Your job contains 1 sequence.
>012675
MNEKDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRM
EIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIG
WRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFR
IAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGI
RGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLT
TALQPRDKIWQGMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPF
ESKPKDIPGRKRPLLENRRAVVMEPHERKVHVLFQQLQLIRNEKMKKRKLKQQHRKKEIE
AERAKDEQLTRKRQREERRERYREQDKLMKKIRRHSEV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012675
(458 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2033050 - symbol:AT1G06720 species:3702 "Arabi... 1507 1.5e-154 1
UNIPROTKB|F1NH69 - symbol:BMS1 "Uncharacterized protein" ... 1059 4.4e-107 1
UNIPROTKB|E1BPP2 - symbol:BMS1 "Uncharacterized protein" ... 1053 1.9e-106 1
UNIPROTKB|Q14692 - symbol:BMS1 "Ribosome biogenesis prote... 1040 4.6e-105 1
UNIPROTKB|F1PKN2 - symbol:BMS1 "Uncharacterized protein" ... 1039 5.8e-105 1
ZFIN|ZDB-GENE-060720-2 - symbol:bms1l "BMS1-like, ribosom... 1021 7.3e-105 2
UNIPROTKB|F1RG23 - symbol:BMS1 "Uncharacterized protein" ... 966 3.2e-97 1
RGD|1308043 - symbol:Bms1 "BMS1 homolog, ribosome assembl... 945 5.3e-95 1
DICTYBASE|DDB_G0287891 - symbol:bms1l "BMS1-like ribosome... 942 1.1e-94 1
ASPGD|ASPL0000005995 - symbol:AN6334 species:162425 "Emer... 936 4.8e-94 1
POMBASE|SPBC31E1.06 - symbol:bms1 "GTP binding protein Bm... 934 7.8e-94 1
UNIPROTKB|E9PTV4 - symbol:Bms1 "Protein Bms1" species:101... 933 1.0e-93 1
CGD|CAL0002359 - symbol:BMS1 species:5476 "Candida albica... 880 4.1e-88 1
UNIPROTKB|Q5A9Y0 - symbol:BMS1 "Putative uncharacterized ... 880 4.1e-88 1
FB|FBgn0036686 - symbol:CG7728 species:7227 "Drosophila m... 879 5.3e-88 1
WB|WBGene00022021 - symbol:Y61A9LA.10 species:6239 "Caeno... 866 1.3e-86 1
SGD|S000006138 - symbol:BMS1 "GTPase required for ribosom... 806 7.7e-80 1
GENEDB_PFALCIPARUM|PFA0330w - symbol:AARP2 "pfAARP2 prote... 472 3.3e-53 2
UNIPROTKB|Q8I275 - symbol:AARP2 "PfAARP2 protein" species... 472 3.3e-53 2
UNIPROTKB|E2QYA6 - symbol:E2QYA6 "Uncharacterized protein... 259 1.8e-19 1
UNIPROTKB|J9NS98 - symbol:TSR1 "Uncharacterized protein" ... 259 2.6e-19 1
UNIPROTKB|F1MSR6 - symbol:TSR1 "Uncharacterized protein" ... 246 8.1e-18 1
UNIPROTKB|Q2NL82 - symbol:TSR1 "Pre-rRNA-processing prote... 237 8.4e-17 1
UNIPROTKB|Q5R434 - symbol:TSR1 "Pre-rRNA-processing prote... 234 1.8e-16 1
MGI|MGI:2144566 - symbol:Tsr1 "TSR1 20S rRNA accumulation... 229 6.7e-16 1
UNIPROTKB|F1PXP0 - symbol:F1PXP0 "Uncharacterized protein... 222 3.5e-15 1
RGD|2322150 - symbol:Tsr1 "TSR1, 20S rRNA accumulation, h... 222 4.1e-15 1
UNIPROTKB|Q5XGY1 - symbol:tsr1 "Pre-rRNA-processing prote... 221 5.4e-15 1
ZFIN|ZDB-GENE-030131-3762 - symbol:tsr1 "TSR1, 20S rRNA a... 216 2.0e-14 1
UNIPROTKB|F1NNP8 - symbol:LOC100857289 "Uncharacterized p... 214 3.2e-14 1
FB|FBgn0037073 - symbol:CG7338 species:7227 "Drosophila m... 184 6.9e-11 1
TAIR|locus:2035893 - symbol:AT1G42440 "AT1G42440" species... 181 1.4e-10 1
POMBASE|SPAC23H4.15 - symbol:SPAC23H4.15 "ribosome biogen... 170 2.3e-09 1
DICTYBASE|DDB_G0278331 - symbol:DDB_G0278331 "Pre-rRNA-pr... 158 5.1e-08 1
UNIPROTKB|Q61WR2 - symbol:tag-151 "Pre-rRNA-processing pr... 151 2.8e-07 1
WB|WBGene00006497 - symbol:tag-151 species:6239 "Caenorha... 147 7.7e-07 1
UNIPROTKB|Q19329 - symbol:tag-151 "Pre-rRNA-processing pr... 147 7.7e-07 1
SGD|S000002218 - symbol:TSR1 "Protein required for proces... 120 0.00070 1
UNIPROTKB|G4NCG9 - symbol:MGG_01087 "Ribosome biogenesis ... 120 0.00072 1
>TAIR|locus:2033050 [details] [associations]
symbol:AT1G06720 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=RCA] [GO:0006606 "protein import into
nucleus" evidence=RCA] InterPro:IPR000795 InterPro:IPR012948
Pfam:PF00009 Pfam:PF08142 SMART:SM00785 GO:GO:0005525 EMBL:CP002684
GO:GO:0005634 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950 IPI:IPI00521552
RefSeq:NP_172157.1 UniGene:At.12092 ProteinModelPortal:F4IDR3
SMR:F4IDR3 PRIDE:F4IDR3 EnsemblPlants:AT1G06720.1 GeneID:837182
KEGG:ath:AT1G06720 Uniprot:F4IDR3
Length = 1147
Score = 1507 (535.5 bits), Expect = 1.5e-154, P = 1.5e-154
Identities = 295/452 (65%), Positives = 338/452 (74%)
Query: 3 EKDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEI 62
E+DG Q +E G D++KE E KQ N E NDLDE TR+EL GFRTGTYLR+EI
Sbjct: 702 ERDGNNPR-SQADEPGYADKLKEAQEITKQRNELEYNDLDEETRIELAGFRTGTYLRLEI 760
Query: 63 HDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWR 122
H+VP+EMVE+FDPCHP+LVGGIG GE NVGYMQ RLK+HRW HKKVLK+RDPIIVSIGWR
Sbjct: 761 HNVPYEMVEFFDPCHPILVGGIGFGEDNVGYMQARLKKHRW-HKKVLKTRDPIIVSIGWR 819
Query: 123 RFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIA 182
R+QTIPV+AIEDR+GRHRMLKYTPEHMHCLA+FWGPL PP TG VA QNLSNNQA FRI
Sbjct: 820 RYQTIPVFAIEDRNGRHRMLKYTPEHMHCLASFWGPLVPPNTGFVAFQNLSNNQAGFRIT 879
Query: 183 ATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRG 242
AT+VVLEFNH+ +I KKIKLVG PCKI KKTA IKDMFTSDLE+A+ EG VRTVSGIRG
Sbjct: 880 ATSVVLEFNHQARIVKKIKLVGTPCKIKKKTAFIKDMFTSDLEIARFEGSSVRTVSGIRG 939
Query: 243 QVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTA 302
QVKKA K + N+ + EGIARCTFED+I MSD+VF+R W VE+P+FYNPLTTA
Sbjct: 940 QVKKAGKNMLDNKAE-------EGIARCTFEDQIHMSDMVFLRAWTTVEVPQFYNPLTTA 992
Query: 303 LQPRDKIWQGMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFES 362
LQPRDK W GMKT ELRRE N+ IPVNK+SLYK I R +KFNPL IPK L+ LPF S
Sbjct: 993 LQPRDKTWNGMKTFGELRRELNIPIPVNKDSLYKAIERKQKKFNPLQIPKRLEKDLPFMS 1052
Query: 363 KPKDIPGRKRPLLENRRAVVMEPHERKVHVLFQQLQLIRNEXXXXXXXXXXXXXXEIEAE 422
KPK+IP RKRP LE++RAV+MEP ERK H + QQ QL+++ E EAE
Sbjct: 1053 KPKNIPKRKRPSLEDKRAVIMEPKERKEHTIIQQFQLLQHHTMKKKKATDQKKRKEYEAE 1112
Query: 423 RAKDXXXXXXXXXXXXXXXXXXXDKLMKKIRR 454
+AK+ DK KK RR
Sbjct: 1113 KAKNEEINKKRRREERRDRYREEDKQKKKTRR 1144
>UNIPROTKB|F1NH69 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:AADN02035303 EMBL:AADN02035304 IPI:IPI00604102
Ensembl:ENSGALT00000004133 Uniprot:F1NH69
Length = 1304
Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
Identities = 205/385 (53%), Positives = 273/385 (70%)
Query: 21 DQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVL 80
D +KEE+ + Q+N E D D+ TR++ EGFR G Y+R+EI +VP E V FDP +P++
Sbjct: 869 DDLKEEMHKQAQLNKTEFEDQDDETRVQYEGFRPGMYVRIEIENVPCEFVLNFDPHYPII 928
Query: 81 VGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHR 140
+GG+G E NVGY+Q+RLK+HRW+ KK+LK+RDP+I+S GWRRFQTIPV+ IED +GRHR
Sbjct: 929 LGGLGNSEGNVGYVQLRLKKHRWY-KKILKTRDPLILSFGWRRFQTIPVFYIEDHNGRHR 987
Query: 141 MLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKI 200
+LKYTP+HMHC ATFWGP+ P TG +AVQ++S FRIAAT VVL+ + + + KK+
Sbjct: 988 LLKYTPQHMHCGATFWGPITPQGTGFLAVQSVSGTTPDFRIAATGVVLDLDKSITVVKKL 1047
Query: 201 KLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKG 260
KL G+P KIFK T+ IK MF S LEVA+ EG +RTVSGIRGQ+KKA +
Sbjct: 1048 KLTGFPFKIFKNTSFIKGMFNSQLEVAKFEGAAIRTVSGIRGQIKKALRA---------- 1097
Query: 261 GQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQPRDK--IWQGMKTVAE 318
P G R TFED++LMSDIVF+R W V IP+FYNP+T+ L+P + W+GM+T +
Sbjct: 1098 --PA-GAFRATFEDKLLMSDIVFVRTWYPVSIPKFYNPVTSLLKPAGEKDSWKGMRTTGQ 1154
Query: 319 LRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPKDIPGR-KRPLLEN 377
LR + + + NK+SLYKPI R R FN L IPK+LQ ALPF++KPK++ + K P +
Sbjct: 1155 LRHDQGIKLKQNKDSLYKPIVREKRHFNKLHIPKALQKALPFKNKPKNLEKKGKTPKDQW 1214
Query: 378 RRAVVMEPHERKVHVLFQQLQLIRN 402
R AV+MEPHE+K+ L L + N
Sbjct: 1215 RPAVIMEPHEKKISALLNALSTVNN 1239
>UNIPROTKB|E1BPP2 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:DAAA02061559 EMBL:DAAA02061560 IPI:IPI00838890
Ensembl:ENSBTAT00000048816 Uniprot:E1BPP2
Length = 1290
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 210/386 (54%), Positives = 270/386 (69%)
Query: 21 DQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVL 80
D +K E++ + Q+N AE D ++ R++ EGFR G Y+R+EI +VP E V FDP +P++
Sbjct: 857 DDLKGEMQKQAQLNRAEFEDQEDEARVQYEGFRPGMYVRIEIENVPCEFVLNFDPHYPII 916
Query: 81 VGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHR 140
+GG+G E NVGY+Q+RLK+HRW+ KK+LKSRDPII S+GWRRFQTIP+Y IED +GR R
Sbjct: 917 LGGLGNSEGNVGYVQMRLKKHRWY-KKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQR 975
Query: 141 MLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKI 200
+LKYTP+HMHC ATFWGP+ P TG +AVQ++S + FRIAAT VVL+ + +KI KK+
Sbjct: 976 LLKYTPQHMHCGATFWGPITPQGTGFLAVQSVSGSMPDFRIAATGVVLDLDKSIKIVKKL 1035
Query: 201 KLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKG 260
KL G+P KIFK T+ IK MF S LEVA+ EG +RTVSGIRGQ+KKA +
Sbjct: 1036 KLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRA---------- 1085
Query: 261 GQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQP-RDK-IWQGMKTVAE 318
P EG R TFED++LMSDIVFMR W V IP FYNP+T+ L+P +K W GM+T +
Sbjct: 1086 --P-EGAFRATFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQ 1142
Query: 319 LRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPK-DIPGRKRPLLEN 377
LR H + + NK+SLYKPI R + FN L IPK+LQ ALPF+SKPK K P
Sbjct: 1143 LRLAHGIKLKANKDSLYKPIVRQKKHFNSLHIPKALQKALPFKSKPKTQAKAGKTPKDRV 1202
Query: 378 RRAVVMEPHERKVHVLFQQLQLIRNE 403
R AV+ EPHERK+ L L + +E
Sbjct: 1203 RPAVIREPHERKILALLDALSTVHSE 1228
>UNIPROTKB|Q14692 [details] [associations]
symbol:BMS1 "Ribosome biogenesis protein BMS1 homolog"
species:9606 "Homo sapiens" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISS;IDA] [GO:0042255 "ribosome assembly" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000795
InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142 SMART:SM00785
GO:GO:0005525 GO:GO:0005524 GO:GO:0005730 GO:GO:0003924
GO:GO:0006184 eggNOG:COG5192 EMBL:D80009 EMBL:AL022344
EMBL:CH471160 EMBL:BC043345 EMBL:BC150252 IPI:IPI00006099
RefSeq:NP_055568.3 UniGene:Hs.10848 ProteinModelPortal:Q14692
SMR:Q14692 IntAct:Q14692 STRING:Q14692 PhosphoSite:Q14692
DMDM:27151474 PaxDb:Q14692 PeptideAtlas:Q14692 PRIDE:Q14692
Ensembl:ENST00000374518 GeneID:9790 KEGG:hsa:9790 UCSC:uc001jaj.3
CTD:9790 GeneCards:GC10P043277 H-InvDB:HIX0059462
H-InvDB:HIX0172328 H-InvDB:HIX0172329 HGNC:HGNC:23505 HPA:HPA036589
MIM:611448 neXtProt:NX_Q14692 PharmGKB:PA162377556
HOGENOM:HOG000166882 HOVERGEN:HBG023890 InParanoid:Q14692 KO:K14569
OMA:ASYGFEM OrthoDB:EOG4KWJS4 PhylomeDB:Q14692 ChiTaRS:BMS1
GenomeRNAi:9790 NextBio:36866 Bgee:Q14692 CleanEx:HS_BMS1
Genevestigator:Q14692 GermOnline:ENSG00000165733 GO:GO:0042255
InterPro:IPR007034 Pfam:PF04950 Uniprot:Q14692
Length = 1282
Score = 1040 (371.2 bits), Expect = 4.6e-105, P = 4.6e-105
Identities = 206/386 (53%), Positives = 269/386 (69%)
Query: 21 DQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVL 80
D +K E++ + Q+N AE D D+ R++ EGFR G Y+R+EI +VP E V+ FDP +P++
Sbjct: 849 DDLKGEMQKQAQLNRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVQNFDPHYPII 908
Query: 81 VGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHR 140
+GG+G E NVGY+Q+RLK+HRW+ KK+LKSRDPII S+GWRRFQTIP+Y IED +GR R
Sbjct: 909 LGGLGNSEGNVGYVQMRLKKHRWY-KKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQR 967
Query: 141 MLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKI 200
+LKYTP+HMHC A FWGP+ P TG +A+Q++S FRIAAT VVL+ + +KI KK+
Sbjct: 968 LLKYTPQHMHCGAAFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKSIKIVKKL 1027
Query: 201 KLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKG 260
KL G+P KIFK T+ IK MF S LEVA+ EG +RTVSGIRGQ+KKA +
Sbjct: 1028 KLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRA---------- 1077
Query: 261 GQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQP-RDK-IWQGMKTVAE 318
P EG R +FED++LMSDIVFMR W V IP FYNP+T+ L+P +K W GM+T +
Sbjct: 1078 --P-EGAFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQ 1134
Query: 319 LRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPK-DIPGRKRPLLEN 377
LR H + + NK+SLYKPI R + FN L IPK+LQ ALPF++KPK K P
Sbjct: 1135 LRLAHGVRLKANKDSLYKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPKDRR 1194
Query: 378 RRAVVMEPHERKVHVLFQQLQLIRNE 403
R AV+ EPHERK+ L L + ++
Sbjct: 1195 RPAVIREPHERKILALLDALSTVHSQ 1220
>UNIPROTKB|F1PKN2 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 CTD:9790 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950
GeneTree:ENSGT00550000074774 EMBL:AAEX03015389 EMBL:AAEX03015390
RefSeq:XP_534956.2 Ensembl:ENSCAFT00000011417 GeneID:477760
KEGG:cfa:477760 Uniprot:F1PKN2
Length = 1287
Score = 1039 (370.8 bits), Expect = 5.8e-105, P = 5.8e-105
Identities = 207/386 (53%), Positives = 269/386 (69%)
Query: 21 DQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVL 80
D +K E+ + Q+N AE D D+ R++ EGFR G Y+R+EI +VP E V FDP +P++
Sbjct: 854 DDLKGEMHKQAQLNRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVLNFDPHYPII 913
Query: 81 VGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHR 140
+GG+G E NVGY+Q+RLK+HRW+ KK+LKSRDPII S+GWRRFQTIP+Y IED +GR R
Sbjct: 914 LGGLGNSEGNVGYVQMRLKKHRWY-KKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQR 972
Query: 141 MLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKI 200
+LKYTP+HMHC ATFWGP+ P TG +AVQ++S+ FRIAAT V+L+ + +KI KK+
Sbjct: 973 LLKYTPQHMHCGATFWGPITPQGTGFLAVQSVSDIMPDFRIAATGVILDLDKSIKIVKKL 1032
Query: 201 KLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKG 260
KL G+P KIFK T+ IK MF S LEVA+ EG +RTVSGIRGQ+KKA +
Sbjct: 1033 KLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRA---------- 1082
Query: 261 GQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQP-RDK-IWQGMKTVAE 318
P EG R +FED++LMSDIVFMR W V IP FYNP+T+ L+P +K W GM+T +
Sbjct: 1083 --P-EGAFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQ 1139
Query: 319 LRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPK-DIPGRKRPLLEN 377
LR H + + NK+SLYKPI R + FN L IPK+LQ ALPF++KPK K P
Sbjct: 1140 LRLAHGVKLKPNKDSLYKPIVRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKIPKDRR 1199
Query: 378 RRAVVMEPHERKVHVLFQQLQLIRNE 403
R AV+ EPHERK+ L L + ++
Sbjct: 1200 RPAVIREPHERKILALLDALSTVHSQ 1225
>ZFIN|ZDB-GENE-060720-2 [details] [associations]
symbol:bms1l "BMS1-like, ribosome assembly protein
(yeast)" species:7955 "Danio rerio" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 ZFIN:ZDB-GENE-060720-2 GO:GO:0005525
GO:GO:0005634 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:BX248124 IPI:IPI00919984 RefSeq:NP_001104620.2
UniGene:Dr.76844 Ensembl:ENSDART00000053761
Ensembl:ENSDART00000130032 GeneID:553241 KEGG:dre:553241 CTD:553241
NextBio:20880021 Uniprot:E7F349
Length = 1221
Score = 1021 (364.5 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 201/383 (52%), Positives = 265/383 (69%)
Query: 21 DQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVL 80
D +KEE++ + ++N E D+D+ R++ EGFR G Y+R+EI VP E V FDP +P +
Sbjct: 789 DDLKEEMQKQAELNRQEFEDVDDEIRVQYEGFRPGMYVRVEIPAVPCEFVTNFDPHYPTI 848
Query: 81 VGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHR 140
+GG+G E NVGY+Q+RLK+HRW H ++LK+RDP+I+S+GWRRFQTIP+Y IED +GRHR
Sbjct: 849 LGGLGASEGNVGYLQMRLKKHRW-HNRILKTRDPLILSLGWRRFQTIPLYYIEDHNGRHR 907
Query: 141 MLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKI 200
+LKYTPEHMHC AT WGP+ P TG +AVQ + +A+FRIAAT VVL+ + V I KK+
Sbjct: 908 LLKYTPEHMHCGATIWGPITPQGTGFLAVQTIGGVKANFRIAATGVVLDLDKSVSIVKKL 967
Query: 201 KLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKG 260
KL+GYP KIFK T I+ MF + LEVA+ EG +RTVSGI+GQ+KKA + P
Sbjct: 968 KLIGYPYKIFKNTCFIQGMFNTILEVAKFEGASIRTVSGIKGQIKKALRT-----P---- 1018
Query: 261 GQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQP--RDKIWQGMKTVAE 318
P G R TFEDR+LMSDIVF+R W V +PR YNP+T+ L P + W GM+T+ +
Sbjct: 1019 --P--GAFRATFEDRLLMSDIVFLRSWYPVSVPRLYNPVTSLLMPVGQKHTWSGMRTLGQ 1074
Query: 319 LRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPKDIPGR-KRPLLEN 377
L+ + + ++SLYKPI R R FNPL IPK LQ ALPF+SKPK + + K P
Sbjct: 1075 LKHDLGIHNKPKQDSLYKPIERQVRHFNPLRIPKELQKALPFKSKPKYMQSKGKTPRDLQ 1134
Query: 378 RRAVVMEPHERKVHVLFQQLQLI 400
R AV+ EPHE+KV L L +
Sbjct: 1135 RPAVIREPHEKKVAALLDALTTV 1157
Score = 37 (18.1 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 25 EEIEFRKQMNIAELNDLDEVTRLE 48
EE+E + N E + DE T+ E
Sbjct: 407 EEVEENGKQNPTESREWDENTQRE 430
>UNIPROTKB|F1RG23 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:CU407077 Ensembl:ENSSSCT00000011164 OMA:DIAFVRT Uniprot:F1RG23
Length = 399
Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
Identities = 193/350 (55%), Positives = 246/350 (70%)
Query: 57 YLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPII 116
Y+R+EI +VP E V FDP +P+++GG+G E NVGY+Q+RLK+HRW+ KK+LKSRDPII
Sbjct: 2 YVRIEIENVPCEFVLNFDPHYPIILGGLGNSEGNVGYVQMRLKKHRWY-KKILKSRDPII 60
Query: 117 VSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQ 176
S+GWRRFQTIP+Y IED +GR R+LKYTP+HMHC ATFWGP+ P TG +A+Q++S
Sbjct: 61 FSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGATFWGPITPQGTGFLAIQSVSGIM 120
Query: 177 ASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRT 236
FRIAAT VVL+ + +KI KK+KL G+P KIFK T+ IK MF S LEVA+ EG +RT
Sbjct: 121 PDFRIAATGVVLDLDKSIKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVARFEGAVIRT 180
Query: 237 VSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFY 296
VSGIRGQ+KKA + P EG R TFED++LMSDIVFMR W V +P FY
Sbjct: 181 VSGIRGQIKKALRA------------P-EGAFRATFEDKLLMSDIVFMRTWYPVSVPAFY 227
Query: 297 NPLTTALQP-RDK-IWQGMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSL 354
NP+T+ L+P +K W GM+T +LR H + + NK+SLYKPI R + FN L IPK+L
Sbjct: 228 NPVTSLLKPVGEKDTWSGMRTTGQLRLVHGIKLKPNKDSLYKPIIRQKKHFNSLHIPKAL 287
Query: 355 QAALPFESKPK-DIPGRKRPLLENRRAVVMEPHERKVHVLFQQLQLIRNE 403
Q ALPF+SKPK K P R AV+ EPHERK+ L L + ++
Sbjct: 288 QKALPFKSKPKTQAKAGKTPKDRLRPAVIREPHERKILALLDALSTVHSQ 337
>RGD|1308043 [details] [associations]
symbol:Bms1 "BMS1 homolog, ribosome assembly protein (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1308043
InterPro:IPR007034 Pfam:PF04950 IPI:IPI00358418 EMBL:BC092659
UniGene:Rn.41094 STRING:Q561Z9 UCSC:RGD:1308043
Genevestigator:Q561Z9 Uniprot:Q561Z9
Length = 392
Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
Identities = 189/346 (54%), Positives = 241/346 (69%)
Query: 61 EIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIG 120
EI ++P E V+ FDP +P+++GG+G E VGY+Q+RLK+HRW+ KK+LKSRDP+I S+G
Sbjct: 1 EIENIPCEFVQNFDPHYPIILGGLGNSEGTVGYVQMRLKKHRWY-KKILKSRDPVIFSVG 59
Query: 121 WRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFR 180
WRRFQTIP+Y IED +GR R+LKYTP+HMHC ATFWGP+ P TG +A+Q++S FR
Sbjct: 60 WRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGATFWGPITPQGTGFLAIQSVSGAMPEFR 119
Query: 181 IAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGI 240
IAAT VVL+ + +KI KK+KL G+P KIFK T+ IK MF S LEVA+ EG +RTVSGI
Sbjct: 120 IAATGVVLDLDKSIKIVKKLKLTGFPFKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGI 179
Query: 241 RGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLT 300
RGQ+KKA + P EG R +FED++LMSDIVFMR W V IP FYNP+T
Sbjct: 180 RGQIKKALRA------------P-EGAFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVT 226
Query: 301 TALQP-RDK-IWQGMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAAL 358
+ L+P +K W GM+T +LR H + + NK+SLYKPI R + FN L IPK+LQ AL
Sbjct: 227 SLLKPVGEKDTWSGMRTTHQLRLAHGIKLKPNKDSLYKPILRQKKHFNSLHIPKALQKAL 286
Query: 359 PFESKPK-DIPGRKRPLLENRRAVVMEPHERKVHVLFQQLQLIRNE 403
PF++KPK K P R AV+ EPHERKV L L I +
Sbjct: 287 PFKNKPKTQAKAGKVPRDRQRPAVIREPHERKVLALLDALSTIHGQ 332
>DICTYBASE|DDB_G0287891 [details] [associations]
symbol:bms1l "BMS1-like ribosome biogenesis protein"
species:44689 "Dictyostelium discoideum" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0042255 "ribosome assembly" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 dictyBase:DDB_G0287891 GO:GO:0005525 GO:GO:0005739
GO:GO:0005730 GO:GO:0003924 GO:GO:0006184 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 eggNOG:COG5192 GO:GO:0006364 KO:K14569
OMA:ASYGFEM GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950
RefSeq:XP_637074.1 ProteinModelPortal:Q54JS8 STRING:Q54JS8
EnsemblProtists:DDB0234115 GeneID:8626329 KEGG:ddi:DDB_G0287891
InParanoid:Q54JS8 ProtClustDB:CLSZ2846661 Uniprot:Q54JS8
Length = 1205
Score = 942 (336.7 bits), Expect = 1.1e-94, P = 1.1e-94
Identities = 193/405 (47%), Positives = 266/405 (65%)
Query: 3 EKDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEI 62
EK AK+ Q NE ++ EE++ ++ +N E + D+ R + EGF G Y+R+E
Sbjct: 765 EKINAKY---QENEKDFQGELNEEVKRQRAINEKEFENDDQFYRQKYEGFPIGVYVRIEF 821
Query: 63 HDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWR 122
+P E EYFDP PV+VGG+ E+N+G + V LK+HRW HK++LKS DP+++S+GWR
Sbjct: 822 EKIPCEFSEYFDPKFPVVVGGLLSSEENLGMINVSLKKHRW-HKRILKSNDPLMISVGWR 880
Query: 123 RFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIA 182
RFQTI +Y+ +D +GR+RMLKYTPEHMHC A+F+GPL PP TG + N +NNQA FR++
Sbjct: 881 RFQTIVLYSTKDINGRNRMLKYTPEHMHCHASFYGPLTPPGTGFIGFTNANNNQAGFRVS 940
Query: 183 ATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRG 242
AT VL+ + + + KK+KL+G P KI KKT + MFTS LEVA+ G +RTVSGIRG
Sbjct: 941 ATGTVLDLDSSINVVKKLKLIGQPDKIMKKTCFVNGMFTSRLEVAKFVGATIRTVSGIRG 1000
Query: 243 QVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTA 302
Q+KK + P EG R TFEDR+L SDI+F+R W + RFYNP+T+
Sbjct: 1001 QIKKPL-----SHP--------EGSFRATFEDRLLPSDIIFLRTWYTITPTRFYNPVTSL 1047
Query: 303 LQPRDKIWQGMKTVAELRREHNLSIPVNKNSLYK-PIGRTPRKFNPLVIPKSLQAALPFE 361
LQ + W+GMKTV +LR E+NLS PV K+S Y+ I R +KF L IP LQ+ LPF+
Sbjct: 1048 LQEKKTHWEGMKTVGQLRFENNLSAPVKKDSSYQGKIERDEKKFKELRIPNKLQSQLPFD 1107
Query: 362 SKPKD---IPGRKRPLLENRRAVVMEPHERKVHVLFQQLQLIRNE 403
KPK I LL +R ++ EPHE++V L ++L+ I+N+
Sbjct: 1108 LKPKGTKIIKNADDALLSSRVNII-EPHEKQVADLMRRLESIKNK 1151
>ASPGD|ASPL0000005995 [details] [associations]
symbol:AN6334 species:162425 "Emericella nidulans"
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR000795
InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142 SMART:SM00785
GO:GO:0005525 GO:GO:0005739 GO:GO:0005634 GO:GO:0003924
GO:GO:0006184 GO:GO:0042254 EMBL:AACD01000107 EMBL:BN001301
eggNOG:COG5192 GO:GO:0030686 HOGENOM:HOG000166882 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950 OrthoDB:EOG4GTPN1
GO:GO:0034511 RefSeq:XP_663938.1 ProteinModelPortal:Q5AZE6
STRING:Q5AZE6 EnsemblFungi:CADANIAT00006652 GeneID:2871229
KEGG:ani:AN6334.2 Uniprot:Q5AZE6
Length = 1179
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 194/411 (47%), Positives = 256/411 (62%)
Query: 2 NEKDGAKFHCGQPNE-IG---LVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTY 57
N KD ++ +P E G D K +++ + +N AE LD +R EG+R GTY
Sbjct: 723 NSKDNSRHDGAEPEEEFGEDEWYDAQKAKMQKQADINRAEFEALDPNSRARAEGYRAGTY 782
Query: 58 LRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIV 117
R+ + VP E F+P +PV+VGG+ E GY+QVR+KRHRW HKK+LKS DP+I
Sbjct: 783 ARIVLERVPCEFSTKFNPRYPVIVGGLAPTEDRFGYVQVRIKRHRW-HKKILKSNDPLIF 841
Query: 118 SIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQA 177
S+GWRRFQT+P+Y+ D R+RMLKYTPEHMHC TF+GPL P TG VQ+ SN
Sbjct: 842 SLGWRRFQTLPMYSTSDNRTRNRMLKYTPEHMHCFGTFYGPLVAPNTGFCCVQSFSNKNP 901
Query: 178 SFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTV 237
FRIAAT VVL + +I KK+KL G KIFK TA IKDMF S LE+A+ EG +RTV
Sbjct: 902 GFRIAATGVVLSVDEHTEIVKKLKLTGVAYKIFKNTAFIKDMFNSSLEIAKFEGAAIRTV 961
Query: 238 SGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYN 297
SGIRGQ+K+A ++P +G R TFED+ILMSDIVF+R W ++ RFYN
Sbjct: 962 SGIRGQIKRAL-----SKP--------DGCFRATFEDKILMSDIVFLRAWYPIKPHRFYN 1008
Query: 298 PLTTALQPRDKI-----WQGMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPK 352
P+T L + + W+GM+ E+RRE + P+NK+S Y+ I R R FNPL +P+
Sbjct: 1009 PVTNLLDIEEGLSGDGGWKGMRLTGEVRREQGIPTPLNKDSAYRKIERPERHFNPLRVPR 1068
Query: 353 SLQAALPFESKPKDIPGRKRPLLENRRAVVMEPHERKVHVLFQQLQLIRNE 403
L A LPF+S+ + RK +RAVV+ E+K L Q+L +RNE
Sbjct: 1069 QLAAELPFKSQITRMKSRKDKTYLQKRAVVLGGEEKKARDLMQKLNTLRNE 1119
>POMBASE|SPBC31E1.06 [details] [associations]
symbol:bms1 "GTP binding protein Bms1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005730 "nucleolus" evidence=ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005819 "spindle" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0042255 "ribosome assembly"
evidence=ISS] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 PomBase:SPBC31E1.06 GO:GO:0005525
GO:GO:0005739 GO:GO:0005524 GO:GO:0005730 GO:GO:0005819
EMBL:CU329671 GO:GO:0003924 GO:GO:0006184 eggNOG:COG5192
GO:GO:0006364 HOGENOM:HOG000166882 KO:K14569 OMA:ASYGFEM
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 RefSeq:NP_595102.2
ProteinModelPortal:O94653 STRING:O94653 EnsemblFungi:SPBC31E1.06.1
GeneID:2540390 KEGG:spo:SPBC31E1.06 OrthoDB:EOG4GTPN1
NextBio:20801517 Uniprot:O94653
Length = 1121
Score = 934 (333.8 bits), Expect = 7.8e-94, P = 7.8e-94
Identities = 193/397 (48%), Positives = 254/397 (63%)
Query: 12 GQPN--EIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEM 69
G P ++ + KE+I + +N D+D +R E+EG+R GTY+R+ I+DVPFE
Sbjct: 678 GDPEKKDVDWYTEEKEKIARQLVINREAFEDMDPESRAEIEGYRAGTYVRIVINDVPFEF 737
Query: 70 VEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPV 129
VE+FD +PV+VGG+ EQ G +QVR+KRHRW HKK+LK+ DP+I S+GWRRFQ+IPV
Sbjct: 738 VEHFDSRYPVVVGGLLPNEQRYGLVQVRIKRHRW-HKKILKTNDPLIFSMGWRRFQSIPV 796
Query: 130 YAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQA---SFRIAATAV 186
Y+I D R+RMLKYTPEHMHC TF+GP P +G AVQ+++N+ A SFRIAAT
Sbjct: 797 YSISDSRTRNRMLKYTPEHMHCFGTFYGPFVAPNSGFCAVQSVANSFAKAGSFRIAATGS 856
Query: 187 VLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKK 246
VL + I KK+KL G P KIFK TA IK MF+S LEVA+ EG +RTVSGIRGQVKK
Sbjct: 857 VLNIDQSTDIVKKLKLTGVPYKIFKNTAFIKKMFSSPLEVAKFEGANIRTVSGIRGQVKK 916
Query: 247 AAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQPR 306
A +E G+ R TFED+ILMSDIVF+R W V++ +F +T L+
Sbjct: 917 AVDQEHGH-------------FRATFEDKILMSDIVFLRAWYPVQVRKFCTMVTNLLETD 963
Query: 307 DKIWQGMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPKD 366
W GM+ E+R E L P+ NS Y+ I R R FNPL +P SLQA LPF S+ K
Sbjct: 964 KTEWNGMRLTGEVRHELGLKTPLRPNSQYQEIVRPSRHFNPLKVPASLQAQLPFNSRQKA 1023
Query: 367 IPGRKRPLLENRRAVVMEPHERKVHVLFQQLQLIRNE 403
+ R +P +R V++ ERKV L Q++ + +
Sbjct: 1024 LRPRSKPTYMQKRTVLLNAEERKVRDLLQKVMTLHTD 1060
>UNIPROTKB|E9PTV4 [details] [associations]
symbol:Bms1 "Protein Bms1" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 GeneTree:ENSGT00550000074774 IPI:IPI00358418
Ensembl:ENSRNOT00000008741 ArrayExpress:E9PTV4 Uniprot:E9PTV4
Length = 1282
Score = 933 (333.5 bits), Expect = 1.0e-93, P = 1.0e-93
Identities = 190/386 (49%), Positives = 256/386 (66%)
Query: 21 DQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVL 80
D +K E++ + Q+N AE D D+ TR++ EGFR G Y+R+EI ++P E V+ FDP +P++
Sbjct: 851 DDLKGEMQRQAQLNQAEFEDQDDETRVQYEGFRPGMYVRIEIENIPCEFVQNFDPHYPII 910
Query: 81 VGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHR 140
+GG+G E VGY+Q+RLK+HRW+ KK+LKSRDP+I S+GWRRFQTIP+Y IED +GR R
Sbjct: 911 LGGLGNSEGTVGYVQMRLKKHRWY-KKILKSRDPVIFSVGWRRFQTIPLYYIEDHNGRQR 969
Query: 141 MLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKI 200
+LKYTP+HMHC ATFWGP+ P TG +A+Q++S FRIAAT VVL+ + +KI KK+
Sbjct: 970 LLKYTPQHMHCGATFWGPITPQGTGFLAIQSVSGAMPEFRIAATGVVLDLDKSIKIVKKL 1029
Query: 201 KLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKG 260
KL G+P KIFK T+ IK MF S LEVA+ EG +RTVSGIRGQ+KKA +
Sbjct: 1030 KLTGFPFKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRA---------- 1079
Query: 261 GQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQP--RDKIWQGMKTVAE 318
P EG R +FED++LMS+ VF+ W+ I FY + + L P + W ++ +
Sbjct: 1080 --P-EGAFRASFEDKLLMSEWVFIFNWSVCSIEAFYFNVKSLLNPCGSRRCWTVLRIIYY 1136
Query: 319 LRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPK-DIPGRKRPLLEN 377
L + +KNS++KPI R + FN L IPK+LQ ALPF++KPK K P
Sbjct: 1137 LLLLLGRYLECSKNSVFKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPRDRQ 1196
Query: 378 RRAVVMEPHERKVHVLFQQLQLIRNE 403
R AV+ EPHERKV L L I +
Sbjct: 1197 RPAVIREPHERKVLALLDALSTIHGQ 1222
>CGD|CAL0002359 [details] [associations]
symbol:BMS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0034511 "U3 snoRNA binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042255 "ribosome assembly" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR012948 Pfam:PF00004 Pfam:PF08142
SMART:SM00382 SMART:SM00785 CGD:CAL0002359 GO:GO:0005524
GO:GO:0005634 GO:GO:0042254 GO:GO:0035690 GO:GO:0017111
eggNOG:COG5192 EMBL:AACQ01000041 EMBL:AACQ01000040 KO:K14569
InterPro:IPR007034 Pfam:PF04950 RefSeq:XP_718522.1
RefSeq:XP_718605.1 ProteinModelPortal:Q5A9Y0 STRING:Q5A9Y0
GeneID:3639801 GeneID:3639857 KEGG:cal:CaO19.10040
KEGG:cal:CaO19.2504 Uniprot:Q5A9Y0
Length = 1210
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 165/405 (40%), Positives = 265/405 (65%)
Query: 3 EKDGAKFHCGQPNEIGLV--DQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRM 60
E++ +F P + + K ++ + ++N + ++ R+++EG+R G+Y+++
Sbjct: 758 EEEDREFGASDPEDESETWYEYQKNKMAKQLEINKVQYEEMTPEMRIKIEGYRAGSYVKI 817
Query: 61 EIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIG 120
++P E ++ FDP +P+++GG+ E G M R++RHRW HKK+LKS+DP+I+S+G
Sbjct: 818 VFDNIPCEFIDNFDPAYPLVLGGLLTTESRFGIMNARIRRHRW-HKKILKSQDPLILSLG 876
Query: 121 WRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVA--VQNLSNNQAS 178
WRRFQT+P+Y D R+RMLKYTPEH +C A+F+GPL P T V + + + +
Sbjct: 877 WRRFQTLPIYTTSDSRTRNRMLKYTPEHAYCFASFYGPLVAPNTTFVGFNIVDSKSTTGA 936
Query: 179 FRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVS 238
FR+AA+ ++ + N V+I KK+KLVGYP KIF+ TA IKDMF++ LEVA+ EG ++RTVS
Sbjct: 937 FRVAASGIIEDINSSVEIVKKLKLVGYPYKIFRNTAFIKDMFSNSLEVAKFEGAQIRTVS 996
Query: 239 GIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNP 298
GIRG++K+A ++P +G R TFED+ILMSD +F++ W V++ +FYNP
Sbjct: 997 GIRGEIKRAL-----SKP--------DGYFRATFEDKILMSDTIFLKTWYPVKVKKFYNP 1043
Query: 299 LTTALQPRDKIWQGMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAAL 358
+T+ L + W+GM+ ++R + N++ P+N +S YK + R R+FNPL +PKS+QA L
Sbjct: 1044 VTSLLLGQHSEWKGMRLTGQVRADENIATPLNVDSQYKKVERVERRFNPLKVPKSIQAEL 1103
Query: 359 PFESKPKDIPGRKRPLLENRRAVVMEPHERKVHVLFQQLQLIRNE 403
PF+S+ + +K+ ++RAVV+ E+K L Q++ IR E
Sbjct: 1104 PFKSQIHTMKPQKKKTYMSKRAVVLGGEEKKARDLMQKINSIRKE 1148
>UNIPROTKB|Q5A9Y0 [details] [associations]
symbol:BMS1 "Putative uncharacterized protein BMS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR012948 Pfam:PF00004 Pfam:PF08142
SMART:SM00382 SMART:SM00785 CGD:CAL0002359 GO:GO:0005524
GO:GO:0005634 GO:GO:0042254 GO:GO:0035690 GO:GO:0017111
eggNOG:COG5192 EMBL:AACQ01000041 EMBL:AACQ01000040 KO:K14569
InterPro:IPR007034 Pfam:PF04950 RefSeq:XP_718522.1
RefSeq:XP_718605.1 ProteinModelPortal:Q5A9Y0 STRING:Q5A9Y0
GeneID:3639801 GeneID:3639857 KEGG:cal:CaO19.10040
KEGG:cal:CaO19.2504 Uniprot:Q5A9Y0
Length = 1210
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 165/405 (40%), Positives = 265/405 (65%)
Query: 3 EKDGAKFHCGQPNEIGLV--DQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRM 60
E++ +F P + + K ++ + ++N + ++ R+++EG+R G+Y+++
Sbjct: 758 EEEDREFGASDPEDESETWYEYQKNKMAKQLEINKVQYEEMTPEMRIKIEGYRAGSYVKI 817
Query: 61 EIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIG 120
++P E ++ FDP +P+++GG+ E G M R++RHRW HKK+LKS+DP+I+S+G
Sbjct: 818 VFDNIPCEFIDNFDPAYPLVLGGLLTTESRFGIMNARIRRHRW-HKKILKSQDPLILSLG 876
Query: 121 WRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVA--VQNLSNNQAS 178
WRRFQT+P+Y D R+RMLKYTPEH +C A+F+GPL P T V + + + +
Sbjct: 877 WRRFQTLPIYTTSDSRTRNRMLKYTPEHAYCFASFYGPLVAPNTTFVGFNIVDSKSTTGA 936
Query: 179 FRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVS 238
FR+AA+ ++ + N V+I KK+KLVGYP KIF+ TA IKDMF++ LEVA+ EG ++RTVS
Sbjct: 937 FRVAASGIIEDINSSVEIVKKLKLVGYPYKIFRNTAFIKDMFSNSLEVAKFEGAQIRTVS 996
Query: 239 GIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNP 298
GIRG++K+A ++P +G R TFED+ILMSD +F++ W V++ +FYNP
Sbjct: 997 GIRGEIKRAL-----SKP--------DGYFRATFEDKILMSDTIFLKTWYPVKVKKFYNP 1043
Query: 299 LTTALQPRDKIWQGMKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAAL 358
+T+ L + W+GM+ ++R + N++ P+N +S YK + R R+FNPL +PKS+QA L
Sbjct: 1044 VTSLLLGQHSEWKGMRLTGQVRADENIATPLNVDSQYKKVERVERRFNPLKVPKSIQAEL 1103
Query: 359 PFESKPKDIPGRKRPLLENRRAVVMEPHERKVHVLFQQLQLIRNE 403
PF+S+ + +K+ ++RAVV+ E+K L Q++ IR E
Sbjct: 1104 PFKSQIHTMKPQKKKTYMSKRAVVLGGEEKKARDLMQKINSIRKE 1148
>FB|FBgn0036686 [details] [associations]
symbol:CG7728 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 GO:GO:0005634
EMBL:AE014296 GO:GO:0022008 GO:GO:0042254 eggNOG:COG5192 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950
GeneTree:ENSGT00550000074774 EMBL:AY061447 RefSeq:NP_648945.1
UniGene:Dm.3597 SMR:Q9VVC9 STRING:Q9VVC9 EnsemblMetazoa:FBtr0075274
GeneID:39904 KEGG:dme:Dmel_CG7728 UCSC:CG7728-RA
FlyBase:FBgn0036686 InParanoid:Q9VVC9 OrthoDB:EOG4ZGMT9
GenomeRNAi:39904 NextBio:816019 Uniprot:Q9VVC9
Length = 1159
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 180/386 (46%), Positives = 254/386 (65%)
Query: 21 DQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVL 80
+ +K E + + ++N +E LD R+++EG+R G Y+R+ +P E +E FD +PVL
Sbjct: 734 EDLKAEAQRQSELNKSEFAHLDNEFRIQIEGYRPGLYVRLGFKQLPAEFIENFDASYPVL 793
Query: 81 VGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYA-IEDRSGRH 139
VG + + E+NVGY+ ++K+HRW+ KK+LK+ DP+I+S+GWRRFQT+ +YA +ED R
Sbjct: 794 VGALNMTEENVGYVNCKVKKHRWY-KKILKTGDPLIISMGWRRFQTVAIYAKVEDNF-RQ 851
Query: 140 RMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQAS-----FRIAATAVVLEFNHEV 194
R LKYTP H+ C TFWGP+ P TG +A+Q + +Q FRIAAT V E +
Sbjct: 852 RYLKYTPNHVTCSMTFWGPITPQNTGFLALQTVRQDQEEMRRLGFRIAATGCVTEVDKSS 911
Query: 195 KIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGN 254
+I KK+KLVG+P KI+KKTA +KDMF S LEVA+ EG +++TVSGIRGQ+KKA +
Sbjct: 912 QIMKKLKLVGHPFKIYKKTAFVKDMFNSSLEVAKFEGAKIKTVSGIRGQIKKAH-----H 966
Query: 255 QPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQPRDKI--WQG 312
P EG R TFED+IL+SDIVF R W VE+PRFY P+++ L P D+ WQG
Sbjct: 967 TP--------EGSYRATFEDKILLSDIVFCRTWFRVEVPRFYAPVSSLLLPLDQKSQWQG 1018
Query: 313 MKTVAELRREHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPKDIPGRKR 372
MKT+ +L+RE + +S+Y I R + F PL IPK+LQ ALP++ KPK P +
Sbjct: 1019 MKTLGQLKRERAVQNAAQPDSMYTTIVRKEKIFRPLTIPKALQRALPYKDKPKLGPENPK 1078
Query: 373 PLLENRRAVVMEPHERKVHVLFQQLQ 398
LE R AVV P+E+KV + + ++
Sbjct: 1079 AALE-RVAVVNSPYEQKVSKMMKMIE 1103
>WB|WBGene00022021 [details] [associations]
symbol:Y61A9LA.10 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 GO:GO:0005525 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254
eggNOG:COG5192 HOGENOM:HOG000166882 KO:K14569 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:FO081464 RefSeq:NP_504245.3 ProteinModelPortal:Q9N306
SMR:Q9N306 STRING:Q9N306 PaxDb:Q9N306 EnsemblMetazoa:Y61A9LA.10
GeneID:178851 KEGG:cel:CELE_Y61A9LA.10 UCSC:Y61A9LA.10 CTD:178851
WormBase:Y61A9LA.10 InParanoid:Q9N306 NextBio:902832 Uniprot:Q9N306
Length = 1055
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 177/386 (45%), Positives = 248/386 (64%)
Query: 21 DQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVL 80
++ K E+ + +N +DE R ++EGFR+G Y+R+EI VP E V++FD P +
Sbjct: 623 NKAKNEMTEQADLNRQVFEGMDEEEREKVEGFRSGRYVRIEISSVPCEFVDHFDTSAPYI 682
Query: 81 VGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHR 140
+GG+ GEQN+G +Q R+KRHRW+ ++ LKSRDP+I+S GWRRFQTI +Y+++D + R R
Sbjct: 683 IGGLLPGEQNMGVVQARVKRHRWF-ERTLKSRDPLIISCGWRRFQTIAIYSVQDHNMRLR 741
Query: 141 MLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKI 200
LKYTPEHMHC A+F+GP+ TG++A+Q++++ +RI AT VL+ + ++ KK+
Sbjct: 742 FLKYTPEHMHCHASFFGPVCAQNTGLLAIQSIADKTPGYRIVATGGVLDLDKSTQVVKKL 801
Query: 201 KLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKG 260
KL+G+P KIFKKTA +K MF S LEVA+ EG +RTV+GIRGQ+KKA K
Sbjct: 802 KLIGHPEKIFKKTAFVKGMFNSALEVAKFEGATIRTVAGIRGQIKKAIKA---------- 851
Query: 261 GQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQPRDKIWQGMKTVAELR 320
P EG R TFED+ILM DIVF+R W V IPRFY P++ LQ W GM+TV ++R
Sbjct: 852 --P-EGAFRATFEDKILMRDIVFLRSWVTVPIPRFYTPISDHLQASAAAWIGMRTVGKMR 908
Query: 321 REHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPKDIPGR----KRPLLE 376
E + P NK+S YKPI R + P+ +P LQ +LPF+ KP R K L+
Sbjct: 909 SELGMGTPQNKDSDYKPIVRKEFESAPIHLPPKLQKSLPFKMKPT-YQAREEKEKDSLVA 967
Query: 377 NRRAVVMEPHERKVHVLFQQLQLIRN 402
AVV+EP E K L+ + +
Sbjct: 968 RHTAVVLEPEEAKRERFMDMLRTLND 993
>SGD|S000006138 [details] [associations]
symbol:BMS1 "GTPase required for ribosomal subunit synthesis
and rRNA processing" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0034511 "U3 snoRNA binding" evidence=IDA] [GO:0042255 "ribosome
assembly" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IEA;IDA;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;IDA;IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0030686 "90S preribosome" evidence=IDA]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 SGD:S000006138 GO:GO:0005525 GO:GO:0005739
GO:GO:0005524 GO:GO:0005730 GO:GO:0003924 EMBL:BK006949
eggNOG:COG5192 GO:GO:0030686 GO:GO:0006364 HOGENOM:HOG000166882
KO:K14569 OMA:ASYGFEM GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950
OrthoDB:EOG4GTPN1 EMBL:Z73573 PIR:S65236 RefSeq:NP_015107.1
ProteinModelPortal:Q08965 SMR:Q08965 DIP:DIP-6562N IntAct:Q08965
MINT:MINT-647500 STRING:Q08965 PaxDb:Q08965 PeptideAtlas:Q08965
PRIDE:Q08965 EnsemblFungi:YPL217C GeneID:855884 KEGG:sce:YPL217C
CYGD:YPL217c GeneTree:ENSGT00550000074774 NextBio:980544
Genevestigator:Q08965 GermOnline:YPL217C GO:GO:0034511
Uniprot:Q08965
Length = 1183
Score = 806 (288.8 bits), Expect = 7.7e-80, P = 7.7e-80
Identities = 163/379 (43%), Positives = 238/379 (62%)
Query: 24 KEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGG 83
K +I + ++N E ++ R +EGF+ G+Y+R+ VP E V+ F+P P+++GG
Sbjct: 755 KAKISKQLEINNIEYQEMTPEQRQRIEGFKAGSYVRIVFEKVPMEFVKNFNPKFPIVMGG 814
Query: 84 IGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLK 143
+ E G ++ RL+RHRW HKK+LK+ DP+++S+GWRRFQT+P+Y D R RMLK
Sbjct: 815 LLPTEIKFGIVKARLRRHRW-HKKILKTNDPLVLSLGWRRFQTLPIYTTTDSRTRTRMLK 873
Query: 144 YTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQAS--FRIAATAVVLEFNHEVKIKKKIK 201
YTPEH +C A F+GPL P T VQ ++N+ FRIAAT +V E + ++I KK+K
Sbjct: 874 YTPEHTYCNAAFYGPLCSPNTPFCGVQIVANSDTGNGFRIAATGIVEEIDVNIEIVKKLK 933
Query: 202 LVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGG 261
LVG+P KIFK TA IKDMF+S +EVA+ EG +++TVSGIRG++K+A ++P
Sbjct: 934 LVGFPYKIFKNTAFIKDMFSSAMEVARFEGAQIKTVSGIRGEIKRAL-----SKP----- 983
Query: 262 QPREGIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQPRDKIWQGMKTVAELRR 321
EG R FED+ILMSDIV +R W V + +FYNP+T+ L W+G++ ++R
Sbjct: 984 ---EGHYRAAFEDKILMSDIVILRSWYPVRVKKFYNPVTSLLLKEKTEWKGLRLTGQIRA 1040
Query: 322 EHNLSIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPKDIPGRKRPLLENRRAV 381
NL P N +S Y I R R FN L +PK++Q LPF+S+ + +K+ +RAV
Sbjct: 1041 AMNLETPSNPDSAYHKIERVERHFNGLKVPKAVQKELPFKSQIHQMKPQKKKTYMAKRAV 1100
Query: 382 VMEPHERKVHVLFQQLQLI 400
V+ E+K Q++ I
Sbjct: 1101 VLGGDEKKARSFIQKVLTI 1119
>GENEDB_PFALCIPARUM|PFA0330w [details] [associations]
symbol:AARP2 "pfAARP2 protein" species:5833
"Plasmodium falciparum" [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 GO:GO:0005525 GO:GO:0005886 GO:GO:0005634
GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
InterPro:IPR007034 Pfam:PF04950 EMBL:AL844501
GenomeReviews:AL844501_GR RefSeq:XP_001350998.1
ProteinModelPortal:Q8I275 IntAct:Q8I275 MINT:MINT-1623490
EnsemblProtists:PFA0330w:mRNA GeneID:813203 KEGG:pfa:PFA_0330w
HOGENOM:HOG000065791 ProtClustDB:CLSZ2514882 Uniprot:Q8I275
Length = 1434
Score = 472 (171.2 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 112/300 (37%), Positives = 178/300 (59%)
Query: 2 NEKDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRT----GTY 57
N KD K + G NEI + + +K+ ++ K + + + +++ L G+ + G Y
Sbjct: 1001 NLKDKDKGNIG--NEINIKENLKK-LKEEKLIEKEKFRETEKIGVLN-SGYGSSVNIGEY 1056
Query: 58 LRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIV 117
+R+E++ ++ + + ++ GGI E+ + R+K+HRW+ K+L+S DP+I
Sbjct: 1057 VRIELNIEKKKLAILKN--NLIICGGIQTYEEKDSLIHCRIKKHRWF-PKLLRSNDPLIF 1113
Query: 118 SIGWRRFQTIPVYAIEDRSG-RHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQ 176
S+GWRR+Q+IP+Y+I +R+ R R LKYT EHMHC TF+GPLA +G++A+ N
Sbjct: 1114 SVGWRRYQSIPIYSISERNNVRLRYLKYTTEHMHCNCTFYGPLASVNSGILALYNYKK-V 1172
Query: 177 ASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRT 236
+RI +++E N+ + I KK+KL+G P KIFK TA +K+MF SDLEV + V T
Sbjct: 1173 PFYRICINGLIIETNNNLNIMKKLKLIGEPYKIFKNTAFVKNMFNSDLEVCKFLNCPVVT 1232
Query: 237 VSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFY 296
SGI+G +K +I N G RCTF D+I MSDIV ++ + +V+I +FY
Sbjct: 1233 PSGIKGLIKN----KINNN----------GDFRCTFADKIRMSDIVILKLYVNVKIKKFY 1278
Score = 122 (48.0 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 38/100 (38%), Positives = 53/100 (53%)
Query: 266 GIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQPRDKIWQGMKTVAELRREHNL 325
G RCTF D+I MSDIV ++ + +V+I +FY +KI K++ ELR +N
Sbjct: 1248 GDFRCTFADKIRMSDIVILKLYVNVKIKKFYY-----FDIENKI----KSINELRYLYN- 1297
Query: 326 SIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPK 365
I VN N+ Y+ I + I L LPF+SKPK
Sbjct: 1298 -IYVNHNNNYRSIPFRHFYHTKIQIKSKLLKDLPFKSKPK 1336
>UNIPROTKB|Q8I275 [details] [associations]
symbol:AARP2 "PfAARP2 protein" species:36329 "Plasmodium
falciparum 3D7" [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 GO:GO:0005525 GO:GO:0005886 GO:GO:0005634
GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
InterPro:IPR007034 Pfam:PF04950 EMBL:AL844501
GenomeReviews:AL844501_GR RefSeq:XP_001350998.1
ProteinModelPortal:Q8I275 IntAct:Q8I275 MINT:MINT-1623490
EnsemblProtists:PFA0330w:mRNA GeneID:813203 KEGG:pfa:PFA_0330w
HOGENOM:HOG000065791 ProtClustDB:CLSZ2514882 Uniprot:Q8I275
Length = 1434
Score = 472 (171.2 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 112/300 (37%), Positives = 178/300 (59%)
Query: 2 NEKDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRT----GTY 57
N KD K + G NEI + + +K+ ++ K + + + +++ L G+ + G Y
Sbjct: 1001 NLKDKDKGNIG--NEINIKENLKK-LKEEKLIEKEKFRETEKIGVLN-SGYGSSVNIGEY 1056
Query: 58 LRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIV 117
+R+E++ ++ + + ++ GGI E+ + R+K+HRW+ K+L+S DP+I
Sbjct: 1057 VRIELNIEKKKLAILKN--NLIICGGIQTYEEKDSLIHCRIKKHRWF-PKLLRSNDPLIF 1113
Query: 118 SIGWRRFQTIPVYAIEDRSG-RHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNLSNNQ 176
S+GWRR+Q+IP+Y+I +R+ R R LKYT EHMHC TF+GPLA +G++A+ N
Sbjct: 1114 SVGWRRYQSIPIYSISERNNVRLRYLKYTTEHMHCNCTFYGPLASVNSGILALYNYKK-V 1172
Query: 177 ASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRT 236
+RI +++E N+ + I KK+KL+G P KIFK TA +K+MF SDLEV + V T
Sbjct: 1173 PFYRICINGLIIETNNNLNIMKKLKLIGEPYKIFKNTAFVKNMFNSDLEVCKFLNCPVVT 1232
Query: 237 VSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWADVEIPRFY 296
SGI+G +K +I N G RCTF D+I MSDIV ++ + +V+I +FY
Sbjct: 1233 PSGIKGLIKN----KINNN----------GDFRCTFADKIRMSDIVILKLYVNVKIKKFY 1278
Score = 122 (48.0 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 38/100 (38%), Positives = 53/100 (53%)
Query: 266 GIARCTFEDRILMSDIVFMRGWADVEIPRFYNPLTTALQPRDKIWQGMKTVAELRREHNL 325
G RCTF D+I MSDIV ++ + +V+I +FY +KI K++ ELR +N
Sbjct: 1248 GDFRCTFADKIRMSDIVILKLYVNVKIKKFYY-----FDIENKI----KSINELRYLYN- 1297
Query: 326 SIPVNKNSLYKPIGRTPRKFNPLVIPKSLQAALPFESKPK 365
I VN N+ Y+ I + I L LPF+SKPK
Sbjct: 1298 -IYVNHNNNYRSIPFRHFYHTKIQIKSKLLKDLPFKSKPK 1336
>UNIPROTKB|E2QYA6 [details] [associations]
symbol:E2QYA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 GeneTree:ENSGT00550000074945 EMBL:AAEX03006702
Ensembl:ENSCAFT00000030599 Uniprot:E2QYA6
Length = 656
Score = 259 (96.2 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 69/257 (26%), Positives = 130/257 (50%)
Query: 43 EVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHR 102
E+ E+EG G Y+ + + +VP +VEYF P++ + EQ + + + + RH
Sbjct: 395 EIEEKEVEGAEVGWYVTLHVSEVPLSVVEYFKRGAPLIAFSLLPHEQKMSVLNMVVSRHP 454
Query: 103 WWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPP 162
+ + +K+++ +I G+RRF+ P+++ + +H+ ++ + + T +GP+ P
Sbjct: 455 G-NIEPVKAKEDLIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADVALVVTIYGPITFP 513
Query: 163 QTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTS 222
V+ + SN S + AT +L + + + K+I L G+P KIF K A+++ MF S
Sbjct: 514 PASVLLFKQNSNGMHS--LIATGYLLSVDPDRMVIKRIVLSGHPFKIFTKMAVVRYMFFS 571
Query: 223 DLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIV 282
+V + E+RT G RG +K E +G G +C+F+ ++ D V
Sbjct: 572 REDVLWFKPVELRTKWGRRGHIK----EPLGTH----------GHMKCSFDGKLKSQDTV 617
Query: 283 FMRGWADVEIPRF-YNP 298
M + V P++ Y+P
Sbjct: 618 LMNLYKRV-FPKWTYDP 633
>UNIPROTKB|J9NS98 [details] [associations]
symbol:TSR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 KO:K14799 OMA:DAEQTWP GeneTree:ENSGT00550000074945
EMBL:AAEX03008382 RefSeq:XP_852531.1 Ensembl:ENSCAFT00000003327
GeneID:610048 KEGG:cfa:610048 Uniprot:J9NS98
Length = 801
Score = 259 (96.2 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 69/257 (26%), Positives = 130/257 (50%)
Query: 43 EVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHR 102
E+ E+EG G Y+ + + +VP +VEYF P++ + EQ + + + + RH
Sbjct: 540 EIEEKEVEGAEVGWYVTLHVSEVPLSVVEYFKRGAPLIAFSLLPHEQKMSVLNMVVSRHP 599
Query: 103 WWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPP 162
+ + +K+++ +I G+RRF+ P+++ + +H+ ++ + + T +GP+ P
Sbjct: 600 G-NIEPVKAKEDLIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADVALVVTIYGPITFP 658
Query: 163 QTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTS 222
V+ + SN S + AT +L + + + K+I L G+P KIF K A+++ MF S
Sbjct: 659 PASVLLFKQNSNGMHS--LIATGYLLSVDPDRMVIKRIVLSGHPFKIFTKMAVVRYMFFS 716
Query: 223 DLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIV 282
+V + E+RT G RG +K E +G G +C+F+ ++ D V
Sbjct: 717 REDVLWFKPVELRTKWGRRGHIK----EPLGTH----------GHMKCSFDGKLKSQDTV 762
Query: 283 FMRGWADVEIPRF-YNP 298
M + V P++ Y+P
Sbjct: 763 LMNLYKRV-FPKWTYDP 778
>UNIPROTKB|F1MSR6 [details] [associations]
symbol:TSR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 OMA:DAEQTWP GeneTree:ENSGT00550000074945
EMBL:DAAA02048673 EMBL:DAAA02048672 IPI:IPI00867224
Ensembl:ENSBTAT00000005534 ArrayExpress:F1MSR6 Uniprot:F1MSR6
Length = 804
Score = 246 (91.7 bits), Expect = 8.1e-18, P = 8.1e-18
Identities = 66/257 (25%), Positives = 129/257 (50%)
Query: 43 EVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHR 102
E+ E+EG G Y+ + + +VP +VE+F P++ + EQ + + + + RH
Sbjct: 543 EIEEKEVEGAEVGWYVTLHVSEVPVSVVEHFKRGTPLIAFSLLPHEQKMSVLNMVVSRHP 602
Query: 103 WWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPP 162
+ + +K+++ +I G+RRF+ P+++ + +H+ ++ + T + P+ P
Sbjct: 603 G-NTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADTALVVTVYAPITFP 661
Query: 163 QTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTS 222
V+ + SN S + AT +L + + + K++ L G+P KIF KTA+++ MF +
Sbjct: 662 PASVLLFKQNSNGMHS--LIATGHLLSVDPDRMVIKRVVLSGHPFKIFTKTAVVRYMFFN 719
Query: 223 DLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIV 282
+V + E+RT G RG +K E +G G +C+F+ ++ D V
Sbjct: 720 REDVLWFKPVELRTKWGRRGHIK----EPLGTH----------GHMKCSFDGKLKSQDTV 765
Query: 283 FMRGWADVEIPRF-YNP 298
M + V P++ Y+P
Sbjct: 766 LMNLYKRV-FPKWTYDP 781
>UNIPROTKB|Q2NL82 [details] [associations]
symbol:TSR1 "Pre-rRNA-processing protein TSR1 homolog"
species:9606 "Homo sapiens" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 EMBL:CH471108 GO:GO:0005730
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177
HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP EMBL:AB037822
EMBL:BC019090 EMBL:BC110851 EMBL:BC126110 EMBL:AK001396
IPI:IPI00292894 RefSeq:NP_060598.3 UniGene:Hs.388170
ProteinModelPortal:Q2NL82 IntAct:Q2NL82 MINT:MINT-4860330
STRING:Q2NL82 PhosphoSite:Q2NL82 DMDM:121948971 PaxDb:Q2NL82
PeptideAtlas:Q2NL82 PRIDE:Q2NL82 DNASU:55720
Ensembl:ENST00000301364 GeneID:55720 KEGG:hsa:55720 UCSC:uc002fuj.3
CTD:55720 GeneCards:GC17M002225 HGNC:HGNC:25542 HPA:HPA024434
MIM:611214 neXtProt:NX_Q2NL82 PharmGKB:PA142670691
HOVERGEN:HBG099515 InParanoid:Q2NL82 OrthoDB:EOG4MKNFQ
GenomeRNAi:55720 NextBio:60619 PMAP-CutDB:Q2NL82 Bgee:Q2NL82
CleanEx:HS_TSR1 Genevestigator:Q2NL82 Uniprot:Q2NL82
Length = 804
Score = 237 (88.5 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 65/256 (25%), Positives = 127/256 (49%)
Query: 43 EVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHR 102
EV E+EG G Y+ + + +VP +VE F P++ + EQ + + + ++R
Sbjct: 543 EVEEKEVEGAEVGWYVTLHVSEVPVSVVECFRQGTPLIAFSLLPHEQKMSVLNMVVRRDP 602
Query: 103 WWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPP 162
+ + +K+++ +I G+RRF+ P+++ + +H++ ++ M +AT + P+ P
Sbjct: 603 G-NTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKLQRFLTADMALVATVYAPITFP 661
Query: 163 QTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTS 222
V+ + SN S + AT ++ + + + K++ L G+P KIF K A+++ MF +
Sbjct: 662 PASVLLFKQKSNGMHS--LIATGHLMSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFN 719
Query: 223 DLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIV 282
+V + E+RT G RG +K E +G G +C+F+ ++ D V
Sbjct: 720 REDVLWFKPVELRTKWGRRGHIK----EPLGTH----------GHMKCSFDGKLKSQDTV 765
Query: 283 FMRGWADVEIPRFYNP 298
M + V Y+P
Sbjct: 766 LMNLYKRVFPKWTYDP 781
>UNIPROTKB|Q5R434 [details] [associations]
symbol:TSR1 "Pre-rRNA-processing protein TSR1 homolog"
species:9601 "Pongo abelii" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 GO:GO:0005730 GO:GO:0042255
InterPro:IPR007034 Pfam:PF04950 KO:K14799 CTD:55720
HOVERGEN:HBG099515 EMBL:CR861426 RefSeq:NP_001127041.1
UniGene:Pab.787 GeneID:100174068 KEGG:pon:100174068 Uniprot:Q5R434
Length = 805
Score = 234 (87.4 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 64/256 (25%), Positives = 126/256 (49%)
Query: 43 EVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHR 102
EV E+EG G Y+ + + +VP +VE F P++ + EQ + + + ++R
Sbjct: 544 EVEEKEVEGAEVGCYVTLHVSEVPVSVVECFRQGTPLIAFSLLPHEQKMSVLNMVVRRDP 603
Query: 103 WWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPP 162
+ + +K+++ +I G+RRF+ P+++ + +H++ ++ M +AT + P+ P
Sbjct: 604 G-NTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKLQRFLTADMALVATVYAPITFP 662
Query: 163 QTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTS 222
V+ + SN S + AT ++ + + + K++ L G+P K+F K A+++ MF +
Sbjct: 663 PASVLLFKQKSNGMHS--LIATGHLMSVDPDRMVIKRVVLSGHPLKMFTKMAVVRYMFFN 720
Query: 223 DLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIV 282
+V + E+RT G RG +K E +G G +C+F ++ D V
Sbjct: 721 REDVLWFKPVELRTKWGRRGHIK----EPLGTH----------GHMKCSFNGKLKSQDTV 766
Query: 283 FMRGWADVEIPRFYNP 298
M + V Y+P
Sbjct: 767 LMNLYKRVFPKWTYDP 782
>MGI|MGI:2144566 [details] [associations]
symbol:Tsr1 "TSR1 20S rRNA accumulation" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 MGI:MGI:2144566 GO:GO:0005730
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 EMBL:AL604066
UniGene:Mm.220843 eggNOG:COG5177 KO:K14799 OMA:DAEQTWP
GeneTree:ENSGT00550000074945 CTD:55720 HOVERGEN:HBG099515
OrthoDB:EOG4MKNFQ EMBL:AK030545 EMBL:AK134365 EMBL:AK154063
EMBL:AK162686 EMBL:AK165662 EMBL:BC031531 EMBL:AK129350
IPI:IPI00420546 IPI:IPI00875206 IPI:IPI00875360 RefSeq:NP_796299.2
ProteinModelPortal:Q5SWD9 IntAct:Q5SWD9 STRING:Q5SWD9
PhosphoSite:Q5SWD9 PaxDb:Q5SWD9 PRIDE:Q5SWD9
Ensembl:ENSMUST00000045807 GeneID:104662 KEGG:mmu:104662
UCSC:uc007kcm.1 UCSC:uc007kcn.1 UCSC:uc007kco.1 InParanoid:Q5SWD9
NextBio:357196 Bgee:Q5SWD9 CleanEx:MM_TSR1 Genevestigator:Q5SWD9
Uniprot:Q5SWD9
Length = 803
Score = 229 (85.7 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 64/257 (24%), Positives = 125/257 (48%)
Query: 43 EVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHR 102
E+ E EG G Y+ + + DVP +VEYF P++ + EQ + + + + R+
Sbjct: 542 EIEEKEAEGAEVGWYVTLHVSDVPVSVVEYFRQGAPLIAFSLLPYEQKMSVLNMVVSRNP 601
Query: 103 WWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPP 162
+ + +K+++ +I G+RRF+ P+++ + +H+ ++ + T + P+ P
Sbjct: 602 G-NTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADAAFVVTVFAPITFP 660
Query: 163 QTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTS 222
V+ + N S + AT + + + + K++ L G+P KIF K A+++ MF +
Sbjct: 661 PASVLLFKQRRNGMHS--LIATGHLFSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFN 718
Query: 223 DLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIV 282
+V + E+RT G RG +K E +G G +C+F+ ++ D V
Sbjct: 719 REDVMWFKPVELRTKWGRRGHIK----EPLGTH----------GHMKCSFDGKLKSQDTV 764
Query: 283 FMRGWADVEIPRF-YNP 298
M + V P++ Y+P
Sbjct: 765 LMNLYKRV-FPKWTYDP 780
>UNIPROTKB|F1PXP0 [details] [associations]
symbol:F1PXP0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 GeneTree:ENSGT00550000074945 EMBL:AAEX03006702
Ensembl:ENSCAFT00000030598 OMA:THEVERF Uniprot:F1PXP0
Length = 725
Score = 222 (83.2 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 50/184 (27%), Positives = 98/184 (53%)
Query: 43 EVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHR 102
E+ E+EG G Y+ + + +VP +VEYF P++ + EQ + + + + RH
Sbjct: 543 EIEEKEVEGAEVGWYVTLHVSEVPLSVVEYFKRGAPLIAFSLLPHEQKMSVLNMVVSRHP 602
Query: 103 WWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPP 162
+ + +K+++ +I G+RRF+ P+++ + +H+ ++ + + T +GP+ P
Sbjct: 603 G-NIEPVKAKEDLIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADVALVVTIYGPITFP 661
Query: 163 QTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTS 222
V+ + SN S + AT +L + + + K+I L G+P KIF K A+++ MF S
Sbjct: 662 PASVLLFKQNSNGMHS--LIATGYLLSVDPDRMVIKRIVLSGHPFKIFTKMAVVRYMFFS 719
Query: 223 DLEV 226
+V
Sbjct: 720 REDV 723
>RGD|2322150 [details] [associations]
symbol:Tsr1 "TSR1, 20S rRNA accumulation, homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
RGD:2322150 GO:GO:0005634 GO:GO:0042254 EMBL:CH473948
InterPro:IPR007034 Pfam:PF04950 KO:K14799 OMA:DAEQTWP
GeneTree:ENSGT00550000074945 CTD:55720 OrthoDB:EOG4MKNFQ
IPI:IPI00370294 RefSeq:XP_002724564.1 RefSeq:XP_002727820.1
UniGene:Rn.101331 Ensembl:ENSRNOT00000003992 GeneID:100360406
KEGG:rno:100360406 Uniprot:D3ZEM8
Length = 804
Score = 222 (83.2 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 64/257 (24%), Positives = 124/257 (48%)
Query: 43 EVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHR 102
E+ E EG G Y+ + + +VP +VE F P++ + EQ + + + + R
Sbjct: 543 EIEEKETEGAEVGWYVTLHVSNVPVSVVESFRQGAPLIAFSLLPYEQKMSVLNMVVSRSP 602
Query: 103 WWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPP 162
+ + +K+++ +I G+RRF+ P+++ + +H+ ++ + T + P+ P
Sbjct: 603 G-NTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADAALVVTVFAPITFP 661
Query: 163 QTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTS 222
V+ + N S + AT + + + + K++ L G+P KIF KTA+++ MF S
Sbjct: 662 PASVLLFKQRRNGMHS--LIATGHLFSVDPDRMVIKRVVLSGHPFKIFTKTAVVRYMFFS 719
Query: 223 DLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIV 282
+V + E+RT G RG +K E +G G +C+F+ ++ D V
Sbjct: 720 RDDVLWFKPVELRTKWGRRGHIK----EPLGTH----------GHMKCSFDGKLKSQDTV 765
Query: 283 FMRGWADVEIPRF-YNP 298
M + V P++ Y+P
Sbjct: 766 LMNLYKRV-FPKWTYDP 781
>UNIPROTKB|Q5XGY1 [details] [associations]
symbol:tsr1 "Pre-rRNA-processing protein TSR1 homolog"
species:8355 "Xenopus laevis" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 GO:GO:0005730 GO:GO:0042255
InterPro:IPR007034 Pfam:PF04950 KO:K14799 CTD:55720
HOVERGEN:HBG099515 EMBL:BC084296 RefSeq:NP_001088282.1
UniGene:Xl.8091 ProteinModelPortal:Q5XGY1 PRIDE:Q5XGY1
GeneID:495115 KEGG:xla:495115 Xenbase:XB-GENE-5753645
Uniprot:Q5XGY1
Length = 815
Score = 221 (82.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 63/250 (25%), Positives = 123/250 (49%)
Query: 50 EGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVL 109
EG G Y+ + I VP ++E+F P+++ + EQ + M + ++RH + + +
Sbjct: 561 EGAMVGWYVTVHISAVPVSVMEHFKHGLPLVLCSLLPHEQKMSVMNMLVRRHPG-NNEPI 619
Query: 110 KSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAV 169
K+++ +I G+RRF+ P+++ + +H+ ++ + T + P+ P V+
Sbjct: 620 KAKEELIFHCGFRRFRASPLFSQHSSADKHKSERFLRSDTSVVVTVYAPITFPPASVLVF 679
Query: 170 QNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQC 229
+ N + AT +L N + + K+I L G+P KI K+TA+++ MF + +V
Sbjct: 680 KQRYNGMQD--LVATGSLLNVNPDRIVIKRIVLSGHPFKIMKRTAVVRYMFFNREDVLWF 737
Query: 230 EGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGWAD 289
+ E+RT G RG +K E +G G +C F+ ++ D V M +
Sbjct: 738 KPVELRTKWGRRGHIK----EPLGTH----------GHMKCHFDGQLKSQDTVLMNLYKR 783
Query: 290 VEIPRF-YNP 298
V P++ ++P
Sbjct: 784 V-YPKWTFDP 792
>ZFIN|ZDB-GENE-030131-3762 [details] [associations]
symbol:tsr1 "TSR1, 20S rRNA accumulation, homolog
(yeast)" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
ZFIN:ZDB-GENE-030131-3762 GO:GO:0005634 GO:GO:0042254
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074945
EMBL:CT027805 IPI:IPI00817275 PRIDE:E7FCX4
Ensembl:ENSDART00000052645 ArrayExpress:E7FCX4 Bgee:E7FCX4
Uniprot:E7FCX4
Length = 836
Score = 216 (81.1 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 61/252 (24%), Positives = 124/252 (49%)
Query: 48 ELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKK 107
E +G G Y+ + I DVP ++E F P+++ + EQ + M V +++H + +
Sbjct: 580 EEDGAMVGWYVTLHIVDVPPSVMESFQTGKPLVLVSLLPHEQKMSVMNVLVRQHPS-NTE 638
Query: 108 VLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVV 167
+KS++ ++ G+RRF+ +++ +H++ ++ + +F+ P+ P GV+
Sbjct: 639 PIKSKEELVFQCGFRRFRASAIFSQHTTGDKHKLERFLRPDAPTIMSFYAPITFPTAGVL 698
Query: 168 AVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVA 227
+ N + AT +L + + K+I L G+P KI +++A+++ MF + ++
Sbjct: 699 VFKQRDNGMQD--LVATGSLLSCDPRRVVLKRIVLSGHPFKINRRSAVVRYMFFNRDDIL 756
Query: 228 QCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFMRGW 287
+ E+RT G RG +K+A +G G +C F+ ++ D V M +
Sbjct: 757 WFKPVELRTKWGRRGHIKEA----LGTH----------GHMKCVFDSQLRSQDTVLMNLY 802
Query: 288 ADVEIPRF-YNP 298
V P + Y+P
Sbjct: 803 KRV-YPHWTYDP 813
>UNIPROTKB|F1NNP8 [details] [associations]
symbol:LOC100857289 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 OMA:DAEQTWP GeneTree:ENSGT00550000074945
EMBL:AADN02025881 IPI:IPI00574494 Ensembl:ENSGALT00000005046
Uniprot:F1NNP8
Length = 803
Score = 214 (80.4 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 63/261 (24%), Positives = 127/261 (48%)
Query: 39 NDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRL 98
N ++ + E EG G Y+ + + +VP ++E F P+++ + EQ + + +
Sbjct: 538 NIFRQIEKEETEGASVGWYVTLHVCNVPVSVMESFKEGKPLVLFSLLPHEQKMSVLNFLV 597
Query: 99 KRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGP 158
+RH + +K+++ +I G+RRF+ P+++ + +H++ ++ + T + P
Sbjct: 598 RRHPS-NSDPVKAKEELIFHCGFRRFRASPLFSQHTSADKHKLERFLRLDAALVVTVYAP 656
Query: 159 LAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKD 218
+ P V+ + SN + AT +L + + I K++ L G+P KIF K A+++
Sbjct: 657 ITFPPASVLVFKQRSNGMHD--LIATGSLLAVDPDRIIIKRLVLSGHPFKIFTKAAVVRY 714
Query: 219 MFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILM 278
MF + +V + E+RT G RG +K E +G G +C F+ ++
Sbjct: 715 MFFNREDVMWFKPVELRTKWGRRGHIK----EPLGTH----------GHMKCHFDGQLKS 760
Query: 279 SDIVFMRGWADVEIPRF-YNP 298
D V + + V P++ Y+P
Sbjct: 761 QDTVLLNLYKRV-YPKWTYDP 780
>FB|FBgn0037073 [details] [associations]
symbol:CG7338 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 EMBL:AE014296
GO:GO:0005730 GO:GO:0022008 GO:GO:0042255 InterPro:IPR007034
Pfam:PF04950 eggNOG:COG5177 KO:K14799 OMA:DAEQTWP
GeneTree:ENSGT00550000074945 EMBL:BT003192 EMBL:BT044092
EMBL:AY058591 RefSeq:NP_649304.1 UniGene:Dm.1034
ProteinModelPortal:Q9VP47 IntAct:Q9VP47 MINT:MINT-823454
STRING:Q9VP47 PaxDb:Q9VP47 PRIDE:Q9VP47 EnsemblMetazoa:FBtr0078342
GeneID:40360 KEGG:dme:Dmel_CG7338 UCSC:CG7338-RA
FlyBase:FBgn0037073 InParanoid:Q9VP47 OrthoDB:EOG4QFTVF
PhylomeDB:Q9VP47 GenomeRNAi:40360 NextBio:818374 Bgee:Q9VP47
Uniprot:Q9VP47
Length = 814
Score = 184 (69.8 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 63/241 (26%), Positives = 111/241 (46%)
Query: 48 ELEGFRTGTYLRMEIHDVPFEMVEYFDPCH---PVLVGGIGLGEQNVGYMQVRLKRHRWW 104
E EG G Y+ + + +VP F ++V G+ E + M V L+R
Sbjct: 551 EFEGVLPGLYVTLYVINVPESRWNAFKSAQLMDNIIVYGMLPHEHQMCVMNVVLQRMP-- 608
Query: 105 HKKV-LKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQ 163
+V LKS++ +I+ G+RRF P+Y+ +H+ +Y + ATF+ P+ P
Sbjct: 609 DSEVPLKSKEQLIIQCGYRRFVVNPIYSQHTNGDKHKFERYFRPYETVCATFYAPIQFPP 668
Query: 164 TGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSD 223
V+A + N ++ + A +L N + + K++ L G+P +I +K+A I+ MF
Sbjct: 669 APVLAFK--VNPDSTLALVARGRLLSCNPDRIVLKRVVLSGHPMRINRKSASIRYMFFYK 726
Query: 224 LEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVF 283
+V + ++RT G G +K E +G G +C F+ ++ D F
Sbjct: 727 EDVEYFKPVKLRTKCGRLGHIK----ESLGTH----------GHMKCYFDGQLRSYDTAF 772
Query: 284 M 284
M
Sbjct: 773 M 773
>TAIR|locus:2035893 [details] [associations]
symbol:AT1G42440 "AT1G42440" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0042254
InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177 HOGENOM:HOG000165026
KO:K14799 OMA:DAEQTWP EMBL:AF361826 EMBL:AY133551 EMBL:BT000755
IPI:IPI00527453 RefSeq:NP_564480.1 UniGene:At.19120
UniGene:At.67019 ProteinModelPortal:Q9ASU6 IntAct:Q9ASU6
STRING:Q9ASU6 PaxDb:Q9ASU6 PRIDE:Q9ASU6 EnsemblPlants:AT1G42440.1
GeneID:840848 KEGG:ath:AT1G42440 TAIR:At1g42440 InParanoid:Q9ASU6
PhylomeDB:Q9ASU6 ProtClustDB:CLSN2688391 ArrayExpress:Q9ASU6
Genevestigator:Q9ASU6 Uniprot:Q9ASU6
Length = 793
Score = 181 (68.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 58/235 (24%), Positives = 112/235 (47%)
Query: 55 GTYLRMEIHDVPF----EMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLK 110
G+Y+R+ I +VP ++ + P++ G+ E + + +K++ + + K
Sbjct: 556 GSYVRLHIKEVPLGAASKLSSLVNTTKPIIGFGLLQHESKMSVLHFSVKKYDGYEAPI-K 614
Query: 111 SRDPIIVSIGWRRFQTIPVYAIED-RSGRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAV 169
+++ ++ +G+R+F PV+A ++ S +H+M ++ LA+ +GP++ P +V +
Sbjct: 615 TKEELMFHVGFRQFIARPVFATDNFSSDKHKMERFLHPGCFSLASIYGPISFPPLPLVVL 674
Query: 170 QNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQC 229
+ +S IAA + I KKI L GYP ++ K A ++ MF + +V
Sbjct: 675 K-ISEGSDPPAIAALGSLKSVEPNKIILKKIILTGYPQRVSKMKASVRYMFHNPEDVKWF 733
Query: 230 EGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFM 284
+ EV + G RG+VK E +G G +C F + D+V M
Sbjct: 734 KPVEVWSKCGRRGRVK----EPVGTH----------GAMKCIFNGVVQQHDVVCM 774
>POMBASE|SPAC23H4.15 [details] [associations]
symbol:SPAC23H4.15 "ribosome biogenesis protein Tsr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
[GO:0043021 "ribonucleoprotein complex binding" evidence=ISO]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 PomBase:SPAC23H4.15
GO:GO:0005737 EMBL:CU329670 GO:GO:0005730 GO:GO:0043021
GO:GO:0006364 InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177
HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP PIR:T38313
RefSeq:NP_593391.1 STRING:O13956 EnsemblFungi:SPAC23H4.15.1
GeneID:2541779 KEGG:spo:SPAC23H4.15 OrthoDB:EOG4BS0TS
NextBio:20802869 Uniprot:O13956
Length = 783
Score = 170 (64.9 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 58/237 (24%), Positives = 109/237 (45%)
Query: 53 RTGTYLRMEIHDVPFEMVEYFD-PCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKS 111
+ G + +E+ +VP E+ EY++ P + +++ + E + Q +H + + + +S
Sbjct: 543 KPGKAVYVELRNVPIEIFEYYNKPWNLLVLYSLLQYENKLTVSQFTAMQHSEYEEPI-ES 601
Query: 112 RDPIIVSIGWRRFQTIPVYAIEDRSGRHRML----KYTPEHMHCLATFWGPLAPPQTGVV 167
++ +++ IG RRF P+Y+ SG L +Y P +A+ P+ ++
Sbjct: 602 KEELLLQIGPRRFMVRPLYSDPTASGASNNLQKYHRYLPPKQAVIASVISPIVFGNVPII 661
Query: 168 AVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVA 227
+ S+N S R+AAT + + I K+ L G+P K+ KK I+ MF + +V
Sbjct: 662 MFKKSSDN--SLRLAATGSYVNCDTNSVIAKRAVLTGHPFKVHKKLVTIRYMFFNPEDVI 719
Query: 228 QCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDRILMSDIVFM 284
+ ++ T G G +K E +G G + TF +I + D V M
Sbjct: 720 WFKPIQLFTKQGRTGYIK----EPLGTH----------GYFKATFNGKITVQDTVAM 762
>DICTYBASE|DDB_G0278331 [details] [associations]
symbol:DDB_G0278331 "Pre-rRNA-processing protein TSR1
homolog" species:44689 "Dictyostelium discoideum" [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
dictyBase:DDB_G0278331 GO:GO:0005730 GenomeReviews:CM000152_GR
EMBL:AAFI02000023 GO:GO:0042254 InterPro:IPR007034 Pfam:PF04950
eggNOG:COG5177 KO:K14799 OMA:DAEQTWP RefSeq:XP_642295.1
STRING:Q54YA7 EnsemblProtists:DDB0205380 GeneID:8621502
KEGG:ddi:DDB_G0278331 ProtClustDB:CLSZ2729113 Uniprot:Q54YA7
Length = 826
Score = 158 (60.7 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 47/195 (24%), Positives = 92/195 (47%)
Query: 57 YLRMEIHDVPFEMVEYFDPC---HPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRD 113
Y+R+ + + P ++VE P + G+ E + + +++H+ + + V +S++
Sbjct: 592 YVRIHLVNGPKQLVERNTTAITTKPEVAVGLYRYENKISLLHFSVEKHKSYEETV-RSKE 650
Query: 114 PIIVSIGWRRFQTIPVYAIEDRS-GRHRMLKYTPEHMHCLATFWGPLAPPQTGVVAVQNL 172
+ GWR+F T P+Y+I + + + K+ + +AT +GP+ P ++
Sbjct: 651 EVYFHFGWRKFSTSPIYSISSPNCDKQKFEKFLLPARNTMATIYGPITYPPAPLLIFNGK 710
Query: 173 SNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCK-IFKKTALIKDMFTSDLEVAQCEG 231
N+ + AT + N + I K+I L G K I KK +KDMF ++ +
Sbjct: 711 DCNE----LVATGYLSSVNPDRIICKRIILTGVIAKSISKKFVTVKDMFYYPEDINWFKK 766
Query: 232 KEVRTVSGIRGQVKK 246
E+ T G G +K+
Sbjct: 767 VELYTKMGRVGHIKE 781
>UNIPROTKB|Q61WR2 [details] [associations]
symbol:tag-151 "Pre-rRNA-processing protein TSR1 homolog"
species:6238 "Caenorhabditis briggsae" [GO:0005730 "nucleolus"
evidence=ISS] [GO:0042255 "ribosome assembly" evidence=ISS]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 GO:GO:0005730
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 EMBL:HE600920
RefSeq:XP_002630359.1 STRING:Q61WR2 EnsemblMetazoa:CBG04291
GeneID:8571874 KEGG:cbr:CBG04291 CTD:8571874 WormBase:CBG04291
eggNOG:COG5177 HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP
Uniprot:Q61WR2
Length = 788
Score = 151 (58.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 48/210 (22%), Positives = 99/210 (47%)
Query: 39 NDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRL 98
ND+D + + F G + + I +VP ++E + +++ + EQ + + + L
Sbjct: 517 NDVDAGDAVIDKKFN-GVFASVYIENVPVSVMEAYKETKNLVLFQLLPHEQKMSILNMVL 575
Query: 99 KRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGP 158
K+H + I +G+R+F+ V + + ++ ++ P +AT + P
Sbjct: 576 KKHPSCTVPIGSEDQKFIFYVGFRQFEAHAVLSSNTPGDKFKLERFMPTEKTFVATVYAP 635
Query: 159 LA-PPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALIK 217
+ P T + Q+ Q + AT VL+ N + + K+ L G+P KI ++ +++
Sbjct: 636 ITFNPATVLCFRQDDKGRQ---ELVATGSVLDTNPDRIVLKRTVLSGHPYKINRRAVVVR 692
Query: 218 DMFTSDLEVAQCEGKEVRTVSGIRGQVKKA 247
MF + ++ + E+ T SG RG +K+A
Sbjct: 693 YMFFNREDIDWFKPVELYTPSGRRGHIKEA 722
>WB|WBGene00006497 [details] [associations]
symbol:tag-151 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
GO:GO:0009792 GO:GO:0040010 GO:GO:0005730 GO:GO:0040011
EMBL:FO081114 GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950
eggNOG:COG5177 HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP
PIR:C88131 RefSeq:NP_494840.1 ProteinModelPortal:Q19329
STRING:Q19329 PaxDb:Q19329 EnsemblMetazoa:F10G7.1.1
EnsemblMetazoa:F10G7.1.2 GeneID:173812 KEGG:cel:CELE_F10G7.1
UCSC:F10G7.1.2 CTD:173812 WormBase:F10G7.1
GeneTree:ENSGT00550000074945 InParanoid:Q19329 NextBio:881217
Uniprot:Q19329
Length = 785
Score = 147 (56.8 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 49/222 (22%), Positives = 105/222 (47%)
Query: 39 NDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRL 98
ND+D + + + F G + + I +VP ++E + +++ + E + + + L
Sbjct: 514 NDVDADSVADKK-FN-GAFASVFIENVPVAVLEAYKDAKNLVLFQLLPHEHKMSVLNMVL 571
Query: 99 KRHRWWHKKVLKSRDP-IIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWG 157
K+H + ++ I +G+R+F+ V++ + ++ ++ P +AT +
Sbjct: 572 KKHPSCTIPITSDQNQKFIFYVGFRQFEANAVFSSNTPGDKFKLERFMPTEKTFVATVYA 631
Query: 158 PLA-PPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALI 216
P+ P T + Q+ Q + AT +L+ N + + K+ L G+P KI ++ ++
Sbjct: 632 PITFNPATVLCFRQDDKGRQ---ELVATGSILDSNPDRIVLKRTVLAGHPYKINRRAVVV 688
Query: 217 KDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKR 258
+ MF + ++ + E+ T SG RG +K+A GN R
Sbjct: 689 RYMFFNREDIEWFKPVELYTPSGRRGHIKEAVGTH-GNMKCR 729
>UNIPROTKB|Q19329 [details] [associations]
symbol:tag-151 "Pre-rRNA-processing protein TSR1 homolog"
species:6239 "Caenorhabditis elegans" [GO:0042255 "ribosome
assembly" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 GO:GO:0009792
GO:GO:0040010 GO:GO:0005730 GO:GO:0040011 EMBL:FO081114
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177
HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP PIR:C88131
RefSeq:NP_494840.1 ProteinModelPortal:Q19329 STRING:Q19329
PaxDb:Q19329 EnsemblMetazoa:F10G7.1.1 EnsemblMetazoa:F10G7.1.2
GeneID:173812 KEGG:cel:CELE_F10G7.1 UCSC:F10G7.1.2 CTD:173812
WormBase:F10G7.1 GeneTree:ENSGT00550000074945 InParanoid:Q19329
NextBio:881217 Uniprot:Q19329
Length = 785
Score = 147 (56.8 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 49/222 (22%), Positives = 105/222 (47%)
Query: 39 NDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRL 98
ND+D + + + F G + + I +VP ++E + +++ + E + + + L
Sbjct: 514 NDVDADSVADKK-FN-GAFASVFIENVPVAVLEAYKDAKNLVLFQLLPHEHKMSVLNMVL 571
Query: 99 KRHRWWHKKVLKSRDP-IIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWG 157
K+H + ++ I +G+R+F+ V++ + ++ ++ P +AT +
Sbjct: 572 KKHPSCTIPITSDQNQKFIFYVGFRQFEANAVFSSNTPGDKFKLERFMPTEKTFVATVYA 631
Query: 158 PLA-PPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTALI 216
P+ P T + Q+ Q + AT +L+ N + + K+ L G+P KI ++ ++
Sbjct: 632 PITFNPATVLCFRQDDKGRQ---ELVATGSILDSNPDRIVLKRTVLAGHPYKINRRAVVV 688
Query: 217 KDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKR 258
+ MF + ++ + E+ T SG RG +K+A GN R
Sbjct: 689 RYMFFNREDIEWFKPVELYTPSGRRGHIKEAVGTH-GNMKCR 729
>SGD|S000002218 [details] [associations]
symbol:TSR1 "Protein required for processing of 20S pre-rRNA
in the cytoplasm" species:4932 "Saccharomyces cerevisiae"
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0043021
"ribonucleoprotein complex binding" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA;IDA] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
SGD:S000002218 GO:GO:0005737 GO:GO:0005730 EMBL:BK006938
GO:GO:0043021 GO:GO:0030686 GO:GO:0006364 InterPro:IPR007034
Pfam:PF04950 EMBL:U53668 eggNOG:COG5177 HOGENOM:HOG000165026
KO:K14799 OMA:DAEQTWP GeneTree:ENSGT00550000074945
OrthoDB:EOG4BS0TS EMBL:Z74108 PIR:S67595 RefSeq:NP_010223.1
ProteinModelPortal:Q07381 DIP:DIP-6294N IntAct:Q07381
MINT:MINT-616207 STRING:Q07381 PaxDb:Q07381 PeptideAtlas:Q07381
EnsemblFungi:YDL060W GeneID:851499 KEGG:sce:YDL060W CYGD:YDL060w
NextBio:968840 Genevestigator:Q07381 GermOnline:YDL060W
Uniprot:Q07381
Length = 788
Score = 120 (47.3 bits), Expect = 0.00070, P = 0.00070
Identities = 58/262 (22%), Positives = 106/262 (40%)
Query: 39 NDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVL-VGGIGLGEQNVGYMQVR 97
N + + T+ E + G +RM I F + + DP + V G+ L E +
Sbjct: 539 NRIIKETKNEAQAI-AGDRIRMFIRFPKFLLEKIQDPKQLLFAVYGLLLHEHKNAVVNFS 597
Query: 98 LKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGR--HRMLKYTPEHMHCLATF 155
L+R + K V S++PI+V G RR+ P+++ S H+ ++ +AT
Sbjct: 598 LQRWEQYDKPV-PSQEPIVVQYGVRRYTIQPLFSQGSNSPNNVHKYERFLHPDTVSVATC 656
Query: 156 WGPLAPPQTGVVAVQNLSNNQASFRIAATAVVLEFNHEVKIKKKIKLVGYPCKIFKKTAL 215
P+ Q+ + + + + + L +H + K+ L G+P + K
Sbjct: 657 IAPVDFTQSPAIFFKPSPTDAKNIELIGHGTFLNADHSRILAKRAILTGHPFRFHKTVVT 716
Query: 216 IKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKAAKEEIGNQPKRKGGQPREGIARCTFEDR 275
++ MF +V + + T SG G +K E +G G + TF+ +
Sbjct: 717 VRYMFFRPEDVEWFKSIPLFTKSGRSGFIK----ESLGTH----------GYFKATFDGK 762
Query: 276 ILMSDIVFM----RGWADVEIP 293
+ D+V M R W +P
Sbjct: 763 LSAQDVVAMSLYKRMWPMPSLP 784
>UNIPROTKB|G4NCG9 [details] [associations]
symbol:MGG_01087 "Ribosome biogenesis protein TSR1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
[GO:0043021 "ribonucleoprotein complex binding" evidence=ISS]
[GO:0043581 "mycelium development" evidence=IEP] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 GO:GO:0005737 GO:GO:0005730
EMBL:CM001235 GO:GO:0043581 GO:GO:0043021 GO:GO:0006364
InterPro:IPR007034 Pfam:PF04950 KO:K14799 RefSeq:XP_003717850.1
EnsemblFungi:MGG_01087T0 GeneID:2674231 KEGG:mgr:MGG_01087
Uniprot:G4NCG9
Length = 810
Score = 120 (47.3 bits), Expect = 0.00072, P = 0.00072
Identities = 50/234 (21%), Positives = 99/234 (42%)
Query: 21 DQMKEEIEFRKQMNIAELN-DLDEVTRLELEG-FRTGTYLRMEIHDVPFEMVEYFDPCHP 78
D+ E ++R+ + + + N TR L G GT + + + VP + +D P
Sbjct: 519 DRAHEPEDWRRLLQVPDYNGSKSRCTREALVGGVAPGTRVAVHLKGVPASVAASYDGRKP 578
Query: 79 VLVGGIGLGE--QNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRS 136
+ + + E Q+V + L + LK+++ +++ G RR P+++ +
Sbjct: 579 ITMFSLLRHENKQSVVNFLINLSSE---FPRSLKAKEELVIQYGPRRLVINPLFSQGGNT 635
Query: 137 GR--HRMLKYTPEHMHCLATFWGPLA-PPQTGVVAVQNLSNNQASFRIAATAVVLEFNHE 193
H+ ++ +ATF GP+ P + + ++ S + T L +
Sbjct: 636 PNDVHKYGRFLHPGQSAVATFVGPVIWGPVPALFFKKQEGSDDLSLTLVGTGTALPPSTG 695
Query: 194 VKIKKKIKLVGYPCKIFKKTALIKDMFTSDLEVAQCEGKEVRTVSGIRGQVKKA 247
+ K++ L G+P I KK I+ MF + +V + + T G G K+A
Sbjct: 696 RVVAKRVILTGHPYHIHKKIVTIRYMFFNREDVEWFKALPLWTRRGRSGYFKEA 749
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 458 425 0.00084 118 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 39
No. of states in DFA: 611 (65 KB)
Total size of DFA: 264 KB (2141 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.21u 0.10s 32.31t Elapsed: 00:00:01
Total cpu time: 32.21u 0.10s 32.31t Elapsed: 00:00:01
Start: Sat May 11 04:24:58 2013 End: Sat May 11 04:24:59 2013