (11%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 116
P S + A +I +TSGTTG PKG +++H + + + + +DV L +PL
Sbjct: 161 PLDESVTLDDAAMILYTSGTTGKPKGALLTHGNITWNCINTVVDMDLSRNDVALMISPLF 220
Query: 117 HIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK 175
H+ L + ML+ GA V KF++ AL+ V QH VT+L VP L
Sbjct: 221 HVASLDMGLLPMLLKGATVVLESKFDAGRALQLVAQHKVTTLNGVPTTFQMLCD----HP 276
Query: 176 TWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 233
W D S++K+ GG +P +++ S YGMTET+ T + + +
Sbjct: 277 GWSTADLTSLEKLTCGGSAVPGRVLEAYEQR--GIGFTSCYGMTETAPGTTMLPV-SRSK 333
Query: 234 ETPGQ--LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLR 291
E G LP F +V + +P G + + G VG I G +V+
Sbjct: 334 EKAGSAGLPHFFTDV---RIAEPLG------------GIAALG--EVGEIQISGPNVIKE 376
Query: 292 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
YW++ A + W +GD+G D G +++ R I SGGEN+YP EVEA + +
Sbjct: 377 YWNRPEATAESYSDSSWFRSGDMGYQDGDGFLFVSDRIKDMIISGGENIYPAEVEAAIAE 436
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
P + + V+G+ + + E+ A V LRE+ +E E LR H E
Sbjct: 437 LPAVGSVAVIGVDDQKWGEVPRAIVTLRENASLTE----------------EQLRSHL-E 479
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
L +K P+ V++ + P T++GKIR+ ++R++
Sbjct: 480 GRLARYKIPK-SVVFVEEMPRTASGKIRKMDLRKQ 513
>gi|407981729|ref|ZP_11162422.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
gi|407376743|gb|EKF25666.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
Length = 497
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 188/396 (47%), Gaps = 45/396 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ ++ FTSGTT PK V ++H+ L + D L P HI G+ +
Sbjct: 138 PDDVAVVLFTSGTTSRPKAVELTHNNLTSYVTGTVEFDSAEPADAALICVPPYHIAGVGA 197
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK-GRDS 182
A+ L G V++ +F+ + + V + +T+ VP + L ++RV ++ +
Sbjct: 198 ALTNLYAGRKMVYLRQFDPRDWVRLVREEGITTATVVPTM---LDRIVRVLESESVDLPT 254
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + GG +P L+++A P ++AYG+TETSS++ + P A
Sbjct: 255 LRNLAYGGSKVPLPLVRKALQLLPDVGFVNAYGLTETSSTIAVLA--------PEDHRTA 306
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFL 297
T SV + G VG+P P VE+++ + G + G + RG V RY D
Sbjct: 307 LA-ATDESVARRLG-SVGQPVPGVEVQIRDEAGNVLGPNQTGELFVRGEQVSGRYTDIG- 363
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
SV + W T DI +D+ G +++ GR + I GGEN+ P E+E VL++HP +
Sbjct: 364 ---SVLDEDGWFPTKDIAMLDEHGYLYIGGRSDDTIIRGGENIAPAEIEDVLVEHPAVRD 420
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
VVG+ + + +++VA V D + + E LR H R +L G
Sbjct: 421 CAVVGVEDPQWGQIIVAVV----------VPTDGTEPDP------EELRAHVR-AHLRGS 463
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
+ P V++R P +TGK+ +RRE+++ L +
Sbjct: 464 RTPDR-VVFRDELPTNATGKV----LRRELVAELTA 494
>gi|392961068|ref|ZP_10326531.1| AMP-dependent synthetase and ligase [Pelosinus fermentans DSM
17108]
gi|421055058|ref|ZP_15518022.1| AMP-dependent synthetase and ligase [Pelosinus fermentans B4]
gi|421061347|ref|ZP_15523690.1| AMP-dependent synthetase and ligase [Pelosinus fermentans B3]
gi|421065469|ref|ZP_15527215.1| AMP-dependent synthetase and ligase [Pelosinus fermentans A12]
gi|421071938|ref|ZP_15533051.1| AMP-dependent synthetase and ligase [Pelosinus fermentans A11]
gi|392440161|gb|EIW17849.1| AMP-dependent synthetase and ligase [Pelosinus fermentans B4]
gi|392446526|gb|EIW23811.1| AMP-dependent synthetase and ligase [Pelosinus fermentans A11]
gi|392450033|gb|EIW27088.1| AMP-dependent synthetase and ligase [Pelosinus fermentans B3]
gi|392454319|gb|EIW31156.1| AMP-dependent synthetase and ligase [Pelosinus fermentans DSM
17108]
gi|392458841|gb|EIW35326.1| AMP-dependent synthetase and ligase [Pelosinus fermentans A12]
Length = 546
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 186/398 (46%), Gaps = 47/398 (11%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IG 119
S + + + +TSGTTG PKGV+++H+ LI + + + + E D P H G
Sbjct: 186 SLDSDDVISMMYTSGTTGFPKGVMLTHNNLIGNACSLAECMDFTEKDRLCIPVPFFHCFG 245
Query: 120 GLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
+ MA ++ GA V I F LE +E+ T++ VP + + L ++K
Sbjct: 246 CVLGTMACVVSGATMVPIVAFNPIKVLEIIEKERCTAVHGVPTMF--IMELEEMEKNKYD 303
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
S++ + G P E+MK+ + ++ YG TE S +T MT D LE
Sbjct: 304 TSSLRTGIMAGSPCPIEVMKKVVDQMGVREITITYGQTEASPGIT-MTRTDDPLEL---- 358
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSSHV-----GRILTRGAHVMLRYW 293
+ VG+ P+VE+K+ + V G + RG + M Y+
Sbjct: 359 ---------------RVTTVGRALPNVEVKIIDPENGKEVPVNTQGELCCRGYNTMKGYY 403
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
A + + WL TGD+ +D+ G + GR I GGEN+YP E+E + HP
Sbjct: 404 KMIEATAAAIDNDGWLHTGDLAVMDENGYCKITGRLKDMIIRGGENIYPREIEEFIYTHP 463
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
+ + VVG+ + + E V+A ++++ +E E L+++CRE N
Sbjct: 464 KVKDVQVVGVPSEKYGEEVMAFIQIKPGNSITE----------------EELKEYCRE-N 506
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ +K P+ ++ + + +P+T++GKI++ ++R M L
Sbjct: 507 IARYKIPK-YIAFVEDYPITASGKIQKYKLRELAMELL 543
>gi|421872931|ref|ZP_16304547.1| AMP-binding enzyme family protein [Brevibacillus laterosporus GI-9]
gi|372457877|emb|CCF14096.1| AMP-binding enzyme family protein [Brevibacillus laterosporus GI-9]
Length = 553
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 193/439 (43%), Gaps = 35/439 (7%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
ELQ +P LR + LG + L + + + P+ V + +T
Sbjct: 139 ELQAERLPQLRRVIYLGEERQPGMYLFKDLYELAEQVTEAEQIDCQKTIHPDSVVNMQYT 198
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGA 132
SGTTG PKGV++SH+ +I ++ + ++D P H G + +A + GA
Sbjct: 199 SGTTGFPKGVMLSHNNIINNAIQVASCQNLHQEDRVCIPVPFFHCFGCVMGTLACVATGA 258
Query: 133 CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
V I F+ K LE V + T+L VP + +A L S++ + G
Sbjct: 259 TMVPIITFQPKVVLEVVSKTRCTALYGVPTMF--IAELNEPTFAQYDLSSLRTGIMAGSP 316
Query: 193 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 252
P E+MK + + AYG TE+S +T T D ++E T H
Sbjct: 317 CPEEVMKNVVDKMGIRDITIAYGQTESSPVVT-QTRVDDSIE--------LRVSTVGRKH 367
Query: 253 QPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 312
P + + P E+ G + TRG VM Y+ E WL TG
Sbjct: 368 DPVEIKLMNPETGEEV-----ARGEQGELCTRGYQVMKGYYKMPEQTAQAIDSEGWLHTG 422
Query: 313 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 372
D+ ++D+ G + GR I GGEN+YP E+E L H ++ + V+G+ + E V
Sbjct: 423 DLATVDESGYYRITGRLKDMIIRGGENIYPREIEEFLYTHLKVLDVQVIGVPDPHYGEQV 482
Query: 373 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 432
+ACV++RE E L S+E L++ C+ K + FK P +V +P+
Sbjct: 483 LACVKVREG---------------ETLTSNE-LKEFCQGK-IARFKIP-YYVQIVSDYPM 524
Query: 433 TSTGKIRRDEVRREVMSHL 451
T++GKI++ ++R + + L
Sbjct: 525 TASGKIQKYKLREQAIEIL 543
>gi|336178863|ref|YP_004584238.1| o-succinylbenzoate--CoA ligase [Frankia symbiont of Datisca
glomerata]
gi|334859843|gb|AEH10317.1| o-succinylbenzoate--CoA ligase [Frankia symbiont of Datisca
glomerata]
Length = 527
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 183/385 (47%), Gaps = 48/385 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +TSGTTGSPK VV+SH + + + + ++G G+D+V LH APL H G +L+
Sbjct: 178 LMYTSGTTGSPKAVVLSHRSWLRIAETAVRVLGLGDDEVTLHVAPLTHGAGFLLLPTLLL 237
Query: 130 VG---ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 186
G CH +++ AL + +H VT + VP+++ L L W S++++
Sbjct: 238 GGHSLLCH----SYDAGRALRLLTEHGVTGMFMVPSMIRML--LDARPPDWTVPASLRRL 291
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
G + E M+EAT F +LI ++ E+ T + D A GN+
Sbjct: 292 YYAGSPIDPETMREATEVF-AGRLIQSFAQMESPMFFTVLDQKDHL--------HALGNL 342
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPS 301
P G+ P VEL++ D + + G I+ R M YW + A +
Sbjct: 343 -----DSPLVRSAGRVLPGVELRIVDDAGATLPDGAAGEIVARAPQTMNGYWGR-PADTA 396
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ WL TGDIG +D G +++V R+ I +GG NVY EVE VL+ PG+ V+
Sbjct: 397 RTMAGGWLHTGDIGYLDGDGYLYIVDRKKDMIVTGGSNVYAREVEDVLVDLPGVKDAAVI 456
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + E V A + S++ + +L++ CR + L G++ P+
Sbjct: 457 GLPHRIWGEAVTAVL-----------VSANDSRDSDAVLAA------CRTR-LAGYRVPK 498
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRRE 446
V+W + P + GK+ + ++R +
Sbjct: 499 -RVVWVESLPRNAYGKVLKRQLREQ 522
>gi|108803204|ref|YP_643141.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
gi|108764447|gb|ABG03329.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
Length = 520
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 178/384 (46%), Gaps = 50/384 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
I +TSGTTG PKG V++H L + + I + V+L PL HIGG++ + +
Sbjct: 172 FIMYTSGTTGFPKGAVLTHKNLWMNTANWIMEMQVTGGSVWLSGLPLFHIGGVNGVLPFI 231
Query: 129 MVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 186
+G +V P F+ ++ L +E+ VT VPA + + + S++K
Sbjct: 232 YLGGTNVITPSGGFDPEAMLRLMEKERVTHCYFVPA---QWQQFLELDLSRYDLGSLRKA 288
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
L G P +++ +FP ++++A+G TE SS+ TF+ D +
Sbjct: 289 LWGASLAPMRVLEGMAEAFPSVEIVNAFGQTEMSSNTTFLKGEDAVRKMG---------- 338
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPS 301
VG PA +VE+++ D + VG I+ RG V Y + A
Sbjct: 339 -----------SVGLPAVNVEVRIVDDENRDVPEGEVGEIVYRGPTVFKGYHNDPEATAE 387
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
G W +GD+ D G +++V R+ SGGEN+YP EVE V+ HP + + V+
Sbjct: 388 AFEGG-WFHSGDLVRRDGEGYIYVVDRKKDMFISGGENIYPAEVERVISTHPAVAEVAVI 446
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E A V RE + L+ E + +HCR K+L G+K P
Sbjct: 447 GVPHEKWGETPKALVVPREGQR----------------LTREEVIEHCR-KHLAGYKKP- 488
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRR 445
+V + + P + GK+ + E+RR
Sbjct: 489 TYVAFVEELPRNAAGKVLKRELRR 512
>gi|407797844|ref|ZP_11144760.1| AMP-binding domain protein [Salimicrobium sp. MJ3]
gi|407017844|gb|EKE30600.1| AMP-binding domain protein [Salimicrobium sp. MJ3]
Length = 544
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 194/440 (44%), Gaps = 51/440 (11%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVIICF 72
L +P+LR + LG LTA + +K LR T S+ + + + +
Sbjct: 139 LHSEKLPALRNVIVLGDQEYPGCYTWKDLTAKGEEVKDEELREREATLSY--KDVINMQY 196
Query: 73 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVG 131
TSGTTG PKGV++SH ++ + + ++D P H G + A + G
Sbjct: 197 TSGTTGFPKGVMLSHYNIVNNANQVADCMNMTDEDRLCIPVPFFHCFGCVMGTTATVAKG 256
Query: 132 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
A V I +FE K L+AV+ T+L VP + +A L + D+++ + G
Sbjct: 257 ATMVVIEQFEPKLVLQAVKDEACTALHGVPTMF--IAELNHPEFENLKPDTLRTGIMAGS 314
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P E+MK N ++ AYG TE+S +T P+
Sbjct: 315 TCPMEVMKSVINEMGVEEITIAYGQTESSPVIT--------------------QTRPDDP 354
Query: 252 HQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTG 305
+ VG+ P+VE+KV + G + TRG VM Y+ + +
Sbjct: 355 IDLRVKSVGRAHPNVEVKVVEPATGEEAERGMPGELCTRGYLVMEGYYKDEESTETAIDP 414
Query: 306 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 365
+ WL TGDI +D+ G V + GR I GGEN+YP E+E L QHP ++ + VVGI +
Sbjct: 415 DGWLHTGDIAEMDENGYVEITGRMKDMIIRGGENIYPREIEEFLYQHPDVLDVQVVGIPD 474
Query: 366 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 425
A E ++A W + + + S K+ E+ + K P ++
Sbjct: 475 ATYGEEIMA-------WIIPKEDSEVSEKDIRAFFEGEISKH----------KIP-AYIY 516
Query: 426 WRKPFPLTSTGKIRRDEVRR 445
+ +P+T++GKI++ ++R
Sbjct: 517 FTDEYPMTASGKIQKFKLRE 536
>gi|39934832|ref|NP_947108.1| long-chain-fatty-acid--CoA ligase [Rhodopseudomonas palustris
CGA009]
gi|39648682|emb|CAE27204.1| putative long-chain-fatty-acid CoA ligase [Rhodopseudomonas
palustris CGA009]
Length = 525
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 196/439 (44%), Gaps = 65/439 (14%)
Query: 20 IPSLRWHVSLGSSS---SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 76
IPS+R ++ + DF RD ++D + + AP I +TSGT
Sbjct: 126 IPSVRHIITTEGGAPEWQDFTKWRDAQSSDDPQ----------VAIAPSDIAIQLYTSGT 175
Query: 77 TGSPKGVVISHSALIVQSLAKIAIVGYGE------DDVYLHTAPLCHIGGLSSAMAMLMV 130
TG PKG ++SH+ + SL + E DDV L P+ HIGG M +
Sbjct: 176 TGKPKGAMLSHANFL--SLVRAGQDNKPEWNRWSPDDVSLVAMPVFHIGGSGWGMMGIYH 233
Query: 131 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
GA V +F+ L+ EQ +T L VPA M + R ++ R +K +L G
Sbjct: 234 GAKGVIAREFDPTKVLDFFEQSGITKLFMVPAAMQFVVRQPRAREVDFSR--LKYMLYGA 291
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
+P+ L+KE + F K + YGMTET+ ++ + D +E ++ A
Sbjct: 292 SPIPAALLKECIDVF-KCGFVQMYGMTETTGTIVALPPED-HVEGLERMRSA-------- 341
Query: 251 VHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTG 305
GK P VE+ + DG VG I TR M+ YW+ A G
Sbjct: 342 ---------GKALPGVEIAILDPDGKPLPPRQVGEIATRSGSNMVGYWNLPDATKKTIDG 392
Query: 306 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 365
+ WL TGD G +D+ G V++ R I SGGEN+YP EVE+ + HP + + VVG+ +
Sbjct: 393 DNWLRTGDAGYMDEDGYVYIHDRIKDMIISGGENIYPAEVESAICDHPDVAEVAVVGVPD 452
Query: 366 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 425
+ E V A V ++ + + + ++ + + G+K P+ +
Sbjct: 453 DQWGESVKAVVVMKPGKEATAQDIIGFTRTR-----------------IAGYKTPKS-ID 494
Query: 426 WRKPFPLTSTGKIRRDEVR 444
+ P ++GKI R ++R
Sbjct: 495 FIPALPRNASGKILRRQLR 513
>gi|423555308|ref|ZP_17531611.1| O-succinylbenzoate-CoA ligase [Bacillus cereus MC67]
gi|401196712|gb|EJR03650.1| O-succinylbenzoate-CoA ligase [Bacillus cereus MC67]
Length = 496
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 198/433 (45%), Gaps = 56/433 (12%)
Query: 26 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 85
+++L +V + +L+ LK R+ + + IIC+TSGTTG+PKG V+
Sbjct: 112 NMALSMEKESYVQR--VLSIKNLKRIENRNNHYFEDINESASFIICYTSGTTGTPKGAVL 169
Query: 86 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKS 144
+ + +L + D + PL HIGG+ A L G + KFE +
Sbjct: 170 TQKNMFWNALNNTFAIDLTIHDRSIVLLPLFHIGGIGLFAFPTLFAGGIIIIPRKFEPIT 229
Query: 145 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 204
AL +E+H VT ++ VP I L + + T SV+ NGG P EL++E +
Sbjct: 230 ALSMIEKHKVTVVMGVPTIHQALINCSKFEST--NLQSVRWFYNGGAPCPEELIREFID- 286
Query: 205 FPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 263
+ L +GMTETS ++ ++ D + +GKP
Sbjct: 287 --RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------IGKPV 323
Query: 264 PHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 317
+ V DG+ + VG ++ RG +VM YW++ A G WL TGD+ +
Sbjct: 324 LFCDY-VLIDGNKNKVEVGEVGELIIRGPNVMKEYWNRPDATEETIQGG-WLHTGDLAKV 381
Query: 318 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 377
D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG + + E+ +A V
Sbjct: 382 DEDGFVYIVGRKKEMIISGGENIYPLEVEQVINRLSDVCEVAVVGTQHLQWGEIPIAFV- 440
Query: 378 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 437
K+ +L EV++ HC L +K P+ V + P +TGK
Sbjct: 441 --------------VKKSSSVLTEKEVIK-HCL-LFLAKYKIPKEIVFLEE-LPKNATGK 483
Query: 438 IRRDEVRREVMSH 450
I++ ++ ++ S
Sbjct: 484 IQKVQLANQLKSR 496
>gi|149724572|ref|XP_001502813.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Equus caballus]
Length = 615
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 186/398 (46%), Gaps = 60/398 (15%)
Query: 70 ICFTSGTTGSPKGVVISH-----SALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSS 123
I FTSGTTGSPKG +SH +A ++ ++ + E + L T PL H +G +
Sbjct: 260 IQFTSGTTGSPKGATLSHHNIVNNANMIGERLRLPLKMPKELRMVLPT-PLYHCLGSVGG 318
Query: 124 AMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
M + G + P F+ K ALEA+ + + L P + D+ + + D
Sbjct: 319 TMVSMTHGITLILPSPSFDGKKALEAISRERGSFLYGTPTMFVDILN----QPDFSSYD- 373
Query: 183 VKKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
+ +L G G P EL++ N +L+ AYG TE +S +TFM + T+
Sbjct: 374 ISAMLGGVIAGSPAPPELIRAIINKLNMKELVVAYGTTE-NSPVTFMNFAEDTV------ 426
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW 293
Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 427 -------------QEKAESVGRVMPHTEAQIVNTETGTLTKLNTPGELWIRGYCVMLGYW 473
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
+ W TGDI ++D+ G +VGR I GGEN+YP E+E HP
Sbjct: 474 GDPQKTVEAVGQDKWYRTGDIATMDEKGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHP 533
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
+ + VVG+ + RL E + AC+RL++ + ++E ++ C+ K
Sbjct: 534 KVQEVQVVGVKDKRLGEEICACIRLKKGEK----------------TTAEEIKAFCKGK- 576
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 577 IAHFKIPR-YIVFVTEYPLTVSGKIQKFKLREQMEQHL 613
>gi|373857009|ref|ZP_09599752.1| AMP-dependent synthetase and ligase [Bacillus sp. 1NLA3E]
gi|372453255|gb|EHP26723.1| AMP-dependent synthetase and ligase [Bacillus sp. 1NLA3E]
Length = 503
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 193/402 (48%), Gaps = 59/402 (14%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
+ E A+ + +T GTTG PKGVV+SH ++ + + ++DV L + P+ H GGL+
Sbjct: 150 SEEDALTMIYTGGTTGRPKGVVLSHRNILWNGINTVLSWNLTKEDVTLTSMPMFHTGGLN 209
Query: 123 S-AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
++ +L++G V F+ +++ + Q+ + +I VP + L +
Sbjct: 210 VLSIPLLLIGGKVVITDGFDPVQSIQYINQYQCSIVIFVPTMYHMLFQTEEFANS--TFP 267
Query: 182 SVKKILNGGGGLP---SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
S+K L+GG P E+ K +F + YG+TE + F+ DP +
Sbjct: 268 SIKSFLSGGSPCPLDIYEVFKRKGIAFREG-----YGLTEAGPNNFFI---DPVI----- 314
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV-----CSDGSSHVGRILTRGAHVMLRYW 293
+ +G VGKP +K+ C ++ VG +L G HV ++YW
Sbjct: 315 ------------ADEKRG-SVGKPMLFNSIKLINEEGCETEANEVGELLINGKHVFVKYW 361
Query: 294 -DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
++ K ++ G WL TGD+ D+ G ++VGR+ I +GGENVYP+EVE L+ H
Sbjct: 362 KNENATKEAIQAG--WLHTGDLAKRDEQGFFYIVGRKKDMIITGGENVYPQEVEHWLVSH 419
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P I + V+G+ + + E V A V ++ Q +++EL+ +C K
Sbjct: 420 PDIEEVAVIGLPDVKWGEAVTAFVVMK----------GQQIQSRELI-------NYCEFK 462
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
L +K PR F+ + P T GKI + ++ + ++K++
Sbjct: 463 -LGKYKIPRKFIF-VENLPKTPVGKIDKKRLKEIGLEYVKNI 502
>gi|110678441|ref|YP_681448.1| long chain fatty acid acyl-CoA ligase [Roseobacter denitrificans
OCh 114]
gi|109454557|gb|ABG30762.1| putative long chain fatty acid acyl-CoA ligase [Roseobacter
denitrificans OCh 114]
Length = 565
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 193/444 (43%), Gaps = 49/444 (11%)
Query: 16 QHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLP-FTHSWAPEGAVIICFTS 74
Q +P LR + G + D L A G S+ +L ++ +P+ A+ I FTS
Sbjct: 160 QAARVPMLRHVIVTGDAPPAGTTGFDALCA-AGSGVSVETLDQISNDLSPQDAINIQFTS 218
Query: 75 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 134
GTTGSPKG ++H ++ + + + E D P H G+ +
Sbjct: 219 GTTGSPKGACLTHHNIVNNAHFVTQTMQFTEADRLCIPVPFYHCFGMVMGTLGCVSKGAT 278
Query: 135 VFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
+ IP F++++ LEAV + T+L VP + + L S++ + G
Sbjct: 279 MVIPGEGFDARTTLEAVTREKCTALYGVPTMFVNALELADFDAF--DLSSLRTGIMAGAP 336
Query: 193 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 252
P E+M++ + AYGMTETS ++F + D LE
Sbjct: 337 CPIEVMRQVQARMHMHGVTIAYGMTETSP-VSFQSNVDDPLEK----------------- 378
Query: 253 QPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV 307
+ VG+ PHVE+K+ + V G +LTRG VML YW+ + +
Sbjct: 379 --RVSSVGRIHPHVEVKIVDATGNTVKTGEQGELLTRGYSVMLGYWEDDAQTAASIDAQG 436
Query: 308 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 367
W+ TGD+ +D G + GR I GGEN+YP E+E L HP I+ V GI + +
Sbjct: 437 WMHTGDLARLDADGFCTITGRLKDMILRGGENIYPREIEEFLYTHPDILQAQVFGIPDHK 496
Query: 368 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 427
L E V A + R +E++ ++ CR + FK P +V ++
Sbjct: 497 LGEAVCAWIVARAGSDLTETD----------------VQDFCRSA-IAHFKVP-AYVSFK 538
Query: 428 KPFPLTSTGKIRRDEVRREVMSHL 451
P+T TGK ++ +R ++ L
Sbjct: 539 DELPMTVTGKPQKFVMRDRMVKEL 562
>gi|448301120|ref|ZP_21491115.1| long-chain-fatty-acid--CoA ligase [Natronorubrum tibetense GA33]
gi|445584634|gb|ELY38949.1| long-chain-fatty-acid--CoA ligase [Natronorubrum tibetense GA33]
Length = 523
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 174/377 (46%), Gaps = 42/377 (11%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAM 127
++ +TSGTTG PKGV+ SH ++ +L + DV + PL H+G L + +
Sbjct: 174 LLLYTSGTTGRPKGVLHSHRTVVNAALVSLPYNRLRPTDVNVALGPLYHVGPLLCNVLPA 233
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 185
L VGAC+V +F+ + LE +E +T++ VP + L + + + RD V+
Sbjct: 234 LNVGACNVVQHEFDPATTLERIESEGITTMWGVPTHVRALVD----EPSIEDRDIEHVRM 289
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTE-TSSSLTFMTLYDPTLETPGQL-PQAF 243
I G +P+ + K A + + ++AYG TE +L + +D L + GQ P A
Sbjct: 290 IQYSGAAMPAAVAKRARDHVSDCEFVNAYGTTEIVFGTLIYPEFHDDKLGSIGQAAPNAA 349
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 303
V + P V + VG +L + ML YW A V+
Sbjct: 350 VRVVDSENPVPNAVV---------------DTDEVGELLVNASTCMLEYWRDPEAT-DVA 393
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W TGD+G D+ G ++ V R++ I SGGEN+YP EVE +L HP ++ VVG+
Sbjct: 394 IVDGWYRTGDLGRRDEDGFLYFVDRKDDMIVSGGENIYPAEVEDLLHGHPDVVSGAVVGV 453
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ E+V A V + D SS + E + L FK PR +
Sbjct: 454 PDDEWGEVVTAFV--------VPATEDLSSDDLEAFFVA--------SDELESFKRPRQY 497
Query: 424 VLWRKPFPLTSTGKIRR 440
V + + P TS+ KI R
Sbjct: 498 V-FEQELPKTSSDKIDR 513
>gi|224825723|ref|ZP_03698827.1| AMP-dependent synthetase and ligase [Pseudogulbenkiania
ferrooxidans 2002]
gi|224601947|gb|EEG08126.1| AMP-dependent synthetase and ligase [Pseudogulbenkiania
ferrooxidans 2002]
Length = 562
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 198/445 (44%), Gaps = 49/445 (11%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 74
L+ +P+L + +G +S + + L A+ + + + + I FTS
Sbjct: 151 LRAARLPTLEMVIRMGDEASPGMLNFNQLLAEPTEAERAMLAETGTTLQFDDPINIQFTS 210
Query: 75 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGAC 133
GTTGSPKG +SH ++ + D PL H G+ +A L G
Sbjct: 211 GTTGSPKGATLSHHNILNNGFFVGEAMKLVPGDRLCIPVPLYHCFGMVLGNLACLTHGTT 270
Query: 134 HVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
+F + FE + L+ V + T+L VP + ++ L + + +++ + G
Sbjct: 271 MIFPSEAFEPLAVLQTVAEEKCTALHGVPTMF--ISVLDHPRFSEFDLSTLRTGIMAGSP 328
Query: 193 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 252
P E+MK ++ ++ AYGMTETS P +F + T V
Sbjct: 329 CPIEVMKRVVDTMHMKEVTIAYGMTETS-------------------PVSFQSATDTPVE 369
Query: 253 QPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGE 306
+ VG PH+E+K+ DG + G +LTRG VML YWD
Sbjct: 370 RKVST-VGLIHPHLEVKIV-DGEGRIVPRGETGELLTRGYSVMLGYWDDEPKTREAIDPA 427
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
W+ TGD+ ID+ G +VGR + GGENVYP E+E L +HP I + V+G+ +
Sbjct: 428 GWMHTGDLAVIDEAGYCNIVGRAKDMVIRGGENVYPREIEEFLYRHPKIQDVQVIGVPDD 487
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
R E + A +RLR+ S++ +R C + + +K PR ++ +
Sbjct: 488 RFGEELCAWIRLRDGET----------------ASADEIRAFC-QGQIAHYKIPR-YIEF 529
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHL 451
FP+T TGKI++ +R+++ L
Sbjct: 530 VDSFPMTITGKIQKFMMRQQMKEKL 554
>gi|420149135|ref|ZP_14656316.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394754197|gb|EJF37638.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 542
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 188/434 (43%), Gaps = 59/434 (13%)
Query: 22 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 81
SLR V G S F+ + +T + L L F + V I +TSGTTG+PK
Sbjct: 146 SLRKEVYWGESWEYFLAHGEKVTDEKL-------LSFEERVQFDDPVNIQYTSGTTGNPK 198
Query: 82 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK-- 139
GV +SH ++ + Y E D P H G+ + IP
Sbjct: 199 GVTLSHHNILNNGYFIGIRMNYTEKDRVCIPVPFYHCFGMVIGNIACTTHGATMVIPNDS 258
Query: 140 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 199
F++ LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 259 FDATKTLEAVEKEKCTSLYGVPTMF--ISELYVLDKQPYDLSSLRTGVMAGALCPPEIMK 316
Query: 200 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 259
++ YGMTETS P G +H V
Sbjct: 317 RVKEQMNMHEITICYGMTETS---------------PVSTQTKIGAPFEKQIHS-----V 356
Query: 260 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 313
G H+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD
Sbjct: 357 GTIHDHLEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATQQVIDEQRWMHSGD 416
Query: 314 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 373
+ +DD G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+
Sbjct: 417 LAMMDDDGYIHISGRIKDLIIRGGENISPKEIEDFLYTYKGVMDAQVIGVPSKKYGEEVM 476
Query: 374 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFP 431
A ++ +E + L+ E L C+ + + +K PR W+ + FP
Sbjct: 477 AWIKPKEG----------------VTLTEEELHDFCKGR-IAHYKVPR---YWKFVEEFP 516
Query: 432 LTSTGKIRRDEVRR 445
+T +GKIR+ E+R
Sbjct: 517 MTISGKIRKVEMRE 530
>gi|288555310|ref|YP_003427245.1| fatty acyl CoA synthase [Bacillus pseudofirmus OF4]
gi|288546470|gb|ADC50353.1| fatty acyl CoA synthase [Bacillus pseudofirmus OF4]
Length = 528
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 184/381 (48%), Gaps = 35/381 (9%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG+PKGV+++H + + +L+ + + D LH P+ H+ G S
Sbjct: 169 ILYTSGTTGNPKGVMLTHRSNYLHALSTQHHLRVSDQDTLLHVLPMFHVNGWGSPFYYTA 228
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
GA V + K + K+ E +E++ VT P ++ L + + K RD+++ ++ G
Sbjct: 229 NGATQVMLRKIDPKTIFEKIEKNGVTVAHMAPTVLNMLLEYAKTENVPK-RDNMRVVIAG 287
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
P+ + + + I YGMTE+S +T + L +F +
Sbjct: 288 SAPPPAFVTR--VEEELGWEFIQVYGMTESSPLVTTSQIRSEQL--------SFDDAAKA 337
Query: 250 SVHQPQGVC-VG---KPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 305
+ G +G K KV +DG S +G I+ R VM YW A S +
Sbjct: 338 RLKAKTGYSMIGSKLKVVNEYGEKVAADGKS-IGEIVVRSNGVMEGYWKNPDAT-SETIR 395
Query: 306 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 365
+ WL TGD+ ++D+ G + +V R+ I SGGEN+ EVE VL +HP ++ V+ + +
Sbjct: 396 DGWLHTGDMATVDEHGYMEIVDRKKDVIISGGENISSIEVEGVLYEHPAVLEAAVIAVPH 455
Query: 366 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 425
+ E+ A V LRE Q +E Q +++K + FKAP+ V+
Sbjct: 456 EKWGEVPHAVVVLREGHQLTEEEVIQFARSK-----------------MAHFKAPK-SVV 497
Query: 426 WRKPFPLTSTGKIRRDEVRRE 446
+ + P T++GKI++ ++R+E
Sbjct: 498 FAEALPKTASGKIQKVQIRKE 518
>gi|429749086|ref|ZP_19282231.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429169054|gb|EKY10839.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 543
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 191/434 (44%), Gaps = 59/434 (13%)
Query: 22 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 81
SLR V G F+ K ++ + LK Y + + F + V I +TSGTTG+PK
Sbjct: 145 SLRKEVFWGEEWQRFLEKGKKISDEKLKEYEDK-VQF------DDPVNIQYTSGTTGNPK 197
Query: 82 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK-- 139
GV +SH ++ + + Y E D P H G+ + IP
Sbjct: 198 GVTLSHHNILNNAYFIGIRMNYTEKDRVCIPVPFYHCFGMVIGNLCCTSHGATMVIPNDS 257
Query: 140 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 199
F++ LEAVE+ TSL VP + ++ L + + S++ + G P E+MK
Sbjct: 258 FDATRTLEAVEKERCTSLYGVPTMF--ISELYVLDRHPYDLSSLRTGVMAGALCPPEIMK 315
Query: 200 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 259
++ YGMTETS P G +H V
Sbjct: 316 RVKEQMNMHEITICYGMTETS---------------PVSTQTKIGAPFEKQIHS-----V 355
Query: 260 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 313
G H+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD
Sbjct: 356 GTIHDHLEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATAQVIDEQRWMHSGD 415
Query: 314 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 373
+ +DD G V + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+
Sbjct: 416 LAMMDDDGYVHISGRIKDLIIRGGENISPKEIEDFLYTYEGVMDAQVIGVPSKKFGEEVM 475
Query: 374 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFP 431
A ++ +E + L+ E L C+ + + +K PR W+ + FP
Sbjct: 476 AWIKPKEG----------------VTLTEEELHNFCKGR-IAHYKVPR---YWKFVQEFP 515
Query: 432 LTSTGKIRRDEVRR 445
+T +GKIR+ E+R
Sbjct: 516 MTISGKIRKVEMRE 529
>gi|153001163|ref|YP_001366844.1| AMP-binding domain-containing protein [Shewanella baltica OS185]
gi|160875833|ref|YP_001555149.1| AMP-binding domain-containing protein [Shewanella baltica OS195]
gi|217972916|ref|YP_002357667.1| AMP-binding domain-containing protein [Shewanella baltica OS223]
gi|378709035|ref|YP_005273929.1| AMP-dependent synthetase and ligase [Shewanella baltica OS678]
gi|418024593|ref|ZP_12663575.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS625]
gi|151365781|gb|ABS08781.1| AMP-dependent synthetase and ligase [Shewanella baltica OS185]
gi|160861355|gb|ABX49889.1| AMP-dependent synthetase and ligase [Shewanella baltica OS195]
gi|217498051|gb|ACK46244.1| AMP-dependent synthetase and ligase [Shewanella baltica OS223]
gi|315268024|gb|ADT94877.1| AMP-dependent synthetase and ligase [Shewanella baltica OS678]
gi|353535879|gb|EHC05439.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS625]
Length = 570
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 195/445 (43%), Gaps = 47/445 (10%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
+LQ A+P L + + +G+ S + D L D+ + +P ++ I FT
Sbjct: 160 QLQAKAVPELEFVIRMGAEKSVGMLNFDDLLVDVTADDKAALESIGKALSPYDSINIQFT 219
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGA 132
SGTTGSPKG +SH ++ + + D PL H G+ ++ L GA
Sbjct: 220 SGTTGSPKGATLSHHNILNNGYLVAEAMKFTCHDKLCIPVPLYHCFGMVLGSLVCLAKGA 279
Query: 133 CHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
VF + F+ + L+ +EQ T+L VP + +A L + T S++ + G
Sbjct: 280 AAVFPGESFDPLTTLQVIEQEGCTALHGVPTMF--IAELEHPEFTRFDLSSLRTGVMAGA 337
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P E+M+ N +++ YG TE S L +T D +E
Sbjct: 338 TCPEEVMRRVQNLMYMKEVLIGYGQTE-CSPLNHITEIDSPVEK---------------- 380
Query: 252 HQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 306
+ + VG+ PH E+K+ + + G + +RG +M YW+ +
Sbjct: 381 ---RVLTVGRALPHTEVKIVDEFGEVLPVNQPGEVCSRGYCIMQCYWNDPEKTAATIDSA 437
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
WL +GDIG +D+ G V +VGR I GGEN+YP E+E L H + V G+ +
Sbjct: 438 GWLHSGDIGQMDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVQSD 497
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E V A +++R +E + +R EK FK PR ++ +
Sbjct: 498 KYGEEVCAWIKVRSGSAITEDD----------------IRHFLTEK-FAYFKVPR-YIKF 539
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHL 451
+P+T TGKI++ ++R + L
Sbjct: 540 VDQYPMTVTGKIQKFKMRELMYQEL 564
>gi|403722609|ref|ZP_10945108.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
gi|403206504|dbj|GAB89439.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
Length = 543
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 173/397 (43%), Gaps = 49/397 (12%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IG 119
S P+ + I +TSGTTG PKG ++H + ++ Y + D P H G
Sbjct: 178 SLTPDDPINIQYTSGTTGFPKGATLTHRNIANNGYLVGELINYTDADRICLPVPFYHCFG 237
Query: 120 GLSSAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
+ +A GA V P F+ + L AV ++ TSL VP + L+
Sbjct: 238 MVMGNLAATSHGAAMVIPAPAFDPAATLRAVSEYRCTSLYGVPTMFIAELALLDSHGDAS 297
Query: 179 GRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
D S++ + G P M++ + ++ YGMTETS T + DP
Sbjct: 298 DYDLSSLRTGIMAGSPCPEHTMRQVVDRMHMREVSICYGMTETSPVSTQTRIDDPLELRV 357
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVML 290
G VG+ PH+E+KV + G TRG VM
Sbjct: 358 G--------------------TVGRVGPHLEIKVVDPATGETLRRGETGEFCTRGYSVMK 397
Query: 291 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 350
YW+Q + W+ TGD+ +DD G V + GR + GGEN+YP E+E L
Sbjct: 398 GYWNQPEKTAEAIDTDGWMHTGDLAVMDDNGYVRITGRIKDMVIRGGENIYPREIEEFLY 457
Query: 351 QHPGIIGIVVVGIANARLTEMVVACVRLRESW-QWSESNCDQSSKNKELLLSSEVLRQHC 409
HP I+ V+G+ +A+ E ++A VRLR+ ++E + + + K + +H
Sbjct: 458 THPDILDAQVIGVPDAKYGEELMAWVRLRDGVSDFTEDDLREFATGK--------IARH- 508
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
K PR +V K FP+T TGK+R+ ++R E
Sbjct: 509 --------KIPR-YVHVVKDFPMTVTGKVRKVQMRAE 536
>gi|297622914|ref|YP_003704348.1| AMP-dependent synthetase and ligase [Truepera radiovictrix DSM
17093]
gi|297164094|gb|ADI13805.1| AMP-dependent synthetase and ligase [Truepera radiovictrix DSM
17093]
Length = 521
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 180/389 (46%), Gaps = 54/389 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE----DDVYLHTAPLCHIGGLSSA 124
+I +TSGTTG PKG ++H +++ ++ +V + D V+L PL H+ G + A
Sbjct: 173 VILYTSGTTGQPKGAELTHLNMVMNAVVGARLVERPQLAQKDQVFLAVLPLFHVFGQTCA 232
Query: 125 M-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
M AM G V +P+F+ ++AL + VT+ VP + L ++ S+
Sbjct: 233 MNAMFYSGGQIVLMPRFDPEAALRLMRATGVTTFAGVPTMYWGLLNAVKAAGGDPEVSSL 292
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ L+GG +P EL++ +F + ++ YG++ETS F
Sbjct: 293 QICLSGGSAMPVELLRRFEETF-RVPILEGYGLSETSPIACF------------------ 333
Query: 244 GNVTPNSVHQPQGV-CVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFL 297
N +P+ V +G+ VELKV + + G ++ RG +VM Y+ +
Sbjct: 334 -----NHADRPRKVGSIGQAVFGVELKVVDERDQELPPGEPGELVVRGHNVMKGYYGRPE 388
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
A G W TGD+ + D+ G +V R I GG NVYP EVE VL+ HP +
Sbjct: 389 ATAEAMRGG-WFHTGDVATRDEDGYFTIVDRLKDMIIRGGFNVYPREVEEVLMTHPEVSL 447
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
VVG+ + + E V A V L+E L+ E LR +E+ L +
Sbjct: 448 AAVVGVPDEQYGEEVKAFVVLQEGSS----------------LTPEGLRDWSKER-LAAY 490
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
K PR V K P+ +TGKI R E+R +
Sbjct: 491 KYPRQ-VEVVKSLPMNATGKILRRELRAQ 518
>gi|398820950|ref|ZP_10579446.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. YR681]
gi|398228393|gb|EJN14519.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. YR681]
Length = 518
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 176/381 (46%), Gaps = 40/381 (10%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG KGV++SH L+ +L + + YLH AP+ H+ ++ ++++
Sbjct: 162 IFYTGGTTGRSKGVMLSHRNLMANALNALGEGLFPASTTYLHAAPMFHLANGAAMYSLML 221
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G +V + F + + A++ VT ++ VP ++ + S+K ++ G
Sbjct: 222 SGGSNVIVQGFTPEGVMVAMQNERVTDVLLVPTMIQMFVDHPAIGNY--DLSSLKHVIYG 279
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ ++ A + P + AYGMTE S T + + G
Sbjct: 280 ASPISEAVLDRAARALPHVRFTQAYGMTELSPIATLL-----------HADEHVGEGRRK 328
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
H+ G+ E+++ + + VG I+ RG VM+ YW++ L + + +
Sbjct: 329 GRHR----GAGRATLGCEVRIVDENDQPVPAGSVGEIVVRGDTVMMGYWER-LEETARAV 383
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
+ W+ TGD G +D+ G +++V R I SGGENVY EVE L QHP ++ V+G+
Sbjct: 384 VDGWMHTGDGGYMDEDGFIYVVDRVKDMIISGGENVYSIEVENALAQHPLVLQCAVIGVP 443
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
N + E V A V R + S S EL+ ++ L + G+K PR
Sbjct: 444 NEQWGEQVHAVVVKRSGVEVSPS---------ELIEFTKTL--------IAGYKCPRSIE 486
Query: 425 LWRKPFPLTSTGKIRRDEVRR 445
+ P PL+ GK+ + E+RR
Sbjct: 487 ITETPLPLSGAGKVLKRELRR 507
>gi|333924075|ref|YP_004497655.1| long-chain-fatty-acid--CoA ligase [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749636|gb|AEF94743.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 554
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 200/457 (43%), Gaps = 55/457 (12%)
Query: 6 ESSDSWYLELQHTAIPSLRWHVSLGSSS-SDFVNKRDMLT-ADILKGYSLRSLPFTHSWA 63
E DS +L +P L+ + +G + + N RD+L A+ + L + S
Sbjct: 131 ELRDSQPGQLNSARLPMLKNVIFIGEDTPAGMWNWRDILAMANQVTDEELDAR--QASLD 188
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLS 122
P+ + + +TSGTTG PKGV+++H +I + + + + E D P H G +
Sbjct: 189 PDDCINMQYTSGTTGFPKGVMLTHFNIINNAHSIADCMNFTEQDKLCIPVPFFHCFGCVL 248
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
M ++ GA V + F LE +EQ T++ VP + + L + K S
Sbjct: 249 GTMTCVVSGATMVPVEVFHPVRVLETIEQERCTAVHGVPTMF--IMELEELNKKKYDTSS 306
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + G P E+MK N ++ YG TE S ++T DP
Sbjct: 307 LRTGIMAGSPCPIEVMKAVVNRMGAREITITYGQTEASPAITMTRTDDPI---------- 356
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYWD 294
+ VG+ P+VE K+ C G G I RG +VM Y+
Sbjct: 357 ----------DLRVTTVGRTIPNVEAKILDPETGAECPPGVQ--GEICARGYNVMKGYYK 404
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
A WL TGD+G +D G + GR I GGEN+YP E+E L HP
Sbjct: 405 MPEATAQAIDANGWLHTGDLGVMDHNGYFKITGRLKDMIIRGGENIYPREIEEFLYTHPL 464
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ + VVG+ +A+ E V+A ++ +E L+ E ++ +C+ K +
Sbjct: 465 VKDVQVVGVPSAKYGEEVLAFIQPKEGAN----------------LTKEEIQAYCQNK-I 507
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+K P +VL+ +P T++GK+++ +R + + L
Sbjct: 508 AKYKIPS-YVLFTDSYPTTASGKVQKYRLREKAIREL 543
>gi|39933535|ref|NP_945811.1| AMP-binding protein [Rhodopseudomonas palustris CGA009]
gi|39647381|emb|CAE25902.1| possible fatty acid-CoA ligases [Rhodopseudomonas palustris CGA009]
Length = 517
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 198/447 (44%), Gaps = 53/447 (11%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 74
LQ +P LR + +G + D + A + + F + AV I FTS
Sbjct: 106 LQSAKLPKLRTVIQIGGPKAPGTIAFDEVAAMGGARHRDQIAAFASELQFDDAVNIQFTS 165
Query: 75 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGAC 133
GTTGSPKGV ++H ++ + E D PL H G + +A + GA
Sbjct: 166 GTTGSPKGVTLTHHNILNNGYFVGRAMKLTEADRICIPVPLYHCFGMVMGNLASVTSGAA 225
Query: 134 HVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
V+ + F+ L+ + T+L VP + +A L + S++ + G
Sbjct: 226 MVYPGEGFDPLVTLQTASREKCTALYGVPTMF--IAELDHPEFASFDLSSLRTGIMAGAP 283
Query: 193 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 252
P E+M+ ++ ++ AYGMTETS P +F ++V
Sbjct: 284 CPVEVMRRVNDAMNMREVTIAYGMTETS-------------------PVSF----QSAVD 320
Query: 253 QPQG---VCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLAKPSVST 304
P+ VG+ PHVE+KV DG G + TRG VML YWD+ V
Sbjct: 321 DPEDRRVSTVGRIHPHVEVKVVDLDGKIVPRGQRGELCTRGYSVMLGYWDEAEKTADVLD 380
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +HP I + + G+A
Sbjct: 381 AAGWMHTGDLATIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQDVQIFGVA 440
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ R E + A VR R L+++ +R C + + K PR ++
Sbjct: 441 DDRYGEELCAWVRPRPGE----------------TLTADDVRAFC-QGQIAHNKIPR-YI 482
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMSHL 451
+ FP+T TGKI++ +R +V S L
Sbjct: 483 EFVDEFPMTVTGKIQKFIMREKVESKL 509
>gi|320449640|ref|YP_004201736.1| long-chain-fatty-acid--CoA ligase [Thermus scotoductus SA-01]
gi|320149809|gb|ADW21187.1| long-chain-fatty-acid--CoA ligase [Thermus scotoductus SA-01]
Length = 548
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 183/387 (47%), Gaps = 52/387 (13%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSL-AKIAIVGYGE-DDVYLHTAPLCHIGGLSSAMAMLM 129
+T GTTG KG +++H L +L + I + E ++V L P H+ G++ AM + +
Sbjct: 203 YTGGTTGVAKGAMLTHRNLSSNALQVRSWIPDFQEGEEVVLGAIPFFHVYGMTVAMNLAL 262
Query: 130 VGACH-VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+GA V +P+ E K +EA+E+H VT VP + ++K + S++ ++
Sbjct: 263 LGAAKLVLLPRPEIKPIVEAIEKHRVTLFPGVPTLYVAFNNFPGIEK--RNLRSIRACIS 320
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G LP E+ + AKL+ YG+TE S P
Sbjct: 321 GSAPLPLEVA-DRFERLTGAKLVEGYGLTEAS----------PVTHC------------- 356
Query: 249 NSVHQPQGV-CVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSV 302
N +H + + VG P P VE KV + VG ++ +G ++M YW++ +
Sbjct: 357 NPLHGVRKLGSVGLPFPGVEAKVVDEEGKEVPMGEVGELVVKGPNIMKGYWNR-PEETQK 415
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ + WL TGD+ +D G ++V R+ I +GG N+YP EVE VL QH + VVG
Sbjct: 416 ALKDGWLFTGDMARMDQDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQEAAVVG 475
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + E V A + L+E ++ + D + CR+ NL +K PR+
Sbjct: 476 VPDPYRGETVAAFIVLKEGYKGKVTEKD--------------IEAFCRQ-NLAAYKVPRI 520
Query: 423 FVLWRKPFPLTSTGKIRRDEVRREVMS 449
+ +R P TS GKI + E+ +E+ +
Sbjct: 521 -IEFRDSLPKTSVGKILKRELTKEIAA 546
>gi|374607766|ref|ZP_09680566.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
gi|373554328|gb|EHP80907.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
Length = 542
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 190/440 (43%), Gaps = 55/440 (12%)
Query: 21 PSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 79
P L+ + LG+ D + + D + AD L+ + SL + I +TSGTTG
Sbjct: 142 PQLQEVLYLGTDDWRDLIERTDAVAADDLRA-RMNSLDHHQP------INIQYTSGTTGF 194
Query: 80 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVGACHVF-I 137
PKG +SH ++ ++ +G D P H G+ + GA V
Sbjct: 195 PKGATLSHCNILNNGYFTTELINFGPTDRLCIPVPFYHCFGMVMGNLGCTSHGATMVIPA 254
Query: 138 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 197
P F+ L+A+E+ T + VP + +A L + + S++ + G P E+
Sbjct: 255 PAFDPALTLDAIEKERCTGVYGVPTMF--IAMLGQPDLAQRDLSSLRTGVMAGSVCPVEV 312
Query: 198 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 257
MK + ++L AYGMTETS ++ T D LE +
Sbjct: 313 MKRCVSDMNASELAIAYGMTETSP-VSCQTRIDDDLER-------------------RTS 352
Query: 258 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 311
+G+ PHVE+K+ + V G TRG VM+ YW+ + W+ T
Sbjct: 353 SIGRAHPHVEIKIVDAETGEVVERGQTGEFCTRGYSVMIGYWEDEAKTAESIDDDGWMHT 412
Query: 312 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 371
GD+ + D G +VGR + GGEN+YP E+E L HP + V+G+ + + E
Sbjct: 413 GDLAVMRDDGYCNIVGRIKDMVIRGGENIYPREIEEFLYTHPDVDDAQVIGVPDEKYGEE 472
Query: 372 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 431
+ A VR+ K + + + LR K L +K PR +V FP
Sbjct: 473 ICAWVRM---------------KPGKGPVDARALRDFATGK-LAHYKIPR-YVHVVDEFP 515
Query: 432 LTSTGKIRRDEVRREVMSHL 451
+T TGK+R+ E+R E + L
Sbjct: 516 MTVTGKVRKVEMRAETVKLL 535
>gi|440699134|ref|ZP_20881436.1| AMP-binding domain protein [Streptomyces turgidiscabies Car8]
gi|440278386|gb|ELP66431.1| AMP-binding domain protein [Streptomyces turgidiscabies Car8]
Length = 527
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 138/434 (31%), Positives = 193/434 (44%), Gaps = 64/434 (14%)
Query: 21 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 80
P LR V +G S D + R +PF + + + I +TSGTTG P
Sbjct: 142 PQLRETVFIGDPSWDALLARGT------------PVPFPE-LSCDDPINIQYTSGTTGFP 188
Query: 81 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IP 138
KG +SH ++ + Y E D P H G+ +A GAC V P
Sbjct: 189 KGATLSHHNILNNGYFVGESISYTEQDRVCVPVPFYHCFGMVMGNLAATSHGACVVIPAP 248
Query: 139 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 198
FE + L AV + TSL VP + +A L S++ + G P E+M
Sbjct: 249 SFEPAATLRAVAEERCTSLYGVPTMF--IAELNLPDFATYDLSSLRTGIMAGSPCPVEVM 306
Query: 199 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 258
K A++ YGMTETS ++ T D LE H+
Sbjct: 307 KRVVAEMHMAEVSICYGMTETSP-VSLQTRRDDDLE-----------------HRTG--T 346
Query: 259 VGKPAPHVELKVC--SDGSSH----VGRILTRGAHVMLRYWDQ-FLAKPSVSTGEVWLDT 311
VG+ PH+E+KV ++G++ G + TRG VML YW + SV G W+ T
Sbjct: 347 VGRVLPHIEVKVVDPANGTTQPRGTAGELCTRGYSVMLGYWQEPEKTAESVDPGR-WMHT 405
Query: 312 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 371
GD+ + + G V +VGR I GGEN+YP E+E L HP I + VVG+ + R E
Sbjct: 406 GDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADVQVVGVPHERYGEE 465
Query: 372 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRKPF 430
V+ACV E + E L +E L+ C E L +K P RL VL F
Sbjct: 466 VLACVIPHE--------------DTEPLTLAE-LQAFC-EGRLAHYKIPSRLRVL--DAF 507
Query: 431 PLTSTGKIRRDEVR 444
P+T +GK+R+ E+R
Sbjct: 508 PMTVSGKVRKVELR 521
>gi|433459238|ref|ZP_20417071.1| AMP-dependent synthetase and ligase [Arthrobacter crystallopoietes
BAB-32]
gi|432191472|gb|ELK48421.1| AMP-dependent synthetase and ligase [Arthrobacter crystallopoietes
BAB-32]
Length = 545
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 177/391 (45%), Gaps = 47/391 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG ++H ++ + ++GY +D + P H G+ +
Sbjct: 193 IQYTSGTTGFPKGATLTHRNILNNGFSIGELMGYTPEDRVVLPVPFYHCFGMVIGNLNIY 252
Query: 130 VGACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+P F + L+AV+ H TSL VP + +A L +++ +
Sbjct: 253 SHGAAAILPGRSFSAADTLQAVQDHRGTSLYGVPTMF--IAELALEDFADYDLSTLRTGV 310
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK + ++ YGMTETS P + +
Sbjct: 311 MAGSPCPVEIMKRVISDMNMGEVAICYGMTETS-------------------PVSTMTRS 351
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPS 301
+S+ + + VG+ PH+E ++ + +G + TRG VM YW++
Sbjct: 352 EDSISR-RTSTVGRTMPHLESRIVDTQTGETTERGVIGELHTRGYSVMQGYWNEPEKTAL 410
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ W+ TGD+ S+D+ G + + GR + GGEN+YP E+E L QHP I + V+
Sbjct: 411 AVDQDGWMHTGDLASMDEDGYITIEGRMKDMVIRGGENIYPREIEDFLYQHPDIQDVQVI 470
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E ++AC+ LR L++E + C+ + L FK P+
Sbjct: 471 GVPDEKYGEELMACIVLRPGAPE---------------LTAEDIAAFCQGR-LAHFKIPK 514
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
V R FP+T +GK+R++++R E L+
Sbjct: 515 C-VEVRADFPMTVSGKVRKEQMREEAAEKLR 544
>gi|407278946|ref|ZP_11107416.1| long-chain-fatty-acid--CoA ligase [Rhodococcus sp. P14]
Length = 518
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 177/388 (45%), Gaps = 43/388 (11%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
A E ++ ++SGTTG PKGV ++H L + +A++ + + D L PL H+GG
Sbjct: 157 AAETTALLLYSSGTTGRPKGVQLTHRNLFAHAEDVLAVLPFTDGDCLLVAMPLFHVGGTC 216
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
A+ + G VF + ++ S + + + P I A LA R +
Sbjct: 217 YAVMGIHDGRRCVFTREADAPSLFGGLAAGANIAFLVPPVIAAVLAAGERAIGAFA---R 273
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
+K+I G +P L++ A ++P K + YGMTE + +T + LP
Sbjct: 274 LKRITYGAAPMPLPLLRGALAAWPDTKFVQVYGMTELAGVITAL------------LP-- 319
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQF 296
+V + + + G P P VE++V + +G + R A YW++
Sbjct: 320 --DVHRDPAQERRMASAGTPIPGVEMRVVDPATLEDVAPGGIGELWWRSAQTTPGYWNRP 377
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
A T + WL +GD+G +DDGG V++ R I +GGENVY EVE VL++HP +
Sbjct: 378 DATAETITPDGWLRSGDMGRVDDGGFVFIEDRLKDMIITGGENVYCPEVERVLVEHPAVA 437
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ V+G+ + + E V A V L DQ + +EL+ + R+H L
Sbjct: 438 EVAVIGVPDEKWGETVKAVVVLAP---------DQKADEQELV---DYTRRH-----LAH 480
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
FK P + P TGKI + +R
Sbjct: 481 FKCPSSIDIVDM-LPRNPTGKILKRSLR 507
>gi|312110768|ref|YP_003989084.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y4.1MC1]
gi|311215869|gb|ADP74473.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y4.1MC1]
Length = 544
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 185/401 (46%), Gaps = 53/401 (13%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IG 119
S P + + +TSGTTG PKGV+++H ++ + + ++D P H G
Sbjct: 183 SLDPHDVINMQYTSGTTGFPKGVMLTHYNIVNNAYNIAQCMKLTKEDRLCIPVPFFHCFG 242
Query: 120 GLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
+ +A + VGA V I +F K L+ V+ T+L VP + +A L
Sbjct: 243 CVLGTLACVSVGATMVPIQEFNPKQVLQTVQDEKCTALHGVPTMF--IAELNDPDFEKYD 300
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT---LETP 236
S++ + G P E+MK ++ AYG TE+S +T DP +ET
Sbjct: 301 LSSLRTGIMAGSPCPIEVMKAVMEKMGAKEITIAYGQTESSPVITQTRTDDPIHIRVET- 359
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVML 290
VG+ P+VE+K+ ++ G + TRG HVM
Sbjct: 360 ----------------------VGRALPNVEVKIVDPSTNKEVPPGVQGELCTRGYHVMK 397
Query: 291 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 350
Y+ A V + WL TGD+ +D+ G + GR I GGEN+YP E+E L
Sbjct: 398 GYYKNPGATKEVIDEDGWLHTGDLAVMDENGYCRITGRLKDMIIRGGENIYPREIEEFLY 457
Query: 351 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 410
+HP I+ + VVG+ + + E V+A + L+E Q++ ++E +R+ CR
Sbjct: 458 KHPKILDVQVVGVPDEKYGEEVMAWIILKEG---------QTA-------TAEEIREFCR 501
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
K ++ K PR ++ + +P+T++GKI++ ++R L
Sbjct: 502 GK-ISRHKIPR-YIEFTDSYPMTASGKIQKFKLREMAKQRL 540
>gi|126174820|ref|YP_001050969.1| AMP-binding protein [Shewanella baltica OS155]
gi|386341573|ref|YP_006037939.1| long-chain-fatty-acid--CoA ligase [Shewanella baltica OS117]
gi|125998025|gb|ABN62100.1| AMP-dependent synthetase and ligase [Shewanella baltica OS155]
gi|334863974|gb|AEH14445.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS117]
Length = 570
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 194/445 (43%), Gaps = 47/445 (10%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
+LQ A+P L + + +G+ S + D L D+ + +P A+ I FT
Sbjct: 160 QLQAKAVPELEFVIRMGAEKSVGMLNFDDLLVDVTADDKAALESIGKALSPYDAINIQFT 219
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGA 132
SGTTGSPKG +SH ++ + + D PL H G+ ++ L GA
Sbjct: 220 SGTTGSPKGATLSHHNILNNGYLVAEAMKFTCHDKLCIPVPLYHCFGMVLGSLVCLAKGA 279
Query: 133 CHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
VF + F+ + L+ VEQ T+L VP + +A L + T S++ + G
Sbjct: 280 AAVFPGESFDPLTTLQVVEQERCTALHGVPTMF--IAELEHPEFTRFDLSSLRTGVMAGA 337
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P E+M+ N +++ YG TE S L +T D +E
Sbjct: 338 TCPEEVMRRVQNLMYMKEVLIGYGQTE-CSPLNHITEIDSPVEK---------------- 380
Query: 252 HQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 306
+ + VG+ PH E+K+ + + G + +RG +M YW+ +
Sbjct: 381 ---RVLTVGRALPHTEVKIVDEFGEVLPINQAGEVCSRGYCIMQCYWNDPEKTAATIDSA 437
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
WL +GDIG +D+ G V +VGR I GGEN+YP E+E L H + V G+ +
Sbjct: 438 GWLHSGDIGQMDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVQSD 497
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E V A +++R +E + +R EK FK PR ++ +
Sbjct: 498 KYGEEVCAWIKVRSGATITEED----------------IRHFLTEK-FAYFKVPR-YIKF 539
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHL 451
P+T TGKI++ ++R + L
Sbjct: 540 VDQNPMTVTGKIQKFKMRELMYQEL 564
>gi|123914455|sp|Q0P4F7.1|ACSF2_DANRE RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|112418669|gb|AAI22099.1| Acyl-CoA synthetase family member 2 [Danio rerio]
Length = 606
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 175/392 (44%), Gaps = 50/392 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYG--EDDVYLHTAPLCH-IGGLSSAMA 126
I FTSGTTG PKG +SH ++ + +GY ++ PL H G + +
Sbjct: 253 IQFTSGTTGKPKGATLSHHNIVNNAYFTGMRIGYNWRKNVRICLPVPLYHCFGSVGGGVI 312
Query: 127 MLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
M + G +F ++ ++ L A+E+ T + P + D+ + K SV+
Sbjct: 313 MALYGTTVIFPSTGYDGRANLRAIEKEKCTFVYGTPTMYIDMLGQPDLAKF--DLSSVRG 370
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+M++ N +++ YG TE S P F
Sbjct: 371 GIAAGSPCPPEVMRKILNVMGIKEMVIGYGTTENS-------------------PVTFCG 411
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAK 299
+S + + V VG +PH E KV + + G ++ RG VML YW
Sbjct: 412 FPVDSAER-KIVTVGCISPHTEAKVVDPTTGEIVPLGAQGELMIRGYCVMLEYWQDEEKT 470
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
T + W TGDI S+D + GR I GGEN+YP E+E L HP I+
Sbjct: 471 RECITKDRWYKTGDIASLDQFAYCKIEGRIKDLIIRGGENIYPAEIEQFLHTHPKILEAQ 530
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VVG+ + R+ E V AC+RL+E + + E ++ +C+ K + +K
Sbjct: 531 VVGVKDERMGEEVCACIRLKEGQE----------------CTVEEIKAYCKGK-IAHYKV 573
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
PR ++L+ + +PLT TGKI++ ++R L
Sbjct: 574 PR-YILFVQDYPLTITGKIQKHKLRERTEKQL 604
>gi|429756335|ref|ZP_19288932.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429171453|gb|EKY13073.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 542
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 190/434 (43%), Gaps = 59/434 (13%)
Query: 22 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 81
+LR V G S F+ + +T + L L F + V I +TSGTTG+PK
Sbjct: 146 TLRKEVYWGESWQHFLAHGEKVTDEKL-------LSFEEKVQFDDPVNIQYTSGTTGNPK 198
Query: 82 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK-- 139
GV +SH ++ + Y E D P H G+ V + IP
Sbjct: 199 GVTLSHHNILNNGYFIGIRMNYTEKDRVCIPVPFYHCFGMVIGNLACTVHGATMVIPNDS 258
Query: 140 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 199
F++ LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 259 FDATKTLEAVEKEKCTSLYGVPTMF--ISELYVLDKQPYDLSSLRTGVMAGALCPPEIMK 316
Query: 200 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 259
++ YGMTETS T + P + Q V
Sbjct: 317 RVKEQMNMHEITICYGMTETSPVSTQTKIGAP--------------------FEKQIYSV 356
Query: 260 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 313
G H+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD
Sbjct: 357 GTIHDHLEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATQQVIDEQRWMHSGD 416
Query: 314 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 373
+ +D+ G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+
Sbjct: 417 LAMMDEDGYIHISGRIKDLIIRGGENISPKEIEDFLYTYKGVMDAQVIGVPSKKYGEEVM 476
Query: 374 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFP 431
A ++ +E + L+ E L C+ + + +K PR W+ + FP
Sbjct: 477 AWIKPKEG----------------VTLTEEELHDFCKGR-IAHYKVPR---YWKFVEEFP 516
Query: 432 LTSTGKIRRDEVRR 445
+T +GKIR+ E+R
Sbjct: 517 MTISGKIRKVEMRE 530
>gi|403718190|ref|ZP_10943189.1| putative fatty-acid--CoA ligase [Kineosphaera limosa NBRC 100340]
gi|403208635|dbj|GAB97872.1| putative fatty-acid--CoA ligase [Kineosphaera limosa NBRC 100340]
Length = 552
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 174/385 (45%), Gaps = 47/385 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + GY +D P H G+ +A
Sbjct: 191 IQYTSGTTGFPKGATLSHRNILNNGYFVGELCGYTHEDRICIPVPFYHCFGMVMGNLAAT 250
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GAC + P FE + + AV+ TSL VP + +A L S++ +
Sbjct: 251 SHGACMIIPAPSFEPAATMRAVQDERATSLYGVPTMF--IAELALPDFADYDVSSLRTGI 308
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK+ + ++ YGMTETS ++ MT D L +
Sbjct: 309 MAGSPCPVEVMKQVVSQMHMREVAICYGMTETSP-VSTMTRRDDDLRRRTE--------- 358
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPS 301
VG+ PH+E+K+ + G + TRG VML YW+
Sbjct: 359 ----------TVGRVMPHLEVKIVDPVTEQETPRGVSGELCTRGYSVMLGYWESPEKTAE 408
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ W+ TGD+ ++DD G +VGR + GGEN+YP E+E L HPGI + VV
Sbjct: 409 AIDADGWMHTGDLATMDDDGYCAIVGRIKDMVIRGGENIYPREIEEFLYSHPGISDVQVV 468
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E ++A W ++ + L ++ +R+ C K L +K PR
Sbjct: 469 GVPDVKYGEELMA-------WIIAKPGSEG--------LDADDIREFCSGK-LAHYKIPR 512
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRRE 446
+V FP+T TGKIR+ ++R E
Sbjct: 513 -YVHVVDSFPMTVTGKIRKVQMRAE 536
>gi|262369650|ref|ZP_06062978.1| long-chain fatty-acid-CoA ligase [Acinetobacter johnsonii SH046]
gi|262315718|gb|EEY96757.1| long-chain fatty-acid-CoA ligase [Acinetobacter johnsonii SH046]
Length = 562
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 206/445 (46%), Gaps = 49/445 (11%)
Query: 15 LQHTAIPSLRWHVSLGSSSSDFVNK-RDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
L+ +P L++ + + +++ D+LT + + L + S E + I FT
Sbjct: 153 LKAERLPHLKYIIKIDEEEHTGLHRFSDLLTPPSKRQLNQLELVASESQFDE-TINIQFT 211
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGA 132
SGTTG+PKG +++H+ ++ + D + PL H G+ +A + G+
Sbjct: 212 SGTTGNPKGTMLTHNNILNNGYFVGEAIHLSPADRVCISVPLFHCFGMVMGNLACITHGS 271
Query: 133 CHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
V+ F L+A++Q T+ VP + +A L + S++ + G
Sbjct: 272 TMVYPSAVFNPLETLKAIQQEKCTAAYGVPTMF--IAILEHEQFDDFDLSSLRTGIMAGS 329
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P E+M+ + +++ YGMTET+ P + + T +SV
Sbjct: 330 PCPREIMQRVIDRMHMSEITICYGMTETA-------------------PVSAQSSTSDSV 370
Query: 252 HQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGE 306
Q G VG+ PH+E+K+ + +G + RG VML YW+ V
Sbjct: 371 EQRVGT-VGRVHPHLEIKIVDEQGKVVPRGQLGELCVRGYSVMLGYWEDHEKSQEVIDSA 429
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
W+ TGDI +D+ G V + GR + GGEN++P+E+E L HP + + V+G+ +A
Sbjct: 430 RWMHTGDIAEMDEAGFVKIKGRIKDVVIRGGENLFPKEIEDFLYTHPDVSDVQVIGLPDA 489
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
R E + AC+ L E + +E E +RQ+C E +++ K PR +V +
Sbjct: 490 RYGEELCACIILHEHHEITE----------------ESIRQYCAE-HISHNKVPR-YVRF 531
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHL 451
FP+T++GK ++ +++ + + L
Sbjct: 532 FNEFPMTASGKAQKFKLQEFMRNEL 556
>gi|404443308|ref|ZP_11008479.1| AMP-dependent synthetase and ligase [Mycobacterium vaccae ATCC
25954]
gi|403655602|gb|EJZ10449.1| AMP-dependent synthetase and ligase [Mycobacterium vaccae ATCC
25954]
Length = 515
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 183/388 (47%), Gaps = 58/388 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAML 128
I +T GTTG+PKGV++SH+ L+ +L +A + LH+AP+ H+ S +A
Sbjct: 163 IYYTGGTTGTPKGVMLSHANLMAAALGALATGQFLAPRGRLLHSAPMFHLADGSGWLARN 222
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR---DSVKK 185
+VG HV +P F +S EA+E H +T + P ++ + V R S+K
Sbjct: 223 VVGGSHVILPGFTPESVAEAIEHHQITDMFLAPTMIQ-----MFVDSPAAARHDLSSLKH 277
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL---YDPTLETPGQLPQA 242
++ G + +++ A P+AKL+ AYGMTE + + T +T DP L
Sbjct: 278 LIYGASPISQAVLERAMRLLPQAKLLQAYGMTELAPTTTVLTAEEHLDPALLR------- 330
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFL 297
G+ P E+K+ + + V G + RG HVML YW++
Sbjct: 331 ---------------SAGRAVPIAEVKIVDEDGNEVPRGTVGEVAARGPHVMLGYWNRPE 375
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
G W+ TGD G +DD G +++V R I +GGENVY EVE L QHP +
Sbjct: 376 ETAQALRGG-WMHTGDGGYLDDNGYLFIVDRIKDMIVTGGENVYSAEVENALAQHPSVAT 434
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
V+G+ +A E V A V L + ++E LR+HC + +
Sbjct: 435 CAVIGVPDADWGERVHAVVVLHDG----------------ATTTAEELREHCGSL-IARY 477
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
KAPR V + PLT+ K+ + ++R+
Sbjct: 478 KAPRT-VDFVDALPLTAAAKVSKVDLRK 504
>gi|424046952|ref|ZP_17784513.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-03]
gi|408884589|gb|EKM23325.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-03]
Length = 521
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 189/383 (49%), Gaps = 50/383 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG +SH+ ++ +++ ++ D + T PL H G + M A
Sbjct: 168 VILYTSGTTGQPKGAELSHTNMLTNAMSSQYLMRLEYSDTTMATLPLFHSFGQTVMMNAS 227
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
++ G+ V IP+FE K +E + QH V+ VP + +A L +++ + + VK L
Sbjct: 228 VLTGSTMVLIPRFEPKFVIEQIIQHKVSVFAGVPTMY--IALLRAGEQSPEHSELVKHSL 285
Query: 188 ----NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+GG LP E++++ + F + ++ YG++ET+ TF +
Sbjct: 286 RLGVSGGASLPVEVIRQFEHRF-ELPVLEGYGLSETAPVATFNHID-------------- 330
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 303
G+ P SV QP V K A ++K + +G + + VM Y +P +
Sbjct: 331 GDRLPGSVGQPLCGYVIKIA---DVKGHARPIGELGEVCIKSPSVMKGYH----GRPEAT 383
Query: 304 TGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+ W TGDIG +D+ GN+++V R I GG NVYP E+E VL+ P + + V
Sbjct: 384 RDALRDGWFLTGDIGRVDEHGNLFIVDRVKDMIIRGGYNVYPREIEEVLMCQPDVEMVAV 443
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VG + RL E V A V L + +++C S + L CRE+ L +K P
Sbjct: 444 VGEHDDRLGEEVHAHVVLHQ-----DAHC-----------SPDTLIAWCREQ-LADYKYP 486
Query: 421 RLFVLWRKPFPLTSTGKIRRDEV 443
R V RK P+T+TGKI + E+
Sbjct: 487 RR-VFIRKALPMTATGKILKREL 508
>gi|325673738|ref|ZP_08153429.1| acyl-CoA synthetase [Rhodococcus equi ATCC 33707]
gi|325555759|gb|EGD25430.1| acyl-CoA synthetase [Rhodococcus equi ATCC 33707]
Length = 500
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 183/390 (46%), Gaps = 40/390 (10%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
PE ++ TSGTTG PK ++ H L+ L + G G D+ L + P HI G++
Sbjct: 142 PEAPAVLLHTSGTTGPPKIAILRHRHLVSYVLGGTELFGAGPDEAALVSVPPYHIAGVAG 201
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
+ L G V +P F+ + + V + +T + VP ++A + ++ + G S+
Sbjct: 202 LLTGLYSGRRIVQMPNFDEREWVRLVREQEITHAMVVPTMLARIVDVL--TEDGGGLPSL 259
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + GGG +P +++ A P ++ YG+TETSSS+ + P + A
Sbjct: 260 RHLSYGGGRMPLPVIERALGLLPDVDFVNGYGLTETSSSVAVLG--------PAEHRAAV 311
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 298
+ P+ V + G VG P P VE+ V D V G + RGA V Y +
Sbjct: 312 SSSDPD-VQRRLG-SVGLPVPDVEIVVRDDAGRDVAPGERGELWVRGAQVSGEY-----S 364
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
S+ + W T D G IDDGG V++ GR + I GGEN+ P E+E V+ +HP + +
Sbjct: 365 GASLLDSDGWFRTRDGGWIDDGGYVYVEGRLDDVIVRGGENLSPGEIEDVIGEHPSVEDV 424
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VV G+ + + E+VVA V R E +L+++ +R + L +
Sbjct: 425 VVYGVPDDQWGEIVVAAVVPR----------------PEGVLTADEIRAWVGAR-LRSSR 467
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVM 448
P FV +R P GK+ R +R E +
Sbjct: 468 VP-AFVEFRTDVPRNDLGKVLRRVLRDEFV 496
>gi|441213528|ref|ZP_20975774.1| putative acid--CoA ligase [Mycobacterium smegmatis MKD8]
gi|440625492|gb|ELQ87338.1| putative acid--CoA ligase [Mycobacterium smegmatis MKD8]
Length = 496
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 194/421 (46%), Gaps = 43/421 (10%)
Query: 39 KRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKI 98
R +LT++ + P P+ ++ FTSGTT PK V ++H+ L +
Sbjct: 113 DRPVLTSEEFLSQARTVDPAAEFADPDAVAVVLFTSGTTSRPKAVELTHNNLTSYITGTV 172
Query: 99 AIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLI 158
+D L P HI G+S+AM+ L G V++ F++ +E V VTS
Sbjct: 173 EFGSAAPEDAALICVPPYHIAGVSAAMSNLYAGRKMVYLRNFDAHRWVELVRTEGVTSAT 232
Query: 159 TVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTE 218
VP ++ + T + + T +++ + GG + L+++A P ++AYG+TE
Sbjct: 233 VVPTMLDRIVTAL--ETTRAELPTLRNLAYGGSKVALPLVRKALELMPNVGFVNAYGLTE 290
Query: 219 TSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD----- 273
TSS++ + P A + P + VG+ P +E+++ +
Sbjct: 291 TSSTIAVL--------GPDDHRAALASDDPGVTRRLG--SVGQVVPGIEVQIRGEDGTVL 340
Query: 274 GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRI 333
G G + RG V RY + SV + W T D+ +D G +++ GR + I
Sbjct: 341 GPGETGELFVRGEQVSGRYTEIG----SVLDEDGWFPTKDVAMLDQDGYLFIGGRSDDTI 396
Query: 334 KSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSS 393
GGEN+ P E+E VL++HP + + VVG + + +++VA V +E + D
Sbjct: 397 IRGGENIAPAEIEDVLVEHPDVRDVAVVGPEDPQWGQIIVAVV---VPADGAEPDAD--- 450
Query: 394 KNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
VLR+H R K+L G + P V++R P +TGK+ +RR+++ L+
Sbjct: 451 ----------VLREHVR-KHLRGSRTPDR-VVFRAELPTNATGKV----LRRQLVDELQP 494
Query: 454 L 454
+
Sbjct: 495 I 495
>gi|254822656|ref|ZP_05227657.1| hypothetical protein MintA_22194 [Mycobacterium intracellulare ATCC
13950]
gi|379756882|ref|YP_005345554.1| hypothetical protein OCO_48710 [Mycobacterium intracellulare
MOTT-02]
gi|379764406|ref|YP_005350803.1| hypothetical protein OCQ_49710 [Mycobacterium intracellulare
MOTT-64]
gi|387878249|ref|YP_006308553.1| hypothetical protein W7S_24385 [Mycobacterium sp. MOTT36Y]
gi|406033149|ref|YP_006732041.1| 2-succinylbenzoate--CoA ligase [Mycobacterium indicus pranii MTCC
9506]
gi|443308031|ref|ZP_21037818.1| hypothetical protein W7U_20330 [Mycobacterium sp. H4Y]
gi|378807098|gb|AFC51233.1| hypothetical protein OCO_48710 [Mycobacterium intracellulare
MOTT-02]
gi|378812348|gb|AFC56482.1| hypothetical protein OCQ_49710 [Mycobacterium intracellulare
MOTT-64]
gi|386791707|gb|AFJ37826.1| hypothetical protein W7S_24385 [Mycobacterium sp. MOTT36Y]
gi|405131694|gb|AFS16949.1| 2-succinylbenzoate--CoA ligase [Mycobacterium indicus pranii MTCC
9506]
gi|442765399|gb|ELR83397.1| hypothetical protein W7U_20330 [Mycobacterium sp. H4Y]
Length = 505
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 182/403 (45%), Gaps = 45/403 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ I+ FTSGTT PK V +SH+ L + + D L P HI G+S+
Sbjct: 138 PDAVAIVLFTSGTTSQPKAVELSHNNLTSYVTGTVEFGAAADTDAALICVPPYHIAGVSA 197
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG---- 179
A++ L G V++P F+++ + + VT+ VP ++ + T++ + G
Sbjct: 198 ALSNLYAGRKMVYLPNFDAQEWVRLINTENVTTATVVPTMLDRIVTVL---ENGDGPAIE 254
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
S++ + GG + L++ A P ++AYG+TETSS++ +T P
Sbjct: 255 LPSLRNLAYGGSKVGLPLVRRALELLPDVGFVNAYGLTETSSTIAVLT--------PDDH 306
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWD 294
A TP + VG+ +EL++ + + G + RG V RY
Sbjct: 307 RAALAASTPEGARRLG--SVGQAVAGIELQIRDEAGNVLPPGETGELFVRGEQVSGRYT- 363
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
SV W T DI +DD G +++ GR + I GGEN+ P E+E VL++HP
Sbjct: 364 ---GIGSVLDENGWFPTKDIAMLDDEGYLFIGGRSDDTIIRGGENIAPAELEEVLVEHPH 420
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ + VVG+ E QW ++ + LR+ R K+L
Sbjct: 421 VRDVAVVGV----------------EDPQWGQAIVAVVVPAPGVDPDPAELREFVR-KSL 463
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 457
G + P V++R P T+TGK+ R E+ + ++ L+S P+
Sbjct: 464 RGSRTPD-EVVFRDELPTTATGKVLRREI-IQTLTELRSAPAQ 504
>gi|440778325|ref|ZP_20957089.1| FadD13 [Mycobacterium avium subsp. paratuberculosis S5]
gi|436721301|gb|ELP45444.1| FadD13 [Mycobacterium avium subsp. paratuberculosis S5]
Length = 507
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 181/387 (46%), Gaps = 54/387 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIV----GYGEDDVYLHTAPLCHIGGLSSAM 125
+ +TSGTTG PKGV +H A + + I + GED L + PL H+ G +S +
Sbjct: 159 LFYTSGTTGYPKGVPTTHEAFLTNTENAIRCLQQPRDLGEDMRTLISVPLFHVTGCNSQL 218
Query: 126 -AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 182
A +G V +P + + L AV V+ ++TVPAI A L+ K + G D
Sbjct: 219 LAAARLGGASVILPALDLDALLNAVVAERVSVMVTVPAIYA----LLLRHKDFAGTDVSR 274
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
V+ + GG + L++ ++FP A + + YGMTET+S +T
Sbjct: 275 VRWVGYGGAPIAPSLVRTVKDAFPHATVFNGYGMTETASLMT------------------ 316
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVC--SDGSSHVGRILTRGAHVMLRYWDQFLAKP 300
V P+ VG P V+L + D VG ++TRGA+V YW++ A
Sbjct: 317 ---VLPDREAVEHADSVGYAVPSVDLGLIPFGDNEPGVGELVTRGANVTAGYWNRPQATA 373
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
S G WL TGD+ +DD G V ++ R I GGENV EVEAVLL PG+ V
Sbjct: 374 STFAGG-WLHTGDVVRVDDAGRVHIIDRLKDIINRGGENVSSVEVEAVLLGAPGVADACV 432
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ + + E V A + + + + D + + +HCR + L FK P
Sbjct: 433 LGVPDDVMGEKVGAVL-------FGDDDIDVPA-----------VLEHCRGR-LADFKVP 473
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREV 447
+ + P P + GK+ + +R +V
Sbjct: 474 QYVTVVDGPLPRNAGGKLLKARLRDQV 500
>gi|254298706|ref|ZP_04966157.1| AMP-binding domain protein [Burkholderia pseudomallei 406e]
gi|157808515|gb|EDO85685.1| AMP-binding domain protein [Burkholderia pseudomallei 406e]
Length = 570
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 199/440 (45%), Gaps = 49/440 (11%)
Query: 20 IPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
+PSLR V++ ++ + ++ D+L S R + + I FTSGTTG
Sbjct: 164 VPSLRTVVTMSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTG 223
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 137
SPKG ++H ++ + + ++ E D PL H G+ S +A + GA VF
Sbjct: 224 SPKGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFP 283
Query: 138 -PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 196
FE + L AV T+L VP + +A L +++ + G P E
Sbjct: 284 GAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIE 341
Query: 197 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 256
MK +++ AYGMTETS P +F + T +S+ + +
Sbjct: 342 TMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RT 381
Query: 257 VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 311
VG+ PH+E K+ + V G + TRG VML YWD A+ + + W+ T
Sbjct: 382 TTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRT 440
Query: 312 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 371
GD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++ E
Sbjct: 441 GDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEE 500
Query: 372 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 431
V A + LR ++ LR+ C + +K PR +V + P
Sbjct: 501 VCAWIVLRAGETMTDDE----------------LREFC-SGQIAHYKVPR-YVRFVDELP 542
Query: 432 LTSTGKIRRDEVRREVMSHL 451
+T TGK+++ +R ++ L
Sbjct: 543 MTVTGKVQKFVMRERMIDEL 562
>gi|406833430|ref|ZP_11093024.1| long-chain-fatty-acid--CoA ligase [Schlesneria paludicola DSM
18645]
Length = 555
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 191/446 (42%), Gaps = 54/446 (12%)
Query: 17 HTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPF---THSWAPEGAVIICFT 73
H P L+W +SL +++ V T + G S+ + H P + I +T
Sbjct: 142 HDEFPQLQWLISLTDKTTNGVLS---WTEFMQYGNSISNQQLHQREHGLDPHDPINIQYT 198
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 133
SGTT PKG +SH +++ + A G + D PL H G A C
Sbjct: 199 SGTTALPKGATLSHRNILLNAFYAGANQGLTDTDCLCVPVPLYHCFGCVLASLCAAAYGC 258
Query: 134 HVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
+ P F++ + L+A+E + T++ VP + +A L + S++ + G
Sbjct: 259 AMIYPSETFDAGAVLDAIETYQCTAVYGVPTMF--IALLEHPDYPQRRLTSLRTGIMAGS 316
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P LMK T ++ YG TE + LT +YDP G
Sbjct: 317 PCPITLMKRVTGEMGAKEMTVGYGETEAAPLLTQTGIYDPLEIRVGT------------- 363
Query: 252 HQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 305
VG+P P VE+K+ + G+ G + RG VM+ Y+ G
Sbjct: 364 -------VGRPLPGVEVKIVNPETGEDLGNEQPGEVCGRGHGVMIGYYRDPERTAEAIDG 416
Query: 306 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 365
+ WL TGD+G + G + GR I GGEN+YP E+E L +HP + + +VG+ +
Sbjct: 417 DGWLHTGDLGLREPNGCYRITGRLKDMIIRGGENIYPREIEEYLYRHPAVEEVQIVGVPD 476
Query: 366 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 425
+ E V+A ++LR ++++ ++ +CR L FK P V
Sbjct: 477 LKYGEAVLAWIKLRAGHT----------------VTAKEIQTYCR-SGLAHFKTPS-HVS 518
Query: 426 WRKPFPLTSTGKIRRDEVRREVMSHL 451
+ FP T TGKI++ ++R ++ L
Sbjct: 519 FVTSFPTTVTGKIQKFKIREIAINEL 544
>gi|389797499|ref|ZP_10200540.1| acyl-CoA synthetase [Rhodanobacter sp. 116-2]
gi|388447131|gb|EIM03144.1| acyl-CoA synthetase [Rhodanobacter sp. 116-2]
Length = 557
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 178/392 (45%), Gaps = 49/392 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMA 126
V I FTSGTTG+PKG ++H ++ + E D P H G+ +A
Sbjct: 205 VNIQFTSGTTGAPKGATLTHHNIVNNGWFIGEAMRLTEYDRLCIPVPFYHCFGMVLGNLA 264
Query: 127 MLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ GAC V IP F++ + LE V + T L VP + +A L + +++
Sbjct: 265 CVTHGACMV-IPGEGFDALATLETVAEEKCTGLHGVPTMF--IAELEHPRFAEFDLSTLR 321
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E+M+ A++ AYGMTETS ++F T+ D LE
Sbjct: 322 TGIMAGSPCPIEVMRRVVGEMHLAEITIAYGMTETSP-VSFQTVPDDPLER--------- 371
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 299
+ VG+ P +E+K+ + V G + TRG VML YW+
Sbjct: 372 ----------RVDSVGRIHPQLEVKLVDERGLIVPRGTPGELCTRGYSVMLGYWEDESRT 421
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
V W+ TGD+ ID G +VGR I GGENVYP EVE L HP ++ +
Sbjct: 422 REVIDAARWMHTGDLAVIDADGYCRIVGRLKDMIIRGGENVYPREVEEFLYAHPKVLDVQ 481
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V G+ + + E V A VRLRE SE+ ++ +CR +L +K
Sbjct: 482 VFGVPDTKFGEQVCAWVRLREGAGASEAE----------------IQDYCRH-HLAYYKV 524
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
P +V + FP+T TGK+++ +R ++ L
Sbjct: 525 PH-YVRFVDAFPMTVTGKVQKYRMREAMVDEL 555
>gi|41408972|ref|NP_961808.1| FadD13 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|417749516|ref|ZP_12397911.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
avium subsp. paratuberculosis S397]
gi|41397331|gb|AAS05191.1| FadD13 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336458971|gb|EGO37925.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
avium subsp. paratuberculosis S397]
Length = 510
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 181/387 (46%), Gaps = 54/387 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIV----GYGEDDVYLHTAPLCHIGGLSSAM 125
+ +TSGTTG PKGV +H A + + I + GED L + PL H+ G +S +
Sbjct: 162 LFYTSGTTGYPKGVPTTHEAFLTNTENAIRCLQQPRDLGEDMRTLISVPLFHVTGCNSQL 221
Query: 126 -AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 182
A +G V +P + + L AV V+ ++TVPAI A L+ K + G D
Sbjct: 222 LAAARLGGASVILPALDLDALLNAVVAERVSVMVTVPAIYA----LLLRHKDFAGTDVSR 277
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
V+ + GG + L++ ++FP A + + YGMTET+S +T
Sbjct: 278 VRWVGYGGAPIAPSLVRTVKDAFPHATVFNGYGMTETASLMT------------------ 319
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVC--SDGSSHVGRILTRGAHVMLRYWDQFLAKP 300
V P+ VG P V+L + D VG ++TRGA+V YW++ A
Sbjct: 320 ---VLPDREAVEHADSVGYAVPSVDLGLIPFGDNEPGVGELVTRGANVTAGYWNRPQATA 376
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
S G WL TGD+ +DD G V ++ R I GGENV EVEAVLL PG+ V
Sbjct: 377 STFAGG-WLHTGDVVRVDDAGRVHIIDRLKDIINRGGENVSSVEVEAVLLGAPGVADACV 435
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ + + E V A + + + + D + + +HCR + L FK P
Sbjct: 436 LGVPDDVMGEKVGAVL-------FGDDDIDVPA-----------VLEHCRGR-LADFKVP 476
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREV 447
+ + P P + GK+ + +R +V
Sbjct: 477 QYVTVVDGPLPRNAGGKLLKARLRDQV 503
>gi|331699394|ref|YP_004335633.1| long-chain-fatty-acid--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
gi|326954083|gb|AEA27780.1| Long-chain-fatty-acid--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
Length = 554
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 178/399 (44%), Gaps = 47/399 (11%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
+ +P+ + I +TSGTTG PKG +SH ++ + GY +D P H G
Sbjct: 184 ALSPDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGRLCGYTAEDRVCIPVPFYHCFG 243
Query: 121 LSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
+ + IP F+ ++ L AV Q TSL VP + +A L
Sbjct: 244 MVMGNLGCTTNGSTMVIPAQGFDPEATLRAVAQERCTSLYGVPTMF--IAELNHPDFASY 301
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
S++ + G P E+MK+ + ++ YGMTETS ++ T D ++E
Sbjct: 302 DLSSLRTGIMAGSPCPVEVMKQVVDRMGMTEVTICYGMTETSP-VSTQTRADDSVER--- 357
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRY 292
+ VG+ PHVE+KV + G + TRG VML Y
Sbjct: 358 ----------------RVSTVGRVHPHVEVKVVDPETGLTVPRGQAGELCTRGYSVMLGY 401
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
W+Q W+ TGD+ +D G + + GR + GGENVYP E+E L H
Sbjct: 402 WEQPDKTAESIDAARWMHTGDLAVMDSDGYLNITGRIKDMVIRGGENVYPREIEEFLYTH 461
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P ++ V+G+ + + E + A V+LR+ + L++E +R+ K
Sbjct: 462 PDVLDAQVIGVPDIKYGEELCAWVKLRDGVEG---------------LTAEQVREFATGK 506
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
L +K PR +V+ FP+T TGK+R+ E+R + + L
Sbjct: 507 -LAHYKIPR-YVIVVDEFPMTVTGKVRKVEMREKSVELL 543
>gi|386011894|ref|YP_005930171.1| Acyl-CoA synthetase [Pseudomonas putida BIRD-1]
gi|313498600|gb|ADR59966.1| Acyl-CoA synthetase [Pseudomonas putida BIRD-1]
Length = 557
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 173/382 (45%), Gaps = 47/382 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG +SHS ++ +G E D + PL H G+ A M
Sbjct: 206 IQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHDRLVVPVPLYHCFGMVMANLGCM 265
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ P F+ + L AV Q T+L VP + +A L ++ S++ +
Sbjct: 266 THGSALIYPSDAFDPLATLRAVAQEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T LE VT
Sbjct: 324 MAGATCPIEVMRRVIGEMHMAEVQIAYGMTETSP-VSLQTGAADDLER---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E KV ++G++ +G + TRG VML YW+ A
Sbjct: 374 ----------SVGRTQPRLESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAES 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
E W+ TGD+ +D+ G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDAEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ ++ E +VA VRL SE LR+ R + + FK PR
Sbjct: 484 VPCSKYGEEIVAWVRLHPGHAVSEVE----------------LREWARAR-IAHFKVPRY 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVR 444
F + FP+T TGK+++ +R
Sbjct: 527 F-RFVDAFPMTVTGKVQKFRMR 547
>gi|53721001|ref|YP_109987.1| AMP-binding domain-containing protein [Burkholderia pseudomallei
K96243]
gi|126453323|ref|YP_001068259.1| AMP-binding protein [Burkholderia pseudomallei 1106a]
gi|167847888|ref|ZP_02473396.1| acyl-CoA synthetase [Burkholderia pseudomallei B7210]
gi|167896446|ref|ZP_02483848.1| acyl-CoA synthetase [Burkholderia pseudomallei 7894]
gi|167904847|ref|ZP_02492052.1| acyl-CoA synthetase [Burkholderia pseudomallei NCTC 13177]
gi|167913125|ref|ZP_02500216.1| acyl-CoA synthetase [Burkholderia pseudomallei 112]
gi|242318046|ref|ZP_04817062.1| AMP-binding domain protein [Burkholderia pseudomallei 1106b]
gi|386863694|ref|YP_006276643.1| AMP-binding protein [Burkholderia pseudomallei 1026b]
gi|418394740|ref|ZP_12968837.1| AMP-binding domain protein [Burkholderia pseudomallei 354a]
gi|418537313|ref|ZP_13102953.1| AMP-binding domain protein [Burkholderia pseudomallei 1026a]
gi|418554847|ref|ZP_13119609.1| AMP-binding domain protein [Burkholderia pseudomallei 354e]
gi|52211415|emb|CAH37406.1| putative long-chain-fatty-acid--CoA ligase [Burkholderia
pseudomallei K96243]
gi|126226965|gb|ABN90505.1| AMP-binding domain protein [Burkholderia pseudomallei 1106a]
gi|242141285|gb|EES27687.1| AMP-binding domain protein [Burkholderia pseudomallei 1106b]
gi|385350022|gb|EIF56574.1| AMP-binding domain protein [Burkholderia pseudomallei 1026a]
gi|385369739|gb|EIF75049.1| AMP-binding domain protein [Burkholderia pseudomallei 354e]
gi|385374682|gb|EIF79520.1| AMP-binding domain protein [Burkholderia pseudomallei 354a]
gi|385660822|gb|AFI68245.1| AMP-binding domain protein [Burkholderia pseudomallei 1026b]
Length = 576
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 200/440 (45%), Gaps = 49/440 (11%)
Query: 20 IPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
+PSLR V++ ++ + ++ D+L S R + + I FTSGTTG
Sbjct: 170 VPSLRTVVTMSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTG 229
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 137
SPKG ++H ++ + + ++ E D PL H G+ S +A + GA VF
Sbjct: 230 SPKGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFP 289
Query: 138 -PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 196
FE + L AV T+L VP + +A L +++ + G P E
Sbjct: 290 GAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIE 347
Query: 197 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 256
MK +++ AYGMTETS P +F + T +S+ + +
Sbjct: 348 TMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RT 387
Query: 257 VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 311
VG+ PH+E K+ + V G + TRG VML YWD A+ + + W+ T
Sbjct: 388 TTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRT 446
Query: 312 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 371
GD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++ E
Sbjct: 447 GDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEE 506
Query: 372 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 431
V A + LR ++ + LR+ C + +K PR +V + P
Sbjct: 507 VCAWIVLRAGET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELP 548
Query: 432 LTSTGKIRRDEVRREVMSHL 451
+T TGK+++ +R ++ L
Sbjct: 549 MTVTGKVQKFVMRERMIDEL 568
>gi|421745631|ref|ZP_16183478.1| AMP-dependent synthetase and ligase [Cupriavidus necator HPC(L)]
gi|409775910|gb|EKN57352.1| AMP-dependent synthetase and ligase [Cupriavidus necator HPC(L)]
Length = 588
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 187/399 (46%), Gaps = 64/399 (16%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
+P+ ++ +TSGTTG PKG + +H L+ + + + G + V + APL H+ G+
Sbjct: 214 SPDDLCVLPYTSGTTGHPKGCMHTHRTLLASTFSAVLWRGLHAEAVAMGVAPLFHLLGMQ 273
Query: 123 SAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+AM M + +GA V +P++++ +A +E++ VT+ PA++ D RD
Sbjct: 274 NAMLMPIAIGATVVMLPRWDAATAARLIERYRVTTWGAPPAMLIDFFA----HPEASARD 329
Query: 182 -SVKKILNGGGGLPSELMKEATNSFPKAKL----ISAYGMTETSSSLTFMTLYDPTLETP 236
S +LNGGG M EA + K++ I YGMTET+S L
Sbjct: 330 LSSLTLLNGGGAA----MPEAVAAMLKSRFDLGYIEGYGMTETASFLHC----------- 374
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVML 290
N +H+P+ C+G PA V+ ++ + VG ++T G +ML
Sbjct: 375 ------------NPLHRPKRQCLGIPAFGVDSRIVDPATLAPLAPGEVGELVTSGEQLML 422
Query: 291 RYW-DQFLAKPSV--STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 347
YW D+ + S G+ + TGD+ S+DD G ++ R I G V+P EVE
Sbjct: 423 GYWNDEAANRESFFERDGKRFFRTGDLASVDDEGYFFMRDRLKRMINVSGYKVWPAEVET 482
Query: 348 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 407
+L QHP I +V + + R E V A V L K L +E++
Sbjct: 483 MLYQHPAIHEACIVAVPDRRQGESVKAVVVL---------------KPGATLEPAELI-A 526
Query: 408 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
CRE+ + +K PR V +R P + TGK+ E++ E
Sbjct: 527 WCRER-MAAYKTPRA-VEFRSALPKSGTGKVLWREIQAE 563
>gi|167740791|ref|ZP_02413565.1| acyl-CoA synthetase [Burkholderia pseudomallei 14]
gi|217423840|ref|ZP_03455340.1| AMP-binding domain protein [Burkholderia pseudomallei 576]
gi|217392903|gb|EEC32925.1| AMP-binding domain protein [Burkholderia pseudomallei 576]
Length = 576
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 199/440 (45%), Gaps = 49/440 (11%)
Query: 20 IPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
+PSLR V++ ++ + ++ D+L S R + + I FTSGTTG
Sbjct: 170 VPSLRTVVTMSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTG 229
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 137
SPKG ++H ++ + + ++ E D PL H G+ S +A + GA VF
Sbjct: 230 SPKGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFP 289
Query: 138 -PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 196
FE + L AV T+L VP + +A L +++ + G P E
Sbjct: 290 GAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIE 347
Query: 197 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 256
MK +++ AYGMTETS P +F + T +S+ + +
Sbjct: 348 TMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RT 387
Query: 257 VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 311
VG+ PH+E K+ + V G + TRG VML YWD A+ + + W+ T
Sbjct: 388 TTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRT 446
Query: 312 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 371
GD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++ E
Sbjct: 447 GDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEE 506
Query: 372 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 431
V A + LR ++ LR+ C + +K PR +V + P
Sbjct: 507 VCAWIVLRAGETMTDDE----------------LREFC-SGQIAHYKVPR-YVRFVDELP 548
Query: 432 LTSTGKIRRDEVRREVMSHL 451
+T TGK+++ +R ++ L
Sbjct: 549 MTVTGKVQKFVMRERMIDEL 568
>gi|167721819|ref|ZP_02405055.1| acyl-CoA synthetase [Burkholderia pseudomallei DM98]
Length = 576
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 200/440 (45%), Gaps = 49/440 (11%)
Query: 20 IPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
+PSLR V++ ++ + ++ D+L S R + + I FTSGTTG
Sbjct: 170 VPSLRTVVTMSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTG 229
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 137
SPKG ++H ++ + + ++ E D PL H G+ S +A + GA VF
Sbjct: 230 SPKGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFP 289
Query: 138 -PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 196
FE + L AV T+L VP + +A L +++ + G P E
Sbjct: 290 GAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIE 347
Query: 197 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 256
MK +++ AYGMTETS P +F + T +S+ + +
Sbjct: 348 TMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RT 387
Query: 257 VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 311
VG+ PH+E K+ + V G + TRG VML YWD A+ + + W+ T
Sbjct: 388 TTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRT 446
Query: 312 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 371
GD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++ E
Sbjct: 447 GDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEE 506
Query: 372 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 431
V A + LR ++ + LR+ C + +K PR +V + P
Sbjct: 507 VCAWIVLRAGET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELP 548
Query: 432 LTSTGKIRRDEVRREVMSHL 451
+T TGK+++ +R ++ L
Sbjct: 549 MTVTGKVQKFVMRERMIDEL 568
>gi|167826369|ref|ZP_02457840.1| acyl-CoA synthetase [Burkholderia pseudomallei 9]
gi|226193138|ref|ZP_03788748.1| AMP-binding domain protein [Burkholderia pseudomallei Pakistan 9]
gi|225934738|gb|EEH30715.1| AMP-binding domain protein [Burkholderia pseudomallei Pakistan 9]
Length = 576
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 199/440 (45%), Gaps = 49/440 (11%)
Query: 20 IPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
+PSLR V++ ++ + ++ D+L S R + + I FTSGTTG
Sbjct: 170 VPSLRTVVTMSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTG 229
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 137
SPKG ++H ++ + + ++ E D PL H G+ S +A + GA VF
Sbjct: 230 SPKGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFP 289
Query: 138 -PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 196
FE + L AV T+L VP + +A L +++ + G P E
Sbjct: 290 GAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIE 347
Query: 197 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 256
MK +++ AYGMTETS P +F + T +S+ + +
Sbjct: 348 TMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RT 387
Query: 257 VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 311
VG+ PH+E K+ + V G + TRG VML YWD A+ + + W+ T
Sbjct: 388 TTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRT 446
Query: 312 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 371
GD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++ E
Sbjct: 447 GDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEE 506
Query: 372 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 431
V A + LR ++ LR+ C + +K PR +V + P
Sbjct: 507 VCAWIVLRAGETMTDDE----------------LREFC-SGQIAHYKVPR-YVRFVDELP 548
Query: 432 LTSTGKIRRDEVRREVMSHL 451
+T TGK+++ +R ++ L
Sbjct: 549 MTVTGKVQKFVMRERMIDEL 568
>gi|254186486|ref|ZP_04893003.1| AMP-binding domain protein [Burkholderia pseudomallei Pasteur
52237]
gi|254194656|ref|ZP_04901087.1| AMP-binding domain protein [Burkholderia pseudomallei S13]
gi|403520675|ref|YP_006654809.1| AMP-binding protein [Burkholderia pseudomallei BPC006]
gi|157934171|gb|EDO89841.1| AMP-binding domain protein [Burkholderia pseudomallei Pasteur
52237]
gi|169651406|gb|EDS84099.1| AMP-binding domain protein [Burkholderia pseudomallei S13]
gi|403076317|gb|AFR17897.1| AMP-binding domain protein [Burkholderia pseudomallei BPC006]
Length = 570
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 200/440 (45%), Gaps = 49/440 (11%)
Query: 20 IPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
+PSLR V++ ++ + ++ D+L S R + + I FTSGTTG
Sbjct: 164 VPSLRTVVTMSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTG 223
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 137
SPKG ++H ++ + + ++ E D PL H G+ S +A + GA VF
Sbjct: 224 SPKGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFP 283
Query: 138 -PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 196
FE + L AV T+L VP + +A L +++ + G P E
Sbjct: 284 GAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIE 341
Query: 197 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 256
MK +++ AYGMTETS P +F + T +S+ + +
Sbjct: 342 TMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RT 381
Query: 257 VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 311
VG+ PH+E K+ + V G + TRG VML YWD A+ + + W+ T
Sbjct: 382 TTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRT 440
Query: 312 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 371
GD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++ E
Sbjct: 441 GDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEE 500
Query: 372 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 431
V A + LR ++ + LR+ C + +K PR +V + P
Sbjct: 501 VCAWIVLRAGET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELP 542
Query: 432 LTSTGKIRRDEVRREVMSHL 451
+T TGK+++ +R ++ L
Sbjct: 543 MTVTGKVQKFVMRERMIDEL 562
>gi|429746669|ref|ZP_19280005.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429165564|gb|EKY07608.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 542
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 190/434 (43%), Gaps = 59/434 (13%)
Query: 22 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 81
+LR V G S F+ + +T + L L F + V I +TSGTTG+PK
Sbjct: 146 TLRKEVYWGESWQHFLAHGEKVTDEKL-------LSFEEKVQFDDPVNIQYTSGTTGNPK 198
Query: 82 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK-- 139
GV +SH ++ + Y E D P H G+ V + IP
Sbjct: 199 GVTLSHHNILNNGYFIGIRMNYTEKDRVCIPVPFYHCFGMVIGNLACTVHGATMVIPNDS 258
Query: 140 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 199
F++ LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 259 FDATKTLEAVEKEKCTSLYGVPTMF--ISELYVLDKQPYDLSSLRTGVMAGALCPPEIMK 316
Query: 200 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 259
++ YGMTETS T + P + Q V
Sbjct: 317 RVKEQMNMHEITICYGMTETSPVSTQTKIGAP--------------------FEKQIYSV 356
Query: 260 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 313
G H+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD
Sbjct: 357 GTIHDHLEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATQQVIDEQRWMHSGD 416
Query: 314 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 373
+ +D+ G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+
Sbjct: 417 LAMMDEDGYIHISGRIKDLIIRGGENISPKEIEDFLYTYKGVMDAQVIGVPSKKYGEEVM 476
Query: 374 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFP 431
A ++ +E + L+ E L C+ + + +K PR W+ + FP
Sbjct: 477 AWIKPKEG----------------VTLTEEELHDFCKGR-IAHYKVPR---YWKFVEEFP 516
Query: 432 LTSTGKIRRDEVRR 445
+T +GKIR+ E+R
Sbjct: 517 MTISGKIRKVEMRE 530
>gi|172059174|ref|YP_001806826.1| AMP-binding domain-containing protein [Burkholderia ambifaria
MC40-6]
gi|171991691|gb|ACB62610.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MC40-6]
Length = 575
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 203/458 (44%), Gaps = 71/458 (15%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-------SDFVNK-RDMLTADILKGYSLRSLPFTHSWAPE 65
+L+ +PSLR VS+G + +D + + RD L L + A
Sbjct: 163 DLRAARVPSLRTVVSMGEVAPAGMFRFADVMARGRDTLDVAWLDAIG-------ATLAAT 215
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA- 124
+ I FTSGTTGSPKG ++H ++ + + + E D PL H G+ A
Sbjct: 216 DPINIQFTSGTTGSPKGATLTHCNVVNNARFIAMAMRFSEQDALCIPVPLYHCFGMVLAV 275
Query: 125 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
+A + GA VF + F+ + L AV T+L VP + +A L + ++
Sbjct: 276 LACVSKGAAMVFPGEAFDPVATLAAVADERCTALHGVPTMF--IAELDHPEFAKFDLSTL 333
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + G P E MK + +++ AYGMTETS P +F
Sbjct: 334 RTGIMAGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSF 374
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 298
+ T + + + + VG+ PH+E+K+ V G + T+G VML YWD
Sbjct: 375 QSSTDDPLEK-RTTTVGRIQPHLEVKIVDPEGRIVPVGATGELCTKGYSVMLGYWDD--- 430
Query: 299 KPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
T EV W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP
Sbjct: 431 --DAKTHEVLVDGWMHTGDLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPK 488
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
I V G+ +A+ E + A + LR Q SE + +R C +
Sbjct: 489 IQSAQVFGVPDAKYGEELCAWIVLRADEQMSEDD----------------VRAFC-NGQI 531
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+K PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 532 AHYKIPR-YIRFVDELPMTVTGKVQKFVMRERMIEELK 568
>gi|56697375|ref|YP_167743.1| AMP-binding protein [Ruegeria pomeroyi DSS-3]
gi|56679112|gb|AAV95778.1| AMP-binding enzyme [Ruegeria pomeroyi DSS-3]
Length = 571
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 181/395 (45%), Gaps = 48/395 (12%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-S 122
P+ + I FTSGTTG PKG ++H ++ + + E D PL H G+
Sbjct: 211 PDDPINIQFTSGTTGQPKGATLTHRNIVNNARFVTDRINLSERDRLAIPVPLYHCFGMVM 270
Query: 123 SAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+ + GA VF + F+ L+ VE T+L VP + +A L + T +
Sbjct: 271 GVLGAVSKGAAMVFPGEAFDPAQTLDTVEAERCTALYGVPTMF--VAMLQELATTSRDLS 328
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P ++MK+ + ++ YGMTETS ++F + D + E +
Sbjct: 329 SLRTGIMAGSPCPVDVMKQVNDRMHMGEVTICYGMTETSP-VSFQSFVDDSTEKRCE--- 384
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQF 296
VG+ PH+E+K+ D + V G + TRG VM YWD
Sbjct: 385 ----------------TVGRIHPHLEVKIVDDTGNTVPVGVQGELCTRGYSVMQGYWDD- 427
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
+ + + + W+ TGD+ +D G + GR I GGEN+YP E+E L HP I
Sbjct: 428 PERTAEAIRDGWMHTGDLAVLDADGFCTITGRVKDMIIRGGENIYPREIEEFLFGHPDIK 487
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ V GI +AR+ E V A W ++ C+ +S+E +R +CR + +
Sbjct: 488 EVQVFGIPDARMGEEVCA-------WVVAKPGCE---------ISAEDVRTYCRGQ-IAH 530
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
FK PR V P+T TGK ++ +R ++ L
Sbjct: 531 FKVPR-HVRIVTELPMTITGKPQKFIMRDRMVEML 564
>gi|407980554|ref|ZP_11161337.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. HYC-10]
gi|407412687|gb|EKF34460.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. HYC-10]
Length = 544
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 181/408 (44%), Gaps = 54/408 (13%)
Query: 60 HSW-------APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT 112
H W P+ + + +TSGTTG PKGV++SH+ ++ + + E D
Sbjct: 177 HEWENRMDELVPDDVMNMQYTSGTTGYPKGVMLSHTNIVCNASQIADCMKLTEQDRMCIP 236
Query: 113 APLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLI 171
P H G + +A L G + + F + L+ VE+ T L VP + +A L
Sbjct: 237 VPFFHCFGSVLGVLACLTKGGTIIPLESFHPERVLQTVEKEKCTVLHGVPTMF--IAELD 294
Query: 172 RVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 231
+++ + G PS +MK +L AYG TE+S +T T D
Sbjct: 295 HPNFHSYDLSTLRTGIMAGSLCPSHVMKAVIEKMGLRELTIAYGQTESSPVIT-QTRTDD 353
Query: 232 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRG 285
+ E Q VG+ P +E+K+ G+S G + TRG
Sbjct: 354 SFERRVQ-------------------TVGRALPQIEVKIVLPGTSEEVPRGEQGELCTRG 394
Query: 286 AHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 345
HVM Y+ A V + WL TGD+ +D G V + GR I GGENVYP+E+
Sbjct: 395 YHVMKGYYKNEEATNEVIDEDGWLHTGDLAEMDQDGYVKITGRLKDMIIRGGENVYPKEI 454
Query: 346 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 405
E VL HP I+ VVGI + E A +RL++ +S + L
Sbjct: 455 EDVLYTHPAILDAQVVGIPDETYGEEAAAFIRLKQGQ----------------TVSIDKL 498
Query: 406 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
+C+ + + +K P+ F + + +P+T++GKI++ ++++ + +K
Sbjct: 499 TSYCQSQ-MARYKIPKYFFITDE-YPMTASGKIQKFRLKKQALDLIKE 544
>gi|326331582|ref|ZP_08197872.1| substrate--CoA ligase [Nocardioidaceae bacterium Broad-1]
gi|325950838|gb|EGD42888.1| substrate--CoA ligase [Nocardioidaceae bacterium Broad-1]
Length = 542
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 176/396 (44%), Gaps = 47/396 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P + I +TSGTTG PKG +SH ++ + + E+D P H G+
Sbjct: 184 PNDPINIQYTSGTTGFPKGATLSHRNILNNGFFVTETIHFTEEDRLCIPVPFYHCFGMVM 243
Query: 124 A-MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
A + GA V P F+ ++ L+ V+ T+L VP + +A +
Sbjct: 244 ANLGSTTHGATMVIPGPGFDPRTTLQTVQDEKCTALYGVPTMF--IAMQDDPEFASFDLS 301
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
+++ + G P E+MK + +++ AYGMTETS ++ T D LE +
Sbjct: 302 TLRTGIMAGALCPIEVMKRCVSEMHMSEVAIAYGMTETSP-VSCQTRTDDDLERRTE--- 357
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 295
+G+ APHVE+K+ + V G TRG VML YWD
Sbjct: 358 ----------------TIGRAAPHVEIKIVDPATGAVVPRGTAGEFCTRGYSVMLGYWDD 401
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
+ W+ TGD+ + + G +VGR + GGEN+YP E+E L HP I
Sbjct: 402 DTKTAEAIDADGWMHTGDLAVMREDGYCVVVGRIKDMVIRGGENIYPREIEEFLFTHPDI 461
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
VVG+ + R E + A +R+R + L + +R K L
Sbjct: 462 AEAQVVGVPDERYGEELCAWIRMRPGAE---------------PLDAAAVRAFADGK-LA 505
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+K+PR +VL FP+T TGK+R+ ++R + ++ L
Sbjct: 506 HYKSPR-YVLIVDEFPMTVTGKVRKIDMREQSVALL 540
>gi|254184020|ref|ZP_04890611.1| AMP-binding domain protein [Burkholderia pseudomallei 1655]
gi|184214552|gb|EDU11595.1| AMP-binding domain protein [Burkholderia pseudomallei 1655]
Length = 570
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 200/440 (45%), Gaps = 49/440 (11%)
Query: 20 IPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
+PSLR V++ ++ + ++ D+L S R + + I FTSGTTG
Sbjct: 164 VPSLRTVVTMSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTG 223
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 137
SPKG ++H ++ + + ++ E D PL H G+ S +A + GA VF
Sbjct: 224 SPKGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFP 283
Query: 138 -PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 196
FE + L AV T+L VP + +A L +++ + G P E
Sbjct: 284 GAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIE 341
Query: 197 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 256
MK +++ AYGMTETS P +F + T +S+ + +
Sbjct: 342 TMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RT 381
Query: 257 VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 311
VG+ PH+E K+ + V G + TRG VML YWD A+ + + W+ T
Sbjct: 382 TTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRT 440
Query: 312 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 371
GD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++ E
Sbjct: 441 GDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEE 500
Query: 372 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 431
V A + LR ++ + LR+ C + +K PR +V + P
Sbjct: 501 VCAWIVLRAGET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELP 542
Query: 432 LTSTGKIRRDEVRREVMSHL 451
+T TGK+++ +R ++ L
Sbjct: 543 MTVTGKVQKFVMRERMIDEL 562
>gi|383826927|ref|ZP_09982042.1| long-chain-fatty-acid--CoA ligase [Mycobacterium xenopi RIVM700367]
gi|383331505|gb|EID10001.1| long-chain-fatty-acid--CoA ligase [Mycobacterium xenopi RIVM700367]
Length = 475
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 184/419 (43%), Gaps = 51/419 (12%)
Query: 27 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 86
V G DF + D+ + P + + + +TSGTTG PKGV+++
Sbjct: 107 VEKGFLGRDFAVPAGVPAIDLKSDFLASGSPLEREVSGDDIADVIYTSGTTGRPKGVMMN 166
Query: 87 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPKFESKSA 145
H+ + + E D YL P H G + +A L+ GA + + FE
Sbjct: 167 HAQTLRNYADWCELADLREGDRYLIVNPFFHTFGYKAGCIASLIRGATMIPVAVFEVDRV 226
Query: 146 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 205
LE VE+ VT L P + L R K+ S++ + G +P EL++ +
Sbjct: 227 LELVERERVTMLPGPPTLYHSLLA-ARGKRDLS---SLRAAVTGAADIPVELVRRIRSDL 282
Query: 206 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 265
P +++ YG+TE + T + +F ++ + G+P
Sbjct: 283 PFQSIMTGYGLTEAGTV------------TASRRGDSFEDIATTA---------GRPCDG 321
Query: 266 VELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWL 325
+E+++ DG +L RG VM Y D +A E WL TGD+G++D G + +
Sbjct: 322 LEVRIADDGE-----VLVRGYSVMQGYLDDPVATAEAIDDEGWLHTGDLGNLDAHGRLRI 376
Query: 326 VGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWS 385
VGR+ GG N YP E+E LL+HP + V+G+ + RL ++ A +
Sbjct: 377 VGRKKDMFIVGGFNAYPAEIEGFLLEHPAVAQAAVIGVPDERLGQVGKAFI--------- 427
Query: 386 ESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+ + ++ L CRE+ + GFK PR V + + P+ +TGK+ +D++R
Sbjct: 428 ---------VRNAAVEADDLLSWCRER-MAGFKVPRA-VQFVEALPVNATGKVMKDDLR 475
>gi|170694322|ref|ZP_02885476.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
gi|170140745|gb|EDT08919.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
Length = 576
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 188/394 (47%), Gaps = 50/394 (12%)
Query: 67 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-M 125
A+ I FTSGTTG+PKG ++HS ++ + + E D PL H G+ A +
Sbjct: 218 AINIQFTSGTTGNPKGATLTHSNVVNNARYIAMAMNLSEQDALCIPVPLYHCFGMVLAVL 277
Query: 126 AMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
A + VGA VF + F+ + L AV + T+L VP + +A L ++
Sbjct: 278 ACVSVGANMVFPGEAFDPAATLAAVTEEQCTALHGVPTMF--IAELDHPDFASYDLSRLR 335
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E MK+ + +++ AYGMTETS P +F
Sbjct: 336 TGIMAGSPCPIETMKKVVSRMHLSEITIAYGMTETS-------------------PVSFQ 376
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLA 298
+ T + + + + VG+ PH+E+K+ + V G + TRG VM YW D+
Sbjct: 377 SSTTDPLDK-RTTTVGRIQPHLEVKIIDPLGNIVPVGETGELCTRGYSVMQGYWGDEEKT 435
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ S+ G W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I +
Sbjct: 436 RESIVDG--WMHTGDLATLDAEGYCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 493
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V G+ +A+ E V A V LR Q ++E ++Q C + + +K
Sbjct: 494 QVFGVPDAKYGEEVCAWVVLRSGEQ----------------ATAEEIQQFCHGQ-IAHYK 536
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
P+ ++ + P+T TGK+++ +R+ ++ LK
Sbjct: 537 VPK-YIRFVDELPMTVTGKVQKFVMRQRMIDELK 569
>gi|398310927|ref|ZP_10514401.1| AMP-binding domain protein [Bacillus mojavensis RO-H-1]
Length = 548
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 175/393 (44%), Gaps = 48/393 (12%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMV 130
+TSGTTG PKGV+++H +I ++ + D P H G + +A + V
Sbjct: 197 YTSGTTGFPKGVMLTHFNVINNAVNIAECMKLTSSDRMCIPVPFFHCFGCVLGVLACVSV 256
Query: 131 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
GA V + +FE + L+ VE T+L VP + +A L S++ + G
Sbjct: 257 GAAMVPVVEFEPATVLKTVENEKCTALHGVPTMF--IAELHHQNFDSYDLSSLRTGIMAG 314
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
PSE+MK + AYG TE S +T N
Sbjct: 315 SSCPSEVMKAVIEKMGMTDITIAYGQTEASPVIT--------------------QTRAND 354
Query: 251 VHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVST 304
Q + G+ P VE+K+ G+ G + TRG HVM Y+ A
Sbjct: 355 SFQRRVETTGRALPEVEVKIVEPGTFQEVQRGVQGELCTRGYHVMKGYYKDKDATQKAIN 414
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
+ WL TGD+ +D+ G + GR + GGEN+YP E+E L +HP I+ + VVG+
Sbjct: 415 PDGWLFTGDLAVMDEDGYCRVTGRLKDMLIRGGENIYPREIEEFLYRHPNILDVQVVGVP 474
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ + E A ++L+E S E L+ +C+ K + K PR F+
Sbjct: 475 DEKYGEEAAAWIKLKEGKT----------------ASPEELKAYCKGK-IARHKIPRYFI 517
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 457
+ +P+T++GKI++ ++R + + L LPS+
Sbjct: 518 -FTDEYPMTASGKIQKYKLREKTI-QLFHLPSS 548
>gi|332285893|ref|YP_004417804.1| acyl-CoA synthetase [Pusillimonas sp. T7-7]
gi|330429846|gb|AEC21180.1| acyl-CoA synthetase [Pusillimonas sp. T7-7]
Length = 500
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 182/397 (45%), Gaps = 54/397 (13%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
AP + +TSGTTG PKGV+ S+ ++L I+ + D L PL H+G
Sbjct: 146 APADMFRLMYTSGTTGLPKGVMHSYENFYWKTLDHISELQLTAVDRLLVVGPLYHVGAFD 205
Query: 123 -SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
A+ VG + F++ AL+A+EQ +T P ++ L L K
Sbjct: 206 LPGFALFEVGGSLTILRDFDAGEALQAIEQGKLTGAWLAPIMLNRLLALPESKDY--DLS 263
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S+K ++ GG P++ ++ + FP + + AYG+TET S T M G+ +
Sbjct: 264 SLKWVVGGGERTPAQRIEAFGSLFPNGRYVDAYGLTETCSGDTMMQ--------AGREIE 315
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG------SSHVGRILTRGAHVMLRYW-- 293
G+ G+ HV +++ DG + H+G I G V YW
Sbjct: 316 KIGSA-------------GRALSHVRIQI-RDGEGRLQSAGHIGEICLWGPKVTRGYWKD 361
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
DQ + S + W +GD+G +D+ G ++LV R+ + SGGEN+ EVE VL Q P
Sbjct: 362 DQ---RTEESFFDDWFRSGDMGYLDEDGFLFLVDRKKDMVISGGENIASSEVERVLYQLP 418
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
I V+G+ +A+ E VVA LRE L+ + L+ HCR K
Sbjct: 419 DIEEAAVIGLPDAKWGERVVAVAVLREG----------------ATLTLDALQAHCRGK- 461
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
+ GFK PR V+ + P +GK+ + +R E+ +
Sbjct: 462 IGGFKIPRQLVVL-EALPRNPSGKVLKRVLRDELAAQ 497
>gi|67643093|ref|ZP_00441842.1| AMP-binding enzyme domain protein [Burkholderia mallei GB8 horse 4]
gi|124383885|ref|YP_001027564.1| AMP-binding protein [Burkholderia mallei NCTC 10229]
gi|254175161|ref|ZP_04881822.1| AMP-binding enzyme domain protein [Burkholderia mallei ATCC 10399]
gi|254201539|ref|ZP_04907903.1| AMP-binding domain protein [Burkholderia mallei FMH]
gi|254206875|ref|ZP_04913226.1| AMP-binding domain protein [Burkholderia mallei JHU]
gi|254357430|ref|ZP_04973704.1| AMP-binding domain protein [Burkholderia mallei 2002721280]
gi|124291905|gb|ABN01174.1| AMP-binding enzyme domain protein [Burkholderia mallei NCTC 10229]
gi|147747433|gb|EDK54509.1| AMP-binding domain protein [Burkholderia mallei FMH]
gi|147752417|gb|EDK59483.1| AMP-binding domain protein [Burkholderia mallei JHU]
gi|148026494|gb|EDK84579.1| AMP-binding domain protein [Burkholderia mallei 2002721280]
gi|160696206|gb|EDP86176.1| AMP-binding enzyme domain protein [Burkholderia mallei ATCC 10399]
gi|238524342|gb|EEP87775.1| AMP-binding enzyme domain protein [Burkholderia mallei GB8 horse 4]
Length = 570
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 200/440 (45%), Gaps = 49/440 (11%)
Query: 20 IPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
+PSLR V++ ++ + ++ D+L S R + + I FTSGTTG
Sbjct: 164 VPSLRTVVTMSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTG 223
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 137
SPKG ++H ++ + + ++ E D PL H G+ S +A + GA VF
Sbjct: 224 SPKGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFP 283
Query: 138 -PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 196
FE + L AV T+L VP + +A L +++ + G P E
Sbjct: 284 GAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIE 341
Query: 197 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 256
MK +++ AYGMTETS P +F + T +S+ + +
Sbjct: 342 TMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RT 381
Query: 257 VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 311
VG+ PH+E K+ + V G + TRG VML YWD A+ + + W+ T
Sbjct: 382 TTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRT 440
Query: 312 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 371
GD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++ E
Sbjct: 441 GDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEE 500
Query: 372 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 431
V A + LR ++ + LR+ C + +K PR +V + P
Sbjct: 501 VCAWIVLRAGET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELP 542
Query: 432 LTSTGKIRRDEVRREVMSHL 451
+T TGK+++ +R ++ L
Sbjct: 543 MTVTGKVQKFVMRERMIDEL 562
>gi|315224019|ref|ZP_07865860.1| AMP-binding enzyme [Capnocytophaga ochracea F0287]
gi|420159021|ref|ZP_14665831.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
gi|314945990|gb|EFS97998.1| AMP-binding enzyme [Capnocytophaga ochracea F0287]
gi|394762888|gb|EJF45063.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
Length = 542
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 189/434 (43%), Gaps = 59/434 (13%)
Query: 22 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 81
+LR V G S F+ + + +T + L L F + V I +TSGTTG+PK
Sbjct: 146 TLRKEVYWGESWQHFLVRGEKVTDEKL-------LSFEEKVQFDDPVNIQYTSGTTGNPK 198
Query: 82 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK-- 139
GV +SH ++ + Y E D P H G+ + IP
Sbjct: 199 GVTLSHHNILNNGYFIGIRMNYTEKDRVCIPVPFYHCFGMVIGNIACTTHGATMVIPNDS 258
Query: 140 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 199
F++ LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 259 FDATKTLEAVEKEKCTSLYGVPTMF--ISELYVLDKQPYDLSSLRTGVMAGALCPPEIMK 316
Query: 200 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 259
++ YGMTETS P G +H V
Sbjct: 317 RVKEQMNMHEITICYGMTETS---------------PVSTQTKIGAPFEKQIHS-----V 356
Query: 260 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 313
G H+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD
Sbjct: 357 GTIHDHLEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATEQVIDEQRWMHSGD 416
Query: 314 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 373
+ +D+ G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+
Sbjct: 417 LAMMDEDGYIHISGRIKDLIIRGGENISPKEIEDFLYTYKGVMDAQVIGVPSKKYGEEVM 476
Query: 374 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFP 431
A ++ +E + LS E L C+ + + +K PR W+ + FP
Sbjct: 477 AWIKPKEG----------------VTLSEEELHDFCKGR-IAHYKVPR---YWKFVEEFP 516
Query: 432 LTSTGKIRRDEVRR 445
+T +GKIR+ E+R
Sbjct: 517 MTISGKIRKVEMRE 530
>gi|86750710|ref|YP_487206.1| long-chain-fatty-acid--CoA ligase [Rhodopseudomonas palustris HaA2]
gi|86573738|gb|ABD08295.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
HaA2]
Length = 525
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 177/393 (45%), Gaps = 52/393 (13%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE------DDVYLHTAPLC 116
AP I +TSGTTG PKG ++SH+ + SL + E DDV L P+
Sbjct: 162 APSDIAIQLYTSGTTGKPKGAMLSHANFL--SLVRAGRDNTPEWNIWSSDDVSLIAMPVF 219
Query: 117 HIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
HIGG M + GA V +F+ L+ EQ +T L VPA M + R ++
Sbjct: 220 HIGGSGWGMMSIYHGAKGVIAREFDPTKVLDFFEQAKITKLFMVPAAMQFVVRQPRAREV 279
Query: 177 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
R +K +L G +P+ L+KE + F K + YGMTET+ ++ + D +E
Sbjct: 280 DFSR--LKYMLYGASPIPAALLKECIDVF-KCGFVQMYGMTETTGTIVALPPED-HVEGL 335
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLR 291
++ A GK P VE+ + DG VG I TR M
Sbjct: 336 ERMRSA-----------------GKALPGVEIAILDPDGKPLPPRQVGEIATRSGSNMAG 378
Query: 292 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
YW+ A G+ WL TGD G +D+ G V++ R I SGGEN+YP EVE+ +
Sbjct: 379 YWNLPEATKKTIDGDNWLRTGDAGYMDEDGYVYIHDRIKDMIISGGENIYPAEVESAICD 438
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
HP + + VVG+ + + E V A V ++ + + + ++ +
Sbjct: 439 HPDVAEVAVVGVPDDQWGEAVKAVVVMKPGKEATAQDIIGFTRTR--------------- 483
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+ GFK P+ + + P ++GKI R +R
Sbjct: 484 --IAGFKTPKS-IDFIPALPRNASGKILRRHLR 513
>gi|76811858|ref|YP_331592.1| AMP-binding protein [Burkholderia pseudomallei 1710b]
gi|167818006|ref|ZP_02449686.1| acyl-CoA synthetase [Burkholderia pseudomallei 91]
gi|254258460|ref|ZP_04949514.1| AMP-binding domain protein [Burkholderia pseudomallei 1710a]
gi|418542357|ref|ZP_13107796.1| AMP-binding domain protein [Burkholderia pseudomallei 1258a]
gi|418548842|ref|ZP_13113940.1| AMP-binding domain protein [Burkholderia pseudomallei 1258b]
gi|76581311|gb|ABA50786.1| AMP-binding enzyme domain protein [Burkholderia pseudomallei 1710b]
gi|254217149|gb|EET06533.1| AMP-binding domain protein [Burkholderia pseudomallei 1710a]
gi|385355749|gb|EIF61910.1| AMP-binding domain protein [Burkholderia pseudomallei 1258a]
gi|385357060|gb|EIF63139.1| AMP-binding domain protein [Burkholderia pseudomallei 1258b]
Length = 576
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 200/440 (45%), Gaps = 49/440 (11%)
Query: 20 IPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
+PSLR V++ ++ + ++ D+L S R + + I FTSGTTG
Sbjct: 170 VPSLRTVVTMSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTG 229
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 137
SPKG ++H ++ + + ++ E D PL H G+ S +A + GA VF
Sbjct: 230 SPKGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGARMVFP 289
Query: 138 -PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 196
FE + L AV T+L VP + +A L +++ + G P E
Sbjct: 290 GAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIE 347
Query: 197 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 256
MK +++ AYGMTETS P +F + T +S+ + +
Sbjct: 348 TMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RT 387
Query: 257 VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 311
VG+ PH+E K+ + V G + TRG VML YWD A+ + + W+ T
Sbjct: 388 TTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRT 446
Query: 312 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 371
GD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++ E
Sbjct: 447 GDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEE 506
Query: 372 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 431
V A + LR ++ + LR+ C + +K PR +V + P
Sbjct: 507 VCAWIVLRAGET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELP 548
Query: 432 LTSTGKIRRDEVRREVMSHL 451
+T TGK+++ +R ++ L
Sbjct: 549 MTVTGKVQKFVMRERMIDEL 568
>gi|453070184|ref|ZP_21973436.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
gi|452761830|gb|EME20129.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
Length = 529
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 187/396 (47%), Gaps = 56/396 (14%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY--GEDDVYLHTAPLCHIGGL 121
P +I +TSGTTG PKG ++H +++ +L+ + + YL T PL H G
Sbjct: 171 PTDTAVILYTSGTTGKPKGAELTHCNMVLNALSANRLFESVPSMHERYLLTLPLFHSFGQ 230
Query: 122 SSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIM-ADLATLIRVKKTWKG 179
+ M A + VGA V +P+F++ +ALE +E+ ++ VP + L L V K+
Sbjct: 231 TVTMNAGICVGATLVLMPRFDATAALEIMEREKISVFAGVPTMYWGLLGVLDEVVKSGVD 290
Query: 180 RDSVKK----ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
++V + ++GG LP E++ + F +++ YG++ETS F
Sbjct: 291 IETVAQNMRCAISGGAALPVEILTQFRERF-GVQILEGYGLSETSPLALFSA-------- 341
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVM 289
P S P+ +G P VE ++ D G VG + RG +VM
Sbjct: 342 ------------PES--DPRPGSIGVPIWGVEARLVDDSWHTIAGPDEVGELAIRGHNVM 387
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
Y+++ A V + W TGD+ +D GN ++V R I GG NVYP E+E VL
Sbjct: 388 KGYFNRPEATAEVMC-DGWFRTGDLARVDTDGNYYIVDRAKDMIVRGGFNVYPREIEEVL 446
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
L HP + + VVG+ + L E VVA V S + SES+ L +
Sbjct: 447 LTHPAVSLVAVVGVPDTSLGEEVVAFVIREPSEEISESD----------------LVEWT 490
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
RE+ + +K PR + + P+T+TGKI + E+ +
Sbjct: 491 REQ-MAAYKYPRR-IEFVPSLPMTATGKILKRELNQ 524
>gi|377822092|ref|YP_004978463.1| AMP-dependent synthetase and ligase [Burkholderia sp. YI23]
gi|357936927|gb|AET90486.1| AMP-dependent synthetase and ligase [Burkholderia sp. YI23]
Length = 576
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 198/446 (44%), Gaps = 49/446 (10%)
Query: 15 LQHTAIPSLRWHVSLGSSSS-DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
L +P LR + +G + +N +++ + + +AP+ A+ I FT
Sbjct: 165 LHAAKLPELRAVIRMGEGKTPGMLNFDEVMHTGRAQEDKTKLDALEAKFAPDDAINIQFT 224
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 133
SGTTG+PKG ++H ++ + + E D PL H G+ A+ + C
Sbjct: 225 SGTTGNPKGATLTHRNIVNNARYIAMAMRLTEQDSLCIPVPLYHCFGMVLAVLACVSTGC 284
Query: 134 HVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
+ P F+ + L AV + T+L VP + +A L ++ + G
Sbjct: 285 AMVFPGEAFDPGATLAAVHEERCTALHGVPTMF--IAELDHPDFAKYDLSRLRTGIMAGS 342
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P E MK ++ +++ AYGMTETS P +F + T + +
Sbjct: 343 PCPIETMKRVVSTMHLSEITIAYGMTETS-------------------PVSFQSSTTDPL 383
Query: 252 HQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGE 306
+ + VG+ PH+E+K+ V G + TRG VM YWD AK + +
Sbjct: 384 DK-RTTTVGRIQPHLEVKIVDPLGKIVPVGETGELCTRGYSVMKGYWDD-EAKTREAIVD 441
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
W+ TGD+ ++D G +VGR + GGEN+YP E+E L +HP + + V G+ +
Sbjct: 442 GWMHTGDLATLDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKVQSVQVFGVPDQ 501
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E V A + +R Q SE E +R+ C + + +K PR ++ +
Sbjct: 502 KYGEEVCAWIVVRPGEQASE----------------EEIREFC-QGQIAHYKIPR-YIRF 543
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHLK 452
P+T TGK ++ +R ++ LK
Sbjct: 544 VDELPMTVTGKAQKFVMRARMIDELK 569
>gi|192290357|ref|YP_001990962.1| long-chain-fatty-acid--CoA ligase [Rhodopseudomonas palustris
TIE-1]
gi|192284106|gb|ACF00487.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
TIE-1]
Length = 525
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 179/393 (45%), Gaps = 52/393 (13%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE------DDVYLHTAPLC 116
AP I +TSGTTG PKG ++SH+ + SL + E DDV L P+
Sbjct: 162 APSDIAIQLYTSGTTGKPKGAMLSHANFL--SLVRAGQDNKPEWNRWSPDDVSLVAMPVF 219
Query: 117 HIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 176
HIGG M + GA V +F+ L+ EQ +T L VPA M + R ++
Sbjct: 220 HIGGSGWGMMGIYHGAKGVIAREFDPTKVLDFFEQSGITKLFMVPAAMQFVVRQPRAREV 279
Query: 177 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
R +K +L G +P+ L+KE + F K + YGMTET+ ++ + D +E
Sbjct: 280 DFSR--LKYMLYGASPIPAALLKECIDVF-KCGFVQMYGMTETTGTIVALPPED-HVEGL 335
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLR 291
++ A GK P VE+ + DG VG I TR M+
Sbjct: 336 ERMRSA-----------------GKALPGVEIAILDPDGKPLPPRQVGEIATRSGSNMVG 378
Query: 292 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
YW+ A G+ WL TGD G +D+ G V++ R I SGGEN+YP EVE+ +
Sbjct: 379 YWNLPDATKKTIDGDNWLRTGDAGYMDEDGYVYIHDRIKDMIISGGENIYPAEVESAICD 438
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
HP + + VVG+ + + E V A V ++ + + + ++ +
Sbjct: 439 HPDVAEVAVVGVPDDQWGESVKAVVVMKPGKEATAQDIIGFTRTR--------------- 483
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+ G+K P+ + + P ++GKI R ++R
Sbjct: 484 --IAGYKTPKS-IDFIPALPRNASGKILRRQLR 513
>gi|134281418|ref|ZP_01768126.1| AMP-binding domain protein [Burkholderia pseudomallei 305]
gi|134247085|gb|EBA47171.1| AMP-binding domain protein [Burkholderia pseudomallei 305]
Length = 576
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 200/440 (45%), Gaps = 49/440 (11%)
Query: 20 IPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
+PSLR V++ ++ + ++ D+L S R + + I FTSGTTG
Sbjct: 170 VPSLRTVVTMSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTG 229
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 137
SPKG ++H ++ + + ++ E D PL H G+ S +A + GA VF
Sbjct: 230 SPKGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFP 289
Query: 138 -PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 196
FE + L AV T+L VP + +A L +++ + G P E
Sbjct: 290 GAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIE 347
Query: 197 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 256
MK +++ AYGMTETS P +F + T +S+ + +
Sbjct: 348 TMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RT 387
Query: 257 VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 311
VG+ PH+E K+ + V G + TRG VML YWD A+ + + W+ T
Sbjct: 388 TTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRT 446
Query: 312 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 371
GD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++ E
Sbjct: 447 GDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEE 506
Query: 372 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 431
V A + LR ++ + LR+ C + +K PR +V + P
Sbjct: 507 VCAWIVLRAGET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELP 548
Query: 432 LTSTGKIRRDEVRREVMSHL 451
+T TGK+++ +R ++ L
Sbjct: 549 MTVTGKVQKFVMRERMIDEL 568
>gi|53724018|ref|YP_104464.1| AMP-binding protein [Burkholderia mallei ATCC 23344]
gi|121601336|ref|YP_994632.1| AMP-binding protein [Burkholderia mallei SAVP1]
gi|126448872|ref|YP_001082538.1| AMP-binding protein [Burkholderia mallei NCTC 10247]
gi|167000139|ref|ZP_02265962.1| AMP-binding domain protein [Burkholderia mallei PRL-20]
gi|52427441|gb|AAU48034.1| AMP-binding enzyme domain protein [Burkholderia mallei ATCC 23344]
gi|121230146|gb|ABM52664.1| AMP-binding enzyme domain protein [Burkholderia mallei SAVP1]
gi|126241742|gb|ABO04835.1| AMP-binding enzyme domain protein [Burkholderia mallei NCTC 10247]
gi|243063942|gb|EES46128.1| AMP-binding domain protein [Burkholderia mallei PRL-20]
Length = 576
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 200/440 (45%), Gaps = 49/440 (11%)
Query: 20 IPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
+PSLR V++ ++ + ++ D+L S R + + I FTSGTTG
Sbjct: 170 VPSLRTVVTMSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTG 229
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 137
SPKG ++H ++ + + ++ E D PL H G+ S +A + GA VF
Sbjct: 230 SPKGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFP 289
Query: 138 -PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 196
FE + L AV T+L VP + +A L +++ + G P E
Sbjct: 290 GAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIE 347
Query: 197 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 256
MK +++ AYGMTETS P +F + T +S+ + +
Sbjct: 348 TMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RT 387
Query: 257 VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 311
VG+ PH+E K+ + V G + TRG VML YWD A+ + + W+ T
Sbjct: 388 TTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRT 446
Query: 312 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 371
GD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++ E
Sbjct: 447 GDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEE 506
Query: 372 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 431
V A + LR ++ + LR+ C + +K PR +V + P
Sbjct: 507 VCAWIVLRAGET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELP 548
Query: 432 LTSTGKIRRDEVRREVMSHL 451
+T TGK+++ +R ++ L
Sbjct: 549 MTVTGKVQKFVMRERMIDEL 568
>gi|87199233|ref|YP_496490.1| long-chain-fatty-acid--CoA ligase [Novosphingobium aromaticivorans
DSM 12444]
gi|87134914|gb|ABD25656.1| AMP-dependent synthetase and ligase [Novosphingobium
aromaticivorans DSM 12444]
Length = 527
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 178/393 (45%), Gaps = 53/393 (13%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI------VGYGEDDVYLHTAPLCHI 118
+ AV+ +TSGTTG+PKG V+S+ L L K +I +D+ L P HI
Sbjct: 165 DDAVLQLYTSGTTGNPKGAVLSNRNLF--GLRKQSIGNDQPYTTMTDDEAILVAMPCAHI 222
Query: 119 GGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
GG + + G + + +FE ++ +AVEQ VT VPA + L
Sbjct: 223 GGTGLGVMAIGAGLPGIVLAEFEPRAVFDAVEQKGVTRFFIVPAALQMLLNHPDCASVDF 282
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
R VK I+ G +P L++E F A+ I AYGMTET+ ++
Sbjct: 283 SR--VKYIIYGASPIPLVLLRECIAMF-SAEFIQAYGMTETTGTICM------------- 326
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYW 293
LP +V N + GKP P VE++V + G + +G I TR ++ ML YW
Sbjct: 327 LPPEDHDVNGNQRMR----SAGKPLPGVEVRVIDENGRSLGPNEIGEIQTRSSNNMLGYW 382
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
+ A T + W+ TGD G +D+ G V++ R I SGGENVYP +VE+ + HP
Sbjct: 383 NLPEATAKTMTPDGWISTGDAGYLDEDGYVYMHDRIKDMIISGGENVYPAQVESAIYGHP 442
Query: 354 GIIGIVVVGIANARLTEMVVA-CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
+ + V+G+ + + E V A CV + + + RE+
Sbjct: 443 DVQEVAVIGVPDEKWGEAVKAVCV-----------------PKPGHTIDPQSIIDWTRER 485
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
L GFK P+ V P +GKI R +R
Sbjct: 486 -LAGFKVPKS-VDVIDALPRNPSGKILRRTLRE 516
>gi|421466015|ref|ZP_15914701.1| AMP-binding enzyme [Acinetobacter radioresistens WC-A-157]
gi|400203526|gb|EJO34512.1| AMP-binding enzyme [Acinetobacter radioresistens WC-A-157]
Length = 561
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 183/396 (46%), Gaps = 59/396 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML- 128
I FTSGTTG+PKG +++H+ ++ + D + PL H G+ M L
Sbjct: 208 IQFTSGTTGNPKGTMLTHNNILNNGYFVGERILLTPQDRVCISVPLFHCFGM--VMGNLA 265
Query: 129 -------MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
MV C VF P S+L+A+EQ T+ VP + +A L +
Sbjct: 266 CVTHGSAMVYPCDVFNPL----SSLKAIEQEKCTAAYGVPTMF--IAMLEHEQFNEFDLS 319
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P E+M+ + +++ YGMTETS ++ ++ D +ET
Sbjct: 320 SLRTGIMAGSPCPREIMQRVIDRMHMSQVTICYGMTETSP-VSAQSMVDDPIET------ 372
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQF 296
+ VG+ PHVE+K+ V G++ TRG VML YW+
Sbjct: 373 -------------RVNTVGRIHPHVEIKIIDRNGKIVPRGKLGQLCTRGYSVMLGYWEDE 419
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
V W+ TGD+ +D G + + GR + GGEN++P+E+E L HP +
Sbjct: 420 EKTKEVIDQTGWMHTGDLAEMDQQGFIQIKGRIKDVVIRGGENLFPKEIEDFLYTHPDVS 479
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ VVG+ + + E + AC+ L SE E++RQ+C+E +++
Sbjct: 480 DVQVVGVPDQKYGEELCACIILHPHSNTSE----------------EIIRQYCKE-HISH 522
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
K PR ++ + FPLT++GK ++ ++R + L
Sbjct: 523 QKVPR-YIRFVTAFPLTASGKAQKYKIREMMQQELN 557
>gi|357040681|ref|ZP_09102466.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355356215|gb|EHG04008.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 466
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 185/388 (47%), Gaps = 53/388 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
+I +TSGTT PKGV++SH + + + V DD+ + APL H+ G AM ML
Sbjct: 119 VISYTSGTTSMPKGVMLSHGNISANAANENLSVCITHDDIVYYPAPLFHVMG-CMAMGML 177
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKI 186
G C + +++++ E ++Q +T ++T L L+ + +K D S++ +
Sbjct: 178 ATG-CTLVFEEYKAEKFYERIQQESITKVVTTAG---PLTMLVNSEINYKQYDLSSLRTV 233
Query: 187 LNGGGGLPSELMKEATNSFPKAKLIS-AYGMTETSSSLTF--MTLYDPTLETPGQLPQAF 243
+ GG +P ++ E N P +++ ++ TE S +T +T D LE
Sbjct: 234 ITGGSPMPGKIATELFNILPNLEVMYVSFAQTEASPFITIDAVTRQD-ILE--------- 283
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
G +S G+ +K+ D + H G I+ RG +VML YW +
Sbjct: 284 GRYNEHS---------GREVFLTRVKIVDDQDNDLPVGHRGEIIARGPNVMLGYW-EMPE 333
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ + + E WL T DIG D G +++V R+ I SG ENV +EVE+VL QHP I
Sbjct: 334 ENTQTLREGWLHTNDIGYFDSNGYLYVVDRKKDMILSGSENVSSKEVESVLYQHPAIADA 393
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+G+++ + E V A + L+ Q E + + CRE NL G+K
Sbjct: 394 AVIGVSDEKWGERVHAVIVLKSGQQE----------------DPEGIIKFCRE-NLAGYK 436
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRRE 446
PR + + P +TGK+ ++ +R +
Sbjct: 437 TPR-SIEFISDLPRNATGKVLKNRLREK 463
>gi|255318758|ref|ZP_05359984.1| acyl-CoA synthetase family member 2 [Acinetobacter radioresistens
SK82]
gi|421855790|ref|ZP_16288165.1| putative long-chain-fatty-acid--CoA ligase [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|255304014|gb|EET83205.1| acyl-CoA synthetase family member 2 [Acinetobacter radioresistens
SK82]
gi|403188799|dbj|GAB74366.1| putative long-chain-fatty-acid--CoA ligase [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 561
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 183/396 (46%), Gaps = 59/396 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML- 128
I FTSGTTG+PKG +++H+ ++ + D + PL H G+ M L
Sbjct: 208 IQFTSGTTGNPKGTMLTHNNILNNGYFVGERILLTPQDRVCISVPLFHCFGM--VMGNLA 265
Query: 129 -------MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
MV C VF P S+L+A+EQ T+ VP + +A L +
Sbjct: 266 CVTHGSAMVYPCDVFNPL----SSLKAIEQEKCTAAYGVPTMF--IAMLEHEQFNEFDLS 319
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P E+M+ + +++ YGMTETS ++ ++ D +ET
Sbjct: 320 SLRTGIMAGSPCPREIMQRVIDRMHMSQVTICYGMTETSP-VSAQSMVDDPIET------ 372
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQF 296
+ VG+ PHVE+K+ V G++ TRG VML YW+
Sbjct: 373 -------------RVNTVGRIHPHVEIKIIDRNGKIVPRGKLGQLCTRGYSVMLGYWEDE 419
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
V W+ TGD+ +D G + + GR + GGEN++P+E+E L HP +
Sbjct: 420 EKTKEVIDQTGWMHTGDLAEMDQQGFIQIKGRIKDVVIRGGENLFPKEIEDFLYTHPDVS 479
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ VVG+ + + E + AC+ L SE E++RQ+C+E +++
Sbjct: 480 DVQVVGVPDQKYGEELCACIILHPHSNTSE----------------EIIRQYCKE-HISH 522
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
K PR ++ + FPLT++GK ++ ++R + L
Sbjct: 523 QKVPR-YIRFVTAFPLTASGKAQKYKIREMMQQELN 557
>gi|332534272|ref|ZP_08410116.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas haloplanktis
ANT/505]
gi|332036268|gb|EGI72740.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 577
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 207/452 (45%), Gaps = 49/452 (10%)
Query: 7 SSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEG 66
+ D + L L+ A+P+L+ + +G +S ++ + + + L + +
Sbjct: 162 TCDKYTLNLK--ALPTLKNIIRIGDEASPGMHSFNDVINLPTAAHELELKAIGENLNADQ 219
Query: 67 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA 126
+ I FTSGTTG+PKG ++H ++ +L + + DD PL H +
Sbjct: 220 DINIQFTSGTTGNPKGATLTHKNILNNALFVAESMHFTSDDKLCIPIPLYHCFAMVLGSL 279
Query: 127 MLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ + P F++K+ L+ V+Q T+L VP + ++ L T +++
Sbjct: 280 LCVSKGAAAIYPSDSFDAKTTLDVVQQEGCTALHGVPTMF--ISELELSNFTDYDLSTLR 337
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P ++M++ +++ AYG TE S + +T D ++E
Sbjct: 338 TGVMAGSTCPEQVMRKVQTQMNMHQVLIAYGQTE-CSPINNITETDSSIER--------- 387
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAK 299
Q VG+ H E+K+ + + G + ++GA +M YW+
Sbjct: 388 ----------QVTTVGRALAHTEVKIIDELGNIQKIGQPGEVCSKGAGIMRCYWNDEAKT 437
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ GE WL +GD+G +D G V +VGR I GGEN+YP E+E VL +PGI
Sbjct: 438 KATIDGEGWLHSGDLGVMDTEGFVTIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAA 497
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
+ GI + + E V A ++ +E + +L+ + +R+ ++K L FK
Sbjct: 498 IFGITDEKYGEEVCAWIQPKE----------------DAVLNEQAIREFLKDK-LAYFKM 540
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
PR + + + +P+T TGK+++ ++R ++ L
Sbjct: 541 PR-HIRFVENYPMTVTGKLQKFKMREQMQEEL 571
>gi|434405865|ref|YP_007148750.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Cylindrospermum stagnale PCC 7417]
gi|428260120|gb|AFZ26070.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Cylindrospermum stagnale PCC 7417]
Length = 525
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 183/397 (46%), Gaps = 58/397 (14%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI------VGYGEDDVYLHTAPLCH 117
P + +TSGTTG PKGV +SH + ++AK + +G+ E D L T PL H
Sbjct: 163 PNDVAVQIYTSGTTGRPKGVQLSHYSFF--AIAKEIVKQGKSWIGWNEYDKSLLTLPLFH 220
Query: 118 IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 177
IGGL A+ L+ GA ++ + F K LEA+E++ +T + VPA++ L + ++T
Sbjct: 221 IGGLWWAIRGLVAGAENILLESFIPKEVLEAIEKYDITKVAMVPAMIQVLLSEPACEQT- 279
Query: 178 KGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG 237
S+ I+ GG + L+K+A +F + YGMTET + +++ D P
Sbjct: 280 -NFLSLGHIVYGGSPISQSLLKKAIATF-SCNFVQVYGMTETGNCAVCLSVDDHVSANPN 337
Query: 238 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRY 292
+L VGKP P V L + ++ VG I + M+ Y
Sbjct: 338 RLKS-----------------VGKPFPGVSLTILNNDGEPLADGQVGEICIKSPANMIGY 380
Query: 293 WDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
W P +T + ++ TGD G D+ G + + R I GGEN+YP E+E +L
Sbjct: 381 WKL----PEATTKTLVDGYIHTGDAGYFDEEGYLHICDRIKDMICYGGENIYPAEIENIL 436
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
+HP I + V+G+ + E V A V L+ + + + K
Sbjct: 437 YEHPAISEVAVIGVPDEYRGETVKAIVVLKAGINATALDIINFVRGK------------- 483
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
+ FK PR V + + P T +GK+++ ++R +
Sbjct: 484 ----IADFKLPR-SVEFTESLPKTPSGKLQKGKLREK 515
>gi|51891936|ref|YP_074627.1| long-chain fatty-acid-CoA ligase, partial [Symbiobacterium
thermophilum IAM 14863]
gi|51855625|dbj|BAD39783.1| putative long-chain fatty-acid-CoA ligase [Symbiobacterium
thermophilum IAM 14863]
Length = 501
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 182/403 (45%), Gaps = 51/403 (12%)
Query: 48 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 107
L GY + P PE +I +T GTTG KG V+SH A++ + IA DD
Sbjct: 144 LSGYPEETPP-APDLDPEDPWMILYTGGTTGRSKGAVLSHRAVLWNAWNTIAGWTLSPDD 202
Query: 108 VYLHTAPLCHIGGLSSAMAMLM-VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMAD 166
P H GGL+ L+ +G C + + F+ L+AVE+ +T + VP +
Sbjct: 203 RVPILTPFFHTGGLNVFTTPLVELGGCSILMGPFDPGELLDAVEKERLTVIFMVPTMFKM 262
Query: 167 LATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM 226
+ R +T R V+ +++GG P + + K+ YG+TE
Sbjct: 263 VMDHPRFAETDFSR--VRFLISGGAACPEPVQLAYRAKGCQFKI--GYGLTEAG------ 312
Query: 227 TLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRI 281
P FG S +P VG P PH++L++ ++ G++ VG +
Sbjct: 313 -------------PNTFGMPDHRSWDKPG--SVGFPLPHIQLRIVAEDGRLCGTNEVGEL 357
Query: 282 LTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 341
L +G HV YW A + + + WL TGD+ D+ G ++VGR+ SGGENV+
Sbjct: 358 LIKGGHVFSGYWRNPEAT-AEALQDGWLHTGDLARRDEEGFYYIVGRKKEMFISGGENVF 416
Query: 342 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLS 401
P EVE + QHP + VVGI + + E+ A V L+ + L+
Sbjct: 417 PLEVEDAIYQHPAVAECAVVGIPDPKWGEVGKAFVVLKPG----------------MRLT 460
Query: 402 SEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
E L +HCR K L +K P+ V + P + GKI + E++
Sbjct: 461 EEELIEHCR-KLLAKYKIPKQ-VEFLPELPKNAAGKILKRELK 501
>gi|409728140|ref|ZP_11271011.1| long-chain acyl-CoA synthetase [Halococcus hamelinensis 100A6]
gi|448723110|ref|ZP_21705635.1| long-chain acyl-CoA synthetase [Halococcus hamelinensis 100A6]
gi|445788065|gb|EMA38787.1| long-chain acyl-CoA synthetase [Halococcus hamelinensis 100A6]
Length = 524
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 181/381 (47%), Gaps = 33/381 (8%)
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIV--GYGEDDVYLHTAPLCHIGGLSSAM-AML 128
+TSGTTG PKGV+++H L + ++ G DD L PL HI G++ M L
Sbjct: 161 YTSGTTGQPKGVLLTHHNLASNARMATDLLPGGTRPDDRSLGVLPLFHIYGMTVTMNTSL 220
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
GA + +P ++++ AL +E +T + VPA+ D+ + + S++ +
Sbjct: 221 FSGAAYYPLPSWDAQQALSLIESEEITIMQGVPAMYNDIVNQPNLDEF--DCSSLRFVNA 278
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
GG LP E+++ F +L YG+TETS F + P PG + Q V
Sbjct: 279 GGSSLPMEVLRRFEEEF-DIELYEGYGLTETSPVTHFNS---PDARRPGSIGQTLPGVEA 334
Query: 249 NSV-HQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST--- 304
V H+ + V P E + DG + G ++ G +VM Y D+ A SV T
Sbjct: 335 KIVDHEFEPVRKVDRGPVDEGETDLDGIT--GELVVSGPNVMKGYHDRPEANESVFTEEG 392
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
G W TGD+G D ++V R I +GG NVYP E+E +L +HP + VVGI
Sbjct: 393 GNRWFHTGDVGYWDAEDFFYIVDREKHMIVTGGYNVYPREIEELLFEHPDVADAAVVGIP 452
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ R E V A V + SE E ++++C + +L +K PR V
Sbjct: 453 DERRGETVKAFVVPTPDSETSE----------------EEIKEYCLD-SLAAYKHPRE-V 494
Query: 425 LWRKPFPLTSTGKIRRDEVRR 445
+ + P T+TGK+++ E+R
Sbjct: 495 EFVEELPRTTTGKVQKFELRE 515
>gi|254262231|emb|CAZ90558.1| hypothetical protein [Enterobacter helveticus]
Length = 518
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 185/404 (45%), Gaps = 59/404 (14%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
+ A II FTSGTTG PKG VI+H L+ A + GEDD + P+ HI GLS+
Sbjct: 154 DDAAIIMFTSGTTGEPKGAVITHGNLLSAVEAYAHGLSLGEDDSTVLAVPIYHITGLSAL 213
Query: 125 MAMLM-VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR-----VKKTWK 178
+A+ + +GA +F + + V + +T L P + L + V +TW
Sbjct: 214 LALFVYLGAAIWLQLRFNAAEVMNTVREQGITFLHGSPTVFILLCQAAKAQSESVPQTWP 273
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
+++ + G G L L++E FP+ + YG+TET+S T
Sbjct: 274 ---TLRAVACGAGHLNEGLVRELKECFPRTAIHPIYGLTETTSPATI------------- 317
Query: 239 LPQ-AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRY 292
PQ +G+ S G+ P +E+ VC D G H+G I +GA V+ Y
Sbjct: 318 FPQDVWGSAKTGS--------SGQAIPGLEIAVCDDEQKPLGPGHIGHIWLKGAVVVSDY 369
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
W + +P+ + E W +TGDIG +D+ G +++ R I GGE +Y E+E +L +
Sbjct: 370 WQRSERRPACN-AEGWFNTGDIGYLDEDGFLFIKDRSKDMINRGGEKIYSIELENILSTY 428
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELL--LSSEVLRQHCR 410
G+ + V+ + E VA + ++ QS ++E+L L ++V R
Sbjct: 429 RGVKEVAVIPAPSPVYGEEPVAFIV---------ADSQQSLTSEEILGWLKAKVAR---- 475
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
FK P + R P T GKI + ++R + H+ L
Sbjct: 476 ------FKLPARIIFTRT-LPRTHNGKISKRQLRARLAEHIPYL 512
>gi|409200096|ref|ZP_11228299.1| AMP-binding domain protein [Pseudoalteromonas flavipulchra JG1]
Length = 584
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 194/457 (42%), Gaps = 49/457 (10%)
Query: 6 ESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPE 65
ES D + EL +PSL+ V + + L + + L + + +
Sbjct: 165 ESYDCMFGELSSQRLPSLKQIVLIDEDIEPGLMNFSTLLSKANDAHYLEANAIAANLSAS 224
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 124
A+ I FTSGTTG+PKG ++HS ++ L + E D PL H G+
Sbjct: 225 DAINIQFTSGTTGNPKGATLTHSNILNNGLLVANAMKLTEQDKLCIPVPLYHCFGMVLGN 284
Query: 125 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
+ + GAC VF F+ LE VE+ T L VP + +A L T S+
Sbjct: 285 LVCISKGACAVFPNDSFDPLVTLEVVEREKCTGLHGVPTMF--IAQLEHSDFTQFDLSSL 342
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + G P ++M++ ++ YG TE S + +T D +E Q
Sbjct: 343 RTGVMAGSTCPEKVMRQVQTQMHMTDVLIGYGQTECSP-INNITEIDSPVEKRVQ----- 396
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 297
VG+ PH E+K+ D H+ G + RG VM YW
Sbjct: 397 --------------TVGRAMPHTEVKII-DELGHIAPIGTPGEVCARGYCVMKGYWQDPE 441
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ + WL +GD+G +DD G V +VGR I GGEN+YP E+E VL H I
Sbjct: 442 KTAATIDNDGWLHSGDLGVMDDEGFVSIVGRIKDMIIRGGENIYPREIEEVLYHHHDIQD 501
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
V GI + + E V V+L+ SE + +R ++K L F
Sbjct: 502 AAVFGIKDEKYGEEVCVWVQLKPGHYISEQD----------------IRIFLKDK-LAYF 544
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 454
K P+ L +P+T TGK+++ ++R ++ S L +
Sbjct: 545 KVPKHIKLVEN-YPMTVTGKLQKFKMREQMESELDAF 580
>gi|398906734|ref|ZP_10653576.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM50]
gi|398172501|gb|EJM60362.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM50]
Length = 565
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 195/447 (43%), Gaps = 49/447 (10%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICF 72
+LQ +P LR +SL + LT D+ S+ L S + AV I +
Sbjct: 156 QLQGERLPELRGVISLDAQPPSGFLPWSQLT-DLAASVSVEQLRERQDSLHFDQAVNIQY 214
Query: 73 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGA 132
TSGTTG PKG +SH ++ +G +D + PL H G+ +
Sbjct: 215 TSGTTGFPKGATLSHYNILNNGYMVGESLGLTANDRLVIPVPLYHCFGMVMGNLGCVTHG 274
Query: 133 CHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 190
+ P F+ L V + T+L VP + +A L + K+ S++ + G
Sbjct: 275 STMIYPNDAFDPLLTLSTVAEEKATALYGVPTMF--IAMLDQPKRAEFDLSSLRTGIMAG 332
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
P E+M+ N +++ AYGMTETS +L+T P+
Sbjct: 333 ATCPIEVMRRVINEMHMSEVQIAYGMTETSPV---------SLQT-----------GPSD 372
Query: 251 VHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTG 305
+ + VG+ P +E K+ + + V G + TRG VML YW+
Sbjct: 373 ELELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDE 432
Query: 306 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 365
W+ TGD+ S++D G V + GR I GGENVYP E+E HP + + V+GI
Sbjct: 433 AGWMHTGDLASMNDEGYVCIAGRNKDMIIRGGENVYPRELEEFFFTHPAVADVQVIGIPC 492
Query: 366 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 425
+R E +VA W + + S+ +E L+ C+E+ + FK PR F
Sbjct: 493 SRYGEEIVA---------WIKFHPGHSATEQE-------LQAWCKER-IAHFKTPRYFKF 535
Query: 426 WRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ FP+T TGKI++ +R + L+
Sbjct: 536 VEE-FPMTVTGKIQKFRMREISVEELR 561
>gi|448728126|ref|ZP_21710458.1| long-chain acyl-CoA synthetase [Halococcus saccharolyticus DSM
5350]
gi|445797560|gb|EMA48031.1| long-chain acyl-CoA synthetase [Halococcus saccharolyticus DSM
5350]
Length = 528
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 200/427 (46%), Gaps = 46/427 (10%)
Query: 27 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 86
VS+G + + L AD P A + + +TSGTTG PKGV+++
Sbjct: 126 VSVGGDAEGATQFEEFLVADA---------PDVVERADDDVAVQPYTSGTTGQPKGVLLT 176
Query: 87 HSALIVQSLAKIAIV--GYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESK 143
H L + + ++ G DD L PL HI G++ M L GA + +P+++++
Sbjct: 177 HENLASNARMAMDLLPGGTTTDDRSLGVLPLFHIYGMTVVMNTSLFAGAAYYPLPEWDAQ 236
Query: 144 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 203
+AL +E +T + VPA+ D+ V + S++ + +GG LP E++++
Sbjct: 237 TALGLIESEALTIMQGVPAMYNDVINQPNVDEF--DLSSLRFVNSGGSSLPVEVLRQFEA 294
Query: 204 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ---PQGVCVG 260
F +L YG+TETS F + P G + Q+ V V + P
Sbjct: 295 QF-GIELYEGYGLTETSPVTHFNS---PDARRVGSIGQSLPGVDSMVVDEDFEPVEPVAE 350
Query: 261 KPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST---GEVWLDTGDIGSI 317
P E +D + G ++ G +VM Y D+ A V T G+ W TGD+G
Sbjct: 351 GPVDESE----TDLDAITGELVIAGPNVMAGYHDRPEANEEVFTEHDGKRWFHTGDVGYS 406
Query: 318 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 377
D+ ++V R I +GG NVYP EVE +L +HP + VVGI + R E V A V
Sbjct: 407 DEDEFFYIVDREKHVIVTGGYNVYPREVEELLFEHPNVADAAVVGIPDERRGETVKAFV- 465
Query: 378 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 437
+S+ +++E ++++C + NL +K PR V + + P T+TGK
Sbjct: 466 ----VPVPDSD-----------VTAEEIKEYCLD-NLAEYKHPRE-VAFVEELPRTTTGK 508
Query: 438 IRRDEVR 444
+++ E+R
Sbjct: 509 VQKFELR 515
>gi|455641051|gb|EMF20249.1| AMP-binding domain protein [Streptomyces gancidicus BKS 13-15]
Length = 530
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 170/386 (44%), Gaps = 49/386 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MA 126
V I +TSGTTG PKG +SH ++ ++ Y E D P H G+ +A
Sbjct: 179 VNIQYTSGTTGFPKGATLSHHNILNNGYFVGELIDYSEQDRVCIPVPFYHCFGMVMGNLA 238
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
GAC V P F+ + L AV+Q TSL VP + +A L S++
Sbjct: 239 ATSHGACMVIPAPSFDPAATLRAVQQERCTSLYGVPTMF--IAELNLPDFASYDLTSLRT 296
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+MK ++ YGMTETS P +
Sbjct: 297 GIMAGSPCPVEVMKRVVAEMHMEQVSICYGMTETS-------------------PVSLQT 337
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAK 299
+ + G VG+ PH+E+K+ + G + TRG VML YWD+
Sbjct: 338 RMEDDLEHRTGT-VGRVLPHIEVKIVDPATGVTVPRGTSGELCTRGYSVMLGYWDEPEKT 396
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
W+ TGD+ + D G V +VGR I GGEN+YP E+E L HP + +
Sbjct: 397 AEAIDRGRWMHTGDLAVMRDDGYVEIVGRIKDMIIRGGENIYPREIEEFLYGHPKVADVQ 456
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VVG+ + R E V+ACV R+ L L+ L +C + L +K
Sbjct: 457 VVGVPHERYGEEVLACVIPRD-------------PADPLTLAE--LHAYC-DGQLAHYKV 500
Query: 420 P-RLFVLWRKPFPLTSTGKIRRDEVR 444
P RL +L + FP+T +GK+R+ E+R
Sbjct: 501 PSRLELL--ETFPMTVSGKVRKIELR 524
>gi|27378059|ref|NP_769588.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobium japonicum USDA
110]
gi|27351205|dbj|BAC48213.1| bll2948 [Bradyrhizobium japonicum USDA 110]
Length = 525
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 177/386 (45%), Gaps = 49/386 (12%)
Query: 69 IICFTSGTTGSPKGVVISHSALI--VQS---LAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
I +TSGTTG PKG ++SH+ + VQ+ K + DDV L P+ HIGG
Sbjct: 167 IQLYTSGTTGKPKGAMLSHANFLNLVQTGNAADKPEWNRWSTDDVSLVAMPIFHIGGSGW 226
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
+ L GA V +F+ L+ EQ +T L VPA M + R K R +
Sbjct: 227 GVMGLYHGARGVIAREFDPTKVLDFFEQSGITKLFMVPAAMQFVVRQPRAKTVDFSR--L 284
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
K +L G +P+ L+KE F K + YGMTET+ ++ + D +E ++ A
Sbjct: 285 KYMLYGASPIPAALLKECIEVF-KCGFVQMYGMTETTGTIVALPPED-HVEGLERMRSA- 341
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLA 298
GK P VE+ + +DG VG I TR M YW+ A
Sbjct: 342 ----------------GKALPGVEIAILDADGKPLPPRQVGEIATRSGSNMAGYWNLPEA 385
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
S G+ WL TGD G +D+ G +++ R I SGGENVYP EVE+ L HP +
Sbjct: 386 TASTLRGDGWLRTGDAGYMDEDGYLYIHDRIKDMIISGGENVYPAEVESALCDHPDVAEA 445
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+G+ + + E V A V ++ Q + ++ + RE+ + GFK
Sbjct: 446 AVIGVPDDKWGEAVKAVVVMKPGKQATATD----------------IINFTRER-IAGFK 488
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVR 444
P+ V + P +GKI R ++R
Sbjct: 489 TPKS-VEFLPTLPRNPSGKILRRQLR 513
>gi|108804692|ref|YP_644629.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
gi|108765935|gb|ABG04817.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
Length = 507
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 176/398 (44%), Gaps = 60/398 (15%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
++ +TSGTTG PKGV +SH+ L+ A + + E+DV +H PL H GL A L
Sbjct: 159 LLAYTSGTTGRPKGVPLSHANLLSSIRAVMRAWRWCENDVLVHALPLSHQHGLGGVHASL 218
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG-RD----SV 183
+ GA V KF+ A+E T L VPAI L W+G RD S+
Sbjct: 219 LAGARAVVHSKFDPGRLCAAIESESATVLFAVPAIYERLV-------EWEGIRDVNFSSL 271
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ ++G L EL + + ++ YG TE S L+ YD P+ F
Sbjct: 272 RLAVSGSAALSPELAHRVSAVLGR-DVLERYGSTE--SGLSVSNPYDG--------PRKF 320
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLA 298
G+ VG P P EL + D + G I+ RG V YW+ A
Sbjct: 321 GS-------------VGLPLPGTELAIVDDHGCCMPPGNAGEIVLRGPQVFSGYWNLPDA 367
Query: 299 KPSVSTGEVWLDTGDIGSIDDG-GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
W TGDIG +D G G + + GR I SGG NVYP EVE VL HP +
Sbjct: 368 TRDSFYPGGWFRTGDIGRVDPGDGYLTITGRSKELIISGGLNVYPREVELVLESHPAVDR 427
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
VVG+ + R E VVA V ++ N SSK L H RE +L+G+
Sbjct: 428 AAVVGVPSERWGEEVVAFV------VPAQGNMVDSSK----------LASHVRE-HLSGY 470
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLP 455
K P+ F L P GK+ R+E+ R ++ P
Sbjct: 471 KCPKRF-LKIDELPRNEVGKVLRNELVRIAGEEARAGP 507
>gi|91978279|ref|YP_570938.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB5]
gi|91684735|gb|ABE41037.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB5]
Length = 518
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 168/376 (44%), Gaps = 30/376 (7%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG KGV++SH+ L+ +L + + VYLH AP+ H+ ++ ++L+
Sbjct: 162 IFYTGGTTGRSKGVMLSHTNLMANALNALGEGLFPGTSVYLHAAPMFHLANGAAMYSLLL 221
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G +V +P F + + ++ VT ++ VP M + KT+ S+K I G
Sbjct: 222 SGGSNVMVPAFTPEGVMATIQNERVTDVLLVPT-MIQMFVDHPALKTYD-LSSLKNITYG 279
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ ++ A+ + P + AYGMTE S T + + E + Q
Sbjct: 280 ASPISEAVLARASAALPDVQFTQAYGMTELSPIATLLHWKEHIGEGKAKGRQRAAGCAAL 339
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 309
P PH VG I RG +VM+ YW++ G W+
Sbjct: 340 GCEVRIVDADDTPLPH----------GTVGEICVRGDNVMMGYWERPEETARALAGG-WM 388
Query: 310 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 369
TGD G +D+ G V++V R I SGGENVY EVE + QHP + V+GI +
Sbjct: 389 HTGDGGYMDEHGFVFVVDRVKDMIISGGENVYSVEVENAVAQHPAVAQCAVIGIPHEAWG 448
Query: 370 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 429
E V A V + ++++ L HC+ + G+K PR + P
Sbjct: 449 EQVHAVVVTKAG----------------ATVTADELIAHCKAL-IAGYKCPRSVDITETP 491
Query: 430 FPLTSTGKIRRDEVRR 445
PL+ GKI + E+R+
Sbjct: 492 LPLSGAGKILKRELRQ 507
>gi|108798485|ref|YP_638682.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119867586|ref|YP_937538.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
gi|108768904|gb|ABG07626.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119693675|gb|ABL90748.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
Length = 515
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 180/385 (46%), Gaps = 52/385 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCHIGGLSSAMAML 128
I +T GTTG+PKGV++SH+ L+ +L ++ + E LH+AP+ H+ S +A
Sbjct: 163 IYYTGGTTGTPKGVMLSHANLMAAALGALSTGQFLEPRGRLLHSAPMFHLADGSGWLARN 222
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+VG HV +P F + AVE++ +T + P ++ + S+K ++
Sbjct: 223 LVGGTHVILPSFTPDAVAVAVERYQITDMFLAPTMIQMFVDSPAAAQ--HDLSSLKHLIY 280
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT---LYDPTLETPGQLPQAFGN 245
G + +++ A P+ KL+ AYGMTE S + T +T DP L
Sbjct: 281 GASPISQAVLERAMRLLPQVKLLQAYGMTELSPTTTVLTGEEHLDPALLR---------- 330
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKP 300
G+ P E+K+ + + V G + RG HVML YW++
Sbjct: 331 ------------SAGRAVPIAEVKIVDEDDNEVPRGTVGEVAARGPHVMLGYWNRPEETA 378
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
G W+ TGD G +DD G +++V R I +GGENVY EVE L QH + V
Sbjct: 379 QALRGG-WMHTGDGGYLDDNGYLFIVDRIKDMIVTGGENVYSAEVENALAQHASVATCAV 437
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ +A E V A V L+E + +++ LR HC + +KAP
Sbjct: 438 IGVPDADWGERVHAVVVLQEG----------------MTATAQELRDHCGSL-IARYKAP 480
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRR 445
R V + PLT+ K+ + ++R+
Sbjct: 481 RT-VDFVDSLPLTAAAKVSKVDLRQ 504
>gi|398951912|ref|ZP_10674415.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
gi|398155734|gb|EJM44169.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
Length = 519
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 200/450 (44%), Gaps = 49/450 (10%)
Query: 1 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH 60
+L+ DE+ L L +PSLR + +G D ML + L R+ P
Sbjct: 101 VLLVDETFKDIGLRLSRQ-VPSLRHVIYVG----DGTTPDGMLDYETLIA---RASPMED 152
Query: 61 SWAPEGAVI-ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIG 119
+ +++ + +T GTTG PKGV+ISH+A +A D V L AP+ H+
Sbjct: 153 ARRGGDSLLGVFYTGGTTGFPKGVMISHTAFWSSQIALDVEGLVPPDSVMLRAAPMFHLA 212
Query: 120 GLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
+S+ ++ GA HV +P F+ A+ A+++H + + VP ++ L V
Sbjct: 213 DMSTGYVGVLEGATHVILPAFQPAEAMAAIQRHGIQVAMLVPTMIQLLINHPEVDD--YD 270
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
S++ ++ G + + + P+ +L AYG TE S ++L P T
Sbjct: 271 LSSLQHLVYGASPIQEQTLWSLQAMLPQLQLFQAYGQTEMSP---IVSLLGPAQHTAEAA 327
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWD 294
G+ VE+K+ D V G I+ RG + M Y +
Sbjct: 328 AAGMLR------------SCGRATRAVEVKIVDDDGREVPRGSIGEIVVRGPNAMSGYLN 375
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
+ S G+ WL TGD +D+ G +++V R I +GGENV+ EVE L HP
Sbjct: 376 KPEQTLSALPGDGWLRTGDGARMDENGYIFIVDRLKDMIVTGGENVFSAEVENALCSHPD 435
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
I V+GI + + E V A V L+ + N E L++ HC+ + +
Sbjct: 436 IAMCAVIGIPSEQWGEAVHAVVVLKPG----------TEPNGEELIA------HCK-RQI 478
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
G+KAP+ V +R PL+ GK+ + E+R
Sbjct: 479 AGYKAPK-SVEFRAALPLSGAGKVLKSELR 507
>gi|323358575|ref|YP_004224971.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Microbacterium testaceum StLB037]
gi|323274946|dbj|BAJ75091.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Microbacterium testaceum StLB037]
Length = 512
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 183/398 (45%), Gaps = 65/398 (16%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS- 122
P+ + +TSGTTG PKG V++H L ++ + DDV L +PL H+ L
Sbjct: 161 PDAPAAVVYTSGTTGRPKGAVLTHENLTAVAVNTVIDYDVVSDDVALMISPLFHVASLGM 220
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPA---IMADLATLIRVKKTWKG 179
A+ +++ G V FE+ AL+ +EQH VT + VP +MAD +W
Sbjct: 221 GALPVVLKGGTLVLEKGFEAGRALDLIEQHRVTMISGVPTTFQLMAD-------HPSWAS 273
Query: 180 RD--SVKKILNGGGGLPSELMK---EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 234
D S+ + GG +P +++ E SF + YGMTETS T
Sbjct: 274 TDISSLHTLTCGGSAVPDRILRAWEERGLSFSQG-----YGMTETSPGAT---------- 318
Query: 235 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVM 289
++ P+ QG VG P E++V D + VG I G +V
Sbjct: 319 ----------SLAPHMTRAKQG-SVGLPHFFTEVRVVDDERRPVPAGTVGEIHVSGPNVF 367
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
+ Y A + T + W +GD+G +D G +++ GR I SGGEN+YP EVEA++
Sbjct: 368 VGYLGLDDATRAAKTDDGWFRSGDLGYLDADGYLYICGRSKDMIISGGENIYPAEVEALI 427
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
PG+ G+ V+GI + R E+ +A V + E + + + V+R H
Sbjct: 428 SDIPGVTGVAVIGIPDDRWGEVPLAVVTVAEGAE----------------VDTAVVRAHL 471
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 447
+ + +K P+ V+ P T++GKI + E+R +
Sbjct: 472 -DGQVARYKLPKEVVVI-DALPRTASGKIVKAELRERL 507
>gi|237814343|ref|YP_002898794.1| AMP-binding domain protein [Burkholderia pseudomallei MSHR346]
gi|237505976|gb|ACQ98294.1| acyl-CoA synthetase family member 2 [Burkholderia pseudomallei
MSHR346]
Length = 576
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 200/440 (45%), Gaps = 49/440 (11%)
Query: 20 IPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
+PSLR V++ ++ + ++ D+L S R + + I FTSGTTG
Sbjct: 170 VPSLRTVVTMSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTG 229
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 137
SPKG ++H ++ + + ++ E D PL H G+ S +A + GA VF
Sbjct: 230 SPKGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGARMVFP 289
Query: 138 -PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 196
FE + L AV T+L VP + +A L +++ + G P E
Sbjct: 290 GAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIE 347
Query: 197 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 256
MK +++ AYGMTETS P +F + T +S+ + +
Sbjct: 348 TMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RT 387
Query: 257 VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 311
VG+ PH+E K+ + V G + TRG VML YWD A+ + + W+ T
Sbjct: 388 TTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRT 446
Query: 312 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 371
GD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++ E
Sbjct: 447 GDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEE 506
Query: 372 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 431
V A + LR ++ + LR+ C + +K PR +V + P
Sbjct: 507 VCAWIVLRAGET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELP 548
Query: 432 LTSTGKIRRDEVRREVMSHL 451
+T TGK+++ +R ++ L
Sbjct: 549 MTVTGKVQKFVMRERMIDEL 568
>gi|148658689|ref|YP_001278894.1| AMP-dependent synthetase and ligase [Roseiflexus sp. RS-1]
gi|148570799|gb|ABQ92944.1| AMP-dependent synthetase and ligase [Roseiflexus sp. RS-1]
Length = 512
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 185/393 (47%), Gaps = 52/393 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
+IC+T GTTG PKG +++H + ++ +A G DDV + APL H GGL+ A L
Sbjct: 164 VICYTGGTTGLPKGAILTHGNIFFNAVNTVAGWGLRPDDVTILNAPLFHTGGLNVFTAPL 223
Query: 129 M-VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 185
+G + +F+ + +E+ VT VP + L R W+ D V+
Sbjct: 224 AHIGGTSIVCRQFDPDQVFDLIERQGVTIYFGVPTMFLALQRHPR----WETADFSRVRW 279
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+++GG P + + T + YG+TE + ++
Sbjct: 280 MISGGAPCPPPVFE--TFRRRGVPFRTGYGLTEAGPNTFWL------------------- 318
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKP 300
P+ + + VG P PH++L++ ++ + VG + RGAHV YW + + +
Sbjct: 319 --PDEDIERKAGAVGYPLPHIDLRLVNERGDLCAAGEVGELHIRGAHVCAGYWRRPV-ET 375
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+ + + WL TGD+ D+ G +VGR I SGGEN+YP EVEAVL HP + + +
Sbjct: 376 AATIVDGWLRTGDLARRDEEGCYTIVGRLKDVIISGGENIYPAEVEAVLAGHPAVAEVAL 435
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G + E+ A V L E+++ QS+++ E L +CR++ L +K P
Sbjct: 436 IGAPDPTWVEVGWAVVVLHEAFR-------QSAQDIE-----RQLIDYCRDR-LARYKIP 482
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
+ ++ P T GKI + +R M H++
Sbjct: 483 KRVIV-VDALPRTGAGKIDKRALR--AMLHVEG 512
>gi|359424079|ref|ZP_09215204.1| putative acid--CoA ligase [Gordonia amarae NBRC 15530]
gi|358240650|dbj|GAB04786.1| putative acid--CoA ligase [Gordonia amarae NBRC 15530]
Length = 503
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 184/382 (48%), Gaps = 36/382 (9%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ ++ FTSGTT PK V I+H+ L + + D L P HI G+S+
Sbjct: 140 PDALAVVLFTSGTTSKPKAVEITHANLTSYVMGTVDFASADPADAALICVPPYHIAGVSA 199
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
A++ L G +++ +F+ + L+ V VT+ VP ++ + + +K ++
Sbjct: 200 ALSNLYAGRRAIYLQRFDPAAWLQLVHDEGVTNATVVPTMLDRI--IAAYEKEPVELPTL 257
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + GG +P L++ + L++AYG+TETSS++ + P +A+
Sbjct: 258 RNLAYGGSKVPQPLVRRTLDLLGHVGLVNAYGLTETSSTIAVLG--------PDDHREAY 309
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLA 298
+ P ++ + G VG+ P +EL++ G+ G + RG V +Y
Sbjct: 310 VSDDP-AIARRLG-SVGRAVPGIELQIRDADGTVLGADGTGELFIRGPQVSGKYT----G 363
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
SV E W T D+ SID G +++ GR + I GGEN+ P EVE VL++HP I +
Sbjct: 364 IGSVLDAEGWFPTKDVASIDADGYLFIGGRSDDTIIRGGENIAPAEVEDVLVEHPRIRDV 423
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V VG+ + + +VA V +RE ++ D L +E +R R + L G +
Sbjct: 424 VAVGVPDPEWGQAIVAVV-VRED---GVTDAD---------LDAEAVRDFARTR-LRGSR 469
Query: 419 APRLFVLWRKPFPLTSTGKIRR 440
P V++R P T+TGKI R
Sbjct: 470 TPD-HVVFRDELPSTATGKILR 490
>gi|291441634|ref|ZP_06581024.1| AMP-dependent synthetase and ligase [Streptomyces ghanaensis ATCC
14672]
gi|291344529|gb|EFE71485.1| AMP-dependent synthetase and ligase [Streptomyces ghanaensis ATCC
14672]
Length = 489
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 179/387 (46%), Gaps = 42/387 (10%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ FTSGT+G PK V+ + L+ L+ + ++ GED+ L + P HI G+SS + +
Sbjct: 139 LLFTSGTSGEPKAAVLRPAHLVSYVLSTVDLLSAGEDEALLVSVPPYHIAGISSLLTSVF 198
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G + +P F+ + +E + VT + VP ++ + ++ + + +++ + G
Sbjct: 199 AGRRLLMLPSFDPAAWVELAHEEAVTHAMVVPTMLGRILDVLEAEG--RTLPALRHLSYG 256
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
GG +P +++ A P L++AYG+TETSS++ + D +P+
Sbjct: 257 GGRMPLPVVERALRLLPHVDLVNAYGLTETSSTIAVLGPQD----------HRDALASPD 306
Query: 250 SVHQPQGVCVGKPAPHVELKV-CSDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVST 304
+ + VG+P P VEL++ DG + G I RG V Y + +
Sbjct: 307 PAVRARLGSVGRPLPSVELQIRDEDGRTLPPGEPGEIHVRGEQVSGEYLTH-----TATD 361
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
GE W T D G +D G ++L GR + I GGEN+ P E+E LL HP + +V G
Sbjct: 362 GEGWFPTRDRGWLDAEGYLFLDGRADDVIVRGGENLSPGEIEDALLAHPAVADAIVFGTP 421
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+ E+ VA V LR + +E LR R + L K P V
Sbjct: 422 DVEWGEVPVAAVVLRAPVEEAE------------------LRDFVRAR-LRSAKTP-ARV 461
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMSHL 451
L R P T TGK R +R E+ + L
Sbjct: 462 LVRDALPHTDTGKPLRRVLRAELPASL 488
>gi|309791565|ref|ZP_07686062.1| acyl-CoA synthase [Oscillochloris trichoides DG-6]
gi|308226386|gb|EFO80117.1| acyl-CoA synthase [Oscillochloris trichoides DG6]
Length = 564
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 182/390 (46%), Gaps = 48/390 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SH +I ++ + D + PL H G + + +
Sbjct: 204 IQYTSGTTGYPKGATLSHHNIINNGYFVAELMNFTHQDRLIIPVPLYHCFGMVMGNLGCI 263
Query: 129 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA ++ + F++ + L+AVE T+L VP + +A L + S++ +
Sbjct: 264 THGATMIYPSEGFDALAVLQAVEAERATALYGVPTMF--IAELEHPEFANFDLKSLRTGV 321
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK + + YGMTETS T + P + G
Sbjct: 322 MAGSPCPIEVMKRVQSQMHMRDVEICYGMTETSPVSTQTRMGTPLDKQVG---------- 371
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
VG+ PHVE+K+ + + + G + TRG VML YWD A
Sbjct: 372 ----------TVGQVHPHVEVKIINPLTGRMVPVGETGELCTRGYSVMLGYWDNESATRG 421
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGD+ ++DD G V +VGR I GGENVYP E+E L HP + + V+
Sbjct: 422 AIDPGRWMHTGDLATMDDEGYVNIVGRIKDMIIRGGENVYPREIEEFLYSHPKVSDVQVI 481
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E ++A ++L+ +S+ ++E +R CR + + +K PR
Sbjct: 482 GVPDIKYGEEIMAWIKLKPG---------ESADDEE-------IRTFCRGQ-IAHYKIPR 524
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
++ + FP+T TGKI++ +R++ + L
Sbjct: 525 -YIKFVDAFPMTVTGKIQKFLMRQQSIQDL 553
>gi|262378975|ref|ZP_06072132.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter radioresistens
SH164]
gi|262300260|gb|EEY88172.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter radioresistens
SH164]
Length = 561
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 183/396 (46%), Gaps = 59/396 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML- 128
I FTSGTTG+PKG +++H+ ++ + D + PL H G+ M L
Sbjct: 208 IQFTSGTTGNPKGTMLTHNNILNNGYFVGERILLTPQDRVCISVPLFHCFGM--VMGNLA 265
Query: 129 -------MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
MV C VF P S+L+A+EQ T+ VP + +A L +
Sbjct: 266 CVTHGSAMVYPCDVFNPL----SSLKAIEQEKCTAAYGVPTMF--IAMLEHEQFNEFDLS 319
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ + G P E+M+ + +++ YGMTETS ++ ++ D +ET
Sbjct: 320 SLRTGIMAGSPCPREIMQRVIDRMHMSQVTICYGMTETSP-VSAQSMVDDPIET------ 372
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQF 296
+ VG+ PHVE+K+ V G++ TRG VML YW+
Sbjct: 373 -------------RVNTVGRIHPHVEIKIIDRNGKIVPRGKLGQLCTRGYSVMLGYWEDE 419
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
V W+ TGD+ +D G + + GR + GGEN++P+E+E L HP +
Sbjct: 420 EKTKEVIDQTGWMHTGDLAEMDQEGFIQIKGRIKDVVIRGGENLFPKEIEDFLYTHPDVS 479
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ VVG+ + + E + AC+ L SE E++RQ+C+E +++
Sbjct: 480 DVQVVGVPDQKYGEELCACIILHPHSNTSE----------------EIIRQYCKE-HISH 522
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
K PR ++ + FPLT++GK ++ ++R + L
Sbjct: 523 QKVPR-YIRFVTAFPLTASGKAQKYKIREMMQQELN 557
>gi|227549740|ref|ZP_03979789.1| acyl-CoA synthetase [Corynebacterium lipophiloflavum DSM 44291]
gi|227078175|gb|EEI16138.1| acyl-CoA synthetase [Corynebacterium lipophiloflavum DSM 44291]
Length = 573
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 206/455 (45%), Gaps = 74/455 (16%)
Query: 22 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW-APE-----GAVIICFTSG 75
+L++ ++L RD LT D SL + APE ++I +TSG
Sbjct: 159 ALKYRLALSLPLPKTRQLRDQLTGDAPATMPWSSLLLDKPFEAPEEITQDDTILILYTSG 218
Query: 76 TTGSPKGVVISH---SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM-VG 131
TTG PKG I+H ++++ LA + +G ++ + + PL H+ GL+ M + + G
Sbjct: 219 TTGPPKGAQITHGNLNSMLKTGLAWVKDLGKEQEKI-MAILPLFHVYGLALTMGLAIGTG 277
Query: 132 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLA-TLIRVKKTWKGRDSVKKILNGG 190
A + +P E A++++ T VP + +A I KT+ +++ +G
Sbjct: 278 AELILVPAPEPPLIAMAMKKNPPTFFPGVPTLYEKIAEAAIANDKTYP---TIRNSFSGA 334
Query: 191 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 250
LP +++ N +L+ YG+TETS LT + +
Sbjct: 335 STLPESTIEKWEN-ITGGRLVEGYGLTETSPILTANPM--------------------DG 373
Query: 251 VHQPQGVCVGKPAPHVELKVCS---------DGSSHVGRILTRGAHVMLRYWDQFLAKPS 301
H+P +G P P+ E+++ + DG G +L RG V Y L KP
Sbjct: 374 NHRPG--YIGLPFPNTEIRIANPDNLDETMPDGEP--GELLARGPQVFKGY----LNKPE 425
Query: 302 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ W TGD+G ++ G V LV R I +GG NVYP+EVE V+ +HP I I
Sbjct: 426 ATEKAFHDGWFRTGDMGVMESDGFVRLVSRIKEMIITGGFNVYPDEVEKVMKEHPDIDDI 485
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG +E VVACV LRE ++ S+ L ++ RE+ LT +K
Sbjct: 486 AVVGRPRTDGSEDVVACVTLREG----------------AVIESDALHEYARER-LTAYK 528
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
PR F + + TGKIRR EV+ ++ L+
Sbjct: 529 VPRTFYHFEE-LARDMTGKIRRREVQETLIEMLEE 562
>gi|312199123|ref|YP_004019184.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
gi|311230459|gb|ADP83314.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
Length = 510
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 177/381 (46%), Gaps = 48/381 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAML 128
+ +TSGTTG PKGV+I+++ L ++ A I G+ D+ L PL H+G L +++
Sbjct: 168 LMYTSGTTGRPKGVMITYANLAWKNYAHITEFGFTAADIGLACGPLYHVGALDLVTTSII 227
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
VG F++ A++ +E +T + PA++ + L ++ + SV+ ++
Sbjct: 228 AVGGTTHIHRTFDAARAVDDIEASRITVVWLAPAMVRAILDLPGIED--RDLSSVRVLIG 285
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
GG +P L+ FP A AYG+TET S TF+
Sbjct: 286 GGEKMPLPLIDRIQKVFPSAWFADAYGLTETVSGDTFLD--------------------A 325
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVS 303
S+ +G VG+ ++EL + D + G I+ RG V YW A
Sbjct: 326 ASIRAKRG-SVGRECLYLELDIWDDAGRSLPAGEAGEIVLRGPKVFKGYWRDPEATERAF 384
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
G W TGDIG D+ G V++V R I SGGEN+ EVE VL +HP ++ V+G
Sbjct: 385 AGG-WFHTGDIGIRDEDGYVFIVDRLKDMILSGGENIAGSEVERVLYEHPAVLEAAVIGR 443
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ + E+ VA V LR S+ EL+ +HCR +L FK P+
Sbjct: 444 PDEKWGEVPVAFVALRPG---------TSATADELV-------EHCR-GSLAKFKVPKA- 485
Query: 424 VLWRKPFPLTSTGKIRRDEVR 444
V + + P +GK+ + E+R
Sbjct: 486 VTFIEALPRNPSGKVLKRELR 506
>gi|298247014|ref|ZP_06970819.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
gi|297549673|gb|EFH83539.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
Length = 517
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 182/406 (44%), Gaps = 46/406 (11%)
Query: 45 ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYG 104
AD++ G S+ P E I +TSGTTG+ K + S + + + +
Sbjct: 141 ADVVTGASIDEPPVL--LREEDYATIQYTSGTTGTLKAAIHSQGTWVAIATNILTSLPIE 198
Query: 105 EDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIM 164
+DD+ LH APL H G + + + GA + +P F+ + L VE+ T+L VP ++
Sbjct: 199 QDDIMLHAAPLTHASG-TLVLPHWLRGAANAILPGFQPEEYLATVERLRATTLNLVPTMI 257
Query: 165 ADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLT 224
L + RV + +SVK+I+ G +P E+++ + K I YG TE LT
Sbjct: 258 VMLLSHARVVQY--SLNSVKRIIYGASPMPREVLRRGLELW-GPKFIQYYGQTEAPLILT 314
Query: 225 FMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----G 279
+ D + P + Q + G+P P V L++ + V G
Sbjct: 315 LLEAQDHLGDDP--------------LRQERLFSCGRPVPGVALRIVDEDGQEVPQGTIG 360
Query: 280 RILTRGAHVMLRYWDQ-FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGE 338
I M+ YW L ++ G W+ T D+G ID+ G V+LV R+ I SGG
Sbjct: 361 EITVSTNQAMVGYWKSPELTNATLRNG--WVHTRDMGYIDEQGYVFLVDRKADMIISGGF 418
Query: 339 NVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKEL 398
N+YP EVE VL QHP + V+GI + E V A V + + SE
Sbjct: 419 NIYPREVEEVLYQHPAVQEAAVIGIPDEIWGESVKAFVVCKPDYPSSE------------ 466
Query: 399 LLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
E L C+E+ L +K PR + + + P +TGK+ R +R
Sbjct: 467 ----EELIDFCKER-LASYKKPRT-IEFMETLPKNATGKVVRRVLR 506
>gi|170699476|ref|ZP_02890519.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria
IOP40-10]
gi|170135625|gb|EDT03910.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria
IOP40-10]
Length = 575
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 128/454 (28%), Positives = 202/454 (44%), Gaps = 63/454 (13%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-------SDFVNK-RDMLTADILKGYSLRSLPFTHSWAPE 65
+L+ +PSLR VS+G + +D + + RD L L + A
Sbjct: 163 DLRAVRVPSLRTVVSMGEVAPAGMFRFADVMARGRDTLDVAWLDAIG-------ATLAAT 215
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA- 124
+ I FTSGTTGSPKG ++H ++ + + + E D PL H G+ A
Sbjct: 216 DPINIQFTSGTTGSPKGATLTHRNVVNNARFIAMAMRFSEQDSLCIPVPLYHCFGMVLAV 275
Query: 125 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
+A + GA VF + F+ + L AV T+L VP + +A L ++
Sbjct: 276 LACVSTGAAMVFPGEAFDPVATLAAVADERCTALHGVPTMF--IAELDHPAFAKFDLSTL 333
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + G P E MK + +++ AYGMTETS P +F
Sbjct: 334 RTGIMAGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSF 374
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 298
+ T + + + + VG+ PH+E+K+ V G + T+G VML YWD A
Sbjct: 375 QSSTDDPLEK-RTTTVGRIQPHLEVKIVDPEGRIVPVGATGELCTKGYSVMLGYWDDD-A 432
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
K + W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I
Sbjct: 433 KTREVLVDGWMHTGDLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSA 492
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V G+ +A+ E + A + LR Q SE + +R C + +K
Sbjct: 493 QVFGVPDAKYGEELCAWIVLRADEQMSEDD----------------VRAFC-NGQIAHYK 535
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 536 IPR-YIRFVDELPMTVTGKVQKFVMRERMIEELK 568
>gi|213962564|ref|ZP_03390826.1| acyl-CoA synthetase family member 2 [Capnocytophaga sputigena
Capno]
gi|213954890|gb|EEB66210.1| acyl-CoA synthetase family member 2 [Capnocytophaga sputigena
Capno]
Length = 544
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 189/434 (43%), Gaps = 59/434 (13%)
Query: 22 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 81
+LR V G S F+ +T + L L F + V I +TSGTTG+PK
Sbjct: 146 TLRKEVYWGDSWERFLENGKKVTDEKL-------LSFEEKVQFDDPVNIQYTSGTTGNPK 198
Query: 82 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK-- 139
GV +SH ++ + + Y E D P H G+ V + IP
Sbjct: 199 GVTLSHHNILNNAYFIGIRMNYTEKDRVCIPVPFYHCFGMVIGNLACTVHGATMVIPNDS 258
Query: 140 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 199
F++ LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 259 FDATKTLEAVEKEKCTSLYGVPTMF--ISELYILDKHPYDLSSLRTGVMAGALCPPEIMK 316
Query: 200 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 259
++ YGMTETS P G +H V
Sbjct: 317 RVKEQMNMHEITICYGMTETS---------------PVSTQTKIGAPFEKQIHS-----V 356
Query: 260 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 313
G H+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD
Sbjct: 357 GTIHDHLEIKIINPETKAIVKRGESGELCTRGYSVMLKYWNSPQATQQVIDEQRWMHSGD 416
Query: 314 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 373
+ +D+ G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+
Sbjct: 417 LAMMDEDGYIHISGRIKDLIIRGGENISPKEIEDFLYTYEGVMDAQVIGVPSKKYGEEVM 476
Query: 374 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFP 431
A ++ +E + L+ + L C+ + + +K PR W+ + FP
Sbjct: 477 AWIKTKEG----------------VTLTEQELHDFCKGR-IAHYKVPR---YWKFVEEFP 516
Query: 432 LTSTGKIRRDEVRR 445
+T +GKIR+ E+R
Sbjct: 517 MTISGKIRKVEMRE 530
>gi|375107842|ref|ZP_09754103.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Burkholderiales bacterium JOSHI_001]
gi|374668573|gb|EHR73358.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Burkholderiales bacterium JOSHI_001]
Length = 562
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 201/441 (45%), Gaps = 54/441 (12%)
Query: 18 TAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 77
T +P+L + +G ++ + L A L + SLP A + I FTSGTT
Sbjct: 157 TRLPALASVLRMGDEATAGMRNWHELAA--LGRDARASLPPESELACHDPINIQFTSGTT 214
Query: 78 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF 136
G+PKG ++H ++ ++A + + E D PL H G+ A +A + GA VF
Sbjct: 215 GAPKGATLTHHNIVNNAIAVARCMRFSETDSLCIPVPLYHCFGMVLAVLACVATGAKMVF 274
Query: 137 IPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 195
+ FE ++ L AVE T+L VP + +A L + +++ + G P
Sbjct: 275 PGEGFEPRATLAAVEDEACTALHGVPTMF--IAELDHPEFRLFDLKTLRTGIMAGAPCPV 332
Query: 196 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 255
E+MK ++ AYGMTETS P +F + T + + + +
Sbjct: 333 EVMKRVQRDMHMHEVTIAYGMTETS-------------------PVSFQSATDDPLDK-R 372
Query: 256 GVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 310
VG+ PH+E+KV DG + G + T+G VM YW + G W+
Sbjct: 373 VATVGRVLPHLEVKVVDVDGRTVPVGDKGELCTKGYSVMQGYWGEPERTAEAVRGG-WMH 431
Query: 311 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 370
TGD+ +ID G +VGR + GGENVYP EVE L +HP + + V G+ +AR E
Sbjct: 432 TGDLATIDAQGYCNIVGRVKDMVIRGGENVYPREVEEFLFRHPKVAAVQVFGVPDARYGE 491
Query: 371 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 430
+ A + + +E LR CR++ + +K PR ++ + +
Sbjct: 492 ELCAWIITKPGAACTEDE----------------LRAFCRDQ-IAHYKVPR-YIRFVQEL 533
Query: 431 PLTSTGK----IRRDEVRREV 447
P+T TGK I R+ + RE+
Sbjct: 534 PVTVTGKPQKFIMREAMAREL 554
>gi|29828821|ref|NP_823455.1| long-chain-fatty-acid--CoA ligase [Streptomyces avermitilis
MA-4680]
gi|29605926|dbj|BAC69990.1| putative acyl-CoA synthetase [Streptomyces avermitilis MA-4680]
Length = 534
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 173/399 (43%), Gaps = 61/399 (15%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLA----KIAIVGYGEDDVYLHTAPLCHIG 119
P+ AV+ +TSGTTG PKG V++H + A +A + + DDV L + P I
Sbjct: 169 PDDAVVQIYTSGTTGLPKGAVLAHRSFFTLPQAMRDHDVAWIDWLPDDVALISLPGFGIA 228
Query: 120 GLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
G+ M G V +P+F+ + A+ + H VT+ PA++ +A + G
Sbjct: 229 GIGWFMHTFNAGGTSVIMPQFDPQEAVRLIRTHRVTTTFAAPAMLQMMA-----GERTAG 283
Query: 180 RD---SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
D S++KI G + L+K+ +F + Y TET S +
Sbjct: 284 PDAFVSLRKICYGAAPMSETLLKQCLETF-DCEFAQIYASTETGSVAVCL---------- 332
Query: 237 GQLPQAFGNVTPNSVHQPQGVC---VGKPAPHVELKVCS-DGSS----HVGRILTRGAHV 288
P H P VGKP P E+KV DG+ +G+I R
Sbjct: 333 -----------PPEAHHPGSTVLESVGKPCPGNEVKVVGPDGAELPPGAIGQICVRAPSR 381
Query: 289 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 348
ML YW+ A GE WL GD G +D+ G ++L R N I G+N+YP EVE
Sbjct: 382 MLGYWNLPEATGRTLVGE-WLHMGDAGYLDEDGYIYLCDRMNDTIIVAGQNIYPAEVEKA 440
Query: 349 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 408
L HP + VVG+ + R E V A V LR Q S +ELLLS LR H
Sbjct: 441 LAAHPAVADSAVVGLPDPRWGEAVHAAVVLRPGAQASP---------RELLLS---LRGH 488
Query: 409 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 447
L +K P + + P +GKI R VR +
Sbjct: 489 -----LADYKIPGAY-HFVDTLPRNPSGKILRRAVRERL 521
>gi|383768963|ref|YP_005448026.1| AMP-dependent synthetase and ligase [Bradyrhizobium sp. S23321]
gi|381357084|dbj|BAL73914.1| AMP-dependent synthetase and ligase [Bradyrhizobium sp. S23321]
Length = 518
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 174/384 (45%), Gaps = 46/384 (11%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +T GTTG KGV++SH L+ +L + + YLH AP+ H+ ++ ++L+
Sbjct: 162 IFYTGGTTGRSKGVMLSHRNLMANALNALGEGLFPASTTYLHAAPMFHLANGAAMYSLLL 221
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G +V + F + + A++ VT ++ VP ++ + S+K I+ G
Sbjct: 222 SGGSNVIVQGFTPEGVMAAMQNERVTDVLLVPTMIQMFVDHPAIGNY--DLSSLKHIIYG 279
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
+ ++ A + P + AYGMTE S T + + G
Sbjct: 280 ASPISEAVLDRAARALPHVRFTQAYGMTELSPIATLL-----------HADEHVGEGRRK 328
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
H+ G+ E+++ + + VG I+ RG VM+ YW+ +P +
Sbjct: 329 GRHR----GAGRATLGCEVRIVDENDRPLPAGSVGEIVVRGDTVMMGYWE----RPEETA 380
Query: 305 GEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
V W+ TGD G +D+ G +++V R I SGGENVY EVE L QHP ++ V+
Sbjct: 381 RAVIDGWMHTGDGGYMDEDGFIYVVDRVKDMIISGGENVYSIEVENALAQHPSVLQCAVI 440
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ N + E V A V R + S + EL+ ++ L + G+K PR
Sbjct: 441 GVPNEQWGEQVHAVVVKRSGVEVS---------SGELIEFTKTL--------IAGYKCPR 483
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRR 445
+ P PL+ GK+ + E+RR
Sbjct: 484 SIEITETPLPLSGAGKVLKRELRR 507
>gi|336311874|ref|ZP_08566832.1| long-chain-fatty-acid--CoA ligase [Shewanella sp. HN-41]
gi|335864620|gb|EGM69703.1| long-chain-fatty-acid--CoA ligase [Shewanella sp. HN-41]
Length = 575
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 193/445 (43%), Gaps = 47/445 (10%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
+LQ A+P L + + +G+ S + D L D+ +P A+ I FT
Sbjct: 165 KLQAKAVPDLEFVIRMGAEKSVGMLNFDDLLVDVTADDKATLERIGKELSPLDAINIQFT 224
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGA 132
SGTTGSPKG +SH ++ + + D PL H G+ + L GA
Sbjct: 225 SGTTGSPKGATLSHHNILNNGYLVAEAMKFTCHDKLCIPVPLYHCFGMVLGNLVCLAKGA 284
Query: 133 CHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
VF + F+ L+ VE T+L VP + +A L + T S++ + G
Sbjct: 285 AAVFPGESFDPLITLQVVENERCTALHGVPTMF--IAELEHPEFTRFDLRSLRTGVMAGA 342
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
P E+M+ N +++ YG TE S L +T D +E
Sbjct: 343 TCPEEVMRRVQNLMYMQEVLIGYGQTE-CSPLNHITEIDSPVEK---------------- 385
Query: 252 HQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 306
+ + VG+ PH E+K+ + + G + +RG +M YW+ + E
Sbjct: 386 ---RVLTVGRALPHTEVKIVDEFGEVLPINQPGEVCSRGYCIMQCYWNDPDKTAATIDSE 442
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
WL +GDIG +D+ G V +VGR I GGEN+YP E+E L H + V G+ +
Sbjct: 443 GWLHSGDIGQMDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVQSD 502
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ E V A +++R SE++ +R EK FK PR ++ +
Sbjct: 503 KYGEEVCAWIKVRSGATISEAD----------------IRHFLTEK-FAYFKVPR-YIKF 544
Query: 427 RKPFPLTSTGKIRRDEVRREVMSHL 451
+P+T TGKI++ ++R + L
Sbjct: 545 VDQYPMTVTGKIQKFKMRELMYQEL 569
>gi|323702368|ref|ZP_08114033.1| AMP-dependent synthetase and ligase [Desulfotomaculum nigrificans
DSM 574]
gi|323532674|gb|EGB22548.1| AMP-dependent synthetase and ligase [Desulfotomaculum nigrificans
DSM 574]
Length = 554
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 200/457 (43%), Gaps = 55/457 (12%)
Query: 6 ESSDSWYLELQHTAIPSLRWHVSLGSSS-SDFVNKRDMLT-ADILKGYSLRSLPFTHSWA 63
E DS +L +P L+ + +G + + N RD+L A+ + L + S
Sbjct: 131 ELRDSQPGKLNSARLPMLKNVIFIGEDTPAGMWNWRDILAMANQVTDEELDAR--QASLD 188
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLS 122
P+ + + +TSGTTG PKGV+++H +I + + + + E D P H G +
Sbjct: 189 PDDCINMQYTSGTTGFPKGVMLTHFNIINNAHSIADCMNFTEQDKLCIPVPFFHCFGCVL 248
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
M ++ GA V + F LE +EQ T++ VP + + L + K S
Sbjct: 249 GTMTCVVSGATMVPVEVFHPVRVLETIEQERCTAVHGVPTMF--IMELEELDKKKYDTSS 306
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + G P E+MK N ++ YG TE S ++T DP
Sbjct: 307 LRTGIMAGSPCPIEVMKAVVNRMGAREITITYGQTEASPAITMTRTDDPI---------- 356
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYWD 294
+ VG+ P+VE K+ C G G I RG +VM Y+
Sbjct: 357 ----------DLRVTTVGRTIPNVEAKILDPETGAECPPGVQ--GEICARGYNVMKGYYK 404
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
A WL TGD+G +D G + GR I GGEN+YP E+E L HP
Sbjct: 405 MPEATAQAIDANGWLHTGDLGVMDHNGYFKITGRLKDMIIRGGENIYPREIEEFLYTHPL 464
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ + VVG+ +A+ E V+A ++ +E L+ E ++ +C+ K +
Sbjct: 465 VKDVQVVGVPSAKYGEEVLAFIQPKEGAN----------------LTKEEIQAYCQNK-I 507
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+K P +VL+ +P T++GK+++ +R + + L
Sbjct: 508 AKYKIPS-YVLFTDSYPTTASGKVQKYRLREKAIREL 543
>gi|54027564|ref|YP_121806.1| long-chain-fatty-acid--CoA ligase [Nocardia farcinica IFM 10152]
gi|54019072|dbj|BAD60442.1| putative acyl-CoA synthetase [Nocardia farcinica IFM 10152]
Length = 523
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 179/389 (46%), Gaps = 51/389 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
+I +TSGTTGSPKG V++H+ + Q+L I + + V T+PL HI GL S
Sbjct: 178 LIMYTSGTTGSPKGAVLTHANMNAQALTCIRAMEITPESVGFCTSPLFHIAGLGSLAPYF 237
Query: 129 MVGACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 186
M+GA V P F L+AVE T+ VPA I + T K R K+
Sbjct: 238 MLGAKTVLHPLGAFNPTEFLDAVEAEQATTAFCVPAQW----QAICAEPTVKQRKLALKM 293
Query: 187 LNGGGGLPSE-LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
L+ G S+ +++ FP+A+ ++ +G TE S + D L G
Sbjct: 294 LSWGAAPASDSVLRAMAECFPEAQNVAVFGQTEMSPITCVLEGKD-ALRKLGS------- 345
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKP 300
VGKP P +++++ D VG I+ RG +M YW++ A
Sbjct: 346 -------------VGKPIPTIQVRIVDDEMNDVAPGEVGEIVYRGPTLMQGYWNKPEATA 392
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
G W +GD+ D+ G VW+V R+ I SGGEN+Y EVE VL HP I V
Sbjct: 393 DAFEGG-WFHSGDLVRTDEEGFVWVVDRKKDMIISGGENIYCAEVENVLFSHPKIREAAV 451
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G ++ + E+ VA V L +N D EL + +NL +K P
Sbjct: 452 IGRSHDKWGEVPVAIVAL--------NNPDDELTLDEL--------EPFLNENLARYKHP 495
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREVMS 449
+ V+ + P ++GK+ + ++R++ S
Sbjct: 496 KDLVVVAE-LPRNASGKVVKVQLRKDYSS 523
>gi|383320319|ref|YP_005381160.1| acyl-CoA synthetase/AMP-acid ligase [Methanocella conradii HZ254]
gi|379321689|gb|AFD00642.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[Methanocella conradii HZ254]
Length = 583
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 179/389 (46%), Gaps = 48/389 (12%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-S 123
+ + I +TSGTTG PKGV+++H ++ + + E D P H G+ S
Sbjct: 218 DDTINIQYTSGTTGFPKGVMLTHHNILNNGYFIGECMSFTEKDRLCIPVPFYHCFGMVLS 277
Query: 124 AMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
MA + GA V + F+ S L AVE+ T+L VP + +A L S
Sbjct: 278 NMACVTHGATMVLPAEYFDPVSTLSAVEKERCTALHGVPTMF--IAELEHPDFKKFDLSS 335
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + G P E MK+ + ++ YG TE S LT + DP
Sbjct: 336 LRTGIMAGSPCPIEYMKKVSTLMNMRDVVITYGQTEASPGLTMSSTADPL---------- 385
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQF 296
+ + VGKP PH E+K+ + + G I RG +M Y++
Sbjct: 386 ----------ERRVSTVGKPMPHAEIKIVDPKTGKMVPRGQPGEICARGYMIMKGYYNNP 435
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
A + WL TGD+G +DD G + GR + GGEN+YP EVE L +HP I
Sbjct: 436 EATSLAIDKDGWLHTGDLGILDDEGYCKITGRLKDMVIRGGENIYPREVEEFLYEHPSIS 495
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ V+G+ + + E ++A ++L+ + C+ ++ E +++ CR K +
Sbjct: 496 DVQVIGVPDLKYGEELMAWIKLK-------NGCN---------VTPEEIKEFCRGK-IAH 538
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
+K PR ++ + FP+T TGKI++ ++R
Sbjct: 539 YKIPR-YIKFVDEFPMTVTGKIQKYKMRE 566
>gi|402564913|ref|YP_006614258.1| AMP-binding domain-containing [Burkholderia cepacia GG4]
gi|402246110|gb|AFQ46564.1| AMP-binding domain-containing [Burkholderia cepacia GG4]
Length = 575
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 203/449 (45%), Gaps = 53/449 (11%)
Query: 14 ELQHTAIPSLRWHVSLGS-SSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVII 70
+L +PSLR VS+G + + D++ D L L ++ T A + I
Sbjct: 163 DLHAARVPSLRTVVSMGEVAPAGMFRFADVMARGRDTLDVARLDAIGAT--LAATDPINI 220
Query: 71 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLM 129
FTSGTTGSPKG ++H ++ + + + + E D PL H G+ A +A +
Sbjct: 221 QFTSGTTGSPKGATLTHRNVVNNARSIAMAMRFTEQDSLCIPVPLYHCFGMVLAVLACVS 280
Query: 130 VGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
G VF + F+ + L AV T+L VP + +A L +++ +
Sbjct: 281 KGTAMVFPGEAFDPVATLAAVADERCTALHGVPTMF--IAELDHPAFATFDLATLRTGIM 338
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G P E MK + +++ AYGMTETS P +F + T
Sbjct: 339 AGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSFQSSTD 379
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
+ + + + VG+ PH+E+K+ V G + T+G VML YWD AK
Sbjct: 380 DPLEK-RTTTVGRIQPHLEVKIVDPNGDVVQVGATGELCTKGYSVMLGYWDDD-AKTREV 437
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I V G+
Sbjct: 438 LVDGWMHTGDLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGV 497
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+A+ E + A + LR Q SE + +R C + + +K PR +
Sbjct: 498 PDAKYGEELCAWIVLRADEQMSEDD----------------VRAFCNGQ-IAHYKIPR-Y 539
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
V + P+T TGK+++ +R ++ LK
Sbjct: 540 VRFVDELPMTVTGKVQKFVMRERMIEELK 568
>gi|429335406|ref|ZP_19216036.1| AMP-binding domain protein [Pseudomonas putida CSV86]
gi|428759890|gb|EKX82174.1| AMP-binding domain protein [Pseudomonas putida CSV86]
Length = 557
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 174/394 (44%), Gaps = 47/394 (11%)
Query: 67 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA 126
AV I +TSGTTG PKG +SH ++ +G E D + PL H G+
Sbjct: 203 AVNIQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLTEHDRMVIPVPLYHCFGMVMGNL 262
Query: 127 MLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
M + P F+ L+AV + T+L VP + +A L + ++ ++
Sbjct: 263 GCMTHGSTMIYPNDAFDPALTLQAVAEERATALYGVPTMF--IAVLDQPQRADHDLSCLR 320
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E+M+ N +++ AYGMTETS ++ T D LE
Sbjct: 321 TGIMAGAICPIEVMRRVINELHMSEVQIAYGMTETSP-VSLQTGPDDELEL--------- 370
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKV-----CSDGSSHVGRILTRGAHVMLRYWDQFLAK 299
VT VG+ P +E K+ C +G + TRG VML YW A
Sbjct: 371 RVT----------TVGRTQPQLESKIIDEHGCVVPRGQIGELCTRGYSVMLGYWGNPAAT 420
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
W+ TGD+ S+D+ G V + GR I GGEN+YP E+E HP + +
Sbjct: 421 AEAIDPAGWMHTGDLASMDEQGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQ 480
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+GI + R E +VA W + + S+ + E L+ C+ + + FK
Sbjct: 481 VIGIPDERYGEEIVA---------WIKFHPGHSATDVE-------LQAWCKNR-IAHFKT 523
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
PR F + FP+T TGK+++ +R + L+
Sbjct: 524 PRHFRFVEE-FPMTVTGKVQKFRMREISIEELRQ 556
>gi|443304175|ref|ZP_21033963.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. H4Y]
gi|442765739|gb|ELR83733.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. H4Y]
Length = 479
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 171/389 (43%), Gaps = 51/389 (13%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 116
PF + I FTSGTTG PKG +++H + + E D YL P
Sbjct: 141 PFERPVSGTDTSDIIFTSGTTGRPKGAMLNHGQTLRMYEEWATLADLREGDRYLQINPYF 200
Query: 117 HIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK 175
H GL + + + GA + + F+ + +E +++ +T L P + L + K
Sbjct: 201 HTFGLKAGLVTSFLRGATMLPVAVFDIDTVVELIDRERITMLPGPPTLYHSLLGVGDKSK 260
Query: 176 TWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
+++ + G +P EL++ P L++ YG+TE + TL
Sbjct: 261 L----STLRAAVTGAADIPVELVRRIHGELPFETLMTGYGLTEAGNV---------TLSR 307
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQ 295
PG +F +V + G P VE+++ DG ++ RG VM Y D
Sbjct: 308 PGD---SFEDVATTA---------GLPCDGVEVRIADDGE-----VVVRGYGVMQGYLDD 350
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
A E WL TGD+GS DD G + +VGR+ GG N YP E+E LL HP +
Sbjct: 351 PAATAQAIDAEGWLHTGDLGSFDDAGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLNHPAV 410
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
V+GI + R+ ++ A V + +S++ L CR++ +
Sbjct: 411 AQAAVIGIPDERMGQVGKAFVVRKGE------------------VSADELIAWCRDR-MA 451
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
GFK PR V + PL +TGK+ +D++R
Sbjct: 452 GFKVPRA-VQFLDSLPLNATGKVMKDQLR 479
>gi|373949980|ref|ZP_09609941.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS183]
gi|386324187|ref|YP_006020304.1| long-chain-fatty-acid--CoA ligase [Shewanella baltica BA175]
gi|333818332|gb|AEG10998.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica BA175]
gi|373886580|gb|EHQ15472.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS183]
Length = 570
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 195/446 (43%), Gaps = 49/446 (10%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
+LQ A+P L + + +G+ S + D L D+ + +P ++ I FT
Sbjct: 160 QLQAKAVPDLEFVIRMGAEKSVGMFNFDDLLVDVTADDKAALESIGKALSPYDSINIQFT 219
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGA 132
SGTTGSPKG +SH ++ + + D PL H G+ ++ L GA
Sbjct: 220 SGTTGSPKGATLSHHNILNNGYLVAEAMKFTCHDKLCIPVPLYHCFGMVLGSLVCLSKGA 279
Query: 133 CHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 191
VF + F+ + L+ +EQ T+L VP + +A L + T S++ + G
Sbjct: 280 AAVFPGESFDPLTTLQVIEQERCTALHGVPTMF--IAELEHPEFTRFDLSSLRTGVMAGA 337
Query: 192 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP-NS 250
P E+M+ N +++ YG TE S ++T NS
Sbjct: 338 TCPEEVMRRVQNLMYMKEVLIGYGQTECSP---------------------LNHITEINS 376
Query: 251 VHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTG 305
+ + + VG+ PH E+K+ + + G + +RG +M YW+ +
Sbjct: 377 PVEKRVLTVGRALPHTEVKIVDEFGEVLPINQPGEVCSRGYCIMQCYWNDPEKTAATIDS 436
Query: 306 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 365
WL +GDIG +D+ G V +VGR I GGEN+YP E+E L H + V G+ +
Sbjct: 437 AGWLHSGDIGQMDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVQS 496
Query: 366 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 425
+ E V A +++R +E + +R EK FK PR ++
Sbjct: 497 DKYGEEVCAWIKVRSGATITEED----------------IRHFLTEK-FAYFKVPR-YIK 538
Query: 426 WRKPFPLTSTGKIRRDEVRREVMSHL 451
+ +P+T TGKI++ ++R + L
Sbjct: 539 FVDQYPMTVTGKIQKFKMRELMYQEL 564
>gi|42783699|ref|NP_980946.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus ATCC 10987]
gi|42739628|gb|AAS43554.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus ATCC 10987]
Length = 561
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 185/388 (47%), Gaps = 51/388 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGE-DDVYLHTAPLCHIGGLSSAMA 126
++ +T GTTG PKGV+++H L+ +L + + E ++V L P H+ G+++ M
Sbjct: 208 LLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFFHVYGMTAVMN 267
Query: 127 M-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ +M G V IPKF+ K EA+++H VT P I L +K+ S++
Sbjct: 268 LSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRA 325
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
++G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 326 CISGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGV 378
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 305
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 379 PWPDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAA 424
Query: 306 ---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G
Sbjct: 425 VLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIG 484
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + E V A V L+E + SE +Q ++ K L +K P++
Sbjct: 485 VPDPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKV 527
Query: 423 FVLWRKPFPLTSTGKIRR----DEVRRE 446
+ +R P T+ GKI R DE +R+
Sbjct: 528 YE-FRDELPKTTVGKILRRVLIDEEKRK 554
>gi|403525992|ref|YP_006660879.1| 2-succinylbenzoate--CoA ligase MenE [Arthrobacter sp. Rue61a]
gi|403228419|gb|AFR27841.1| 2-succinylbenzoate--CoA ligase MenE [Arthrobacter sp. Rue61a]
Length = 516
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 184/395 (46%), Gaps = 47/395 (11%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 116
P S + A +I +TSGTTG PKG +++H + + + + +DV L +PL
Sbjct: 161 PLDESVTLDDAAMILYTSGTTGKPKGALLTHGNITWNCINTVVDMDLSRNDVALMISPLF 220
Query: 117 HIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK 175
H+ L + ML+ GA V KF++ AL+ V QH VT+L VP L
Sbjct: 221 HVASLDMGLLPMLLKGATVVLESKFDAGRALQLVAQHKVTTLNGVPTTFQMLCD----HP 276
Query: 176 TWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 233
W D S++K+ GG +P +++ S YGMTET+ T + + +
Sbjct: 277 GWSTADLTSLEKLTCGGSAVPGRVLEAYEQR--GIGFTSCYGMTETAPGTTMLPV-SRSK 333
Query: 234 ETPGQ--LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLR 291
E G LP F +V + P G + + G VG I G +V+
Sbjct: 334 EKAGSAGLPHFFTDV---RIADPLG------------GIAALG--EVGEIQISGPNVIKE 376
Query: 292 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
YW++ A + W +GD+G D G +++ R I SGGEN+YP EVEA + +
Sbjct: 377 YWNRPEATAESYSDSSWFRSGDMGYQDGDGFLFVSDRIKDMIISGGENIYPAEVEAAIAE 436
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 411
P + + V+G+ + + E+ A V LRE+ +E E LR H E
Sbjct: 437 LPAVGSVAVIGVDDQKWGEVPRAIVTLRENASLTE----------------EQLRSHL-E 479
Query: 412 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
L +K P+ V++ + P T++GKIR+ ++R++
Sbjct: 480 GRLARYKIPK-SVVFVEEMPRTASGKIRKMDLRKQ 513
>gi|126437383|ref|YP_001073074.1| AMP-binding domain-containing protein [Mycobacterium sp. JLS]
gi|126237183|gb|ABO00584.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
Length = 540
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 172/392 (43%), Gaps = 47/392 (11%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MA 126
V I +TSGTTG PKG +SH ++ ++G G D P H G+ +
Sbjct: 183 VNIQYTSGTTGFPKGATLSHRNIVNNGFFVTELIGLGPTDRLCIPVPFYHCFGMVMGNLG 242
Query: 127 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
GA V P F++ L A+E+ T + VP + +A L S++
Sbjct: 243 CTTHGATMVIPAPGFDAGLTLAAIEKERCTGVYGVPTMF--IAMLGHPDFPGTDLSSLRT 300
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+MK N ++ AYGMTETS ++ TL D L+
Sbjct: 301 GIMAGSVCPVEVMKRCINEMHMTEVAIAYGMTETSP-VSCQTLIDDDLDR---------- 349
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAK 299
+ +G+ PHVE+K+ + G TRG VML YW+
Sbjct: 350 ---------RTATIGRAHPHVEVKIVDPDTGETVERGEPGEFCTRGYSVMLGYWNDPDKT 400
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
+ W+ TGD+ + D G +VGR + GGEN+YP EVE L HP I
Sbjct: 401 AQAIDADGWMHTGDLAVMRDDGYCNVVGRIKDMVIRGGENIYPREVEEFLHTHPDIDDAQ 460
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V+G+ + + E + A +R+R L++E +R+ R+K L +K
Sbjct: 461 VIGVPDDKYGEEICAWIRMRPG---------------RPPLTAEAVREFARDK-LAHYKI 504
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
PR +V FP+T TGK+R+ ++R E + L
Sbjct: 505 PR-YVHVVDEFPMTVTGKVRKVDMRAETVRLL 535
>gi|398857242|ref|ZP_10612943.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM79]
gi|398241091|gb|EJN26750.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM79]
Length = 568
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 195/449 (43%), Gaps = 51/449 (11%)
Query: 14 ELQHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIIC 71
+LQ +P LR +SL + S F+ ++ D+ S+ L S + AV I
Sbjct: 156 QLQSERLPELRGVISLDAQPPSGFLPWSQLI--DLAASVSVEQLRERQDSLHFDQAVNIQ 213
Query: 72 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVG 131
+TSGTTG PKG +SH ++ +G +D + PL H G+ +
Sbjct: 214 YTSGTTGFPKGATLSHYNILNNGYMVGESLGLTANDRLVIPVPLYHCFGMVMGNLGCVTH 273
Query: 132 ACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
+ P F+ L V + T+L VP + +A L + K+ S++ +
Sbjct: 274 GSTMIYPNDAFDPLLTLSTVAEEKATALYGVPTMF--IAMLDQPKRAEFDLSSLRTGIMA 331
Query: 190 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 249
G P E+M+ N +++ AYGMTETS +L+T P+
Sbjct: 332 GATCPIEVMRRVINEMHMSEVQIAYGMTETSPV---------SLQT-----------GPS 371
Query: 250 SVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVST 304
+ + VG+ P +E K+ + + V G + TRG VML YW+
Sbjct: 372 DELELRVTTVGRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAID 431
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
W+ TGD+ S++D G V + GR I GGEN+YP E+E HP + + V+GI
Sbjct: 432 EAGWMHTGDLASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIP 491
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 424
+R E +VA ++ +E L+ C+E+ + FK PR F
Sbjct: 492 CSRYGEEIVAWIKFHPGHNATEQE----------------LQAWCKER-IAHFKTPRYFK 534
Query: 425 LWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
+ FP+T TGKI++ +R + L S
Sbjct: 535 FVEE-FPMTVTGKIQKFRMREISIEELAS 562
>gi|444309582|ref|ZP_21145217.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium M86]
gi|443487034|gb|ELT49801.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium M86]
Length = 504
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 202/443 (45%), Gaps = 53/443 (11%)
Query: 20 IPSLRWHVSLGSSS-SDFVNKRDML-TADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 77
+PSLR + LG+ +N D+ + D + L L + + + I FTSGTT
Sbjct: 98 LPSLRCVIRLGAEQMPGMLNFDDVAQSGDEVTRQELAQLADELQF--DDPINIQFTSGTT 155
Query: 78 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVF 136
GSPKG +SH ++ + E D P H G+ +A + G+C V
Sbjct: 156 GSPKGATLSHHNILNNGFFVGDAMQLSEQDRLCIPVPFYHCFGMVLGNLACVTHGSCMV- 214
Query: 137 IPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 194
IP F+ L+ VE+ T L VP + +A L + S++ + G P
Sbjct: 215 IPNDSFDPFLTLQTVEEEQCTGLHGVPTMF--IAMLDHPDSSRFDLSSLRTGIMAGSPCP 272
Query: 195 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 254
E+M+ + + ++ A G TETS P +F + T + + +
Sbjct: 273 IEVMRRVVSEMHQGEITIACGKTETS-------------------PVSFQSSTADPLER- 312
Query: 255 QGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 309
+ VG+ PH+E+K+ +DG G +LTRG VM YW+ + W+
Sbjct: 313 RVSTVGRIHPHLEVKIVDADGKVVPRGEKGELLTRGYSVMRGYWNDAESSAGAIDDAGWM 372
Query: 310 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 369
TGD+ +ID+ G +VGR I GGEN+YP E+E L HP I + + GI + +
Sbjct: 373 HTGDLATIDEEGYCNIVGRIKDLIIRGGENIYPREIEEFLFAHPAISDVQIFGIPDRKFG 432
Query: 370 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 429
E++ A V+L + Q SE E L ++CR++ + +K P + +
Sbjct: 433 EIICAWVKLHKDAQLSE----------------EDLSEYCRQR-IAHYKVP-AHIRFVDQ 474
Query: 430 FPLTSTGKIRRDEVRREVMSHLK 452
FP+T TGKI++ +R+ ++ L+
Sbjct: 475 FPMTVTGKIQKFVMRQAMIEELE 497
>gi|403070303|ref|ZP_10911635.1| long-chain fatty acid CoA ligase (AMP-binding) protein
[Oceanobacillus sp. Ndiop]
Length = 565
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 181/400 (45%), Gaps = 56/400 (14%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALI--VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
E ++ +T GTTG PKGV+++H L VQ V L P H+ G++
Sbjct: 207 EDLALLQYTGGTTGHPKGVMLTHFNLTANVQMCESWLYKTNDRQGVVLGLLPFFHVYGMT 266
Query: 123 SAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+ M + G+ + +PKF + L+A+E+ T P I L +KK
Sbjct: 267 TVMNFSIKQGSKMILMPKFNTLDVLKAIEKQKPTLFPGAPTIYVGLLNHPDIKKY--DLS 324
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++ L+G LP E+ +E KL+ YG+TE+S P
Sbjct: 325 SIEACLSGSAPLPLEV-QEQFEEITGGKLVEGYGLTESS-------------------PV 364
Query: 242 AFGN-VTPNSVHQPQGVCVGKPAPHVELKVC---SDGSS----HVGRILTRGAHVMLRYW 293
N V N V+ +G P P + K+ SDG+ VG I +G +M YW
Sbjct: 365 THANFVWENRVNG----SIGVPWPDTDCKIFKMDSDGTEAEVGEVGEIAVKGPQIMQGYW 420
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
+ +V + WL TGD+G +D+ G ++V R+ I +GG N+YP EVE VL +H
Sbjct: 421 NNKEETENV-LKDGWLFTGDLGYMDEEGYFFVVDRKKDMIIAGGYNIYPREVEEVLYEHE 479
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
+ VV GI + E V A + L+E + ++S EVL +CR+
Sbjct: 480 AVQEAVVAGIPDPYRGETVKAFIVLKEGF----------------MISEEVLNDYCRQA- 522
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 453
L +K PR++ +R P T+ GKI R ++ E L++
Sbjct: 523 LAAYKVPRIYE-FRDELPKTAVGKILRRKLVDEETKKLEA 561
>gi|91974734|ref|YP_567393.1| AMP-binding domain-containing protein [Rhodopseudomonas palustris
BisB5]
gi|91681190|gb|ABE37492.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB5]
Length = 564
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 182/394 (46%), Gaps = 47/394 (11%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
+ AV I FTSGTTGSPKGV ++H ++ + E D PL H G+
Sbjct: 203 DDAVNIQFTSGTTGSPKGVTLTHHNILNNGYFVGRAMKLTEQDRICIPVPLYHCFGMVMG 262
Query: 125 -MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
+A + GA V+ + F+ + L+ + T+L VP + +A L + S
Sbjct: 263 NLAAVTSGATMVYPGEGFDPLATLQTASREKCTALYGVPTMF--IAELDHPEFASFDLSS 320
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
++ + G P E+M+ + ++ AYGMTETS P +
Sbjct: 321 LRTGIMAGAPCPVEVMRRVNDQMNMREVTIAYGMTETS-------------------PVS 361
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFL 297
F + + Q + VG+ PHVE+KV +G G + TRG +ML YWD+
Sbjct: 362 FQSAVDDP-EQRRVSTVGRIHPHVEVKVVDLEGRIVPRGQRGELCTRGYSIMLGYWDEAE 420
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
V W+ TGD+ IDD G +VGR + GGEN+YP E+E L +HP I
Sbjct: 421 KTADVLDRTGWMHTGDLAVIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQD 480
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ + G+A+ R E + A VR+R + L+++ +R C + +
Sbjct: 481 VQIFGVADNRYGEELCAWVRVRSGEK----------------LTADDIRAFC-QGQIAHN 523
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
K PR ++ + FP+T TGKI++ +R +V S L
Sbjct: 524 KIPR-YIEFVDEFPMTVTGKIQKFVMREKVESKL 556
>gi|433655259|ref|YP_007298967.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433293448|gb|AGB19270.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 563
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 181/393 (46%), Gaps = 35/393 (8%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIG 119
+S P+ + I +TSGTT PKG +++H L+ + + E+D T PL H
Sbjct: 202 NSLKPDEVIDIQYTSGTTDFPKGAMLTHYGLLNNGDTIATRMKFTENDKLCITVPLFHCF 261
Query: 120 GLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
G + S MA L GA V + F +EA+++ T+ VP + + K
Sbjct: 262 GYTLSVMACLSKGATMVLVDHFNPVKVMEAIDKEKCTAFNGVPTMFITMLNHQDFDKF-- 319
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
+++ + G P ++M+ + ++ S YG+TE S +T T D +LE
Sbjct: 320 DFSTLRTGIMAGSVCPKKVMEAVVDKMNMREITSVYGLTEASPGIT-QTSVDDSLE---D 375
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA 298
G V P GV + P LK GS G I+ RG +VM Y+
Sbjct: 376 RVSTVGYVFP-------GVDIKIVDPKT-LKEVPIGSE--GEIMARGYNVMKGYYKMKEE 425
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
+ WL TGDIG +DD G + + GR I GGEN+ P E+E L HPG+ +
Sbjct: 426 TEKAIEKDGWLHTGDIGKLDDRGYLKITGRLKDMIIRGGENISPTEIEECLYHHPGVKDV 485
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
+VG+ + + E ++A + +E + C + +E +R++ R+K L FK
Sbjct: 486 QIVGVPDEKYGEEIMAYIIPKEGY------C----------IEAEDIREYARKK-LARFK 528
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
P+ +V FP T++GKI++ +R M+ L
Sbjct: 529 VPK-YVKIIDEFPKTASGKIQKYRLREMAMAEL 560
>gi|407707040|ref|YP_006830625.1| acetate-CoA ligase [Bacillus thuringiensis MC28]
gi|407384725|gb|AFU15226.1| Long-chain-fatty-acid--CoA ligase [Bacillus thuringiensis MC28]
Length = 577
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 184/389 (47%), Gaps = 53/389 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAK---IAIVGYGEDDVYLHTAPLCHIGGLSSAM 125
++ +T GTTG PKGV+++H L+ +L + GE+ V L P H+ G+++ M
Sbjct: 224 LLQYTGGTTGFPKGVMLTHKNLVSNTLMGAHWLYNCKEGEE-VILGVLPFFHVYGMTAVM 282
Query: 126 AM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ +M G V IPKF+ K EA+++H VT P I L +K+ S++
Sbjct: 283 NLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQ 340
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
++G LP E+ +E S KL+ YG+TE+S L++ ++P + G
Sbjct: 341 ACISGSAPLPVEV-QEEFESVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIG 393
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 394 VPWPDTESIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETA 439
Query: 305 G---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +
Sbjct: 440 AVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTI 499
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + E V A V L+E + SE DQ ++ K L +K P+
Sbjct: 500 GVPDPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPK 542
Query: 422 LFVLWRKPFPLTSTGKIRR----DEVRRE 446
++ +R P T+ GKI R DE +R+
Sbjct: 543 VYE-FRDELPKTTVGKILRRVLIDEEKRK 570
>gi|402555350|ref|YP_006596621.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus FRI-35]
gi|401796560|gb|AFQ10419.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus FRI-35]
Length = 561
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 185/388 (47%), Gaps = 51/388 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGE-DDVYLHTAPLCHIGGLSSAMA 126
++ +T GTTG PKGV+++H L+ +L + + E ++V L P H+ G+++ M
Sbjct: 208 LLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFFHVYGMTAVMN 267
Query: 127 M-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ +M G V IPKF+ K EA+++H VT P I L +K+ S++
Sbjct: 268 LSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRA 325
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
++G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 326 CISGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGV 378
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 305
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 379 PWPDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAA 424
Query: 306 ---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G
Sbjct: 425 VLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIG 484
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + E V A V L+E + SE +Q ++ K L +K P++
Sbjct: 485 VPDPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKV 527
Query: 423 FVLWRKPFPLTSTGKIRR----DEVRRE 446
+ +R P T+ GKI R DE +R+
Sbjct: 528 YE-FRDELPKTTVGKILRRVLIDEEKRK 554
>gi|408673536|ref|YP_006873284.1| AMP-dependent synthetase and ligase [Emticicia oligotrophica DSM
17448]
gi|387855160|gb|AFK03257.1| AMP-dependent synthetase and ligase [Emticicia oligotrophica DSM
17448]
Length = 511
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 185/390 (47%), Gaps = 52/390 (13%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
+P+ +I +TSGTTG PKG ++HS L + + + +DV + PL HI G
Sbjct: 167 SPDDTAVIIYTSGTTGRPKGAELTHSNLFLNANLSKDLQKLNYEDVSMLVLPLFHIFGQV 226
Query: 123 SAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
M A + GA V +P+F+++ L +++ VT VP + L + K
Sbjct: 227 VCMIASIYRGATAVLVPRFDAEMVLSLIQKEKVTHFAGVPTMYWGLLSFPGADKF--DTS 284
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S+ L+GG LP +++K+ + ++ YGM+E S +TF
Sbjct: 285 SLSMCLSGGAALPVQVLKDFEAKY-NVPILEGYGMSEGSPVVTFNH-------------- 329
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQF 296
P+ V +P VG P VE+ + + G++ G + RG +VM Y+ +
Sbjct: 330 ------PDRVRKPG--SVGTPVWGVEVCIKDENGKELGNNEKGELCYRGHNVMKGYYKRP 381
Query: 297 LAKP-SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
A S+ G WL +GDI DD G ++V R I GG NVYP EVE V++QH I
Sbjct: 382 DATAESIKNG--WLHSGDIAIRDDDGYYFIVDRTKDMIIRGGYNVYPREVEEVMMQHSAI 439
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ V+G+ + E + ACV L+ Q +E +EL++ + ++ +
Sbjct: 440 SMVAVIGVPSDEYGEEIKACVVLKPDDQITE---------QELIVWT--------KERIA 482
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
+K PR+ V + P+ ++GKI + E+R+
Sbjct: 483 SYKYPRV-VEFMSSLPMGASGKILKRELRK 511
>gi|350267260|ref|YP_004878567.1| 2-succinylbenzoate--CoA ligase [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349600147|gb|AEP87935.1| 2-succinylbenzoate--CoA ligase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 486
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 185/381 (48%), Gaps = 57/381 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +TSGTTG PKGV + +++ +G E D +L PL HI GLS+ ++
Sbjct: 149 LMYTSGTTGKPKGVQQTFGNHYFSAVSSALNLGITEQDRWLIALPLFHISGLSALFKSVI 208
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G V +F L+++ +H VT + V ++A L +++T + +S++ IL G
Sbjct: 209 YGMTVVLHQRFSVSDVLDSISRHQVTMISAVQTMLASL-----LEETSRCPESIRCILLG 263
Query: 190 GGGLPSELMKEATNS-FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
GG P L++E FP + +YGMTET S + ++P
Sbjct: 264 GGPAPLPLLEECREKGFP---VFQSYGMTETCSQIV--------------------TLSP 300
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVST 304
+ G GKP E+K+ DG + G IL +G +VM Y+++ A S S
Sbjct: 301 EFSMEKLG-SAGKPLFSCEIKIERDGQACEPFEHGEILVKGPNVMKSYFNRESANES-SF 358
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
WL TGD+G +D G ++++ RR+ I SGGEN+YP EVE+VLL HP + V G
Sbjct: 359 QNGWLKTGDLGYLDSEGFLYVLDRRSDLIISGGENIYPAEVESVLLSHPAVAEAGVSGAE 418
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLF 423
+ + ++ A + L + +S+E L +C+E+ L +K P + F
Sbjct: 419 DKKWGKVPHAYLVLHKP------------------VSAEELTAYCKER-LAKYKIPAKFF 459
Query: 424 VLWRKPFPLTSTGKIRRDEVR 444
VL P ++ K+ R++++
Sbjct: 460 VL--DSLPRNASNKLMRNQLK 478
>gi|384135554|ref|YP_005518268.1| AMP-dependent synthetase and ligase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339289639|gb|AEJ43749.1| AMP-dependent synthetase and ligase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 566
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 179/394 (45%), Gaps = 57/394 (14%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P I +TSGTTG PKG +++H +L+ + A + + DV L P CHI GLS
Sbjct: 203 PADVAAIVYTSGTTGVPKGAMLTHQSLLFSANRMNAALENSDRDVVLVVVPACHIFGLSV 262
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR--- 180
+ +++G+ VF+ +F + + VE+ VT + ++T+ ++ R
Sbjct: 263 TLMGVLMGSTVVFMEQFHPEDVFKVVEREKVT-------VHHGVSTMFVLELNHPNRKHY 315
Query: 181 --DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
S++ + P E+++ + ++S YGMTE S +LT +
Sbjct: 316 DLSSLRTGIVAAAPCPYEIVQRIRSELGLNPILS-YGMTECSPALTATHFENE------- 367
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYW 293
P + VG+P P V L V + + HVG ++ +ML Y+
Sbjct: 368 -PWVYAT-------------VGRPLPGVALAVVDENGNFLPPDHVGELVANSPGLMLGYY 413
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
+ A + W TGD+ SI++ G V +VGR I GG +YP+EVE +L Q P
Sbjct: 414 NNEEATKAAIDERGWFHTGDLASINEAGYVTIVGRIKEMINRGGLKIYPKEVEELLYQLP 473
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
+ VVG+ + L E ACV L+ +E E +R++CR+ N
Sbjct: 474 AVQEAAVVGVPDPVLGERSCACVTLKPGHTLTE----------------EEIREYCRQ-N 516
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 447
L FK P F+ PL S+GKI + E+ +++
Sbjct: 517 LADFKVPD-FIEILDEMPLNSSGKIYKLELAKQM 549
>gi|389862089|ref|YP_006364329.1| feruloyl-CoA synthetase [Modestobacter marinus]
gi|388484292|emb|CCH85826.1| Feruloyl-CoA synthetase [Modestobacter marinus]
Length = 514
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 190/381 (49%), Gaps = 48/381 (12%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 127
+I +TSGTTG PKG V++H + ++++ + D+ L APL HIGGL+ +
Sbjct: 167 LIMYTSGTTGRPKGAVLTHGNMTWSCMSQVLGFDFAPDERTLALAPLFHIGGLNGTLNPT 226
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 185
LM G C V + F+ + L+ + + VTS VP ++ L+ + ++ D +++
Sbjct: 227 LMRGGCGVLVRGFDPPATLQVISEQRVTSFFAVPTMLDALSR----QPGFQTLDLSALRT 282
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT--LETPGQLPQAF 243
I G LP L++ + + AYGMTE++ + T + D + + G+ PQ F
Sbjct: 283 IGAAGAPLPLPLLRTWLDR--GVTVQQAYGMTESAPAGTALDSADAVSHVGSAGK-PQFF 339
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 303
+V V +P G P P E VG I+ G ++M YW+ A + +
Sbjct: 340 TDV---RVVRPDGT----PCPPGE----------VGEIVLSGPNIMAGYWNAPEAT-AAA 381
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W +GD GS+D+ G +++ R I SGGENVYP EVE+V+L+ P + + V+G+
Sbjct: 382 IVDGWYHSGDAGSVDEDGYLYIRDRYKDMIISGGENVYPAEVESVMLELPEVQEVAVIGV 441
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ E+ +A V ++++ + LR RE+ L GFK P+
Sbjct: 442 PDPHWGEVGMAVV----------VPAPGAAQD------GDALRARLRER-LAGFKVPK-E 483
Query: 424 VLWRKPFPLTSTGKIRRDEVR 444
V + P T+TGKIR+ ++R
Sbjct: 484 VRYVTELPKTATGKIRKPDLR 504
>gi|423615093|ref|ZP_17590927.1| hypothetical protein IIO_00419 [Bacillus cereus VD115]
gi|401261949|gb|EJR68100.1| hypothetical protein IIO_00419 [Bacillus cereus VD115]
Length = 561
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 184/389 (47%), Gaps = 53/389 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAK---IAIVGYGEDDVYLHTAPLCHIGGLSSAM 125
++ +T GTTG PKGV+++H L+ +L + GE+ V L P H+ G+++ M
Sbjct: 208 LLQYTGGTTGFPKGVMLTHKNLVSNTLMGAHWLYNCKEGEE-VILGVLPFFHVYGMTAVM 266
Query: 126 AM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ +M G V IPKF+ K EA+++H VT P I L +K+ S++
Sbjct: 267 NLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQ 324
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
++G LP E+ +E S KL+ YG+TE+S L++ ++P + G
Sbjct: 325 ACISGSAPLPVEV-QEEFESVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIG 377
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 378 VPWPDTESIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETA 423
Query: 305 G---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +
Sbjct: 424 AVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTI 483
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + E V A V L+E + SE DQ ++ K L +K P+
Sbjct: 484 GVPDPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPK 526
Query: 422 LFVLWRKPFPLTSTGKIRR----DEVRRE 446
++ +R P T+ GKI R DE +R+
Sbjct: 527 VYE-FRDELPKTTVGKILRRVLIDEEKRK 554
>gi|423440742|ref|ZP_17417648.1| hypothetical protein IEA_01072 [Bacillus cereus BAG4X2-1]
gi|423449090|ref|ZP_17425969.1| hypothetical protein IEC_03698 [Bacillus cereus BAG5O-1]
gi|423463806|ref|ZP_17440574.1| hypothetical protein IEK_00993 [Bacillus cereus BAG6O-1]
gi|423533159|ref|ZP_17509577.1| hypothetical protein IGI_00991 [Bacillus cereus HuB2-9]
gi|423541578|ref|ZP_17517969.1| hypothetical protein IGK_03670 [Bacillus cereus HuB4-10]
gi|401128539|gb|EJQ36228.1| hypothetical protein IEC_03698 [Bacillus cereus BAG5O-1]
gi|401171422|gb|EJQ78652.1| hypothetical protein IGK_03670 [Bacillus cereus HuB4-10]
gi|402418515|gb|EJV50810.1| hypothetical protein IEA_01072 [Bacillus cereus BAG4X2-1]
gi|402421013|gb|EJV53280.1| hypothetical protein IEK_00993 [Bacillus cereus BAG6O-1]
gi|402464200|gb|EJV95898.1| hypothetical protein IGI_00991 [Bacillus cereus HuB2-9]
Length = 561
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 184/389 (47%), Gaps = 53/389 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAK---IAIVGYGEDDVYLHTAPLCHIGGLSSAM 125
++ +T GTTG PKGV+++H L+ +L + GE+ V L P H+ G+++ M
Sbjct: 208 LLQYTGGTTGFPKGVMLTHKNLVSNTLMGAHWLYNCKEGEE-VILGVLPFFHVYGMTAVM 266
Query: 126 AM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ +M G V IPKF+ K EA+++H VT P I L +K+ S++
Sbjct: 267 NLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQ 324
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
++G LP E+ +E S KL+ YG+TE+S L++ ++P + G
Sbjct: 325 ACISGSAPLPVEV-QEEFESVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIG 377
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 378 VPWPDTESIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETA 423
Query: 305 G---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +
Sbjct: 424 AVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTI 483
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + E V A V L+E + SE DQ ++ K L +K P+
Sbjct: 484 GVPDPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPK 526
Query: 422 LFVLWRKPFPLTSTGKIRR----DEVRRE 446
++ +R P T+ GKI R DE +R+
Sbjct: 527 VYE-FRDELPKTTVGKILRRVLIDEEKRK 554
>gi|167033483|ref|YP_001668714.1| acyl-CoA synthetase [Pseudomonas putida GB-1]
gi|166859971|gb|ABY98378.1| AMP-dependent synthetase and ligase [Pseudomonas putida GB-1]
Length = 557
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 173/382 (45%), Gaps = 47/382 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG +SHS ++ +G E D + PL H G+ A M
Sbjct: 206 IQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHDRLVVPVPLYHCFGMVMANLGCM 265
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ P F+ + L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTLIYPNDAFDPLATLRAVAEEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T LE VT
Sbjct: 324 MAGATCPIEVMRRVIGEMHMAEVQIAYGMTETSP-VSLQTCATDDLER---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E KV +DG + +G + TRG VML YW+ A
Sbjct: 374 ----------SVGRTQPRLENKVIDNDGGTVPRGEIGELCTRGYSVMLGYWNNPKATAES 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ W+ TGD+ +D+ G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDEDGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ ++ E +VA VRL SE E LR+ + + + FK PR
Sbjct: 484 VPCSKYGEEIVAWVRLHPGHAASE----------------EELREWAKAR-IAHFKVPRY 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVR 444
F + FP+T TGK+++ +R
Sbjct: 527 FRFVDE-FPMTVTGKVQKFRMR 547
>gi|229098982|ref|ZP_04229917.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus Rock3-29]
gi|228684480|gb|EEL38423.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus Rock3-29]
Length = 582
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 184/389 (47%), Gaps = 53/389 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAK---IAIVGYGEDDVYLHTAPLCHIGGLSSAM 125
++ +T GTTG PKGV+++H L+ +L + GE+ V L P H+ G+++ M
Sbjct: 229 LLQYTGGTTGFPKGVMLTHKNLVSNTLMGAHWLYNCKEGEE-VILGVLPFFHVYGMTAVM 287
Query: 126 AM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ +M G V IPKF+ K EA+++H VT P I L +K+ S++
Sbjct: 288 NLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQ 345
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
++G LP E+ +E S KL+ YG+TE+S L++ ++P + G
Sbjct: 346 ACISGSAPLPVEV-QEEFESVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIG 398
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 399 VPWPDTESIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETA 444
Query: 305 G---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +
Sbjct: 445 AVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTI 504
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + E V A V L+E + SE DQ ++ K L +K P+
Sbjct: 505 GVPDPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPK 547
Query: 422 LFVLWRKPFPLTSTGKIRR----DEVRRE 446
++ +R P T+ GKI R DE +R+
Sbjct: 548 VYE-FRDELPKTTVGKILRRVLIDEEKRK 575
>gi|339010936|ref|ZP_08643505.1| putative acyl-CoA ligase YngI [Brevibacillus laterosporus LMG
15441]
gi|338772270|gb|EGP31804.1| putative acyl-CoA ligase YngI [Brevibacillus laterosporus LMG
15441]
Length = 553
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 192/439 (43%), Gaps = 35/439 (7%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 73
ELQ +P LR + LG + L + + + P+ V + +T
Sbjct: 139 ELQAERLPQLRRVIYLGEERQPGMYLFKDLYELAEQVTEAEQIDCQKTIHPDSVVNMQYT 198
Query: 74 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGA 132
SGTTG PKGV++SH+ +I ++ + ++D P H G + +A + GA
Sbjct: 199 SGTTGFPKGVMLSHNNIINNAIQVASCQNLHQEDRVCIPVPFFHCFGCVMGTLACVATGA 258
Query: 133 CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
V I F+ K LE V + T+L VP + +A L S++ + G
Sbjct: 259 TMVPIITFQPKVVLEVVSKTRCTALYGVPTMF--IAELNDPTFAQYDLSSLRTGIMAGSP 316
Query: 193 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 252
P E+MK + + AYG TE+S +T T D ++E T H
Sbjct: 317 CPEEVMKNVVDKMGIRDITIAYGQTESSPVVT-QTRVDDSIE--------LRVSTVGRKH 367
Query: 253 QPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 312
P + + P E+ G + TRG VM Y+ E WL TG
Sbjct: 368 DPVEIKLMNPETGEEV-----ARGEQGELCTRGYQVMKGYYKMPEQTAQAIDSEGWLHTG 422
Query: 313 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 372
D+ ++D+ G + GR I GGEN+YP E+E L H ++ + V+G+ + E V
Sbjct: 423 DLATVDESGYYRITGRLKDMIIRGGENIYPREIEEFLYTHLKVLDVQVIGVPDPHYGEQV 482
Query: 373 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 432
+ACV++RE E L S+E L+ C+ K + FK P +V +P+
Sbjct: 483 LACVKVREG---------------ETLTSNE-LKDFCQGK-IARFKIP-YYVQIVSDYPM 524
Query: 433 TSTGKIRRDEVRREVMSHL 451
T++GKI++ ++R + + L
Sbjct: 525 TASGKIQKYKLREQAIEIL 543
>gi|111222815|ref|YP_713609.1| acyl-CoA synthetase [Frankia alni ACN14a]
gi|111150347|emb|CAJ62044.1| putative acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase)
[Frankia alni ACN14a]
Length = 518
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 175/392 (44%), Gaps = 50/392 (12%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
++ +TSGTTG PK VV H L+ Q L DDV+L T P GG+ ++ L
Sbjct: 162 LLLYTSGTTGRPKAVVHEHRTLLAQVLDTTISTESRHDDVFLATTPFFTAGGMIRTLSWL 221
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR-----DSV 183
+G V P+F+ + LE +E+ VT +P + LIR + R S+
Sbjct: 222 YLGQTMVIHPRFDPVAVLETIERWKVTMTTFIPTM------LIRTLRELDARPGIDVSSL 275
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
++I G P L +EA L YG TE +T +T D G
Sbjct: 276 RRISYGSAPAPPGLAEEAARKL-GCDLQQRYGSTEAGGQVTILTPEDHRAIFAGD----- 329
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 298
+ C G+ PH E+++ D + VG I+ R V YW++ A
Sbjct: 330 --------DALRSSC-GRETPHAEIRIVGDDGAELPRGEVGEIVVRADSVARGYWNRPEA 380
Query: 299 KPSVSTGE-VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ +W TGD+G +D+ G + + GR+ I SGG NVYP E+E VL HP +
Sbjct: 381 NAETFRPDGLW--TGDLGRLDERGYLHIAGRKTDMIISGGFNVYPAEIERVLGAHPNVDL 438
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ VVG+ + E +A V D +++N E E LR RE+ L G+
Sbjct: 439 VAVVGVPHPEWGETPIAVV---------VPKGDITTENLE-----EQLRTLSREQ-LAGY 483
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 449
K PR + +R PL GKI + E+R E+ +
Sbjct: 484 KQPRGYA-FRAQMPLGPAGKILKRELRAELAA 514
>gi|308273062|emb|CBX29666.1| Long-chain-fatty-acid--CoA ligase [uncultured Desulfobacterium sp.]
Length = 519
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 189/407 (46%), Gaps = 66/407 (16%)
Query: 56 LPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPL 115
P + + + +I FTSGTTG PKG ++H ++ + + DDV+L T PL
Sbjct: 162 FPTVQTNSSDDTAVIMFTSGTTGQPKGAELTHLNMVFNARLSDTMYETHPDDVHLITLPL 221
Query: 116 CHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL-----AT 169
H G S M A+ GA +P+F +A +++ VT VP + L A
Sbjct: 222 FHSFGQSLQMNAVFYNGATITLLPRFNPDAAFSIMQRDNVTFFAGVPTMYWALLNHPEAE 281
Query: 170 LIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLY 229
+ K +K +++ ++GG + E+MK F K++ YG++ETS + +F
Sbjct: 282 KYNLDKIYK---TLRYSVSGGSPMSLEVMKAFNEKF-HIKILEGYGLSETSPAASF---- 333
Query: 230 DPTLETPGQLPQAFGNVTPNSVH-QPQGVCVGKPAPHVELKVCSDGSSHV-----GRILT 283
N ++ + + VG P V++++ S+ V G ++
Sbjct: 334 -------------------NRINRESKAGSVGLPVWGVQIRIVSEKDEDVPQGELGELII 374
Query: 284 RGAHVMLRYWDQFLAKPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGEN 339
+G +VM Y+ KPS T E W TGDIG D+ G +++V R I GG N
Sbjct: 375 QGHNVMKGYY----KKPS-ETKEAFKNGWFHTGDIGRFDEDGYIYIVDRVKDIIIRGGFN 429
Query: 340 VYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELL 399
VYP E+E +LL HP I V+G+ + R E + A V ++ + +E
Sbjct: 430 VYPREIEEILLSHPDISIAAVIGVPDDRYGEEIKAFVVRKKGAESTE------------- 476
Query: 400 LSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 446
E +R RE N+ +K PR + +R P+++TGKI + E++++
Sbjct: 477 ---EKIRLWARE-NMAAYKYPRQ-IDFRDTLPMSATGKILKKELKQK 518
>gi|456356570|dbj|BAM91015.1| putative long-chain-fatty-acid-CoA ligase [Agromonas oligotrophica
S58]
Length = 526
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 175/391 (44%), Gaps = 49/391 (12%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIV-----QSLAKIAIVGYGEDDVYLHTAPLCHI 118
P+ + +TSGTTG PKG ++SH+ + K + DDV L P+ HI
Sbjct: 163 PQDIALQLYTSGTTGKPKGAMLSHANFLNLVNTGNPDEKPDWNKWSTDDVSLIAMPIFHI 222
Query: 119 GGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
GG + L GA V +F+ L+ EQ +T L VPA M + R ++
Sbjct: 223 GGSGWGLMSLYHGARGVVAREFDPTKILDFFEQSGITKLFMVPAAMQFVVRQPRARQVDF 282
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
R +K +L G +P+ L+KE + F K + YGMTET+ ++ + D +E +
Sbjct: 283 SR--LKYMLYGASPIPAALLKECIDVF-KCGFVQMYGMTETTGTIIALPPED-HIEGLER 338
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYW 293
+ A GKP P +E+ + DG VG I TR M YW
Sbjct: 339 MRSA-----------------GKPLPGIEVAIIDVDGRPLPPRQVGEIATRSGSNMTGYW 381
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
+ A + WL TGD G +D+ G V++ R I SGGEN+YP EVE+ L HP
Sbjct: 382 NLPEATARTLGKDGWLRTGDAGYMDEDGYVYIHDRIKDMIISGGENIYPAEVESALCDHP 441
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
+ V+GI + + E V A V ++ + +E++ ++ +
Sbjct: 442 DVAEAAVIGIPDDKWGEAVKAIVVMKPGKRATETDIINFTRTR----------------- 484
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+ GFK P+ V + P +GKI R +R
Sbjct: 485 IAGFKTPKS-VDFLDALPRNPSGKILRRNLR 514
>gi|358456935|ref|ZP_09167156.1| o-succinylbenzoate--CoA ligase [Frankia sp. CN3]
gi|357079844|gb|EHI89282.1| o-succinylbenzoate--CoA ligase [Frankia sp. CN3]
Length = 508
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 180/387 (46%), Gaps = 54/387 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +TSGTTG PKGV+I+H+ L ++ A I G+ D+ L PL H+G L ++
Sbjct: 167 LMYTSGTTGRPKGVMITHANLAWKNYAHITEFGFTAADIGLACGPLYHVGALDLVTTSII 226
Query: 130 V--GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 185
G HV F++ ++ +E+ +T + PA++ + L V GRD SV+
Sbjct: 227 AAGGTTHVH-QTFDAARVVDDIERSRITVVWMAPAMVRAVLDLPGVD----GRDLSSVRV 281
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
++ GG +P L+ FP A AYG+TET S TF+
Sbjct: 282 LIGGGEKMPLPLIDRIQKVFPSAWFADAYGLTETVSGDTFLD------------------ 323
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCS-DG----SSHVGRILTRGAHVMLRYWDQFLAKP 300
S+ +G VG+ ++EL + DG + G I+ RG V YW A
Sbjct: 324 --AGSIRAKRG-SVGRECLYLELDIWDEDGRRLPAGEAGEIVLRGPKVFKGYWRDPEATD 380
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
G W TGDIG D+ G V++V R I SGGEN+ EVE VL +HP ++ V
Sbjct: 381 RAFAGG-WFHTGDIGVRDEDGYVFIVDRLKDMILSGGENIAGSEVERVLYEHPAVLEAAV 439
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
VG + + E+ VA V R + ++++ L +HCR +L FK P
Sbjct: 440 VGRPDEKWGEVPVAFVAPRPG----------------VSVTADELVEHCR-GSLAKFKVP 482
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREV 447
+ V + P +GKI + E+R ++
Sbjct: 483 KA-VTFIDALPRNPSGKILKRELRGQL 508
>gi|229105149|ref|ZP_04235800.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus Rock3-28]
gi|228678330|gb|EEL32556.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus Rock3-28]
Length = 582
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 184/389 (47%), Gaps = 53/389 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAK---IAIVGYGEDDVYLHTAPLCHIGGLSSAM 125
++ +T GTTG PKGV+++H L+ +L + GE+ V L P H+ G+++ M
Sbjct: 229 LLQYTGGTTGFPKGVMLTHKNLVSNTLMGAHWLYNCKEGEE-VILGVLPFFHVYGMTAVM 287
Query: 126 AM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ +M G V IPKF+ K EA+++H VT P I L +K+ S++
Sbjct: 288 NLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQ 345
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
++G LP E+ +E S KL+ YG+TE+S L++ ++P + G
Sbjct: 346 ACISGSAPLPVEV-QEEFESVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIG 398
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 399 VPWPDTESIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETA 444
Query: 305 G---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +
Sbjct: 445 AVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTI 504
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + E V A V L+E + SE DQ ++ K L +K P+
Sbjct: 505 GVPDPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPK 547
Query: 422 LFVLWRKPFPLTSTGKIRR----DEVRRE 446
++ +R P T+ GKI R DE +R+
Sbjct: 548 VYE-FRDELPKTTVGKILRRVLIDEEKRK 575
>gi|423377634|ref|ZP_17354918.1| hypothetical protein IC9_00987 [Bacillus cereus BAG1O-2]
gi|423547811|ref|ZP_17524169.1| hypothetical protein IGO_04246 [Bacillus cereus HuB5-5]
gi|423622402|ref|ZP_17598180.1| hypothetical protein IK3_01000 [Bacillus cereus VD148]
gi|401178248|gb|EJQ85428.1| hypothetical protein IGO_04246 [Bacillus cereus HuB5-5]
gi|401261122|gb|EJR67286.1| hypothetical protein IK3_01000 [Bacillus cereus VD148]
gi|401638002|gb|EJS55754.1| hypothetical protein IC9_00987 [Bacillus cereus BAG1O-2]
Length = 561
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 184/389 (47%), Gaps = 53/389 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAK---IAIVGYGEDDVYLHTAPLCHIGGLSSAM 125
++ +T GTTG PKGV+++H L+ +L + GE+ V L P H+ G+++ M
Sbjct: 208 LLQYTGGTTGFPKGVMLTHKNLVSNTLMGAHWLYNCKEGEE-VILGVLPFFHVYGMTAVM 266
Query: 126 AM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ +M G V IPKF+ K EA+++H VT P I L +K+ S++
Sbjct: 267 NLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQ 324
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
++G LP E+ +E S KL+ YG+TE+S L++ ++P + G
Sbjct: 325 ACISGSAPLPVEV-QEEFESVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIG 377
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 378 VPWPDTESIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETA 423
Query: 305 G---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +
Sbjct: 424 AVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTI 483
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + E V A V L+E + SE DQ ++ K L +K P+
Sbjct: 484 GVPDPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPK 526
Query: 422 LFVLWRKPFPLTSTGKIRR----DEVRRE 446
++ +R P T+ GKI R DE +R+
Sbjct: 527 VYE-FRDELPKTTVGKILRRVLIDEEKRK 554
>gi|206977731|ref|ZP_03238622.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus H3081.97]
gi|217962009|ref|YP_002340579.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus AH187]
gi|423355009|ref|ZP_17332634.1| hypothetical protein IAU_03083 [Bacillus cereus IS075]
gi|423570756|ref|ZP_17547001.1| hypothetical protein II7_03977 [Bacillus cereus MSX-A12]
gi|206744032|gb|EDZ55448.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus H3081.97]
gi|217062994|gb|ACJ77244.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus AH187]
gi|401085588|gb|EJP93827.1| hypothetical protein IAU_03083 [Bacillus cereus IS075]
gi|401203383|gb|EJR10222.1| hypothetical protein II7_03977 [Bacillus cereus MSX-A12]
Length = 561
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 185/388 (47%), Gaps = 51/388 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGE-DDVYLHTAPLCHIGGLSSAMA 126
++ +T GTTG PKGV+++H L+ +L + + E ++V L P H+ G+++ M
Sbjct: 208 LLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFFHVYGMTAVMN 267
Query: 127 M-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ +M G V IPKF+ K EA+++H VT P I L +K+ S++
Sbjct: 268 LSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRA 325
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
++G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 326 CISGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGV 378
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 305
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 379 PWPDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAA 424
Query: 306 ---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G
Sbjct: 425 VLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIG 484
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + E V A V L+E + SE +Q ++ K L +K P++
Sbjct: 485 VPDPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKV 527
Query: 423 FVLWRKPFPLTSTGKIRR----DEVRRE 446
+ +R P T+ GKI R DE +R+
Sbjct: 528 YE-FRDELPKTTVGKILRRVLIDEEKRK 554
>gi|229118011|ref|ZP_04247371.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus Rock1-3]
gi|228665460|gb|EEL20942.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus Rock1-3]
Length = 577
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 184/389 (47%), Gaps = 53/389 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAK---IAIVGYGEDDVYLHTAPLCHIGGLSSAM 125
++ +T GTTG PKGV+++H L+ +L + GE+ V L P H+ G+++ M
Sbjct: 224 LLQYTGGTTGFPKGVMLTHKNLVSNTLMGAHWLYNCKEGEE-VILGVLPFFHVYGMTAVM 282
Query: 126 AM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ +M G V IPKF+ K EA+++H VT P I L +K+ S++
Sbjct: 283 NLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQ 340
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
++G LP E+ +E S KL+ YG+TE+S L++ ++P + G
Sbjct: 341 ACISGSAPLPVEV-QEEFESVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIG 393
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 304
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 394 VPWPDTESIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETA 439
Query: 305 G---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +
Sbjct: 440 AVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTI 499
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + E V A V L+E + SE DQ ++ K L +K P+
Sbjct: 500 GVPDPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPK 542
Query: 422 LFVLWRKPFPLTSTGKIRR----DEVRRE 446
++ +R P T+ GKI R DE +R+
Sbjct: 543 VYE-FRDELPKTTVGKILRRVLIDEEKRK 570
>gi|229141256|ref|ZP_04269795.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus BDRD-ST26]
gi|375286523|ref|YP_005106962.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus NC7401]
gi|228642297|gb|EEK98589.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus BDRD-ST26]
gi|358355050|dbj|BAL20222.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus NC7401]
Length = 563
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 185/388 (47%), Gaps = 51/388 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGE-DDVYLHTAPLCHIGGLSSAMA 126
++ +T GTTG PKGV+++H L+ +L + + E ++V L P H+ G+++ M
Sbjct: 210 LLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFFHVYGMTAVMN 269
Query: 127 M-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ +M G V IPKF+ K EA+++H VT P I L +K+ S++
Sbjct: 270 LSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRA 327
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
++G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 328 CISGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGV 380
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 305
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PWPDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAA 426
Query: 306 ---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G
Sbjct: 427 VLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIG 486
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + E V A V L+E + SE +Q ++ K L +K P++
Sbjct: 487 VPDPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKV 529
Query: 423 FVLWRKPFPLTSTGKIRR----DEVRRE 446
+ +R P T+ GKI R DE +R+
Sbjct: 530 YE-FRDELPKTTVGKILRRVLIDEEKRK 556
>gi|148557266|ref|YP_001264848.1| AMP-dependent synthetase and ligase [Sphingomonas wittichii RW1]
gi|148502456|gb|ABQ70710.1| AMP-dependent synthetase and ligase [Sphingomonas wittichii RW1]
Length = 539
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 178/402 (44%), Gaps = 48/402 (11%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 116
P P+ I FTSGTTG PKG +SH ++ +G D PL
Sbjct: 171 PLPRDVRPDDPTNIQFTSGTTGLPKGATLSHRNIVNNGYMVGHRIGLSSADTLCIPVPLY 230
Query: 117 HIGGLSSA-MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVK 174
H G+ +A + GA F + F+ S LEAV T+L VP + +
Sbjct: 231 HCFGMVMGNLACVAHGATMCFPGEGFDPGSTLEAVAAEGCTALYGVPTMFVAMLEYPDFD 290
Query: 175 KTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 234
+ G +++ + G P +M+ + ++ AYGMTETS ++F + D +E
Sbjct: 291 RHDLG--TLRTGIMAGSLCPISVMRAVLDRMNMREVTIAYGMTETSP-VSFQSAMDDAIE 347
Query: 235 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVM 289
+ VG+ PH+E KV +DG G + TRG VM
Sbjct: 348 L-------------------RVSTVGQVQPHLEAKVVDADGKVVPLGEPGELCTRGYSVM 388
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
L YW V E W+ TGD+ ++D+ G +VGR I GGEN+YP E+E L
Sbjct: 389 LGYWGDPEKTADVIDAEGWMHTGDLATLDEQGYGRIVGRIKDMIIRGGENIYPREIEEHL 448
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
L HP I+ + G+ +A+ E V A W S S LS E + HC
Sbjct: 449 LTHPDIVDAQIFGVPDAKFGEEVCA-------WVISRSGA----------LSVEAVIAHC 491
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
R++ + +K PR L + FPLT TGK+++ +R +++ L
Sbjct: 492 RDR-IAHYKVPRHVRLVEQ-FPLTVTGKVQKFAMREIMVAEL 531
>gi|392962834|ref|ZP_10328262.1| AMP-dependent synthetase and ligase [Pelosinus fermentans DSM
17108]
gi|421056398|ref|ZP_15519315.1| AMP-dependent synthetase and ligase [Pelosinus fermentans B4]
gi|421060849|ref|ZP_15523270.1| AMP-dependent synthetase and ligase [Pelosinus fermentans B3]
gi|421068374|ref|ZP_15529693.1| AMP-dependent synthetase and ligase [Pelosinus fermentans A12]
gi|421069806|ref|ZP_15530967.1| AMP-dependent synthetase and ligase [Pelosinus fermentans A11]
gi|392437578|gb|EIW15440.1| AMP-dependent synthetase and ligase [Pelosinus fermentans B4]
gi|392443329|gb|EIW20872.1| AMP-dependent synthetase and ligase [Pelosinus fermentans A12]
gi|392449771|gb|EIW26869.1| AMP-dependent synthetase and ligase [Pelosinus fermentans A11]
gi|392451509|gb|EIW28495.1| AMP-dependent synthetase and ligase [Pelosinus fermentans DSM
17108]
gi|392453891|gb|EIW30748.1| AMP-dependent synthetase and ligase [Pelosinus fermentans B3]
Length = 497
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 197/418 (47%), Gaps = 56/418 (13%)
Query: 41 DMLTADILKGYSLRSLP---FTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAK 97
+L DI S +S P + ++ I +TSGTTG+PKG +++H L+ + A
Sbjct: 123 QLLITDISHTVSQQSFPPAPVSQTFDENEVCTIIYTSGTTGNPKGAMLTHKNLVSNAQAF 182
Query: 98 IAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPKFESKSALEAVEQHCVTS 156
+ Y +D L P+ H ++A + L+ G+ + + F + + A++ H +T
Sbjct: 183 SQVFTYQHEDRILCVLPMYHCFAWTAAVLTPLLNGSSILILENFSIRETISAIKDHALTV 242
Query: 157 LITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGM 216
+ +P + LA R +K + VK +++GG LP E+ ++ T K+ ++ YG+
Sbjct: 243 IFGIPNMFRLLAQ--RAQK--EDFLHVKLLVSGGSSLPQEISEQFTKKIGKS-VVEGYGL 297
Query: 217 TETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK-VCSDGS 275
+E S ++ N VH+ + +GKP P +E++ V +D
Sbjct: 298 SEASPIVSL-----------------------NPVHKVKYRSIGKPLPGIEVRIVTTDNQ 334
Query: 276 SHV----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNG 331
S V G +L RG +VM Y+ + + + + WL TGD+ +D G +++V R
Sbjct: 335 SLVPGETGELLVRGPNVMHGYY-RLPEETAKALQNGWLHTGDLAYMDQDGYLFIVDRLKD 393
Query: 332 RIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQ 391
I GEN+YP E+E +L +P I V+GI N + +V A + + E + D+
Sbjct: 394 MIIINGENIYPREIEELLYAYPAIAEAAVIGIPNKQHGTLVQAYLTVNEGF-----TIDK 448
Query: 392 SSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 449
+ L +K L +K P+ F++ P +STGKI + +R++ M+
Sbjct: 449 KAVKSYL------------QKKLAPYKIPKEFIIIDS-LPKSSTGKILKTVLRQQAMN 493
>gi|339487838|ref|YP_004702366.1| acyl-CoA synthetase [Pseudomonas putida S16]
gi|338838681|gb|AEJ13486.1| acyl-CoA synthetase [Pseudomonas putida S16]
Length = 602
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 174/384 (45%), Gaps = 47/384 (12%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM 127
+ I +TSGTTG PKG +SHS ++ +G E D + PL H G+ A
Sbjct: 249 INIQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHDRLVVPVPLYHCFGMVMANLG 308
Query: 128 LMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
M + P F+ + L AV + T+L VP + +A L ++ S++
Sbjct: 309 CMTHGSTLIYPNDAFDPLATLRAVAEEKATALYGVPTMF--IAELDHPQRGEFDLSSLRT 366
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E+M+ A++ AYGMTETS ++ T LE
Sbjct: 367 GIMAGATCPIEVMRRVIGEMHMAEVQIAYGMTETSP-VSLQTGASDDLER---------R 416
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKP 300
VT VG+ P +E KV +DG++ +G + TRG VML YW+ A
Sbjct: 417 VT----------SVGRTQPRLENKVIDADGNTLPRGEIGELCTRGYSVMLGYWNNPKATA 466
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
E W+ TGD+ +D+ G V +VGR I GGEN+YP E+E HP + + V
Sbjct: 467 ESIDEEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQV 526
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ ++ E +VA VRL S+E LR + + + FK P
Sbjct: 527 IGVPCSKYGEEIVAWVRLHPGHT----------------ASAEELRDWAKAR-IAHFKVP 569
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVR 444
R F + FP+T TGK+++ +R
Sbjct: 570 RYFRFVDE-FPMTVTGKVQKFRMR 592
>gi|307731457|ref|YP_003908681.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1003]
gi|307585992|gb|ADN59390.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1003]
Length = 576
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 206/453 (45%), Gaps = 61/453 (13%)
Query: 14 ELQHTAIPSLRWHVSL------GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGA 67
EL +P LR+ + + G S V +R T D+ K ++ + H
Sbjct: 164 ELHAARLPELRYVIRMCDTETPGMLSFSDVIERGRATLDVAKLDAIAATLSCHE-----P 218
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MA 126
+ I FTSGTTG+PKG ++HS ++ + + E D PL H G+ A +A
Sbjct: 219 INIQFTSGTTGNPKGATLTHSNVVNNARYIAMAMNLSEQDALCIPVPLYHCFGMVLAVLA 278
Query: 127 MLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ VGA VF + F+ + L AV + T+L VP + +A L ++
Sbjct: 279 CVSVGANMVFPGEGFDPAATLAAVAEEKCTALHGVPTMF--IAELDHPDFASYDLSRLRT 336
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E MK+ + +++ AYGMTETS P +F +
Sbjct: 337 GIMAGSPCPIETMKKVVSRMHLSEITIAYGMTETS-------------------PVSFQS 377
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYW-DQFLAK 299
T + + + + VG+ PH+E+K+ + +G + TRG VM YW D+ +
Sbjct: 378 STTDPLDK-RTTTVGRIQPHLEVKIIDSLGNVVPVGEIGELCTRGYSVMQGYWGDEEKTR 436
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
SV G W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I +
Sbjct: 437 ESVVDG--WMHTGDLATLDAEGYCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQ 494
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V G+ +A+ E V A V L ++E ++Q C + +K
Sbjct: 495 VFGVPDAKYGEEVCAWVVLHAGEH----------------ATAEEIQQFCH-GQIAHYKV 537
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
P+ ++ + P+T TGK+++ +R+ ++ LK
Sbjct: 538 PK-YIRFVDELPMTVTGKVQKFVMRQRMIDELK 569
>gi|407695713|ref|YP_006820501.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407253051|gb|AFT70158.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 505
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 175/395 (44%), Gaps = 64/395 (16%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
+P+ + +TSGTTG PKGVV + ++ L V +DV L+ PL H G++
Sbjct: 158 SPDTPWYLLYTSGTTGRPKGVVQTFRMMLANYLNIGLAVNLTGEDVLLNVLPLFHTAGIN 217
Query: 123 -SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL-------ATLIRVK 174
+ A+ VG + FE + ALE +EQ T VPA+ L +R
Sbjct: 218 LYSSAVFFVGGAVLVARNFEPQQALEILEQRA-TIFFGVPAVYQALLEQPGFSGERLRRV 276
Query: 175 KTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 234
++W G GG P L + + + GMTET ++ F+ D +E
Sbjct: 277 RSW-----------GCGGAPLSLPVAQSYVEHGIHVRTGMGMTETGPTV-FLLDEDKVIE 324
Query: 235 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DG----SSHVGRILTRGAHVM 289
G VG+P E+++ DG G +L RG ++
Sbjct: 325 KIG--------------------SVGRPQLLTEVRIVDRDGRDVPDGEAGELLIRGPNIT 364
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
YW++ A + WL +GD+ D+ G ++V R SGGENVYP EVE L
Sbjct: 365 PGYWNRPDATAEAIEADGWLHSGDVARRDNDGFYYIVDRWKDMYISGGENVYPAEVEKAL 424
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
QHP I + VVGIA+ R E+ AC LR +S+ D+ + LR HC
Sbjct: 425 EQHPAIAEVAVVGIADERWGEVGKACYVLR-----PDSHVDEDA-----------LRAHC 468
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
RE+ L G+K P++F P + GK+ + E+R
Sbjct: 469 RER-LAGYKVPKVFQCL-PALPRNALGKVTKQELR 501
>gi|328957926|ref|YP_004375312.1| long-chain-fatty-acid--CoA ligase [Carnobacterium sp. 17-4]
gi|328674250|gb|AEB30296.1| long-chain-fatty-acid--CoA ligase [Carnobacterium sp. 17-4]
Length = 503
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 179/395 (45%), Gaps = 67/395 (16%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS- 123
E ++ +T+GTTG PKG VI+H+ +I S+ + +D+ + +AP+ HI G+S
Sbjct: 150 ESPAMLIYTTGTTGHPKGAVITHNGMINNSMNTVMSWNISHEDITIASAPMFHIAGISGI 209
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR-DS 182
+ +L++G + F+ ++A E ++++ T L VP + LIR K KG +S
Sbjct: 210 VIPLLLIGGKIIIDRFFDGENANEMIKRYKPTMLFMVPTMYYG---LIRAKNFSKGNLES 266
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAK--LISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
V + GG S +KE N F + K LI++YG+TE P
Sbjct: 267 VNTFVAGG----SPPLKEVVNYFVREKLPLINSYGLTEAG-------------------P 303
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQ 295
F +++ P +G P+ VE K+ D VG +L G H YW+
Sbjct: 304 NNFKLTGESALKHP--FSIGYPSFFVEAKIVDDNGEEVEQGQVGELLLAGQHTFAGYWNN 361
Query: 296 FLAKPSVSTGEVWLD----TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 351
V T + + D TGD+ D+ G ++V R+ I +GGENV P EVE VL
Sbjct: 362 -----EVETRKAFQDDYVRTGDLAKKDENGLFYIVDRKKEMIITGGENVLPSEVEKVLNH 416
Query: 352 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD-QSSKNKELLLSSEVLRQHCR 410
PG+ VVVG + + V A + CD Q + EL H
Sbjct: 417 LPGVKDSVVVGYEHPVYGQSVGAAII-----------CDGQKIEVAEL--------DHYA 457
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
NL G+K P+ + L+ FP S GK + E+ R
Sbjct: 458 SANLAGYKTPKQY-LFLTAFPNNSVGKTDKKEIIR 491
>gi|229492633|ref|ZP_04386436.1| long-chain-fatty-acid--CoA ligase [Rhodococcus erythropolis SK121]
gi|229320619|gb|EEN86437.1| long-chain-fatty-acid--CoA ligase [Rhodococcus erythropolis SK121]
Length = 529
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 188/397 (47%), Gaps = 58/397 (14%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY--GEDDVYLHTAPLCHIGGL 121
P +I +TSGTTG PKG ++H +++ +L+ + + YL T PL H G
Sbjct: 171 PTDTAVILYTSGTTGKPKGAELTHCNMVLNALSTNRLFESVPSMHERYLLTLPLFHSFGQ 230
Query: 122 SSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIM-ADLATLIRVKKTWKG 179
+ M A + VGA V +P+F++ +ALE +E+ ++ VP + L L V K+
Sbjct: 231 TVTMNAGICVGATLVLMPRFDATAALEIMEREKISVFAGVPTMYWGLLGVLDEVVKSGVD 290
Query: 180 RDSVKK----ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
++V + ++GG LP E++ + F +++ YG++ETS F DP
Sbjct: 291 IETVAQNMRCAISGGAALPVEILTQFRERF-GVQILEGYGLSETSPLALFS---DPE--- 343
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-------VGRILTRGAHV 288
P+ +G P VE ++ DGS H VG + RG +V
Sbjct: 344 ----------------SDPRPGSIGVPIWGVEARLV-DGSWHTIAGPDEVGELAIRGHNV 386
Query: 289 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 348
M Y+++ A V + W TGD+ +D GN ++V R I GG NVYP E+E V
Sbjct: 387 MKGYFNRPEATAEVMR-DGWFRTGDLARVDTDGNYYIVDRAKDMIVRGGFNVYPREIEEV 445
Query: 349 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 408
LL HP + + VVG+ + L E VVA V S + SES+ + S+ +
Sbjct: 446 LLTHPAVSLVAVVGVPDTSLGEEVVAFVIREPSEEISESDLVEWSREQ------------ 493
Query: 409 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
+ +K PR + + P+T+TGKI + E+ +
Sbjct: 494 -----MAAYKYPRR-IEFVPSLPMTATGKILKRELNQ 524
>gi|118353005|ref|XP_001009773.1| AMP-binding enzyme family protein [Tetrahymena thermophila]
gi|89291540|gb|EAR89528.1| AMP-binding enzyme family protein [Tetrahymena thermophila SB210]
Length = 589
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 181/403 (44%), Gaps = 47/403 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLS 122
P+ A I FTSGTTG+PKG ++H ++ +G + D + PL H G +
Sbjct: 218 PDDATNIQFTSGTTGNPKGATLTHFNILNNGYLLGQRLGLVQSDKICLSVPLYHCFGMVM 277
Query: 123 SAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+A L G+ + +P F + ++++V ++ +T++ VP + +
Sbjct: 278 GNLAALNYGST-IVLPSEGFNPQHSMQSVGEYQITTMYGVPTMFYEYIKEYEHNPKLYNI 336
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
+++K + G P LM + N + L AYGMTETS P
Sbjct: 337 STLRKGIMAGALCPQSLMSKLINEWKMTDLQIAYGMTETS-------------------P 377
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQ 295
+F + +++ G VGK PH E K+ + G + RG VM +YW
Sbjct: 378 ISFQTESSDNLEDKCGT-VGKIFPHTEAKIINSKGKILERGQSGELCIRGYPVMQKYWAD 436
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
WL TGD+ +DD G V +VGR I GGEN+YP+E+E L HP I
Sbjct: 437 IRNTNKTIDTNGWLKTGDVAVMDDRGYVKIVGRIKEMIIRGGENIYPKEIEEFLRTHPSI 496
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ + VVG+ N + E A +RL+ Q+ + K L ++ + C+ + +
Sbjct: 497 MDVQVVGVPNQKFGEETFALIRLK-----------QNQEVKPLDIA-----EFCKGQ-IA 539
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 458
+K P+ +V + FPLT TGK ++ ++ + + NL
Sbjct: 540 HYKVPK-YVKFVDSFPLTITGKPQKFKMVASIKEEMNGSEQNL 581
>gi|344924690|ref|ZP_08778151.1| long-chain-fatty-acid--CoA ligase [Candidatus Odyssella
thessalonicensis L13]
Length = 531
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 190/397 (47%), Gaps = 59/397 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALI---VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM 125
++ +T GTTGSPKG ++SH + VQ+ + YG++ + L PL H+ +++ M
Sbjct: 180 LLQYTGGTTGSPKGAMLSHYNVYANSVQACTWFEGITYGQEKI-LAGLPLFHVYAMTAVM 238
Query: 126 AMLMVGACHV--FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
+ + A + P+F A++A+++H +T VP + +A RVK+ +S+
Sbjct: 239 TLAIQTAAEIVMMFPRFNPLDAMKAIQKHRITFFPGVPTMYNMIANHPRVKEM--DLNSL 296
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
K L+GG LP ++ KE S KL+ AYG++ETS +
Sbjct: 297 KICLSGGAPLPIKV-KEDFESLTGCKLVEAYGLSETSPA--------------------- 334
Query: 244 GNVTPNSVHQPQGV-CVGKPAPHVELKVCS-DGSS------HVGRILTRGAHVMLRYWDQ 295
T N V+ + +G P P ++K+ S D + G+I +G VML YW++
Sbjct: 335 --ATSNPVYGINKIGSIGIPFPGTQIKILSLDNPAKEMKIRENGQIAIKGPQVMLGYWNR 392
Query: 296 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 355
V G+ L TGD+G +D+ G +LV R I G NVYP VE V+ +H +
Sbjct: 393 SDETEKVFVGDFLL-TGDVGYMDEDGYTFLVDRIKDLIICSGFNVYPRMVEEVIYRHHSV 451
Query: 356 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 415
+ V+GI + + E V A V+L+E + SE E LL + + L+
Sbjct: 452 AEVTVIGIPDEKRGETVKAFVKLKEGAELSE----------EQLL-------NFLQGKLS 494
Query: 416 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ P+ F+ +R P T GK+ + E++ E S K
Sbjct: 495 PIEMPK-FIEFRDELPKTMIGKLSKKELKAEERSKQK 530
>gi|226365581|ref|YP_002783364.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus B4]
gi|226244071|dbj|BAH54419.1| putative fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 530
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 200/439 (45%), Gaps = 66/439 (15%)
Query: 20 IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 79
+P L + +G+ + V + L A+ ++ LP + +I +TSGTTG+
Sbjct: 135 VPDLGLAIVMGAETEADVLGYEDLVAEDGPAFAPVDLP------EDTPSLILYTSGTTGT 188
Query: 80 PKGVVISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 138
PKG V+SHS ++ QS+ I + Y DDV +P+ H+ L S MLM+GA V P
Sbjct: 189 PKGAVLSHSNMVGQSITCIRAMRYDRGDDVGFLASPVFHVAALGSVAPMLMLGATTVIHP 248
Query: 139 --KFESKSALEAVEQHCVTSLITVP----AIMADLATLIRVKKTWKGRDSVKKILNGGGG 192
F+ L+ E+ +T++ VP A+ AD T GRD ++++ G
Sbjct: 249 LKAFDPTEMLDVWERERITTVFLVPVQWQAVCAD--------PTAAGRDLALRVISWGAA 300
Query: 193 LPSE-LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 251
S+ +++ +FPKA +++ +G TE S +T + D + G
Sbjct: 301 PASDTVLRAMAATFPKALVVAVFGQTEMSP-ITCVLDGDDAIRKLG-------------- 345
Query: 252 HQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 306
VGKP P ++ ++ D VG I+ RG +M YW A G
Sbjct: 346 ------SVGKPVPTIQTRIVDDEMNDVAPGTVGEIVYRGPTMMQGYWQNPAATADAFAGG 399
Query: 307 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 366
W +GD+ D+ G V++V R+ I SGGEN+Y EVE VL HP I VVG +
Sbjct: 400 -WFHSGDLVRQDEEGFVYVVDRKKDMIISGGENIYCAEVENVLFGHPRIREAAVVGRPHP 458
Query: 367 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 426
+ TE+ VA V L + L+ + L +K L +K P+ V+
Sbjct: 459 KWTEVPVAIVAL---------------DDDGDDLTVDELAAWLDDK-LARYKHPKDIVV- 501
Query: 427 RKPFPLTSTGKIRRDEVRR 445
P ++GK+ + E+R+
Sbjct: 502 VDALPRNASGKVVKGELRK 520
>gi|335419331|ref|ZP_08550386.1| AMP-binding domain protein [Salinisphaera shabanensis E1L3A]
gi|335420996|ref|ZP_08552026.1| AMP-binding domain protein [Salinisphaera shabanensis E1L3A]
gi|334893170|gb|EGM31388.1| AMP-binding domain protein [Salinisphaera shabanensis E1L3A]
gi|334896948|gb|EGM35090.1| AMP-binding domain protein [Salinisphaera shabanensis E1L3A]
Length = 566
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 193/453 (42%), Gaps = 47/453 (10%)
Query: 6 ESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPE 65
E +D EL A+P L + LG + + D L A + R +
Sbjct: 144 ELADCAPGELACKALPDLEMIIRLGDERTPGMLNFDDLPARAGPADAARVEELAGLLQAD 203
Query: 66 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA- 124
+ I FTSGTTG PKG +SH ++ L +G DD PL H G+
Sbjct: 204 DPINIQFTSGTTGRPKGATLSHHNILNNGLFVGEGMGLTADDRIAVPVPLYHCFGMVMGN 263
Query: 125 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
+ L GA V+ P FE + LEA T+L VP + +A + S+
Sbjct: 264 LGALTHGAAVVYPAPSFEPTATLEAAAAERCTALYGVPTMF--IAEMGVPDFADYDLSSL 321
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ + G P +M+ + +I YGMTETS ++ T D +
Sbjct: 322 RTGIMAGSPCPQAVMQRVIDEMHMQDVIICYGMTETSP-VSCQTEMDDEM---------- 370
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLA 298
Q + VG+ PH+E+K+ DG G TRG VML YWD
Sbjct: 371 ---------QARVATVGRVLPHLEIKIVDIDGRVVPRGEPGEYCTRGYSVMLGYWDDAER 421
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
W+ TGD+ +D+ G +VGR + GGEN+YP E+E L +HP + +
Sbjct: 422 SAEAIDSARWMHTGDLAVMDEAGYCRIVGRLKDMVIRGGENIYPREIEEYLYRHPAVADV 481
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
VVG+ +AR E + A V+L E+ LR C + + +K
Sbjct: 482 QVVGVPDARYGEELCAWVQLAAGETLDEA----------------ALRAFC-DGEIAHYK 524
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
PR ++ + + FPLT TGK+++ +R +++S L
Sbjct: 525 IPR-YIRFVEGFPLTVTGKVQKYRMREQMISEL 556
>gi|325964235|ref|YP_004242141.1| acyl-CoA synthetase [Arthrobacter phenanthrenivorans Sphe3]
gi|323470322|gb|ADX74007.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Arthrobacter
phenanthrenivorans Sphe3]
Length = 558
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 175/397 (44%), Gaps = 47/397 (11%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
+P + + +TSGTTG PKG ++H ++ + ++ Y E D + P H G+
Sbjct: 199 SPHDPINLQYTSGTTGFPKGATLTHRNILNNGFSIGELLRYTEHDRVVIPVPFYHCFGMV 258
Query: 123 SAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 180
+ IP F +ALEAV+ TSL VP + +A L
Sbjct: 259 IGNLNALSHGAATIIPGRGFNPAAALEAVQDFGGTSLYGVPTMF--IAELALPDFASYDL 316
Query: 181 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 240
+++ + G P E+M + + YGMTETS T MT + TL +
Sbjct: 317 STLRTGVMAGSPCPVEVMNRVISEMNMKDVAICYGMTETSPVST-MTRHGDTLRQRTE-- 373
Query: 241 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 294
VG+ PH+E KV S V G + TRG VM YW+
Sbjct: 374 -----------------TVGRAMPHLESKVVDPASGEVLERGQIGELCTRGYAVMAGYWN 416
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
Q + W+ TGD+ +D G V + GR + GGEN+YP E+E L HP
Sbjct: 417 QPDKTIEAIDPDGWMHTGDLARMDGDGYVVIEGRIKDMVIRGGENIYPREIEEFLYTHPS 476
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ + V+G+ +A E ++AC+ L+ + DQ++ + CR K L
Sbjct: 477 VQDVQVIGVPDATYGEELMACIILKPGAE----PLDQAA-----------VAGFCRGK-L 520
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+K PR +V R FP+T +GKIR+ E+R + ++ L
Sbjct: 521 AHYKIPR-YVEVRDSFPMTVSGKIRKVEMREQAVARL 556
>gi|256372142|ref|YP_003109966.1| AMP-dependent synthetase and ligase [Acidimicrobium ferrooxidans
DSM 10331]
gi|256008726|gb|ACU54293.1| AMP-dependent synthetase and ligase [Acidimicrobium ferrooxidans
DSM 10331]
Length = 502
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 178/382 (46%), Gaps = 49/382 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +T GTTG KGV+++H LI ++ + DD +L AP+ H G +
Sbjct: 150 LFYTGGTTGRSKGVMLTHRNLIANAVTALEWTRMRADDRWLVMAPMFHAAGTCCVLTCCW 209
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKIL 187
VGA +P F++ SAL+ +EQ T + VP ++ + L + + RD S++ +
Sbjct: 210 VGASQAMLPSFDAASALDLIEQTRATGTLAVPTMLNAMNDL----QATEPRDVSSLRLLS 265
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSS-SLTF----MTLYDPTLETPGQLPQA 242
+G P E++K A FP+A+L+ YG TET+ + TF + L D + GQ A
Sbjct: 266 HGASPAPLEILKRAHVLFPQAELLHLYGTTETAPIATTFAHEELHLDDRLAGSAGQ--PA 323
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSV 302
FG VT ++ P G+P P E +G I RG +VM YW Q + +
Sbjct: 324 FG-VTVVAL-DPD----GRPVPPGE----------IGEIAVRGNNVMAGYW-QLPDQSAE 366
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ W TGD+G + D G ++LV R + +GGENVY EVE L +HP + V G
Sbjct: 367 ALRGGWYHTGDLGFLTDDGYLFLVDRLKDMVVTGGENVYTVEVEDALYRHPAVAEAAVFG 426
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
I + R E V A V R ++ + LR + R + +K P+
Sbjct: 427 IPDERWGEAVYAVVVPRSP------------------VTEDELRSYLRTL-IASYKVPKR 467
Query: 423 FVLWRKPFPLTSTGKIRRDEVR 444
P P + GKI + +R
Sbjct: 468 IQFQSDPLPKSGAGKILKRTLR 489
>gi|433802354|gb|AGB51436.1| putative long-chain-fatty-acid-CoA ligase [Nocardia nova]
Length = 524
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 195/437 (44%), Gaps = 58/437 (13%)
Query: 22 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 81
L+ V +G ++ D V D A+ + + + +P + +I +TSGTTGSPK
Sbjct: 136 QLKTCVVIGGTTGDGVIGYDDFLAETGEPHVPQDIP------EDTPALIMYTSGTTGSPK 189
Query: 82 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--K 139
G ++S++ L Q+L I + D + T+PL HI GL S M+G+ V P
Sbjct: 190 GAILSYANLNSQALTCIRAMNSTPDTIAFCTSPLFHIAGLGSLAPAFMLGSKTVLHPLGA 249
Query: 140 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE-LM 198
F + L+A+E T+ VPA +I T K R + L+ G SE ++
Sbjct: 250 FNATEFLDAIEAEQATTAFCVPAQW----QVICEDPTVKTRKLALETLSWGAAPASETVL 305
Query: 199 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 258
+ FP A+ ++ +G TE S + D L G
Sbjct: 306 RAMAECFPDAQNVAVFGQTEMSPITCVLEGKD-ALRKLGS-------------------- 344
Query: 259 VGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 313
VG+P P ++ +V D +G I+ RG +M YW++ A G W +GD
Sbjct: 345 VGQPIPTIQTRVVDDEMNDVAPGEIGEIVYRGPTMMQGYWNKPEATAEAFAGG-WFHSGD 403
Query: 314 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 373
+ D+ G VW+V R+ I SGGEN+Y EVE VL HP I VVG A+ + E+ V
Sbjct: 404 LVRQDEEGFVWVVDRKKDMIISGGENIYCAEVENVLFAHPKIHEAAVVGRAHEKWGEVPV 463
Query: 374 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 433
A V L E L+ E L + E NL +K P+ V+ + P
Sbjct: 464 AVVALLEGET----------------LTLEELSEFLNE-NLARYKHPKDLVIVPE-LPRN 505
Query: 434 STGKIRRDEVRREVMSH 450
++GK+ + ++R+E +
Sbjct: 506 ASGKVVKVQLRKEYADY 522
>gi|431802842|ref|YP_007229745.1| acyl-CoA synthetase [Pseudomonas putida HB3267]
gi|430793607|gb|AGA73802.1| acyl-CoA synthetase [Pseudomonas putida HB3267]
Length = 557
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 173/382 (45%), Gaps = 47/382 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG +SHS ++ +G E D + PL H G+ A M
Sbjct: 206 IQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHDRLVVPVPLYHCFGMVMANLGCM 265
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ P F+ + L AV + T+L VP + +A L ++ S++ +
Sbjct: 266 THGSTLIYPNDAFDPLATLRAVAEEKATALYGVPTMF--IAELDHPQRDEFDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+M+ A++ AYGMTETS ++ T LE VT
Sbjct: 324 MAGATCPIEVMRRVIGEMHMAEVQIAYGMTETSP-VSLQTGASDDLER---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ P +E KV +DG++ +G + TRG VML YW+ A
Sbjct: 374 ----------SVGRTQPRLENKVIDADGNTLPRGEIGELCTRGYSVMLGYWNNPKATAES 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
E W+ TGD+ +D+ G V +VGR I GGEN+YP E+E HP + + V+G
Sbjct: 424 IDEEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ ++ E +VA VRL S+E LR + + + FK PR
Sbjct: 484 VPCSKYGEEIVAWVRLHPGHT----------------ASAEELRDWAKAR-IAHFKVPRY 526
Query: 423 FVLWRKPFPLTSTGKIRRDEVR 444
F + FP+T TGK+++ +R
Sbjct: 527 FRFVDE-FPMTVTGKVQKFRMR 547
>gi|297566016|ref|YP_003684988.1| AMP-dependent synthetase and ligase [Meiothermus silvanus DSM 9946]
gi|296850465|gb|ADH63480.1| AMP-dependent synthetase and ligase [Meiothermus silvanus DSM 9946]
Length = 559
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 192/422 (45%), Gaps = 68/422 (16%)
Query: 47 ILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA------- 99
+L+ YS + P + P+ ++ +T GTTG KG +++H L+ + IA
Sbjct: 187 LLRSYSPIAEPVNSN--PDDIALLQYTGGTTGISKGAMLTHRNLVANTYQSIAWSPESKA 244
Query: 100 IVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLI 158
+ G G V L P H+ G++ AM L +G V +P+ E + +EA+E+H VT
Sbjct: 245 LEGKG---VMLGAIPFFHVYGMTVAMNFGLALGYKIVLLPRPEVAACVEAIEKHGVTHFP 301
Query: 159 TVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTE 218
VP + ++ + +++ +G LP E+M E K++ YG+TE
Sbjct: 302 GVPTLYTAFNHFPGIQN--RKIHTIRVCNSGSAPLPLEVM-ERFEQLTGGKVLEGYGLTE 358
Query: 219 TSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG---- 274
+ P N P S + +G VG P P V+ K+
Sbjct: 359 AA-------------------PVTHSN--PVSGLRKKG-SVGLPFPGVDAKILGPDMQEL 396
Query: 275 -SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRN 330
VG + RG ++M YW+ +P + + WL TGD+ +D+ G ++V R+
Sbjct: 397 PPGEVGELAVRGPNIMKGYWN----RPEETAKTLVIDWLLTGDMAKMDEDGYFYIVDRKK 452
Query: 331 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 390
I +GG N+YP EVE VL HP I VVG+ ++ E V A V L+ +E+
Sbjct: 453 DVIIAGGYNIYPREVEEVLYAHPAIQEACVVGVPDSYRGETVAAYVVLKPGANLTEAE-- 510
Query: 391 QSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 450
L ++CRE NL FK PR+ + +RK P ++ GKI R ++R E +
Sbjct: 511 --------------LEKYCRE-NLAAFKIPRI-IEFRKELPKSAVGKILRRQLREEAIQA 554
Query: 451 LK 452
K
Sbjct: 555 QK 556
>gi|209514969|ref|ZP_03263838.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
gi|209504595|gb|EEA04582.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
Length = 564
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 197/453 (43%), Gaps = 61/453 (13%)
Query: 14 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIIC-- 71
+L+ +P LR + LG +S + + L A LR L A GA + C
Sbjct: 151 QLKSARLPDLRLAIILGGQASAGMLNFEALLAPA-NECDLREL------ATRGATLRCDD 203
Query: 72 -----FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA 126
FTSGTTG+PKG ++H L+ S + D PL H G+
Sbjct: 204 PVNIQFTSGTTGAPKGATLTHRNLLNNSFFVGEAMKLTSQDRLCIPVPLYHCFGMVLGNL 263
Query: 127 MLMVGACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
+ + +P F++K+ LE VE T+L VP + +A L + G +++
Sbjct: 264 VCATHGATMVLPGEAFDAKAVLETVEAEKCTALHGVPTMF--IALLSHPEFGRYGLGTLR 321
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ G P E+MK ++ AYGMTET+ ++F + D P +
Sbjct: 322 TGIMAGSPCPVEVMKRVMERMNMQQVTIAYGMTETAP-ISFQSALDD--------PPEYR 372
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 299
T VG+ PH+E+K+ + V G +LTRG VM YW+
Sbjct: 373 VST-----------VGRVQPHLEVKIVDEWGRTVLRGAMGELLTRGYSVMCGYWNDPEKT 421
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
E W+ TGD+ +ID+ G +VGR I GGEN+ P +VE L ++ I +
Sbjct: 422 SEAIDQEGWMHTGDLATIDEDGYCRIVGRSKDLIIRGGENICPRDVEEFLYRYSKIQDVQ 481
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VG+ + + E + AC+ LR +E +R CR + + +K
Sbjct: 482 CVGVPDPKYGEELCACIILRPGAA----------------ADAEEIRSFCRGR-IAHYKI 524
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
PR +V + FP+T TGKI++ +R+++ K
Sbjct: 525 PR-YVAFLDRFPMTVTGKIQKFVLRKQMTEAFK 556
>gi|296134001|ref|YP_003641248.1| AMP-dependent synthetase and ligase [Thermincola potens JR]
gi|296032579|gb|ADG83347.1| AMP-dependent synthetase and ligase [Thermincola potens JR]
Length = 562
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 180/393 (45%), Gaps = 47/393 (11%)
Query: 60 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-I 118
S P+ + + +TSGTTG PKGV+++H ++ ++A + + D PL H
Sbjct: 193 RSLDPDDVINMQYTSGTTGFPKGVMLTHKNIVNNAIAVADCMNFSHKDRLCIPVPLFHCF 252
Query: 119 GGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
G + M ++ GA V + + L+ +E+ T++ VP + L K
Sbjct: 253 GCVLGTMTCVVSGATMVPLVSYNPVQVLQTIEKERCTAVHGVPTMFIAELNLPNFDKY-- 310
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
S++ + G P E MK+ ++ YG TE S ++T + DP
Sbjct: 311 DLSSLRTGIMAGSPCPIETMKQVMERMGMKEVTITYGQTEASPAITMTRVDDPI------ 364
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRY 292
+ + VG+ P VE+K+ + + G + RG +VM Y
Sbjct: 365 --------------ELRVTTVGRSIPGVEVKIVNPETGEEVPRGVQGELCARGYNVMKGY 410
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
+ A + + WL TGD+ +D+ G + GR I GGEN+YP E+E L H
Sbjct: 411 YKMPEATHAAIDEDGWLHTGDLAVMDENGYCKITGRVKDMIIRGGENIYPREIEEFLYTH 470
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P I+ + VVG+ + + E V+A +RLRE + +E E +R+ C+ +
Sbjct: 471 PKILDVQVVGVPDVKYGEEVMAWIRLREGVEMTE----------------EEVREFCKGR 514
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
+ +K PR ++ + + FP+T++GKI++ ++R
Sbjct: 515 -IAQYKHPR-YIKFVEEFPMTASGKIQKYKLRE 545
>gi|333368094|ref|ZP_08460313.1| long-chain-fatty-acid-CoA ligase [Psychrobacter sp. 1501(2011)]
gi|332977877|gb|EGK14627.1| long-chain-fatty-acid-CoA ligase [Psychrobacter sp. 1501(2011)]
Length = 579
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 179/386 (46%), Gaps = 51/386 (13%)
Query: 67 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAM 125
A+ I FTSGTTG+PKG ++H L+ + + +D PL H + +
Sbjct: 224 AINIQFTSGTTGTPKGATLTHRNLLNNAYHLAESLCLSSEDKLCLPLPLYHCFAMVLGNL 283
Query: 126 AMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
ML +G V+ FE + L+A+ T L VP++ LA L + + S++
Sbjct: 284 TMLSIGGTVVYPSTSFEPLTVLQAISDERCTLLHGVPSMF--LAMLNHPEFSTFDLSSLR 341
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
L+GG PSELM+ N +L AYGMTETS T
Sbjct: 342 GGLSGGASCPSELMQRVINDMHMKELSIAYGMTETSPKST-------------------- 381
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYW-DQFL 297
P + + + VG PH+E+K+ + VG +LT+G VM YW D+
Sbjct: 382 QTLPTTEFKKRISTVGVVQPHLEVKIVDTETGETLPIGEVGEVLTKGYAVMQGYWNDKVK 441
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+V G W+ TGD+GS+++ G + +VGR I GGEN+YP EVE L +HP I
Sbjct: 442 TDEAVVDG--WMHTGDLGSMNEQGYISIVGRSKDMIIRGGENIYPIEVENFLYRHPKISD 499
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ +VG+ + + E++ A + R +E +R C + + F
Sbjct: 500 VQIVGVPDKQYGEVLAAWIIPRAGETITEQE----------------IRDFCYNQ-IAHF 542
Query: 418 KAPRLFVLWRKPFPLTSTGKIRRDEV 443
K P ++ + + +P+T TGKI++ ++
Sbjct: 543 KIPT-YIRFVEQYPMTVTGKIQKFKI 567
>gi|319950960|ref|ZP_08024832.1| AMP-binding domain protein [Dietzia cinnamea P4]
gi|319435382|gb|EFV90630.1| AMP-binding domain protein [Dietzia cinnamea P4]
Length = 549
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 175/390 (44%), Gaps = 47/390 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAML 128
I +TSGTTG PKG +SHS ++ ++ Y E D P H G + +A
Sbjct: 196 IQYTSGTTGFPKGATLSHSNILNNGYFVGELINYSEVDRVCIPVPFYHCFGMVMGNLACT 255
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
G+C V P F+ ++L+AVEQ TSL VP + +A L +++ +
Sbjct: 256 THGSCMVIPAPAFDPVASLKAVEQEKCTSLYGVPTMF--IAELALEDFDSYDLSTLRTGI 313
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P M++ + ++ YGMTETS T T D +L+
Sbjct: 314 MAGSPCPEATMRQVIDRMNMEEVSICYGMTETSPVST-QTRADDSLDR------------ 360
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 301
+ VG+ PH+E+K+ + G TRG VML YW+Q
Sbjct: 361 -------RVATVGRVGPHLEIKIIDPSTGETLPRGEAGEFCTRGYSVMLGYWEQPDKTAE 413
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W+ TGDIG +D G V + GR + GGEN+YP EVE L HP I+ V+
Sbjct: 414 AIDEAGWMHTGDIGEMDADGYVKITGRIKDMVIRGGENIYPREVEEFLYTHPDILDAQVI 473
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E ++A VRL+ ++ L + EV R+ K L K P+
Sbjct: 474 GVPDPKYGEELMAWVRLK--------------PGRDDLTADEV-REFATGK-LARHKIPK 517
Query: 422 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
+V FP+T TGK+R+ ++R+ + L
Sbjct: 518 -YVHVVDEFPMTVTGKVRKVDMRKTAVEIL 546
>gi|226182977|dbj|BAH31081.1| putative fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
Length = 529
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 185/396 (46%), Gaps = 56/396 (14%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGED--DVYLHTAPLCHIGGL 121
P +I +TSGTTG PKG ++H +++ +L+ + + YL T PL H G
Sbjct: 171 PTDTAVILYTSGTTGKPKGAELTHCNMVLNALSTNRLFESAPSMHERYLLTLPLFHSFGQ 230
Query: 122 SSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIM-ADLATLIRVKKTWKG 179
+ M A + VGA V +P+F++ +ALE + + ++ VP + L L V K+
Sbjct: 231 TVTMNAGICVGATLVLMPRFDATAALEIMGREKISVFAGVPTMYWGLLGVLEEVVKSGVD 290
Query: 180 RDSVKK----ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
++V + ++GG LP E++ + F +++ YG++ETS F DP
Sbjct: 291 VETVAQNMRCAISGGAALPVEILTQFRERF-GVQILEGYGLSETSPLALFS---DPE--- 343
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVM 289
P+ +G P VE ++ D G VG + RG +VM
Sbjct: 344 ----------------SDPRPGSIGVPIWGVEARLVDDSWRTITGPDEVGELAIRGHNVM 387
Query: 290 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
Y+++ A V + W TGD+ +D GN ++V R I GG NVYP E+E VL
Sbjct: 388 KGYFNRPEATAEVMC-DGWFRTGDLARVDTDGNYYIVDRAKDMIVRGGFNVYPREIEEVL 446
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
L HP + + VVG+ + L E VVA V S + SES+ + S+ +
Sbjct: 447 LTHPAVSLVAVVGVPDTSLGEEVVAFVIREPSEEISESDLVEWSREQ------------- 493
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 445
+ +K PR + + P+T+TGKI + E+ +
Sbjct: 494 ----MAAYKYPRR-IEFVPSLPMTATGKILKRELNQ 524
>gi|186477771|ref|YP_001859241.1| AMP-binding domain-containing protein [Burkholderia phymatum
STM815]
gi|184194230|gb|ACC72195.1| AMP-dependent synthetase and ligase [Burkholderia phymatum STM815]
Length = 576
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 185/402 (46%), Gaps = 62/402 (15%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P + I FTSGTTG+PKG ++H ++ + + E+D PL H G+
Sbjct: 215 PNDPINIQFTSGTTGNPKGATLTHRNVVNNARYIAMAMRLTEEDSLCIPVPLYHCFGMVL 274
Query: 124 A-MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIM------ADLATLIRVKK 175
A +A + VGA VF + FE + L AV + T+L VP + D AT +
Sbjct: 275 AVLACVSVGAAMVFPGEAFEPGATLRAVSEEKCTALHGVPTMFIAELDHPDFATFDLTR- 333
Query: 176 TWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 235
++ + G P E MK + A++ AYGMTETS
Sbjct: 334 -------LRTGIMAGSPCPIETMKRVVSQMHLAEITIAYGMTETS--------------- 371
Query: 236 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVML 290
P +F + T + + + + VG+ PH+E+K+ V G + TRG VM
Sbjct: 372 ----PVSFQSSTTDPLDK-RTTTVGRIQPHLEVKIIDPLGDIVPVGETGELCTRGYSVMK 426
Query: 291 RYW-DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 349
YW D+ + S+ G W+ TGD+ +ID G +VGR + GGEN+YP E+E L
Sbjct: 427 GYWGDEAKTQESIVDG--WMHTGDLATIDADGYCNIVGRLKDMLIRGGENIYPREIEEFL 484
Query: 350 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 409
+HP I V G+ +A+ E V A V LR + L++E L++ C
Sbjct: 485 FRHPKIQSAQVFGVPDAKYGEEVCAWVVLRSGER----------------LTAEDLQEFC 528
Query: 410 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
R + +K P+ ++ + P+T TGK+++ +R ++ L
Sbjct: 529 R-GQIAHYKIPK-YIRFVDELPMTVTGKVQKFVMRERMIDEL 568
>gi|410980755|ref|XP_003996741.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Felis catus]
Length = 615
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 190/395 (48%), Gaps = 54/395 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVG--------YGEDDVYLHTAPLCH-IGG 120
I FTSGTTGSPKG +SH ++ S ++G ED + +PL H +G
Sbjct: 260 IQFTSGTTGSPKGATLSHYNIVNNS----NMIGDRLRLHLKTSEDLRIILPSPLYHCLGS 315
Query: 121 LSSAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
+ M LM GA + P F+ K ALEA+ + T L P + D+ + +
Sbjct: 316 VGGTMVSLMYGATLILPCPTFDGKKALEAISKERGTILYGTPTMFVDILN----QPDFSS 371
Query: 180 RDSVKKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 236
D + + G G P EL++ + +L+ AYG TE +S +TFM + T+E
Sbjct: 372 YD-ISSMCGGVIAGSPAPPELIRAIIDKLNMKELVVAYGTTE-NSPVTFMNFAEDTVE-- 427
Query: 237 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQF 296
Q ++ G + P++ Q + G A EL G + RG VML YW +
Sbjct: 428 -QKAESVGRIMPHTEAQIVDMKTGTLA---ELNTS-------GELCIRGYCVMLGYWGEP 476
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
+ W TGDI +D+ G +VGR I GGEN+YP E+E HP +
Sbjct: 477 QKTEEAIGQDKWYHTGDIAVMDNQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQ 536
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ VVG+ + R+ E + AC+RL++ + ++E ++ C+ K ++
Sbjct: 537 EVQVVGVKDDRMGEEICACIRLKKGEK----------------TTAEEIKAFCKGK-ISH 579
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
FK PR +V++ +PLT +GKI++ ++R+++ HL
Sbjct: 580 FKIPR-YVVFVTNYPLTVSGKIQKFKLRQQMEQHL 613
>gi|385677512|ref|ZP_10051440.1| AMP-dependent synthetase and ligase [Amycolatopsis sp. ATCC 39116]
Length = 549
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 183/396 (46%), Gaps = 46/396 (11%)
Query: 57 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHS---ALIVQSLAKIAIVGYGEDDVYLHTA 113
P+T E A I+ +TSGTTG PKG +SH+ A++ L ++ +DD+ LH A
Sbjct: 179 PYTRPLPHEPAAIL-YTSGTTGMPKGATLSHANWAAMVRNELLELPPAR--DDDLVLHVA 235
Query: 114 PLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV 173
PL H+ G A + + GA H+ KF++ LE VE+H VT L VP M +L L
Sbjct: 236 PLSHLSGYV-APSYFVRGATHLTCAKFDATETLELVERHGVTILPMVPT-MLNLLVLAAE 293
Query: 174 KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 233
++T S+ ++ G + + + A F I YG++E + ++ D +
Sbjct: 294 QRTGD-YGSLHTVVYAGSPIAPDRLARARQVFGDV-FIQFYGLSELPIPIACLSRQDHSF 351
Query: 234 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHV 288
+ +P + G+ +P VE+K+ D + V G I RG
Sbjct: 352 DPASGIPARLASA-------------GRISPFVEVKLVDDAGAEVPHGEVGEITVRGDQT 398
Query: 289 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 348
M+ YW A + E W TGD+G D+ G +++V R+ + +GG NVYP E+E V
Sbjct: 399 MMGYWHLPGATADMVDAEGWASTGDLGRFDEDGYLYIVDRKKDMVVTGGFNVYPTEIENV 458
Query: 349 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 408
+ P + + V+G+ + E + A V +R+ + L+ E +
Sbjct: 459 VSTLPAVSEVAVIGVPDPVWGEALKAVVVVRDGYS----------------LTPEEVVAV 502
Query: 409 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
C NL +K PR V + P T +GKI R ++R
Sbjct: 503 C-SANLASYKKPR-SVEFVTELPKTGSGKIMRRQLR 536
>gi|126438681|ref|YP_001060959.1| AMP-binding protein [Burkholderia pseudomallei 668]
gi|126218174|gb|ABN81680.1| AMP-binding domain protein [Burkholderia pseudomallei 668]
Length = 576
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 200/440 (45%), Gaps = 49/440 (11%)
Query: 20 IPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 78
+PSLR V++ ++ + ++ D+L S R + + I FTSGTTG
Sbjct: 170 VPSLRTVVTMSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTG 229
Query: 79 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 137
SPKG ++H ++ + + ++ E D PL H G+ S +A + GA VF
Sbjct: 230 SPKGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFP 289
Query: 138 -PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 196
FE + L AV T+L VP + +A L +++ + G P E
Sbjct: 290 GAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIE 347
Query: 197 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 256
MK +++ AYGMTETS P +F + T +S+ + +
Sbjct: 348 TMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RT 387
Query: 257 VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 311
VG+ PH+E K+ + V G + TRG VML YWD A+ + + W+ T
Sbjct: 388 TTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRT 446
Query: 312 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 371
GD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++ E
Sbjct: 447 GDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEE 506
Query: 372 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 431
V A + LR ++ + LR+ C + +K PR +V + P
Sbjct: 507 VCAWIVLRAGET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELP 548
Query: 432 LTSTGKIRRDEVRREVMSHL 451
+T TGK+++ +R ++ L
Sbjct: 549 MTVTGKVQKFVMRERMIDGL 568
>gi|452961748|gb|EME67047.1| AMP-dependent synthetase and ligase [Rhodococcus ruber BKS 20-38]
Length = 495
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 186/389 (47%), Gaps = 54/389 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
I+ FTSGTT +PKGV++ H L+ L + GE+ L + P HI GL + ++ +
Sbjct: 144 IVLFTSGTTSAPKGVLLRHRHLLSYLLNTVEFGSAGEEQATLVSTPPYHIAGLGAVLSNI 203
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG----RDSVK 184
G V +P F ++ L+ V + V+S + VP ++A R+ + G S+
Sbjct: 204 YAGRRMVHLPDFSPRAWLDLVREEEVSSAMVVPTMLA------RIVEHLDGAPACTPSLA 257
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM-------TLYDPTLETPG 237
+ GG +P ++++A +FP ++AYG+TETSS++ + +PTL G
Sbjct: 258 SLAYGGARMPQPVLEKALTAFPDTGFVNAYGLTETSSTIAVLGPEDHREAFAEPTLR--G 315
Query: 238 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFL 297
+L A G + P Q + ++ V ++G + G + RGA V +++
Sbjct: 316 RLASA-GRIVPGMQAQIRD--------DDDVTVLAEGET--GLLWVRGAQVS----GEYM 360
Query: 298 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
K SV + W T D I+D G +++ GR + I GGEN+ P E+E VL +H +
Sbjct: 361 GKGSVLDADGWFPTRDRARIED-GFLYIGGRADDTIIRGGENIAPAEIEDVLARHGQVRE 419
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
+ V+G+ + +W E C N E+ ++ R CRE+ L G
Sbjct: 420 VAVIGVPDD----------------EWGERICAVIVPNGEIHDDAQSFRTWCRER-LRGS 462
Query: 418 KAPRLFVLWRKPFPLTSTGK-IRRDEVRR 445
+ P V++ P T TGK +RRD V R
Sbjct: 463 RTPD-DVVFVDELPRTPTGKLVRRDLVDR 490
>gi|295697204|ref|YP_003590442.1| AMP-dependent synthetase and ligase [Kyrpidia tusciae DSM 2912]
gi|295412806|gb|ADG07298.1| AMP-dependent synthetase and ligase [Kyrpidia tusciae DSM 2912]
Length = 525
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 175/392 (44%), Gaps = 49/392 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-ML 128
I +TSGT PKG +++H +LI + ++ I +D +H PL H + +
Sbjct: 175 ILYTSGTESRPKGAMLTHRSLIAEYVSGIIDGELTAEDRIIHALPLFHSAQFHVLLGPQI 234
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+GA V + + +E V + VT L P + L R + S++K
Sbjct: 235 YLGAWGVIVEGAAPELVMETVSRERVTQLFCPPTVWISLLRHPRFDEY--DLSSLQKCYY 292
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G +P E++KE T P A+ +AYG TE + L + + L PG
Sbjct: 293 GAAIMPVEVLKELTRRLPGARFWNAYGQTEVAP-LAMILRPEDQLRKPG----------- 340
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
GKP +VE K+ D V G I+ R H M+ Y++ K + +
Sbjct: 341 ---------AAGKPCINVESKIVDDEGREVPPGTVGEIVHRTPHAMIGYYND-PEKTAAA 390
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W +GD+G +D+ G +V R+ IK+GGENV EVE + QHPG+ + V+G+
Sbjct: 391 FEDGWFHSGDLGVMDEDGYFTVVDRKKDMIKTGGENVASREVEEAIYQHPGVAEVAVIGV 450
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ E V A V + + L+ E L CRE+ L GFK P+ F
Sbjct: 451 PHPYWIEAVTAVVVPKAGSR----------------LTEEELIAFCRER-LAGFKVPK-F 492
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLKSLP 455
V+ + P +GKI + ++ R+V HL P
Sbjct: 493 VVITEALPKNPSGKILKRQL-RDVYQHLGERP 523
>gi|386021952|ref|YP_005939977.1| AMP-binding protein [Pseudomonas stutzeri DSM 4166]
gi|327481925|gb|AEA85235.1| AMP-binding domain protein [Pseudomonas stutzeri DSM 4166]
Length = 560
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 175/382 (45%), Gaps = 47/382 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
I +TSGTTG PKG +SH ++ + E D + PL H G+ +
Sbjct: 206 IQYTSGTTGFPKGATLSHYNILNNGYMVGESLRLTEHDRLVIPVPLYHCFGMVMGNLGCV 265
Query: 130 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
+ P FE +AL+A + T + VP + +A L ++ S++ +
Sbjct: 266 THGTTMIYPSAAFEPLAALQAAAEEKATGMYGVPTMF--IAMLDHPERQSLDLSSLRTGI 323
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK + A++ AYGMTETS T T D LE VT
Sbjct: 324 MAGSTCPIEVMKRVIDDMHLAEMQIAYGMTETSPVST-QTSADDDLER---------RVT 373
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSV 302
VG+ PH+E K+ + + +G + TRG VML YW+ A
Sbjct: 374 ----------SVGRTQPHLESKIVDEHGAVVPRGQIGELCTRGYSVMLGYWNNPDATREA 423
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
G W+ TGD+ +DD G + +VGR I GGENVYP E+E L HP + + V+G
Sbjct: 424 IDGARWMHTGDLAVMDDEGYIKIVGRNKDMIIRGGENVYPREIEEFLFTHPAVADVQVIG 483
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ +++ E +VA V+L Q + +EVLR+ C+ + + FK PR
Sbjct: 484 VPDSKFGEEIVAWVKLHPGHQ----------------VEAEVLREFCKGR-IAHFKTPR- 525
Query: 423 FVLWRKPFPLTSTGKIRRDEVR 444
+ + FP+T +GK+++ +R
Sbjct: 526 HIKFVDDFPMTISGKVQKFRMR 547
>gi|134099948|ref|YP_001105609.1| AMP-dependent Acyl-CoA synthetase and ligase [Saccharopolyspora
erythraea NRRL 2338]
gi|291003059|ref|ZP_06561032.1| AMP-dependent Acyl-CoA synthetase and ligase [Saccharopolyspora
erythraea NRRL 2338]
gi|133912571|emb|CAM02684.1| AMP-dependent Acyl-CoA synthetase and ligase [Saccharopolyspora
erythraea NRRL 2338]
Length = 550
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 182/390 (46%), Gaps = 50/390 (12%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ ++ +TSGTTG PKG + +H L+ + A VG GE DV APL HI G+ +
Sbjct: 200 PDDVAVLTYTSGTTGPPKGAMNTHRNLVFNARAVRDWVGIGESDVVFGVAPLFHITGMVA 259
Query: 124 AMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
A+ L+ A V +FE +A++ + +H T T+ +I +A + + T S
Sbjct: 260 HAALALLTTAPLVLFCRFEPNAAVDLIREHRPT--FTIGSITVFIALMNAPEATSADLSS 317
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
+ ++ +GG +P + F + + YG+TET++ + L+ G+ P
Sbjct: 318 LTRVYSGGAPIPPSTTRAFQERF-GHYIHNIYGLTETTAPTHAVPLH-------GEAP-- 367
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFL 297
V P S + +G P ++ D + +G ++ RG V+ YW+
Sbjct: 368 ---VDPES----GALSIGVPMYSTVARIVGDDGADLPAGRIGEVVVRGPQVVAGYWN--- 417
Query: 298 AKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
KP + G + WL TGD+G +D G +LV R+ +I +GG V+P EVE VL +H
Sbjct: 418 -KPEETAGALPGGWLHTGDVGYMDHVGWFYLVDRKKDQINTGGYKVWPREVEDVLYEHEA 476
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ VVG+ + EMV V LR L S E L CR + +
Sbjct: 477 VREAAVVGVPDEYRGEMVKGFVSLRPG----------------LTASPEELVDFCR-RRM 519
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+K PR + + P T+TGK+ R ++R
Sbjct: 520 AAYKYPRQVEVLEE-LPKTATGKLLRRQLR 548
>gi|187925861|ref|YP_001897503.1| AMP-binding domain-containing protein [Burkholderia phytofirmans
PsJN]
gi|187717055|gb|ACD18279.1| AMP-dependent synthetase and ligase [Burkholderia phytofirmans
PsJN]
Length = 576
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 209/453 (46%), Gaps = 61/453 (13%)
Query: 14 ELQHTAIPSLRWHVSL------GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGA 67
EL +P LR+ + + G + V +R + D+ K ++ + H
Sbjct: 164 ELHAARLPELRYVIRMCDTETPGMLTFSDVIERGRVCLDVAKLDAIGATLSCHE-----P 218
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MA 126
+ I FTSGTTG+PKG ++HS ++ + + E D PL H G+ A +A
Sbjct: 219 INIQFTSGTTGNPKGATLTHSNVVNNARYIAMAMRLSEQDGLCIPVPLYHCFGMVLAVLA 278
Query: 127 MLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ VGA VF + F+ + L AV + T+L VP + +A L ++
Sbjct: 279 CVSVGAKMVFPGEGFDPAATLAAVAEEQCTALHGVPTMF--IAELDHPNFATYDFSRLRT 336
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+ G P E MK+ + +++ AYGMTETS P +F +
Sbjct: 337 GIMAGSPCPIETMKKVVSRMHLSEITIAYGMTETS-------------------PVSFQS 377
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAK 299
T + + + + VG+ PH+E+K+ + V G + TRG VM YW D+ +
Sbjct: 378 STTDPLDK-RTTTVGRIQPHLEVKIVDPLGAIVPVGETGELCTRGYSVMQGYWGDEAKTR 436
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
S+ G W+ TGD+ ++D G +VGR + GGEN+YP E+E L +HP I +
Sbjct: 437 ESIVDG--WMHTGDLATLDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSVQ 494
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
V G+ + + E V A V LR Q +++E ++Q C + +K
Sbjct: 495 VFGVPDTKYGEEVCAWVVLRSGEQ----------------VTAEEIQQFCH-GQIAHYKV 537
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
P+ ++ + P+T TGK+++ +R +++S LK
Sbjct: 538 PK-YIRFVDELPMTVTGKVQKFIMREQMISELK 569
>gi|154150313|ref|YP_001403931.1| AMP-dependent synthetase/ligase [Methanoregula boonei 6A8]
gi|153998865|gb|ABS55288.1| AMP-dependent synthetase and ligase [Methanoregula boonei 6A8]
Length = 566
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 190/428 (44%), Gaps = 59/428 (13%)
Query: 34 SDFVNKRDMLTADIL--KGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI 91
+F+ K D +T D L +G +L + + I +TSGTTG PKGVV++H ++
Sbjct: 177 DEFIKKADDITMDELVERGEALTF---------DDPINIQYTSGTTGFPKGVVLTHHGVL 227
Query: 92 VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVF-IPKFESKSALEAV 149
+G+ E D P H G+ S MA G V P F+++ L+ +
Sbjct: 228 NNGYIIGEGMGFTEKDRLCIPVPFYHCFGMVLSNMASATHGTTMVLPCPTFDAEEVLKTI 287
Query: 150 EQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAK 209
E+ T++ VP + +A L + S++ + G P E+MK+
Sbjct: 288 EKERCTAVHGVPTMF--IAELSHPNFSKYNLSSLRTGIMAGSPCPIEVMKQVNTKMNMRD 345
Query: 210 LISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK 269
++ YG TETS +T T DP + + +G+ PH ELK
Sbjct: 346 IVIVYGQTETSPGVTMTTTKDPL--------------------ERRVTTIGRAFPHTELK 385
Query: 270 VCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNV 323
+ + VG I RG VM Y++ A + + W TGD+ ++D+ G
Sbjct: 386 IIDPKTGKIVPMGEVGEICARGYCVMKCYYNNPAATHATLDKDHWNHTGDLATMDEEGYF 445
Query: 324 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 383
+VGR + GGEN+YP E+E L H + + VVG+ + + E + A V+++
Sbjct: 446 KVVGRLKDMVIRGGENIYPREIEEFLHHHEKVSDVYVVGVPDIKYGEELCAWVKVKAGQA 505
Query: 384 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 443
+E +++ C+ K + FK PR +VL+ FP++ TGKI++ +
Sbjct: 506 LTEDE----------------VKEFCKGK-IAHFKIPR-YVLFVDDFPMSVTGKIQKFVM 547
Query: 444 RREVMSHL 451
R E + L
Sbjct: 548 REESIKRL 555
>gi|402569814|ref|YP_006619158.1| AMP-binding domain-containing protein [Burkholderia cepacia GG4]
gi|402251011|gb|AFQ51464.1| AMP-binding domain-containing protein [Burkholderia cepacia GG4]
Length = 572
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 204/446 (45%), Gaps = 53/446 (11%)
Query: 14 ELQHTAIPSLRWHVSLGSS-SSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVII 70
EL +PSLR VS+G + D++ D L L ++ T A + I
Sbjct: 160 ELHAARLPSLRTVVSMGEVVPAGMFRFADVMARGRDTLDVARLDAIGAT--LAATDPINI 217
Query: 71 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLM 129
FTSGTTGSPKG ++H ++ + + + E D PL H G+ A +A +
Sbjct: 218 QFTSGTTGSPKGATLTHRNVVNNARFIAMAMCFTEQDSLCIPVPLYHCFGMVLAVLACVS 277
Query: 130 VGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
GA VF + F+ + L AV T+L VP + +A L + +++ +
Sbjct: 278 TGAAMVFPGEAFDPVATLAAVADERCTALHGVPTMF--IAELDHPEFATFDLSTLRTGIM 335
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G P E MK + +++ AYGMTETS P +F + T
Sbjct: 336 AGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSFQSSTD 376
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
+ + + + VG+ PH+E+K+ V G + T+G VM YWD AK +
Sbjct: 377 DPLEK-RTTTVGRVQPHLEVKIVDPNGDVVPVGATGELCTKGYSVMPGYWDDD-AKTQET 434
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W+ TGD+ ++D G +VGR + GGEN+YP E+E L +HP I + V G+
Sbjct: 435 IVDGWMHTGDLATLDADGYCNIVGRLKDMVIRGGENIYPREIEEFLFRHPKIQSVQVFGV 494
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+A+ E + A + LR Q SE + +R C + + +K P+ +
Sbjct: 495 PDAKYGEELCAWIVLRTDEQMSEDD----------------VRAFCHGQ-IAHYKIPK-Y 536
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMS 449
V + P+T TGK+++ +R++++
Sbjct: 537 VCFVDELPMTVTGKVQKFVMRQQMID 562
>gi|300776376|ref|ZP_07086234.1| AMP-binding enzyme [Chryseobacterium gleum ATCC 35910]
gi|300501886|gb|EFK33026.1| AMP-binding enzyme [Chryseobacterium gleum ATCC 35910]
Length = 541
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 199/452 (44%), Gaps = 66/452 (14%)
Query: 13 LELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 72
+E PSL + + FVN ++ ++L F + V I +
Sbjct: 135 VEYAKEVCPSLEHEIFFDENWEHFVNNGQEISDEVLHS-------FEEHVQFDDPVNIQY 187
Query: 73 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVG 131
TSGTTG PKGV +SH ++ + Y E D P H G+ + G
Sbjct: 188 TSGTTGFPKGVTLSHHNILNNGYFIGIRLKYTEKDRVCIPVPFYHCFGMVIGNICCTAHG 247
Query: 132 ACHVFIPK--FESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKI 186
AC V IP F+ + L+AV + TSL VP + +A+LA K + D S++
Sbjct: 248 ACMV-IPNDSFDPEITLKAVSEEKCTSLYGVPTMFIAELAV-----KDFDSYDFSSLRTG 301
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
+ G P E+MK+ N ++ YGMTETS T TL LE
Sbjct: 302 VMAGSVCPPEIMKKVENLMNIKEMSICYGMTETSPVST-QTLIGTPLE------------ 348
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPS 301
Q VG H+E+K+ + + G + TRG VML+YW+
Sbjct: 349 -------KQVSTVGTVQDHLEIKIIDENGRTLKRGEHGELCTRGYSVMLKYWNDPENTKK 401
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
V W+ TGD+ +D G + + GR I GGEN+ P+E+E L + I+ + ++
Sbjct: 402 VLDDARWMHTGDMAVMDKDGYITISGRIKDLIIRGGENISPKEIEDFLYTYTNILDVQII 461
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + + E V+A V++R K +++E L+++C+ + + +K P+
Sbjct: 462 GVPSEKFGEEVMAWVKVR----------------KGFTITAEELQEYCKGR-IAHYKVPK 504
Query: 422 LFVLWR--KPFPLTSTGKIRRDEVRREVMSHL 451
W+ FP+T +GKIR+ E+R M L
Sbjct: 505 ---YWKFVDEFPMTISGKIRKVEMREISMREL 533
>gi|384176668|ref|YP_005558053.1| 2-succinylbenzoate--CoA ligase [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|349595892|gb|AEP92079.1| 2-succinylbenzoate--CoA ligase [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
Length = 486
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 189/388 (48%), Gaps = 61/388 (15%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
+ + +TSGTTG PKGV + +++ +G E D +L PL HI GLS+
Sbjct: 144 DATATLMYTSGTTGKPKGVQQTFGNHYFSAVSSALNLGITEQDRWLIALPLFHISGLSAL 203
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
++ G V +F L+++ +H VT + V ++A L +++T + +S++
Sbjct: 204 FKSVIYGMTVVLHQRFSVSDVLDSINRHEVTMISAVQTMLASL-----LEETNRCPESIR 258
Query: 185 KILNGGGGLPSELMKEATNS-FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
IL GGG P L++E FP + +YGMTET S +
Sbjct: 259 CILLGGGPAPLPLLEECREKGFP---VFQSYGMTETCSQIV------------------- 296
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLA 298
++P + G GKP E+K+ DG H G I+ +G +VM Y+++ A
Sbjct: 297 -TLSPEFSMEKLG-SAGKPLFSCEIKIERDGQVCEPFEH-GEIMVKGPNVMKSYFNRESA 353
Query: 299 -KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 357
+ S G WL TGD+G +D+ G ++++ RR+ I SGGEN+YP EVE+VLL HP +
Sbjct: 354 NEASFQNG--WLKTGDLGYLDNEGFLYVLDRRSDLIISGGENIYPAEVESVLLSHPAVAE 411
Query: 358 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 417
V G + + ++ A + L + +S+E L +C+E+ L +
Sbjct: 412 AGVSGAEDKKWGKVPHAYLVLHKP------------------VSAEELTAYCKER-LAKY 452
Query: 418 KAP-RLFVLWRKPFPLTSTGKIRRDEVR 444
K P + FVL R P ++ K+ R++++
Sbjct: 453 KIPAKFFVLDR--LPRNASNKLLRNQLK 478
>gi|387874232|ref|YP_006304536.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. MOTT36Y]
gi|386787690|gb|AFJ33809.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. MOTT36Y]
Length = 467
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 168/376 (44%), Gaps = 51/376 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-L 128
I FTSGTTG PKG +++H + + E D YL P H GL + +
Sbjct: 142 IIFTSGTTGRPKGAMLNHGQTLRMYEEWATLADLREGDRYLQINPYFHTFGLKAGLVTSF 201
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+ GA + + F+ + +E +++ +T L P + L + K +++ +
Sbjct: 202 LRGATMLPVAVFDIDTVVELIDRERITMLPGPPTLYHSLLGVGDKSKL----STLRAAVT 257
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G +P EL++ P L++ YG+TE + TL PG +F +V
Sbjct: 258 GAADIPVELVRRIHGELPFETLMTGYGLTEAGNV---------TLSRPGD---SFEDVAT 305
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 308
+ G P VE+++ DG ++ RG VM Y D A E W
Sbjct: 306 TA---------GLPCDGVEVRIADDGE-----VVVRGYGVMQGYLDDPAATAQAIDAEGW 351
Query: 309 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 368
L TGD+GS DD G + +VGR+ GG N YP E+E LL HP + V+GI + R+
Sbjct: 352 LHTGDLGSFDDAGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGIPDERM 411
Query: 369 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 428
++ A V + +S++ L CR++ + GFK PR V +
Sbjct: 412 GQVGKAFVVRKGE------------------VSADELIGWCRDR-MAGFKVPRA-VQFLD 451
Query: 429 PFPLTSTGKIRRDEVR 444
PL +TGK+ +D++R
Sbjct: 452 SLPLNATGKVMKDQLR 467
>gi|398305756|ref|ZP_10509342.1| O-succinylbenzoic acid--CoA ligase [Bacillus vallismortis DV1-F-3]
Length = 486
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 184/381 (48%), Gaps = 57/381 (14%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 129
+ +TSGTTG PKGV + +++ +G E D +L PL HI GLS+ ++
Sbjct: 149 LMYTSGTTGKPKGVQQTFGNHYFSAVSSALNLGITEQDRWLIALPLFHISGLSALFKSVI 208
Query: 130 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 189
G V +F L+++ +H VT L V ++A L + +T + +S++ IL G
Sbjct: 209 YGMTVVLHQRFSVSDVLDSINRHQVTMLSAVQTMLASL-----LAETSRCPESIRCILLG 263
Query: 190 GGGLPSELMKEATNS-FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
GG P L++E FP + +YGMTET S + ++P
Sbjct: 264 GGPAPLPLLEECREKGFP---VFQSYGMTETCSQIV--------------------TLSP 300
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVST 304
Q G GKP E+K+ DG + G I+ +G +VM Y+++ A S S
Sbjct: 301 EFSMQKLG-SAGKPLFSCEIKIERDGQACKPFEHGEIMVKGPNVMKSYFNRESANES-SF 358
Query: 305 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 364
WL TGD+G +D G ++++ RR+ I SGGEN+YP EVE+VLL HP + V G
Sbjct: 359 QNGWLKTGDLGYLDSEGFLYVLDRRSDLIISGGENIYPAEVESVLLSHPAVAEAGVSGAE 418
Query: 365 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLF 423
+ + ++ A + L + +S+E L +C+E+ L +K P + F
Sbjct: 419 DKKWGKVPHAFLVLHKP------------------VSAEDLTAYCKER-LAKYKIPVKFF 459
Query: 424 VLWRKPFPLTSTGKIRRDEVR 444
L R P ++ K+ R++++
Sbjct: 460 RLDR--LPRNASNKLLRNQLK 478
>gi|332882818|ref|ZP_08450429.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679320|gb|EGJ52306.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 545
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 194/433 (44%), Gaps = 57/433 (13%)
Query: 22 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 81
+LR V G S F+ + ++ L+ Y + + F + V I +TSGTTG+PK
Sbjct: 149 TLRKEVYWGESWEYFLAQGKKVSDQKLQSYEAK-VQF------DDPVNIQYTSGTTGNPK 201
Query: 82 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK-- 139
GV ++H ++ + + Y + D P H G+ + IP
Sbjct: 202 GVTLTHHNILNNAYFIGVRMNYTDKDRVCIPVPFYHCFGMVIGNLCCTAHGATMVIPNDS 261
Query: 140 FESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 198
F++ LEAVE+ TSL VP + +++L TL R S++ + G P E+M
Sbjct: 262 FDATKTLEAVERERCTSLYGVPTMFISELYTLDRHPYDL---SSLRTGVMAGALCPPEIM 318
Query: 199 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 258
K ++ YGMTETS P G +H
Sbjct: 319 KRVKEQMNMHEITICYGMTETS---------------PVSTQTRIGVPFEKQIHS----- 358
Query: 259 VGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 312
VG H+E+K+ + + + G + TRG VML+YW+ A V + W+ +G
Sbjct: 359 VGTIQDHIEIKIINPETKAIVPRGESGELCTRGYSVMLKYWNSPQATAQVIDEQRWMHSG 418
Query: 313 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 372
D+ +D+ G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V
Sbjct: 419 DLAMMDEDGYIHISGRIKDLIIRGGENISPKEIEDFLYTYEGVMDAQVIGVPSKKFGEEV 478
Query: 373 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 432
+A ++ N+ + L+ E LR C+++ + +K PR + + FP+
Sbjct: 479 MAWIK----------------PNEGVTLTEEELRNFCKDR-IAHYKVPRYWKFVNE-FPM 520
Query: 433 TSTGKIRRDEVRR 445
T +GKIR+ E+R
Sbjct: 521 TISGKIRKVEMRE 533
>gi|355571892|ref|ZP_09043100.1| Long-chain-fatty-acid--CoA ligase [Methanolinea tarda NOBI-1]
gi|354824988|gb|EHF09223.1| Long-chain-fatty-acid--CoA ligase [Methanolinea tarda NOBI-1]
Length = 566
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 182/392 (46%), Gaps = 48/392 (12%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 120
S + + AV I +TSGTTG PKGVV+SH +++ + + E D P H G
Sbjct: 197 SLSFDDAVNIQYTSGTTGFPKGVVLSHHSIVNNGNIIGDGMNFTEKDRLCIPVPFYHCFG 256
Query: 121 LS-SAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK 178
+ S +A + G+ V P F + L+ +E+ T+L VP + +A L +
Sbjct: 257 MVLSNLACMTHGSTMVLPGPTFNAGEVLQCIEKERCTALHGVPTMF--IAELSHPDFSRY 314
Query: 179 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 238
++++ + G P E+MKE ++++ YG TET+ +T T DP
Sbjct: 315 SMETLRTGIMAGSPCPIEVMKEVNRKMHMSEIVIVYGQTETAPGITMTTTRDPL------ 368
Query: 239 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRY 292
+ + VG+ PH E+K+ + VG I RG VM Y
Sbjct: 369 --------------ERRVSTVGRVFPHTEIKIIDPKTGRIVPRGEVGEICARGYCVMKCY 414
Query: 293 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 352
++ A + + W TGD+G++D G V +VGR + GGEN+YP E+E L H
Sbjct: 415 YNNPSATHATLDADRWNHTGDLGTMDAEGYVKIVGRLKDMVIRGGENIYPREIEEFLHNH 474
Query: 353 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 412
P I + V+G+ + + E ++A W E K ++ E +R+ CR K
Sbjct: 475 PKIADVYVIGVPDEKYGEELMA-------WIMVE---------KGETMTGEEVREFCRGK 518
Query: 413 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
+ +K PR +V + FP+ +GKI++ ++R
Sbjct: 519 -IAHYKIPR-YVKFVTEFPMNISGKIQKYKMR 548
>gi|219119754|ref|XP_002180630.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408103|gb|EEC48038.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 568
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 136/420 (32%), Positives = 193/420 (45%), Gaps = 71/420 (16%)
Query: 43 LTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI-V 101
L A IL+ L LP +H A +I FTSGTT PKGV +SH AL++Q+LAK+
Sbjct: 177 LNACILE---LSRLPLSHDDA-----LIVFTSGTTSGPKGVRLSHRALVMQALAKLQPPC 228
Query: 102 GYGEDDVYLHTA-PLCHIGGLSSAMAMLMVGACHVF------IPKFESKSALEAVEQHCV 154
Y V L T P H+GGLSS +A+ + G +F KF+ L+++ H +
Sbjct: 229 RYSSKTVMLATTVPFFHVGGLSSILAVWLAGGTLIFPGAPGMSSKFDPSRLLDSL-SHAL 287
Query: 155 TS--LITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLIS 212
S L+ VPA++ + ++ +T+ V IL GG + + T ++P A+++
Sbjct: 288 PSNTLVMVPAMIFAVQKEMQPGETFP---YVDLILIGGQSASNTTIDFLTETYPNARVVQ 344
Query: 213 AYGMTETSSSLTFMTLYDPTLETP---GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK 269
Y TE +SS+TF +D T E LP A G CVG HV +
Sbjct: 345 TYACTEAASSMTF---FDVTAERSCLVQSLPLA-------------GDCVGVTPRHVRIS 388
Query: 270 VCS----------DGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 319
+ + S G I T GAHVM YW + P V E W T D+G D+
Sbjct: 389 IFDATKQPSLEAVEESYTPGIIGTAGAHVMNGYWRRGGLNP-VRRFEEWYLTNDLGFWDE 447
Query: 320 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 379
++ GR N I++GGE V EVE +L HP ++ V + + R E V C L
Sbjct: 448 ENRLYFCGRANDVIRTGGETVLASEVERILAMHPSVVECAVFALPDERFGEAV--CCAL- 504
Query: 380 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRKPFPLTSTGKI 438
C S SEV + +E L G+K P RLF + + P S+GKI
Sbjct: 505 --------VCSGSCP-----CVSEVRKFCAKEGTLAGYKRPRRLFEV--EELPRNSSGKI 549
>gi|444433460|ref|ZP_21228600.1| putative acid--CoA ligase [Gordonia soli NBRC 108243]
gi|443885605|dbj|GAC70321.1| putative acid--CoA ligase [Gordonia soli NBRC 108243]
Length = 504
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 178/392 (45%), Gaps = 46/392 (11%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
E +I +TSGTT +PKGV++ H L I +D+ L + P HI +++
Sbjct: 143 EAPAVIIYTSGTTAAPKGVLLRHENLTSYVFGSIEFANAADDEAALVSVPPYHIAAVANV 202
Query: 125 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 184
++ L G + + +F LE V + VT+ + VP +++ + +++
Sbjct: 203 ISNLYAGRRTLVLEQFTPAQWLETVREEGVTNALVVPTMLSRIVE----SDADTTVPTLR 258
Query: 185 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 244
+ GG +PS +++EA +P ++AYG+TETSS++T + D G
Sbjct: 259 NLAYGGAPMPSRVIEEALRIWPHVGFVNAYGLTETSSTITVLGPEDHRAALDGD------ 312
Query: 245 NVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAK 299
+ V G VG+P P V +++ +D G VGRI G V Y
Sbjct: 313 ----DRVRARLG-SVGRPLPGVVVEIRADDGSPLGPGEVGRICVAGEQVSAEY----AGV 363
Query: 300 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 359
V + DT D G +D+ G +++ GR + I G EN+ P E+E V+L+HP ++ +
Sbjct: 364 GRVVDAGGFFDTRDKGHLDEDGFLFVGGRADDTIIRGAENIAPAEIEDVILRHPDVLDVA 423
Query: 360 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 419
VVG+ + + + A V LR+ + ++ LR H R L K
Sbjct: 424 VVGVPDDEWGQRIEAVVVLRDGAA----------------VDADGLRDHVRSA-LRSSKT 466
Query: 420 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
P V W + P T TGK+ VRR V+ L
Sbjct: 467 PDRIVYWDE-VPRTETGKL----VRRNVVERL 493
>gi|220918306|ref|YP_002493610.1| AMP-binding domain-containing protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219956160|gb|ACL66544.1| AMP-dependent synthetase and ligase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 546
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 179/391 (45%), Gaps = 50/391 (12%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 128
I +TSGTTG PKG +SH ++ + Y + D P H G+ A MA+
Sbjct: 186 IQYTSGTTGFPKGATLSHHNIVNNGFFIGEFLRYTDADRVCIPVPFYHCFGMVLANMAIT 245
Query: 129 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
GA V + F+ + + V+Q T+L VP + +A L + S++ +
Sbjct: 246 THGAAMVIPLDNFDPLTVMRTVQQERCTALYGVPTMF--IAELDHPEFQAFDFSSLRTGI 303
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
G P E+MK+ ++ YGMTETS T DP
Sbjct: 304 MAGSPCPVEVMKKVQKDMHMPEVTICYGMTETSPVSTQSRTDDPL--------------- 348
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQFLAKP 300
+ + VG+ PHVE+K+ + + G + TRG VML YW D +
Sbjct: 349 -----EKRVTTVGQVHPHVEIKIVDPTTGRIVPRGTPGELCTRGYSVMLGYWRDPHATRE 403
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
++ G W+ TGD+ +ID+ G V +VGR + GGEN++P EVE L PG+ + V
Sbjct: 404 AIDDGR-WMHTGDLATIDEHGYVKIVGRIKDMVLRGGENIFPREVEEFLYTIPGVSDVQV 462
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ + + E ++A V+LR + L+ E +R +C+ K T +K P
Sbjct: 463 IGVPDVKYGEELMAWVKLRPG----------------VTLTGEEVRAYCKGKIAT-YKIP 505
Query: 421 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 451
R + + FP+T +GK+++ ++R + L
Sbjct: 506 RYY-KFVDGFPMTVSGKVQKYKMRETAIQEL 535
>gi|134100557|ref|YP_001106218.1| AMP-dependent synthetase and ligase [Saccharopolyspora erythraea
NRRL 2338]
gi|291006437|ref|ZP_06564410.1| AMP-dependent synthetase and ligase [Saccharopolyspora erythraea
NRRL 2338]
gi|133913180|emb|CAM03293.1| AMP-dependent synthetase and ligase [Saccharopolyspora erythraea
NRRL 2338]
Length = 521
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 176/383 (45%), Gaps = 53/383 (13%)
Query: 68 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM 127
++ +TSGTTG+PKGV ++H+ L+ A + + DV +H+ PL H GL A
Sbjct: 166 ALLAYTSGTTGAPKGVPLTHANLLSSIRAAMHAWRWSAGDVLVHSLPLSHQHGLGGVHAT 225
Query: 128 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 187
L+ G+ V +P F++ +A+++H T L VPA+ L + G S++ +
Sbjct: 226 LLAGSSAVVLPHFDAAELGDAIQRHGATVLFAVPAVHERLVAEV---PDALGAPSLRLAV 282
Query: 188 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 247
+G L +L + + L YG TE+ + + +P L+ P +LP
Sbjct: 283 SGSAPLSPDLAERIAAVMGEPPL-ERYGSTESG-----LDVSNP-LDGP-RLPG------ 328
Query: 248 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 302
VG P P VEL+V +D + G IL RG V YW+ A
Sbjct: 329 ----------TVGLPLPGVELRVGTDSGEPIEDGTEGEILLRGPQVFSGYWNLPEATAEA 378
Query: 303 STGEVWLDTGDIGSID-DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
W TGD+G ID D G + + GR+ I +GG NVYP EVE L +HP + V
Sbjct: 379 FHPGGWFRTGDLGRIDADTGYLRITGRKKELIITGGLNVYPREVELALEKHPAVASAAVA 438
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + R E V A W +ES +S+E + H R K L +K P+
Sbjct: 439 GLPSRRWGEQVTA-------WVVAESQ-----------VSAEEVVAHAR-KLLAPYKCPK 479
Query: 422 LFVLWRKPFPLTSTGKIRRDEVR 444
V + P S GK+RR E+R
Sbjct: 480 Q-VFFVDSLPRNSMGKLRRSELR 501
>gi|398824049|ref|ZP_10582396.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. YR681]
gi|398225283|gb|EJN11558.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. YR681]
Length = 526
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 176/386 (45%), Gaps = 49/386 (12%)
Query: 69 IICFTSGTTGSPKGVVISHSALI--VQS---LAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
I +TSGTTG PKG ++SH+ + VQ+ K + DDV L P+ HIGG
Sbjct: 168 IQLYTSGTTGKPKGAMLSHANFLNLVQTGNAADKPEWNRWSTDDVSLVAMPIFHIGGSGW 227
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
+ L GA V +F+ L+ EQ +T L VPA M + R + R +
Sbjct: 228 GVMGLYHGARGVIAREFDPTKVLDFFEQSGITKLFMVPAAMQFVVRQPRARTVDFSR--L 285
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
K +L G +P+ L+KE F K + YGMTET+ ++ + D +E ++ A
Sbjct: 286 KYMLYGASPIPAALLKECIEVF-KCGFVQMYGMTETTGTIVALPPED-HVEGLERMRSA- 342
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLA 298
GK P VE+ + DG VG I TR M YW+ A
Sbjct: 343 ----------------GKALPGVEIAILDVDGKPLPPREVGEIATRSGSNMAGYWNLPEA 386
Query: 299 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 358
S G+ WL TGD G +D+ G +++ R I SGGEN+YP EVE+ L HP +
Sbjct: 387 TASTLRGDGWLRTGDAGYMDEDGYLYIHDRIKDMIISGGENIYPAEVESALCDHPDVAEA 446
Query: 359 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 418
V+GI + + E V A V ++ Q + ++ + RE+ + GFK
Sbjct: 447 AVIGIPDEKWGEAVKAVVVMKPGKQATATD----------------IINFTRER-IAGFK 489
Query: 419 APRLFVLWRKPFPLTSTGKIRRDEVR 444
P+ V + P +GKI R ++R
Sbjct: 490 TPKS-VEFLPALPRNPSGKILRRQLR 514
>gi|357021951|ref|ZP_09084182.1| acyl-CoA synthetase [Mycobacterium thermoresistibile ATCC 19527]
gi|356479699|gb|EHI12836.1| acyl-CoA synthetase [Mycobacterium thermoresistibile ATCC 19527]
Length = 527
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 170/388 (43%), Gaps = 48/388 (12%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
A + + I +TSGT PKGV++S +L+ L+ I +D+ LHT PL H L
Sbjct: 171 ADDEPIRIMYTSGTESRPKGVLLSSRSLVHSYLSVIVGGEMCAEDIDLHTMPLYHCAQLD 230
Query: 123 SAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 181
+ + +GA V +PK + + L A+E+H VT P + L R
Sbjct: 231 CFLGPDIYLGATSVVLPKPDPVAILTAIERHGVTKFFAPPTVWISLLRSPRFSDF--DLT 288
Query: 182 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 241
S++K G +P E++ E P+ +L + YG TE S T +
Sbjct: 289 SLRKGYYGASSMPIEVLNEIRTRLPELRLWNLYGQTEMSPVATILG-------------- 334
Query: 242 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQF 296
P G G PA +VE V + S V G I+ R H+ L YW
Sbjct: 335 ------PEEQESKAG-SAGYPALNVETAVVDEAGSSVPPGTVGEIVHRSPHLTLGYWRDD 387
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
L K + + W +GD+G DD G + +V R+ IK+GGENV EVE V+ QHPG+
Sbjct: 388 L-KTVEAFRDGWFHSGDLGFFDDDGCLTVVDRKKDMIKTGGENVASREVEEVIYQHPGVA 446
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ V G+ + + E V A V R+ L E + HC + L G
Sbjct: 447 EVAVFGVPHPKWIEAVCAAVVPRQG----------------ATLDEETVAAHCSGR-LAG 489
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
F+ P+ V + P +GKI + E+R
Sbjct: 490 FQTPK-HVFIVETLPKNPSGKILKRELR 516
>gi|229158133|ref|ZP_04286202.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus ATCC 4342]
gi|228625362|gb|EEK82120.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus ATCC 4342]
Length = 577
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 185/388 (47%), Gaps = 51/388 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGE-DDVYLHTAPLCHIGGLSSAMA 126
++ +T GTTG PKGV+++H L+ +L + + E ++V L P H+ G+++ M
Sbjct: 224 LLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFFHVYGMTAVMN 283
Query: 127 M-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ +M G V IPKF+ K EA+++H VT P I L +K+ S++
Sbjct: 284 LSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRA 341
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
++G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 342 CISGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGV 394
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 305
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 395 PWPDTEAIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAA 440
Query: 306 ---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G
Sbjct: 441 VLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIG 500
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + E V A V L+E + SE +Q ++ K L +K P++
Sbjct: 501 VPDPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKV 543
Query: 423 FVLWRKPFPLTSTGKIRR----DEVRRE 446
+ +R P T+ GKI R DE +R+
Sbjct: 544 YE-FRDELPKTTVGKILRRVLIDEEKRK 570
>gi|78042829|ref|YP_359696.1| long-chain-fatty-acid--CoA ligase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77994944|gb|ABB13843.1| long-chain-fatty-acid--CoA ligase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 550
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 179/382 (46%), Gaps = 40/382 (10%)
Query: 65 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 124
E AVII +TSGTTG PKGV++S ALIV + +DV L P+ H G+S
Sbjct: 201 EPAVII-YTSGTTGKPKGVMLSEYALIVNAYHVKVWGDLVPEDVMLTVLPIFHGFGMSVC 259
Query: 125 M-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 183
M A L+ G+ V +P+F + +AV +H T VP + +A L T S
Sbjct: 260 MNAPLLTGSSVVLLPRFSVEEFFKAVAKHRPTLFAGVPTMF--VAMLNHKDLTKYDLSSF 317
Query: 184 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 243
+ G +P E+ KE A+++ YG+TE ++ Y +T +
Sbjct: 318 RGCFVGAAAMPPEV-KEQFEKMTGAQVLEGYGLTEAVTA-KCCNPYRGVNKT-----GSI 370
Query: 244 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 303
G P++V + G+P P E +G I + +ML Y+ Q A V
Sbjct: 371 GIPFPDTVMEIVDAFTGEPLPPGE----------IGEIRLKSPDLMLGYYKQEAATREV- 419
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ WL TGDIG +D+ G ++V R+ I +GG NVYP EVE VL HP + VVGI
Sbjct: 420 IKDGWLYTGDIGRMDEDGYFYIVDRKKDLIITGGFNVYPREVEDVLYSHPDVKEACVVGI 479
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+ E+V A V L+E + S E L+ CRE NLT +K P++
Sbjct: 480 PDNYYGEVVKAYVVLKEGAK----------------TSPEELKAFCRE-NLTHYKVPKII 522
Query: 424 VLWRKPFPLTSTGKIRRDEVRR 445
+ + P ++ GKI R ++
Sbjct: 523 EI-KDDLPKSAIGKILRRALKE 543
>gi|443693463|gb|ELT94820.1| hypothetical protein CAPTEDRAFT_20304 [Capitella teleta]
Length = 533
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 180/406 (44%), Gaps = 55/406 (13%)
Query: 56 LPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQ-------SLAKIAIVGYGEDDV 108
P H + ++ ++SGTTG PKGV+I+H ++ Q + +V E V
Sbjct: 164 FPSVHINPVDDVAVLPYSSGTTGLPKGVMITHYNIVSQIMQFTHEAYVDQEMVATDEQSV 223
Query: 109 YLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL 167
L P H G+ M A L+ G V +P+FE LE ++++ V SL+ VP I+ L
Sbjct: 224 VLGFLPFFHCYGMLGVMTATLLQGNRLVTLPRFEPTLFLETIQKYKVNSLLLVPPIVLFL 283
Query: 168 ATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT 227
A V + SVKK G LP E+M++ + AYGMTET+ T
Sbjct: 284 AKHPMVSEY--DLSSVKKAGCGAAPLPEEVMQQFVKRLKVPQSKQAYGMTETTLVST--- 338
Query: 228 LYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRI 281
+P V P S G P P+VE++V G+ G +
Sbjct: 339 -----------MPPQTSPVRPGSS--------GPPVPNVEIQVVDPETGAVLGTHQRGEL 379
Query: 282 LTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 341
RG +VM Y +Q A S E WL TGDIG DD ++V R IK G V
Sbjct: 380 WIRGPNVMKGYLNQPEATHSTKDDEGWLHTGDIGYYDDDSYFYIVDRMKELIKFKGFQVA 439
Query: 342 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLS 401
P E+EA+L +HP I V+G+ +A E+ A V L+ C+ S + + ++
Sbjct: 440 PAELEALLQEHPKIADAAVIGVPDAEAGELPKAYVVLK-------PKCEMSVDDVKNFVA 492
Query: 402 SEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 447
++ R FK R V + P + +GKI R E+R ++
Sbjct: 493 GKMAR----------FKQLRGGVDFVASVPKSPSGKILRKELRAQL 528
>gi|347756220|ref|YP_004863783.1| acyl-CoA synthetase /AMP-acid ligase II [Candidatus
Chloracidobacterium thermophilum B]
gi|347588737|gb|AEP13266.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Candidatus
Chloracidobacterium thermophilum B]
Length = 514
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 173/383 (45%), Gaps = 57/383 (14%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 128
++C+T G+TG+PKG V+SH A+ ++ + G DDV L APL H GGL+ A L
Sbjct: 168 VVCYTGGSTGTPKGAVLSHRAIFANAVNTVLSWGIRPDDVTLLDAPLFHTGGLNVLTAPL 227
Query: 129 M-VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 185
+ +G + F + +A+E+H VT L VP + +L R W D ++
Sbjct: 228 VAIGGTSIVASGFAPEQTFDAIERHGVTILFGVPTMFIELQRHPR----WATADFSRLRF 283
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
+++GG P + + + YG+TE + + P E
Sbjct: 284 VISGGAPCPMPVFEAFWAK--GVAFRTGYGLTEAGPN----NFWLPAAE----------- 326
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKP 300
VH+ G VG P VE + SDG++ VG + RG H+ YW+ +A
Sbjct: 327 -----VHRKPGA-VGYPLWSVEACIVRSDGTACTADEVGELCLRGPHLFSGYWNNPMATA 380
Query: 301 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 360
+ E WL TGD+ + D G +VGR SGGENVYP EVE+VL + P + V
Sbjct: 381 AALDAEGWLHTGDLATCDGDGCFRIVGRLKDMFISGGENVYPAEVESVLHECPAVAEAAV 440
Query: 361 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 420
+G+ + E+ VA V L E S L CR + L G+K P
Sbjct: 441 LGVPDPTWGEVGVAFVVLTEE------------------RSDAELTAFCRAR-LAGYKVP 481
Query: 421 RLFVLWRKPFPLTSTGKIRRDEV 443
+ F+ R P L TG + D+V
Sbjct: 482 KRFI--RLP-ALPKTGAHKVDKV 501
>gi|423411695|ref|ZP_17388815.1| hypothetical protein IE1_00999 [Bacillus cereus BAG3O-2]
gi|423432519|ref|ZP_17409523.1| hypothetical protein IE7_04335 [Bacillus cereus BAG4O-1]
gi|401104561|gb|EJQ12534.1| hypothetical protein IE1_00999 [Bacillus cereus BAG3O-2]
gi|401116126|gb|EJQ23969.1| hypothetical protein IE7_04335 [Bacillus cereus BAG4O-1]
Length = 561
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 185/388 (47%), Gaps = 51/388 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGE-DDVYLHTAPLCHIGGLSSAMA 126
++ +T GTTG PKGV+++H L+ +L + + E ++V L P H+ G+++ M
Sbjct: 208 LLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFFHVYGMTAVMN 267
Query: 127 M-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ +M G V IPKF+ K EA+++H VT P I L +K+ S++
Sbjct: 268 LSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRA 325
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
++G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 326 CISGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGV 378
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 305
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 379 PWPDTEAIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAA 424
Query: 306 EV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G
Sbjct: 425 VLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIG 484
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + E V A V L+E + SE +Q ++ K L +K P++
Sbjct: 485 VPDPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKV 527
Query: 423 FVLWRKPFPLTSTGKIRR----DEVRRE 446
+ +R P T+ GKI R DE +R+
Sbjct: 528 YE-FRDELPKTTVGKILRRVLIDEEKRK 554
>gi|228987775|ref|ZP_04147886.1| Long-chain-fatty-acid--CoA ligase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228772049|gb|EEM20504.1| Long-chain-fatty-acid--CoA ligase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 577
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 185/388 (47%), Gaps = 51/388 (13%)
Query: 69 IICFTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGE-DDVYLHTAPLCHIGGLSSAMA 126
++ +T GTTG PKGV+++H L+ +L + + E ++V L P H+ G+++ M
Sbjct: 224 LLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFFHVYGMTAVMN 283
Query: 127 M-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 185
+ +M G V IPKF+ K EA+++H VT P I L +K+ S++
Sbjct: 284 LSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRA 341
Query: 186 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 245
++G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 342 CISGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGV 394
Query: 246 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 305
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 395 PWPDTEAIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAA 440
Query: 306 ---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G
Sbjct: 441 VLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIG 500
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + E V A V L+E + SE +Q ++ K L +K P++
Sbjct: 501 VPDPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKV 543
Query: 423 FVLWRKPFPLTSTGKIRR----DEVRRE 446
+ +R P T+ GKI R DE +R+
Sbjct: 544 YE-FRDELPKTTVGKILRRVLIDEEKRK 570
>gi|452961015|gb|EME66323.1| long-chain-fatty-acid--CoA ligase [Rhodococcus ruber BKS 20-38]
Length = 518
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 178/388 (45%), Gaps = 43/388 (11%)
Query: 63 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 122
A E ++ ++SGTTG PKGV ++H L S +A++ + + D L PL H+GG
Sbjct: 157 AAETTALLLYSSGTTGRPKGVQLTHRNLFAHSEDVLAVLPFTDGDCLLVAMPLFHVGGTC 216
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 182
A+ + G VF + ++ S + + + P I A LA + +
Sbjct: 217 YAIMGIHDGRRCVFTREADAPSLFGGLAAGANIAFLVPPVIAAVLAAGEQAIGAFA---R 273
Query: 183 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 242
+K+I G +P L++ A ++P+ + + YGMTE + +T + LP
Sbjct: 274 LKRITYGAAPMPLPLLRGALAAWPETEFVQVYGMTELAGVITAL------------LP-- 319
Query: 243 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQF 296
+V + + + G P P VE++V + +G + R A YW++
Sbjct: 320 --DVHRDPAQERRMASAGTPIPGVEMRVVDPATLEDVAPGGIGELWWRSAQTTPGYWNRP 377
Query: 297 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 356
A T + WL +GD+G +DDGG V++ R I +GGENVY EVE VL++HP +
Sbjct: 378 DATAETITPDGWLRSGDMGRVDDGGFVFIEDRLKDMIITGGENVYCPEVERVLVEHPAVA 437
Query: 357 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 416
+ V+G+ + + E V A V L DQ + +EL+ + R+H L
Sbjct: 438 EVAVIGVPDEKWGETVKAVVVLAP---------DQKADEQELV---DYTRRH-----LAH 480
Query: 417 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
FK P + P TGKI + +R
Sbjct: 481 FKCPSSIDIVDM-LPRNPTGKILKRSLR 507
>gi|399053328|ref|ZP_10742180.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. CF112]
gi|398048693|gb|EJL41159.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. CF112]
Length = 522
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 170/382 (44%), Gaps = 50/382 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-ML 128
I +TSGT PKGV+++H +++ + ++ I DDV +H PL H L + +
Sbjct: 175 ILYTSGTESRPKGVMLTHGSILSEYVSTIIDGNMSHDDVAIHALPLFHSAQLHCFLGPYI 234
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
+G + + + LE VE H T L P + +A L + S++K
Sbjct: 235 YLGGTGIILEQATPGLMLEMVETHKATQLFCPPTVW--IALLRSPDFASRNLSSLQKCYY 292
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G +P E++KE P A+ + YG TE + V P
Sbjct: 293 GAAIMPVEVLKELGTRLPNAQFYNFYGQTEVAP---------------------LATVLP 331
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAKPSV 302
+ GKPA +VE K+ D V G I+ R +H M+ Y+ D+ + +
Sbjct: 332 PKDQIRKAGSAGKPALNVETKIVDDEGVEVPRGCIGEIVHRTSHAMIGYFRDEEKTRAAF 391
Query: 303 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 362
G W +GD+G +D+ G + +V R+ IKSGGENV EVE ++ QHP + + V+G
Sbjct: 392 QGG--WFHSGDLGIMDEEGYITVVDRKKDMIKSGGENVASREVEELIYQHPKVSEVAVIG 449
Query: 363 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 422
+ + E V A V K E L S E+L C+E+ L FKAP+
Sbjct: 450 VPHPYWIEAVTAVV---------------VPKAGETLTSEELL-AFCKER-LASFKAPK- 491
Query: 423 FVLWRKPFPLTSTGKIRRDEVR 444
+V P +GKI + E+R
Sbjct: 492 YVFITDTLPRNPSGKILKRELR 513
>gi|379749584|ref|YP_005340405.1| hypothetical protein OCU_48650 [Mycobacterium intracellulare ATCC
13950]
gi|378801948|gb|AFC46084.1| hypothetical protein OCU_48650 [Mycobacterium intracellulare ATCC
13950]
Length = 505
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 182/403 (45%), Gaps = 45/403 (11%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 123
P+ I+ FTSGTT PK V +SH+ L + + D L P HI G+S+
Sbjct: 138 PDAVAIVLFTSGTTSQPKAVELSHNNLTSYVTGTVEFGAAADTDAALICVPPYHIAGVSA 197
Query: 124 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG---- 179
A++ L G V++P F+++ + + VT+ VP ++ + T++ + G
Sbjct: 198 ALSNLYAGRKMVYLPNFDAQEWVRLINTENVTTATVVPTMLDRIVTVL---ENGDGPAIE 254
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
S++ + GG + L++ A P ++AYG+TETSS++ +T P
Sbjct: 255 LPSLRNLAYGGSKVGLPLVRRALELLPDVGFVNAYGLTETSSTIAVLT--------PDDH 306
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWD 294
A TP + VG+ +EL++ + + G + RG V RY
Sbjct: 307 RAALAASTPEGARRLG--SVGQAVAGIELQIRDEVGNVLPPGETGELFVRGEQVSGRYT- 363
Query: 295 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 354
SV W T DI +DD G +++ GR + I GGEN+ P E+E VL++HP
Sbjct: 364 ---GIGSVLDENGWFPTKDIAMLDDEGYLFIGGRSDDTIIRGGENIAPAELEEVLVEHPH 420
Query: 355 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 414
+ + VVG+ E QW ++ + LR+ R K+L
Sbjct: 421 VRDVAVVGV----------------EDPQWGQAIVAVVVPAPGVDPDPAELREFVR-KSL 463
Query: 415 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 457
G + P V++R P T+TGK+ R E+ + ++ L+S P+
Sbjct: 464 RGSRTPD-EVVFRDELPTTATGKVLRREI-IQTLTELRSAPAQ 504
>gi|403235897|ref|ZP_10914483.1| AMP-dependent synthetase and ligase [Bacillus sp. 10403023]
Length = 452
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 188/395 (47%), Gaps = 55/395 (13%)
Query: 70 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAML 128
I +TSG+TG+PKG +++HS + ++ + EDDV+ P+ H+ G+ S ++ +
Sbjct: 101 ILYTSGSTGAPKGAMLTHSNFVNTAIITAEGMRCTEDDVFYVAVPVFHVFGMVPSILSTV 160
Query: 129 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKI 186
VGA V K+ +K ALE + +T VP + L +K D S++
Sbjct: 161 AVGARMVLAEKYNAKEALETTQNEKITVKHGVPTMF----ILELNHAEFKNYDLSSLRTG 216
Query: 187 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 246
+ P E++K ++ YG++ETS +LT MT +D
Sbjct: 217 IIAAAPCPVEIVKRIRTDM-GCDIVVCYGLSETSPTLT-MTAFDDD-------------- 260
Query: 247 TPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPS 301
Q + VGK P E+K+ ++ G + VG I RG +M Y++
Sbjct: 261 -----DQIRAETVGKVLPGAEVKIVNEFKEDVGLNEVGEIACRGFGIMKGYYNMPEKTRE 315
Query: 302 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 361
+ W +GD+G++D GN+ +VGR+ I GG N+YP E+E V HP ++ + +V
Sbjct: 316 ALDDDGWFYSGDLGTLDVQGNLRIVGRKKEMIIRGGYNIYPREIEEVFYTHPDVMEVAIV 375
Query: 362 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 421
G+ + L E+ AC++++ + S E L + R K + +K P
Sbjct: 376 GLPDTVLGEISCACIKIKPNTSP----------------SVEELMEFVRPK-VADYKVPD 418
Query: 422 LFVLWRKPFPLTSTGKIRR----DEVRREVMSHLK 452
++ + FP+T++GKIR+ D+++ ++ + L+
Sbjct: 419 KLLIMDE-FPMTASGKIRKVSLQDQLKEKLEAELR 452
>gi|398816032|ref|ZP_10574690.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. BC25]
gi|398033379|gb|EJL26682.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. BC25]
Length = 552
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 179/404 (44%), Gaps = 47/404 (11%)
Query: 61 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IG 119
+ +P+ + + +TSGTTG PKGV++SH ++ ++ G +D P H G
Sbjct: 184 TLSPDDVINMQYTSGTTGFPKGVMLSHVNIVNNAIKVAECQRLGLEDKVCIPVPFFHCFG 243
Query: 120 GLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 179
+ +A + GA V + F+ L VE T+L VP + +A L +
Sbjct: 244 CVMGTLACVATGATMVPVIAFDPGVVLAVVEAERCTALYGVPTMF--IAELNHPMFADRD 301
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 239
S++ + G P E+MK+ + + AYG TE S +T
Sbjct: 302 LSSLRTGIMAGSLCPIEVMKKVVDQMGIRDITIAYGQTEASPVIT--------------- 346
Query: 240 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW 293
P + + VG+ VE K+ + + G + TRG VM Y+
Sbjct: 347 -----QTVPEDSLERKVSTVGRLHAEVEAKIIDPATGDILPPGVQGELCTRGYLVMKGYY 401
Query: 294 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 353
+ E WL TGD+ ++D+ G + GR I GGEN+YP EVE L HP
Sbjct: 402 NMPEETVKAIDHEGWLHTGDLATVDEEGYYRITGRLKDMIIRGGENIYPREVEEFLYTHP 461
Query: 354 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 413
++ + +VGI +A+ E V+AC+R+ K E L EV R +C E
Sbjct: 462 KVLDVQIVGIPDAKYGEQVLACIRV---------------KPHETLTEDEV-RDYC-EGK 504
Query: 414 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 457
+ +K PR ++ + +P+T++GKI++ ++R + + + N
Sbjct: 505 IAHYKVPR-YIQFVDEYPMTASGKIQKFKLREQALELFRQSNPN 547
>gi|171315822|ref|ZP_02905053.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
gi|171099011|gb|EDT43796.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
Length = 575
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 202/449 (44%), Gaps = 53/449 (11%)
Query: 14 ELQHTAIPSLRWHVSLGS-SSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVII 70
+L+ +PSLR VS+ + + D++ D L L ++ T A + I
Sbjct: 163 DLRAARVPSLRTVVSMSEVAPAGMFRFTDVMARGRDTLDVAQLNAIGAT--LAATDPINI 220
Query: 71 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLM 129
FTSGTTGSPKG ++H ++ + + + E D PL H G+ A +A +
Sbjct: 221 QFTSGTTGSPKGATLTHRNVVNNARFIAMAMRFSEQDALCIPVPLYHCFGMVLAVLACVS 280
Query: 130 VGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 188
GA VF + F+ + L AV T+L VP + +A L +++ +
Sbjct: 281 KGAAMVFPGEAFDPVATLAAVADERCTALHGVPTMF--IAELDHPAFAKFDLSTLRTGIM 338
Query: 189 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 248
G P E MK + +++ AYGMTETS P +F + T
Sbjct: 339 AGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSFQSSTD 379
Query: 249 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 303
+ + + + VG+ PH+E+K+ V G + T+G VML YWD AK
Sbjct: 380 DPLEK-RTTTVGRIQPHLEVKIVDPEGRIVPVGATGELCTKGYSVMLGYWDDD-AKTREV 437
Query: 304 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 363
+ W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I V G+
Sbjct: 438 LVDGWMRTGDLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEYLFRHPKIQSAQVFGV 497
Query: 364 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 423
+A+ E + A + LR Q SE + +R C + +K PR +
Sbjct: 498 PDAKYGEELCAWIVLRADEQMSEDD----------------VRAFC-TGQIAHYKIPR-Y 539
Query: 424 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 452
+ + P+T TGK+++ +R ++ LK
Sbjct: 540 IRFVDELPMTVTGKVQKFVMRERMIEELK 568
>gi|424859031|ref|ZP_18283045.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356661540|gb|EHI41851.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 511
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 177/394 (44%), Gaps = 57/394 (14%)
Query: 64 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLS 122
P+ ++ +T GTTG PKGV++S ++ + +A VG+ + LH APL H+ +
Sbjct: 157 PDSLAVLMYTGGTTGRPKGVMLSARQILTSAFGALASVGFPNAAERCLHIAPLFHLAAFA 216
Query: 123 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAI---MADLATLIRVKKTWKG 179
+ M+GA HV I +F + +E + +T VP + M D A ++T
Sbjct: 217 GMIQQSMLGATHVVIGEFTVEGLVETIAAKQITMTTLVPTMVPWMLDYA-----ERTGAS 271
Query: 180 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD-------PT 232
S++ I G +P ++ + P KL YGMTE T + D
Sbjct: 272 LGSLRYIGYGAAPMPEAVLTRLLAALPHVKLRQGYGMTELGPVATILRDEDHHDRDHPER 331
Query: 233 LETPGQLPQAFGNVTPNS--VHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVML 290
L + G+ V N V QP+G VG ++ RGAHVM+
Sbjct: 332 LRSVGRAAAHAEVVVVNKAGVEQPRG--------------------KVGEVVVRGAHVMI 371
Query: 291 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 350
YW+ L + + + W+ TGD+G +D+ G ++LV R I SGGENVY EVEAV+
Sbjct: 372 GYWNN-LGETQKALQDGWMHTGDMGYMDEHGYLFLVDRLKDMIVSGGENVYSAEVEAVIH 430
Query: 351 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 410
+H I V+G+ + E V A V L ++ E LR +
Sbjct: 431 RHEAIASCAVIGVPDEVWGERVHAVVVLVPGAS----------------VTPEELRDYVG 474
Query: 411 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 444
E+ + +KAPR V + PL+ GKI + +R
Sbjct: 475 ER-IARYKAPRT-VEFIDQMPLSPVGKILKRTLR 506
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,488,181,811
Number of Sequences: 23463169
Number of extensions: 322423063
Number of successful extensions: 1031066
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 34988
Number of HSP's successfully gapped in prelim test: 20184
Number of HSP's that attempted gapping in prelim test: 877380
Number of HSP's gapped (non-prelim): 92435
length of query: 458
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 312
effective length of database: 8,933,572,693
effective search space: 2787274680216
effective search space used: 2787274680216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)