BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012677
(458 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 485 bits (1249), Expect = e-136, Method: Compositional matrix adjust.
Identities = 257/453 (56%), Positives = 336/453 (74%), Gaps = 9/453 (1%)
Query: 11 SCVRKAVELKKELQRLVKAILDEDDYGGLQVTNEALRVLSCLKDLKLKKPHSFKGGAAGD 70
+ + KA ELK+E+++L+ I DEDD G +Q ++ LS L++ ++K K +
Sbjct: 12 TAIAKAKELKREMKKLLIKIDDEDDLG-VQTIDQLQDALSALREATMRK--MAKSSSLEM 68
Query: 71 DHLLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLI 130
+ P EFRCP+S E+M DPVVLA+GQT+D+ IQ+WL GNRTCP+T+QVL HT L
Sbjct: 69 LETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALT 128
Query: 131 PNHLVREMISQWCKEHGIELPK---PIKDTDEDVVTDASRSHLNSLLEKMSSS-LSDQKE 186
PN L+REMIS+WCK++G+E P +++ VT + R NSLL K+SSS L DQK
Sbjct: 129 PNLLIREMISKWCKKNGLETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSNLQDQKS 188
Query: 187 AAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDE 246
AAKELRLLT++ FRALFGES D I L++PL G ++ D L ED++TT+LN+SIHD+
Sbjct: 189 AAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHG-SNPDEKLQEDVVTTLLNISIHDD 247
Query: 247 -NKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIGKLGAMTPLIDL 305
NK+LV ENP IPLLID++R GT+ TR NAAAA+F+LSALDSNK++IGK G + PLIDL
Sbjct: 248 SNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDL 307
Query: 306 LEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDELLAILAMLSS 365
LEEG+PLA+KDVA+AIF+LCI EN+ RAV GAVRV+ +KI VDELLAILAML +
Sbjct: 308 LEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGLYVDELLAILAMLVT 367
Query: 366 HQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEENANGT 425
H A+EE+GELG + LL+I RES C+RNKEN IL+ ICF+DRT+ +EI EEENA+GT
Sbjct: 368 HWKAVEELGELGGVSWLLKITRESECKRNKENAIVILHTICFSDRTKWKEIKEEENAHGT 427
Query: 426 LSRLAENGTSRAKRKANGILERLNKAALIVHTA 458
+++L+ GTSRA+RKANGIL+RL KA + HTA
Sbjct: 428 ITKLSREGTSRAQRKANGILDRLRKAMNLTHTA 460
>sp|Q3E9F7|PUB46_ARATH Putative U-box domain-containing protein 46 OS=Arabidopsis thaliana
GN=PUB46 PE=3 SV=1
Length = 458
Score = 335 bits (860), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 194/449 (43%), Positives = 288/449 (64%), Gaps = 29/449 (6%)
Query: 19 LKKELQRLVKAIL------DEDDY----GGLQVTNEALRVLSCLKDLKLKKPHSFKGGAA 68
L++ELQ+++ IL D D+ G ++ +EA+R+L+CL+ ++ K P S
Sbjct: 12 LRRELQKVLTEILNDGGGNDRDETEAFSGVVKAIDEAVRILTCLRKVESKIPES------ 65
Query: 69 GDDHLLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTV 128
D + +P EF C +S IM +PV++A+GQT+++ I WL + RTCP+T+QVLSH +
Sbjct: 66 -DISPVEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWL-KHERTCPKTKQVLSHRL 123
Query: 129 LIPNHLVREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSS--LSDQKE 186
IPNHL+ ++I+QWC + + KP +++V + S + +LL+++SSS ++DQ E
Sbjct: 124 WIPNHLISDLITQWCLVNKYDHQKP----SDELVAELFTSDIEALLQRVSSSSSVADQIE 179
Query: 187 AAKELRLLTKRMPLFRALFGEST-DAIPLLLSPLSP--GRADTDPGLLEDLITTILNLSI 243
AAKELR TK+ P R F D+I LLSPLS D+ L E+++T + NLSI
Sbjct: 180 AAKELRHQTKKFPNVRVFFVAGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFNLSI 239
Query: 244 HDENKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIGKLGAMTPLI 303
+ NK ++AEN L IPLL S++ GT ETRRNAAA L SLSA+DSNK+IIG A+ LI
Sbjct: 240 LESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIGNSEAVKALI 299
Query: 304 DLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDELLAILAML 363
DL+EEG LA K+ S +F+LCI+LENK + V AG + +KI S VDELL++LA++
Sbjct: 300 DLIEEGDLLATKEATSTVFNLCIVLENKGKVVSAGLIHAATKKIKAGSNVDELLSLLALI 359
Query: 364 SSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNIC--FTDRTRTREIMEEEN 421
S+H A+EE+ +LG I L I+R+ + EN I++N+ DR+R + + EEEN
Sbjct: 360 STHNRAVEEMDKLGFIYDLFSILRKPSSLLTGENAVVIVFNMYDRNRDRSRLKVVGEEEN 419
Query: 422 ANGTLSRLAENGTSRAKRKANGILERLNK 450
+GT ++LA+ G+ RA RKA GIL+ + +
Sbjct: 420 QHGTFTKLAKQGSVRAARKAQGILQWIKR 448
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 293 bits (751), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 167/382 (43%), Positives = 249/382 (65%), Gaps = 14/382 (3%)
Query: 76 LPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLV 135
+P EFRCPIS E+M DPV++++GQT++R CIQ+WLD G++TCP+T+Q LSHT L PN ++
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVL 287
Query: 136 REMISQWCKEHGIELPKPIKDTDEDVV---TDASRSHLNSLLEKMSSSLSD-QKEAAKEL 191
+ +ISQWC+ +GIELPK +++ + +D + L SL+ ++ S D Q+ AA E+
Sbjct: 288 KSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRAAAGEI 347
Query: 192 RLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLV 251
RLL KR R E+ AIPLL++ LS +DP E +T +LNLSIH+ NK +
Sbjct: 348 RLLAKRNVNNRICIAEA-GAIPLLVNLLS----SSDPRTQEHAVTALLNLSIHENNKASI 402
Query: 252 AENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIGKLGAMTPLIDLLEEGHP 311
++ AIP +++ ++TG++ETR NAAA LFSLS +D NK+ IG GA+ PLI+LL +G P
Sbjct: 403 VDS-HAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSP 461
Query: 312 LAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIME--NSLVDELLAILAMLSSHQDA 369
KD A+AIF+LCI NK RAV AG V ++ +++ ++DE L++L++L+ + +
Sbjct: 462 RGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEG 521
Query: 370 IEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEENANGTLSRL 429
I IP L+ +I+ + RN+EN AAIL+ +C D +T + L L
Sbjct: 522 KIVIARSEPIPPLVEVIKTGS-PRNRENAAAILWLLCSADTEQTLA-AKAAGVEDALKEL 579
Query: 430 AENGTSRAKRKANGILERLNKA 451
+E GT RAKRKA+ ILE +++A
Sbjct: 580 SETGTDRAKRKASSILELMHQA 601
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 282 bits (722), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 168/409 (41%), Positives = 246/409 (60%), Gaps = 16/409 (3%)
Query: 52 LKDLKLKKPHSFKGGAAGDDHLLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLD 111
L D L+ S D +L P EFRCPIS E+MTDPV++++GQT++R CI++WL+
Sbjct: 232 LDDAPLRLKSSLPKSRDDDRDMLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLE 291
Query: 112 EGNRTCPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPK-------PIKDTDEDVVTD 164
G+ TCP+T++ L+ ++ PN+++R +I+QWC+ +GIE PK K + D
Sbjct: 292 GGHLTCPKTQETLTSDIMTPNYVLRSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPD 351
Query: 165 ASRSHLNSLLEKMSSSL-SDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGR 223
+ + LL K++S D++ AA E+RLL K+ R S AIPLL++ L+
Sbjct: 352 DEHNKIEELLLKLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASG-AIPLLVNLLT--- 407
Query: 224 ADTDPGLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSL 283
D E +T+ILNLSI ENK + + A+P ++ ++ G++E R NAAA LFSL
Sbjct: 408 ISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSL 467
Query: 284 SALDSNKLIIGKLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVI 343
S +D NK+ IG GA+ PL+ LL EG KD A+A+F+LCI NK +AV AG V V+
Sbjct: 468 SVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVL 527
Query: 344 LRKIM--ENSLVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAI 401
+R + E+ +VDE L+ILA+LSSH D E+G A+P L+ IR S RNKEN AA+
Sbjct: 528 MRLLTEPESGMVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIR-SGSPRNKENSAAV 586
Query: 402 LYNICFTDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGILERLNK 450
L ++C ++ E ++ L +AENGT R KRKA +L R ++
Sbjct: 587 LVHLCSWNQQHLIE-AQKLGIMDLLIEMAENGTDRGKRKAAQLLNRFSR 634
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 278 bits (710), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 162/386 (41%), Positives = 238/386 (61%), Gaps = 19/386 (4%)
Query: 76 LPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLV 135
+P +FRCPIS E+M DPV++++GQT++R CI++W++ G+ TCP+T+Q L+ T L PN+++
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 136 REMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSSLS-----DQKEAAKE 190
R +I+QWC+ + IE PKP V+ S + +E + L+ DQ+ AA E
Sbjct: 316 RSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGE 375
Query: 191 LRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRL 250
+RLL KR R E+ AIPLL+ LS D + E +T +LNLSI + NK
Sbjct: 376 IRLLAKRNADNRVAIAEA-GAIPLLVGLLS----TPDSRIQEHSVTALLNLSICENNKGA 430
Query: 251 VAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIGKLGAMTPLIDLLEEGH 310
+ + AIP ++ ++ G++E R NAAA LFSLS +D NK+ IG LGA+ PL+ LL EG
Sbjct: 431 IV-SAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGT 489
Query: 311 PLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIME--NSLVDELLAILAMLSSHQD 368
KD A+A+F+LCI NK +A+ AG + + R + E + +VDE LAILA+LSSH +
Sbjct: 490 QRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPE 549
Query: 369 AIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEENAN--GTL 426
IG A+P L+ IR + RN+EN AA+L ++C D + ++E + G L
Sbjct: 550 GKAIIGSSDAVPSLVEFIRTGS-PRNRENAAAVLVHLCSGD---PQHLVEAQKLGLMGPL 605
Query: 427 SRLAENGTSRAKRKANGILERLNKAA 452
LA NGT R KRKA +LER+++ A
Sbjct: 606 IDLAGNGTDRGKRKAAQLLERISRLA 631
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 226 TDPG--LLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSL 283
T+PG ++++ + + LS H E K ++ + A+P L++ +RTG+ R NAAA L L
Sbjct: 527 TEPGSGMVDEALAILAILSSHPEGKAIIGSSD-AVPSLVEFIRTGSPRNRENAAAVLVHL 585
Query: 284 SALDSNKLI-IGKLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKR 332
+ D L+ KLG M PLIDL G + A + + L E ++
Sbjct: 586 CSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERISRLAEQQK 635
>sp|Q3E9F6|PUB47_ARATH Putative U-box domain-containing protein 47 OS=Arabidopsis thaliana
GN=PUB47 PE=3 SV=1
Length = 445
Score = 271 bits (692), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 177/446 (39%), Positives = 255/446 (57%), Gaps = 33/446 (7%)
Query: 19 LKKELQRLVKAILDEDDYGGLQ--VTNEALRVLSCLKDLKLKKPHSFKGGAAGDDHLLGL 76
L +EL +++ I D GG +EA+R+L+CL+ ++ K P S D + +
Sbjct: 15 LWRELHKVLPEIWY--DGGGKDHCEIDEAIRILTCLRKIESKNPES-------DISPVEV 65
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P EF C +S +IM +P+++A+GQTF++ I WL + RTCP+T+QVL H +IPNHL+
Sbjct: 66 PKEFICTLSNKIMIEPMLIASGQTFEKSYILEWL-KHERTCPRTKQVLYHRFMIPNHLIN 124
Query: 137 EMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSS--SLSDQKEAAKELRLL 194
E+I +WC H + PK D V D L SLL+++SS S+ DQ EAAKEL L
Sbjct: 125 EVIKEWCLIHNFDRPKT-----SDEVIDLFTGDLESLLQRISSPSSVEDQTEAAKELALK 179
Query: 195 TKRMPLFRALF-GESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLVAE 253
KR F + D+I LL+PLS D++P LE+++T + S ++NK LVAE
Sbjct: 180 AKRFSSVCVYFVAKIPDSITRLLTPLSISE-DSNPEFLENIVTALHIFSTSEKNKTLVAE 238
Query: 254 NPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIGKLGAMTPLIDLLEEGHPLA 313
NPL +PLL ++ GT+ TR ++AA + SLS DSNK+IIG + LI ++EEG LA
Sbjct: 239 NPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTDSNKIIIGNSEVLKALIHVIEEGDSLA 298
Query: 314 MKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDELLAILAMLSS--HQDAIE 371
+ SA+ +LC + E +AV G +R ++KI S V LL++LA +S+ HQ E
Sbjct: 299 TSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSNVSMLLSLLAFVSTQNHQ-TTE 357
Query: 372 EIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTD--------RTRTRE-IMEEENA 422
E+ LG I L I+R S N EN I+YNIC + R R+ ++EEEN
Sbjct: 358 EMDNLGLIYDLFSILRNSNSLVNDENAVVIVYNICKSYKALQNVVLREEKRDVVLEEENK 417
Query: 423 NGTLSRLAENGTSRAKRKANGILERL 448
+GT +RL RA A ILE +
Sbjct: 418 HGTFTRLENQEAGRATSLAKRILEWI 443
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/382 (42%), Positives = 237/382 (62%), Gaps = 14/382 (3%)
Query: 74 LGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNH 133
L +P +F CP+S E+M DPV++A GQT++R IQRW+D GN TCP+T+Q L + L PN+
Sbjct: 239 LTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNY 298
Query: 134 LVREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSS-SLSDQKEAAKELR 192
++R +IS+WC EH IE +P + S + +L++++SS S D++ A E+R
Sbjct: 299 VLRSLISRWCAEHNIE--QPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIR 356
Query: 193 LLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLVA 252
L+KR R L E+ AIP+L++ L+ D E+ IT +LNLSI++ NK L+
Sbjct: 357 SLSKRSTDNRILIAEA-GAIPVLVNLLTS----EDVATQENAITCVLNLSIYENNKELIM 411
Query: 253 ENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIGKLGAMTPLIDLLEEGHPL 312
A+ ++ +R GT+E R NAAA LFSLS D NK+IIG GA+ L+DLLE G P
Sbjct: 412 FAG-AVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPR 470
Query: 313 AMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENS---LVDELLAILAMLSSHQDA 369
KD A+A+F+LCI NK RAV AG V +++ + +++ +VDE L IL++L+++QDA
Sbjct: 471 GKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDA 530
Query: 370 IEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEENANGTLSRL 429
I + +P L+ I+ ++ RN+EN AAIL ++C D T + A L L
Sbjct: 531 KSAIVKANTLPALIGIL-QTDQTRNRENAAAILLSLCKRD-TEKLITIGRLGAVVPLMDL 588
Query: 430 AENGTSRAKRKANGILERLNKA 451
++NGT R KRKA +LE L KA
Sbjct: 589 SKNGTERGKRKAISLLELLRKA 610
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 269 bits (687), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/383 (43%), Positives = 237/383 (61%), Gaps = 16/383 (4%)
Query: 76 LPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLV 135
+P FRCPIS E+M DPV+++ GQT++R IQ+WLD G++TCP++++ L H L PN+++
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVL 307
Query: 136 REMISQWCKEHGIELPKPIKDTDEDVV-----TDASRSHLNSLLEKMSSSLSDQKEAAK- 189
+ +I+ WC+ +GIELP+ + +D R+ + SLLEK+++ ++Q+ AA
Sbjct: 308 KSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAG 367
Query: 190 ELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKR 249
ELRLL KR R E+ AIPLL+ LS DP E +T +LNLSI++ NK
Sbjct: 368 ELRLLAKRNVDNRVCIAEA-GAIPLLVELLS----SPDPRTQEHSVTALLNLSINEGNKG 422
Query: 250 LVAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIGKLGAMTPLIDLLEEG 309
+ + AI +++ ++ G++E R NAAA LFSLS +D NK+ IG GA+ LI LLEEG
Sbjct: 423 AIVDAG-AITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEG 481
Query: 310 HPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILR--KIMENSLVDELLAILAMLSSHQ 367
KD A+AIF+LCI NK RAV G V + R K +VDE LAILA+LS++Q
Sbjct: 482 TRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQ 541
Query: 368 DAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEENANGTLS 427
+ I E +IP L+ IIR + RN+EN AAIL+ +C + R + E A+ L
Sbjct: 542 EGKTAIAEAESIPVLVEIIRTGS-PRNRENAAAILWYLCIGNIERLN-VAREVGADVALK 599
Query: 428 RLAENGTSRAKRKANGILERLNK 450
L ENGT RAKRKA +LE + +
Sbjct: 600 ELTENGTDRAKRKAASLLELIQQ 622
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 262 bits (670), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 161/390 (41%), Positives = 239/390 (61%), Gaps = 17/390 (4%)
Query: 69 GDDHLLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTV 128
GD + +P EFRCPIS E+M DPV+++ GQT++R CI++W+ G+ TCP T+Q +S +
Sbjct: 266 GDSRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSA 325
Query: 129 LIPNHLVREMISQWCKEHGIELPK----PIKDTDEDVVTDASRSHLNSLLEKM-SSSLSD 183
L PN+++R +ISQWC+ +G+E PK P K T + + R+++++LL K+ S +
Sbjct: 326 LTPNYVLRSLISQWCETNGMEPPKRSTQPNKPT--PACSSSERANIDALLSKLCSPDTEE 383
Query: 184 QKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSI 243
Q+ AA ELRLL KR R E+ AIPLLLS LS T E +T +LNLSI
Sbjct: 384 QRSAAAELRLLAKRNANNRICIAEA-GAIPLLLSLLSSSDLRTQ----EHAVTALLNLSI 438
Query: 244 HDENKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIGKLGAMTPLI 303
H++NK + + A+P ++ ++ G++E R NAAA LFSLS +D K+ IG +GA+ L+
Sbjct: 439 HEDNKASIISSG-AVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALV 497
Query: 304 DLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIME--NSLVDELLAILA 361
LL EG KD A+A+F+LCI NK RA+ AG V +I+ + +L+DE +AIL+
Sbjct: 498 VLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILS 557
Query: 362 MLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEE- 420
+LSSH + IG +P L+ +I T RN+EN AA++ ++C + +E
Sbjct: 558 ILSSHPEGKAAIGAAEPVPVLVEMIGSGT-PRNRENAAAVMLHLCSGEHHLVHLARAQEC 616
Query: 421 NANGTLSRLAENGTSRAKRKANGILERLNK 450
L LA NGT R KRKA +LER+++
Sbjct: 617 GIMVPLRELALNGTDRGKRKAVQLLERMSR 646
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 262 bits (670), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 161/390 (41%), Positives = 239/390 (61%), Gaps = 17/390 (4%)
Query: 69 GDDHLLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTV 128
GD + +P EFRCPIS E+M DPV+++ GQT++R CI++W+ G+ TCP T+Q +S +
Sbjct: 266 GDSRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSA 325
Query: 129 LIPNHLVREMISQWCKEHGIELPK----PIKDTDEDVVTDASRSHLNSLLEKM-SSSLSD 183
L PN+++R +ISQWC+ +G+E PK P K T + + R+++++LL K+ S +
Sbjct: 326 LTPNYVLRSLISQWCETNGMEPPKRSTQPNKPT--PACSSSERANIDALLSKLCSPDTEE 383
Query: 184 QKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSI 243
Q+ AA ELRLL KR R E+ AIPLLLS LS T E +T +LNLSI
Sbjct: 384 QRSAAAELRLLAKRNANNRICIAEA-GAIPLLLSLLSSSDLRTQ----EHAVTALLNLSI 438
Query: 244 HDENKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIGKLGAMTPLI 303
H++NK + + A+P ++ ++ G++E R NAAA LFSLS +D K+ IG +GA+ L+
Sbjct: 439 HEDNKASIISSG-AVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALV 497
Query: 304 DLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIME--NSLVDELLAILA 361
LL EG KD A+A+F+LCI NK RA+ AG V +I+ + +L+DE +AIL+
Sbjct: 498 VLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILS 557
Query: 362 MLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEE- 420
+LSSH + IG +P L+ +I T RN+EN AA++ ++C + +E
Sbjct: 558 ILSSHPEGKAAIGAAEPVPVLVEMIGSGT-PRNRENAAAVMLHLCSGEHHLVHLARAQEC 616
Query: 421 NANGTLSRLAENGTSRAKRKANGILERLNK 450
L LA NGT R KRKA +LER+++
Sbjct: 617 GIMVPLRELALNGTDRGKRKAVQLLERMSR 646
>sp|Q3E9F5|PUB48_ARATH U-box domain-containing protein 48 OS=Arabidopsis thaliana GN=PUB48
PE=2 SV=1
Length = 456
Score = 259 bits (662), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 170/463 (36%), Positives = 267/463 (57%), Gaps = 22/463 (4%)
Query: 1 MANPEVEETESCVRKAVELKKELQRLVKAILDE----DDYGGLQVTNEALRVLSCLKDLK 56
MA+ + TE+ + L++EL++++ L++ D ++ +EA+R+L+ +
Sbjct: 1 MADSTADATETNA-DTLTLRRELKKVLTENLNDGGVKDRVETVKSIDEAIRILN-----R 54
Query: 57 LKKPHSFKGGAAGDDHLLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRT 116
LK S K D + +P EF+C +S IM DPV++ +GQT+++ I WL+ + T
Sbjct: 55 LKIVESKKRKRESDSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNH-DLT 113
Query: 117 CPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEK 176
CP +QVL L PNHL+ E+I++WC + + P P K +D D VT+ + SLL++
Sbjct: 114 CPTAKQVLYRVCLTPNHLINELITRWCLANKYDRPAP-KPSDIDYVTELFTDGIESLLQR 172
Query: 177 MSS---SLSDQKEAAKELRLLTKRMPLFRALF-GESTDAIPLLLSPLS--PGRADTDPGL 230
+SS S++DQ EAAKEL L T++ R F E D+I LL+PLS D++P L
Sbjct: 173 ISSPSSSVADQTEAAKELALQTEKFVNVRDFFIKELPDSITRLLTPLSVLGDEVDSNPEL 232
Query: 231 LEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNK 290
E+++T + N+S ++NK ++AEN IPLL S++ G++ TRRNA L SLS +DSNK
Sbjct: 233 QENIVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNK 292
Query: 291 LIIGKLGAMTPLIDLLEEGHPL-AMKDVASAIFSLCI-LLENKRRAVHAGAVRVILRKIM 348
+IIG A+ LIDL+ E L A D A+ LC EN ++A+ G ++ I
Sbjct: 293 IIIGNSVALKALIDLIGELDDLSATHDALCAVIDLCCDERENWKKAISLGLAPAAIKNIK 352
Query: 349 ENSLVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFT 408
+ E LA LA++S H+ I+E+ LG I LL I+R+++C EN I+ N+
Sbjct: 353 ARRNLFESLAALALISPHERVIQEVANLGVIYDLLSILRKTSCMVTCENAVVIVGNMYAK 412
Query: 409 DRTRT--REIMEEENANGTLSRLAENGTSRAKRKANGILERLN 449
R R+ + + EEEN + T +++A G+ A KA GIL+ +N
Sbjct: 413 SRERSIKKILAEEENQHKTFTKIATQGSVVAVMKAQGILQCIN 455
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 257 bits (657), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/391 (41%), Positives = 240/391 (61%), Gaps = 21/391 (5%)
Query: 74 LGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNH 133
L +P +F CPIS E+M DP +++ GQT++R IQRW+D GN +CP+T+Q L + L PN+
Sbjct: 241 LTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNY 300
Query: 134 LVREMISQWCKEHGIELPKPI-----KDTD---EDVVTDASRSHLNSLLEKMSS-SLSDQ 184
++R +ISQWC +H IE P K++D D+ D S + +L+ K+SS S+ D+
Sbjct: 301 VLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDM--SAIRALVCKLSSQSIEDR 358
Query: 185 KEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIH 244
+ A E+R L+KR R L E+ AIP+L+ L+ +D D E+ +T ILNLSI+
Sbjct: 359 RTAVSEIRSLSKRSTDNRILIAEA-GAIPVLVKLLT---SDGDTETQENAVTCILNLSIY 414
Query: 245 DENKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIGKLGAMTPLID 304
+ NK L+ A+ ++ +R G++E R NAAA LFSLS D NK+IIG GA+ L+D
Sbjct: 415 EHNKELIMLAG-AVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVD 473
Query: 305 LLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENS---LVDELLAILA 361
LL+ G KD A+A+F+LCI NK RAV AG V+ +++ + ++S + DE L IL+
Sbjct: 474 LLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILS 533
Query: 362 MLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEEN 421
+L+S+Q A I AIP L+ +++ RN+EN AAIL +C D + I
Sbjct: 534 VLASNQVAKTAILRANAIPPLIDCLQKDQ-PRNRENAAAILLCLCKRDTEKLISI-GRLG 591
Query: 422 ANGTLSRLAENGTSRAKRKANGILERLNKAA 452
A L L+ +GT RAKRKAN +LE L K++
Sbjct: 592 AVVPLMELSRDGTERAKRKANSLLELLRKSS 622
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 235 bits (600), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 151/387 (39%), Positives = 236/387 (60%), Gaps = 20/387 (5%)
Query: 74 LGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNH 133
L LP+EF CPI+ EIM DPV++A GQT+++ IQ+W D G++TCP+TRQ L H L PN
Sbjct: 288 LILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNF 347
Query: 134 LVREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSS-LSDQKEAAKELR 192
++ +I QWC+++ ++P+ K+ D + + ++ L+E +SSS L +Q+ + K++R
Sbjct: 348 ALKNLIMQWCEKNNFKIPE--KEVSPD-SQNEQKDEVSLLVEALSSSQLEEQRRSVKQMR 404
Query: 193 LLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLVA 252
LL + P R L + AIPLL+ LS D G+ E+ +TT+LNLSI + NK+L++
Sbjct: 405 LLARENPENRVLIA-NAGAIPLLVQLLSY----PDSGIQENAVTTLLNLSIDEVNKKLIS 459
Query: 253 ENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIGKLGAMTPLIDLLEEGHPL 312
N AIP +I+ + G E R N+AAALFSLS LD NK+ IG + PL+DLL+ G
Sbjct: 460 -NEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQHGTLR 518
Query: 313 AMKDVASAIFSLCILLENKRRAVHAGAVR--VILRKIMENSLVDELLAILAMLSSHQDAI 370
KD +A+F+L + NK RA+ AG V+ + L K ++DE L+IL +L+SH +
Sbjct: 519 GKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGR 578
Query: 371 EEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIMEEENANGTLSRLA 430
+ IG+L I L+ IR+ T +NKE ++L + + + ++ G L
Sbjct: 579 QAIGQLSFIETLVEFIRQGT-PKNKECATSVLLELGSNNSSFILAALQ----FGVYEYLV 633
Query: 431 E---NGTSRAKRKANGILERLNKAALI 454
E +GT+RA+RKAN +++ ++K+ I
Sbjct: 634 EITTSGTNRAQRKANALIQLISKSEQI 660
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 185 bits (470), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 130/402 (32%), Positives = 207/402 (51%), Gaps = 21/402 (5%)
Query: 67 AAGDDHLLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSH 126
GDD +P EF CPIS ++M DPVV + GQT+DRP I +W++EG+ TCP + Q L+
Sbjct: 288 GGGDDTSFSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLAD 347
Query: 127 TVLIPNHLVREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSS------ 180
L+PN +R +ISQWC +G++ P + AS S ++ +++
Sbjct: 348 HRLVPNRALRSLISQWCGVYGLQYDSPESNEGMAECVAASCSSRAAMEANKATARILVRM 407
Query: 181 LSDQKE-----AAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLI 235
L D E AAKE+RLL K RA + AIPLL L D E+ +
Sbjct: 408 LEDGSENVKAVAAKEIRLLAKTGKQNRAFIAD-LGAIPLLCRLL----LSNDWMAQENAV 462
Query: 236 TTILNLSIHDENKRLVAENPLAIPLLIDSVRTG-TIETRRNAAAALFSLSAL-DSNKLII 293
T +LNLSI + NK + E + L++ ++ G T E + NAAA LFSLS + + KLI+
Sbjct: 463 TALLNLSIFEPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIM 522
Query: 294 GKLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLV 353
+ GA+ L +L +G KD A+F+L E+ R + + AV +++ + +++
Sbjct: 523 NEPGAVEELASMLTKGTSRGKKDAVMALFNLSTHPESSARMLESCAVVALIQSLRNDTVS 582
Query: 354 DELLAILAMLSSHQDAIEEIGEL-GAIPCLLRIIRESTCERNKENCAAILYNICFTDRTR 412
+E LA+L + +G I L+ ++R T + KEN + LY IC +
Sbjct: 583 EEAAGALALLMKQPSIVHLVGSSETVITSLVGLMRRGT-PKGKENAVSALYEICRRGGSA 641
Query: 413 -TREIMEEENANGTLSRLAENGTSRAKRKANGILERLNKAAL 453
+ + + N + + NGT RAK+KA+ I++ ++ +
Sbjct: 642 LVQRVAKIPGLNTVIQTITLNGTKRAKKKASLIVKMCQRSQM 683
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 134/415 (32%), Positives = 214/415 (51%), Gaps = 27/415 (6%)
Query: 58 KKPHSFKGGAAGD--DHLLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNR 115
KKP KG A + D + +P +F CPIS ++MTDPV+++ GQT+DR I RW++EG+
Sbjct: 287 KKPR--KGFVAQEIGDTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHC 344
Query: 116 TCPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPKPIKDTDED---------VVTDAS 166
TCP+T Q+L + ++PN ++ +I QWC GI D+ + +A+
Sbjct: 345 TCPKTGQMLMDSRIVPNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEAN 404
Query: 167 RSHLNSLLEKMS-SSLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRAD 225
++ ++ L++ ++ S + Q AA+E+RLL K RA E+ AIP L L+ A
Sbjct: 405 KATVSILIKYLADGSQAAQTVAAREIRLLAKTGKENRAYIAEA-GAIPHLCRLLTSENAI 463
Query: 226 TDPGLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTG-TIETRRNAAAALFSLS 284
E+ +T +LNLSI+++NK + E + ++ + +G T+E + NAAA LFSLS
Sbjct: 464 AQ----ENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLS 519
Query: 285 ALDSNKLIIGKLG-AMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVI 343
A+ K I + + L LL+ G P KD +A+++L +N R + G V +
Sbjct: 520 AVHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSL 579
Query: 344 LRKIMENSLVDELLAILAMLSSHQDAIEEIG-ELGAIPCLLRIIRESTCERNKENCAAIL 402
+ + + +E LA+L E IG E A+ L+ ++R T R KEN A L
Sbjct: 580 VGALKNEGVAEEAAGALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGT-PRGKENAVAAL 638
Query: 403 YNICFTDRTRTRE-IMEEENANGTLSRLAENGTSRAKRKANG---ILERLNKAAL 453
+C + E ++ G L L GT RA+RKA + +R AA+
Sbjct: 639 LELCRSGGAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLARVFQRRENAAM 693
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 199/398 (50%), Gaps = 45/398 (11%)
Query: 76 LPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLV 135
+P +FRCPI+ E+M DPVV+A GQT+DR I W+ G+ TCP+T QVL HT L+PN +
Sbjct: 274 IPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRAL 333
Query: 136 REMISQWCKEHGIEL---------PKPIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKE 186
+ +I WC++ I P P K+ E ++ ++ L+EK+ S++D
Sbjct: 334 KNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVE-----FTKMMVSFLIEKL--SVADSNG 386
Query: 187 AAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDE 246
ELR L K + RA E+ AIP L+ L A P L + +TTILNLSI ++
Sbjct: 387 VVFELRALAKSDTVARACIAEA-GAIPKLVRYL----ATECPSLQINAVTTILNLSILEQ 441
Query: 247 NKRLVAENPLAIPLLIDSVRTG-TIETRRNAAAALFSLSALDSNKLIIG-KLGAMTPLID 304
NK + E A+ +I+ +R+G T E + NAAA LFSL+ + + + +G K ++ L+D
Sbjct: 442 NKTRIMETDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVD 501
Query: 305 LLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDELLAILAMLS 364
L ++G + +D AI +L EN R V AG + + D +
Sbjct: 502 LAKQGPTSSKRDALVAILNLVAERENVGRFVEAGVM---------GAAGDAFQELPEEAV 552
Query: 365 SHQDAIEEIGELGAIPCLLRIIR------ESTCERNKENCAAILYNICFTDRTRTREIME 418
+ +A+ G L A+ +IR + +E+ AA L +C R E++
Sbjct: 553 AVVEAVVRRGGLMAVSAAFSLIRLLGEVMREGADTTRESAAATLVTMC---RKGGSELVA 609
Query: 419 EENANGTLSRLAEN----GTSRAKRKANGILERLNKAA 452
E A + R+ GT+R RKA ++ L + A
Sbjct: 610 EMAAIPGIERVIWEMIGAGTARGGRKAASLMRYLRRWA 647
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/281 (39%), Positives = 167/281 (59%), Gaps = 12/281 (4%)
Query: 168 SHLNSLLEKM-SSSLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADT 226
+ + L+E++ SSSL Q++A ELRLL K R + G S AI LL+ L T
Sbjct: 541 TQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNS-GAIVLLVELL----YST 595
Query: 227 DPGLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSAL 286
D E+ +T +LNLSI+D NK+ +A+ AI LI + G+ E + N+AA LFSLS +
Sbjct: 596 DSATQENAVTALLNLSINDNNKKAIADAG-AIEPLIHVLENGSSEAKENSAATLFSLSVI 654
Query: 287 DSNKLIIGKLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRK 346
+ NK+ IG+ GA+ PL+DLL G P KD A+A+F+L I ENK V +GAVR ++
Sbjct: 655 EENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLI-D 713
Query: 347 IMENS--LVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYN 404
+M+ + +VD+ +A+LA L++ + IG+ G IP L+ ++ E R KEN AA L
Sbjct: 714 LMDPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVV-ELGSARGKENAAAALLQ 772
Query: 405 ICFTDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGIL 445
+ T+ R ++ +E A L L+++GT RA+ KA +L
Sbjct: 773 LS-TNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALL 812
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 62/79 (78%)
Query: 79 EFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREM 138
+F CP+S E+MTDPV++++GQT+++ I+RW+D G + CP+TRQ L+HT LIPN+ V+ +
Sbjct: 233 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKAL 292
Query: 139 ISQWCKEHGIELPKPIKDT 157
I+ WC+ + ++LP P K T
Sbjct: 293 IANWCETNDVKLPDPNKST 311
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 156/274 (56%), Gaps = 12/274 (4%)
Query: 178 SSSLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITT 237
SSSL Q+EA +R+L + R + +AIP L+S L TD + D +T
Sbjct: 432 SSSLDTQREATARIRILARNSTDNRIVIAR-CEAIPSLVSLL----YSTDERIQADAVTC 486
Query: 238 ILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIE-TRRNAAAALFSLSALDSNKLIIGKL 296
+LNLSI+D NK L+AE+ +PL I ++TG +E + N+AA LFSLS ++ K IG+
Sbjct: 487 LLNLSINDNNKSLIAESGAIVPL-IHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEA 545
Query: 297 GAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENS--LVD 354
GA+ PL+DLL G KD A+A+F+L I ENK + + AGAVR ++ ++M+ + +V+
Sbjct: 546 GAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLV-ELMDPAFGMVE 604
Query: 355 ELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTR 414
+ + +LA L++ ++ IGE G IP L+ ++ E R KEN A L +C
Sbjct: 605 KAVVVLANLATVREGKIAIGEEGGIPVLVEVV-ELGSARGKENATAALLQLCTHSPKFCN 663
Query: 415 EIMEEENANGTLSRLAENGTSRAKRKANGILERL 448
++ E L L ++GT+R K KA +L+
Sbjct: 664 NVI-REGVIPPLVALTKSGTARGKEKAQNLLKYF 696
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 191/404 (47%), Gaps = 57/404 (14%)
Query: 37 GGLQVTNEALRVLSCLKDLKLKKPHSFKGGAAGDDHLLGLPYEFRCPISGEIMTDPVVLA 96
G + +T + LS +K +L+ P + +P +FRC +S E+MTDPV++A
Sbjct: 214 GLISLTTQMHEYLSDIKQAQLRCP-------------VRVPSDFRCSLSLELMTDPVIVA 260
Query: 97 NGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPKPIKD 156
+GQTF+R IQ+W+D G CP+TRQ LSHT L PN +VR ++ WC+ + + P P++
Sbjct: 261 SGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVRAFLASWCETNNVYPPDPLEL 320
Query: 157 TDEDVVTDASRSHLNSLLEKMSSSLSDQKEA----AKELRLLTKRMPLFRALFGE----- 207
S L+E + +S S+ + A+ELR + R + E
Sbjct: 321 IH-------SSEPFPLLVESVRASSSENGHSESLDAEELRQVFSRSASAPGIVSEVVCKT 373
Query: 208 ----STDAIPLLLSPLSPGRADTD-----PGLLEDLI-TTILNLSIHDENKRLVAENPLA 257
+ A L +P + + PG++ + T + SI E K+
Sbjct: 374 KRNNNAAADRSLTRSNTPWKFPEERHWRHPGIIPATVRETGSSSSIETEVKK-------- 425
Query: 258 IPLLIDSVRTGTIETRRNAAAALFSLSALDS-NKLIIGKLGAMTPLIDLLEEGHPLAMKD 316
LID +++ +++T+R A A + L+ + N+++I + A+ L+ LL D
Sbjct: 426 ---LIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQAD 482
Query: 317 VASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDEL----LAILAMLSSHQDAIEE 372
+ + +L I NK +GA+ V L +++ ++E A L LS ++ E
Sbjct: 483 AVTCLLNLSINDNNKSLIAESGAI-VPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTE 541
Query: 373 IGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREI 416
IGE GAI L+ ++ + K++ A L+N+ +T+ I
Sbjct: 542 IGEAGAIEPLVDLLGSGSLS-GKKDAATALFNLSIHHENKTKVI 584
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 202/390 (51%), Gaps = 24/390 (6%)
Query: 79 EFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREM 138
+ RCPIS EIM+DPVVL +G T+DR I +W GN TCP+T + L TVL+ N V+++
Sbjct: 281 DLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQV 340
Query: 139 ISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSSL--SDQKEAAK---ELRL 193
I + K++G+ + + K + + A+ E ++ L D++E K E+R+
Sbjct: 341 IQSYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEEMVKALVEIRI 400
Query: 194 LTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENK-RLVA 252
LTK +R+ E+ + L+ L R+D DP + E+ + I+NLS K R+V
Sbjct: 401 LTKTSTFYRSCLVEA-GVVESLMKIL---RSD-DPRIQENAMAGIMNLSKDIAGKTRIVG 455
Query: 253 ENPLAIPLLIDSVRTGT-IETRRNAAAALFSLSALDSNKLIIGKLGAMTP----LIDLLE 307
E+ + L+++ + G E+R+ AAAALF LS+L +IG++ P ++ +
Sbjct: 456 EDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCD 515
Query: 308 EGHPLAMKDVASAIFSLCI-LLENKRRAVHAGAVRVILRKIMENSLVDEL----LAILAM 362
G A ++ AI SL + +N R + AG V V+L + + D + +AILA
Sbjct: 516 YGDS-AKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILAK 574
Query: 363 LSSHQDAIEEIGELGAIPCLLRIIRESTCE-RNKENCAAILYNICFTDRTR-TREIMEEE 420
++ + D + + G + ++I+ S K++C A+L N+C + + +
Sbjct: 575 MAEYPDGMISVLRRGGLKLAVKILGSSEVSPATKQHCVALLLNLCHNGGSDVVGSLAKNP 634
Query: 421 NANGTLSRLAENGTSRAKRKANGILERLNK 450
+ G+L + NG +KA+ +++ +++
Sbjct: 635 SIMGSLYTASSNGELGGGKKASALIKMIHE 664
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 132 bits (331), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 178/316 (56%), Gaps = 16/316 (5%)
Query: 76 LPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHT-VLIPNHL 134
LP +FRCPIS EIM+DPV+L +G TFDR IQ+W+D GNRTCP T+ LS T LIPNH
Sbjct: 5 LPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHA 64
Query: 135 VREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKEAAKELRLL 194
+R +I + E +P T ++ S++ +++L+ + SS+ S + + +R L
Sbjct: 65 LRSLILNFAHVSLKESSRP--RTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVR-L 121
Query: 195 TKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENK-RLVAE 253
TKR R ES A+ L + + L E ++ +LNLS+ D+NK LVA+
Sbjct: 122 TKRDSSIRRKVTES-GAVRAALDCVD----SCNQVLQEKSLSLLLNLSLEDDNKVGLVAD 176
Query: 254 NPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIGKL-GAMTPLIDLLEEGHPL 312
I ++ +R G+ + + AA L SL+ ++ NK IG A++ L+ LL G+
Sbjct: 177 G--VIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDR 234
Query: 313 AMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDELLAILAMLSSHQDAIEE 372
K+ A+A+++LC +N++R V G+V +++ +S ++ + +L +L + EE
Sbjct: 235 ERKESATALYALCSFPDNRKRVVDCGSVPILVEA--ADSGLERAVEVLGLLVKCRGGREE 292
Query: 373 IGEL-GAIPCLLRIIR 387
+ ++ G + L+ ++R
Sbjct: 293 MSKVSGFVEVLVNVLR 308
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 199/403 (49%), Gaps = 32/403 (7%)
Query: 71 DHLLGLPYE-FRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVL 129
D + GL E CPIS EIMTDPVV+ G T+DR I +W GN TCP T ++L+ T L
Sbjct: 282 DLIRGLKVEDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTEL 341
Query: 130 IPNHLVREMISQWCKEHGIELP--KPIKDTDEDVVTD--ASRSHLNSLLEKMSSSLSDQK 185
+ N VR++I + CK +GI L + + +DVV + A++ + + ++S L +
Sbjct: 342 VDNVSVRQVIRKHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGG 401
Query: 186 E-----AAKELRLLTKRMPLFRALFGESTDAIPL--LLSPLSPGRADTDPGLLEDLITTI 238
E A +E+R+ TK R+ ++ PL LLS + D + E+ + I
Sbjct: 402 EEMIYRAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSV-------DIRIQENAMAGI 454
Query: 239 LNLSIHDENKRLVAENPLAIPLLIDSVRTGT-IETRRNAAAALFSLSALDSNKLIIGKLG 297
LNLS H K +A L I L++ + G ETR +A+ALF LS+++ +IG+
Sbjct: 455 LNLSKHVTGKSKIAGEGLKI--LVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENP 512
Query: 298 AMTPLIDLLEEGHPLAMKDVASAIFSLCILL---ENKRRAVHAGAVRVILRKI----MEN 350
P + + +G SA+ ++ LL +N R + AGAV ++L + +
Sbjct: 513 DAIPGLMNIVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEISG 572
Query: 351 SLVDELLAILAMLSSHQDAIEEIGELGAIPCLLRII--RESTCERNKENCAAILYNICFT 408
L + LA LA L+ + D + G + ++I+ E + K++C ++ N+C
Sbjct: 573 GLTADCLATLAKLAEYPDGTIGVIRRGGLKLAVKILSSSEDSPVAVKQHCVGLILNLCLN 632
Query: 409 -DRTRTREIMEEENANGTLSRLAENGTSRAKRKANGILERLNK 450
R +++ G+L + NG +KA+ ++ +++
Sbjct: 633 GGRDVVGVLVKNSLVMGSLYTVLSNGEYGGSKKASALIRMIHE 675
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 183/393 (46%), Gaps = 28/393 (7%)
Query: 76 LPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLV 135
+PY FRCPIS ++M+DPV ++ GQT+DR I W+ GN TCP TR LS LIPNH +
Sbjct: 14 IPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHTL 73
Query: 136 REMISQWC---KEHGIE-LPKPIKDTDEDVVTDASRSHLN--SLLEKMSSSLSDQKEAAK 189
R +I +WC + +G+E +P P + D V RS L+ S + S+ + A +
Sbjct: 74 RRLIQEWCVANRSNGVERIPTPKQPADPISV----RSLLSQASAITGTHVSVRSRAAAIR 129
Query: 190 ELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIH--DEN 247
LR L + R L +A +L+ L T + L + +H +
Sbjct: 130 RLRGLARDSEKNRVLIA-GHNAREILVRILFADIETTSLSSELVSESLALLVLLHMTETE 188
Query: 248 KRLVAENPLAIPLLIDSVRTGTIETRRNAAA----ALFSLSALDSNKLIIGKLGAMTPLI 303
VA +P + + + +IE R NAAA L ++D +I G ++
Sbjct: 189 CEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVL 248
Query: 304 DLLEEGHPL----AMKDVASAIFSLCILLENKRRAVHAGAVRVILRKI---MENSLVDEL 356
DLL+ +P+ A+K AIF+LC++ + + A+ AGA +++ ++ + +
Sbjct: 249 DLLK--NPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERG 306
Query: 357 LAILAMLSSHQDAIEEIGELG-AIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTRE 415
LA + +L + GE +P +++ I + +R E A L +C + E
Sbjct: 307 LATVELLCRLPEGCAAFGEHALTVPLMVKTILRVS-DRATEYAAGALLALCTAEERCRDE 365
Query: 416 IMEEENANGTLSRLAENGTSRAKRKANGILERL 448
L + + T RAKRKA +L+ L
Sbjct: 366 AAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLL 398
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 112 bits (279), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 176/363 (48%), Gaps = 33/363 (9%)
Query: 74 LGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNR-TCPQTRQVLSHTVLIPN 132
+ +PY FRCPIS E+M DPV + GQT+DR I+ W+ GN TCP TR LS LIPN
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPN 71
Query: 133 HLVREMISQWC---KEHGIE-LPKPIKDTDEDVVTDASRSHLN--SLLEKMSSSLSDQKE 186
H +R +I +WC + +G+E +P P + D V R+ L+ S + S+ +
Sbjct: 72 HTLRRLIQEWCVANRSNGVERIPTPKQPADPTSV----RALLSQASAITGTHVSVRSRAA 127
Query: 187 AAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDE 246
A + LR + R L + +A +L+ L T L+ + + ++ L I +
Sbjct: 128 ALRRLRGFARDSDKNRVLIA-AHNATEILIKIL--FSETTSSELVSESLALLVMLPITEP 184
Query: 247 NKRL-VAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIGKL----GAMTP 301
N+ + ++ +P + L + +IETR NAAA + +S + + G +
Sbjct: 185 NQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEG 244
Query: 302 LIDLLEEGHPL----AMKDVASAIFSLCILLENKRRAVHAGAVRVILRKI---MENSLVD 354
++DLL +P+ A+K +F+LC + + A+ AGA +++ ++ + +
Sbjct: 245 VLDLLR--NPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTE 302
Query: 355 ELLAILAMLSSHQDAIEEIGELG-AIPCLLR-IIRESTCERNKENCAAILYNICFTDRTR 412
LA + +L + GE +P L++ I+R S +R E A L +C T R
Sbjct: 303 RALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVS--DRATEYAAGALLALC-TAEER 359
Query: 413 TRE 415
RE
Sbjct: 360 WRE 362
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 150/284 (52%), Gaps = 11/284 (3%)
Query: 168 SHLNSLLEKMSSSLSDQKEAAK-ELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADT 226
SH L+E + S + K AA E+R LT R G AI LLS L T
Sbjct: 472 SHTIKLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGR-CGAITPLLSLLYSEEKLT 530
Query: 227 DPGLLEDLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSAL 286
E +T +LNLSI + NK ++ E AI L+ + TG + N+AA+LFSLS L
Sbjct: 531 Q----EHAVTALLNLSISELNKAMIVEVG-AIEPLVHVLNTGNDRAKENSAASLFSLSVL 585
Query: 287 DSNKLIIGKL-GAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILR 345
N+ IG+ A+ L++LL +G KD ASA+F+L I +NK R V A AV+ ++
Sbjct: 586 QVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVE 645
Query: 346 KIMEN-SLVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYN 404
+ + +VD+ +A+LA LS+ + + I G IP L+ + + +R KEN A++L
Sbjct: 646 LLDPDLEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGS-QRGKENAASVLLQ 704
Query: 405 ICFTDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGILERL 448
+C + + ++ +E A L L+++GT RAK KA +L
Sbjct: 705 LCL-NSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHF 747
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 87/138 (63%), Gaps = 10/138 (7%)
Query: 13 VRKAVELKKELQRLVKAILDEDDYGGLQVTNEALRVLSCLKDLKLKKPHSFKGGAAGDDH 72
+++++ ++KE R + +ED ++ T + + ++ C+++ LK F A G
Sbjct: 185 LKESITVEKERIRSQASKSEED----MEQTEQLIELVLCIREHMLKT--EFLEVAKG--- 235
Query: 73 LLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPN 132
+ +P FRCP+S E+M DPV++A+GQTFDR I++WLD G CP+TRQVL+H LIPN
Sbjct: 236 -ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPN 294
Query: 133 HLVREMISQWCKEHGIEL 150
+ V+ MI+ W + + I L
Sbjct: 295 YTVKAMIASWLEANRINL 312
>sp|Q0WUF6|PUB41_ARATH U-box domain-containing protein 41 OS=Arabidopsis thaliana GN=PUB41
PE=2 SV=1
Length = 559
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 6/213 (2%)
Query: 237 TILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIGKL 296
+++NLS+ +NK + + +PLLID +++GT E + + A ALFSL+ D NK++IG L
Sbjct: 299 SVVNLSLEKQNKVKIVRSGF-VPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGVL 357
Query: 297 GAMTPLIDLLEEGHP-LAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDE 355
GA+ PL+ L A +D A A++ L ++ N+ R V AGAV +L +
Sbjct: 358 GAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSR 417
Query: 356 LLAILAMLSSHQDAIEEIGELGAIPCLLRIIRE---STCERNKENCAAILYNICFTDRTR 412
+L +L L++ D + + A+ L+ +RE E +ENC A+L +C R
Sbjct: 418 ILLVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLC-QGNLR 476
Query: 413 TREIMEEENANGTLSRLAENGTSRAKRKANGIL 445
R + E A L + ENG R K KA+ IL
Sbjct: 477 FRGLASEAGAEEVLMEVEENGNERVKEKASKIL 509
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQ--RWLDEGNRTCPQTRQVLSHTVLIPNHL 134
P EF CPI+G +M+DPVV+++GQTF+R +Q R L TR LS +IPN
Sbjct: 32 PPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLS--TVIPNLA 89
Query: 135 VREMISQWCKEHGIELPKP 153
++ I WC ++ P+P
Sbjct: 90 MKSTIFSWCDRQKVDHPRP 108
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 59/75 (78%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P E RCPIS ++M DPV++A+GQT++R CI++W +G+ TCP+T Q LSH L PN+ V+
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 137 EMISQWCKEHGIELP 151
+IS WC+++G+++P
Sbjct: 340 ALISSWCEQNGVQVP 354
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 93/167 (55%), Gaps = 16/167 (9%)
Query: 5 EVEETESCVRKAVELKKELQRLVKA-ILDEDDYGGLQ--VTNEAL-------RVLSCLKD 54
E + ES V + L ++ +L ++ ILDE+D G NE R LS
Sbjct: 196 EDKRKESIVAYLLHLMRKCSKLFRSEILDENDSPGSYPCSPNEDHGSVHGFGRQLSRFGS 255
Query: 55 LKLKKPHSFKGGAAGDDHLLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGN 114
L K +S G + P E RCPIS ++M DPV++A+GQT++R CI++W +G+
Sbjct: 256 LNDKPMNSINSG-----QMPVPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGH 310
Query: 115 RTCPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPK-PIKDTDED 160
TCP+T+Q L H L PN+ V+ +I+ WC+++G ++P P + D D
Sbjct: 311 NTCPKTQQQLPHISLTPNNCVKGLIASWCEQNGTQIPSGPPESQDLD 357
>sp|Q9FL17|PUB40_ARATH U-box domain-containing protein 40 OS=Arabidopsis thaliana GN=PUB40
PE=2 SV=2
Length = 550
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 118/218 (54%), Gaps = 3/218 (1%)
Query: 233 DLITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLI 292
++ ++NLS+ NK + + + +P LID ++ G++E + ++A +FSL+ D NK
Sbjct: 289 NVTAVLVNLSLEKSNKVKIVRSGI-VPPLIDVLKCGSVEAQEHSAGVIFSLALEDENKTA 347
Query: 293 IGKLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSL 352
IG LG + PL+ L+ G L D A A++ L ++ N+ + V GAV+++L + +
Sbjct: 348 IGVLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSLGQM 407
Query: 353 VDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIR--ESTCERNKENCAAILYNICFTDR 410
+ +L IL ++S + + + G + C++ ++R E +E+C A+LY +
Sbjct: 408 IGRVLLILCNMASCPVSRPALLDSGGVECMVGVLRRDREVNESTRESCVAVLYGLSHDGG 467
Query: 411 TRTREIMEEENANGTLSRLAENGTSRAKRKANGILERL 448
R + + NA L ++ +G RAK+KA +LE L
Sbjct: 468 LRFKGLAMAANAVEELVKVERSGRERAKQKARRVLEVL 505
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 58/75 (77%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVR 136
P E RCPIS ++M DPV++A+GQT++R CI++W +G+ +CP+T+Q L H L PN+ V+
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 137 EMISQWCKEHGIELP 151
+I+ WC+++GI +P
Sbjct: 336 GLIASWCEQNGITVP 350
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 116/268 (43%), Gaps = 7/268 (2%)
Query: 181 LSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILN 240
L+ + + + +R+L K R L G + + L L D + E + N
Sbjct: 438 LAKKCKVVENVRILLKDNEEARILMG-ANGFVEAFLQFLESAVHDNNAAAQETGAMALFN 496
Query: 241 LSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIGKLGAMT 300
L++++ + + IPLL + +++ A A +LS L+ K +IG A++
Sbjct: 497 LAVNNNRNKELMLTSGVIPLLEKMISCS--QSQGPATALYLNLSCLEKAKPVIGSSQAVS 554
Query: 301 PLIDLLEEGHPLAMK-DVASAIFSLCILLENKRRAVHAGAVRV--ILRKIMENSLVDELL 357
++LL + K D A+++L N + + ++ +L + +++ L
Sbjct: 555 FFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHLWIEKSL 614
Query: 358 AILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTDRTRTREIM 417
A+L L+S ++ EE+ + L + ++ +E + L +C T +++
Sbjct: 615 AVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILC-TGSESCIQMV 673
Query: 418 EEENANGTLSRLAENGTSRAKRKANGIL 445
+E +L ++ NG+ R + K+ +L
Sbjct: 674 LQEGVIPSLVSISVNGSPRGRDKSQKLL 701
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 149/316 (47%), Gaps = 34/316 (10%)
Query: 71 DHLLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNR-TCPQTRQVLSHTVL 129
D + +P F CPIS +IM DPV+++ G T+DR I++WL G + +CP T+QV++ T L
Sbjct: 2 DQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDL 61
Query: 130 IPNHLVREMISQWCK---EHGIE---LPKP--IKDTDEDVVTDASRSHLNSL--LEKMSS 179
PNH +R +I WC +GIE PKP K E ++ ++S SHLN + L+++
Sbjct: 62 TPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQ 121
Query: 180 SLSDQKEAAKELRLLTKRMPLFRA-LFGESTDAIP-------------LLLSPLSPGRAD 225
+S+ + L +P F A + S D + S + R D
Sbjct: 122 IVSENTTNKRCLE--AAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFD 179
Query: 226 TDPGLLEDLITTILNLSIHDENKRLVAENPLAIPL---LIDSVRTGTIETRRNAAAALFS 282
+ L+++ ++ + +L + + + N L L ++ G E+R AA L
Sbjct: 180 SSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLKK 239
Query: 283 LSAL-DSNKLIIGKLGAMTPLIDLLEE--GHPLAMKDVASAIFSLCILLENKRRAVHAGA 339
L + D ++I+ + +I +L + H A + + C N+ +AV G
Sbjct: 240 LLEVADPMQIILLERELFGEVIQILHDQISHK-ATRSAMQILVITCPWGRNRHKAVEGGT 298
Query: 340 VRVILRKIMENSLVDE 355
+ +I+ +M+++ E
Sbjct: 299 ISMIIELLMDDTFSSE 314
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 138/303 (45%), Gaps = 37/303 (12%)
Query: 71 DHLLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNR-TCPQTRQVLSHTVL 129
D + +P F CPIS EIM DPV+++ G T+DR I++WL G + +CP T+Q ++ L
Sbjct: 7 DEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADL 66
Query: 130 IPNHLVREMISQWCK---EHGIE-LPKP----IKDTDEDVVTDASRSHLNSLLEKMSSSL 181
PNH +R +I WC +G+E +P P K E ++ D++ SH N
Sbjct: 67 TPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHEN---------- 116
Query: 182 SDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNL 241
Q + K LR + + + +P L+ + D++ G L D LNL
Sbjct: 117 --QVKCLKRLRQIVSENATNKRCLEAA--GVPEFLANIVSN--DSENGSLTD---EALNL 167
Query: 242 SIHDENKRLVAENPLA-------IPLLIDSVRTGTIETRRNAAAALFS-LSALDSNKLII 293
H E V +N L + L ++ G E+R A L + L D + +
Sbjct: 168 LYHLETSETVLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMT 227
Query: 294 GKLGAMTPLIDLLEEG-HPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSL 352
K T ++ +L++ A K + ++C N+ +AV AG + VI+ +M+ S
Sbjct: 228 LKPEVFTEVVQILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESF 287
Query: 353 VDE 355
E
Sbjct: 288 TSE 290
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 52/74 (70%)
Query: 74 LGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNH 133
+ +P EF+CPIS ++M DPV+++ G T+DR I+ W++ GN+TCP T VL+ IPNH
Sbjct: 29 ITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNH 88
Query: 134 LVREMISQWCKEHG 147
+R+MI WC E G
Sbjct: 89 TIRKMIQGWCVEKG 102
>sp|Q6K762|PUB73_ORYSJ U-box domain-containing protein 73 OS=Oryza sativa subsp. japonica
GN=PUB73 PE=2 SV=1
Length = 586
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 25/270 (9%)
Query: 76 LPYEF--RCPI--------SGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTR---- 121
LPYEF R PI E+M DPV+L +G + D Q + + R P T
Sbjct: 173 LPYEFATRWPIPIAHDGTLQAEVMRDPVILPSGYSVD----QTYQNNQKRQNPWTNTSTF 228
Query: 122 --QVLSHTVLIPNHLVREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSS 179
L +++ +PNHL+R+MIS WC +H P DT + + + +L+ S
Sbjct: 229 TDHSLPYSLSVPNHLLRDMISAWCLDHSDLSPSTTSDTPSTPLEPSEEEQIQRILKLFSG 288
Query: 180 SLSDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTIL 239
+ + Q+EA K ++LLTK + + D IP+L++ ++ L E+ +T IL
Sbjct: 289 NSASQREALKLIQLLTKTTKGVQPCLAKYADIIPVLINLRRKYKSSWTQDLEEERLTIIL 348
Query: 240 NLSIHDENKRLVA-ENPLAIPLLIDSVRTGTIETRRNAAAALFS----LSALDSNKLIIG 294
NL++H +N+ ++A +N LA + + G R ++ A + S LS D + +
Sbjct: 349 NLTMHRQNREILAGQNELAGAIKKIVKKAGNRGKRTSSLAKVASIVAVLSEFDMFRKRML 408
Query: 295 KLGAMTPLIDLLEEGHPLAMKDVASAIFSL 324
G M L +L+ + + A+AI +L
Sbjct: 409 DAGGMKMLRGMLKIKDTEVITEAATAILAL 438
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 74 LGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNH 133
+ +P +F+CPIS E+M DPV++A+G T+DR I++W + G +TCP T VL+ IPNH
Sbjct: 31 ITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNH 90
Query: 134 LVREMISQWCKEH---GIE-LPKP 153
+R MI WC GIE +P P
Sbjct: 91 TIRRMIQGWCGSSLGGGIERIPTP 114
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 70 DDHLLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVL 129
DD + +P FRCPIS ++M PV L G T+DR IQRWLD GN TCP T Q+L +
Sbjct: 4 DDLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDF 63
Query: 130 IPNHLVREMISQW--------CKEHGIELPKPIKDTDEDVV 162
IPN ++ +I W C E EL P +D D +
Sbjct: 64 IPNRTLQRLIEIWSDSVRRRTCVESA-ELAAPTRDEIADAI 103
>sp|Q9STT1|PUB39_ARATH U-box domain-containing protein 39 OS=Arabidopsis thaliana GN=PUB39
PE=2 SV=1
Length = 509
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 116/219 (52%), Gaps = 9/219 (4%)
Query: 237 TILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIGKL 296
+I+NLS+ NK + + +PLLID +++G+ E + + ALFSL+ + NK++IG L
Sbjct: 248 SIVNLSLEKPNKLKIVRSGF-VPLLIDVLKSGSTEAQEHVIGALFSLAVEEENKMVIGVL 306
Query: 297 GAMTPLIDLLEEGHP-LAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLVDE 355
GA+ PL+ L A +D A A++ L ++ N+ R V AGAV ++L I
Sbjct: 307 GAVEPLLHALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIRSGESASR 366
Query: 356 LLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERN----KENCAAILYNICFTDRT 411
+L +L L++ + + + A+ L+ +RES + +ENC L + +
Sbjct: 367 ILLLLCNLAACSEGKGAMLDGNAVSILVGKLRESGGAESDAAARENCVGALLTLSVGN-M 425
Query: 412 RTREIMEEENANGTLSRL--AENGTSRAKRKANGILERL 448
R R + E A L+ + +E+G+ R K KA+ IL+ L
Sbjct: 426 RFRGLASEAGAEEILTEIVESESGSGRLKEKASKILQTL 464
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQ--RWLDEGNRTCPQTRQVLSHTVLIPNHL 134
P EF CPI+G +M+DPVV+A+GQTF+R +Q R L + T+ LS +IPN
Sbjct: 11 PTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQPDLS--TVIPNLA 68
Query: 135 VREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSL 173
++ I WC + +E P+P D V R+ ++SL
Sbjct: 69 MKSTILSWCDRNKMEHPRP---PDYAYVEGVVRTRMDSL 104
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 56/84 (66%)
Query: 72 HLLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIP 131
H LP +F+C +S +M DPV++++G TF+R IQ+W DEGN +CP +++ L L P
Sbjct: 215 HNGTLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKP 274
Query: 132 NHLVREMISQWCKEHGIELPKPIK 155
N ++ IS+WC ++G+++ P +
Sbjct: 275 NVELKSQISEWCAKNGLDVQDPAR 298
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 68 AGDDHLLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHT 127
+ D ++ +P F+CPIS ++M PV L+ G T+DR IQRWLD+GN TCP T Q+L +
Sbjct: 3 SDDLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNK 62
Query: 128 VLIPNHLVREMISQW 142
+PN + +I W
Sbjct: 63 EFVPNLTLHRLIDHW 77
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 189/421 (44%), Gaps = 47/421 (11%)
Query: 66 GAAGDDHLLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLS 125
G + + +P F+CPIS ++M PV L G T+DR IQRWLD GN TCP T Q+L
Sbjct: 2 GRDETETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLK 61
Query: 126 HTVLIPNHLVREMISQWC----KEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSSL 181
+PN ++ +I+ W + H + P + +V T + +N LLE++ S
Sbjct: 62 TKDFVPNLTLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPT---KEEVNVLLERLMSL- 117
Query: 182 SDQKEAAKELRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNL 241
E ++ K R + + +P+L+ + + + ++ I + ++
Sbjct: 118 ----ENLMKIVRFVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMA--IRILDSI 171
Query: 242 SIHDE---NKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLII----G 294
+ E N L + + ++ +++ G +E++ + L +S +KL+I G
Sbjct: 172 KVDRERLSNLMLANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDG 231
Query: 295 KLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVR----VILRKIMEN 350
L M I + E P ++ S + ++ + + + A A+ ++L + + N
Sbjct: 232 VLTEMMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTN 291
Query: 351 SLVDEL-LAILAMLSSHQDAIEEI-----GEL--GAIPCLLRIIRESTCERNKENCAAIL 402
V E L +L LSS ++ EI G G + LL++ +T E+ IL
Sbjct: 292 VAVTEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTAT-----EHAVTIL 346
Query: 403 YNICFTDRTRTREIMEE--ENANGT---LSRLAENGTSRAKRKANGILE--RLNKAALIV 455
+ +C+ R + +EE E +NG L + N ++ ++ A +++ + N +AL
Sbjct: 347 WCLCYV--FREDKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLKFNSSALAA 404
Query: 456 H 456
+
Sbjct: 405 Y 405
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVL-IPNHLV 135
P +F CPI+G+I +DPV L GQT++R IQ WL GN TCP TRQ LS +L N+++
Sbjct: 514 PKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTGNTTCPITRQALSANILPKTNYVL 573
Query: 136 REMISQWCKEHGIELPKPIKDTD 158
+ +I W KE EL + +++
Sbjct: 574 KRLIVSW-KEQNPELAQEFSNSN 595
>sp|Q9FJP6|PUB38_ARATH U-box domain-containing protein 38 OS=Arabidopsis thaliana GN=PUB38
PE=1 SV=1
Length = 556
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 108/222 (48%), Gaps = 12/222 (5%)
Query: 235 ITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSALDSNKLIIG 294
+ +++NLS+ +NK + +P+LID +++G+ E + +AA +FSLS D NK+ IG
Sbjct: 287 LASLVNLSLDKKNKLTIVRLGF-VPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMPIG 345
Query: 295 KLGAMTPLIDLLEEGHPLAMK-DVASAIFSLCILLENKRRAVHAGAVRVILRKIMENSLV 353
LGA+ PL+ L + D A A++ L + N+ + V GAV + +
Sbjct: 346 VLGALQPLLHALRAAESDRTRHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVRSGESA 405
Query: 354 DELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCER---------NKENCAAILYN 404
L ++ L+ + + + A+ L+ +RE E +ENC A L+
Sbjct: 406 SRALLVICNLACCSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARENCVAALFA 465
Query: 405 ICFTDRTRTREIMEEENANGTLSRLAENGTSRAKRKANGILE 446
+ + R + + +E A L + E GT RA+ KA IL+
Sbjct: 466 LSH-ESLRFKGLAKEARAVEVLKEVEERGTERAREKAKKILQ 506
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 153/365 (41%), Gaps = 40/365 (10%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQ--RWLDEGNRTCPQTRQVLSHTVLIPNHL 134
P EF CPIS +M+DPVV+++GQTF+R C+Q R L+ + + + +IPN
Sbjct: 34 PVEFLCPISKSVMSDPVVVSSGQTFERVCVQVCRDLNFIPKLNDDEESLPDFSNIIPNLN 93
Query: 135 VREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKEAAKE-LRL 193
++ I WC G+ P+P + + + L ++M + + + +E LR
Sbjct: 94 MKSTIDTWCDTVGVSRPQPPDYSTVERI----------LRQQMPPPDVEIRVSEQELLRA 143
Query: 194 LTKRMPLF----------RALFGEST----DAIPLLLSPLSPGRADTDPGLLEDL----- 234
+ R P+ R F ST +++ + SP +P T P
Sbjct: 144 VAHRAPMIIHHADSELMGRRDFNNSTTSSDESVIVAHSPFTPLPLTTRPACFSPSPSSSS 203
Query: 235 --ITTILNLSIHDENKRLVAENPLAIPLLIDSVRTGTIETRRNAAAALFSLSAL-DSNKL 291
I T+ + + + E I + +++ I + + ++ D ++
Sbjct: 204 SEIETLTHHTFFSNSTSTATEEDEVI---YNKLKSSEIFDQEQGLIMMRKMTRTNDEARV 260
Query: 292 IIGKLGAMTPLIDLLEEGHPLAMKDVASAIFSLCILLENKRRAVHAGAVRVILRKIMENS 351
+ ++ L +++ + L + +++ +L + +NK V G V +++ + S
Sbjct: 261 SLCSPRILSLLKNMIVSRYSLVQTNALASLVNLSLDKKNKLTIVRLGFVPILIDVLKSGS 320
Query: 352 --LVDELLAILAMLSSHQDAIEEIGELGAIPCLLRIIRESTCERNKENCAAILYNICFTD 409
+ + LS D IG LGA+ LL +R + +R + + A LY++
Sbjct: 321 REAQEHAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRAAESDRTRHDSALALYHLTLNQ 380
Query: 410 RTRTR 414
R++
Sbjct: 381 TNRSK 385
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVL-IPNHLV 135
P +F CPI+G+I DPV L GQT++R IQ WL GN TCP TRQ LS ++L N+++
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSASILPKTNYVL 571
Query: 136 REMISQWCKEHGIELPKPIKDTD 158
+ +I+ W KE EL + + +
Sbjct: 572 KRLITSW-KEQNPELAQEFSNVN 593
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 77 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVL-IPNHLV 135
P +F CPI+G+I DPV L GQT++R IQ WL GN TCP TRQ LS ++L N+++
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSASILPKTNYVL 571
Query: 136 REMISQWCKEHGIELPKPIKDTD 158
+ +I+ W KE EL + + +
Sbjct: 572 KRLITSW-KEQNPELAQEFSNVN 593
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 31/232 (13%)
Query: 76 LPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLV 135
+P F CPIS E M DPV L GQT++R I +W + G+ TCP T Q L ++ PN +
Sbjct: 60 IPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTL 119
Query: 136 REMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSS-----SLSDQKEAAKE 190
++I W + + + K +D + + L K +LS+ K+
Sbjct: 120 HQLIYTWFSQKYVLMKKRSEDVQGRAI------EILGTLRKAKGKAKVHALSELKQVVMA 173
Query: 191 LRLLTKRMPLFRALFGESTDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRL 250
+ K + +F I LLSP T + + I ++NL + ++K
Sbjct: 174 HAIAKKTVVDEGGVF-----VISSLLSPF------TSHAVGSEAIAILVNLELDSDSKAG 222
Query: 251 VAENPLAIPLLIDSVRTGTIETRRNAAAAL--------FSLSALDSNKLIIG 294
+ + P + L++D + G+IET+ N A + F + S+ L++G
Sbjct: 223 LMQ-PARVSLMVDMLNDGSIETKINCARLIGRLVEEKGFRAELVSSHSLLVG 273
>sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33
PE=2 SV=2
Length = 834
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 70 DDHLLGLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVL 129
++H + PY F CPI E+M DP V A+G T++ I+ WLD + T P T LSHT L
Sbjct: 758 NEHRIAPPY-FICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSL 816
Query: 130 IPNHLVREMISQWCKEH 146
I NH +R I +W + H
Sbjct: 817 IANHALRSAIQEWLQHH 833
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 59 KPHSFKGGAAGDDHLLGLP-YEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTC 117
+ H G + +D + P F CPIS E+M +P V A+G T++ ++ WLD G+ T
Sbjct: 479 RRHGTPSGFSDEDSVTRQPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETS 538
Query: 118 PQTRQVLSHTVLIPNHLVREMISQW 142
P T L+H L+PNH +R I +W
Sbjct: 539 PMTNLKLAHNNLVPNHALRSAIQEW 563
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 25/229 (10%)
Query: 76 LPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLV 135
+P F CPIS E M DPV L GQT++R I +W + G+ TCP T Q L + PN +
Sbjct: 64 IPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTL 123
Query: 136 REMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKEAAKELRLLT 195
+I W + + + K +D V + L +L + + + A EL+ +
Sbjct: 124 HHLIYTWFSQKYVLMKKRSED-----VQGRAIEILGTLKKAKGQA---RVHALSELKQIV 175
Query: 196 KRMPLFRALFGE--STDAIPLLLSPLSPGRADTDPGLLEDLITTILNLSIHDENKRLVAE 253
+ R E I LL P T + +++ +++L + ++K + +
Sbjct: 176 IAHLMARKTVVEEGGVSVISSLLGPF------TSHAVGSEVVAILVSLDLDSDSKSGLMQ 229
Query: 254 NPLAIPLLIDSVRTGTIETRRNAAAAL--------FSLSALDSNKLIIG 294
P + L++D + G+ ET+ N A + F + S+ L++G
Sbjct: 230 -PAKVSLIVDMLNDGSNETKINCARLIRGLVEEKGFRAELVSSHSLLVG 277
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 76 LPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLS-HTVLIPNHL 134
+P F CPIS EIM DPV +G T+DR I +WL E +CP T+Q L + L PNH+
Sbjct: 10 IPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWL-EKVPSCPVTKQPLPLDSDLTPNHM 68
Query: 135 VREMISQWCKEH 146
+R +I WC E+
Sbjct: 69 LRRLIQHWCVEN 80
>sp|Q9LQ92|PUB54_ARATH U-box domain-containing protein 54 OS=Arabidopsis thaliana GN=PUB54
PE=2 SV=1
Length = 308
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 79 EFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREM 138
+F+CPIS EIM DP V A+G T++ ++WL G RT P+T + L + L+PNH +R +
Sbjct: 236 DFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRII 295
Query: 139 ISQW 142
I W
Sbjct: 296 IKDW 299
>sp|A0AUS0|WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio
GN=wdsub1 PE=2 SV=1
Length = 487
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 75 GLPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHL 134
G P EF CPI+ EIM DPV+ A+G +++R I+ W+ NRT P T L T+L PN
Sbjct: 416 GTPDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTPNRT 475
Query: 135 VREMISQW 142
++ I +W
Sbjct: 476 LKMAIFRW 483
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 166,173,387
Number of Sequences: 539616
Number of extensions: 7026890
Number of successful extensions: 21668
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 146
Number of HSP's that attempted gapping in prelim test: 21117
Number of HSP's gapped (non-prelim): 388
length of query: 458
length of database: 191,569,459
effective HSP length: 121
effective length of query: 337
effective length of database: 126,275,923
effective search space: 42554986051
effective search space used: 42554986051
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)