Your job contains 1 sequence.
>012677
MANPEVEETESCVRKAVELKKELQRLVKAILDEDDYGGLQVTNEALRVLSCLKDLKLKKP
HSFKGGAAGDDHLLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQT
RQVLSHTVLIPNHLVREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSS
LSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILN
LSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIGKLGAMT
PLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDELLAIL
AMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEE
NANGTLSRLAENGTSRAKRKANGILERLNKAALIVHTA
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012677
(458 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 1188 9.5e-121 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 794 5.4e-79 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 717 7.7e-71 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 669 9.4e-66 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 666 2.0e-65 1
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 661 6.7e-65 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 656 2.3e-64 1
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 656 2.3e-64 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 645 3.3e-63 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 631 1.0e-61 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 614 6.4e-60 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 383 8.3e-58 2
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 272 1.2e-42 2
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 445 1.9e-41 1
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 429 1.1e-39 1
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 400 1.2e-36 1
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 372 2.8e-34 1
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 360 5.2e-33 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 356 1.4e-32 1
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 359 4.4e-32 1
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 341 5.4e-31 1
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 336 1.8e-30 1
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 343 2.2e-30 1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 263 2.8e-30 2
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 256 4.9e-29 2
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 318 1.5e-28 1
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 318 1.2e-27 1
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 241 3.2e-25 2
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 193 6.9e-23 2
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 248 1.2e-22 2
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 234 3.1e-22 2
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 224 8.2e-19 2
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 211 9.0e-18 2
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 240 1.6e-17 1
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 237 1.7e-17 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 235 3.0e-17 1
UNIPROTKB|Q6K762 - symbol:PUB73 "U-box domain-containing ... 233 1.4e-16 1
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 229 1.4e-16 1
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 207 2.5e-16 3
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 193 4.7e-16 2
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 215 6.6e-15 1
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 191 4.1e-12 1
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species... 186 1.2e-11 1
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 136 1.4e-10 3
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 177 1.6e-10 1
TAIR|locus:2135788 - symbol:AT4G12710 species:3702 "Arabi... 175 2.0e-10 1
TAIR|locus:1005716696 - symbol:AT1G08315 species:3702 "Ar... 166 1.2e-09 1
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 166 2.5e-09 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 167 3.1e-09 1
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 168 4.3e-09 1
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 160 4.8e-09 1
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 134 9.8e-09 2
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 161 1.1e-08 1
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 160 1.4e-08 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 159 1.8e-08 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 156 3.8e-08 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 156 3.8e-08 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 156 3.8e-08 1
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 154 4.5e-08 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 154 6.3e-08 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 148 2.9e-07 1
TAIR|locus:2040214 - symbol:AT2G25130 species:3702 "Arabi... 146 4.7e-07 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 149 4.9e-07 1
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 144 4.9e-07 1
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 145 1.4e-06 1
TAIR|locus:2116792 - symbol:AT4G31890 "AT4G31890" species... 144 3.0e-06 2
TAIR|locus:2145653 - symbol:AT5G14510 species:3702 "Arabi... 136 3.0e-06 1
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 141 3.8e-06 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 138 8.0e-06 1
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 134 2.3e-05 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 130 3.2e-05 1
DICTYBASE|DDB_G0270014 - symbol:DDB_G0270014 species:4468... 121 3.7e-05 1
SGD|S000000739 - symbol:VAC8 "Phosphorylated and palmitoy... 123 0.00022 1
DICTYBASE|DDB_G0293212 - symbol:DDB_G0293212 species:4468... 122 0.00047 1
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 121 0.00059 2
ASPGD|ASPL0000008980 - symbol:AN12408 species:162425 "Eme... 119 0.00061 1
TAIR|locus:2157358 - symbol:AT5G50900 species:3702 "Arabi... 117 0.00096 1
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 1188 (423.3 bits), Expect = 9.5e-121, P = 9.5e-121
Identities = 249/464 (53%), Positives = 327/464 (70%)
Query: 1 MANPEVEETE-SCVRKAVELKKELQRLVKAILDEDDYGGLQVTNEALRVLSCLKDLKLKK 59
MA V +++ + + KA ELK+E+++L+ I DEDD G +Q ++ LS L++ ++K
Sbjct: 1 MAKTGVFDSDPTAIAKAKELKREMKKLLIKIDDEDDLG-VQTIDQLQDALSALREATMRK 59
Query: 60 PHSFKXXXXXXXXXXXXPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQ 119
K P EFRCP+S E+M DPVVLA+GQT+D+ IQ+WL GNRTCP+
Sbjct: 60 --MAKSSSLEMLETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPK 117
Query: 120 TRQVLSHTVLIPNHLVREMISQWCKEHGIELPK---PIKDTDEDVVTDASRSHLNSLLEK 176
T+QVL HT L PN L+REMIS+WCK++G+E P +++ VT + R NSLL K
Sbjct: 118 TQQVLPHTALTPNLLIREMISKWCKKNGLETKSQYHPNLVNEDETVTRSDREIFNSLLCK 177
Query: 177 MSSS-LSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLI 235
+SSS L DQK AAKELRLLT++ FRALFGES D I L++PL G ++ D L ED++
Sbjct: 178 VSSSNLQDQKSAAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHG-SNPDEKLQEDVV 236
Query: 236 TTILNLSIHDE-NKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIG 294
TT+LN+SIHD+ NK+LV ENP IPLLID++R GT+ TR N NK++IG
Sbjct: 237 TTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIG 296
Query: 295 KLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVD 354
K G + PLIDLLEEG+PLA+KDVA+AIF+LCI EN+ RAV GAVRV+ +KI VD
Sbjct: 297 KSGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGLYVD 356
Query: 355 ELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTR 414
ELLAILAML +H A+EE+GELG + LL+I RES C+RNKEN IL+ ICF+DRT+ +
Sbjct: 357 ELLAILAMLVTHWKAVEELGELGGVSWLLKITRESECKRNKENAIVILHTICFSDRTKWK 416
Query: 415 EIMEEENANGTLSRLAENGTSRAKRKANGILERLNKAALIVHTA 458
EI EEENA+GT+++L+ GTSRA+RKANGIL+RL KA + HTA
Sbjct: 417 EIKEEENAHGTITKLSREGTSRAQRKANGILDRLRKAMNLTHTA 460
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 188/458 (41%), Positives = 277/458 (60%)
Query: 10 ESCVRKAVELKKELQRLVKAIL------DEDD---YGGL-QVTNEALRVLSCLKDLKLKK 59
+S A L++ELQ+++ IL D D+ + G+ + +EA+R+L+CL+ ++ K
Sbjct: 3 DSTETNADTLRRELQKVLTEILNDGGGNDRDETEAFSGVVKAIDEAVRILTCLRKVESKI 62
Query: 60 PHSFKXXXXXXXXXXXXPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQ 119
P S P EF C +S IM +PV++A+GQT+++ I WL RTCP+
Sbjct: 63 PES-------DISPVEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPK 114
Query: 120 TRQVLSHTVLIPNHLVREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSS 179
T+QVLSH + IPNHL+ ++I+QWC + + KP +DE +V + S + +LL+++SS
Sbjct: 115 TKQVLSHRLWIPNHLISDLITQWCLVNKYDHQKP---SDE-LVAELFTSDIEALLQRVSS 170
Query: 180 SLS--DQKEAAKELRLLTKRMPLFRALFGEST-DAIPLLLSPLSP--GRADTDPGLLEDL 234
S S DQ EAAKELR TK+ P R F D+I LLSPLS D+ L E++
Sbjct: 171 SSSVADQIEAAKELRHQTKKFPNVRVFFVAGIHDSITRLLSPLSTLDEAVDSSLELQENI 230
Query: 235 ITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIG 294
+T + NLSI + NK ++AEN L IPLL S++ GT ETRRN NK+IIG
Sbjct: 231 VTALFNLSILESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIG 290
Query: 295 KLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVD 354
A+ LIDL+EEG LA K+ S +F+LCI+LENK + V AG + +KI S VD
Sbjct: 291 NSEAVKALIDLIEEGDLLATKEATSTVFNLCIVLENKGKVVSAGLIHAATKKIKAGSNVD 350
Query: 355 ELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFT--DRTR 412
ELL++LA++S+H A+EE+ +LG I L I+R+ + EN I++N+ DR+R
Sbjct: 351 ELLSLLALISTHNRAVEEMDKLGFIYDLFSILRKPSSLLTGENAVVIVFNMYDRNRDRSR 410
Query: 413 TREIMEEENANGTLSRLAENGTSRAKRKANGILERLNK 450
+ + EEEN +GT ++LA+ G+ RA RKA GIL+ + +
Sbjct: 411 LKVVGEEENQHGTFTKLAKQGSVRAARKAQGILQWIKR 448
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 159/381 (41%), Positives = 238/381 (62%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P EFRCPIS E+M DPV++++GQT++R CIQ+WLD G++TCP+T+Q LSHT L PN +++
Sbjct: 229 PDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLK 288
Query: 137 EMISQWCKEHGIELPKPIKDT-DEDVVTDASRSH--LNSLLEKMSSSLSD-QKEAAKELR 192
+ISQWC+ +GIELPK +++ D+ + H L SL+ ++ S D Q+ AA E+R
Sbjct: 289 SLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRAAAGEIR 348
Query: 193 LLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLVA 252
LL KR R E+ AIPLL++ LS +DP E +T +LNLSIH+ NK +
Sbjct: 349 LLAKRNVNNRICIAEA-GAIPLLVNLLS----SSDPRTQEHAVTALLNLSIHENNKASIV 403
Query: 253 ENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKLGAMTPLIDLLEEGHPL 312
++ AIP +++ ++TG++ETR N NK+ IG GA+ PLI+LL +G P
Sbjct: 404 DSH-AIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSPR 462
Query: 313 AMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIME--NSLVDELLAILAMLSSHQDAI 370
KD A+AIF+LCI NK RAV AG V ++ +++ ++DE L++L++L+ + +
Sbjct: 463 GKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGK 522
Query: 371 EEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEENANGTLSRLA 430
I IP L+ +I+ + RN+EN AAIL+ +C D +T + L L+
Sbjct: 523 IVIARSEPIPPLVEVIKTGS-PRNRENAAAILWLLCSADTEQTLAA-KAAGVEDALKELS 580
Query: 431 ENGTSRAKRKANGILERLNKA 451
E GT RAKRKA+ ILE +++A
Sbjct: 581 ETGTDRAKRKASSILELMHQA 601
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 157/382 (41%), Positives = 228/382 (59%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P FRCPIS E+M DPV+++ GQT++R IQ+WLD G++TCP++++ L H L PN++++
Sbjct: 249 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLK 308
Query: 137 EMISQWCKEHGIELPK---PIKDTD--EDVVTDASRSHLNSLLEKMSSSLSDQKEAAK-E 190
+I+ WC+ +GIELP+ + T +D R+ + SLLEK+++ ++Q+ AA E
Sbjct: 309 SLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAGE 368
Query: 191 LRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRL 250
LRLL KR R E+ AIPLL+ LS DP E +T +LNLSI++ NK
Sbjct: 369 LRLLAKRNVDNRVCIAEA-GAIPLLVELLS----SPDPRTQEHSVTALLNLSINEGNKGA 423
Query: 251 VAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKLGAMTPLIDLLEEGH 310
+ + AI +++ ++ G++E R N NK+ IG GA+ LI LLEEG
Sbjct: 424 IVDAG-AITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGT 482
Query: 311 PLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIME--NSLVDELLAILAMLSSHQD 368
KD A+AIF+LCI NK RAV G V + R + + +VDE LAILA+LS++Q+
Sbjct: 483 RRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQE 542
Query: 369 AIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEENANGTLSR 428
I E +IP L+ IIR + RN+EN AAIL+ +C + R + E A+ L
Sbjct: 543 GKTAIAEAESIPVLVEIIRTGS-PRNRENAAAILWYLCIGNIERLN-VAREVGADVALKE 600
Query: 429 LAENGTSRAKRKANGILERLNK 450
L ENGT RAKRKA +LE + +
Sbjct: 601 LTENGTDRAKRKAASLLELIQQ 622
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 152/383 (39%), Positives = 226/383 (59%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P +FRCPIS E+M DPV++++GQT++R CI++W++ G+ TCP+T+Q L+ T L PN+++R
Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLR 316
Query: 137 EMISQWCKEHGIELPKPIKDTDEDVVTD----ASRSHLNSLLEKMS-SSLSDQKEAAKEL 191
+I+QWC+ + IE PKP V+ A + + L+ +++ + DQ+ AA E+
Sbjct: 317 SLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGEI 376
Query: 192 RLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLV 251
RLL KR R E+ AIPLL+ LS D + E +T +LNLSI + NK +
Sbjct: 377 RLLAKRNADNRVAIAEA-GAIPLLVGLLST----PDSRIQEHSVTALLNLSICENNKGAI 431
Query: 252 AENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKLGAMTPLIDLLEEGHP 311
AIP ++ ++ G++E R N NK+ IG LGA+ PL+ LL EG
Sbjct: 432 VSAG-AIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQ 490
Query: 312 LAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIME--NSLVDELLAILAMLSSHQDA 369
KD A+A+F+LCI NK +A+ AG + + R + E + +VDE LAILA+LSSH +
Sbjct: 491 RGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEG 550
Query: 370 IEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEENANGTLSRL 429
IG A+P L+ IR + RN+EN AA+L ++C D E ++ G L L
Sbjct: 551 KAIIGSSDAVPSLVEFIRTGS-PRNRENAAAVLVHLCSGDPQHLVEA-QKLGLMGPLIDL 608
Query: 430 AENGTSRAKRKANGILERLNKAA 452
A NGT R KRKA +LER+++ A
Sbjct: 609 AGNGTDRGKRKAAQLLERISRLA 631
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 173/462 (37%), Positives = 252/462 (54%)
Query: 1 MANPEVEETESCVRKAVELKKELQRLVKAILDEDDYGGLQ--VTNEALRVLSCLKDLKLK 58
MA+ +E+ + A L +EL +++ I D GG +EA+R+L+CL+ ++ K
Sbjct: 1 MADSTADESTN----ADTLWRELHKVLPEIWY--DGGGKDHCEIDEAIRILTCLRKIESK 54
Query: 59 KPHSFKXXXXXXXXXXXXPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCP 118
P S P EF C +S +IM +P+++A+GQTF++ I WL RTCP
Sbjct: 55 NPES-------DISPVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKH-ERTCP 106
Query: 119 QTRQVLSHTVLIPNHLVREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMS 178
+T+QVL H +IPNHL+ E+I +WC H + PK T ++V+ D L SLL+++S
Sbjct: 107 RTKQVLYHRFMIPNHLINEVIKEWCLIHNFDRPK----TSDEVI-DLFTGDLESLLQRIS 161
Query: 179 S--SLSDQKEAAKELRLLTKRMPLFRALF-GESTDAIPLLLSPLSPGRADTDPGLLEDLI 235
S S+ DQ EAAKEL L KR F + D+I LL+PLS D++P LE+++
Sbjct: 162 SPSSVEDQTEAAKELALKAKRFSSVCVYFVAKIPDSITRLLTPLSISE-DSNPEFLENIV 220
Query: 236 TTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGK 295
T + S ++NK LVAENPL +PLL ++ GT+ TR + NK+IIG
Sbjct: 221 TALHIFSTSEKNKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTDSNKIIIGN 280
Query: 296 LGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDE 355
+ LI ++EEG LA + SA+ +LC + E +AV G +R ++KI S V
Sbjct: 281 SEVLKALIHVIEEGDSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSNVSM 340
Query: 356 LLAILAMLSS--HQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTD---- 409
LL++LA +S+ HQ EE+ LG I L I+R S N EN I+YNIC +
Sbjct: 341 LLSLLAFVSTQNHQTT-EEMDNLGLIYDLFSILRNSNSLVNDENAVVIVYNICKSYKALQ 399
Query: 410 ----RTRTREI-MEEENANGTLSRLAENGTSRAKRKANGILE 446
R R++ +EEEN +GT +RL RA A ILE
Sbjct: 400 NVVLREEKRDVVLEEENKHGTFTRLENQEAGRATSLAKRILE 441
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 150/382 (39%), Positives = 225/382 (58%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P EFRCPIS E+M DPV+++ GQT++R CI++W+ G+ TCP T+Q +S + L PN+++R
Sbjct: 274 PDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLR 333
Query: 137 EMISQWCKEHGIELPK----PIKDTDEDVVTDASRSHLNSLLEKMSS-SLSDQKEAAKEL 191
+ISQWC+ +G+E PK P K T + + R+++++LL K+ S +Q+ AA EL
Sbjct: 334 SLISQWCETNGMEPPKRSTQPNKPTP--ACSSSERANIDALLSKLCSPDTEEQRSAAAEL 391
Query: 192 RLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLV 251
RLL KR R E+ AIPLLLS LS T E +T +LNLSIH++NK +
Sbjct: 392 RLLAKRNANNRICIAEA-GAIPLLLSLLSSSDLRTQ----EHAVTALLNLSIHEDNKASI 446
Query: 252 AENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKLGAMTPLIDLLEEGHP 311
+ A+P ++ ++ G++E R N K+ IG +GA+ L+ LL EG
Sbjct: 447 ISSG-AVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGEGSQ 505
Query: 312 LAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIME--NSLVDELLAILAMLSSHQDA 369
KD A+A+F+LCI NK RA+ AG V +I+ + +L+DE +AIL++LSSH +
Sbjct: 506 RGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHPEG 565
Query: 370 IEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEE-NANGTLSR 428
IG +P L+ +I T RN+EN AA++ ++C + +E L
Sbjct: 566 KAAIGAAEPVPVLVEMIGSGT-PRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLRE 624
Query: 429 LAENGTSRAKRKANGILERLNK 450
LA NGT R KRKA +LER+++
Sbjct: 625 LALNGTDRGKRKAVQLLERMSR 646
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 151/379 (39%), Positives = 225/379 (59%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P +F CP+S E+M DPV++A GQT++R IQRW+D GN TCP+T+Q L + L PN+++R
Sbjct: 242 PVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVLR 301
Query: 137 EMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSS-SLSDQKEAAKELRLLT 195
+IS+WC EH IE +P + S + +L++++SS S D++ A E+R L+
Sbjct: 302 SLISRWCAEHNIE--QPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLS 359
Query: 196 KRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLVAENP 255
KR R L E+ AIP+L++ L+ D E+ IT +LNLSI++ NK L+
Sbjct: 360 KRSTDNRILIAEA-GAIPVLVNLLT----SEDVATQENAITCVLNLSIYENNKELIMFAG 414
Query: 256 LAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKLGAMTPLIDLLEEGHPLAMK 315
A+ ++ +R GT+E R N NK+IIG GA+ L+DLLE G P K
Sbjct: 415 -AVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPRGKK 473
Query: 316 DVASAIFSLCILLENKRRAVHAGAVRVILRKIMENS---LVDELLAILAMLSSHQDAIEE 372
D A+A+F+LCI NK RAV AG V +++ + +++ +VDE L IL++L+++QDA
Sbjct: 474 DAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSA 533
Query: 373 IGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEENANGTLSRLAEN 432
I + +P L+ I++ RN+EN AAIL ++C D + I A L L++N
Sbjct: 534 IVKANTLPALIGILQTDQT-RNRENAAAILLSLCKRDTEKLITI-GRLGAVVPLMDLSKN 591
Query: 433 GTSRAKRKANGILERLNKA 451
GT R KRKA +LE L KA
Sbjct: 592 GTERGKRKAISLLELLRKA 610
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 164/463 (35%), Positives = 260/463 (56%)
Query: 1 MANPEVEETESCVRKAVELKKELQRLVKAILDE----DDYGGLQVTNEALRVLSCLKDLK 56
MA+ + TE+ + L++EL++++ L++ D ++ +EA+R+L+ LK ++
Sbjct: 1 MADSTADATETNA-DTLTLRRELKKVLTENLNDGGVKDRVETVKSIDEAIRILNRLKIVE 59
Query: 57 LKKPHSFKXXXXXXXXXXXXPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRT 116
KK P EF+C +S IM DPV++ +GQT+++ I WL+ + T
Sbjct: 60 SKK-----RKRESDSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNH-DLT 113
Query: 117 CPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEK 176
CP +QVL L PNHL+ E+I++WC + + P P K +D D VT+ + SLL++
Sbjct: 114 CPTAKQVLYRVCLTPNHLINELITRWCLANKYDRPAP-KPSDIDYVTELFTDGIESLLQR 172
Query: 177 MSS---SLSDQKEAAKELRLLTKRMPLFRALF-GESTDAIPLLLSPLSP-G-RADTDPGL 230
+SS S++DQ EAAKEL L T++ R F E D+I LL+PLS G D++P L
Sbjct: 173 ISSPSSSVADQTEAAKELALQTEKFVNVRDFFIKELPDSITRLLTPLSVLGDEVDSNPEL 232
Query: 231 LEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNK 290
E+++T + N+S ++NK ++AEN IPLL S++ G++ TRRN NK
Sbjct: 233 QENIVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNK 292
Query: 291 LIIGKLGAMTPLIDLLEEGHPL-AMKDVASAIFSLCI-LLENKRRAVHAGAVRVILRKIM 348
+IIG A+ LIDL+ E L A D A+ LC EN ++A+ G ++ I
Sbjct: 293 IIIGNSVALKALIDLIGELDDLSATHDALCAVIDLCCDERENWKKAISLGLAPAAIKNIK 352
Query: 349 ENSLVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFT 408
+ E LA LA++S H+ I+E+ LG I LL I+R+++C EN I+ N+
Sbjct: 353 ARRNLFESLAALALISPHERVIQEVANLGVIYDLLSILRKTSCMVTCENAVVIVGNMYAK 412
Query: 409 DRTRT-REIM-EEENANGTLSRLAENGTSRAKRKANGILERLN 449
R R+ ++I+ EEEN + T +++A G+ A KA GIL+ +N
Sbjct: 413 SRERSIKKILAEEENQHKTFTKIATQGSVVAVMKAQGILQCIN 455
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 166/469 (35%), Positives = 257/469 (54%)
Query: 1 MANPEVEETESCVRKAVELKKELQRLVKAILDEDDYGGLQVTNEALRVLSCL-----KDL 55
++ P +E+ S RK +E + + V ++ DE + + L+ D
Sbjct: 164 LSEP-MEKDASSNRKVIEKLESIPETVHSLSDEKKFESPPPWKSSSVSLAFFLSKDGDDE 222
Query: 56 KLKKPHSFKXXXXXXXXXXXXPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNR 115
+L+K + P +F CPIS E+M DP +++ GQT++R IQRW+D GN
Sbjct: 223 RLEKAVTENSDDSQKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNL 282
Query: 116 TCPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPKPI-----KDTD---EDVVTDASR 167
+CP+T+Q L + L PN+++R +ISQWC +H IE P K++D D+ D S
Sbjct: 283 SCPKTQQKLENFTLTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSA 342
Query: 168 SHLNSLLEKMSS-SLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADT 226
+ +L+ K+SS S+ D++ A E+R L+KR R L E+ AIP+L+ L+ +D
Sbjct: 343 --IRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEA-GAIPVLVKLLT---SDG 396
Query: 227 DPGLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXX 286
D E+ +T ILNLSI++ NK L+ A+ ++ +R G++E R N
Sbjct: 397 DTETQENAVTCILNLSIYEHNKELIMLAG-AVTSIVLVLRAGSMEARENAAATLFSLSLA 455
Query: 287 XXNKLIIGKLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRK 346
NK+IIG GA+ L+DLL+ G KD A+A+F+LCI NK RAV AG V+ +++
Sbjct: 456 DENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKM 515
Query: 347 IMENS---LVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILY 403
+ ++S + DE L IL++L+S+Q A I AIP L+ +++ RN+EN AAIL
Sbjct: 516 LTDSSSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCLQKDQ-PRNRENAAAILL 574
Query: 404 NICFTDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGILERLNKAA 452
+C D + I A L L+ +GT RAKRKAN +LE L K++
Sbjct: 575 CLCKRDTEKLISI-GRLGAVVPLMELSRDGTERAKRKANSLLELLRKSS 622
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 137/381 (35%), Positives = 224/381 (58%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P+EF CPI+ EIM DPV++A GQT+++ IQ+W D G++TCP+TRQ L H L PN ++
Sbjct: 291 PHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALK 350
Query: 137 EMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSS-LSDQKEAAKELRLLT 195
+I QWC+++ ++P+ K+ D + + ++ L+E +SSS L +Q+ + K++RLL
Sbjct: 351 NLIMQWCEKNNFKIPE--KEVSPDSQNE-QKDEVSLLVEALSSSQLEEQRRSVKQMRLLA 407
Query: 196 KRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLVAENP 255
+ P R L + AIPLL+ LS D G+ E+ +TT+LNLSI + NK+L++ N
Sbjct: 408 RENPENRVLIANA-GAIPLLVQLLSY----PDSGIQENAVTTLLNLSIDEVNKKLIS-NE 461
Query: 256 LAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKLGAMTPLIDLLEEGHPLAMK 315
AIP +I+ + G E R N NK+ IG + PL+DLL+ G K
Sbjct: 462 GAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQHGTLRGKK 521
Query: 316 DVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSL--VDELLAILAMLSSHQDAIEEI 373
D +A+F+L + NK RA+ AG V+ +L + + +L +DE L+IL +L+SH + + I
Sbjct: 522 DALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGRQAI 581
Query: 374 GELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEENANGTLSRLAENG 433
G+L I L+ IR+ T +NKE ++L + + + ++ L + +G
Sbjct: 582 GQLSFIETLVEFIRQGT-PKNKECATSVLLELGSNNSSFILAALQF-GVYEYLVEITTSG 639
Query: 434 TSRAKRKANGILERLNKAALI 454
T+RA+RKAN +++ ++K+ I
Sbjct: 640 TNRAQRKANALIQLISKSEQI 660
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 383 (139.9 bits), Expect = 8.3e-58, Sum P(2) = 8.3e-58
Identities = 107/296 (36%), Positives = 162/296 (54%)
Query: 153 PIKDTDEDVVTDASRSHLNSLLEKM-SSSLSDQKEAAKELRLLTKRMPLFRALFGESTDA 211
P +T D+ + + L+E++ SSSL Q++A ELRLL K R + G S A
Sbjct: 531 PSNETRRDL--SEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNS-GA 587
Query: 212 IPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIE 271
I LL+ L TD E+ +T +LNLSI+D NK+ +A+ AI LI + G+ E
Sbjct: 588 IVLLVELLY----STDSATQENAVTALLNLSINDNNKKAIADAG-AIEPLIHVLENGSSE 642
Query: 272 TRRNXXXXXXXXXXXXXNKLIIGKLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENK 331
+ N NK+ IG+ GA+ PL+DLL G P KD A+A+F+L I ENK
Sbjct: 643 AKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENK 702
Query: 332 RRAVHAGAVRVILRKIMENS--LVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRES 389
V +GAVR ++ +M+ + +VD+ +A+LA L++ + IG+ G IP L+ ++ E
Sbjct: 703 AMIVQSGAVRYLI-DLMDPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVV-EL 760
Query: 390 TCERNKENCAAILYNICFTDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGIL 445
R KEN AA L + T+ R ++ +E A L L+++GT RA+ KA +L
Sbjct: 761 GSARGKENAAAALLQLS-TNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALL 815
Score = 247 (92.0 bits), Expect = 8.3e-58, Sum P(2) = 8.3e-58
Identities = 39/79 (49%), Positives = 62/79 (78%)
Query: 79 EFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREM 138
+F CP+S E+MTDPV++++GQT+++ I+RW+D G + CP+TRQ L+HT LIPN+ V+ +
Sbjct: 236 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKAL 295
Query: 139 ISQWCKEHGIELPKPIKDT 157
I+ WC+ + ++LP P K T
Sbjct: 296 IANWCETNDVKLPDPNKST 314
Score = 99 (39.9 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 34/134 (25%), Positives = 66/134 (49%)
Query: 328 LENKRRAVHAGAVRVILRKIMENSLVDELLAILAML--SSHQDAIEEIGELGAIPCLLRI 385
++N+ ++GA+ +++ + + A+ A+L S + + + I + GAI L+ +
Sbjct: 576 MDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHV 635
Query: 386 IRESTCERNKENCAAILYNICFTDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGIL 445
+ + E KEN AA L+++ + + + + + A G L L NGT R K+ A L
Sbjct: 636 LENGSSEA-KENSAATLFSLSVIEENKIK--IGQSGAIGPLVDLLGNGTPRGKKDAATAL 692
Query: 446 ERL-----NKAALI 454
L NKA ++
Sbjct: 693 FNLSIHQENKAMIV 706
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 272 (100.8 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
Identities = 91/281 (32%), Positives = 139/281 (49%)
Query: 168 SHLNSLLEKMSSSLSDQKEAAK-ELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADT 226
SH L+E + S + K AA E+R LT R G AI LLS L T
Sbjct: 472 SHTIKLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRC-GAITPLLSLLYSEEKLT 530
Query: 227 DPGLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXX 286
E +T +LNLSI + NK ++ E AI L+ + TG + N
Sbjct: 531 Q----EHAVTALLNLSISELNKAMIVEVG-AIEPLVHVLNTGNDRAKENSAASLFSLSVL 585
Query: 287 XXNKLIIGKLGA-MTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILR 345
N+ IG+ A + L++LL +G KD ASA+F+L I +NK R V A AV+ ++
Sbjct: 586 QVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVE 645
Query: 346 KIMEN-SLVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYN 404
+ + +VD+ +A+LA LS+ + + I G IP L+ + + +R KEN A++L
Sbjct: 646 LLDPDLEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETV-DLGSQRGKENAASVLLQ 704
Query: 405 ICFTDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGIL 445
+C + ++ +E A L L+++GT RAK KA +L
Sbjct: 705 LCLNS-PKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLL 744
Score = 250 (93.1 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
Identities = 51/141 (36%), Positives = 84/141 (59%)
Query: 10 ESCVRKAVELKKELQRLVKAILDEDDYGGLQVTNEALRVLSCLKDLKLKKPHSFKXXXXX 69
+ +++++ ++KE R +A E+D ++ T + + ++ C+++ H K
Sbjct: 182 QDLLKESITVEKERIRS-QASKSEED---MEQTEQLIELVLCIRE------HMLKTEFLE 231
Query: 70 XXXXXXXPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVL 129
P FRCP+S E+M DPV++A+GQTFDR I++WLD G CP+TRQVL+H L
Sbjct: 232 VAKGISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQEL 291
Query: 130 IPNHLVREMISQWCKEHGIEL 150
IPN+ V+ MI+ W + + I L
Sbjct: 292 IPNYTVKAMIASWLEANRINL 312
Score = 104 (41.7 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 47/214 (21%), Positives = 95/214 (44%)
Query: 238 ILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKLG 297
I +L+I+ R+ AI L+ + + T+ + NK +I ++G
Sbjct: 496 IRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMIVEVG 555
Query: 298 AMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGA-VRVILRKIMENSLVDEL 356
A+ PL+ +L G+ A ++ A+++FSL +L N+ R + A ++ ++ + + + +
Sbjct: 556 AIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKK 615
Query: 357 LAILAM--LSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTR 414
A A+ LS D I + A+ L+ ++ + E + A+L N+ R
Sbjct: 616 DAASALFNLSITHDNKARIVQAKAVKYLVELL-DPDLEM-VDKAVALLANLSAVGEGR-- 671
Query: 415 EIMEEENANGTLSRLAENGTSRAKRKANGILERL 448
+ + E L + G+ R K A +L +L
Sbjct: 672 QAIVREGGIPLLVETVDLGSQRGKENAASVLLQL 705
Score = 43 (20.2 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 144 KEHG--IELPKPIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKEAAKE 190
K+ G +EL + +D +T +HL S+++ M +S+Q + KE
Sbjct: 141 KQEGTLMELMENALRNQKDDITSLDNNHLESIIQ-MLGLISNQ-DLLKE 187
Score = 42 (19.8 bits), Expect = 5.1e-21, Sum P(3) = 5.1e-21
Identities = 12/64 (18%), Positives = 29/64 (45%)
Query: 88 IMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREMISQWCKEHG 147
++++ +L T ++ I+ + QT Q++ + I H+++ + K G
Sbjct: 178 LISNQDLLKESITVEKERIRSQASKSEEDMEQTEQLIELVLCIREHMLKTEFLEVAK--G 235
Query: 148 IELP 151
I +P
Sbjct: 236 ISIP 239
Score = 37 (18.1 bits), Expect = 5.1e-21, Sum P(3) = 5.1e-21
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 6 VEETESCVRKAVELKKE--LQRLVKAIL--DEDDYGGL 39
V+ E CV++ K+E L L++ L +DD L
Sbjct: 127 VQSVERCVQETESFKQEGTLMELMENALRNQKDDITSL 164
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 445 (161.7 bits), Expect = 1.9e-41, P = 1.9e-41
Identities = 120/392 (30%), Positives = 197/392 (50%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P EF CPIS ++M DPVV + GQT+DRP I +W++EG+ TCP + Q L+ L+PN +R
Sbjct: 298 PKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRALR 357
Query: 137 EMISQWCKEHGIELPKPIKDTD--EDVVTD-ASRSHLNS------LLEKMSSSLSDQKEA 187
+ISQWC +G++ P + E V +SR+ + + +L +M S+ +A
Sbjct: 358 SLISQWCGVYGLQYDSPESNEGMAECVAASCSSRAAMEANKATARILVRMLEDGSENVKA 417
Query: 188 --AKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHD 245
AKE+RLL K RA + AIPLL L D E+ +T +LNLSI +
Sbjct: 418 VAAKEIRLLAKTGKQNRAFIAD-LGAIPLLCRLL----LSNDWMAQENAVTALLNLSIFE 472
Query: 246 ENKRLVAENPLAIPLLIDSVRTG-TIETRRNXXXXXXXXXXXXX-NKLIIGKLGAMTPLI 303
NK + E + L++ ++ G T E + N KLI+ + GA+ L
Sbjct: 473 PNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMNEPGAVEELA 532
Query: 304 DLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDELLAILAML 363
+L +G KD A+F+L E+ R + + AV +++ + +++ +E LA+L
Sbjct: 533 SMLTKGTSRGKKDAVMALFNLSTHPESSARMLESCAVVALIQSLRNDTVSEEAAGALALL 592
Query: 364 SSHQDAIEEIGELGA-IPCLLRIIRESTCERNKENCAAILYNICFTDRTR-TREIMEEEN 421
+ +G I L+ ++R T + KEN + LY IC + + + +
Sbjct: 593 MKQPSIVHLVGSSETVITSLVGLMRRGT-PKGKENAVSALYEICRRGGSALVQRVAKIPG 651
Query: 422 ANGTLSRLAENGTSRAKRKANGILERLNKAAL 453
N + + NGT RAK+KA+ I++ ++ +
Sbjct: 652 LNTVIQTITLNGTKRAKKKASLIVKMCQRSQM 683
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 429 (156.1 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 121/413 (29%), Positives = 197/413 (47%)
Query: 58 KKPHSFKXXXXXXXXXXXXPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTC 117
KKP P +F CPIS ++MTDPV+++ GQT+DR I RW++EG+ TC
Sbjct: 287 KKPRKGFVAQEIGDTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTC 346
Query: 118 PQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPKPIKDTDED---------VVTDASRS 168
P+T Q+L + ++PN ++ +I QWC GI D+ + +A+++
Sbjct: 347 PKTGQMLMDSRIVPNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKA 406
Query: 169 HLNSLLEKMSS-SLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTD 227
++ L++ ++ S + Q AA+E+RLL K RA E+ AIP L L+ A
Sbjct: 407 TVSILIKYLADGSQAAQTVAAREIRLLAKTGKENRAYIAEA-GAIPHLCRLLTSENAIAQ 465
Query: 228 PGLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTG-TIETRRNXXXXXXXXXXX 286
E+ +T +LNLSI+++NK + E + ++ + +G T+E + N
Sbjct: 466 ----ENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAV 521
Query: 287 XXNKLIIGKLG-AMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILR 345
K I + + L LL+ G P KD +A+++L +N R + G V ++
Sbjct: 522 HEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVG 581
Query: 346 KIMENSLVDELLAILAMLSSHQDAIEEIG-ELGAIPCLLRIIRESTCERNKENCAAILYN 404
+ + +E LA+L E IG E A+ L+ ++R T R KEN A L
Sbjct: 582 ALKNEGVAEEAAGALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGT-PRGKENAVAALLE 640
Query: 405 ICFTDRTRTRE-IMEEENANGTLSRLAENGTSRAKRKANG---ILERLNKAAL 453
+C + E ++ G L L GT RA+RKA + +R AA+
Sbjct: 641 LCRSGGAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLARVFQRRENAAM 693
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 400 (145.9 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 124/391 (31%), Positives = 192/391 (49%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P +FRCPI+ E+M DPVV+A GQT+DR I W+ G+ TCP+T QVL HT L+PN ++
Sbjct: 275 PADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRALK 334
Query: 137 EMISQWCKEHGI--EL-------PKPIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKEA 187
+I WC++ I EL P P K+ E ++ ++ L+EK+S ++D
Sbjct: 335 NLIVLWCRDQKIPFELYGDGGGEPAPCKEAVE-----FTKMMVSFLIEKLS--VADSNGV 387
Query: 188 AKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDEN 247
ELR L K + RA E+ AIP L+ L A P L + +TTILNLSI ++N
Sbjct: 388 VFELRALAKSDTVARACIAEA-GAIPKLVRYL----ATECPSLQINAVTTILNLSILEQN 442
Query: 248 KRLVAENPLAIPLLIDSVRTG-TIETRRNXXXXXXXXXXXXXNKLIIG-KLGAMTPLIDL 305
K + E A+ +I+ +R+G T E + N + +G K ++ L+DL
Sbjct: 443 KTRIMETDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDL 502
Query: 306 LEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDELLAILAMLSS 365
++G + +D AI +L EN R V AG + E L +E +A++ +
Sbjct: 503 AKQGPTSSKRDALVAILNLVAERENVGRFVEAGVMGAAGDAFQE--LPEEAVAVVEAVVR 560
Query: 366 HQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEENANGT 425
+ I L ++RE + +E+ AA L +C R E++ E A
Sbjct: 561 RGGLMAVSAAFSLIRLLGEVMREGA-DTTRESAAATLVTMC---RKGGSELVAEMAAIPG 616
Query: 426 LSRLAEN----GTSRAKRKANGILERLNKAA 452
+ R+ GT+R RKA ++ L + A
Sbjct: 617 IERVIWEMIGAGTARGGRKAASLMRYLRRWA 647
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 111/379 (29%), Positives = 193/379 (50%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHT-VLIPNHLV 135
P +FRCPIS EIM+DPV+L +G TFDR IQ+W+D GNRTCP T+ LS T LIPNH +
Sbjct: 6 PNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHAL 65
Query: 136 REMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKEAAKELRLLT 195
R +I + E +P T ++ S++ +++L+ + SS+ S + + +RL T
Sbjct: 66 RSLILNFAHVSLKESSRP--RTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRL-T 122
Query: 196 KRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENK-RLVAEN 254
KR R ES A+ L + + L E ++ +LNLS+ D+NK LVA+
Sbjct: 123 KRDSSIRRKVTES-GAVRAALDCVD----SCNQVLQEKSLSLLLNLSLEDDNKVGLVADG 177
Query: 255 PLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKL-GAMTPLIDLLEEGHPLA 313
I ++ +R G+ + + NK IG A++ L+ LL G+
Sbjct: 178 --VIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDRE 235
Query: 314 MKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDELLAILAMLSSHQDAIEEI 373
K+ A+A+++LC +N++R V G+V +++ +S ++ + +L +L + EE+
Sbjct: 236 RKESATALYALCSFPDNRKRVVDCGSVPILVEAA--DSGLERAVEVLGLLVKCRGGREEM 293
Query: 374 GEL-GAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEENANGTLS---RL 429
++ G + L+ ++R + + IL +C + EI++E G +
Sbjct: 294 SKVSGFVEVLVNVLRNGNL-KGIQYSLFILNCLCCC----SGEIVDEVKREGVVEICFGF 348
Query: 430 AENGTSRAKRKANGILERL 448
+N + + +R A ++ L
Sbjct: 349 EDNESEKIRRNATILVHTL 367
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 99/285 (34%), Positives = 161/285 (56%)
Query: 168 SHLNSLLEKMSSSLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTD 227
+HL S L+ S S+ +QK+AA E+RLL+K P R ++ AI L+S +S +D
Sbjct: 65 NHLVSHLDS-SYSIDEQKQAAMEIRLLSKNKPENRIKIAKA-GAIKPLISLIS----SSD 118
Query: 228 PGLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXX 287
L E +T ILNLS+ DENK +A + AI L+ +++ GT + N
Sbjct: 119 LQLQEYGVTAILNLSLCDENKESIASSG-AIKPLVRALKMGTPTAKENAACALLRLSQIE 177
Query: 288 XNKLIIGKLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKI 347
NK+ IG+ GA+ L++LLE G A KD ++A++SLC ENK RAV +G ++ ++ +
Sbjct: 178 ENKVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELM 237
Query: 348 ME--NSLVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNI 405
+ +++VD+ ++++L S ++ I E G +P L+ I+ T +R KE +IL +
Sbjct: 238 ADFGSNMVDKSAFVMSLLMSVPESKPAIVEEGGVPVLVEIVEVGT-QRQKEMAVSILLQL 296
Query: 406 CFTDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGILERLNK 450
C + R ++ E A L L++ GTSRAK+KA ++E L +
Sbjct: 297 C-EESVVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQ 340
Score = 116 (45.9 bits), Expect = 0.00061, P = 0.00061
Identities = 47/215 (21%), Positives = 96/215 (44%)
Query: 246 ENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKLGAMTPLIDL 305
EN+ +A+ AI LI + + ++ + NK I GA+ PL+
Sbjct: 96 ENRIKIAKAG-AIKPLISLISSSDLQLQEYGVTAILNLSLCDENKESIASSGAIKPLVRA 154
Query: 306 LEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSL---VDELLAILAM 362
L+ G P A ++ A A+ L + ENK +GA+ +++ + D A+ ++
Sbjct: 155 LKMGTPTAKENAACALLRLSQIEENKVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSL 214
Query: 363 LSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEENA 422
S+ ++ I + + G + L+ ++ + N + +A + ++ + ++ + EE
Sbjct: 215 CSAKENKIRAV-QSGIMKPLVELMADFGS--NMVDKSAFVMSLLMSV-PESKPAIVEEGG 270
Query: 423 NGTLSRLAENGTSRAKRKANGILERLNKAALIVHT 457
L + E GT R K A IL +L + +++ T
Sbjct: 271 VPVLVEIVEVGTQRQKEMAVSILLQLCEESVVYRT 305
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 99/298 (33%), Positives = 163/298 (54%)
Query: 156 DTDEDVVTDASRSHLNSLLEKMSSSLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLL 215
D +DV+ + +HL S SSS+ +QK+AA E+RLL+K P R ++ AI L
Sbjct: 56 DNSDDVIRNLI-THLES-----SSSIEEQKQAAMEIRLLSKNKPENRIKLAKA-GAIKPL 108
Query: 216 LSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRN 275
+S +S +D L E +T +LNLS+ DENK ++ + PL ++++R GT T+ N
Sbjct: 109 VSLIS----SSDLQLQEYGVTAVLNLSLCDENKEMIVSSGAVKPL-VNALRLGTPTTKEN 163
Query: 276 XXXXXXXXXXXXXNKLIIGKLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAV 335
NK+ IG+ GA+ L++LLE G A KD ++A++SLC ENK RAV
Sbjct: 164 AACALLRLSQVEENKITIGRSGAIPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAV 223
Query: 336 HAGAVRVILRKIM--ENSLVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCER 393
+G ++ ++ ++ E+ +VD+ ++ +L S ++ + E G +P L+ I+ T +R
Sbjct: 224 ESGIMKPLVELMIDFESDMVDKSAFVMNLLMSAPESKPAVVEEGGVPVLVEIVEAGT-QR 282
Query: 394 NKENCAAILYNICFTDRTRTREIMEEENANGTLSRLAENGTSR-AKRKANGILERLNK 450
KE +IL +C + R ++ E A L L++ SR AK KA ++E L +
Sbjct: 283 QKEISVSILLQLC-EESVVYRTMVAREGAVPPLVALSQGSASRGAKVKAEALIELLRQ 339
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 47/221 (21%), Positives = 100/221 (45%)
Query: 241 LSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKLGAMT 300
LS + R+ AI L+ + + ++ + NK +I GA+
Sbjct: 88 LSKNKPENRIKLAKAGAIKPLVSLISSSDLQLQEYGVTAVLNLSLCDENKEMIVSSGAVK 147
Query: 301 PLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMEN----SLVDEL 356
PL++ L G P ++ A A+ L + ENK +GA+ +++ ++EN + D
Sbjct: 148 PLVNALRLGTPTTKENAACALLRLSQVEENKITIGRSGAIPLLVN-LLENGGFRAKKDAS 206
Query: 357 LAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREI 416
A+ ++ S++++ + E G + L+ ++ + E + + +A + N+ + ++
Sbjct: 207 TALYSLCSTNENKTRAV-ESGIMKPLVELMIDF--ESDMVDKSAFVMNLLMS-APESKPA 262
Query: 417 MEEENANGTLSRLAENGTSRAKRKANGILERLNKAALIVHT 457
+ EE L + E GT R K + IL +L + +++ T
Sbjct: 263 VVEEGGVPVLVEIVEAGTQRQKEISVSILLQLCEESVVYRT 303
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 359 (131.4 bits), Expect = 4.4e-32, P = 4.4e-32
Identities = 101/309 (32%), Positives = 165/309 (53%)
Query: 142 WCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKM-SSSLSDQKEAAKELRLLTKRMPL 200
W + GI +P +++T + + + + L++ + SSSL Q+EA +R+L +
Sbjct: 400 W-RHPGI-IPATVRETGS---SSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTD 454
Query: 201 FRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLVAENPLAIPL 260
R + +AIP L+S L TD + D +T +LNLSI+D NK L+AE+ +PL
Sbjct: 455 NRIVIARC-EAIPSLVSLLY----STDERIQADAVTCLLNLSINDNNKSLIAESGAIVPL 509
Query: 261 LIDSVRTGTIE-TRRNXXXXXXXXXXXXXNKLIIGKLGAMTPLIDLLEEGHPLAMKDVAS 319
I ++TG +E + N K IG+ GA+ PL+DLL G KD A+
Sbjct: 510 -IHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAAT 568
Query: 320 AIFSLCILLENKRRAVHAGAVRVILRKIMENS--LVDELLAILAMLSSHQDAIEEIGELG 377
A+F+L I ENK + + AGAVR ++ ++M+ + +V++ + +LA L++ ++ IGE G
Sbjct: 569 ALFNLSIHHENKTKVIEAGAVRYLV-ELMDPAFGMVEKAVVVLANLATVREGKIAIGEEG 627
Query: 378 AIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEENANGTLSRLAENGTSRA 437
IP L+ ++ E R KEN A L +C T + + E L L ++GT+R
Sbjct: 628 GIPVLVEVV-ELGSARGKENATAALLQLC-THSPKFCNNVIREGVIPPLVALTKSGTARG 685
Query: 438 KRKANGILE 446
K KA +L+
Sbjct: 686 KEKAQNLLK 694
Score = 322 (118.4 bits), Expect = 4.5e-28, P = 4.5e-28
Identities = 97/353 (27%), Positives = 168/353 (47%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P +FRC +S E+MTDPV++A+GQTF+R IQ+W+D G CP+TRQ LSHT L PN +VR
Sbjct: 241 PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVR 300
Query: 137 EMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKEA--AKELRLL 194
++ WC+ + + P P+ +++ + L + SSS + E+ A+ELR +
Sbjct: 301 AFLASWCETNNVYPPDPL-----ELIHSSEPFPLLVESVRASSSENGHSESLDAEELRQV 355
Query: 195 TKRMPLFRALFGE---STDAIPLLLSPLSPGRADTDPGLLEDLITT---ILNLSIHDENK 248
R + E T + S R++T E+ I+ ++ +
Sbjct: 356 FSRSASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHPGIIPATVRETGS 415
Query: 249 RLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXX-NKLIIGKLGAMTPLIDLLE 307
E + LID +++ +++T+R N+++I + A+ L+ LL
Sbjct: 416 SSSIETE--VKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLY 473
Query: 308 EGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDEL----LAILAML 363
D + + +L I NK +GA+ V L +++ ++E A L L
Sbjct: 474 STDERIQADAVTCLLNLSINDNNKSLIAESGAI-VPLIHVLKTGYLEEAKANSAATLFSL 532
Query: 364 SSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREI 416
S ++ EIGE GAI L+ ++ + K++ A L+N+ +T+ I
Sbjct: 533 SVIEEYKTEIGEAGAIEPLVDLLGSGSLS-GKKDAATALFNLSIHHENKTKVI 584
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 97/277 (35%), Positives = 148/277 (53%)
Query: 178 SSSLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITT 237
SSS++ ++ AA +LRLL K R L GES AI L+ PL R + DP E +T
Sbjct: 194 SSSVAIKRSAAAKLRLLAKNRADNRVLIGES-GAIQALI-PLL--RCN-DPWTQEHAVTA 248
Query: 238 ILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKLG 297
+LNLS+HD+NK ++A AI L+ ++TGT +++N NK IG G
Sbjct: 249 LLNLSLHDQNKAVIAAGG-AIKSLVWVLKTGTETSKQNAACALLSLALLEENKGSIGACG 307
Query: 298 AMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENS--LVDE 355
A+ PL+ LL G KD + ++ LC L +NK RAV AGAV+ ++ + E + ++
Sbjct: 308 AIPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMAEK 367
Query: 356 LLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTRE 415
+ +L+ L++ D E I E G I L+ I + + + KE L +C +D R R
Sbjct: 368 AMVVLSSLAAIDDGKEAIVEEGGIAALVEAIEDGSV-KGKEFAILTLLQLC-SDSVRNRG 425
Query: 416 IMEEENANGTLSRLAENGTS--RAKRKANGILERLNK 450
++ E A L L+++G+ RAKRKA +L L +
Sbjct: 426 LLVREGAIPPLVGLSQSGSVSVRAKRKAERLLGYLRE 462
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 115/396 (29%), Positives = 189/396 (47%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
PY FRCPIS ++M+DPV ++ GQT+DR I W+ GN TCP TR LS LIPNH +R
Sbjct: 15 PYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHTLR 74
Query: 137 EMISQWC---KEHGIE-LPKPIKDTDEDVVTDASRSHLN--SLLEKMSSSLSDQKEAAKE 190
+I +WC + +G+E +P P + D V RS L+ S + S+ + A +
Sbjct: 75 RLIQEWCVANRSNGVERIPTPKQPADPISV----RSLLSQASAITGTHVSVRSRAAAIRR 130
Query: 191 LRLLTKRMPLFRALF-GESTDAI--PLLLSPLSPGRADTDPGLLEDLITTILNLSIHDEN 247
LR L + R L G + I +L + + ++ L+ + + ++ L + +
Sbjct: 131 LRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSE--LVSESLALLVLLHMTETE 188
Query: 248 KRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXN---KLII-GKLGAMTPLI 303
VA +P + + + +IE R N + KLII G ++
Sbjct: 189 CEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVL 248
Query: 304 DLLEE--GHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKI---MENSLVDELLA 358
DLL+ A+K AIF+LC++ + + A+ AGA +++ ++ + + LA
Sbjct: 249 DLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGLA 308
Query: 359 ILAMLSSHQDAIEEIGELG-AIPCLLR-IIRESTCERNKENCAAILYNICFTDRTRTREI 416
+ +L + GE +P +++ I+R S +R E A L +C T R R+
Sbjct: 309 TVELLCRLPEGCAAFGEHALTVPLMVKTILRVS--DRATEYAAGALLALC-TAEERCRD- 364
Query: 417 MEEENANGTLSRLA----ENGTSRAKRKANGILERL 448
E A G +++L + T RAKRKA +L+ L
Sbjct: 365 --EAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLL 398
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 343 (125.8 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 106/390 (27%), Positives = 194/390 (49%)
Query: 79 EFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREM 138
+ RCPIS EIM+DPVVL +G T+DR I +W GN TCP+T + L TVL+ N V+++
Sbjct: 281 DLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQV 340
Query: 139 ISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLL-EKMSSSL--SDQKEAAK---ELR 192
I + K++G+ + + K DV + L E ++ L D++E K E+R
Sbjct: 341 IQSYSKQNGVVMGQKGKKK-VDVAESLAAEEAGKLTAEFLAGELIKGDEEEMVKALVEIR 399
Query: 193 LLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENK-RLV 251
+LTK +R+ E+ + L+ L R+D DP + E+ + I+NLS K R+V
Sbjct: 400 ILTKTSTFYRSCLVEA-GVVESLMKIL---RSD-DPRIQENAMAGIMNLSKDIAGKTRIV 454
Query: 252 AENPLAIPLLIDSVRTGTI-ETRRNXXXXXXXXXXXXXNKLIIGKLGAMTP-LIDLLE-- 307
E+ + L+++ + G E+R+ +IG++ P L+ +++
Sbjct: 455 GEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSC 514
Query: 308 EGHPLAMKDVASAIFSLCILL-ENKRRAVHAGAVRVILRKIMENSLVD----ELLAILAM 362
+ A ++ AI SL + +N R + AG V V+L + + D + +AILA
Sbjct: 515 DYGDSAKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILAK 574
Query: 363 LSSHQDAIEEIGELGAIPCLLRIIRESTCE-RNKENCAAILYNICFTDRTRT-REIMEEE 420
++ + D + + G + ++I+ S K++C A+L N+C + + +
Sbjct: 575 MAEYPDGMISVLRRGGLKLAVKILGSSEVSPATKQHCVALLLNLCHNGGSDVVGSLAKNP 634
Query: 421 NANGTLSRLAENGTSRAKRKANGILERLNK 450
+ G+L + NG +KA+ +++ +++
Sbjct: 635 SIMGSLYTASSNGELGGGKKASALIKMIHE 664
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 263 (97.6 bits), Expect = 2.8e-30, Sum P(2) = 2.8e-30
Identities = 81/292 (27%), Positives = 134/292 (45%)
Query: 163 TDASRSHLN----SLLEKM-SSSLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLS 217
TD S S ++ + K+ + + D ++ LR +T+ R TD I L
Sbjct: 225 TDHSSSPMSPEEEEIFNKLRGTDIFDHEQGLILLRKMTRSSEDLRVSL--CTDRILSFLR 282
Query: 218 PLSPGRADTDPGLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXX 277
L R + + + +++NLS+ +NK + + +PLLID +++GT E + +
Sbjct: 283 SLLVSRYNL---VQTNAAASVVNLSLEKQNKVKIVRSGF-VPLLIDVLKSGTTEAQEHVA 338
Query: 278 XXXXXXXXXXXNKLIIGKLGAMTPLIDLLEEGHP-LAMKDVASAIFSLCILLENKRRAVH 336
NK++IG LGA+ PL+ L A +D A A++ L ++ N+ R V
Sbjct: 339 GALFSLALEDENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVR 398
Query: 337 AGAVRVILRKIMENSLVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRE---STCER 393
AGAV +L + +L +L L++ D + + A+ L+ +RE E
Sbjct: 399 AGAVPTLLSMVRSGDSTSRILLVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEA 458
Query: 394 NKENCAAILYNICFTDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGIL 445
+ENC A+L +C R R + E A L + ENG R K KA+ IL
Sbjct: 459 ARENCVAVLLTLC-QGNLRFRGLASEAGAEEVLMEVEENGNERVKEKASKIL 509
Score = 137 (53.3 bits), Expect = 2.8e-30, Sum P(2) = 2.8e-30
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQ--RWLDEGNRTCPQTRQVLSHTVLIPNHL 134
P EF CPI+G +M+DPVV+++GQTF+R +Q R L TR LS TV IPN
Sbjct: 32 PPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLS-TV-IPNLA 89
Query: 135 VREMISQWCKEHGIELPKP 153
++ I WC ++ P+P
Sbjct: 90 MKSTIFSWCDRQKVDHPRP 108
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 256 (95.2 bits), Expect = 4.9e-29, Sum P(2) = 4.9e-29
Identities = 77/281 (27%), Positives = 139/281 (49%)
Query: 172 SLLEKMSSS-LSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGL 230
+LL K+ S+ +S+ +EA +R +T+ R +T I L S L R T
Sbjct: 232 ALLTKLKSNRISEIEEALISIRRITRIDESSRISLC-TTRVISALKS-LIVSRYAT---- 285
Query: 231 LEDLITTIL-NLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXN 289
++ +T +L NLS+ NK + + + +P LID ++ G++E + + N
Sbjct: 286 VQVNVTAVLVNLSLEKSNKVKIVRSGI-VPPLIDVLKCGSVEAQEHSAGVIFSLALEDEN 344
Query: 290 KLIIGKLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIME 349
K IG LG + PL+ L+ G L D A A++ L ++ N+ + V GAV+++L +
Sbjct: 345 KTAIGVLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSL 404
Query: 350 NSLVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRES--TCERNKENCAAILYNICF 407
++ +L IL ++S + + + G + C++ ++R E +E+C A+LY +
Sbjct: 405 GQMIGRVLLILCNMASCPVSRPALLDSGGVECMVGVLRRDREVNESTRESCVAVLYGLSH 464
Query: 408 TDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGILERL 448
R + + NA L ++ +G RAK+KA +LE L
Sbjct: 465 DGGLRFKGLAMAANAVEELVKVERSGRERAKQKARRVLEVL 505
Score = 133 (51.9 bits), Expect = 4.9e-29, Sum P(2) = 4.9e-29
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P EF CPISG +M DP+++++G +++R C+ G P + +IPN ++
Sbjct: 59 PAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTPPP----DFSTVIPNLALK 114
Query: 137 EMISQWCKEHGIELPKPI 154
I WC+ PKP+
Sbjct: 115 SAIHSWCERRCFPPPKPL 132
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 108/390 (27%), Positives = 179/390 (45%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRT-CPQTRQVLSHTVLIPNHLV 135
PY FRCPIS E+M DPV + GQT+DR I+ W+ GN T CP TR LS LIPNH +
Sbjct: 15 PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHTL 74
Query: 136 REMISQWC---KEHGIE-LPKPIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKEAAKEL 191
R +I +WC + +G+E +P P + D V A S S + S+ + A + L
Sbjct: 75 RRLIQEWCVANRSNGVERIPTPKQPADPTSVR-ALLSQA-SAITGTHVSVRSRAAALRRL 132
Query: 192 RLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRL- 250
R + R L + +A +L+ L ++ L+ + + ++ L I + N+ +
Sbjct: 133 RGFARDSDKNRVLIA-AHNATEILIKILFSETTSSE--LVSESLALLVMLPITEPNQFVS 189
Query: 251 VAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKLG----AMTPLIDLL 306
++ +P + L + +IETR N + + G + ++DLL
Sbjct: 190 ISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGVLDLL 249
Query: 307 EE--GHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKI---MENSLVDELLAILA 361
A+K +F+LC + + A+ AGA +++ ++ + + LA +
Sbjct: 250 RNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALATVE 309
Query: 362 MLSSHQDAIEEIGELG-AIPCLLR-IIRESTCERNKENCAAILYNICFTDRTRTREIMEE 419
+L + GE +P L++ I+R S +R E A L +C T R RE
Sbjct: 310 LLCRTPEGCAAFGEHALTVPLLVKTILRVS--DRATEYAAGALLALC-TAEERWREEAAG 366
Query: 420 ENANGTLSRLAENG-TSRAKRKANGILERL 448
L + ++ T RAK+KA +L+ L
Sbjct: 367 AGVVVQLLLMVQSECTERAKKKAQKLLKLL 396
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 318 (117.0 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 107/389 (27%), Positives = 184/389 (47%)
Query: 82 CPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREMISQ 141
CPIS EIMTDPVV+ G T+DR I +W GN TCP T ++L+ T L+ N VR++I +
Sbjct: 294 CPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRK 353
Query: 142 WCKEHGIELP--KPIKDTDEDVVTDA-SRSHLNSLLEK-MSSSLSDQKE-----AAKELR 192
CK +GI L + + +DVV ++ + L+ K ++S L + E A +E+R
Sbjct: 354 HCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIYRAVREIR 413
Query: 193 LLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLVA 252
+ TK R+ ++ PLL LS D + E+ + ILNLS H K +A
Sbjct: 414 VQTKTSSFNRSCLVKAGAVTPLL-KLLS----SVDIRIQENAMAGILNLSKHVTGKSKIA 468
Query: 253 ENPLAIPLLIDSVRTGT-IETRRNXXXXXXXXXXXXXNKLIIGKLGAMTP-LIDLL--EE 308
L I L++ + G ETR +IG+ P L++++ ++
Sbjct: 469 GEGLKI--LVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDD 526
Query: 309 GHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKI----MENSLVDELLAILAMLS 364
A + A+ L + +N R + AGAV ++L + + L + LA LA L+
Sbjct: 527 YGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTADCLATLAKLA 586
Query: 365 SHQDAIEEIGELGAIPCLLRIIR--ESTCERNKENCAAILYNICFTD-RTRTREIMEEEN 421
+ D + G + ++I+ E + K++C ++ N+C R +++
Sbjct: 587 EYPDGTIGVIRRGGLKLAVKILSSSEDSPVAVKQHCVGLILNLCLNGGRDVVGVLVKNSL 646
Query: 422 ANGTLSRLAENGTSRAKRKANGILERLNK 450
G+L + NG +KA+ ++ +++
Sbjct: 647 VMGSLYTVLSNGEYGGSKKASALIRMIHE 675
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 241 (89.9 bits), Expect = 3.2e-25, Sum P(2) = 3.2e-25
Identities = 39/85 (45%), Positives = 62/85 (72%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P E RCPIS ++M DPV++A+GQT++R CI++W +G+ TCP+T+Q L H L PN+ V+
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 137 EMISQWCKEHGIELPK-PIKDTDED 160
+I+ WC+++G ++P P + D D
Sbjct: 333 GLIASWCEQNGTQIPSGPPESQDLD 357
Score = 120 (47.3 bits), Expect = 3.2e-25, Sum P(2) = 3.2e-25
Identities = 64/303 (21%), Positives = 129/303 (42%)
Query: 154 IKDTDEDVVTDAS-RSHLNSLLEKMSSS--LSDQKEAAKELRLLTKRMPLFRALFGESTD 210
+ D D++ +D + LL ++ L + + +++RLL K R G +
Sbjct: 408 VSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKKCKVVEKIRLLLKDDEEARIFMG-ANG 466
Query: 211 AIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDE-NKRLVAENPLAIPLLIDSVRTGT 269
+ LL L D + + + NL++++ NK L+ + + I LL + +
Sbjct: 467 FVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLTSGV-IRLLEKMISSA- 524
Query: 270 IETRRNXXXXXXXXXXXXXNKLIIGKLGAMTPLIDLLEEGHPLAMK-DVASAIFSLCILL 328
E+ + K +IG A+ L+ LL++ K D A+++L
Sbjct: 525 -ESHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIETQCKLDALHALYNLSTYS 583
Query: 329 ENKRRAVHAGAVRVI---LRKIMENSLVDELLAILAMLSSHQDAIEE-IGELGAIPCLLR 384
N + + ++ + L EN +++ LA+L L+S Q+ +E + G I L
Sbjct: 584 PNIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLAT 643
Query: 385 IIR--ESTCERNKENCAAILYNICFTDRTRTREIMEEENANGTLSRLAENGTSRAKRKAN 442
++ ++T + +C IL N R +++ +E +L ++ NGT R + K+
Sbjct: 644 VLDMGDTTEQEQAVSCLLILCN----GRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQ 699
Query: 443 GIL 445
+L
Sbjct: 700 KLL 702
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 193 (73.0 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 67/283 (23%), Positives = 124/283 (43%)
Query: 178 SSSLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITT 237
SS + DQ++ +R +T+ R P +LS L + + + +
Sbjct: 235 SSEIFDQEQGLIMMRKMTRTNDEARVSL-----CSPRILSLLKNMIVSRYSLVQTNALAS 289
Query: 238 ILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKLG 297
++NLS+ +NK + +P+LID +++G+ E + + NK+ IG LG
Sbjct: 290 LVNLSLDKKNKLTIVRLGF-VPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMPIGVLG 348
Query: 298 AMTPLIDLLEEGHPLAMK-DVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDEL 356
A+ PL+ L + D A A++ L + N+ + V GAV + +
Sbjct: 349 ALQPLLHALRAAESDRTRHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVRSGESASRA 408
Query: 357 LAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCE-----RN----KENCAAILYNICF 407
L ++ L+ + + + A+ L+ +RE E R+ +ENC A L+ +
Sbjct: 409 LLVICNLACCSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARENCVAALFALSH 468
Query: 408 TDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGILERLNK 450
+ R + + +E A L + E GT RA+ KA IL+ + +
Sbjct: 469 -ESLRFKGLAKEARAVEVLKEVEERGTERAREKAKKILQLMRE 510
Score = 146 (56.5 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQ--RWLDEGNRTCPQTRQVLSHTVLIPNHL 134
P EF CPIS +M+DPVV+++GQTF+R C+Q R L+ + + + +IPN
Sbjct: 34 PVEFLCPISKSVMSDPVVVSSGQTFERVCVQVCRDLNFIPKLNDDEESLPDFSNIIPNLN 93
Query: 135 VREMISQWCKEHGIELPKP 153
++ I WC G+ P+P
Sbjct: 94 MKSTIDTWCDTVGVSRPQP 112
Score = 116 (45.9 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 74/307 (24%), Positives = 122/307 (39%)
Query: 157 TDEDVVTDASRSHLNSLLEKMSSSLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLL 216
+DE V+ S L + + ++ E+ LT F +T+ ++
Sbjct: 172 SDESVIVAHSPFTPLPLTTRPACFSPSPSSSSSEIETLTHHT-FFSNSTSTATEEDEVIY 230
Query: 217 SPLSPGRA-DTDPGLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSV--RTGTIETR 273
+ L D + GL+ T N DE R+ +P + LL + + R ++T
Sbjct: 231 NKLKSSEIFDQEQGLIMMRKMTRTN----DE-ARVSLCSPRILSLLKNMIVSRYSLVQT- 284
Query: 274 RNXXXXXXXXXXXXXNKLIIGKLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRR 333
N NKL I +LG + LID+L+ G A + A IFSL + +NK
Sbjct: 285 -NALASLVNLSLDKKNKLTIVRLGFVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMP 343
Query: 334 AVHAGAVRVILRKIM----ENSLVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRES 389
GA++ +L + + + D LA L L+ +Q ++ LGA+P L ++R
Sbjct: 344 IGVLGALQPLLHALRAAESDRTRHDSALA-LYHLTLNQTNRSKLVRLGAVPALFSMVRSG 402
Query: 390 TCERNKENCAAILYNIC-FTDRTRTREIMEEENANGTL-SRLAENGTSRAKRKANGILER 447
E+ + L IC + R M + NA L +L E T + R
Sbjct: 403 ------ESASRALLVICNLACCSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSAR 456
Query: 448 LNKAALI 454
N A +
Sbjct: 457 ENCVAAL 463
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 248 (92.4 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 38/75 (50%), Positives = 59/75 (78%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P E RCPIS ++M DPV++A+GQT++R CI++W +G+ TCP+T Q LSH L PN+ V+
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 137 EMISQWCKEHGIELP 151
+IS WC+++G+++P
Sbjct: 340 ALISSWCEQNGVQVP 354
Score = 87 (35.7 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 60/292 (20%), Positives = 122/292 (41%)
Query: 159 EDVVTDASR-SHLNSLLEKMSSSLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLS 217
ED VT R + L + L + + L + +++R+L K R L GE+ + LL
Sbjct: 414 EDQVTLVERCTELLTTLTDVDT-LRKKCRVVEQIRVLLKDDEEARILMGEN-GCVEALLQ 471
Query: 218 PLSPGRADTDPGLLEDLITTILNLSI-HDENKRLVAENPLAIPLLIDSVRTGTIETRRNX 276
L + + + + NL++ ++ NK L+ + + IPLL + + + +
Sbjct: 472 FLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGI-IPLLEEMLCNP--HSHGSV 528
Query: 277 XXXXXXXXXXXXNKLIIGKLGAMTPLIDLLEEGHPLAMK-DVASAIFSLCILLENKRRAV 335
K +IG A+ +++LL + K D ++F L N +
Sbjct: 529 TAIYLNLSCLEEAKPVIGSSLAVPFMVNLLWTETEVQCKVDALHSLFHLSTYPPNIPCLL 588
Query: 336 HAGAVRVILRKIM--ENSLVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCER 393
A V + + E ++ LA+L L ++ +E+ ++ L I ++
Sbjct: 589 SADLVNALQSLTISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPN 648
Query: 394 NKENCAAILYNICFTDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGIL 445
+E ++L +C + E++ +E +L ++ NGT R + +A +L
Sbjct: 649 EQEQAVSLLLILCNHSEICS-EMVLQEGVIPSLVSISVNGTQRGRERAQKLL 699
Score = 81 (33.6 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
Identities = 51/257 (19%), Positives = 110/257 (42%)
Query: 154 IKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKEAAKELRLLTKRMPLFRALFGESTDAIP 213
+KD +E + + +LL+ + S+L++ +A+++ M LF + +
Sbjct: 450 LKDDEEARILMGENGCVEALLQFLGSALNENNASAQKVGA----MALFNLAVDNNRNKEL 505
Query: 214 LLLSPLSPGRADT--DPGLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGT-I 270
+L S + P + +P + LNLS +E K ++ + LA+P +++ + T T +
Sbjct: 506 MLASGIIPLLEEMLCNPHSHGSVTAIYLNLSCLEEAKPVIGSS-LAVPFMVNLLWTETEV 564
Query: 271 ETRRNXXXXXXXXXXXXXNKLIIGKLGAMTPLIDL-LEEGHPLAMKDVASAIFSLCILLE 329
+ + + N + + L L + + K +A + +L +
Sbjct: 565 QCKVDALHSLFHLSTYPPNIPCLLSADLVNALQSLTISDEQRWTEKSLA-VLLNLVLNEA 623
Query: 330 NKRRAVHAGAVRVILRKIMENSLVDE---LLAILAMLSSHQDAIEE-IGELGAIPCLLRI 385
K V A ++ L I++ +E +++L +L +H + E + + G IP L+ I
Sbjct: 624 GKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVSI 683
Query: 386 IRESTCERNKENCAAIL 402
T +R +E +L
Sbjct: 684 SVNGT-QRGRERAQKLL 699
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 234 (87.4 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 36/75 (48%), Positives = 58/75 (77%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P E RCPIS ++M DPV++A+GQT++R CI++W +G+ +CP+T+Q L H L PN+ V+
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 137 EMISQWCKEHGIELP 151
+I+ WC+++GI +P
Sbjct: 336 GLIASWCEQNGITVP 350
Score = 99 (39.9 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 58/296 (19%), Positives = 125/296 (42%)
Query: 156 DTDEDVVTDASRSHLNSLLEKMSSSLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLL 215
+ D ++ + ++++K L+ + + + +R+L K R L G + +
Sbjct: 414 EVDSEINVLEGYQDILAIVDK-EEDLAKKCKVVENVRILLKDNEEARILMG-ANGFVEAF 471
Query: 216 LSPLSPGRADTDPGLLEDLITTILNLSIHDE-NKRLVAENPLAIPLLIDSVRTGTIETRR 274
L L D + E + NL++++ NK L+ + + IPLL + +++
Sbjct: 472 LQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTSGV-IPLLEKMISCS--QSQG 528
Query: 275 NXXXXXXXXXXXXXNKLIIGKLGAMTPLIDLLEEGHPLAMK-DVASAIFSLCILLENKRR 333
K +IG A++ ++LL + K D A+++L N
Sbjct: 529 PATALYLNLSCLEKAKPVIGSSQAVSFFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPT 588
Query: 334 AVHAGAVRV--ILRKIMENSLVDELLAILAMLSSHQDAIEE-IGELGAIPCLLRIIRES- 389
+ + ++ +L + +++ LA+L L+S ++ EE I G I L ++
Sbjct: 589 LLSSNIIKSLQVLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGD 648
Query: 390 TCERNKENCAAILYNICFTDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGIL 445
T E+ E + L +C T +++ +E +L ++ NG+ R + K+ +L
Sbjct: 649 TVEQ--EQAVSCLVILC-TGSESCIQMVLQEGVIPSLVSISVNGSPRGRDKSQKLL 701
Score = 59 (25.8 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 48/260 (18%), Positives = 102/260 (39%)
Query: 154 IKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKEAAKELRLLTKRMPLFRALFGESTDAIP 213
+KD +E + + + + L+ + S++ D AA+E T M LF + +
Sbjct: 452 LKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQE----TGAMALFNLAVNNNRNKEL 507
Query: 214 LLLSPLSPGRADT-DPGLLEDLITTI-LNLSIHDENKRLVAENPLA---IPLLIDSVRTG 268
+L S + P + T + LNLS ++ K ++ + + LL+ +T
Sbjct: 508 MLTSGVIPLLEKMISCSQSQGPATALYLNLSCLEKAKPVIGSSQAVSFFVNLLLQDTKT- 566
Query: 269 TIETRRNXXXXXXXXXXXXXNKLIIGKLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILL 328
+ + + N + + L L G+ L ++ + + +L
Sbjct: 567 --QCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHLWIEKSLAVLLNLASSR 624
Query: 329 ENKRRAVHA-GAVRVILRKIMENSLVDELLAI--LAML-SSHQDAIEEIGELGAIPCLLR 384
E K + G + + + V++ A+ L +L + + I+ + + G IP L+
Sbjct: 625 EGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGSESCIQMVLQEGVIPSLVS 684
Query: 385 I-IRESTCERNKENCAAILY 403
I + S R+K +L+
Sbjct: 685 ISVNGSPRGRDKSQKLLMLF 704
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 224 (83.9 bits), Expect = 8.2e-19, Sum P(2) = 8.2e-19
Identities = 57/156 (36%), Positives = 85/156 (54%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNR-TCPQTRQVLSHTVLIPNHLV 135
P F CPIS +IM DPV+++ G T+DR I++WL G + +CP T+QV++ T L PNH +
Sbjct: 8 PSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHTL 67
Query: 136 REMISQWCK---EHGIE---LPKP--IKDTDEDVVTDASRSHLNSL--LEKMSSSLSDQK 185
R +I WC +GIE PKP K E ++ ++S SHLN + L+++ +S+
Sbjct: 68 RRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQIVSENT 127
Query: 186 EAAKELRLLTKRMPLFRA-LFGESTDAIPLLLSPLS 220
+ L +P F A + S D S LS
Sbjct: 128 TNKRCLE--AAEVPEFLANIVSNSVDTYNSPSSSLS 161
Score = 67 (28.6 bits), Expect = 8.2e-19, Sum P(2) = 8.2e-19
Identities = 25/116 (21%), Positives = 53/116 (45%)
Query: 297 GAMTPLIDLLEE---GHPLAMKDVASAIFS-LCILLENKRRAV-HAGAVRVILRKIMENS 351
G ++ +I+LL + ++A + LC E + + H A+ V+ +KI+ S
Sbjct: 297 GTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVS 356
Query: 352 LVDELLAILAMLS-----SHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAIL 402
+ A+ +LS + ++E+ +LG + L +++ S + KE +L
Sbjct: 357 QITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELL 412
Score = 45 (20.9 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 22/99 (22%), Positives = 45/99 (45%)
Query: 351 SLVDELLAILAMLSSHQDAIEEI--GELGA--IPCLLRIIRESTCERNKENCAAILYNIC 406
SL+DE L++L L + + A++ + + G + L +I++ E ++ A +L +
Sbjct: 183 SLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYE-SRAYAALLLKKLL 241
Query: 407 FTDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGIL 445
++E E + L + + +A R A IL
Sbjct: 242 EVADPMQIILLERELFGEVIQILHDQISHKATRSAMQIL 280
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 211 (79.3 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 37/74 (50%), Positives = 51/74 (68%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P EF+CPIS ++M DPV+++ G T+DR I+ W++ GN+TCP T VL+ IPNH +R
Sbjct: 32 PPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNHTIR 91
Query: 137 EMISQWCKEHGIEL 150
+MI WC E G L
Sbjct: 92 KMIQGWCVEKGSPL 105
Score = 72 (30.4 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 20/92 (21%), Positives = 43/92 (46%)
Query: 352 LVDELLAILA-MLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDR 410
+++E+L++L M + I ++ + C+ +++ ST + ++N A I+ I D
Sbjct: 186 MLNEILSLLTWMFPIGLEGISKLASATSFRCVAGLLK-STDDSVRQNAAFIMKEILSLDE 244
Query: 411 TRTREIMEEENANGTLSRLAENGTSRAKRKAN 442
TR E L +L + S + K++
Sbjct: 245 TRVHSFAVENGVAEALVKLIRDSVSSSSTKSS 276
Score = 63 (27.2 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 29/123 (23%), Positives = 50/123 (40%)
Query: 297 GAMTPLIDLLEEGHPLAMKDVASA----IFSLCILLENKRRAVHAGAVRVILRKIMENSL 352
G + D + + MK++ S + S + EN V V++I + +S
Sbjct: 219 GLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAV--EN---GVAEALVKLIRDSVSSSST 273
Query: 353 VDELLAILAMLSSHQDAIEEIGELGAIPCLLRII---RESTCERNKENCAAILYNICFTD 409
L+AI M+ + E E+G + + +I S CE+ A+L IC T+
Sbjct: 274 KSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSVCEK----ALAVLDAICETE 329
Query: 410 RTR 412
R
Sbjct: 330 HGR 332
Score = 49 (22.3 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 21/114 (18%), Positives = 53/114 (46%)
Query: 295 KLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAV--RVILRKIMENSL 352
++G ++ ++++ + + + + ++C E+ R V A+ ++++KI + S
Sbjct: 296 EIGLVSITVEMIVDAENSVCEKALAVLDAICET-EHGREEVRKNALVMPLLVKKIAKVSE 354
Query: 353 V---DELLAILAMLSSHQD-AIEEIGELGAIPCLLRIIRESTCERNKENCAAIL 402
+ + IL + + A+E+ LGA +L +++ E KE +L
Sbjct: 355 LATRSSMSMILKLWKTGNTVAVEDAVRLGAFQKVLLVLQVGYGEETKEKATELL 408
Score = 46 (21.3 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 31/155 (20%), Positives = 66/155 (42%)
Query: 299 MTPLIDLLEEGHPLAMKDV---ASAIFSLCI--LLENKRRAVHAGAVRVILRKIMENSLV 353
+ ++ LL P+ ++ + ASA C+ LL++ +V A I+++I+ +
Sbjct: 187 LNEILSLLTWMFPIGLEGISKLASATSFRCVAGLLKSTDDSVRQNAA-FIMKEILS---L 242
Query: 354 DELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRT 413
DE H A+E G L+++IR+S + ++ +Y +
Sbjct: 243 DETRV-------HSFAVEN----GVAEALVKLIRDSVSSSSTKSSLIAIYQMVLQKPEIA 291
Query: 414 REIMEEENANGTLSRLAENGTSRAKRKANGILERL 448
E +E + T+ + + S + KA +L+ +
Sbjct: 292 SEFLEIGLVSITVEMIVDAENSVCE-KALAVLDAI 325
Score = 45 (20.9 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 18/104 (17%), Positives = 44/104 (42%)
Query: 225 DTDPGLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSV-RTGTIETRRNXXXXXXXX 283
D + + E + + + + + V +N L +PLL+ + + + TR +
Sbjct: 309 DAENSVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLW 368
Query: 284 XXXXXNKLIIG---KLGAMTPLIDLLEEGHPLAMKDVASAIFSL 324
N + + +LGA ++ +L+ G+ K+ A+ + +
Sbjct: 369 KTG--NTVAVEDAVRLGAFQKVLLVLQVGYGEETKEKATELLKM 410
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 240 (89.5 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 88/338 (26%), Positives = 149/338 (44%)
Query: 119 QTRQVLSHTVLIPNHLVREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMS 178
++R LS T +P H R + H + +D S + K++
Sbjct: 141 RSRTSLSSTTSLPLHQTRPI------NHSTRIQSSFSTSDYSSFPPMSPEE-EEIYNKLT 193
Query: 179 S-SLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITT 237
S D ++ +LR T+ R TD I LL L R + + + +
Sbjct: 194 SVDTIDHEQGLIQLRKTTRSNETTRISL--CTDRILSLLRSLIVSRYNI---VQTNAAAS 248
Query: 238 ILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKLG 297
I+NLS+ NK + + +PLLID +++G+ E + + NK++IG LG
Sbjct: 249 IVNLSLEKPNKLKIVRSGF-VPLLIDVLKSGSTEAQEHVIGALFSLAVEEENKMVIGVLG 307
Query: 298 AMTPLIDLLEEGHP-LAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDEL 356
A+ PL+ L A +D A A++ L ++ N+ R V AGAV ++L I +
Sbjct: 308 AVEPLLHALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIRSGESASRI 367
Query: 357 LAILAMLSSHQDAIEEIGELGAIPCLLRIIREST-CERN---KENCAAILYNICFTDRTR 412
L +L L++ + + + A+ L+ +RES E + +ENC L + R
Sbjct: 368 LLLLCNLAACSEGKGAMLDGNAVSILVGKLRESGGAESDAAARENCVGALLTLS-VGNMR 426
Query: 413 TREIMEEENANGTLSRL--AENGTSRAKRKANGILERL 448
R + E A L+ + +E+G+ R K KA+ IL+ L
Sbjct: 427 FRGLASEAGAEEILTEIVESESGSGRLKEKASKILQTL 464
Score = 149 (57.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 40/99 (40%), Positives = 57/99 (57%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQ--RWLDEGNRTCPQTRQVLSHTVLIPNHL 134
P EF CPI+G +M+DPVV+A+GQTF+R +Q R L + T+ LS TV IPN
Sbjct: 11 PTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQPDLS-TV-IPNLA 68
Query: 135 VREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSL 173
++ I WC + +E P+P D V R+ ++SL
Sbjct: 69 MKSTILSWCDRNKMEHPRP---PDYAYVEGVVRTRMDSL 104
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 237 (88.5 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 82/294 (27%), Positives = 135/294 (45%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNR-TCPQTRQVLSHTVLIPNHLV 135
P+ F CPIS EIM DPV+++ G T+DR I++WL G + +CP T+Q ++ L PNH +
Sbjct: 14 PF-FLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNHTL 72
Query: 136 REMISQWCK---EHGIE-LPKPIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKEAAKEL 191
R +I WC +G+E +P P +S + L+ +SS +Q + K L
Sbjct: 73 RRLIQSWCTLNASYGVERIPTPRPPI--------CKSEIEKLIRDSASSHENQVKCLKRL 124
Query: 192 R-LLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRL 250
R ++++ R L E+ +P L+ + D++ G L D LNL H E
Sbjct: 125 RQIVSENATNKRCL--EAA-GVPEFLANIVSN--DSENGSLTD---EALNLLYHLETSET 176
Query: 251 VAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIG--------KLGAMTPL 302
V +N L + V++ T +R N L + K T +
Sbjct: 177 VLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEV 236
Query: 303 IDLLEEG-HPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDE 355
+ +L++ A K + ++C N+ +AV AG + VI+ +M+ S E
Sbjct: 237 VQILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSE 290
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 235 (87.8 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 93/405 (22%), Positives = 182/405 (44%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P F+CPIS ++M PV L G T+DR IQRWLD GN TCP T Q+L +PN ++
Sbjct: 13 PSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQ 72
Query: 137 EMISQWC----KEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKEAAKELR 192
+I+ W + H + P + +V T + +N LLE++ S + K +R
Sbjct: 73 RLINIWSDSIGRRHNGDSPVLNPPSGREVPT---KEEVNVLLERLMSL----ENLMKIVR 125
Query: 193 LLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDE---NKR 249
+ K R + + +P+L+ + + + L+ I + ++ + E N
Sbjct: 126 FV-KDSDSNREFLSKKMEFVPMLVDIIRTKKTKIE--LVIMAIRILDSIKVDRERLSNLM 182
Query: 250 LVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKL-GAMTPL---IDL 305
L + + ++ +++ G +E++ +KL+I + G +T + I +
Sbjct: 183 LANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSISI 242
Query: 306 LEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVR----VILRKIMENSLVDEL-LAIL 360
E P ++ S + ++ + + + A A+ ++L + + N V E L +L
Sbjct: 243 TESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVTEKSLKLL 302
Query: 361 AMLSSHQDAIEEI-GELGAIPCLLRIIRE--STCERNKENCAAILYNICFTDRTRTREIM 417
LSS ++ EI G+ C+ ++++ E+ IL+ +C+ R + +
Sbjct: 303 ETLSSKREGRLEICGDDNG-RCVEGVVKKLLKVSTTATEHAVTILWCLCYVFR-EDKTVE 360
Query: 418 EE-ENANGTLSRLA---ENGTSRAKRKANGILE--RLNKAALIVH 456
E E +NG L N ++ ++ A +++ + N +AL +
Sbjct: 361 ETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLKFNSSALAAY 405
>UNIPROTKB|Q6K762 [details] [associations]
symbol:PUB73 "U-box domain-containing protein 73"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 UniPathway:UPA00143 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208 EMBL:CM000139
GO:GO:0000151 EMBL:AP004864 EMBL:AK106789 RefSeq:NP_001046869.1
UniGene:Os.54797 ProteinModelPortal:Q6K762 PRIDE:Q6K762
EnsemblPlants:LOC_Os02g28870.1 GeneID:4329384
KEGG:dosa:Os02t0490000-01 KEGG:osa:4329384 Gramene:Q6K762
eggNOG:NOG240446 OMA:HLLRDMI ProtClustDB:CLSN2692738 Uniprot:Q6K762
Length = 586
Score = 233 (87.1 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 60/194 (30%), Positives = 100/194 (51%)
Query: 77 PYEF--RCPI--------SGEIMTDPVVLANGQTFDRPCI--QRWLDEGNRTCPQTRQVL 124
PYEF R PI E+M DPV+L +G + D+ Q+ + T T L
Sbjct: 174 PYEFATRWPIPIAHDGTLQAEVMRDPVILPSGYSVDQTYQNNQKRQNPWTNTSTFTDHSL 233
Query: 125 SHTVLIPNHLVREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQ 184
+++ +PNHL+R+MIS WC +H P DT + + + +L+ S + + Q
Sbjct: 234 PYSLSVPNHLLRDMISAWCLDHSDLSPSTTSDTPSTPLEPSEEEQIQRILKLFSGNSASQ 293
Query: 185 KEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIH 244
+EA K ++LLTK + + D IP+L++ ++ L E+ +T ILNL++H
Sbjct: 294 REALKLIQLLTKTTKGVQPCLAKYADIIPVLINLRRKYKSSWTQDLEEERLTIILNLTMH 353
Query: 245 DENKRLVA-ENPLA 257
+N+ ++A +N LA
Sbjct: 354 RQNREILAGQNELA 367
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 229 (85.7 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 87/349 (24%), Positives = 161/349 (46%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P F+CPIS ++M PV L+ G T+DR IQRWLD+GN TCP T Q+L + +PN +
Sbjct: 12 PCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLH 71
Query: 137 EMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKEAAKELRLLTK 196
+I W I + + D T R +N+ +E+ +D + +K LR +
Sbjct: 72 RLIDHW--SDSINRRADSESPESDTPT---RDEINAAIERFRIE-NDAR--SKILRFARE 123
Query: 197 RMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLL---EDL-ITTILNLSIHDENK--RL 250
L G+ D + +L+ +S R +D LL E + I +++ I D + L
Sbjct: 124 SDENREFLAGKD-DFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIFDRRRLSNL 182
Query: 251 VAENPL-AIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGK-LGAMTPLIDLLEE 308
+ N + ++ G + + + +KLII K G +T +I L+
Sbjct: 183 ILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVTEIIKLISS 242
Query: 309 GHPLAMKDVASAIFSLCILLENKRRAVHAGAVR----VILRKIMEN-----SLVDELLAI 359
++ + A SL I + + +R V +R L ++ + S+ ++ L +
Sbjct: 243 DSDSSLIE---ANLSLLIAIASSKR-VKLALIREKLVTKLTSLLTDPTTSVSVTEKCLKL 298
Query: 360 LAMLSSHQDAIEEIGELGAIPCLL-RIIRESTCERNKENCAAILYNICF 407
L +SS ++ EI + + ++ ++++ ST E+ +L+++C+
Sbjct: 299 LEAISSCKEGRSEICDGVCVETVVNKLMKVSTAAT--EHAVTVLWSVCY 345
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 207 (77.9 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 39/81 (48%), Positives = 53/81 (65%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P +F+CPIS E+M DPV++A+G T+DR I++W + G +TCP T VL+ IPNH +R
Sbjct: 34 PSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNHTIR 93
Query: 137 EMISQWCKEH---GIE-LPKP 153
MI WC GIE +P P
Sbjct: 94 RMIQGWCGSSLGGGIERIPTP 114
Score = 58 (25.5 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 26/128 (20%), Positives = 61/128 (47%)
Query: 329 ENKRRAVHAGAVRVILRKIM--ENSLVDELLAILAMLSSHQDAIEEI--GELGAIPCLLR 384
E R + V + + ++ ENS+ ++ L +L ++ ++ E++ +L IP L++
Sbjct: 284 ETVSRFLELDLVNITVEMLVDSENSVCEKALTVLNVICETKEGREKVRRNKL-VIPILVK 342
Query: 385 IIRESTCERNKENCAAILYNICFT-DRTRTREIMEEENANGTLSRLAENGTSRA-KRKAN 442
I + + K++ ++++ +C + D + E + A L + + G K K
Sbjct: 343 KILKIS---EKKDLVSVMWKVCKSGDGSEVEEALRL-GAFKKLVVMLQVGCGEGTKEKVT 398
Query: 443 GILERLNK 450
+L+ +NK
Sbjct: 399 ELLKMMNK 406
Score = 54 (24.1 bits), Expect = 6.5e-16, Sum P(3) = 6.5e-16
Identities = 21/89 (23%), Positives = 43/89 (48%)
Query: 320 AIFSLCILLENK--RRAVHAG--AVRVILRKIMENSLVDELLAILAMLSSHQDA--IEEI 373
A+ L ++ E K R V + ++++KI++ S +L++++ + D +EE
Sbjct: 313 ALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEKKDLVSVMWKVCKSGDGSEVEEA 372
Query: 374 GELGAIPCLLRIIRESTCERNKENCAAIL 402
LGA L+ +++ E KE +L
Sbjct: 373 LRLGAFKKLVVMLQVGCGEGTKEKVTELL 401
Score = 48 (22.0 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 225 DTDPGLLEDLITTILNLSIHD-ENKRLVAENPLAIPLLIDSV 265
D++ + E +T +LN+ E + V N L IP+L+ +
Sbjct: 304 DSENSVCEKALT-VLNVICETKEGREKVRRNKLVIPILVKKI 344
Score = 39 (18.8 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 37 GGLQVTNEALRVLSCLKDLKLKKPHSFK 64
GG E + V SC +++++ P F+
Sbjct: 11 GGSVSKKEIIPVTSCSEEVEITIPSQFQ 38
Score = 39 (18.8 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 382 LLRIIRESTCERN--KENCAAILYNICF 407
+ R+ +ES R KEN A ++ +CF
Sbjct: 149 MTRLGKESERNRKCVKENGAGLVLCVCF 176
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 193 (73.0 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 31/79 (39%), Positives = 54/79 (68%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P +F+C +S +M DPV++++G TF+R IQ+W DEGN +CP +++ L L PN ++
Sbjct: 220 PEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELK 279
Query: 137 EMISQWCKEHGIELPKPIK 155
IS+WC ++G+++ P +
Sbjct: 280 SQISEWCAKNGLDVQDPAR 298
Score = 84 (34.6 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 299 MTPLIDLLE---EGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRV--ILRKIMENSLV 353
+ PLI L+ E + A + + + L L RRA+ + V + +E+ +V
Sbjct: 419 LEPLITYLKNALERNGTAGEIIKGGLDLLLAFLSGNRRAIESLEEEVFKMFSVFLESEVV 478
Query: 354 -DELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNI 405
+E L IL +LS+H +I G++ LL+I+ ES E +E L N+
Sbjct: 479 AEEALNILEVLSNHPHGPSKITSSGSLSSLLKIV-ESQAEHLQEQAMITLKNL 530
Score = 57 (25.1 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 381 CLLRI--IRESTCERNKENCAAILYNICFTDRTRTREIMEEE-NANGTLSRLAENGTSRA 437
CL I + ES +EN +IL +C ++ E + +L ++ NGT
Sbjct: 585 CLASIAELLESNVPEEQENAISILLQLCVQKIEYCCLVVREATDIYSSLILISNNGTEEV 644
Query: 438 KRKANGILERL 448
K A+ +L L
Sbjct: 645 KVSASELLRAL 655
Score = 40 (19.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 299 MTPLIDLLEEGHPLAMKDVASAIFSLCI-------LLENKRRAVHAGAVRVILRKIMENS 351
+ + +LLE P ++ S + LC+ L+ + +++ + + E
Sbjct: 586 LASIAELLESNVPEEQENAISILLQLCVQKIEYCCLVVREATDIYSSLILISNNGTEEVK 645
Query: 352 L-VDELLAILAMLSSHQDAIEEI 373
+ ELL L + S ++ EE+
Sbjct: 646 VSASELLRALVEVDSDKEEEEEV 668
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 215 (80.7 bits), Expect = 6.6e-15, P = 6.6e-15
Identities = 88/394 (22%), Positives = 173/394 (43%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P FRCPIS ++M PV L G T+DR IQRWLD GN TCP T Q+L + IPN ++
Sbjct: 11 PTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQ 70
Query: 137 EMISQW--------CKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKEAA 188
+I W C E EL P +D D + D + +EK D +E
Sbjct: 71 RLIEIWSDSVRRRTCVESA-ELAAPTRDEIADAI-DRVK------IEKEER---DDREVL 119
Query: 189 KELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPG----LLEDLITTILNL--S 242
++ + R D + LL+ ++ +T ++++ + + +
Sbjct: 120 SKIVRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRSK 179
Query: 243 IHDENK--RLVAENPL-AIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKL-GA 298
+ D + L+ N + +++ +TG +E + + +KL+I + G
Sbjct: 180 VSDRRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAERDGL 239
Query: 299 MTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVI--LRKIMENS----- 351
+T L+ + + L++ + S++ L + KR ++ ++I + K++ +S
Sbjct: 240 ITELMKSISKDSDLSL--IESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSLS 297
Query: 352 --LVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRE--STCERNKENCAAILYNICF 407
+ ++ L +L +L+S ++ EI G CL ++++ E+ +L+++ +
Sbjct: 298 VSVTEKCLKLLEILASTKEGRSEICG-GDGECLKTVVKKLMKVSTAATEHAVTVLWSVSY 356
Query: 408 TDRT-RTREIMEEENANGTLSRLAENGTSRAKRK 440
+ + E + N + L ++ S A R+
Sbjct: 357 LFKEDKALEAVTSVNGVTKILLLLQSNCSPAVRR 390
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 191 (72.3 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 79/377 (20%), Positives = 159/377 (42%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P F CPIS E M DPV L GQT++R I +W + G+ TCP T Q L ++ PN +
Sbjct: 61 PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTLH 120
Query: 137 EMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKEAAKELRLLTK 196
++I W + + + K +D + K+ + LS+ K+ + K
Sbjct: 121 QLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLRKAKGKAKVHA-LSELKQVVMAHAIAKK 179
Query: 197 RMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLVAENPL 256
+ +F I LLSP T + + I ++NL + ++K + + P
Sbjct: 180 TVVDEGGVF-----VISSLLSPF------TSHAVGSEAIAILVNLELDSDSKAGLMQ-PA 227
Query: 257 AIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKL-IIGKLGAMTPLIDLLEEGHPL-AM 314
+ L++D + G+IET+ N + ++ + L+ L+++ +
Sbjct: 228 RVSLMVDMLNDGSIETKINCARLIGRLVEEKGFRAELVSSHSLLVGLMRLVKDRRRRNGV 287
Query: 315 KDVASAIFSLCILLENKRRAVHAGAVRVILRKI--MENSLVDELLAILAMLSSHQDA-IE 371
+ + S+ + + + V GAV ++ + ++ ++ L +L L + I
Sbjct: 288 SPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVECLESALFVLDSLCLESEGRIA 347
Query: 372 EIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEENANGTLSRLAE 431
+ IP +R++ + + E+ +IL+++C + E L + +
Sbjct: 348 LKDSVNTIPHTVRLLMKVS-EKCTNYAISILWSVCKLASEECSSLAVEVGLAAKLLLVIQ 406
Query: 432 NGTSRAKRKANGILERL 448
+G A ++ + L +L
Sbjct: 407 SGCDPALKQRSAELLKL 423
>TAIR|locus:2099634 [details] [associations]
symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
Length = 408
Score = 186 (70.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 69/291 (23%), Positives = 134/291 (46%)
Query: 162 VTDASRSHLNSLLEKMSSSLSDQKE-AAKELRLLTKRMPLFRALFGESTDAIPLLLSPLS 220
V+ +S + + +L + S D + AAKE+R LTK R F ++ + PL+ S L
Sbjct: 58 VSSSSSASIQRVLSLIRSEDCDSRLFAAKEIRRLTKTSHRCRRHFSQAVE--PLV-SML- 113
Query: 221 PGRADTDPGLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXX 280
R D+ E + +LNL++ DE ++ A+ +I+ +++ + +
Sbjct: 114 --RFDSPESHHEAALLALLNLAVKDEKNKVSIIEAGALEPIINFLQSNSPTLQEYASASL 171
Query: 281 XXXXXXXXNKLIIGKLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAV 340
NK IIG G + L+ +++ G P A D A+ +L L +N + +
Sbjct: 172 LTLSASANNKPIIGANGVVPLLVKVIKHGSPQAKADAVMALSNLSTLPDNLSMILATKPL 231
Query: 341 RVILRKIM---ENSLVDELLAIL--AMLSSHQDAIEE-IGELGAIPCLLRIIRESTCERN 394
IL + ++S E L A++ S ++A + + G + ++ ++ + +
Sbjct: 232 SPILNLLKSSKKSSKTSEKCCSLIEALMVSGEEARTGLVSDEGGVLAVVEVLENGSLQA- 290
Query: 395 KENCAAILYNICFTDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGIL 445
+E+ +L +C +DR++ RE + E L L GTS+++ KA +L
Sbjct: 291 REHAVGVLLTLCQSDRSKYREPILREGVIPGLLELTVQGTSKSRIKAQRLL 341
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 136 (52.9 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 78 YE-FRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNR-----TCPQTRQVLSHTVLIP 131
YE F CP++ ++M +PV L NGQTF+R I++W E +CP T + LS T L P
Sbjct: 26 YEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSP 85
Query: 132 NHLVREMISQW 142
+ +R I +W
Sbjct: 86 SIALRNTIEEW 96
Score = 74 (31.1 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 50/237 (21%), Positives = 107/237 (45%)
Query: 115 RTC-PQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPKPIKDTDEDV-VTDASRSHLNS 172
R C PQ ++++ + +H VR CK ++ + + + DE+ A + +
Sbjct: 141 RVCNPQLVRLITDMLKSSSHEVR------CK--ALQTLQVVVEGDEESKAIVAEGDTVRT 192
Query: 173 LLEKMSSSLSDQKEAAKELRL-LTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLL 231
+++ +S S +EAA + L+K L + G AI LL+ L+ +++ + +
Sbjct: 193 IVKFLSQEPSKGREAAVSVLFELSKSEALCEKI-GSIHGAIILLVG-LTSSKSE-NVSTV 249
Query: 232 EDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKL 291
E T+ NL +EN R +A N PLL + G+ ET+ + K+
Sbjct: 250 EKADKTLTNLERSEENVRQMAINGRLQPLLAKLLE-GSPETKVSMAFYLGVLALNNDVKV 308
Query: 292 IIGKLGAMTPLIDLLEEGHPLAMKDVA-SAIFSLCILLENKRRAVHAGAVRVILRKI 347
I+ + + LIDL+ ++ ++ A A+ ++ + + ++ G + +++ +
Sbjct: 309 IVAQTVGSS-LIDLMRT-RDMSQREAALGALNNISSFEGSAKLLINTGILPPLIKDL 363
Score = 61 (26.5 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 22/98 (22%), Positives = 41/98 (41%)
Query: 356 LLAILAMLSSHQDAIEE---IGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTR 412
L A+ +L D ++ I E I +L ++ E+ E + ++ I +
Sbjct: 703 LAALSTLLEDGLDVVQGVRLIDEADGITPILNVLLENRTENLRIRAVWMVERILRIEEI- 761
Query: 413 TREIMEEENANGTLSRLAENGTSRAKRKANGILERLNK 450
RE+ EE+N L +N R ++ A L ++K
Sbjct: 762 AREVGEEQNVTAALVDAFQNADFRTRQIAEKALRHIDK 799
Score = 51 (23.0 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 18/76 (23%), Positives = 35/76 (46%)
Query: 374 GELGAIPCLLRIIR-ESTCERNKENCAAILYNICFTDRTRTREIMEEENANGTLSRLAEN 432
G A+ L + + E+ CE+ AI+ + T +++ + E A+ TL+ L +
Sbjct: 204 GREAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTS-SKSENVSTVEKADKTLTNLERS 262
Query: 433 GTSRAKRKANGILERL 448
+ + NG L+ L
Sbjct: 263 EENVRQMAINGRLQPL 278
Score = 50 (22.7 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 35/123 (28%), Positives = 54/123 (43%)
Query: 298 AMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDELL 357
A+ L+DLL+ + K V A+ +L LLE+ V VR+I D +
Sbjct: 683 AVDKLVDLLDHEND---KVVGPALAALSTLLEDGLDVVQG--VRLI-------DEADGIT 730
Query: 358 AILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKE-NCAAILYNICFTDRTRTREI 416
IL +L ++ I + + +LRI E E +E N A L + RTR+I
Sbjct: 731 PILNVLLENRTENLRIRAVWMVERILRI-EEIAREVGEEQNVTAALVDAFQNADFRTRQI 789
Query: 417 MEE 419
E+
Sbjct: 790 AEK 792
Score = 46 (21.3 bits), Expect = 4.7e-09, Sum P(3) = 4.7e-09
Identities = 22/80 (27%), Positives = 35/80 (43%)
Query: 373 IGELGAIPCLLRIIRESTCERNKENCAA--ILYNICFTDRTRTREIMEEENANGTLSRLA 430
+G+LG+ L+ II E+T +E AA +L + D T ++ E +S++
Sbjct: 498 VGQLGS---LVSIISENTPTITEEQAAAAGLLAELPERDLVLTMRLLREGAFEKIISKIV 554
Query: 431 --ENGTSRAKRKANGILERL 448
G R R LE L
Sbjct: 555 GIRQGEIRGIRFERTFLEGL 574
Score = 46 (21.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 409 DRTRTREIMEEENANGTLSRLAENGTSRAKRKAN-GILERLNK 450
D RTR++ + E A G L+ ++ S AK N GIL L K
Sbjct: 320 DLMRTRDMSQREAALGALNNISSFEGS-AKLLINTGILPPLIK 361
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 177 (67.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 80/381 (20%), Positives = 159/381 (41%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P F CPIS E M DPV L GQT++R I +W + G+ TCP T Q L + PN +
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLH 124
Query: 137 EMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKEAAKELRLLTK 196
+I W + + + K EDV A + L+K + A EL+ +
Sbjct: 125 HLIYTWFSQKYVLMKK----RSEDVQGRAIE--ILGTLKKAKGQA--RVHALSELKQIVI 176
Query: 197 RMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLVAENPL 256
+ R E + ++ S L P T + +++ +++L + ++K + + P
Sbjct: 177 AHLMARKTVVEE-GGVSVISSLLGPF---TSHAVGSEVVAILVSLDLDSDSKSGLMQ-PA 231
Query: 257 AIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKL-IIGKLGAMTPLIDLLEEG-HPLAM 314
+ L++D + G+ ET+ N + ++ + L+ L+++ H +
Sbjct: 232 KVSLIVDMLNDGSNETKINCARLIRGLVEEKGFRAELVSSHSLLVGLMRLVKDKRHRNGV 291
Query: 315 KDVASAIFSLCILLENKRRAVHAGAVRVILRKI--MENSLVDELLAIL-AMLSSHQDAIE 371
+ + + + + V GAV ++ + ++ ++ L +L A+ + + +
Sbjct: 292 SPALRLLKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLDALCTDVEGRVA 351
Query: 372 EIGELGAIPCLLRIIRESTCERNKENCA----AILYNICFTDRTRTREIMEEENANGTLS 427
IP +R++ R ENC +IL+++C + E L
Sbjct: 352 VKDSANTIPYTVRVLM-----RVSENCTNYALSILWSVCKLAPEECSPLAVEVGLAAKLL 406
Query: 428 RLAENGTSRAKRKANGILERL 448
+ ++G A ++ + L +L
Sbjct: 407 LVIQSGCDAALKQRSAELLKL 427
>TAIR|locus:2135788 [details] [associations]
symbol:AT4G12710 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049640 EMBL:AL161534 HOGENOM:HOG000237435
EMBL:BT026433 EMBL:AK228965 IPI:IPI00547137 PIR:T06629
RefSeq:NP_193007.1 UniGene:At.33450 ProteinModelPortal:Q9SU15
SMR:Q9SU15 EnsemblPlants:AT4G12710.1 GeneID:826883
KEGG:ath:AT4G12710 TAIR:At4g12710 eggNOG:NOG281035
InParanoid:Q9SU15 OMA:MVHRSME PhylomeDB:Q9SU15
ProtClustDB:CLSN2685767 Genevestigator:Q9SU15 Uniprot:Q9SU15
Length = 402
Score = 175 (66.7 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 67/289 (23%), Positives = 128/289 (44%)
Query: 169 HLNSLLEKMSSSLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDP 228
HL+ L + L + EAAKE+R L ++ P+ + + DA ++ PL P ++
Sbjct: 49 HLSKKL--LHGDLDFRIEAAKEIRKLLRKSPVKSSARSKLADAG--VIPPLVPMLFSSNV 104
Query: 229 GLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXX 288
+ +LNL++ +E ++ A+P LI ++ R
Sbjct: 105 DARHASLLALLNLAVRNERNKIEIVKAGAVPPLIQILKLHNASLRELATAAILTLSAAPA 164
Query: 289 NKLIIGKLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIM 348
NK +I G LI +L G D +A+ +L E + A AV ++ +
Sbjct: 165 NKAMIISSGVPPLLIQMLSSGTVQGKVDAVTALHNLSACKEYSAPILDAKAVYPLIHLLK 224
Query: 349 E----NSLVDELLAILAMLSSH-QDAIEEIGEL-GAIPCLLRIIRESTCERNKENCAAIL 402
E + ++ A++ M+ SH +D I I L+ + + + + E+ L
Sbjct: 225 ECKKHSKFAEKATALVEMILSHSEDGRNAITSCEDGILTLVETVEDGS-PLSIEHAVGAL 283
Query: 403 YNICFTDRTRTREIMEEENA-NGTLSRLAENGTSRAKRKANGILERLNK 450
++C +DR + R+++ +E A G LS + GTS+++ +A +L+ L +
Sbjct: 284 LSLCRSDRDKYRKLILKEGAIPGLLSSTVD-GTSKSRDRARVLLDLLRE 331
>TAIR|locus:1005716696 [details] [associations]
symbol:AT1G08315 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 SMART:SM00185 EMBL:CP002684
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
UniGene:At.42266 UniGene:At.48169 EMBL:AK229288 IPI:IPI00546916
RefSeq:NP_849613.1 ProteinModelPortal:Q0WNZ8 SMR:Q0WNZ8
PRIDE:Q0WNZ8 EnsemblPlants:AT1G08315.1 GeneID:837352
KEGG:ath:AT1G08315 TAIR:At1g08315 eggNOG:NOG245502
InParanoid:Q0WNZ8 OMA:VAQVAGC PhylomeDB:Q0WNZ8
ProtClustDB:CLSN2690788 Genevestigator:Q0WNZ8 Uniprot:Q0WNZ8
Length = 325
Score = 166 (63.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 70/302 (23%), Positives = 137/302 (45%)
Query: 165 ASRSHLNSLLEKMSSSLSDQKEAAK--ELRLLTKRMPLFRALFGESTDAIPLLLSPLSPG 222
A R +++++ ++SS +S+Q AA ELRL++K+ P R + ++ AIP L L
Sbjct: 4 AKRRTMSTIVSRLSS-VSEQTRAAALAELRLISKQDPDSRLIIADA-GAIPYLAETLYSS 61
Query: 223 RADTDPGLLEDLITTILNLSIHDENKRLVAE---NPLAIPLLIDSVRTGTIETRRNXXXX 279
+ E+ T+LNLSI + + + L+ L T + +
Sbjct: 62 SHSSQ----ENAAATLLNLSITSREPLMSSRGLLDALSHALRHHDTTTSPAAVQSSAATI 117
Query: 280 XXXXXXXXXNKLIIG-KLGAMTPLIDLLE--EGHPLAMKDVASAIFSLCILLENKRRAVH 336
+ IIG K + LI ++ + HP ++KD A+F++ + N+ +
Sbjct: 118 YSLLIAEESYRPIIGSKRDIIFSLIHIIRYPDSHPRSIKDSLKALFAIALYPMNRSTMIS 177
Query: 337 AGAVRVILRKIMENS---LVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCE- 392
GA+ + I+++S +V++ A++A ++ +D+ + + + L ++ T
Sbjct: 178 LGAIPALFSLIVKDSRCGIVEDATAVMAQVAGCEDSEDGMRRVSGANVLADLLDPCTGSS 237
Query: 393 -RNKENCAAILYNICFTDRTRTR-EIME------EENANGTLSRLAENGTSRAKRKANGI 444
R KEN L N+ R E+ +E A + +AENG+ + ++KA +
Sbjct: 238 LRIKENSVGALLNLARCGGAAARSEVAAAVASGADEGAMEGIVYVAENGSLKGRKKAVDL 297
Query: 445 LE 446
L+
Sbjct: 298 LK 299
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 166 (63.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 44/145 (30%), Positives = 74/145 (51%)
Query: 3 NPEVE----ETESCVRKAVELKKELQRLVKAILDEDDYGGLQVTNEALRVLSCLKDL-KL 57
N E+E E+E+ + ++ + ++LQ K L + + G++ E L++ L+++ KL
Sbjct: 281 NDELEKMRSESETQITESYTVIRKLQE--KNNLSMETFRGIREEQEELKIK--LREVSKL 336
Query: 58 KKPHSFKXXXXXXXXXXXXPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTC 117
K + P F CPI+ +IM DP V A+G T++ I RW + G+ T
Sbjct: 337 KGKR--EEEEASTSNHREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETS 394
Query: 118 PQTRQVLSHTVLIPNHLVREMISQW 142
P + L HT L+PN +R I +W
Sbjct: 395 PMINKRLPHTSLVPNLALRSAIQEW 419
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 167 (63.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P F CPIS E+M +P V A+G T++ ++ WLD G+ T P T L+H L+PNH +R
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 137 EMISQWCKEH 146
I +W + +
Sbjct: 558 SAIQEWLQRN 567
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 168 (64.2 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 33/70 (47%), Positives = 42/70 (60%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
PY F CPI E+M DP V A+G T++ I+ WLD + T P T LSHT LI NH +R
Sbjct: 765 PY-FICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALR 823
Query: 137 EMISQWCKEH 146
I +W + H
Sbjct: 824 SAIQEWLQHH 833
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 160 (61.4 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 79 EFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREM 138
+F+CPIS EIM DP V A+G T++ ++WL G RT P+T + L + L+PNH +R +
Sbjct: 236 DFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRII 295
Query: 139 ISQWCKEH 146
I W +++
Sbjct: 296 IKDWLEKN 303
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 134 (52.2 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 78 YE-FRCPISGEIMTDPVVLANGQTFDRPCIQRWL----DEGNR-TCPQTRQVLSHTVLIP 131
YE F CP++ E+M DPV L NG+TF+R I++W D G +CP T Q L+ T +
Sbjct: 24 YEAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSA 83
Query: 132 NHLVREMISQW 142
+ +R I +W
Sbjct: 84 SIALRNTIEEW 94
Score = 78 (32.5 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 32/123 (26%), Positives = 59/123 (47%)
Query: 335 VHAGAVRVILRKIMENSLVDELLAILAMLSSH-QDAIE-EIG-----ELGAIPCLLRIIR 387
V GAV ++ ++++ V + A LA LSS +D ++ E G E I +L ++R
Sbjct: 669 VEGGAVEKLVA-LLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILNVLR 727
Query: 388 ESTCERNKENCAAILYNICFTDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGILER 447
E+ ER ++ I + RE+ EE++ + L +N R ++ A L+
Sbjct: 728 ENRTERLTRRAVWMVERILRIEDI-AREVAEEQSLSAALVDAFQNADFRTRQIAENALKH 786
Query: 448 LNK 450
++K
Sbjct: 787 IDK 789
Score = 68 (29.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 54/250 (21%), Positives = 103/250 (41%)
Query: 216 LSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRN 275
L PL + P + + + L ++++ K LVA+ + L+D +R+G + R
Sbjct: 273 LQPLLGKLLEGSPETKLSMASFLGELPLNNDVKVLVAQTVGSS--LVDLMRSGDMPQREA 330
Query: 276 XXXXXXXXXXXXXN-KLIIGKLGAMTPLI-DLLEEGH---PLAMKDVASAIFSLCILLE- 329
+ K++I K G + PLI DL G P+ +K+V++ I + + +
Sbjct: 331 ALKALNKISSFEGSAKVLISK-GILPPLIKDLFYVGPNNLPIRLKEVSATILANIVNIGY 389
Query: 330 --NKRRAVHAGAVRVILRKIMEN--SLVDELLAILAMLSSHQDAIEE----IGELGAIPC 381
+K V V +L I ++ +LL +L L+S + + I GAI
Sbjct: 390 DFDKATLVSENRVENLLHLISNTGPAIQCKLLEVLVGLTSCPKTVPKVVYAIKTSGAIIS 449
Query: 382 LLRIIRESTCERNKENCAAILYNIC-FTDRTRTREIMEEENANGTLSRLAENGT--SRAK 438
L++ I + + +L+N+ F + + G+L + T + +
Sbjct: 450 LVQFIEVRENDDLRLASIKLLHNLSPFMSEELAKALCGTAGQLGSLVAIISEKTPITEEQ 509
Query: 439 RKANGILERL 448
A G+L L
Sbjct: 510 AAAAGLLAEL 519
Score = 56 (24.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 37/143 (25%), Positives = 58/143 (40%)
Query: 297 GAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDEL 356
G + PL+ L EG P +AS + L L N + + A V L +M + + +
Sbjct: 271 GRLQPLLGKLLEGSPETKLSMASFLGELP--LNNDVKVLVAQTVGSSLVDLMRSGDMPQR 328
Query: 357 LAILAML---SSHQDAIEEIGELGAIPCLLRII----RESTCERNKENCAAILYNICFTD 409
A L L SS + + + + G +P L++ + + R KE A IL NI
Sbjct: 329 EAALKALNKISSFEGSAKVLISKGILPPLIKDLFYVGPNNLPIRLKEVSATILANIVNIG 388
Query: 410 RTRTREIMEEENANGTLSRLAEN 432
+ + EN L L N
Sbjct: 389 YDFDKATLVSENRVENLLHLISN 411
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 40/128 (31%), Positives = 66/128 (51%)
Query: 21 KELQRLVKAILDEDDYGGLQVTNEALR--VLSCLKDLKLKKPHSFKXXXXXXXXXXXXPY 78
KEL L K L +D L++ + LR VL +++L+ K P
Sbjct: 361 KELLNLTKESLADD----LKIESLGLRSKVLRKIEELRTK----------VKSLSSGIPD 406
Query: 79 EFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREM 138
EF CPI+ E+M DPV+ ++G ++++ ++ W+ + RT P T VL VL PN ++
Sbjct: 407 EFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLKMA 466
Query: 139 ISQWCKEH 146
I++W + H
Sbjct: 467 INRWLETH 474
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 160 (61.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 26/70 (37%), Positives = 44/70 (62%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P EF CPI+ E+M DPV+ ++G ++++ ++ W+ + RT P T +L VL PN ++
Sbjct: 405 PDEFLCPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLILPSMVLTPNRTLK 464
Query: 137 EMISQWCKEH 146
IS+W + H
Sbjct: 465 MAISRWLETH 474
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 159 (61.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P EF CPI+ EIM DPV+ A+G +++R I+ W+ NRT P T L T+L PN ++
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTPNRTLK 477
Query: 137 EMISQW 142
I +W
Sbjct: 478 MAIFRW 483
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 156 (60.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 40/128 (31%), Positives = 64/128 (50%)
Query: 21 KELQRLVKAILDEDDYGGLQVTNEALR--VLSCLKDLKLKKPHSFKXXXXXXXXXXXXPY 78
KEL L K L G L++ + LR VL +++L+ K P
Sbjct: 359 KELLHLTKESLA----GDLKIESLGLRSKVLRSIEELRAKMD----------SLSSGIPD 404
Query: 79 EFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREM 138
EF CPI+ E+M DPV+ ++G +++R ++ W+ + RT P T L VL PN ++
Sbjct: 405 EFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLKMA 464
Query: 139 ISQWCKEH 146
I++W + H
Sbjct: 465 INRWLETH 472
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 156 (60.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P EF CPI+ E+M DP++ ++G ++++ ++ W+ RT P T VLS +L PN ++
Sbjct: 404 PDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRTLK 463
Query: 137 EMISQWCKE 145
I +W E
Sbjct: 464 MAIDRWLSE 472
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 156 (60.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P EF CPI+ E+M DP++ ++G ++++ ++ W+ RT P T VLS +L PN ++
Sbjct: 405 PDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRTLK 464
Query: 137 EMISQWCKE 145
I +W E
Sbjct: 465 MAIDRWLSE 473
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 154 (59.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 29/66 (43%), Positives = 38/66 (57%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P F CPIS E+M DP + A+G T++ I WL G+ T P T L HT L+PN +R
Sbjct: 326 PQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLALR 385
Query: 137 EMISQW 142
I +W
Sbjct: 386 SAIQEW 391
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 154 (59.3 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 26/70 (37%), Positives = 43/70 (61%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P EF CPI+ E+M DPV+ ++G +++R ++ W+ + RT P T L VL PN ++
Sbjct: 405 PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLK 464
Query: 137 EMISQWCKEH 146
I++W + H
Sbjct: 465 MAINRWLETH 474
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 148 (57.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P EF CPI+ E+M DPV+ A+G ++++ ++ W+ R+ P T L VL PN ++
Sbjct: 405 PDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLPSLVLTPNRTLK 464
Query: 137 EMISQW 142
IS+W
Sbjct: 465 MAISRW 470
>TAIR|locus:2040214 [details] [associations]
symbol:AT2G25130 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
PROSITE:PS50176 SMART:SM00185 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY144104 EMBL:AY649296 IPI:IPI00540631
PIR:F84644 RefSeq:NP_180085.1 UniGene:At.39061
ProteinModelPortal:Q8H1N2 SMR:Q8H1N2 PaxDb:Q8H1N2 PRIDE:Q8H1N2
EnsemblPlants:AT2G25130.1 GeneID:817051 KEGG:ath:AT2G25130
TAIR:At2g25130 eggNOG:NOG238592 HOGENOM:HOG000243144
InParanoid:Q8H1N2 OMA:GRERGHD PhylomeDB:Q8H1N2
ProtClustDB:CLSN2683147 Genevestigator:Q8H1N2 Uniprot:Q8H1N2
Length = 468
Score = 146 (56.5 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 77/346 (22%), Positives = 147/346 (42%)
Query: 111 DEGNRTCPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHL 170
+E + C ++ + ++ P L ++++ E G+E K K+ +++ + L
Sbjct: 57 EEDDEGCSKSTIIGEDSMRKPEKL-SDLLNLAVIESGVETKK--KEETLEILKRVVKD-L 112
Query: 171 NSLLEKMSSSLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGL 230
+ E + + + AA E+RLL K R AIP L+S + + ++ L
Sbjct: 113 QAEAEAEAEAAEKKIAAASEVRLLAKDDIEARVTLA-MLGAIPPLVSMIDD-ESQSEDAL 170
Query: 231 LEDLITTILNLSI-HDENKRLVAENPLAIPLL--IDSVRTGTIETRRNXXXXXXXXXXXX 287
+ L +LNL I +D NK + + + +L ++S +
Sbjct: 171 IASLYA-LLNLGIGNDVNKAAIVKAGVVHKMLKLVESSKPPNQAIAEAIVANFLGLSALD 229
Query: 288 XNKLIIGKLGAMTPLIDLL----EEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVI 343
NK IIG GA+ L+ L E A +D A+++L I +N + + +
Sbjct: 230 SNKPIIGSSGAIIFLVKTLKNFEETSSSQAREDALRALYNLSIYHQNVSFILETDLIPFL 289
Query: 344 LRKIMENSLVDELLAILAMLSSHQDAIEEIGEL-GAIPCLLRIIRESTCERNKENCAAIL 402
L + + + + +LAIL + S + + IGE+ A P L+ ++ + + +E IL
Sbjct: 290 LNTLGDMEVSERILAILTNVVSVPEGRKAIGEVVEAFPILVDVLNWNDSIKCQEKAVYIL 349
Query: 403 YNICFTDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGILERL 448
+ R M E +L L G+ A+++A+ +LE L
Sbjct: 350 MLMAHKGYG-DRNAMIEAGIESSLLELTLVGSPLAQKRASRVLECL 394
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 149 (57.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P + CPI EIM DP + A+G T++R I+ W+ + P T+ L H+ L PNH +R
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNHTLR 768
Query: 137 EMISQWCKEHGIEL 150
I +W ++L
Sbjct: 769 SAIREWRSRSRLDL 782
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 144 (55.7 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 43/139 (30%), Positives = 63/139 (45%)
Query: 8 ETESCVRKAVELKKELQRLVKAILDEDDYGGLQVTNEALRVLSCLKDLKLKKPHSFKXXX 67
E E R +ELK++ + + E D ++ T E LR L +K S
Sbjct: 237 EIEDMKRVQIELKEQHYADCRLLEKERDEA-IKTTEELLRAL--------EKGES--SIP 285
Query: 68 XXXXXXXXXPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHT 127
P F CPIS +IM +P V A+G T++ +RWL+ G P T L +
Sbjct: 286 LQWSVSIEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENR 345
Query: 128 VLIPNHLVREMISQWCKEH 146
LIPN ++R I W ++H
Sbjct: 346 NLIPNLVLRSAIKDWLQQH 364
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P + CPI EIM +P + A+G T++R I WL++ N + P TRQ L H L PNH +R
Sbjct: 726 PSHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHNIS-PVTRQKLDHFKLTPNHTLR 784
Query: 137 EMISQW 142
I W
Sbjct: 785 SAIRDW 790
>TAIR|locus:2116792 [details] [associations]
symbol:AT4G31890 "AT4G31890" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161579 EMBL:AL049607 HOGENOM:HOG000243144
ProtClustDB:CLSN2683147 EMBL:BT033029 EMBL:AK228494 IPI:IPI00537660
PIR:T06311 RefSeq:NP_001190883.1 RefSeq:NP_194917.1
UniGene:At.44088 ProteinModelPortal:Q9SZ56 SMR:Q9SZ56 PRIDE:Q9SZ56
EnsemblPlants:AT4G31890.1 EnsemblPlants:AT4G31890.2 GeneID:829319
KEGG:ath:AT4G31890 TAIR:At4g31890 eggNOG:NOG319234
InParanoid:Q9SZ56 OMA:ASRILEC PhylomeDB:Q9SZ56 ArrayExpress:Q9SZ56
Genevestigator:Q9SZ56 Uniprot:Q9SZ56
Length = 518
Score = 144 (55.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 70/279 (25%), Positives = 118/279 (42%)
Query: 187 AAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSI-HD 245
AA E+RLL K R AIP L+S + R D + + +LNL I +D
Sbjct: 163 AASEVRLLAKEDSEARVTLA-MLGAIPPLVSMIDDSRI-VDAQIAS--LYALLNLGIGND 218
Query: 246 ENKRLVAENPLAIPLL--IDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKLGAMTPLI 303
NK + + +L I+S T E NK IIG GA+ L+
Sbjct: 219 ANKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAIIFLV 278
Query: 304 DLL----EEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDELLAI 359
L E A +D A+++L I N + + +L + + + + +LAI
Sbjct: 279 KTLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTLGDMEVSERILAI 338
Query: 360 LAMLSSHQDAIEEIGEL-GAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIME 418
L+ L + + + IG + A P L+ ++ + +E IL + R++M
Sbjct: 339 LSNLVAVPEGRKAIGLVCDAFPVLVDVLNWTDSPGCQEKATYILMLMAHKGYG-DRQVMI 397
Query: 419 EENANGTLSRLAENGTSRAKRKANGILE--RLNKAALIV 455
E L L G++ A+++A+ ILE R++K ++
Sbjct: 398 EAGIESALLELTLLGSALAQKRASRILECLRVDKGKQVL 436
Score = 38 (18.4 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 2 ANPEVEETESCVRKAVELKKELQRLVKAILDEDDYG 37
A+ E + E + + +ELQ A D DD G
Sbjct: 120 ADVETMKKEEALEVLKRVVRELQSAAAAREDNDDGG 155
>TAIR|locus:2145653 [details] [associations]
symbol:AT5G14510 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR016024
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AL163817 IPI:IPI00537670
PIR:T48624 RefSeq:NP_196955.1 UniGene:At.31922
ProteinModelPortal:Q9LY78 SMR:Q9LY78 PRIDE:Q9LY78
EnsemblPlants:AT5G14510.1 GeneID:831302 KEGG:ath:AT5G14510
TAIR:At5g14510 eggNOG:NOG303012 HOGENOM:HOG000237435
InParanoid:Q9LY78 OMA:CKEHAVG PhylomeDB:Q9LY78
ProtClustDB:CLSN2687225 Genevestigator:Q9LY78 Uniprot:Q9LY78
Length = 327
Score = 136 (52.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 67/277 (24%), Positives = 120/277 (43%)
Query: 177 MSSSLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLIT 236
+S + Q EAA EL L+++ R E ++SPL D E ++
Sbjct: 10 LSGNRESQIEAAIELTNLSRKQ---RQKLAERE-----IISPLLSMLQSQDCITTEVALS 61
Query: 237 TILNLSIHDENKRLVAENPLAIPLLIDSVRTGT-IETRRNXXXXXXXXXXXXXNKLIIGK 295
+L+L+ E ++ A+P L++ +++ T + NK+ +
Sbjct: 62 ALLSLAFGSERNKVRIVKSGAVPTLLEILQSETKMVVLELAMAFLLILSSCNKNKVKMAS 121
Query: 296 LGAMTPLIDL--LEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKI----ME 349
+ L+ L L+ A D + + +L L + + +GA +L+ I
Sbjct: 122 TRLVQLLVGLIGLDRLTIQAKVDGIATLQNLSTLHQIVPLVIASGAPYALLQVINFCDKS 181
Query: 350 NSLVDELLAILAMLSSHQ-DAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFT 408
+ L D+ +A+L + SH +++ IG GAI L+ I E + + KE+ IL IC
Sbjct: 182 SELADKAVALLENIISHSPESVSSIG--GAIGVLVEAIEEGSAQC-KEHAVGILLGICNN 238
Query: 409 DRTRTREIMEEENANGTLSRLAENGTSRAKRKANGIL 445
DR R ++ E L +++ +GT RAK A +L
Sbjct: 239 DRETNRGMILREGVMPGLLQVSVDGTRRAKEMARELL 275
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 141 (54.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P F CP+ ++M +P + A+G T+DR I+ W+ E +RT P T L + L+PNH +
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWM-ENHRTSPVTNSPLQNVNLLPNHTLY 808
Query: 137 EMISQW 142
I +W
Sbjct: 809 AAIVEW 814
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 138 (53.6 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P + CPI E+M DP++ A+G T++ I+ WL G+ T P T + LIPNH +
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 137 EMISQW 142
I W
Sbjct: 796 LAIQDW 801
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 32/96 (33%), Positives = 47/96 (48%)
Query: 47 RVLSCLKDLKLKKPHSFKXXXXXXXXXXXXPYEFRCPISGEIMTDPVVLANGQTFDRPCI 106
++L L++LK K K P F CP+ ++M +P V A+G T+DR I
Sbjct: 740 QILPALENLK-KVAE--KARNSFSGVSTQPPTHFICPLLKDVMNEPCVAADGYTYDRHAI 796
Query: 107 QRWLDEGNRTCPQTRQVLSHTVLIPNHLVREMISQW 142
+ WL E N T P T L L+PN+ + I +W
Sbjct: 797 EEWLKEHN-TSPMTDSPLHSKNLLPNYTLYTAIMEW 831
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 130 (50.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P F CPIS EIM DP V ++G T++ I+ W D G P T L + L+PN ++R
Sbjct: 436 PAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNLVPNRVLR 495
Query: 137 EMISQWCKEHGIELPKP 153
I + ++ + P P
Sbjct: 496 SFIHGYLQQ---QQPNP 509
>DICTYBASE|DDB_G0270014 [details] [associations]
symbol:DDB_G0270014 species:44689 "Dictyostelium
discoideum" [GO:2001070 "starch binding" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR002044 InterPro:IPR013784
Pfam:PF00686 PROSITE:PS50089 PROSITE:PS51166 SMART:SM00184
SMART:SM01065 dictyBase:DDB_G0270014 Prosite:PS00518
EMBL:AAFI02000005 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 SUPFAM:SSF49452 GO:GO:2001070 eggNOG:NOG254243
RefSeq:XP_646470.1 ProteinModelPortal:Q55CL1
EnsemblProtists:DDB0190739 GeneID:8617431 KEGG:ddi:DDB_G0270014
InParanoid:Q55CL1 OMA:EYKYCIS Uniprot:Q55CL1
Length = 206
Score = 121 (47.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 80 FRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLV 135
F CPI G ++ DPVV G TF PC+ +WL + R CP R ++ LI N LV
Sbjct: 16 FICPIGGGVIEDPVVTPCGHTFCNPCLIKWL-QSRRQCPTDRLPVTDKQLIQNWLV 70
>SGD|S000000739 [details] [associations]
symbol:VAC8 "Phosphorylated and palmitoylated vacuolar
membrane protein" species:4932 "Saccharomyces cerevisiae"
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
[GO:0043495 "protein anchor" evidence=IMP;IPI] [GO:0071562
"nucleus-vacuole junction assembly" evidence=IMP] [GO:0071561
"nucleus-vacuole junction" evidence=IDA;IPI] [GO:0000011 "vacuole
inheritance" evidence=IEA;IMP] [GO:0071255 "CVT vesicle assembly"
evidence=IMP] [GO:0016236 "macroautophagy" evidence=IMP]
[GO:0034727 "piecemeal microautophagy of nucleus" evidence=IMP]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0071563 "Myo2p-Vac17p-Vac8p transport complex"
evidence=IDA;IPI] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SGD:S000000739 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:COG5064 GO:GO:0000329 EMBL:BK006939 GO:GO:0043495
GO:GO:0000011 GO:GO:0016236 GeneTree:ENSGT00680000099702
EMBL:U18530 GO:GO:0042144 RefSeq:NP_010907.3 GeneID:856709
KEGG:sce:YEL009C KO:K09464 RefSeq:NP_010903.3 GeneID:856702
KEGG:sce:YEL013W KO:K08332 PANTHER:PTHR23315:SF8
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 GO:GO:0071255
EMBL:AF005267 PIR:S50446 ProteinModelPortal:P39968 SMR:P39968
DIP:DIP-5121N IntAct:P39968 MINT:MINT-517641 STRING:P39968
PaxDb:P39968 PeptideAtlas:P39968 EnsemblFungi:YEL013W
NextBio:982766 Genevestigator:P39968 GermOnline:YEL013W
GO:GO:0071563 GO:GO:0071561 GO:GO:0071562 Uniprot:P39968
Length = 578
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 48/192 (25%), Positives = 86/192 (44%)
Query: 154 IKDTDE-DVVTDASRSHLNSLLEKMSSSLSDQKEAAKELRLLTKRMPLFRALFGESTDAI 212
++D D+ D + L +L+ S +L+ Q+ AA +T++ R + E + I
Sbjct: 35 LEDKDQLDFYSGGPLKALTTLV--YSDNLNLQRSAALAFAEITEKY--VRQVSREVLEPI 90
Query: 213 PLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIET 272
+LL DP + + NL++++ENK L+ E PL I+ + +E
Sbjct: 91 LILLQ-------SQDPQIQVAACAALGNLAVNNENKLLIVEMGGLEPL-INQMMGDNVEV 142
Query: 273 RRNXXXXXXXXXXXXXNKLIIGKLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKR 332
+ N NK I GA+ PL L + H ++ A+ ++ EN++
Sbjct: 143 QCNAVGCITNLATRDDNKHKIATSGALIPLTKLAKSKHIRVQRNATGALLNMTHSEENRK 202
Query: 333 RAVHAGAVRVIL 344
V+AGAV V++
Sbjct: 203 ELVNAGAVPVLV 214
>DICTYBASE|DDB_G0293212 [details] [associations]
symbol:DDB_G0293212 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003613 Pfam:PF04564
SMART:SM00382 SMART:SM00504 dictyBase:DDB_G0293212 GO:GO:0005524
EMBL:AAFI02000200 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0017111 GO:GO:0004842 GO:GO:0000151 eggNOG:COG0507
InterPro:IPR010285 Pfam:PF05970 RefSeq:XP_629245.1
ProteinModelPortal:Q54C21 EnsemblProtists:DDB0191825 GeneID:8629127
KEGG:ddi:DDB_G0293212 InParanoid:Q54C21 OMA:RNANQEN
ProtClustDB:CLSZ2429302 Uniprot:Q54C21
Length = 846
Score = 122 (48.0 bits), Expect = 0.00047, P = 0.00047
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHT-VLIPNHLV 135
P F CPIS +IM P V +G TF+R I W D+ T++ S + +LIPN +
Sbjct: 773 PIYFLCPISQKIMEHPYVAPDGYTFERSSILEWFDKRGAISFVTKRPFSTSAILIPNRNL 832
Query: 136 REMISQWCKEH 146
+ I +W H
Sbjct: 833 KAQIQEWKNSH 843
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 121 (47.7 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P F CPI+ ++M +P V ++G T+++ I+ WL + +++ P T L+PNH +
Sbjct: 726 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQKNHKS-PMTDLPFPSDSLLPNHSLL 784
Query: 137 EMISQW 142
I +W
Sbjct: 785 SAIKEW 790
Score = 45 (20.9 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 5 EVEETESCVRKAVELKKELQRLVKAI 30
E EE +A E++KE QRL A+
Sbjct: 379 ETEERLEAEARAEEVRKEKQRLEDAL 404
>ASPGD|ASPL0000008980 [details] [associations]
symbol:AN12408 species:162425 "Emericella nidulans"
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000011 "vacuole inheritance"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000329
EMBL:BN001301 GO:GO:0000011 GO:GO:0016236 GO:GO:0042144
PANTHER:PTHR23315:SF8 HOGENOM:HOG000177331 OMA:EEIQCHA
GO:GO:0071255 GO:GO:0071563 GO:GO:0071561 GO:GO:0071562
ProteinModelPortal:C8V2Y6 EnsemblFungi:CADANIAT00007711
Uniprot:C8V2Y6
Length = 579
Score = 119 (46.9 bits), Expect = 0.00061, P = 0.00061
Identities = 48/208 (23%), Positives = 89/208 (42%)
Query: 243 IHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXXXXNKLIIGKLGAMTPL 302
I + + R V + L P+L +++ IE +R NK++I LG + PL
Sbjct: 95 ITERDVREVDRDTLE-PILF-LLQSSDIEVQRAASAALGNLAVNADNKVLIVALGGLAPL 152
Query: 303 IDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDELLAILAM 362
I + + + I +L +NK + +GA+ ++R + + A A+
Sbjct: 153 IKQMMSPNVEVQCNAVGCITNLATHEDNKAKIARSGALGPLIRLAKSKDMRVQRNATGAL 212
Query: 363 LS-SHQDAI-EEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEE 420
L+ +H D +++ GAIP L++++ S + + C L NI R R E
Sbjct: 213 LNMTHSDDNRQQLVNAGAIPVLVQLLSSSDVDV-QYYCTTALSNIAVDASNRKRLAQTES 271
Query: 421 NANGTLSRLAENGTSRAKRKANGILERL 448
+L L ++ T + + +A L L
Sbjct: 272 RLVQSLVHLMDSSTPKVQCQAALALRNL 299
>TAIR|locus:2157358 [details] [associations]
symbol:AT5G50900 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 SMART:SM00185 EMBL:CP002688 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AB017063 EMBL:BT020588
EMBL:BT033035 IPI:IPI00519624 RefSeq:NP_199903.1 UniGene:At.25502
ProteinModelPortal:Q9FI58 SMR:Q9FI58 PRIDE:Q9FI58
EnsemblPlants:AT5G50900.1 GeneID:835162 KEGG:ath:AT5G50900
TAIR:At5g50900 InParanoid:Q9FI58 OMA:NFVEENA PhylomeDB:Q9FI58
ProtClustDB:CLSN2687203 Genevestigator:Q9FI58 Uniprot:Q9FI58
Length = 555
Score = 117 (46.2 bits), Expect = 0.00096, P = 0.00096
Identities = 56/227 (24%), Positives = 99/227 (43%)
Query: 229 GLLED--LITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNXXXXXXXXXXX 286
GLL D ++ + ++S E RL A N L I L I G +E++ +
Sbjct: 121 GLLIDNGIVVSGFSISSKKEAVRLEARN-LVIRLQI-----GGVESKNSAIDSLIELLQE 174
Query: 287 XXNKLIIGKLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVI--L 344
++I + P++ L + L MK+ A+ S ++E+ + + A + ++ L
Sbjct: 175 DDKNVMICVAQGVVPVLVRLLDSCSLVMKEKTVAVISRISMVESSKHVLIAEGLSLLNHL 234
Query: 345 RKIMENS---LVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAI 401
+++E+ ++ L LS ++ IG G I LL I + + ++ A +
Sbjct: 235 LRVLESGSGFAKEKACVALQALSLSKENARAIGCRGGISSLLEICQGGS-PGSQAFAAGV 293
Query: 402 LYNICFTDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGILERL 448
L N+ T+ E EENA L + +GTS A+ A G L L
Sbjct: 294 LRNLALFGETK--ENFVEENAIFVLISMVSSGTSLAQENAVGCLANL 338
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 458 433 0.00087 118 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 77
No. of states in DFA: 608 (65 KB)
Total size of DFA: 238 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.09u 0.11s 38.20t Elapsed: 00:00:02
Total cpu time: 38.10u 0.11s 38.21t Elapsed: 00:00:02
Start: Sat May 11 04:42:31 2013 End: Sat May 11 04:42:33 2013