Query 012678
Match_columns 458
No_of_seqs 139 out of 1228
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 14:07:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012678.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012678hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1.3E-71 4.5E-76 538.4 33.9 437 9-457 8-454 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 8.6E-66 2.9E-70 508.6 35.9 442 11-458 5-480 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 9.4E-63 3.2E-67 485.1 43.0 440 11-457 3-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 6.1E-63 2.1E-67 483.3 33.6 433 13-457 6-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 3.5E-60 1.2E-64 465.1 36.8 426 13-456 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 7.9E-46 2.7E-50 362.1 31.2 398 11-456 9-421 (424)
7 4amg_A Snogd; transferase, pol 100.0 2E-46 7E-51 363.7 25.9 360 11-453 19-397 (400)
8 1iir_A Glycosyltransferase GTF 100.0 9.6E-44 3.3E-48 346.0 25.3 376 15-454 1-398 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 1.8E-42 6E-47 337.3 21.2 370 15-451 1-395 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 2.3E-41 7.9E-46 329.7 28.4 379 12-457 18-414 (415)
11 2yjn_A ERYCIII, glycosyltransf 100.0 1.2E-40 4.3E-45 326.7 27.9 374 11-456 17-435 (441)
12 3ia7_A CALG4; glycosysltransfe 100.0 2.7E-40 9.1E-45 320.9 29.2 375 15-456 5-398 (402)
13 3h4t_A Glycosyltransferase GTF 100.0 1.2E-41 4E-46 329.8 16.6 368 15-456 1-382 (404)
14 2iyf_A OLED, oleandomycin glyc 100.0 4E-39 1.4E-43 315.4 28.2 375 14-455 7-398 (430)
15 2p6p_A Glycosyl transferase; X 100.0 1.5E-39 5.1E-44 313.5 24.6 353 15-456 1-379 (384)
16 3oti_A CALG3; calicheamicin, T 100.0 7.4E-38 2.5E-42 303.1 22.7 359 6-455 12-396 (398)
17 4fzr_A SSFS6; structural genom 100.0 2.5E-38 8.4E-43 306.5 18.5 359 7-451 8-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 5.3E-36 1.8E-40 289.5 20.6 355 14-455 1-387 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 9.8E-34 3.3E-38 275.6 26.2 369 5-456 11-408 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 6.3E-29 2.2E-33 236.5 23.1 305 15-417 3-324 (365)
21 2o6l_A UDP-glucuronosyltransfe 100.0 4.9E-28 1.7E-32 205.0 14.0 159 259-435 9-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 3.5E-21 1.2E-25 183.6 22.6 337 14-457 6-356 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.6 3.3E-16 1.1E-20 135.3 9.2 132 268-414 25-196 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.6 1.2E-14 3.9E-19 131.2 15.1 116 270-400 156-274 (282)
25 3fro_A GLGA glycogen synthase; 99.5 1.1E-11 3.9E-16 120.6 24.9 383 13-458 1-430 (439)
26 3okp_A GDP-mannose-dependent a 99.4 2.6E-12 8.8E-17 123.4 17.7 344 12-458 2-379 (394)
27 3c48_A Predicted glycosyltrans 99.4 3E-11 1E-15 117.7 24.2 366 11-457 17-424 (438)
28 2gek_A Phosphatidylinositol ma 99.4 6E-11 2E-15 114.3 23.2 338 11-457 17-382 (406)
29 3ot5_A UDP-N-acetylglucosamine 99.3 1.9E-11 6.6E-16 117.2 14.3 160 270-455 223-392 (403)
30 1vgv_A UDP-N-acetylglucosamine 99.3 9.1E-12 3.1E-16 119.2 11.7 162 270-457 204-375 (384)
31 2iuy_A Avigt4, glycosyltransfe 99.3 1.1E-10 3.9E-15 109.7 18.5 125 274-416 164-307 (342)
32 2jjm_A Glycosyl transferase, g 99.3 1.8E-09 6E-14 103.6 26.3 347 14-457 15-384 (394)
33 2r60_A Glycosyl transferase, g 99.3 1.5E-09 5E-14 107.7 26.3 168 272-457 262-458 (499)
34 1v4v_A UDP-N-acetylglucosamine 99.3 4.4E-11 1.5E-15 114.1 14.5 134 270-426 197-340 (376)
35 2iw1_A Lipopolysaccharide core 99.3 2.3E-09 7.9E-14 101.9 25.8 132 270-417 194-337 (374)
36 3beo_A UDP-N-acetylglucosamine 99.2 1.2E-10 4.1E-15 110.9 16.1 161 270-456 204-374 (375)
37 3dzc_A UDP-N-acetylglucosamine 99.2 3.5E-11 1.2E-15 115.3 10.7 158 270-457 229-396 (396)
38 2x6q_A Trehalose-synthase TRET 99.1 3.3E-09 1.1E-13 102.5 17.5 111 331-458 293-414 (416)
39 3s28_A Sucrose synthase 1; gly 98.9 2.3E-08 8E-13 103.0 18.1 168 271-456 571-767 (816)
40 3oy2_A Glycosyltransferase B73 98.8 2.7E-07 9.1E-12 88.9 19.2 166 271-457 183-389 (413)
41 4hwg_A UDP-N-acetylglucosamine 98.8 1.1E-08 3.9E-13 97.0 8.5 128 271-418 203-343 (385)
42 2hy7_A Glucuronosyltransferase 98.6 1.1E-06 3.7E-11 84.4 17.3 73 331-417 265-352 (406)
43 1rzu_A Glycogen synthase 1; gl 98.6 1.8E-06 6.1E-11 85.0 19.1 157 273-457 292-474 (485)
44 2vsy_A XCC0866; transferase, g 98.6 7.9E-06 2.7E-10 82.1 24.1 116 331-457 434-558 (568)
45 2qzs_A Glycogen synthase; glyc 98.6 2E-06 6.8E-11 84.6 18.8 160 271-457 291-475 (485)
46 2f9f_A First mannosyl transfer 98.5 1.5E-07 5.1E-12 79.1 7.5 128 273-417 24-162 (177)
47 2xci_A KDO-transferase, 3-deox 98.4 2.1E-05 7.2E-10 74.4 18.8 96 333-435 262-364 (374)
48 4gyw_A UDP-N-acetylglucosamine 97.9 0.00032 1.1E-08 72.1 17.5 136 269-417 520-668 (723)
49 3qhp_A Type 1 capsular polysac 97.9 3.3E-05 1.1E-09 63.7 8.2 140 272-431 2-155 (166)
50 2bfw_A GLGA glycogen synthase; 97.8 0.00024 8.2E-09 60.4 11.8 77 332-417 96-181 (200)
51 3tov_A Glycosyl transferase fa 97.7 0.00049 1.7E-08 64.2 14.2 106 12-139 6-115 (349)
52 1psw_A ADP-heptose LPS heptosy 97.7 0.001 3.4E-08 62.1 16.2 103 15-139 1-106 (348)
53 3q3e_A HMW1C-like glycosyltran 97.5 0.00098 3.3E-08 65.8 13.2 138 271-417 440-588 (631)
54 3rhz_A GTF3, nucleotide sugar 97.5 0.0003 1E-08 65.2 8.8 109 332-453 215-335 (339)
55 2gt1_A Lipopolysaccharide hept 96.2 0.0055 1.9E-07 56.5 6.0 131 270-417 177-322 (326)
56 3vue_A GBSS-I, granule-bound s 96.0 0.029 9.9E-07 55.4 10.0 166 271-457 326-510 (536)
57 2x0d_A WSAF; GT4 family, trans 95.8 0.0037 1.3E-07 59.7 2.6 83 332-426 296-385 (413)
58 3ty2_A 5'-nucleotidase SURE; s 95.4 0.067 2.3E-06 46.5 8.7 48 7-56 4-51 (261)
59 3vue_A GBSS-I, granule-bound s 93.7 0.039 1.3E-06 54.5 3.8 43 8-52 3-53 (536)
60 2phj_A 5'-nucleotidase SURE; S 92.7 1.3 4.6E-05 38.2 11.3 110 15-143 2-128 (251)
61 1j9j_A Stationary phase surviV 92.1 2.4 8.1E-05 36.7 12.2 111 15-143 1-129 (247)
62 2e6c_A 5'-nucleotidase SURE; S 91.9 2.9 0.0001 36.0 12.5 109 15-143 1-130 (244)
63 1l5x_A SurviVal protein E; str 91.6 2 6.7E-05 37.9 11.2 110 15-143 1-128 (280)
64 1uqt_A Alpha, alpha-trehalose- 89.6 1.6 5.6E-05 42.1 10.0 105 336-457 337-453 (482)
65 2x0d_A WSAF; GT4 family, trans 89.5 0.19 6.4E-06 47.8 3.2 43 9-51 41-88 (413)
66 2wqk_A 5'-nucleotidase SURE; S 89.3 2 6.9E-05 37.3 9.3 109 16-143 3-128 (251)
67 2v4n_A Multifunctional protein 88.7 5.1 0.00018 34.7 11.3 41 14-56 1-41 (254)
68 3nb0_A Glycogen [starch] synth 87.0 2.5 8.6E-05 42.3 9.3 40 337-378 499-551 (725)
69 3t5t_A Putative glycosyltransf 86.2 5 0.00017 38.7 10.8 109 332-456 353-471 (496)
70 1g5t_A COB(I)alamin adenosyltr 85.8 2.2 7.7E-05 35.4 7.1 99 13-124 27-131 (196)
71 1xmp_A PURE, phosphoribosylami 83.3 16 0.00054 29.2 11.3 140 271-438 11-163 (170)
72 4dzz_A Plasmid partitioning pr 79.3 8.1 0.00028 31.9 8.5 37 15-51 1-39 (206)
73 3zqu_A Probable aromatic acid 77.4 3.7 0.00013 34.4 5.5 38 13-51 3-40 (209)
74 1ccw_A Protein (glutamate muta 76.9 3.4 0.00012 32.0 4.9 38 13-50 2-39 (137)
75 1sbz_A Probable aromatic acid 74.4 4.1 0.00014 33.8 5.0 36 15-51 1-37 (197)
76 3mc3_A DSRE/DSRF-like family p 73.0 5.4 0.00019 30.7 5.1 38 14-51 15-55 (134)
77 1u11_A PURE (N5-carboxyaminoim 70.8 40 0.0014 27.2 9.8 140 271-439 21-174 (182)
78 2iz6_A Molybdenum cofactor car 70.6 30 0.001 28.0 9.2 77 335-417 93-174 (176)
79 3lqk_A Dipicolinate synthase s 70.0 7.1 0.00024 32.5 5.5 41 13-54 6-47 (201)
80 2yxb_A Coenzyme B12-dependent 69.8 4.2 0.00014 32.6 3.9 40 12-51 16-55 (161)
81 1y80_A Predicted cobalamin bin 69.4 5.5 0.00019 33.4 4.8 40 12-51 86-125 (210)
82 2i2x_B MTAC, methyltransferase 69.2 7.4 0.00025 33.9 5.7 40 12-51 121-160 (258)
83 3qjg_A Epidermin biosynthesis 68.4 6 0.0002 32.1 4.5 39 15-54 6-44 (175)
84 3auf_A Glycinamide ribonucleot 68.4 18 0.00061 30.8 7.7 106 12-143 20-132 (229)
85 3lp6_A Phosphoribosylaminoimid 68.3 44 0.0015 26.7 9.7 139 270-437 6-156 (174)
86 2lnd_A De novo designed protei 65.2 8.4 0.00029 26.0 3.9 50 367-416 49-100 (112)
87 1o4v_A Phosphoribosylaminoimid 65.0 54 0.0018 26.5 13.1 139 271-438 13-163 (183)
88 4b4o_A Epimerase family protei 63.6 6.3 0.00022 35.0 4.3 32 15-50 1-32 (298)
89 1mvl_A PPC decarboxylase athal 62.4 9.2 0.00031 32.0 4.7 41 13-55 18-58 (209)
90 3ezx_A MMCP 1, monomethylamine 62.2 9.6 0.00033 32.1 4.9 41 11-51 89-129 (215)
91 1kjn_A MTH0777; hypotethical p 61.7 13 0.00045 28.9 4.9 40 12-51 4-45 (157)
92 3l4e_A Uncharacterized peptida 61.5 17 0.00059 30.3 6.3 45 262-306 19-63 (206)
93 3vot_A L-amino acid ligase, BL 61.5 69 0.0024 29.9 11.4 95 13-137 4-101 (425)
94 2q5c_A NTRC family transcripti 60.6 20 0.00068 29.6 6.5 43 95-145 129-171 (196)
95 2vo1_A CTP synthase 1; pyrimid 60.5 9.2 0.00031 33.2 4.3 43 9-51 17-62 (295)
96 2gk4_A Conserved hypothetical 59.8 11 0.00039 32.0 4.9 26 25-52 28-53 (232)
97 2r8r_A Sensor protein; KDPD, P 59.6 12 0.00042 31.7 5.0 39 13-51 5-43 (228)
98 3s2u_A UDP-N-acetylglucosamine 59.1 19 0.00064 33.1 6.8 38 271-310 3-40 (365)
99 3mcu_A Dipicolinate synthase, 59.1 9 0.00031 32.0 4.0 39 14-53 5-44 (207)
100 2ywr_A Phosphoribosylglycinami 59.0 20 0.00069 30.1 6.3 103 15-143 2-111 (216)
101 1lss_A TRK system potassium up 59.0 13 0.00045 28.2 4.9 32 14-50 4-35 (140)
102 3kcq_A Phosphoribosylglycinami 58.9 25 0.00086 29.5 6.8 101 12-143 6-113 (215)
103 3kjh_A CO dehydrogenase/acetyl 58.6 6.8 0.00023 33.6 3.5 37 15-51 1-37 (254)
104 2hy5_A Putative sulfurtransfer 57.6 15 0.00051 27.9 4.9 37 15-51 1-41 (130)
105 2ejb_A Probable aromatic acid 56.9 20 0.00067 29.5 5.7 36 15-51 2-37 (189)
106 1id1_A Putative potassium chan 56.9 8.5 0.00029 30.1 3.5 34 13-51 2-35 (153)
107 2ywx_A Phosphoribosylaminoimid 56.0 72 0.0025 25.1 12.1 132 274-437 2-144 (157)
108 2i2c_A Probable inorganic poly 55.7 6.4 0.00022 34.7 2.7 52 348-417 36-93 (272)
109 2l2q_A PTS system, cellobiose- 55.6 16 0.00053 26.9 4.5 38 13-50 3-40 (109)
110 2fb6_A Conserved hypothetical 54.5 14 0.00046 27.7 4.0 38 14-51 7-48 (117)
111 1qzu_A Hypothetical protein MD 53.9 12 0.0004 31.4 3.9 44 12-56 17-61 (206)
112 4b4k_A N5-carboxyaminoimidazol 53.2 88 0.003 25.2 11.3 140 270-438 21-174 (181)
113 2b8t_A Thymidine kinase; deoxy 52.8 77 0.0026 26.7 8.9 40 13-52 10-50 (223)
114 3qvl_A Putative hydantoin race 51.8 33 0.0011 29.5 6.6 95 14-140 1-97 (245)
115 1qkk_A DCTD, C4-dicarboxylate 51.2 38 0.0013 26.0 6.6 63 368-435 74-136 (155)
116 1p3y_1 MRSD protein; flavoprot 50.7 13 0.00044 30.7 3.7 37 14-51 8-44 (194)
117 3ors_A N5-carboxyaminoimidazol 49.4 96 0.0033 24.5 10.3 138 271-437 3-154 (163)
118 1g63_A Epidermin modifying enz 48.8 14 0.00047 30.2 3.4 38 16-54 4-41 (181)
119 3kuu_A Phosphoribosylaminoimid 48.7 1E+02 0.0035 24.6 10.5 142 271-440 12-166 (174)
120 1jx7_A Hypothetical protein YC 48.2 21 0.00071 26.3 4.3 36 16-51 3-43 (117)
121 3l7i_A Teichoic acid biosynthe 47.7 8.3 0.00028 39.4 2.5 108 337-455 605-718 (729)
122 2h31_A Multifunctional protein 47.3 1.2E+02 0.004 28.4 9.8 138 270-436 264-411 (425)
123 2c5m_A CTP synthase; cytidine 46.6 14 0.00046 31.9 3.1 39 13-51 21-62 (294)
124 3rg8_A Phosphoribosylaminoimid 46.2 1.1E+02 0.0037 24.2 9.2 137 272-436 3-148 (159)
125 1yt5_A Inorganic polyphosphate 46.0 10 0.00036 32.9 2.5 53 347-417 41-96 (258)
126 3q0i_A Methionyl-tRNA formyltr 45.8 34 0.0012 30.7 5.9 35 12-51 5-39 (318)
127 2p90_A Hypothetical protein CG 45.1 1.7E+02 0.0058 26.1 11.3 149 270-434 101-266 (319)
128 3bfv_A CAPA1, CAPB2, membrane 44.7 22 0.00074 31.1 4.4 40 12-51 79-120 (271)
129 4dll_A 2-hydroxy-3-oxopropiona 44.7 25 0.00086 31.5 5.0 34 12-50 29-62 (320)
130 2r85_A PURP protein PF1517; AT 44.5 19 0.00066 32.3 4.2 32 14-51 2-33 (334)
131 2g1u_A Hypothetical protein TM 44.4 24 0.00081 27.6 4.3 34 13-51 18-51 (155)
132 3dfu_A Uncharacterized protein 44.0 17 0.00057 31.0 3.4 34 12-50 4-37 (232)
133 2a3d_A Protein (de novo three- 44.0 34 0.0012 21.2 3.8 32 420-455 4-35 (73)
134 2d1p_A TUSD, hypothetical UPF0 43.6 40 0.0014 26.0 5.3 39 13-51 11-53 (140)
135 1u7z_A Coenzyme A biosynthesis 43.4 26 0.00089 29.7 4.5 22 30-51 36-57 (226)
136 3l77_A Short-chain alcohol deh 43.1 26 0.00089 29.5 4.6 34 14-50 1-34 (235)
137 4e21_A 6-phosphogluconate dehy 43.1 17 0.00058 33.4 3.5 42 4-50 12-53 (358)
138 3eag_A UDP-N-acetylmuramate:L- 43.1 24 0.00082 31.8 4.6 33 14-50 4-36 (326)
139 1jkx_A GART;, phosphoribosylgl 43.0 96 0.0033 25.8 7.9 104 15-143 1-110 (212)
140 4hb9_A Similarities with proba 42.8 16 0.00056 33.8 3.5 30 14-48 1-30 (412)
141 3of5_A Dethiobiotin synthetase 42.6 25 0.00086 29.8 4.4 37 13-49 2-40 (228)
142 1dhr_A Dihydropteridine reduct 42.5 27 0.00091 29.7 4.6 36 13-51 5-40 (241)
143 3gpi_A NAD-dependent epimerase 42.4 28 0.00096 30.3 4.9 33 14-51 3-35 (286)
144 1bg6_A N-(1-D-carboxylethyl)-L 42.0 17 0.0006 33.0 3.5 33 13-50 3-35 (359)
145 3s40_A Diacylglycerol kinase; 41.8 32 0.0011 30.6 5.2 83 271-378 10-98 (304)
146 4e5s_A MCCFLIKE protein (BA_56 41.6 44 0.0015 30.2 6.0 72 285-377 63-136 (331)
147 3trh_A Phosphoribosylaminoimid 41.3 1.3E+02 0.0046 23.9 12.0 138 271-437 6-157 (169)
148 3lrx_A Putative hydrogenase; a 41.2 23 0.00078 28.0 3.7 36 14-52 23-58 (158)
149 4gi5_A Quinone reductase; prot 40.8 46 0.0016 29.2 5.9 41 9-49 17-60 (280)
150 2bw0_A 10-FTHFDH, 10-formyltet 39.5 40 0.0014 30.4 5.4 33 13-50 21-53 (329)
151 3bul_A Methionine synthase; tr 39.4 30 0.001 34.0 4.8 40 12-51 96-135 (579)
152 2pju_A Propionate catabolism o 38.5 26 0.0009 29.6 3.8 67 348-417 64-153 (225)
153 3guy_A Short-chain dehydrogena 38.3 25 0.00084 29.6 3.7 33 15-50 1-33 (230)
154 3llv_A Exopolyphosphatase-rela 38.2 18 0.00063 27.6 2.6 32 15-51 7-38 (141)
155 1fjh_A 3alpha-hydroxysteroid d 38.0 39 0.0013 28.8 5.0 33 15-50 1-33 (257)
156 3gl9_A Response regulator; bet 38.0 1.1E+02 0.0038 22.0 7.3 47 368-416 75-121 (122)
157 3zzm_A Bifunctional purine bio 38.0 24 0.00081 33.7 3.6 99 13-122 8-111 (523)
158 3czc_A RMPB; alpha/beta sandwi 37.8 29 0.001 25.4 3.5 44 6-49 10-55 (110)
159 3ug7_A Arsenical pump-driving 37.5 23 0.00078 32.3 3.5 41 12-52 22-64 (349)
160 1z82_A Glycerol-3-phosphate de 37.3 23 0.0008 32.0 3.5 40 6-50 6-45 (335)
161 1uzm_A 3-oxoacyl-[acyl-carrier 37.1 46 0.0016 28.3 5.3 34 14-50 14-47 (247)
162 4h3k_B RNA polymerase II subun 37.0 1.8E+02 0.006 24.0 9.7 36 13-51 24-59 (214)
163 3ew7_A LMO0794 protein; Q8Y8U8 37.0 50 0.0017 27.1 5.4 33 15-51 1-33 (221)
164 1ehi_A LMDDL2, D-alanine:D-lac 36.7 34 0.0012 31.5 4.6 38 13-50 2-44 (377)
165 3nbm_A PTS system, lactose-spe 36.4 31 0.0011 25.2 3.4 40 11-50 3-42 (108)
166 3qvo_A NMRA family protein; st 36.4 59 0.002 27.3 5.8 35 14-51 22-57 (236)
167 3k96_A Glycerol-3-phosphate de 36.0 22 0.00077 32.5 3.2 35 12-51 27-61 (356)
168 3obi_A Formyltetrahydrofolate 35.9 2E+02 0.0068 25.2 9.2 107 11-143 86-197 (288)
169 4h1h_A LMO1638 protein; MCCF-l 35.8 56 0.0019 29.4 5.8 71 285-376 63-135 (327)
170 3l18_A Intracellular protease 35.4 86 0.0029 24.6 6.4 38 13-51 1-38 (168)
171 1gsa_A Glutathione synthetase; 35.4 29 0.001 30.7 3.9 37 15-51 2-41 (316)
172 2qyt_A 2-dehydropantoate 2-red 35.3 14 0.00047 33.1 1.6 34 12-50 6-45 (317)
173 2vqe_B 30S ribosomal protein S 35.2 2.2E+02 0.0074 24.5 9.9 32 112-143 157-190 (256)
174 3qjg_A Epidermin biosynthesis 35.2 1.4E+02 0.0048 23.9 7.4 112 271-394 6-141 (175)
175 2ew2_A 2-dehydropantoate 2-red 35.2 25 0.00087 31.1 3.4 32 14-50 3-34 (316)
176 1e2b_A Enzyme IIB-cellobiose; 35.2 84 0.0029 22.7 5.6 38 14-51 3-40 (106)
177 1ks9_A KPA reductase;, 2-dehyd 35.0 26 0.00089 30.6 3.4 31 15-50 1-31 (291)
178 3i4f_A 3-oxoacyl-[acyl-carrier 34.9 51 0.0017 28.2 5.3 35 13-50 5-39 (264)
179 3h2s_A Putative NADH-flavin re 34.8 56 0.0019 26.9 5.4 33 15-51 1-33 (224)
180 3pdi_B Nitrogenase MOFE cofact 34.8 1E+02 0.0036 29.2 7.7 87 14-140 313-399 (458)
181 1tvm_A PTS system, galactitol- 34.6 75 0.0026 23.3 5.4 39 12-50 19-58 (113)
182 1zl0_A Hypothetical protein PA 34.6 71 0.0024 28.5 6.1 74 284-378 64-139 (311)
183 4hn9_A Iron complex transport 34.3 62 0.0021 29.1 5.9 39 100-143 108-146 (335)
184 2x4g_A Nucleoside-diphosphate- 34.1 57 0.0019 29.1 5.7 35 13-51 12-46 (342)
185 2bon_A Lipid kinase; DAG kinas 34.0 50 0.0017 29.8 5.2 81 271-378 31-119 (332)
186 1zmt_A Haloalcohol dehalogenas 34.0 36 0.0012 29.1 4.1 32 15-49 1-32 (254)
187 4g65_A TRK system potassium up 33.9 12 0.00042 35.7 1.1 34 13-51 2-35 (461)
188 3fwz_A Inner membrane protein 33.7 23 0.00079 27.1 2.5 33 14-51 7-39 (140)
189 3oow_A Phosphoribosylaminoimid 33.7 1.8E+02 0.0061 23.1 11.7 140 272-440 6-159 (166)
190 3iqw_A Tail-anchored protein t 33.6 32 0.0011 31.2 3.7 40 12-51 13-53 (334)
191 3l4b_C TRKA K+ channel protien 33.6 16 0.00055 30.6 1.7 32 15-51 1-32 (218)
192 3sbx_A Putative uncharacterize 33.5 73 0.0025 26.0 5.5 37 12-49 11-51 (189)
193 3cio_A ETK, tyrosine-protein k 33.3 32 0.0011 30.5 3.7 41 12-52 101-143 (299)
194 1mxh_A Pteridine reductase 2; 33.1 46 0.0016 28.8 4.7 32 16-50 12-43 (276)
195 2jk1_A HUPR, hydrogenase trans 33.1 86 0.0029 23.2 5.8 49 368-417 71-119 (139)
196 3h7a_A Short chain dehydrogena 32.6 51 0.0017 28.2 4.8 34 14-50 6-39 (252)
197 2q5c_A NTRC family transcripti 32.6 21 0.00072 29.5 2.2 30 347-379 51-80 (196)
198 3k9g_A PF-32 protein; ssgcid, 32.5 44 0.0015 28.8 4.4 39 12-51 24-64 (267)
199 3fgn_A Dethiobiotin synthetase 32.3 48 0.0016 28.6 4.5 38 12-49 23-62 (251)
200 3cky_A 2-hydroxymethyl glutara 32.2 48 0.0017 29.1 4.7 33 13-50 3-35 (301)
201 3qrx_B Melittin; calcium-bindi 32.1 17 0.00057 18.2 0.9 17 358-374 1-17 (26)
202 2pk3_A GDP-6-deoxy-D-LYXO-4-he 32.0 38 0.0013 30.0 4.1 39 10-51 7-45 (321)
203 1u0t_A Inorganic polyphosphate 32.0 17 0.00058 32.5 1.6 32 344-377 72-107 (307)
204 3sr3_A Microcin immunity prote 31.9 68 0.0023 29.0 5.7 72 285-377 64-137 (336)
205 2dkn_A 3-alpha-hydroxysteroid 31.8 54 0.0018 27.7 4.9 33 15-50 1-33 (255)
206 3hwr_A 2-dehydropantoate 2-red 31.8 32 0.0011 30.8 3.4 31 13-48 18-48 (318)
207 2afh_E Nitrogenase iron protei 31.8 50 0.0017 28.9 4.7 37 15-51 2-39 (289)
208 3i83_A 2-dehydropantoate 2-red 31.7 32 0.0011 30.8 3.4 32 15-51 3-34 (320)
209 3ghy_A Ketopantoate reductase 31.6 26 0.0009 31.6 2.9 32 14-50 3-34 (335)
210 2an1_A Putative kinase; struct 31.5 20 0.00068 31.7 2.0 31 345-377 61-95 (292)
211 1e4e_A Vancomycin/teicoplanin 31.5 32 0.0011 31.1 3.5 38 13-50 2-43 (343)
212 4e3z_A Putative oxidoreductase 31.3 53 0.0018 28.4 4.8 36 12-50 23-58 (272)
213 1eiw_A Hypothetical protein MT 31.3 36 0.0012 25.0 3.1 65 345-416 36-109 (111)
214 3f9i_A 3-oxoacyl-[acyl-carrier 31.2 64 0.0022 27.3 5.2 38 10-50 9-46 (249)
215 3hn2_A 2-dehydropantoate 2-red 31.1 35 0.0012 30.4 3.6 32 15-51 3-34 (312)
216 3dfz_A SIRC, precorrin-2 dehyd 31.1 2.3E+02 0.008 23.7 8.6 146 264-436 26-185 (223)
217 3qsg_A NAD-binding phosphogluc 31.1 26 0.00088 31.4 2.7 35 11-50 21-56 (312)
218 3tl4_X Glutaminyl-tRNA synthet 31.0 36 0.0012 27.8 3.3 50 380-435 100-153 (187)
219 2hy5_B Intracellular sulfur ox 31.0 68 0.0023 24.5 4.7 35 17-51 8-45 (136)
220 2qv7_A Diacylglycerol kinase D 30.9 40 0.0014 30.5 4.0 82 273-378 28-115 (337)
221 2bru_C NAD(P) transhydrogenase 30.9 59 0.002 25.9 4.2 39 13-51 29-70 (186)
222 3sju_A Keto reductase; short-c 30.7 48 0.0016 28.8 4.4 35 13-50 22-56 (279)
223 1iow_A DD-ligase, DDLB, D-ALA\ 30.5 66 0.0023 28.2 5.4 38 14-51 2-43 (306)
224 2wam_A RV2714, conserved hypot 30.5 3.1E+02 0.011 24.8 10.3 147 270-432 141-304 (351)
225 1f0y_A HCDH, L-3-hydroxyacyl-C 30.4 31 0.0011 30.5 3.1 31 15-50 16-46 (302)
226 4b79_A PA4098, probable short- 30.3 1.5E+02 0.0053 25.1 7.3 35 14-51 10-44 (242)
227 1wcv_1 SOJ, segregation protei 30.3 38 0.0013 29.1 3.6 39 13-51 4-44 (257)
228 3t4x_A Oxidoreductase, short c 30.3 68 0.0023 27.6 5.3 34 14-50 9-42 (267)
229 3gem_A Short chain dehydrogena 30.1 41 0.0014 29.0 3.8 35 14-51 26-60 (260)
230 2lpm_A Two-component response 30.1 33 0.0011 25.7 2.8 41 97-142 42-87 (123)
231 4h15_A Short chain alcohol deh 30.0 61 0.0021 28.0 4.9 34 14-50 10-43 (261)
232 4e5v_A Putative THUA-like prot 30.0 62 0.0021 28.4 4.9 39 12-51 2-43 (281)
233 2raf_A Putative dinucleotide-b 30.0 38 0.0013 28.1 3.4 33 13-50 18-50 (209)
234 1fmt_A Methionyl-tRNA FMet for 29.9 64 0.0022 28.9 5.0 34 13-51 2-35 (314)
235 3g0o_A 3-hydroxyisobutyrate de 29.8 29 0.00099 30.8 2.8 33 13-50 6-38 (303)
236 1p9o_A Phosphopantothenoylcyst 29.7 37 0.0013 30.3 3.4 24 30-53 67-90 (313)
237 3dqp_A Oxidoreductase YLBE; al 29.7 67 0.0023 26.4 5.0 33 15-51 1-33 (219)
238 1o5i_A 3-oxoacyl-(acyl carrier 29.5 67 0.0023 27.3 5.1 34 14-50 18-51 (249)
239 3ftp_A 3-oxoacyl-[acyl-carrier 29.4 83 0.0028 27.2 5.7 34 14-50 27-60 (270)
240 3doj_A AT3G25530, dehydrogenas 29.1 44 0.0015 29.7 3.9 34 12-50 19-52 (310)
241 3ppi_A 3-hydroxyacyl-COA dehyd 29.0 67 0.0023 27.8 5.1 34 14-50 29-62 (281)
242 3gdg_A Probable NADP-dependent 29.0 70 0.0024 27.4 5.2 36 14-51 19-55 (267)
243 3md9_A Hemin-binding periplasm 28.9 53 0.0018 28.0 4.3 37 100-141 51-89 (255)
244 3p19_A BFPVVD8, putative blue 28.9 52 0.0018 28.4 4.3 34 14-50 15-48 (266)
245 3t6k_A Response regulator rece 28.9 1.7E+02 0.0059 21.4 7.9 47 369-417 78-124 (136)
246 2x5n_A SPRPN10, 26S proteasome 28.8 89 0.003 25.5 5.4 37 15-51 107-144 (192)
247 1ooe_A Dihydropteridine reduct 28.8 65 0.0022 27.0 4.8 34 15-51 3-36 (236)
248 1oi4_A Hypothetical protein YH 28.8 1.3E+02 0.0045 24.3 6.5 41 11-52 20-60 (193)
249 3foj_A Uncharacterized protein 28.6 1.2E+02 0.004 21.3 5.5 34 13-50 55-88 (100)
250 1hdo_A Biliverdin IX beta redu 28.4 98 0.0034 24.8 5.8 33 15-51 4-36 (206)
251 1vi6_A 30S ribosomal protein S 28.3 57 0.002 27.1 4.0 32 112-143 114-147 (208)
252 2qs7_A Uncharacterized protein 28.2 72 0.0025 24.6 4.5 34 18-51 12-45 (144)
253 1t1j_A Hypothetical protein; s 28.1 72 0.0025 24.0 4.3 33 14-46 7-47 (125)
254 3qha_A Putative oxidoreductase 28.1 32 0.0011 30.4 2.7 32 14-50 15-46 (296)
255 3e8x_A Putative NAD-dependent 28.0 89 0.003 26.0 5.6 35 13-51 20-54 (236)
256 3d3j_A Enhancer of mRNA-decapp 28.0 42 0.0014 29.9 3.4 34 15-51 133-168 (306)
257 2i87_A D-alanine-D-alanine lig 27.9 33 0.0011 31.4 2.9 39 13-51 2-44 (364)
258 3rkr_A Short chain oxidoreduct 27.8 76 0.0026 27.1 5.2 34 14-50 28-61 (262)
259 3v8b_A Putative dehydrogenase, 27.8 63 0.0021 28.2 4.6 34 14-50 27-60 (283)
260 3ius_A Uncharacterized conserv 27.8 53 0.0018 28.4 4.2 32 15-51 6-37 (286)
261 3rfo_A Methionyl-tRNA formyltr 27.8 1E+02 0.0035 27.6 6.0 34 13-51 3-36 (317)
262 3imf_A Short chain dehydrogena 27.7 69 0.0023 27.4 4.8 33 15-50 6-38 (257)
263 4eg0_A D-alanine--D-alanine li 27.7 89 0.003 27.7 5.7 37 14-50 13-53 (317)
264 3r5x_A D-alanine--D-alanine li 27.7 28 0.00095 30.8 2.3 39 13-51 2-44 (307)
265 2zki_A 199AA long hypothetical 27.6 62 0.0021 26.3 4.3 37 14-51 4-41 (199)
266 2ph1_A Nucleotide-binding prot 27.6 44 0.0015 28.8 3.5 38 14-51 17-56 (262)
267 3end_A Light-independent proto 27.6 63 0.0022 28.5 4.7 40 12-51 38-78 (307)
268 3kcn_A Adenylate cyclase homol 27.5 1.1E+02 0.0039 22.9 5.7 48 368-417 75-123 (151)
269 3ea0_A ATPase, para family; al 27.5 48 0.0016 27.9 3.8 40 13-52 2-44 (245)
270 3un1_A Probable oxidoreductase 27.4 58 0.002 28.0 4.3 35 14-51 27-61 (260)
271 4h1h_A LMO1638 protein; MCCF-l 27.4 1.4E+02 0.0047 26.8 6.8 79 270-362 12-92 (327)
272 3d3k_A Enhancer of mRNA-decapp 27.4 45 0.0015 28.9 3.4 33 15-50 86-120 (259)
273 2etv_A Iron(III) ABC transport 27.3 45 0.0015 30.2 3.7 37 101-142 89-126 (346)
274 4dyv_A Short-chain dehydrogena 27.3 67 0.0023 27.8 4.7 35 13-50 26-60 (272)
275 3f67_A Putative dienelactone h 27.3 80 0.0027 25.9 5.2 36 15-50 32-67 (241)
276 3l6e_A Oxidoreductase, short-c 27.2 65 0.0022 27.1 4.5 33 15-50 3-35 (235)
277 3o26_A Salutaridine reductase; 27.2 65 0.0022 28.2 4.7 36 13-51 10-45 (311)
278 3nva_A CTP synthase; rossman f 27.0 65 0.0022 31.1 4.7 38 14-51 2-42 (535)
279 1jzt_A Hypothetical 27.5 kDa p 27.0 40 0.0014 29.0 3.0 33 15-50 59-93 (246)
280 3rih_A Short chain dehydrogena 26.9 83 0.0028 27.6 5.3 35 14-51 40-74 (293)
281 3hly_A Flavodoxin-like domain; 26.8 82 0.0028 24.7 4.7 36 15-50 1-37 (161)
282 1txg_A Glycerol-3-phosphate de 26.7 35 0.0012 30.6 2.8 31 15-50 1-31 (335)
283 3rp8_A Flavoprotein monooxygen 26.6 60 0.002 30.0 4.5 40 6-50 15-54 (407)
284 3icc_A Putative 3-oxoacyl-(acy 26.6 86 0.003 26.5 5.3 34 14-50 6-39 (255)
285 2pn1_A Carbamoylphosphate synt 26.6 76 0.0026 28.2 5.1 34 12-51 2-37 (331)
286 3l3b_A ES1 family protein; ssg 26.6 1.2E+02 0.0041 25.8 6.0 35 16-51 25-64 (242)
287 3dhn_A NAD-dependent epimerase 26.6 50 0.0017 27.4 3.7 33 15-51 5-37 (227)
288 3to5_A CHEY homolog; alpha(5)b 26.5 66 0.0023 24.4 4.0 47 368-416 86-132 (134)
289 1mv8_A GMD, GDP-mannose 6-dehy 26.5 62 0.0021 30.5 4.6 31 15-50 1-31 (436)
290 2q8p_A Iron-regulated surface 26.5 93 0.0032 26.5 5.5 38 101-143 53-91 (260)
291 4egf_A L-xylulose reductase; s 26.4 84 0.0029 27.0 5.2 34 14-50 19-52 (266)
292 4da9_A Short-chain dehydrogena 26.3 82 0.0028 27.3 5.1 34 14-50 28-61 (280)
293 1jay_A Coenzyme F420H2:NADP+ o 26.3 49 0.0017 27.2 3.5 32 15-50 1-32 (212)
294 3f6r_A Flavodoxin; FMN binding 26.3 74 0.0025 24.3 4.4 37 15-51 2-39 (148)
295 3la6_A Tyrosine-protein kinase 26.3 48 0.0017 29.1 3.6 41 12-52 89-131 (286)
296 3m1a_A Putative dehydrogenase; 26.2 74 0.0025 27.5 4.8 34 14-50 4-37 (281)
297 1mio_B Nitrogenase molybdenum 26.2 3.7E+02 0.013 25.3 10.0 26 112-140 384-409 (458)
298 3nrb_A Formyltetrahydrofolate 26.1 3.3E+02 0.011 23.8 10.5 107 11-143 85-196 (287)
299 1qyd_A Pinoresinol-lariciresin 26.0 63 0.0021 28.4 4.4 33 15-51 5-37 (313)
300 1ydg_A Trp repressor binding p 26.0 92 0.0032 25.5 5.2 38 13-50 5-43 (211)
301 2o6l_A UDP-glucuronosyltransfe 25.8 2E+02 0.007 22.1 7.1 37 15-51 21-60 (170)
302 1byi_A Dethiobiotin synthase; 25.7 59 0.002 26.9 4.0 27 22-48 10-36 (224)
303 3grp_A 3-oxoacyl-(acyl carrier 25.7 91 0.0031 26.8 5.3 34 14-50 26-59 (266)
304 3q9l_A Septum site-determining 25.7 71 0.0024 27.1 4.6 36 16-51 3-40 (260)
305 3tqq_A Methionyl-tRNA formyltr 25.7 73 0.0025 28.5 4.6 33 14-51 2-34 (314)
306 3kbq_A Protein TA0487; structu 25.6 1.2E+02 0.004 24.4 5.3 82 273-377 6-97 (172)
307 4grd_A N5-CAIR mutase, phospho 25.5 2.6E+02 0.0088 22.3 10.4 140 270-438 11-164 (173)
308 3ucx_A Short chain dehydrogena 25.5 95 0.0033 26.6 5.4 34 14-50 10-43 (264)
309 3vtz_A Glucose 1-dehydrogenase 25.5 89 0.003 26.9 5.2 38 11-51 10-47 (269)
310 1e7w_A Pteridine reductase; di 25.4 78 0.0027 27.7 4.8 33 14-49 8-40 (291)
311 3bch_A 40S ribosomal protein S 25.4 65 0.0022 27.6 4.0 32 112-143 150-183 (253)
312 3eme_A Rhodanese-like domain p 25.3 1.1E+02 0.0037 21.6 4.8 34 13-50 55-88 (103)
313 3e9m_A Oxidoreductase, GFO/IDH 25.2 3.4E+02 0.011 24.0 9.2 90 272-379 7-102 (330)
314 3tzq_B Short-chain type dehydr 25.2 85 0.0029 27.0 5.0 34 14-50 10-43 (271)
315 2d1p_B TUSC, hypothetical UPF0 25.2 1E+02 0.0034 22.8 4.7 35 17-51 5-41 (119)
316 3n7t_A Macrophage binding prot 25.2 1.5E+02 0.005 25.4 6.3 37 15-51 10-57 (247)
317 4dim_A Phosphoribosylglycinami 25.2 65 0.0022 29.7 4.5 35 12-51 5-39 (403)
318 3obb_A Probable 3-hydroxyisobu 25.2 55 0.0019 29.0 3.7 28 16-48 5-32 (300)
319 3pef_A 6-phosphogluconate dehy 25.1 51 0.0018 28.8 3.5 31 15-50 2-32 (287)
320 4hcj_A THIJ/PFPI domain protei 25.0 1.3E+02 0.0043 24.2 5.6 39 12-51 5-44 (177)
321 3ego_A Probable 2-dehydropanto 25.0 38 0.0013 30.1 2.7 32 14-51 2-33 (307)
322 1wma_A Carbonyl reductase [NAD 24.9 83 0.0028 26.8 4.9 34 14-50 3-37 (276)
323 3op4_A 3-oxoacyl-[acyl-carrier 24.9 98 0.0034 26.2 5.3 34 14-50 8-41 (248)
324 4eso_A Putative oxidoreductase 24.8 79 0.0027 27.0 4.7 34 14-50 7-40 (255)
325 1vl8_A Gluconate 5-dehydrogena 24.8 88 0.003 26.9 5.0 34 14-50 20-53 (267)
326 2r7a_A Bacterial heme binding 24.7 71 0.0024 27.2 4.3 37 100-141 51-89 (256)
327 3v2h_A D-beta-hydroxybutyrate 24.7 72 0.0024 27.8 4.4 34 14-50 24-57 (281)
328 1u9c_A APC35852; structural ge 24.7 1.3E+02 0.0046 24.9 6.0 36 16-51 7-51 (224)
329 3ic5_A Putative saccharopine d 24.6 63 0.0021 23.2 3.5 31 15-50 6-37 (118)
330 1f4p_A Flavodoxin; electron tr 24.6 65 0.0022 24.5 3.7 36 15-50 1-37 (147)
331 1g3q_A MIND ATPase, cell divis 24.5 79 0.0027 26.4 4.6 36 16-51 3-40 (237)
332 2o8n_A APOA-I binding protein; 24.5 55 0.0019 28.4 3.4 33 15-50 80-114 (265)
333 3qxc_A Dethiobiotin synthetase 24.4 73 0.0025 27.2 4.2 38 12-49 18-57 (242)
334 3n0v_A Formyltetrahydrofolate 24.4 1.5E+02 0.0053 25.9 6.4 111 9-143 85-197 (286)
335 3kkl_A Probable chaperone prot 24.4 1.3E+02 0.0044 25.6 5.8 37 15-51 4-51 (244)
336 3ia7_A CALG4; glycosysltransfe 24.4 1.2E+02 0.0041 27.5 6.2 35 272-308 6-40 (402)
337 2vrn_A Protease I, DR1199; cys 24.3 1.6E+02 0.0056 23.5 6.3 38 13-51 8-45 (190)
338 4iin_A 3-ketoacyl-acyl carrier 24.3 86 0.003 26.9 4.9 34 14-50 28-61 (271)
339 3g79_A NDP-N-acetyl-D-galactos 24.3 82 0.0028 30.1 4.9 35 12-51 16-52 (478)
340 3grc_A Sensor protein, kinase; 24.3 1.3E+02 0.0045 22.0 5.5 49 368-417 79-127 (140)
341 3fkq_A NTRC-like two-domain pr 24.3 68 0.0023 29.4 4.3 40 12-51 140-181 (373)
342 3psh_A Protein HI_1472; substr 24.2 69 0.0024 28.5 4.3 38 101-143 77-115 (326)
343 3u3x_A Oxidoreductase; structu 24.2 3.3E+02 0.011 24.5 9.0 92 271-379 27-123 (361)
344 3s55_A Putative short-chain de 24.2 90 0.0031 27.0 5.0 34 14-50 9-42 (281)
345 3lyu_A Putative hydrogenase; t 24.1 68 0.0023 24.6 3.7 35 14-51 18-52 (142)
346 3ijr_A Oxidoreductase, short c 24.0 81 0.0028 27.6 4.7 35 14-51 46-80 (291)
347 3gaf_A 7-alpha-hydroxysteroid 24.0 80 0.0027 26.9 4.5 34 14-50 11-44 (256)
348 3m6m_D Sensory/regulatory prot 24.0 1E+02 0.0036 23.0 4.8 35 10-48 10-44 (143)
349 1cp2_A CP2, nitrogenase iron p 24.0 71 0.0024 27.4 4.2 35 17-51 4-38 (269)
350 3ksu_A 3-oxoacyl-acyl carrier 23.9 85 0.0029 26.9 4.7 34 14-50 10-43 (262)
351 2ph3_A 3-oxoacyl-[acyl carrier 23.8 92 0.0032 26.0 4.9 32 15-49 1-32 (245)
352 4dqx_A Probable oxidoreductase 23.8 83 0.0029 27.3 4.7 34 14-50 26-59 (277)
353 2ehd_A Oxidoreductase, oxidore 23.8 1.1E+02 0.0037 25.5 5.3 32 16-50 6-37 (234)
354 3abi_A Putative uncharacterize 23.7 69 0.0024 29.2 4.3 36 9-50 11-46 (365)
355 2gdz_A NAD+-dependent 15-hydro 23.7 1.1E+02 0.0039 26.0 5.5 33 15-50 7-39 (267)
356 3tpc_A Short chain alcohol deh 23.7 1.1E+02 0.0037 26.0 5.3 35 14-51 6-40 (257)
357 3orf_A Dihydropteridine reduct 23.6 83 0.0028 26.7 4.5 34 15-51 22-55 (251)
358 1xfi_A Unknown protein; struct 23.6 84 0.0029 28.8 4.6 37 14-51 212-250 (367)
359 2xdo_A TETX2 protein; tetracyc 23.5 59 0.002 29.9 3.8 37 9-50 21-57 (398)
360 4gbj_A 6-phosphogluconate dehy 23.5 65 0.0022 28.5 3.9 28 16-48 7-34 (297)
361 3f1l_A Uncharacterized oxidore 23.5 86 0.0029 26.6 4.6 34 14-50 11-44 (252)
362 3lf2_A Short chain oxidoreduct 23.4 86 0.0029 26.9 4.7 34 14-50 7-40 (265)
363 2h78_A Hibadh, 3-hydroxyisobut 23.4 63 0.0022 28.4 3.8 31 15-50 4-34 (302)
364 3oid_A Enoyl-[acyl-carrier-pro 23.4 1E+02 0.0035 26.3 5.1 34 14-50 3-36 (258)
365 1n2z_A Vitamin B12 transport p 23.4 1.2E+02 0.0043 25.4 5.6 39 100-143 49-89 (245)
366 3tem_A Ribosyldihydronicotinam 23.4 1.1E+02 0.0036 25.8 5.0 37 14-50 1-40 (228)
367 1x1t_A D(-)-3-hydroxybutyrate 23.4 84 0.0029 26.8 4.6 33 15-50 4-36 (260)
368 3nyw_A Putative oxidoreductase 23.3 71 0.0024 27.2 4.0 34 14-50 6-39 (250)
369 3gvc_A Oxidoreductase, probabl 23.3 1E+02 0.0036 26.6 5.2 34 14-50 28-61 (277)
370 3dtt_A NADP oxidoreductase; st 23.3 65 0.0022 27.4 3.7 35 11-50 16-50 (245)
371 3pxx_A Carveol dehydrogenase; 23.3 1E+02 0.0035 26.6 5.2 35 14-51 9-43 (287)
372 4fgs_A Probable dehydrogenase 23.2 1E+02 0.0034 26.9 5.0 34 14-50 28-61 (273)
373 3kkj_A Amine oxidase, flavin-c 23.2 43 0.0015 28.3 2.6 19 31-49 14-32 (336)
374 3edm_A Short chain dehydrogena 23.2 83 0.0028 26.9 4.5 34 14-50 7-40 (259)
375 3sc4_A Short chain dehydrogena 23.1 84 0.0029 27.4 4.6 35 14-51 8-42 (285)
376 2rhc_B Actinorhodin polyketide 23.1 1.3E+02 0.0043 26.0 5.7 33 15-50 22-54 (277)
377 3ezl_A Acetoacetyl-COA reducta 23.0 96 0.0033 26.3 4.9 36 12-50 10-45 (256)
378 3i1j_A Oxidoreductase, short c 23.0 1.1E+02 0.0038 25.6 5.3 34 14-50 13-46 (247)
379 2q62_A ARSH; alpha/beta, flavo 23.0 1.2E+02 0.0042 25.9 5.4 39 12-50 32-73 (247)
380 3enk_A UDP-glucose 4-epimerase 23.0 76 0.0026 28.3 4.4 33 14-50 5-37 (341)
381 3tla_A MCCF; serine protease, 22.9 97 0.0033 28.4 5.0 72 285-377 94-167 (371)
382 1zi8_A Carboxymethylenebutenol 22.9 1E+02 0.0036 25.1 5.0 36 15-50 28-63 (236)
383 1nff_A Putative oxidoreductase 22.8 1.2E+02 0.0042 25.8 5.5 33 15-50 7-39 (260)
384 4ezb_A Uncharacterized conserv 22.8 56 0.0019 29.2 3.4 32 14-50 24-56 (317)
385 2rir_A Dipicolinate synthase, 22.8 1.1E+02 0.0038 26.9 5.3 34 11-49 4-37 (300)
386 3d7l_A LIN1944 protein; APC893 22.8 1.3E+02 0.0043 24.2 5.4 33 14-51 3-35 (202)
387 4fn4_A Short chain dehydrogena 22.7 88 0.003 26.9 4.5 34 14-50 6-39 (254)
388 1mio_A Nitrogenase molybdenum 22.7 4.3E+02 0.015 25.5 9.7 26 112-140 455-480 (533)
389 2g36_A Tryptophanyl-tRNA synth 22.6 65 0.0022 29.2 3.7 36 16-51 16-53 (340)
390 3u7q_B Nitrogenase molybdenum- 22.6 5.2E+02 0.018 24.8 11.4 33 14-51 364-396 (523)
391 1zmo_A Halohydrin dehalogenase 22.5 66 0.0023 27.2 3.7 31 15-48 1-31 (244)
392 2xj4_A MIPZ; replication, cell 22.5 93 0.0032 27.1 4.7 37 15-51 4-42 (286)
393 2gf2_A Hibadh, 3-hydroxyisobut 22.5 52 0.0018 28.8 3.0 31 15-50 1-31 (296)
394 2y0c_A BCEC, UDP-glucose dehyd 22.4 58 0.002 31.1 3.5 33 13-50 7-39 (478)
395 2a87_A TRXR, TR, thioredoxin r 22.3 37 0.0013 30.4 2.1 44 1-49 1-44 (335)
396 2ae2_A Protein (tropinone redu 22.3 1.1E+02 0.0037 26.1 5.1 33 15-50 9-41 (260)
397 1d7o_A Enoyl-[acyl-carrier pro 22.3 1.2E+02 0.0039 26.5 5.3 33 14-49 7-41 (297)
398 3r6d_A NAD-dependent epimerase 22.3 94 0.0032 25.5 4.6 34 15-51 5-39 (221)
399 2qq5_A DHRS1, dehydrogenase/re 22.2 1E+02 0.0034 26.3 4.8 33 15-50 5-37 (260)
400 4g81_D Putative hexonate dehyd 22.2 79 0.0027 27.2 4.0 33 14-49 8-40 (255)
401 2pnf_A 3-oxoacyl-[acyl-carrier 22.2 1.4E+02 0.0048 24.9 5.7 33 15-50 7-39 (248)
402 4e5s_A MCCFLIKE protein (BA_56 22.2 2E+02 0.0068 25.8 6.8 79 270-362 12-92 (331)
403 1uls_A Putative 3-oxoacyl-acyl 22.1 96 0.0033 26.2 4.6 33 15-50 5-37 (245)
404 3m2t_A Probable dehydrogenase; 22.1 2.6E+02 0.0089 25.2 7.9 90 272-379 7-103 (359)
405 3uve_A Carveol dehydrogenase ( 22.1 99 0.0034 26.8 4.8 34 14-50 10-43 (286)
406 3svt_A Short-chain type dehydr 22.1 1E+02 0.0035 26.7 4.9 34 14-50 10-43 (281)
407 3dii_A Short-chain dehydrogena 22.0 92 0.0032 26.3 4.5 32 16-50 3-34 (247)
408 1xrs_B D-lysine 5,6-aminomutas 22.0 46 0.0016 28.9 2.4 40 12-51 118-166 (262)
409 3lou_A Formyltetrahydrofolate 22.0 2.3E+02 0.0078 24.9 7.0 111 9-143 90-202 (292)
410 3t7c_A Carveol dehydrogenase; 22.0 1.1E+02 0.0037 26.8 5.1 34 14-50 27-60 (299)
411 3gg2_A Sugar dehydrogenase, UD 21.9 59 0.002 30.8 3.4 31 15-50 3-33 (450)
412 3pk0_A Short-chain dehydrogena 21.9 1.2E+02 0.0041 25.9 5.3 34 14-50 9-42 (262)
413 3qiv_A Short-chain dehydrogena 21.8 98 0.0033 26.2 4.7 34 14-50 8-41 (253)
414 2p91_A Enoyl-[acyl-carrier-pro 21.8 1.2E+02 0.0039 26.4 5.2 34 15-50 21-55 (285)
415 4fu0_A D-alanine--D-alanine li 21.8 55 0.0019 29.8 3.1 38 13-50 2-43 (357)
416 4fs3_A Enoyl-[acyl-carrier-pro 21.8 88 0.003 26.7 4.3 36 14-50 5-40 (256)
417 4g6h_A Rotenone-insensitive NA 21.8 53 0.0018 31.6 3.2 36 11-51 39-74 (502)
418 3tjr_A Short chain dehydrogena 21.8 99 0.0034 27.2 4.8 34 14-50 30-63 (301)
419 3ruf_A WBGU; rossmann fold, UD 21.8 47 0.0016 29.9 2.7 35 13-51 24-58 (351)
420 3oig_A Enoyl-[acyl-carrier-pro 21.8 1.3E+02 0.0045 25.6 5.6 36 14-50 6-41 (266)
421 4dmm_A 3-oxoacyl-[acyl-carrier 21.8 1E+02 0.0035 26.5 4.8 34 14-50 27-60 (269)
422 1qgu_B Protein (nitrogenase mo 21.7 5.4E+02 0.018 24.7 10.9 33 14-51 360-392 (519)
423 2wsb_A Galactitol dehydrogenas 21.7 1.2E+02 0.004 25.5 5.2 33 15-50 11-43 (254)
424 2z1n_A Dehydrogenase; reductas 21.6 1.4E+02 0.0046 25.4 5.6 33 15-50 7-39 (260)
425 3uf0_A Short-chain dehydrogena 21.6 99 0.0034 26.7 4.7 34 14-50 30-63 (273)
426 2zat_A Dehydrogenase/reductase 21.6 1.4E+02 0.0047 25.3 5.6 33 15-50 14-46 (260)
427 2zqe_A MUTS2 protein; alpha/be 21.5 41 0.0014 23.2 1.6 56 289-362 21-77 (83)
428 4fc7_A Peroxisomal 2,4-dienoyl 21.5 1.2E+02 0.0042 26.1 5.3 34 14-50 26-59 (277)
429 3p9y_A CG14216, LD40846P; phos 21.5 3.3E+02 0.011 22.1 10.4 37 12-51 7-43 (198)
430 3lay_A Zinc resistance-associa 21.5 2.1E+02 0.0072 22.9 6.1 37 421-457 88-124 (175)
431 4imr_A 3-oxoacyl-(acyl-carrier 21.4 1.1E+02 0.0036 26.6 4.8 34 14-50 32-65 (275)
432 3osu_A 3-oxoacyl-[acyl-carrier 21.4 1.2E+02 0.004 25.6 5.1 33 15-50 4-36 (246)
433 2pd6_A Estradiol 17-beta-dehyd 21.4 1.2E+02 0.004 25.8 5.1 33 15-50 7-39 (264)
434 4egs_A Ribose 5-phosphate isom 21.3 76 0.0026 25.6 3.5 40 10-49 30-70 (180)
435 1g0o_A Trihydroxynaphthalene r 21.3 1.1E+02 0.0036 26.6 4.8 33 15-50 29-61 (283)
436 2rjn_A Response regulator rece 21.3 29 0.00099 26.6 1.0 48 368-417 78-126 (154)
437 1i36_A Conserved hypothetical 21.3 47 0.0016 28.6 2.4 29 15-48 1-29 (264)
438 4gkb_A 3-oxoacyl-[acyl-carrier 21.2 1.2E+02 0.0042 26.0 5.1 36 13-51 5-40 (258)
439 2a33_A Hypothetical protein; s 21.2 1.5E+02 0.0051 24.7 5.4 35 13-47 11-50 (215)
440 3qlj_A Short chain dehydrogena 21.2 1.3E+02 0.0044 26.7 5.5 34 14-50 26-59 (322)
441 3ioy_A Short-chain dehydrogena 21.2 1.1E+02 0.0038 27.1 5.0 34 14-50 7-40 (319)
442 1ta9_A Glycerol dehydrogenase; 21.2 1E+02 0.0035 29.2 4.9 91 261-378 82-178 (450)
443 3o1l_A Formyltetrahydrofolate 21.2 2.2E+02 0.0074 25.2 6.7 111 9-143 100-212 (302)
444 3k3p_A D-alanine--D-alanine li 21.2 62 0.0021 29.9 3.4 44 8-51 31-78 (383)
445 3ai3_A NADPH-sorbose reductase 21.1 1.2E+02 0.0041 25.8 5.1 33 15-50 7-39 (263)
446 2r79_A Periplasmic binding pro 21.0 93 0.0032 27.0 4.4 37 100-141 51-89 (283)
447 3rd5_A Mypaa.01249.C; ssgcid, 21.0 1E+02 0.0035 26.8 4.7 35 14-51 15-49 (291)
448 3ek2_A Enoyl-(acyl-carrier-pro 20.9 1.5E+02 0.005 25.3 5.7 37 12-50 11-48 (271)
449 3awd_A GOX2181, putative polyo 20.9 1E+02 0.0035 26.0 4.7 33 15-50 13-45 (260)
450 3i12_A D-alanine-D-alanine lig 20.9 66 0.0023 29.4 3.5 39 13-51 2-44 (364)
451 3ko8_A NAD-dependent epimerase 20.8 2.1E+02 0.0071 24.8 6.8 32 15-50 1-32 (312)
452 2zkq_b 40S ribosomal protein S 20.8 82 0.0028 27.7 3.7 31 113-143 118-150 (295)
453 3zv4_A CIS-2,3-dihydrobiphenyl 20.8 1E+02 0.0035 26.7 4.7 34 14-50 4-37 (281)
454 1zk4_A R-specific alcohol dehy 20.7 1.1E+02 0.0039 25.6 4.8 33 15-50 6-38 (251)
455 2wtm_A EST1E; hydrolase; 1.60A 20.7 1.3E+02 0.0046 24.9 5.3 36 15-50 27-64 (251)
456 4hp8_A 2-deoxy-D-gluconate 3-d 20.7 1.1E+02 0.0038 26.1 4.6 34 14-50 8-41 (247)
457 1yb1_A 17-beta-hydroxysteroid 20.7 1.1E+02 0.0036 26.4 4.7 33 15-50 31-63 (272)
458 2nm0_A Probable 3-oxacyl-(acyl 20.7 1.1E+02 0.0037 26.1 4.7 33 15-50 21-53 (253)
459 1fy2_A Aspartyl dipeptidase; s 20.7 1.2E+02 0.004 25.6 4.8 43 261-305 24-66 (229)
460 4ibo_A Gluconate dehydrogenase 20.7 99 0.0034 26.7 4.5 34 14-50 25-58 (271)
461 4id9_A Short-chain dehydrogena 20.7 96 0.0033 27.7 4.5 35 14-51 18-52 (347)
462 3k31_A Enoyl-(acyl-carrier-pro 20.6 1.1E+02 0.0039 26.6 4.9 35 14-50 29-64 (296)
463 2pzm_A Putative nucleotide sug 20.6 1.4E+02 0.0048 26.4 5.6 34 13-50 19-52 (330)
464 1pno_A NAD(P) transhydrogenase 20.6 1.1E+02 0.0037 24.3 4.0 40 12-51 21-63 (180)
465 4e6p_A Probable sorbitol dehyd 20.6 1.2E+02 0.0041 25.8 5.0 34 14-50 7-40 (259)
466 2rh8_A Anthocyanidin reductase 20.6 87 0.003 27.8 4.2 31 17-50 11-41 (338)
467 3pfb_A Cinnamoyl esterase; alp 20.6 1.4E+02 0.0046 25.0 5.4 36 15-50 46-83 (270)
468 3uxy_A Short-chain dehydrogena 20.6 90 0.0031 26.8 4.2 34 14-50 27-60 (266)
469 2ew8_A (S)-1-phenylethanol deh 20.5 1.2E+02 0.0042 25.5 5.0 33 15-50 7-39 (249)
470 1yb4_A Tartronic semialdehyde 20.5 72 0.0025 27.8 3.6 30 15-49 4-33 (295)
471 3e03_A Short chain dehydrogena 20.5 1.1E+02 0.0036 26.4 4.7 35 14-51 5-39 (274)
472 4ao6_A Esterase; hydrolase, th 20.5 98 0.0034 26.3 4.4 37 14-50 55-93 (259)
473 2bi7_A UDP-galactopyranose mut 20.5 1.2E+02 0.0043 27.7 5.3 33 14-51 3-35 (384)
474 3tsc_A Putative oxidoreductase 20.4 1.1E+02 0.0038 26.3 4.8 34 14-50 10-43 (277)
475 2f1k_A Prephenate dehydrogenas 20.4 70 0.0024 27.7 3.4 31 15-50 1-31 (279)
476 2a5l_A Trp repressor binding p 20.4 1.3E+02 0.0044 24.2 4.9 36 15-50 6-42 (200)
477 1hxh_A 3BETA/17BETA-hydroxyste 20.3 1.1E+02 0.0037 26.0 4.6 33 15-50 6-38 (253)
478 1ydh_A AT5G11950; structural g 20.3 1.6E+02 0.0055 24.5 5.4 36 13-48 7-47 (216)
479 2pd4_A Enoyl-[acyl-carrier-pro 20.3 1.2E+02 0.0042 26.0 5.0 35 15-51 6-41 (275)
480 1xkq_A Short-chain reductase f 20.3 1.3E+02 0.0046 25.8 5.3 33 15-50 6-38 (280)
481 2uvd_A 3-oxoacyl-(acyl-carrier 20.2 1.4E+02 0.0047 25.1 5.3 33 15-50 4-36 (246)
482 3dkr_A Esterase D; alpha beta 20.2 91 0.0031 25.5 4.1 35 15-49 22-56 (251)
483 1d4o_A NADP(H) transhydrogenas 20.2 1.1E+02 0.0038 24.3 4.0 39 13-51 21-62 (184)
484 3tl3_A Short-chain type dehydr 20.1 80 0.0028 26.9 3.7 34 14-50 8-41 (257)
485 2dpo_A L-gulonate 3-dehydrogen 20.1 63 0.0022 28.9 3.1 33 13-50 5-37 (319)
486 3lyl_A 3-oxoacyl-(acyl-carrier 20.1 1.2E+02 0.0041 25.5 4.8 33 15-50 5-37 (247)
487 1xu9_A Corticosteroid 11-beta- 20.1 1.1E+02 0.0039 26.4 4.8 33 15-50 28-60 (286)
488 2w36_A Endonuclease V; hypoxan 20.0 80 0.0027 26.6 3.4 32 112-143 102-140 (225)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1.3e-71 Score=538.38 Aligned_cols=437 Identities=27% Similarity=0.473 Sum_probs=358.1
Q ss_pred cccCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCC--CEEEEEeCCCCCCCC-----CCCCCceEEecCCCCCCCccCccc
Q 012678 9 VQQKKGRRVILFPLPLQGHINPMLQLASILYSKG--FSITIIHTNFNSPNP-----SNYPHFSFNSISESLWESEVSTEN 81 (458)
Q Consensus 9 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 81 (458)
|....+.||+++|+|++||++|++.||+.|+++| +.|||++++.+.... ...++++|..+|++++++.+...+
T Consensus 8 M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~~ 87 (454)
T 3hbf_A 8 MNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSSGN 87 (454)
T ss_dssp ----CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCCSC
T ss_pred ccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCccccCC
Confidence 3445688999999999999999999999999999 999999987332211 113579999999999887655444
Q ss_pred HHHHHHHHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCchhhHHHHHHHcCCCeEEEecchHHHHHHHHHHHHHHHhc
Q 012678 82 AISLLTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKG 161 (458)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (458)
....+..+.+.+...+.+.++++.++.+ .++|+||+|.+++|+..+|+++|||++.+++++++.+..+.+.+......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~ 165 (454)
T 3hbf_A 88 PREPIFLFIKAMQENFKHVIDEAVAETG--KNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKT 165 (454)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhc
Confidence 4444445555555667777777654322 47999999999999999999999999999999999988887766544321
Q ss_pred CC-CccCCCCccccCCCCCCCCCCCCCccc-CCCchHHHHHHHHHhhccCccEEEEcChhhhhHHHHHHhhhcCCCCccc
Q 012678 162 YL-AEQDSQLEKPVTELPPLRVKDIPIIVT-HDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDFPIPMFP 239 (458)
Q Consensus 162 ~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~pv~~ 239 (458)
.. ..........+|+++.++.++++.... .....+.+.+.+..+....++++++||+++||++.+..+++.+ +++++
T Consensus 166 ~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~-~~v~~ 244 (454)
T 3hbf_A 166 GSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF-KLLLN 244 (454)
T ss_dssp CHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS-SCEEE
T ss_pred CCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC-CCEEE
Confidence 10 111111223488888888888886553 3445567777788888889999999999999999888888754 57999
Q ss_pred cCCccccccccCCCcccCccccchhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccC
Q 012678 240 IGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLE 319 (458)
Q Consensus 240 vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~ 319 (458)
|||++..... ...+.+.++.+||+.++++++|||||||+...+.+++.+++.+|++.+++|||+++... ..
T Consensus 245 vGPl~~~~~~---~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~------~~ 315 (454)
T 3hbf_A 245 VGPFNLTTPQ---RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP------KE 315 (454)
T ss_dssp CCCHHHHSCC---SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH------HH
T ss_pred ECCccccccc---ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc------hh
Confidence 9999875432 12233456899999988899999999999998889999999999999999999998653 23
Q ss_pred CCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecC
Q 012678 320 PLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLE 399 (458)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~ 399 (458)
.+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|+++||+.||+++++.+|+|+.++
T Consensus 316 ~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~ 395 (454)
T 3hbf_A 316 KLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD 395 (454)
T ss_dssp HSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECG
T ss_pred cCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEec
Confidence 48899988999999999999999999999988899999999999999999999999999999999999998459999998
Q ss_pred C-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012678 400 R-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 400 ~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (458)
. .++.++|.++|+++|+++++++||++|+++++++++++++|||+++++++|++++.+
T Consensus 396 ~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~~ 454 (454)
T 3hbf_A 396 NGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS 454 (454)
T ss_dssp GGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHhC
Confidence 8 899999999999999984455899999999999999999999999999999999864
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=8.6e-66 Score=508.63 Aligned_cols=442 Identities=33% Similarity=0.654 Sum_probs=343.2
Q ss_pred cCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCC---------CCCceEEecCCCCCCCc---cC
Q 012678 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSN---------YPHFSFNSISESLWESE---VS 78 (458)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~---~~ 78 (458)
+++++||+++|++++||++|++.||++|++|||+|||++++.+...... .++++|+.+|+++++.. ..
T Consensus 5 ~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~ 84 (482)
T 2pq6_A 5 ANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDV 84 (482)
T ss_dssp ---CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC--------
T ss_pred cCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCc
Confidence 3557899999999999999999999999999999999998744221111 13799999998776521 11
Q ss_pred cccHHHHHHHHHHhcChhHHHHHHHHhhCC-CCCCCeeEEEecCchhhHHHHHHHcCCCeEEEecchHHHHHHHHHHHHH
Q 012678 79 TENAISLLTVLNDKCVVPFQDCLAKLISNG-DQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQIL 157 (458)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~-~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 157 (458)
..+...++..+...+...+.++++.+.... + .+||+||+|.+..|+..+|+++|||++.++++++.....+.+++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 162 (482)
T 2pq6_A 85 SQDVPTLCQSVRKNFLKPYCELLTRLNHSTNV--PPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSF 162 (482)
T ss_dssp -CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSS--CCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHhhhccC--CCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHH
Confidence 234444555555667777777887775320 1 4799999999999999999999999999999998877766666666
Q ss_pred HHhcCCCccCC---------CCccccCCCCCCCCCCCCCcccC--CCchHHHHHHHHHhhccCccEEEEcChhhhhHHHH
Q 012678 158 LEKGYLAEQDS---------QLEKPVTELPPLRVKDIPIIVTH--DTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTEL 226 (458)
Q Consensus 158 ~~~~~~p~~~~---------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~ 226 (458)
...++.|.... +..+.+++++.++..+++..... ....+.+.+....+....++++++||+++||++.+
T Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~ 242 (482)
T 2pq6_A 163 VERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVI 242 (482)
T ss_dssp HHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHH
T ss_pred HhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHH
Confidence 66677665421 12233556555555555533321 13345555666677778899999999999999988
Q ss_pred HHhhhcCCCCccccCCcccc-ccc-------cC-CCcccCccccchhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHH
Q 012678 227 TRLHKDFPIPMFPIGPFHKY-CLA-------SS-SSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLA 297 (458)
Q Consensus 227 ~~~~~~~~~pv~~vGpl~~~-~~~-------~~-~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~ 297 (458)
..+++.+ +++++|||++.. ... .. ...++.+.++.+||++++++++|||||||....+.+.+.+++.+|+
T Consensus 243 ~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~ 321 (482)
T 2pq6_A 243 NALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLA 321 (482)
T ss_dssp HHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHH
Confidence 8888876 679999999864 211 00 0112344457899999878999999999998878888999999999
Q ss_pred hCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHHHHhhCCccccccc
Q 012678 298 NSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPC 377 (458)
Q Consensus 298 ~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~ 377 (458)
+.+++|+|+++.+...+. ...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|+
T Consensus 322 ~~~~~~l~~~~~~~~~~~--~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~ 399 (482)
T 2pq6_A 322 NCKKSFLWIIRPDLVIGG--SVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPF 399 (482)
T ss_dssp HTTCEEEEECCGGGSTTT--GGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred hcCCcEEEEEcCCccccc--cccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCc
Confidence 999999999985421110 123788888888899999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHH-HHHhcceecCCcccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012678 378 FGDQLVNARYVS-HVWRVGLHLERKFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHIL 456 (458)
Q Consensus 378 ~~DQ~~na~~v~-~~~G~G~~l~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 456 (458)
++||+.||++++ + +|+|+.++.++++++|.++|+++|+|+++++||++|+++++++++++.+|||+++++++|++.+.
T Consensus 400 ~~dQ~~na~~~~~~-~G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 478 (482)
T 2pq6_A 400 FADQPTDCRFICNE-WEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 478 (482)
T ss_dssp STTHHHHHHHHHHT-SCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHH-hCEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 999999999997 6 69999998679999999999999998333379999999999999999999999999999999987
Q ss_pred cC
Q 012678 457 SF 458 (458)
Q Consensus 457 ~~ 458 (458)
++
T Consensus 479 ~~ 480 (482)
T 2pq6_A 479 LK 480 (482)
T ss_dssp CC
T ss_pred hc
Confidence 53
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=9.4e-63 Score=485.06 Aligned_cols=440 Identities=26% Similarity=0.400 Sum_probs=330.4
Q ss_pred cCCCCEEEEEcCCCCcCHHHHHHHHHHHHhC-CCEEEEEeCCCC--CCCCC----C-CCCceEEecCCCCCCCccCcccH
Q 012678 11 QKKGRRVILFPLPLQGHINPMLQLASILYSK-GFSITIIHTNFN--SPNPS----N-YPHFSFNSISESLWESEVSTENA 82 (458)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~--~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~ 82 (458)
..+++||+++|++++||++|++.||++|++| ||+|||++++.+ ..... . ..+++|+.++....++.....+.
T Consensus 3 ~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (480)
T 2vch_A 3 ESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDLSSSTRI 82 (480)
T ss_dssp ---CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTSCTTCCH
T ss_pred CCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCCCCCchhH
Confidence 3456899999999999999999999999998 999999999753 12111 1 25799999986432221111233
Q ss_pred HHHHHHHHHhcChhHHHHHHHHhhCCCCCCCe-eEEEecCchhhHHHHHHHcCCCeEEEecchHHHHHHHHHHHHHHHhc
Q 012678 83 ISLLTVLNDKCVVPFQDCLAKLISNGDQEEPV-TCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKG 161 (458)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~p-DlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (458)
...+......+...+.++++++... .++ |+||+|.+..|+..+|+++|||++.++++++.....+.+++......
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~~----~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 158 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVEG----GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETV 158 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHT----TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhHHHHHHHHHhccC----CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcC
Confidence 3333334455556677777776422 468 99999999988999999999999999999988777666655443322
Q ss_pred CCCccCCCCccccCCCCCCCCCCCCCcccCCCchHHHHHHHHHhhccCccEEEEcChhhhhHHHHHHhhhcC--CCCccc
Q 012678 162 YLAEQDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDF--PIPMFP 239 (458)
Q Consensus 162 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~--~~pv~~ 239 (458)
..+.........+|+++++....++..+..+.....+.+......++.+.++++|++.++|......+.+.. .+++++
T Consensus 159 ~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~~ 238 (480)
T 2vch_A 159 SCEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYP 238 (480)
T ss_dssp CSCGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEEE
T ss_pred CCcccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEEE
Confidence 222111111123566666665555544323322344444555556677788999999999998777665411 146999
Q ss_pred cCCccccccccCCCcccCccccchhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCC-----
Q 012678 240 IGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPG----- 314 (458)
Q Consensus 240 vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~----- 314 (458)
|||++..... ....+.+.++.+||++++++++|||||||+...+.+++.+++++|+..+++|||+++.....+
T Consensus 239 vGpl~~~~~~--~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~ 316 (480)
T 2vch_A 239 VGPLVNIGKQ--EAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYF 316 (480)
T ss_dssp CCCCCCCSCS--CC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTT
T ss_pred Eecccccccc--ccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccccccccc
Confidence 9999865321 000123345889999987899999999999988889999999999999999999998643110
Q ss_pred ----Cccc-CCCchhHHHhhcCCcceee-ccChhhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHH
Q 012678 315 ----VEWL-EPLPKGFLEMLDGRGHIVK-WAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYV 388 (458)
Q Consensus 315 ----~~~~-~~l~~~~~~~~~~~~~~~~-~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v 388 (458)
.+.. ..+|++|.++..++++++. |+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||+++
T Consensus 317 ~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l 396 (480)
T 2vch_A 317 DSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLL 396 (480)
T ss_dssp CC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH
T ss_pred ccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHHHH
Confidence 0111 3589999988888888886 999999999999999999999999999999999999999999999999997
Q ss_pred -HHHHhcceecCC----cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012678 389 -SHVWRVGLHLER----KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 389 -~~~~G~G~~l~~----~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (458)
++ +|+|+.++. .+++++|+++|+++|++++.++||++|+++++++++++.++|++..++++|++.+.+
T Consensus 397 ~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 397 SED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 67 799999975 489999999999999843338999999999999999999999999999999998763
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=6.1e-63 Score=483.31 Aligned_cols=433 Identities=27% Similarity=0.485 Sum_probs=328.3
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCE--EEEEeCCCCCC-----CCC-CCCCceEEecCCCCCCCccCcccHHH
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFS--ITIIHTNFNSP-----NPS-NYPHFSFNSISESLWESEVSTENAIS 84 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~--Vt~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (458)
+++||+++|+|++||++|++.||+.|++|||+ ||+++++.+.. ... ...+++++.+++++++..+...+...
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~~~~~~~~ 85 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGRPQE 85 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCCTTH
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCcccccCChHH
Confidence 45799999999999999999999999999765 57787752211 011 12479999999887765422222223
Q ss_pred HHHHHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCchhhHHHHHHHcCCCeEEEecchHHHHHHHHHHHHHHHh-cCC
Q 012678 85 LLTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEK-GYL 163 (458)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~-~~~ 163 (458)
.+..+...+...+.+.++++.+..+ .+||+||+|.++.|+..+|+++|||+|.++++++..+..+.+.+..... ++.
T Consensus 86 ~~~~~~~~~~~~~~~~l~~l~~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (456)
T 2c1x_A 86 DIELFTRAAPESFRQGMVMAVAETG--RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVS 163 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT--CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSS
T ss_pred HHHHHHHHhHHHHHHHHHHHHhccC--CCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCc
Confidence 3333334444455566665543211 5799999999999999999999999999999988776655444332221 221
Q ss_pred Cc-c-CCCCccccCCCCCCCCCCCCCccc--CCCchHHHHHHHHHhhccCccEEEEcChhhhhHHHHHHhhhcCCCCccc
Q 012678 164 AE-Q-DSQLEKPVTELPPLRVKDIPIIVT--HDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDFPIPMFP 239 (458)
Q Consensus 164 p~-~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~pv~~ 239 (458)
+. . .......+|+++.++.++++.... .....+.+.+.+..+....++++++||++++|++.+..+++.+ +++++
T Consensus 164 ~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~-~~~~~ 242 (456)
T 2c1x_A 164 GIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKL-KTYLN 242 (456)
T ss_dssp CCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHS-SCEEE
T ss_pred ccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcC-CCEEE
Confidence 11 0 111122456666666666653221 1122345555556566678899999999999998877777765 46999
Q ss_pred cCCccccccccCCCcccCccccchhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccC
Q 012678 240 IGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLE 319 (458)
Q Consensus 240 vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~ 319 (458)
|||+...... ..++.+.++.+|++..+++++|||||||....+.+.+.+++++++..+++|+|+++... ..
T Consensus 243 vGpl~~~~~~---~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~------~~ 313 (456)
T 2c1x_A 243 IGPFNLITPP---PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA------RV 313 (456)
T ss_dssp CCCHHHHC------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG------GG
T ss_pred ecCcccCccc---ccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc------hh
Confidence 9999865432 11333445789999887899999999999987888899999999999999999997643 23
Q ss_pred CCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecC
Q 012678 320 PLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLE 399 (458)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~ 399 (458)
.+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|+++||+.||+++++.+|+|+.++
T Consensus 314 ~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~ 393 (456)
T 2c1x_A 314 HLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE 393 (456)
T ss_dssp GSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG
T ss_pred hCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEec
Confidence 47888888888999999999999999999999999999999999999999999999999999999999998349999998
Q ss_pred C-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012678 400 R-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 400 ~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (458)
. .++.++|.++|+++|+|+++++||++|+++++.++++..+|||+++++++|++.+.+
T Consensus 394 ~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 394 GGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp GGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred CCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 7 799999999999999984344899999999999999999999999999999998864
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=3.5e-60 Score=465.08 Aligned_cols=426 Identities=26% Similarity=0.423 Sum_probs=323.1
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhC--CCEEEEEeCCCCCCC-C--------CCCCCceEEecCCCCCCCccCccc
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSK--GFSITIIHTNFNSPN-P--------SNYPHFSFNSISESLWESEVSTEN 81 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~ 81 (458)
+++||+++|+|++||++|++.||+.|++| ||+|||++++.+... . ....+++|+.+|++..++.+...+
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~ 87 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQELLKS 87 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCGGGGGS
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCcccccCC
Confidence 46899999999999999999999999999 999999999754311 0 112579999999753222211111
Q ss_pred HHHHHHHHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCchhhHHHHHHHcCCCeEEEecchHHHHHHHHHHHHHHHhc
Q 012678 82 AISLLTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKG 161 (458)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (458)
....+......+...+.++++++ . + .+||+||+|.+..|+..+|+++|||++.++++++..+..+.+++.....
T Consensus 88 ~~~~~~~~~~~~~~~~~~ll~~~-~--~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~- 161 (463)
T 2acv_A 88 PEFYILTFLESLIPHVKATIKTI-L--S--NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE- 161 (463)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHH-C--C--TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT-
T ss_pred ccHHHHHHHHhhhHHHHHHHHhc-c--C--CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc-
Confidence 11113333355556667777665 2 1 5799999999999999999999999999999988776655543321100
Q ss_pred CCCccCCCC---ccccCCC-CCCCCCCCCCcccCCCchHHHHHHHHHhhccCccEEEEcChhhhhHHHHHHhhhcC--CC
Q 012678 162 YLAEQDSQL---EKPVTEL-PPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDF--PI 235 (458)
Q Consensus 162 ~~p~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~--~~ 235 (458)
.+...... ...+|++ +.+..++++..+..+ ....+.+....+..+.++++++||++++|+.....+.+.. .+
T Consensus 162 -~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~ 239 (463)
T 2acv_A 162 -EVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIP 239 (463)
T ss_dssp -CCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSC
T ss_pred -CCCCCccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCC
Confidence 01111111 2345666 555555554322222 2344444455556678888999999999998877766644 45
Q ss_pred CccccCCcccccc-ccCCCcccCccccchhhccCCCCcEEEEEcCccc-cCCHHHHHHHHHHHHhCCCceEEEEcCCCCC
Q 012678 236 PMFPIGPFHKYCL-ASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIV-VVNVTEFLEIAWGLANSRVPFLWVVRPGLVP 313 (458)
Q Consensus 236 pv~~vGpl~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 313 (458)
++++|||+..... .......+.+.++.+|++..+++++|||||||.. ..+.+++.+++.+|++.+++|||+++.+.
T Consensus 240 ~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~-- 317 (463)
T 2acv_A 240 PIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEK-- 317 (463)
T ss_dssp CEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCG--
T ss_pred cEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCc--
Confidence 6999999986532 1000001223458899999888999999999999 77888899999999999999999998631
Q ss_pred CCcccCCCchhHHHhh--cCCcceeeccChhhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHH-HH
Q 012678 314 GVEWLEPLPKGFLEML--DGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYV-SH 390 (458)
Q Consensus 314 ~~~~~~~l~~~~~~~~--~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v-~~ 390 (458)
+.+|+++.++. ++|+++++|+||.++|.|+++++||||||+||++||+++|||||++|+++||+.||+++ ++
T Consensus 318 -----~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~ 392 (463)
T 2acv_A 318 -----KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKE 392 (463)
T ss_dssp -----GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT
T ss_pred -----ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHH
Confidence 12678887777 78999999999999999999999999999999999999999999999999999999995 78
Q ss_pred HHhcceec-C----C--cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012678 391 VWRVGLHL-E----R--KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHIL 456 (458)
Q Consensus 391 ~~G~G~~l-~----~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 456 (458)
+|+|+.+ + . .++.++|.++|+++|+++ ++||++|+++++++++++.+||++++++++|++++.
T Consensus 393 -~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 393 -WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp -SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT--CTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred -cCeEEEEecccCCCCccccHHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 6999999 3 2 489999999999999731 689999999999999999999999999999999874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=7.9e-46 Score=362.10 Aligned_cols=398 Identities=17% Similarity=0.207 Sum_probs=267.5
Q ss_pred cCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEecCCCCCCCccC----cccHHHHH
Q 012678 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEVS----TENAISLL 86 (458)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 86 (458)
++..|||+|++++++||++|++.||++|+++||+|+|++++........ .|++++.++..++..... ..+....+
T Consensus 9 ~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (424)
T 2iya_A 9 SVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA-AGATPVVYDSILPKESNPEESWPEDQESAM 87 (424)
T ss_dssp --CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-HTCEEEECCCCSCCTTCTTCCCCSSHHHHH
T ss_pred CcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh-CCCEEEecCccccccccchhhcchhHHHHH
Confidence 3456899999999999999999999999999999999998743322222 478899888765433211 12333333
Q ss_pred HHHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCchhhHHHHHHHcCCCeEEEecchHHHHHHHHHHHHHHHhcCCCcc
Q 012678 87 TVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGYLAEQ 166 (458)
Q Consensus 87 ~~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 166 (458)
..+...+.... +.+.++++. .+||+||+|.+..++..+|+.+|||++.+++.+..... +.........+..
T Consensus 88 ~~~~~~~~~~~-~~l~~~l~~----~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~----~~~~~~~~~~~~~ 158 (424)
T 2iya_A 88 GLFLDEAVRVL-PQLEDAYAD----DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEG----FEEDVPAVQDPTA 158 (424)
T ss_dssp HHHHHHHHHHH-HHHHHHTTT----SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTT----HHHHSGGGSCCCC
T ss_pred HHHHHHHHHHH-HHHHHHHhc----cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccc----ccccccccccccc
Confidence 33322222222 233344433 68999999998888999999999999999877541110 0000000000000
Q ss_pred CCCCccccCCCCCCCCCCCCCcccCCCchHHHHHHHHHh----------hccCccEEEEcChhhhhHHHHHHhhhcCCCC
Q 012678 167 DSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVS----------KTKACSGLIWNSFEDLEQTELTRLHKDFPIP 236 (458)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~s~~~le~~~~~~~~~~~~~p 236 (458)
........+...... ..+.... .....+.+.+..... ....++..+.++.++++++ ...++.+
T Consensus 159 ~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~~~~~ 231 (424)
T 2iya_A 159 DRGEEAAAPAGTGDA-EEGAEAE-DGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK-----GDTVGDN 231 (424)
T ss_dssp ----------------------H-HHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT-----GGGCCTT
T ss_pred ccccccccccccccc-hhhhccc-hhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC-----ccCCCCC
Confidence 000000000000000 0000000 000001111111111 1114567889999998874 2445667
Q ss_pred ccccCCccccccccCCCcccCccccchhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCc
Q 012678 237 MFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVE 316 (458)
Q Consensus 237 v~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~ 316 (458)
+++|||+...... ..+|++..+++++|||++||......+.+..+++++++.+.+++|.++..... +
T Consensus 232 ~~~vGp~~~~~~~-----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~--~ 298 (424)
T 2iya_A 232 YTFVGPTYGDRSH-----------QGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP--A 298 (424)
T ss_dssp EEECCCCCCCCGG-----------GCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSCG--G
T ss_pred EEEeCCCCCCccc-----------CCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCCh--H
Confidence 9999997643211 24577655678999999999986667788889999998888999988754210 0
Q ss_pred ccCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcce
Q 012678 317 WLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGL 396 (458)
Q Consensus 317 ~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~ 396 (458)
.+..++ +|+.+++|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++ +|+|+
T Consensus 299 ~~~~~~--------~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~ 367 (424)
T 2iya_A 299 DLGEVP--------PNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE-LGLGR 367 (424)
T ss_dssp GGCSCC--------TTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEE
T ss_pred HhccCC--------CCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHH-CCCEE
Confidence 012233 45589999999999999999 99999999999999999999999999999999999999 59999
Q ss_pred ecCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012678 397 HLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHIL 456 (458)
Q Consensus 397 ~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 456 (458)
.+.. ++++++|.++|+++++| +++++++++++++++ ..++..++++.+.+.+.
T Consensus 368 ~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 368 HIPRDQVTAEKLREAVLAVASD---PGVAERLAAVRQEIR----EAGGARAAADILEGILA 421 (424)
T ss_dssp ECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHH
T ss_pred EcCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCcHHHHHHHHHHHHh
Confidence 9987 78999999999999999 899999999999988 56778888887777654
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=2e-46 Score=363.68 Aligned_cols=360 Identities=17% Similarity=0.202 Sum_probs=231.2
Q ss_pred cCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEecCCCCCCCc-------cC---c-
Q 012678 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESE-------VS---T- 79 (458)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~- 79 (458)
-.+.|||+|+++|++||++|+++||++|++|||+|||++++....... .++.+..+........ .. .
T Consensus 19 ~~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (400)
T 4amg_A 19 YFQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE--AGLCAVDVSPGVNYAKLFVPDDTDVTDPMH 96 (400)
T ss_dssp --CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT--TTCEEEESSTTCCSHHHHSCCC--------
T ss_pred CCCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh--cCCeeEecCCchhHhhhccccccccccccc
Confidence 356799999999999999999999999999999999999864333222 4677777653322110 00 0
Q ss_pred ---ccHHHHHHHHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCchhhHHHHHHHcCCCeEEEecchHHHHHHHHHHHH
Q 012678 80 ---ENAISLLTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQI 156 (458)
Q Consensus 80 ---~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 156 (458)
.........+.......+.++++.+.. ++||+||+|.+.+++..+|+.+|||++.+...+...........
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~~- 170 (400)
T 4amg_A 97 SEGLGEGFFAEMFARVSAVAVDGALRTARS-----WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGALI- 170 (400)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHHH-
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhhHH-
Confidence 000111111112222223333333333 68999999999999999999999999987665432211111000
Q ss_pred HHHhcCCCccCCCCccccCCCCCCCCCCCCCcccCCCchHHHHHHHHHhhc-cCccEEEEcChhhhhHHHHHHhhhcCCC
Q 012678 157 LLEKGYLAEQDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKT-KACSGLIWNSFEDLEQTELTRLHKDFPI 235 (458)
Q Consensus 157 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~s~~~le~~~~~~~~~~~~~ 235 (458)
. +...+.+.+..-.. ......+.......... .+.....
T Consensus 171 --~----------------------------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 210 (400)
T 4amg_A 171 --R----------------------------------RAMSKDYERHGVTGEPTGSVRLTTTPPSVEAL----LPEDRRS 210 (400)
T ss_dssp --H----------------------------------HHTHHHHHHTTCCCCCSCEEEEECCCHHHHHT----SCGGGCC
T ss_pred --H----------------------------------HHHHHHHHHhCCCcccccchhhcccCchhhcc----CcccccC
Confidence 0 00000000000000 11112222222211110 0000001
Q ss_pred C-ccccCCccccccccCCCcccCccccchhhccCCCCcEEEEEcCccccCC--HHHHHHHHHHHHhCCCceEEEEcCCCC
Q 012678 236 P-MFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVN--VTEFLEIAWGLANSRVPFLWVVRPGLV 312 (458)
Q Consensus 236 p-v~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~--~~~~~~~~~al~~~~~~~i~~~~~~~~ 312 (458)
+ ...+.+.... ....+.+|++..+++++||||+||..... ...+..+++++++.+.+++|..++...
T Consensus 211 ~~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~ 280 (400)
T 4amg_A 211 PGAWPMRYVPYN----------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDL 280 (400)
T ss_dssp TTCEECCCCCCC----------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCC
T ss_pred CcccCccccccc----------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccc
Confidence 1 2222221111 12235678888889999999999987633 356788899999999999999876542
Q ss_pred CCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHHHH
Q 012678 313 PGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVW 392 (458)
Q Consensus 313 ~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~ 392 (458)
.. ...+|+++ ++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+++||+.||+++++ +
T Consensus 281 ~~---~~~~~~~v--------~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~-~ 346 (400)
T 4amg_A 281 AL---LGELPANV--------RVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTG-L 346 (400)
T ss_dssp CC---CCCCCTTE--------EEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHH-H
T ss_pred cc---cccCCCCE--------EEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHH-C
Confidence 21 33456655 89999999999999999 99999999999999999999999999999999999999 5
Q ss_pred hcceecCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 012678 393 RVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVD 453 (458)
Q Consensus 393 G~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~ 453 (458)
|+|+.++. +++.+ +|+++|+| ++||++|++++++++ ...+..++++.+.+
T Consensus 347 G~g~~l~~~~~~~~----al~~lL~d---~~~r~~a~~l~~~~~----~~~~~~~~a~~le~ 397 (400)
T 4amg_A 347 GIGFDAEAGSLGAE----QCRRLLDD---AGLREAALRVRQEMS----EMPPPAETAAXLVA 397 (400)
T ss_dssp TSEEECCTTTCSHH----HHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHH
T ss_pred CCEEEcCCCCchHH----HHHHHHcC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHHH
Confidence 99999987 67665 56788999 899999999999998 44566666655544
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=9.6e-44 Score=346.05 Aligned_cols=376 Identities=13% Similarity=0.080 Sum_probs=248.5
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEecCCCCCCCccC-cccHHHHHHHHHHhc
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEVS-TENAISLLTVLNDKC 93 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 93 (458)
|||+|++.++.||++|+++||++|++|||+|+|++++........ .|++++.++....+.... .......+ ...+
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-~g~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~ 76 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE-VGVPHVPVGPSARAPIQRAKPLTAEDV---RRFT 76 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-TTCCEEECCC-------CCSCCCHHHH---HHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH-cCCeeeeCCCCHHHHhhcccccchHHH---HHHH
Confidence 799999999999999999999999999999999999743222222 478899888543211110 11111111 1112
Q ss_pred ChhHHHHHHHHhhCCCCCCCeeEEEecC-chhh--HHHHHHHcCCCeEEEecchHHHHHHHHHHHHHHHhcCCCccCCCC
Q 012678 94 VVPFQDCLAKLISNGDQEEPVTCLITDA-IWHF--AQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGYLAEQDSQL 170 (458)
Q Consensus 94 ~~~l~~~l~~l~~~~~~~~~pDlvI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 170 (458)
...+.+.++++.+. . .+||+||+|. +..+ +..+|+.+|||++.+.+.+.... ..+.|.....
T Consensus 77 ~~~~~~~~~~l~~~-~--~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~-----------~~~~p~~~~~- 141 (415)
T 1iir_A 77 TEAIATQFDEIPAA-A--EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP-----------SPYYPPPPLG- 141 (415)
T ss_dssp HHHHHHHHHHHHHH-T--TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC-----------CSSSCCCC---
T ss_pred HHHHHHHHHHHHHH-h--cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC-----------CcccCCccCC-
Confidence 22233445555431 1 6899999998 6788 89999999999999987753210 0111110000
Q ss_pred ccccCCCCCCCCCCCCCcccCCCch----HHHHHHHHHhh------------ccCccEEEEcChhhhhH-HHHHHhhhcC
Q 012678 171 EKPVTELPPLRVKDIPIIVTHDTRN----FHQLISAVVSK------------TKACSGLIWNSFEDLEQ-TELTRLHKDF 233 (458)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~------------~~~~~~~l~~s~~~le~-~~~~~~~~~~ 233 (458)
..+++ ......+.... .... +...+....+. .... ..+.++++++++ + +.++
T Consensus 142 -~~~~~--~~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-----~~~~ 210 (415)
T 1iir_A 142 -EPSTQ--DTIDIPAQWER--NNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ-----PTDL 210 (415)
T ss_dssp ----------CHHHHHHHH--HHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC-----CCSS
T ss_pred -ccccc--hHHHHHHHHHH--HHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC-----cccC
Confidence 00000 00000000000 0000 00011111111 1122 568889888876 3 2222
Q ss_pred CCCccccCCccccccccCCCcccCccccchhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCC
Q 012678 234 PIPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVP 313 (458)
Q Consensus 234 ~~pv~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 313 (458)
++++|||+..... .+.+.++.+|++. ++++|||++||.. ...+.+..+++++++.+.+++|+++.....
T Consensus 211 --~~~~vG~~~~~~~------~~~~~~~~~~l~~--~~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~~ 279 (415)
T 1iir_A 211 --DAVQTGAWILPDE------RPLSPELAAFLDA--GPPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWADLV 279 (415)
T ss_dssp --CCEECCCCCCCCC------CCCCHHHHHHHHT--SSCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTCC
T ss_pred --CeEeeCCCccCcc------cCCCHHHHHHHhh--CCCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 6899999886532 1223447889986 4589999999987 567778889999999999999988754311
Q ss_pred CCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHh
Q 012678 314 GVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWR 393 (458)
Q Consensus 314 ~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G 393 (458)
...+++++ ++++|+||.++|+++++ ||||||+||++||+++|||+|++|..+||+.||+++++ +|
T Consensus 280 ----~~~~~~~v--------~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g 344 (415)
T 1iir_A 280 ----LPDDGADC--------FAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAE-LG 344 (415)
T ss_dssp ----CSSCGGGE--------EECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HT
T ss_pred ----ccCCCCCE--------EEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHH-CC
Confidence 12244444 88999999999988888 99999999999999999999999999999999999999 59
Q ss_pred cceecCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHH
Q 012678 394 VGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDH 454 (458)
Q Consensus 394 ~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~ 454 (458)
+|+.++. ++++++|.++|+++ +| +++++++++++++++ ..++..++++.+.+.
T Consensus 345 ~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~ 398 (415)
T 1iir_A 345 VGVAHDGPIPTFDSLSAALATA-LT---PETHARATAVAGTIR----TDGAAVAARLLLDAV 398 (415)
T ss_dssp SEEECSSSSCCHHHHHHHHHHH-TS---HHHHHHHHHHHHHSC----SCHHHHHHHHHHHHH
T ss_pred CcccCCcCCCCHHHHHHHHHHH-cC---HHHHHHHHHHHHHHh----hcChHHHHHHHHHHH
Confidence 9999987 78999999999999 88 899999999998876 444555555555443
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.8e-42 Score=337.35 Aligned_cols=370 Identities=12% Similarity=0.046 Sum_probs=249.2
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEecCCCCCCCcc--CcccHHHHHHHHHHh
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEV--STENAISLLTVLNDK 92 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 92 (458)
|||+|++.++.||++|+++||++|+++||+|+|++++........ .|++++.++........ ........+..+
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 76 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE-VGVPHVPVGLPQHMMLQEGMPPPPPEEEQRL--- 76 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-HTCCEEECSCCGGGCCCTTSCCCCHHHHHHH---
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-cCCeeeecCCCHHHHHhhccccchhHHHHHH---
Confidence 799999999999999999999999999999999998642222221 47888888754221110 001111111111
Q ss_pred cChhHHHHHHHHhhCCCCCCCeeEEEecC-chhh--HHHHHHHcCCCeEEEecchHHHHHHHHHHHHHHHhcCCCccCCC
Q 012678 93 CVVPFQDCLAKLISNGDQEEPVTCLITDA-IWHF--AQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGYLAEQDSQ 169 (458)
Q Consensus 93 ~~~~l~~~l~~l~~~~~~~~~pDlvI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 169 (458)
....+...++.+... . .+||+||+|. +.++ +..+|+.+|||++.+.+.+.... ..+.|. .
T Consensus 77 ~~~~~~~~~~~l~~~-~--~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~-----------~~~~p~-~-- 139 (416)
T 1rrv_A 77 AAMTVEMQFDAVPGA-A--EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA-----------SPHLPP-A-- 139 (416)
T ss_dssp HHHHHHHHHHHHHHH-T--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC-----------CSSSCC-C--
T ss_pred HHHHHHHHHHHHHHH-h--cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC-----------CcccCC-C--
Confidence 112223344444421 1 6899999997 4577 88999999999999887743210 011110 0
Q ss_pred CccccCCCCCCCCCCCCCccc-C-CCch----HHHHHHHHHh------------hccCccEEEEcChhhhhHHHHHHhhh
Q 012678 170 LEKPVTELPPLRVKDIPIIVT-H-DTRN----FHQLISAVVS------------KTKACSGLIWNSFEDLEQTELTRLHK 231 (458)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~----~~~~~~~~~~------------~~~~~~~~l~~s~~~le~~~~~~~~~ 231 (458)
. +++ +....+..... . .... +...+..+.+ ..... .++.++.++++++ +.
T Consensus 140 ~-----~~~-~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~-----~~ 207 (416)
T 1rrv_A 140 Y-----DEP-TTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL-----QP 207 (416)
T ss_dssp B-----CSC-CCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC-----CS
T ss_pred C-----CCC-CCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC-----CC
Confidence 0 000 00000000000 0 0000 0000111111 11222 5788998888763 12
Q ss_pred cCCCCccccCCccccccccCCCcccCccccchhhccCCCCcEEEEEcCcccc-CCHHHHHHHHHHHHhCCCceEEEEcCC
Q 012678 232 DFPIPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVV-VNVTEFLEIAWGLANSRVPFLWVVRPG 310 (458)
Q Consensus 232 ~~~~pv~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~ 310 (458)
++ ++++|||+..... .+.+.++.+|++. ++++|||++||... ...+.+..+++++++.+.+++|+++..
T Consensus 208 ~~--~~~~vG~~~~~~~------~~~~~~~~~~l~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~ 277 (416)
T 1rrv_A 208 DV--DAVQTGAWLLSDE------RPLPPELEAFLAA--GSPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWT 277 (416)
T ss_dssp SC--CCEECCCCCCCCC------CCCCHHHHHHHHS--SSCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTT
T ss_pred CC--CeeeECCCccCcc------CCCCHHHHHHHhc--CCCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 22 6899999886532 1223447889976 35899999999864 456668889999999999999998765
Q ss_pred CCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHH
Q 012678 311 LVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSH 390 (458)
Q Consensus 311 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~ 390 (458)
... ...++ +|+.+++|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++
T Consensus 278 ~~~----~~~~~--------~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~ 343 (416)
T 1rrv_A 278 ELV----LPDDR--------DDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAA 343 (416)
T ss_dssp TCC----CSCCC--------TTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHH
T ss_pred ccc----ccCCC--------CCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHH
Confidence 310 11233 44589999999999988888 99999999999999999999999999999999999999
Q ss_pred HHhcceecCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHH
Q 012678 391 VWRVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERL 451 (458)
Q Consensus 391 ~~G~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~ 451 (458)
.|+|+.++. ++++++|.++|+++ +| +++++++++++++++ ..++. ++++.+
T Consensus 344 -~g~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~----~~~~~-~~~~~i 395 (416)
T 1rrv_A 344 -LGIGVAHDGPTPTFESLSAALTTV-LA---PETRARAEAVAGMVL----TDGAA-AAADLV 395 (416)
T ss_dssp -HTSEEECSSSCCCHHHHHHHHHHH-TS---HHHHHHHHHHTTTCC----CCHHH-HHHHHH
T ss_pred -CCCccCCCCCCCCHHHHHHHHHHh-hC---HHHHHHHHHHHHHHh----hcCcH-HHHHHH
Confidence 599999987 78999999999999 88 899999999998877 34445 666655
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=2.3e-41 Score=329.69 Aligned_cols=379 Identities=15% Similarity=0.174 Sum_probs=260.8
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEecCCCCCCCccC----cccHHHHHH
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEVS----TENAISLLT 87 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 87 (458)
.+.|||+|++.++.||++|+++||++|+++||+|+|++++........ .|+.+..++...+..... ..+....+.
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA-AGATVVPYQSEIIDADAAEVFGSDDLGVRPH 96 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-TTCEEEECCCSTTTCCHHHHHHSSSSCHHHH
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-cCCEEEeccccccccccchhhccccHHHHHH
Confidence 345899999999999999999999999999999999997643322222 578899888544322110 001111111
Q ss_pred H-HHHhcChhHHHHHHHHhhCCCCCCCeeEEEec-CchhhHHHHHHHcCCCeEEEecchHHHHHHHHHHHHHHHhcCCCc
Q 012678 88 V-LNDKCVVPFQDCLAKLISNGDQEEPVTCLITD-AIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGYLAE 165 (458)
Q Consensus 88 ~-~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~ 165 (458)
. +.......+.++ .++++. ++||+||+| ....++..+|+.+|||++.+.+.......... .+....... ..
T Consensus 97 ~~~~~~~~~~~~~l-~~~l~~----~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~~~-~~ 169 (415)
T 3rsc_A 97 LMYLRENVSVLRAT-AEALDG----DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSF-SQDMVTLAG-TI 169 (415)
T ss_dssp HHHHHHHHHHHHHH-HHHHSS----SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCH-HHHHHHHHT-CC
T ss_pred HHHHHHHHHHHHHH-HHHHhc----cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccc-ccccccccc-cC
Confidence 1 222222222333 333333 789999999 77788999999999999998755321000000 000000000 00
Q ss_pred cCCCCccccCCCCCCCCCCCCCcccCCCchHHHHHHHHHh----------hccCc-cEEEEcChhhhhHHHHHHhhhcCC
Q 012678 166 QDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVS----------KTKAC-SGLIWNSFEDLEQTELTRLHKDFP 234 (458)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-~~~l~~s~~~le~~~~~~~~~~~~ 234 (458)
. + .......+.+..... ..... +..+....+.++++ ...++
T Consensus 170 -~-------p---------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~ 221 (415)
T 3rsc_A 170 -D-------P---------------LDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA-----GDTFD 221 (415)
T ss_dssp -C-------G---------------GGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT-----GGGCC
T ss_pred -C-------h---------------hhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC-----cccCC
Confidence 0 0 000111111111111 11112 56666666666643 34445
Q ss_pred CCccccCCccccccccCCCcccCccccchhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCC
Q 012678 235 IPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPG 314 (458)
Q Consensus 235 ~pv~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 314 (458)
.++.++||....... ..+|....+++++||+++||......+.+..+++++++.+.+++|.++.+...
T Consensus 222 ~~~~~vGp~~~~~~~-----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~- 289 (415)
T 3rsc_A 222 DRFVFVGPCFDDRRF-----------LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVDP- 289 (415)
T ss_dssp TTEEECCCCCCCCGG-----------GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSCG-
T ss_pred CceEEeCCCCCCccc-----------CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCCh-
Confidence 568999987754221 23455545678999999999987667778889999999888999988754210
Q ss_pred CcccCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhc
Q 012678 315 VEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRV 394 (458)
Q Consensus 315 ~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~ 394 (458)
+.+..++ +|+++.+|+|+.++|+++++ +|||||+||+.||+++|+|+|++|...||+.||+++++. |+
T Consensus 290 -~~l~~~~--------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~-g~ 357 (415)
T 3rsc_A 290 -AALGDLP--------PNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL-GL 357 (415)
T ss_dssp -GGGCCCC--------TTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHH-TC
T ss_pred -HHhcCCC--------CcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHc-CC
Confidence 1122334 44589999999999999999 999999999999999999999999999999999999994 99
Q ss_pred ceecCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012678 395 GLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 395 G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (458)
|+.+.. ++++++|.++|.++++| ++++++++++++++. ..++..++++.+.+.+.+
T Consensus 358 g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 358 GAVLPGEKADGDTLLAAVGAVAAD---PALLARVEAMRGHVR----RAGGAARAADAVEAYLAR 414 (415)
T ss_dssp EEECCGGGCCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHH----HSCHHHHHHHHHHHHHHH
T ss_pred EEEcccCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhc
Confidence 999988 78999999999999999 899999999999988 578888888888877654
No 11
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.2e-40 Score=326.68 Aligned_cols=374 Identities=13% Similarity=0.104 Sum_probs=245.4
Q ss_pred cCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEecCCCCCC-Cc-------------
Q 012678 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWE-SE------------- 76 (458)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------- 76 (458)
..+.|||+|++.++.||++|+++||++|+++||+|+|++++........ .|++++.++..... +.
T Consensus 17 ~~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~-~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 95 (441)
T 2yjn_A 17 RGSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA-AGLTAVPVGTDVDLVDFMTHAGHDIIDYVR 95 (441)
T ss_dssp --CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT-TTCCEEECSCCCCHHHHHHHTTHHHHHHHT
T ss_pred cCCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh-CCCceeecCCccchHHHhhhhhcccccccc
Confidence 3456899999999999999999999999999999999998643222222 57899988854310 00
Q ss_pred --c-----Cc-ccHH---HHHHHHHHhcC-----h-hHHHHHHHHhhCCCCCCCeeEEEecCchhhHHHHHHHcCCCeEE
Q 012678 77 --V-----ST-ENAI---SLLTVLNDKCV-----V-PFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIV 139 (458)
Q Consensus 77 --~-----~~-~~~~---~~~~~~~~~~~-----~-~l~~~l~~l~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~ 139 (458)
. .. .... ..+..+...+. . .+.++++.+.+ ++||+||+|.+..++..+|+.+|||++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~pDlVv~d~~~~~~~~aA~~lgiP~v~ 170 (441)
T 2yjn_A 96 SLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK-----WRPDLVIWEPLTFAAPIAAAVTGTPHAR 170 (441)
T ss_dssp TCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH-----HCCSEEEECTTCTHHHHHHHHHTCCEEE
T ss_pred cccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh-----cCCCEEEecCcchhHHHHHHHcCCCEEE
Confidence 0 00 0111 11111222111 2 44445444443 6899999999878899999999999999
Q ss_pred EecchHHHHHHHHHHHHHHHhcCCCccCCCCccccCCCCCCCCCCCCCcccCCCchHHHHHHHHHhhccC---------c
Q 012678 140 LRTSSISSFLAFSAFQILLEKGYLAEQDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKA---------C 210 (458)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 210 (458)
+...+........ +.....++.+.. .....+.+.+....+.... .
T Consensus 171 ~~~~~~~~~~~~~--~~~~~~~~~~~~------------------------~~~~~~~~~l~~~~~~~g~~~~~~~~~~~ 224 (441)
T 2yjn_A 171 LLWGPDITTRARQ--NFLGLLPDQPEE------------------------HREDPLAEWLTWTLEKYGGPAFDEEVVVG 224 (441)
T ss_dssp ECSSCCHHHHHHH--HHHHHGGGSCTT------------------------TCCCHHHHHHHHHHHHTTCCCCCGGGTSC
T ss_pred EecCCCcchhhhh--hhhhhccccccc------------------------cccchHHHHHHHHHHHcCCCCCCccccCC
Confidence 8665433211110 111111111100 0111122333332222111 2
Q ss_pred cEEEEcChhhhhHHHHHHhhhcCC-CCccccCCccccccccCCCcccCccccchhhccCCCCcEEEEEcCccccC---CH
Q 012678 211 SGLIWNSFEDLEQTELTRLHKDFP-IPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVV---NV 286 (458)
Q Consensus 211 ~~~l~~s~~~le~~~~~~~~~~~~-~pv~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~---~~ 286 (458)
+..+..+.+.++++ .+++ .++.++++ . ...++.+|++..+++++|||++||.... ..
T Consensus 225 ~~~l~~~~~~~~~~------~~~~~~~~~~~~~---~----------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~ 285 (441)
T 2yjn_A 225 QWTIDPAPAAIRLD------TGLKTVGMRYVDY---N----------GPSVVPEWLHDEPERRRVCLTLGISSRENSIGQ 285 (441)
T ss_dssp SSEEECSCGGGSCC------CCCCEEECCCCCC---C----------SSCCCCGGGSSCCSSCEEEEEC----------C
T ss_pred CeEEEecCccccCC------CCCCCCceeeeCC---C----------CCcccchHhhcCCCCCEEEEECCCCcccccChH
Confidence 33444444444321 1111 11222211 0 1122568888666789999999998763 34
Q ss_pred HHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHHHH
Q 012678 287 TEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESI 366 (458)
Q Consensus 287 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal 366 (458)
+.+..+++++++.+.+++|++++..... +..++ +|+++++|+||.++|+++++ ||||||+||++||+
T Consensus 286 ~~~~~~~~al~~~~~~~v~~~g~~~~~~---l~~~~--------~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~ 352 (441)
T 2yjn_A 286 VSIEELLGAVGDVDAEIIATFDAQQLEG---VANIP--------DNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTAA 352 (441)
T ss_dssp CSTTTTHHHHHTSSSEEEECCCTTTTSS---CSSCC--------SSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEECCcchhh---hccCC--------CCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHH
Confidence 5577788999988999999887543111 22233 45589999999999999998 99999999999999
Q ss_pred hhCCcccccccccchhhHHHHHHHHHhcceecCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChH
Q 012678 367 CEGVPMICQPCFGDQLVNARYVSHVWRVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSY 445 (458)
Q Consensus 367 ~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~ 445 (458)
++|||+|++|...||+.||+++++ .|+|+.++. ++++++|.++|.++++| ++++++++++++++. ...+..
T Consensus 353 ~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~ 424 (441)
T 2yjn_A 353 IHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPVPELTPDQLRESVKRVLDD---PAHRAGAARMRDDML----AEPSPA 424 (441)
T ss_dssp HTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTTCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCCHH
T ss_pred HhCCCEEEeCCcccHHHHHHHHHH-cCCEEEcccccCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHH----cCCCHH
Confidence 999999999999999999999999 599999987 78999999999999999 899999999999988 577788
Q ss_pred HHHHHHHHHHh
Q 012678 446 QSLERLVDHIL 456 (458)
Q Consensus 446 ~~~~~~~~~~~ 456 (458)
++++.+.+.+.
T Consensus 425 ~~~~~i~~~~~ 435 (441)
T 2yjn_A 425 EVVGICEELAA 435 (441)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88887776654
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=2.7e-40 Score=320.87 Aligned_cols=375 Identities=19% Similarity=0.233 Sum_probs=257.7
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEecCCCCCCCc----cCcccHHHHHHH-H
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESE----VSTENAISLLTV-L 89 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~ 89 (458)
|||+|++.++.||++|++.||++|+++||+|+|++++........ .|+.+..++...+... ....+....+.. +
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA-AGAEVVLYKSEFDTFHVPEVVKQEDAETQLHLVY 83 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH-TTCEEEECCCGGGTSSSSSSSCCTTHHHHHHHHH
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH-cCCEEEecccccccccccccccccchHHHHHHHH
Confidence 499999999999999999999999999999999998532222222 5788888875432211 111222233322 2
Q ss_pred HHhcChhHHHHHHHHhhCCCCCCCeeEEEec-CchhhHHHHHHHcCCCeEEEecchHHHHHHHHHHHHHHHhcCCCccCC
Q 012678 90 NDKCVVPFQDCLAKLISNGDQEEPVTCLITD-AIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGYLAEQDS 168 (458)
Q Consensus 90 ~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 168 (458)
.......+.++.+.+ +. ++||+||+| .+..++..+|+.+|||++.+.+.......... .+....... .. .
T Consensus 84 ~~~~~~~~~~l~~~l-~~----~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~~~-~~-~- 154 (402)
T 3ia7_A 84 VRENVAILRAAEEAL-GD----NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSL-FKELWKSNG-QR-H- 154 (402)
T ss_dssp HHHHHHHHHHHHHHH-TT----CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCH-HHHHHHHHT-CC-C-
T ss_pred HHHHHHHHHHHHHHH-hc----cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccc-ccccccccc-cc-C-
Confidence 232223333333333 33 789999999 77788999999999999998754321100000 000000000 00 0
Q ss_pred CCccccCCCCCCCCCCCCCcccCCCchHHHHHHHHHh----------hccCc-cEEEEcChhhhhHHHHHHhhhcCCCCc
Q 012678 169 QLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVS----------KTKAC-SGLIWNSFEDLEQTELTRLHKDFPIPM 237 (458)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-~~~l~~s~~~le~~~~~~~~~~~~~pv 237 (458)
+ .....+.+.+..... ..... +..+....+++++. ...++.++
T Consensus 155 ------~---------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~ 208 (402)
T 3ia7_A 155 ------P---------------ADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----AETFDERF 208 (402)
T ss_dssp ------G---------------GGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----GGGCCTTE
T ss_pred ------h---------------hhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----cccCCCCe
Confidence 0 000111111111111 11112 55666666666543 34445568
Q ss_pred cccCCccccccccCCCcccCccccchhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcc
Q 012678 238 FPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEW 317 (458)
Q Consensus 238 ~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~ 317 (458)
.++||....... ..+|....+++++||+++||......+.+..++++++..+.+++|.++.+... +.
T Consensus 209 ~~vGp~~~~~~~-----------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~ 275 (402)
T 3ia7_A 209 AFVGPTLTGRDG-----------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDP--AV 275 (402)
T ss_dssp EECCCCCCC---------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCG--GG
T ss_pred EEeCCCCCCccc-----------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCCh--hh
Confidence 999987654221 23455545678999999999987666788889999998888888888754210 11
Q ss_pred cCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHHHHhhCCccccccc-ccchhhHHHHHHHHHhcce
Q 012678 318 LEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPC-FGDQLVNARYVSHVWRVGL 396 (458)
Q Consensus 318 ~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~-~~DQ~~na~~v~~~~G~G~ 396 (458)
+..++ +|+++.+|+|+.++|+++++ +|||||+||+.||+++|+|+|++|. ..||+.||+++++ .|+|.
T Consensus 276 ~~~~~--------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~-~g~g~ 344 (402)
T 3ia7_A 276 LGPLP--------PNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIE-LGLGS 344 (402)
T ss_dssp GCSCC--------TTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHH-TTSEE
T ss_pred hCCCC--------CcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHH-cCCEE
Confidence 22233 45589999999999999999 9999999999999999999999999 9999999999999 59999
Q ss_pred ecCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012678 397 HLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHIL 456 (458)
Q Consensus 397 ~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 456 (458)
.+.. +++++.|.++|.++++| ++++++++++++++. ..++..++++.+.+.+.
T Consensus 345 ~~~~~~~~~~~l~~~~~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 345 VLRPDQLEPASIREAVERLAAD---SAVRERVRRMQRDIL----SSGGPARAADEVEAYLG 398 (402)
T ss_dssp ECCGGGCSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHH
T ss_pred EccCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHh----hCChHHHHHHHHHHHHh
Confidence 9987 78999999999999999 899999999999887 67788888888877664
No 13
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.2e-41 Score=329.77 Aligned_cols=368 Identities=14% Similarity=0.086 Sum_probs=242.2
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEecCCCCCCCc-cCcccHHHHHHHHHHhc
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESE-VSTENAISLLTVLNDKC 93 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 93 (458)
|||+|++.++.||++|+++||++|++|||+|+|++++........ .|+.+..++....... ............+....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~-~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE-VGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVV 79 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH-TTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-cCCceeecCCCHHHHhccccCCHHHHHHHHHHHH
Confidence 899999999999999999999999999999999998632222222 5788888874322110 00000000000111111
Q ss_pred ChhHHHHHHHHhhCCCCCCCeeEEEecCchhhH---HHHHHHcCCCeEEEecchHHHHHHH-------HH--HHHHHHhc
Q 012678 94 VVPFQDCLAKLISNGDQEEPVTCLITDAIWHFA---QTVADTLRLPRIVLRTSSISSFLAF-------SA--FQILLEKG 161 (458)
Q Consensus 94 ~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~-------~~--~~~~~~~~ 161 (458)
...+ +.+.++. .+||+||+|.....+ ..+|+.+|||++.+...+....+.. .. ........
T Consensus 80 ~~~~-~~l~~~~------~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (404)
T 3h4t_A 80 AEWF-DKVPAAI------EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGADRLFGDA 152 (404)
T ss_dssp HHHH-HHHHHHH------TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHHHh------cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHHHHHHhHHH
Confidence 1111 1222233 369999998665434 7899999999998887764211000 00 00000000
Q ss_pred CCCccCCCCccccCCCCCCCCCCCCCcccCCCchHHHHHHHHHhhccCccEEEEcChhhhhHHHHHHhhhcCCCCccccC
Q 012678 162 YLAEQDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDFPIPMFPIG 241 (458)
Q Consensus 162 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~pv~~vG 241 (458)
. + .. ..--+++ ....... .. ..+..+.+..+.+.+. +.++..++++|
T Consensus 153 ~----~-~~-~~~lgl~-------------~~~~~~~-------~~-~~~~~l~~~~~~l~p~------~~~~~~~~~~G 199 (404)
T 3h4t_A 153 V----N-SH-RASIGLP-------------PVEHLYD-------YG-YTDQPWLAADPVLSPL------RPTDLGTVQTG 199 (404)
T ss_dssp H----H-HH-HHHTTCC-------------CCCCHHH-------HH-HCSSCEECSCTTTSCC------CTTCCSCCBCC
T ss_pred H----H-HH-HHHcCCC-------------CCcchhh-------cc-ccCCeEEeeCcceeCC------CCCCCCeEEeC
Confidence 0 0 00 0000000 0000000 00 0122345666666442 12334588899
Q ss_pred CccccccccCCCcccCccccchhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCC
Q 012678 242 PFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPL 321 (458)
Q Consensus 242 pl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l 321 (458)
++..+.. ..++ +++.+|++. ++++|||++||... +.+.+..+++++++.+.++||+++..... ...+
T Consensus 200 ~~~~~~~----~~~~--~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~----~~~~ 266 (404)
T 3h4t_A 200 AWILPDQ----RPLS--AELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLG----RIDE 266 (404)
T ss_dssp CCCCCCC----CCCC--HHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCC----CSSC
T ss_pred ccccCCC----CCCC--HHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcccc----cccC
Confidence 7765432 1233 347788875 57899999999987 67788899999999999999998764311 1112
Q ss_pred chhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCC-
Q 012678 322 PKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLER- 400 (458)
Q Consensus 322 ~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~- 400 (458)
+ +|+.+++|+||.++|+++++ +|||||+||+.||+++|+|+|++|+.+||+.||+++++ .|+|+.+..
T Consensus 267 ~--------~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~-~G~g~~l~~~ 335 (404)
T 3h4t_A 267 G--------DDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD-LGVGVAHDGP 335 (404)
T ss_dssp C--------TTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECSSS
T ss_pred C--------CCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-CCCEeccCcC
Confidence 3 45589999999999999998 99999999999999999999999999999999999999 599999987
Q ss_pred cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012678 401 KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHIL 456 (458)
Q Consensus 401 ~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 456 (458)
++++++|.++|+++++ ++|+++++++++.+. . .+..++++.+.+.+.
T Consensus 336 ~~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~----~-~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 336 TPTVESLSAALATALT----PGIRARAAAVAGTIR----T-DGTTVAAKLLLEAIS 382 (404)
T ss_dssp SCCHHHHHHHHHHHTS----HHHHHHHHHHHTTCC----C-CHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHh----h-hHHHHHHHHHHHHHh
Confidence 7899999999999997 379999999998886 4 566667766666553
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=4e-39 Score=315.36 Aligned_cols=375 Identities=15% Similarity=0.176 Sum_probs=249.8
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEecCCCCCCCccC----cccHHHHHHHH
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEVS----TENAISLLTVL 89 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 89 (458)
.|||+|++.++.||++|++.||++|+++||+|++++++........ .|++++.++...+..... ..+....+..+
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA-TGPRPVLYHSTLPGPDADPEAWGSTLLDNVEPF 85 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT-TSCEEEECCCCSCCTTSCGGGGCSSHHHHHHHH
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh-CCCEEEEcCCcCccccccccccchhhHHHHHHH
Confidence 4799999999999999999999999999999999998643222222 578888888654322111 11222223222
Q ss_pred HHhcChhHHHHHHHHhhCCCCCCCeeEEEecCchhhHHHHHHHcCCCeEEEecchHHHHHHHHHHHHHHHhcCCCccCCC
Q 012678 90 NDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGYLAEQDSQ 169 (458)
Q Consensus 90 ~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 169 (458)
...+...+.. +.++++. ++||+||+|.+..++..+|+.+|||+|.+.+.+............+....
T Consensus 86 ~~~~~~~~~~-l~~~l~~----~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~-------- 152 (430)
T 2iyf_A 86 LNDAIQALPQ-LADAYAD----DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWRE-------- 152 (430)
T ss_dssp HHHHHHHHHH-HHHHHTT----SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHHH--------
T ss_pred HHHHHHHHHH-HHHHhhc----cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhhh--------
Confidence 2222222233 3333333 68999999987778899999999999998865431000000000000000
Q ss_pred CccccCCCCCCCCCCCCCcccCCCchHHHHHHHHH----------hhccCccEEEEcChhhhhHHHHHHhhhcCCCC-cc
Q 012678 170 LEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVV----------SKTKACSGLIWNSFEDLEQTELTRLHKDFPIP-MF 238 (458)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~p-v~ 238 (458)
+.+. + . ...+.+.+.... +....++.++.++.+.+++. ...++.+ ++
T Consensus 153 ----~~~~--------~----~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~v~ 210 (430)
T 2iyf_A 153 ----PRQT--------E----R-GRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH-----ADRVDEDVYT 210 (430)
T ss_dssp ----HHHS--------H----H-HHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-----GGGSCTTTEE
T ss_pred ----hccc--------h----H-HHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-----cccCCCccEE
Confidence 0000 0 0 000000111111 11124577889998888764 1334556 89
Q ss_pred ccCCccccccccCCCcccCccccchhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhC-CCceEEEEcCCCCCCCcc
Q 012678 239 PIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANS-RVPFLWVVRPGLVPGVEW 317 (458)
Q Consensus 239 ~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~ 317 (458)
+|||....... ..+|.+..+++++||+++||......+.+..+++++++. +.+++|.++.+... +.
T Consensus 211 ~vG~~~~~~~~-----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~--~~ 277 (430)
T 2iyf_A 211 FVGACQGDRAE-----------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP--AE 277 (430)
T ss_dssp ECCCCC----------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CG--GG
T ss_pred EeCCcCCCCCC-----------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh--HH
Confidence 99986542110 134555445688999999999855667788899999885 77888888754210 00
Q ss_pred cCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhccee
Q 012678 318 LEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLH 397 (458)
Q Consensus 318 ~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~ 397 (458)
+..+ ++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|..+||..||+++++ .|+|+.
T Consensus 278 l~~~--------~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~-~g~g~~ 346 (430)
T 2iyf_A 278 LGEL--------PDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG-LGVARK 346 (430)
T ss_dssp GCSC--------CTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEEE
T ss_pred hccC--------CCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-cCCEEE
Confidence 1122 345589999999999999999 99999999999999999999999999999999999999 599999
Q ss_pred cCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 012678 398 LER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHI 455 (458)
Q Consensus 398 l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 455 (458)
+.. ++++++|.++|.++++| +++++++.++++++.+ .++..+.++.+.+.+
T Consensus 347 ~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 398 (430)
T 2iyf_A 347 LATEEATADLLRETALALVDD---PEVARRLRRIQAEMAQ----EGGTRRAADLIEAEL 398 (430)
T ss_dssp CCCC-CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH----HCHHHHHHHHHHTTS
T ss_pred cCCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHh
Confidence 987 78999999999999999 8899999999888873 356666666665543
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.5e-39 Score=313.53 Aligned_cols=353 Identities=13% Similarity=0.098 Sum_probs=247.7
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEecCCCCCCC------------ccCcccH
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWES------------EVSTENA 82 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 82 (458)
|||++++.++.||++|++.||++|+++||+|++++++....... ..++.++.++.....+ .......
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVT-GVGLPAVATTDLPIRHFITTDREGRPEAIPSDPVA 79 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH-HTTCCEEESCSSCHHHHHHBCTTSCBCCCCCSHHH
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHH-hCCCEEEEeCCcchHHHHhhhcccCccccCcchHH
Confidence 79999999999999999999999999999999999863221111 1468888877532100 0000011
Q ss_pred HHHH-HH-HHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCchhhHHHHHHHcCCCeEEEecchHHHHHHHHHHHHHHHh
Q 012678 83 ISLL-TV-LNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEK 160 (458)
Q Consensus 83 ~~~~-~~-~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 160 (458)
...+ .. +...+...+.++.+.+.+ ++||+||+|.+..++..+|+.+|||++.+...+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~------------- 141 (384)
T 2p6p_A 80 QARFTGRWFARMAASSLPRMLDFSRA-----WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA------------- 141 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC-------------
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhc-----cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc-------------
Confidence 1111 11 111222223334333333 689999999888888899999999999876432100
Q ss_pred cCCCccCCCCccccCCCCCCCCCCCCCcccCCCchHHHHHHHHHhhc-----cCccEEEEcChhhhhHHHHHHhhhcCC-
Q 012678 161 GYLAEQDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKT-----KACSGLIWNSFEDLEQTELTRLHKDFP- 234 (458)
Q Consensus 161 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~s~~~le~~~~~~~~~~~~- 234 (458)
.. ....+...+....... ..++.++.++.+.++++. .++
T Consensus 142 -------~~----------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~------~~~~ 186 (384)
T 2p6p_A 142 -------DG----------------------IHPGADAELRPELSELGLERLPAPDLFIDICPPSLRPAN------AAPA 186 (384)
T ss_dssp -------TT----------------------THHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT------SCCC
T ss_pred -------ch----------------------hhHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC------CCCC
Confidence 00 0000111111111111 115677888888776531 111
Q ss_pred CCccccCCccccccccCCCcccCccccchhhccCCCCcEEEEEcCccccC-----CHHHHHHHHHHHHhCCCceEEEEcC
Q 012678 235 IPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVV-----NVTEFLEIAWGLANSRVPFLWVVRP 309 (458)
Q Consensus 235 ~pv~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~-----~~~~~~~~~~al~~~~~~~i~~~~~ 309 (458)
.++.+++ .. . ..++.+|++..+++++||+++||.... +.+.+..+++++++.+.+++|++++
T Consensus 187 ~~~~~~~-~~---~---------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~ 253 (384)
T 2p6p_A 187 RMMRHVA-TS---R---------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPD 253 (384)
T ss_dssp EECCCCC-CC---C---------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCH
T ss_pred CceEecC-CC---C---------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 2244442 11 0 122567887655678999999998864 4567888999999989999998764
Q ss_pred CCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHH
Q 012678 310 GLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVS 389 (458)
Q Consensus 310 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~ 389 (458)
.. .+.+ ...++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|..+||+.||++++
T Consensus 254 ~~----------~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~ 319 (384)
T 2p6p_A 254 TV----------AEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVA 319 (384)
T ss_dssp HH----------HHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHH
T ss_pred CC----------HHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHH
Confidence 21 1222 134678899 99999999999988 9999999999999999999999999999999999999
Q ss_pred HHHhcceecCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012678 390 HVWRVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHIL 456 (458)
Q Consensus 390 ~~~G~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 456 (458)
+ .|+|+.++. ++++++|.++|.++++| +++++++++++++++ ...+..++++.+.+.+-
T Consensus 320 ~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 320 D-YGAAIALLPGEDSTEAIADSCQELQAK---DTYARRAQDLSREIS----GMPLPATVVTALEQLAH 379 (384)
T ss_dssp H-HTSEEECCTTCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHHHHH
T ss_pred H-CCCeEecCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hCCCHHHHHHHHHHHhh
Confidence 9 599999987 78999999999999999 899999999999998 67788888887776653
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=7.4e-38 Score=303.08 Aligned_cols=359 Identities=15% Similarity=0.162 Sum_probs=236.4
Q ss_pred ccccccCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEecCCCCCC-----------
Q 012678 6 ESNVQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWE----------- 74 (458)
Q Consensus 6 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 74 (458)
...+...+.|||+|++.++.||++|++.||++|.++||+|+++++ ....... ..|+.+..++.....
T Consensus 12 ~~~~~~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 12 SSGHIEGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAA-AAGLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp -------CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHH-TTTCEEEESSTTCCHHHHHHHHHHHC
T ss_pred cccchhhhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHH-hCCCeeEecCCccCHHHHhhhcccCC
Confidence 445566677999999999999999999999999999999999998 3222222 268889888743110
Q ss_pred ----------CccCcccHHHHHHHHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCchhhHHHHHHHcCCCeEEEecch
Q 012678 75 ----------SEVSTENAISLLTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSS 144 (458)
Q Consensus 75 ----------~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~ 144 (458)
...........+... ....+.++.+.+.+ ++||+||+|...+++..+|+.+|||++.+....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~l~~-----~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~ 161 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAV---NRPLVDGTMALVDD-----YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSA 161 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHH---HGGGHHHHHHHHHH-----HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTT
T ss_pred ccccccccCChhhhHHHHHHHHHHH---HHHHHHHHHHHHHH-----cCCCEEEECchhhHHHHHHHHcCCCEEEEeccC
Confidence 001111111222222 22333333333333 689999999888889999999999999866442
Q ss_pred HHHHHHHHHHHHHHHhcCCCccCCCCccccCCCCCCCCCCCCCcccCCCchHHHHHHHHHhhccCccEEEEcChhhhhHH
Q 012678 145 ISSFLAFSAFQILLEKGYLAEQDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQT 224 (458)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~ 224 (458)
...... .... ............-.....+..+....+.+..+
T Consensus 162 ~~~~~~----~~~~----------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (398)
T 3oti_A 162 WRTRGM----HRSI----------------------------------ASFLTDLMDKHQVSLPEPVATIESFPPSLLLE 203 (398)
T ss_dssp CCCTTH----HHHH----------------------------------HTTCHHHHHHTTCCCCCCSEEECSSCGGGGTT
T ss_pred CCccch----hhHH----------------------------------HHHHHHHHHHcCCCCCCCCeEEEeCCHHHCCC
Confidence 110000 0000 00001111110000112233333333333321
Q ss_pred HHHHhhhcCCCCccccCCccccccccCCCcccCccccchhhccCCCCcEEEEEcCccccC--CHHHHHHHHHHHHhCCCc
Q 012678 225 ELTRLHKDFPIPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVV--NVTEFLEIAWGLANSRVP 302 (458)
Q Consensus 225 ~~~~~~~~~~~pv~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~--~~~~~~~~~~al~~~~~~ 302 (458)
......++.++ |. . ......+|+...+++++||+++||.... ..+.+..+++++++.+.+
T Consensus 204 -----~~~~~~~~~~~-~~--~----------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~ 265 (398)
T 3oti_A 204 -----AEPEGWFMRWV-PY--G----------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDAD 265 (398)
T ss_dssp -----SCCCSBCCCCC-CC--C----------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSE
T ss_pred -----CCCCCCCcccc-CC--C----------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCE
Confidence 00001112222 11 0 1122456776666789999999999652 566788899999998999
Q ss_pred eEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHHHHhhCCcccccccccchh
Q 012678 303 FLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQL 382 (458)
Q Consensus 303 ~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~ 382 (458)
++|+.++... +.+..+++ |+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||.
T Consensus 266 ~v~~~g~~~~---~~l~~~~~--------~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~ 332 (398)
T 3oti_A 266 FVLALGDLDI---SPLGTLPR--------NVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQF 332 (398)
T ss_dssp EEEECTTSCC---GGGCSCCT--------TEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCS
T ss_pred EEEEECCcCh---hhhccCCC--------cEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhH
Confidence 9999876431 11223444 4589999999999999999 999999999999999999999999999999
Q ss_pred hHH--HHHHHHHhcceecCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 012678 383 VNA--RYVSHVWRVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHI 455 (458)
Q Consensus 383 ~na--~~v~~~~G~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 455 (458)
.|| +++++ .|+|+.++. +.+++.|. ++++| ++++++++++++++. ...+..+.++.+.+.+
T Consensus 333 ~~a~~~~~~~-~g~g~~~~~~~~~~~~l~----~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 333 QHTAREAVSR-RGIGLVSTSDKVDADLLR----RLIGD---ESLRTAAREVREEMV----ALPTPAETVRRIVERI 396 (398)
T ss_dssp SCTTHHHHHH-HTSEEECCGGGCCHHHHH----HHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-CCCEEeeCCCCCCHHHHH----HHHcC---HHHHHHHHHHHHHHH----hCCCHHHHHHHHHHHh
Confidence 999 99999 599999987 77888887 88888 899999999999988 6777777777776654
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.5e-38 Score=306.49 Aligned_cols=359 Identities=16% Similarity=0.148 Sum_probs=221.6
Q ss_pred cccccCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEecCCCCCC---------Cc-
Q 012678 7 SNVQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWE---------SE- 76 (458)
Q Consensus 7 ~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~- 76 (458)
....+..+|||+|++.++.||++|++.|+++|.++||+|++++++........ .|+.+..++..... ..
T Consensus 8 ~~~~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~ 86 (398)
T 4fzr_A 8 SGVPRGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG-AGLPFAPTCPSLDMPEVLSWDREGNR 86 (398)
T ss_dssp -------CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH-TTCCEEEEESSCCHHHHHSBCTTSCB
T ss_pred CCCCCCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh-CCCeeEecCCccchHhhhhhhccCcc
Confidence 34455678999999999999999999999999999999999997532211111 56777777531100 00
Q ss_pred ---c-CcccHH-HHHHHHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCchhhHHHHHHHcCCCeEEEecchHHHHHHH
Q 012678 77 ---V-STENAI-SLLTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAF 151 (458)
Q Consensus 77 ---~-~~~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 151 (458)
. ...... .....+.......+.++.+.+.+ ++||+||+|...+++..+|+.+|||++.+...........
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~ 161 (398)
T 4fzr_A 87 TTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER-----WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK 161 (398)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh
Confidence 0 000111 11111112222222233333333 6899999998778899999999999998776532111000
Q ss_pred HHHHHHHHhcCCCccCCCCccccCCCCCCCCCCCCCcccCCCchHHHHHHHHHhh-----ccCccEEEEcChhhhhHHHH
Q 012678 152 SAFQILLEKGYLAEQDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSK-----TKACSGLIWNSFEDLEQTEL 226 (458)
Q Consensus 152 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~s~~~le~~~~ 226 (458)
.. ..+.+...... ....+..+....+.+....
T Consensus 162 ~~------------------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 198 (398)
T 4fzr_A 162 SA------------------------------------------GVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQP- 198 (398)
T ss_dssp HH------------------------------------------HHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC----
T ss_pred HH------------------------------------------HHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCC-
Confidence 00 00000100000 1122334454545554321
Q ss_pred HHhhhcCCCCccccCCccccccccCCCcccCccccchhhccCCCCcEEEEEcCccccC--------CHHHHHHHHHHHHh
Q 012678 227 TRLHKDFPIPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVV--------NVTEFLEIAWGLAN 298 (458)
Q Consensus 227 ~~~~~~~~~pv~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~--------~~~~~~~~~~al~~ 298 (458)
.....++.++++.. ...++.+|+...+++++||+++||.... ..+.+..+++++++
T Consensus 199 ----~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~ 262 (398)
T 4fzr_A 199 ----KPGTTKMRYVPYNG------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK 262 (398)
T ss_dssp -----CCCEECCCCCCCC------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGG
T ss_pred ----CCCCCCeeeeCCCC------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHh
Confidence 00011133332110 1122567777656789999999998752 34568889999999
Q ss_pred CCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHHHHhhCCcccccccc
Q 012678 299 SRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCF 378 (458)
Q Consensus 299 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~ 378 (458)
.+.+++|+.++... +.+..+ ++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|..
T Consensus 263 ~~~~~v~~~~~~~~---~~l~~~--------~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~ 329 (398)
T 4fzr_A 263 LGFEVVVAVSDKLA---QTLQPL--------PEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVI 329 (398)
T ss_dssp GTCEEEECCCC-----------C--------CTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred CCCEEEEEeCCcch---hhhccC--------CCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCc
Confidence 89999998876431 112223 345589999999999999999 99999999999999999999999999
Q ss_pred cchhhHHHHHHHHHhcceecCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHH
Q 012678 379 GDQLVNARYVSHVWRVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERL 451 (458)
Q Consensus 379 ~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~ 451 (458)
.||+.||+++++ .|+|+.+.. ++++++|.++|.++++| +++++++++.++++. ...+..+.++.+
T Consensus 330 ~~q~~~a~~~~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~l 395 (398)
T 4fzr_A 330 AEVWDSARLLHA-AGAGVEVPWEQAGVESVLAACARIRDD---SSYVGNARRLAAEMA----TLPTPADIVRLI 395 (398)
T ss_dssp GGGHHHHHHHHH-TTSEEECC-------CHHHHHHHHHHC---THHHHHHHHHHHHHT----TSCCHHHHHHHH
T ss_pred hhHHHHHHHHHH-cCCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHH----cCCCHHHHHHHH
Confidence 999999999999 499999987 78999999999999999 899999999999887 455555544443
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=5.3e-36 Score=289.47 Aligned_cols=355 Identities=15% Similarity=0.196 Sum_probs=233.8
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEec-CCCCC----------CCc-----c
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSI-SESLW----------ESE-----V 77 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~-~~~~~----------~~~-----~ 77 (458)
+|||+|++.++.||++|++.|+++|.++||+|++++++....... ..|+.+..+ +.... ... .
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAH-GAGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQR 79 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHH-HBTCEEEEC--------------CCSCCGGGGCT
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHH-hCCCceeeecCCccchhhhhhhcccccccccccc
Confidence 599999999999999999999999999999999998752211111 146777777 32110 000 0
Q ss_pred CcccHHHHHHHHHHhc----ChhHHHHHHHHhhCCCCCCCeeEEEecCchhhHHHHHHHcCCCeEEEecchHHHHHHHHH
Q 012678 78 STENAISLLTVLNDKC----VVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSA 153 (458)
Q Consensus 78 ~~~~~~~~~~~~~~~~----~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 153 (458)
........+......+ ...+.++.+.+.+ ++||+||+|...+.+..+|+.+|||++.+..........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~--- 151 (391)
T 3tsa_A 80 DTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA-----WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTAGP--- 151 (391)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTTTH---
T ss_pred cchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh-----cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcccccc---
Confidence 0011111222211111 0002233333333 689999999877888899999999999876553110000
Q ss_pred HHHHHHhcCCCccCCCCccccCCCCCCCCCCCCCcccCCCchHHHHHHHHHhhc-----cCccEEEEcChhhhhHHHHHH
Q 012678 154 FQILLEKGYLAEQDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKT-----KACSGLIWNSFEDLEQTELTR 228 (458)
Q Consensus 154 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~s~~~le~~~~~~ 228 (458)
......+++....... ...+..+....++++..
T Consensus 152 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 189 (391)
T 3tsa_A 152 --------------------------------------FSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS---- 189 (391)
T ss_dssp --------------------------------------HHHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT----
T ss_pred --------------------------------------ccchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC----
Confidence 0001111122111111 11244445444444332
Q ss_pred hhhcCCCCccccCCccccccccCCCcccCccccchhhccCCCCcEEEEEcCcccc--CC-HHHHHHHHHHHHhC-CCceE
Q 012678 229 LHKDFPIPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVV--VN-VTEFLEIAWGLANS-RVPFL 304 (458)
Q Consensus 229 ~~~~~~~pv~~vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~--~~-~~~~~~~~~al~~~-~~~~i 304 (458)
......++.++ |+. .......|+...+++++|++++||... .. ...+..++++ ++. +.+++
T Consensus 190 -~~~~~~~~~~~-p~~------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v 254 (391)
T 3tsa_A 190 -DAPQGAPVQYV-PYN------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAV 254 (391)
T ss_dssp -TSCCCEECCCC-CCC------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEE
T ss_pred -CCCccCCeeee-cCC------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEE
Confidence 00001123333 111 111245677665678999999999854 23 6678888888 877 77888
Q ss_pred EEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhH
Q 012678 305 WVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVN 384 (458)
Q Consensus 305 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~n 384 (458)
|..++... +.+..++ +|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||..|
T Consensus 255 ~~~~~~~~---~~l~~~~--------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~ 321 (391)
T 3tsa_A 255 IAVPPEHR---ALLTDLP--------DNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDY 321 (391)
T ss_dssp EECCGGGG---GGCTTCC--------TTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHH
T ss_pred EEECCcch---hhcccCC--------CCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHH
Confidence 88765421 1122233 45588999999999999998 99999999999999999999999999999999
Q ss_pred HHHHHHHHhcceecCC---cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 012678 385 ARYVSHVWRVGLHLER---KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHI 455 (458)
Q Consensus 385 a~~v~~~~G~G~~l~~---~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 455 (458)
+.++++. |+|+.+.. +.+++.|.++|.++++| ++++++++++++++. ...+..++++.+.+.+
T Consensus 322 a~~~~~~-g~g~~~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~ 387 (391)
T 3tsa_A 322 ARNLAAA-GAGICLPDEQAQSDHEQFTDSIATVLGD---TGFAAAAIKLSDEIT----AMPHPAALVRTLENTA 387 (391)
T ss_dssp HHHHHHT-TSEEECCSHHHHTCHHHHHHHHHHHHTC---THHHHHHHHHHHHHH----TSCCHHHHHHHHHHC-
T ss_pred HHHHHHc-CCEEecCcccccCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHHHHH
Confidence 9999994 99999875 47899999999999999 899999999999887 6777777777776554
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=9.8e-34 Score=275.57 Aligned_cols=369 Identities=17% Similarity=0.188 Sum_probs=242.2
Q ss_pred cccccccCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEecCCCCC-----------
Q 012678 5 KESNVQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLW----------- 73 (458)
Q Consensus 5 ~~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 73 (458)
.+....+..+|||+|++.++.||++|++.||++|.++||+|++++++....... ..|+.+..++....
T Consensus 11 ~~~~~~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (412)
T 3otg_A 11 HSSGHIEGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLR-KLGFEPVATGMPVFDGFLAALRIRF 89 (412)
T ss_dssp -------CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHH-HTTCEEEECCCCHHHHHHHHHHHHH
T ss_pred cccCCcccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHH-hcCCceeecCcccccchhhhhhhhh
Confidence 344566677899999999999999999999999999999999999863211111 14788888874100
Q ss_pred -CCccCcccHHH----HHHHHHHh-cChhHHHHHHHHhhCCCCCCCeeEEEecCchhhHHHHHHHcCCCeEEEecchHHH
Q 012678 74 -ESEVSTENAIS----LLTVLNDK-CVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISS 147 (458)
Q Consensus 74 -~~~~~~~~~~~----~~~~~~~~-~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 147 (458)
........... ....+... ....+..+.+.+.+ ++||+||+|...+++..+|+.+|||+|.+.......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 164 (412)
T 3otg_A 90 DTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER-----LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP 164 (412)
T ss_dssp SCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH-----HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC
T ss_pred cccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh-----cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc
Confidence 00000000111 11111111 01112223333333 689999999877878899999999999865542210
Q ss_pred HHHHHHHHHHHHhcCCCccCCCCccccCCCCCCCCCCCCCcccCCCchHHHHHHHHHhh----------ccCccEEEEcC
Q 012678 148 FLAFSAFQILLEKGYLAEQDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSK----------TKACSGLIWNS 217 (458)
Q Consensus 148 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~s 217 (458)
.... ..+.+.+...... ...++.++..+
T Consensus 165 ~~~~------------------------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~ 202 (412)
T 3otg_A 165 DDLT------------------------------------------RSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIF 202 (412)
T ss_dssp SHHH------------------------------------------HHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECS
T ss_pred hhhh------------------------------------------HHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeC
Confidence 0000 0001111111111 12344556655
Q ss_pred hhhhhHHHHHHhhhcCCCCccccCCccccccccCCCcccCccccchh-hccCCCCcEEEEEcCccccCCHHHHHHHHHHH
Q 012678 218 FEDLEQTELTRLHKDFPIPMFPIGPFHKYCLASSSSLLSQDQSCISW-LDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGL 296 (458)
Q Consensus 218 ~~~le~~~~~~~~~~~~~pv~~vGpl~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al 296 (458)
.+.++...-. . .....|+.++++- ......+| ....+++++|++++||......+.+..+++++
T Consensus 203 ~~~~~~~~~~-~-~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l 267 (412)
T 3otg_A 203 PPSLQEPEFR-A-RPRRHELRPVPFA-------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGL 267 (412)
T ss_dssp CGGGSCHHHH-T-CTTEEECCCCCCC-------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHH
T ss_pred CHHhcCCccc-C-CCCcceeeccCCC-------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHH
Confidence 5555533110 0 0001112222211 01113456 33335788999999999766677788899999
Q ss_pred HhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHHHHhhCCcccccc
Q 012678 297 ANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQP 376 (458)
Q Consensus 297 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P 376 (458)
++.+.+++|..++.... +.+..+++ |+.+.+|+|+.++|+++++ ||+|||+||++||+++|+|+|++|
T Consensus 268 ~~~~~~~~~~~g~~~~~--~~l~~~~~--------~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p 335 (412)
T 3otg_A 268 AGLDADVLVASGPSLDV--SGLGEVPA--------NVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFP 335 (412)
T ss_dssp HTSSSEEEEECCSSCCC--TTCCCCCT--------TEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECC
T ss_pred HcCCCEEEEEECCCCCh--hhhccCCC--------cEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecC
Confidence 98888999988765311 11223344 4489999999999999999 999999999999999999999999
Q ss_pred cccchhhHHHHHHHHHhcceecCC-cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 012678 377 CFGDQLVNARYVSHVWRVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHI 455 (458)
Q Consensus 377 ~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 455 (458)
...||..|++++++. |+|..+.. ++++++|.++|.++++| +++++++.+.++++. ...+..+.++.+.+.+
T Consensus 336 ~~~~q~~~~~~v~~~-g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 336 WAGDSFANAQAVAQA-GAGDHLLPDNISPDSVSGAAKRLLAE---ESYRAGARAVAAEIA----AMPGPDEVVRLLPGFA 407 (412)
T ss_dssp CSTTHHHHHHHHHHH-TSEEECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----HSCCHHHHHTTHHHHH
T ss_pred CchhHHHHHHHHHHc-CCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHh
Confidence 999999999999995 99999988 78999999999999999 899999999988887 5678888888777765
Q ss_pred h
Q 012678 456 L 456 (458)
Q Consensus 456 ~ 456 (458)
.
T Consensus 408 ~ 408 (412)
T 3otg_A 408 S 408 (412)
T ss_dssp C
T ss_pred c
Confidence 4
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=6.3e-29 Score=236.46 Aligned_cols=305 Identities=13% Similarity=0.110 Sum_probs=188.2
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCC--CCCCCCCceEEecCCC-CCCCc--cCcccHHHHHHHH
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSP--NPSNYPHFSFNSISES-LWESE--VSTENAISLLTVL 89 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~ 89 (458)
.||++...|+-||++|+++||++|.++||+|+|+++....+ ...+ .|+.++.++.. +.... .....+..++..
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~-~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~- 80 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK-AGLPLHLIQVSGLRGKGLKSLVKAPLELLKS- 80 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG-GTCCEEECC--------------CHHHHHHH-
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh-cCCcEEEEECCCcCCCCHHHHHHHHHHHHHH-
Confidence 48999888877999999999999999999999998764321 1222 57788877732 21100 001111122211
Q ss_pred HHhcChhHHHHHHHHhhCCCCCCCeeEEEecCch--hhHHHHHHHcCCCeEEEecchHHHHHHHHHHHHHHHhcCCCccC
Q 012678 90 NDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIW--HFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGYLAEQD 167 (458)
Q Consensus 90 ~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 167 (458)
+.....-+.+ ++||+||++..+ ..+..+|+.+|||+++.....
T Consensus 81 -------~~~~~~~l~~-----~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~----------------------- 125 (365)
T 3s2u_A 81 -------LFQALRVIRQ-----LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNA----------------------- 125 (365)
T ss_dssp -------HHHHHHHHHH-----HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSS-----------------------
T ss_pred -------HHHHHHHHHh-----cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecch-----------------------
Confidence 1122222233 689999999754 445678999999999743210
Q ss_pred CCCccccCCCCCCCCCCCCCcccCCCchHHHHHHHHHhhccCccEEEEcChhhhhHHHHHHhhhcCCCCccccCCccccc
Q 012678 168 SQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDFPIPMFPIGPFHKYC 247 (458)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~pv~~vGpl~~~~ 247 (458)
++++ .-+ +. .+.++.+ ..++++..+. ....+++|......
T Consensus 126 ------~~G~------------------~nr----~l--~~~a~~v-~~~~~~~~~~---------~~k~~~~g~pvr~~ 165 (365)
T 3s2u_A 126 ------VAGT------------------ANR----SL--APIARRV-CEAFPDTFPA---------SDKRLTTGNPVRGE 165 (365)
T ss_dssp ------SCCH------------------HHH----HH--GGGCSEE-EESSTTSSCC------------CEECCCCCCGG
T ss_pred ------hhhh------------------HHH----hh--cccccee-eecccccccC---------cCcEEEECCCCchh
Confidence 0000 000 11 1122333 2333322110 12356666443322
Q ss_pred cccCCCcccCccccchhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhCC----CceEEEEcCCCCCCCcccCCCch
Q 012678 248 LASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSR----VPFLWVVRPGLVPGVEWLEPLPK 323 (458)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~----~~~i~~~~~~~~~~~~~~~~l~~ 323 (458)
.. ... ..+....+++++|++..||.... ...+.+.++++... ..++|.++... .+.+.+
T Consensus 166 ~~------~~~---~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~------~~~~~~ 228 (365)
T 3s2u_A 166 LF------LDA---HARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQH------AEITAE 228 (365)
T ss_dssp GC------CCT---TSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTT------HHHHHH
T ss_pred hc------cch---hhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCccc------cccccc
Confidence 11 000 11112234678999999998752 33344667776643 35666665432 111111
Q ss_pred hHHHhhcCCcceeeccChh-hhhcCCCccccccccCchhHHHHHhhCCcccccccc----cchhhHHHHHHHHHhcceec
Q 012678 324 GFLEMLDGRGHIVKWAPQQ-EVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCF----GDQLVNARYVSHVWRVGLHL 398 (458)
Q Consensus 324 ~~~~~~~~~~~~~~~ipq~-~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~v~~~~G~G~~l 398 (458)
. ....+.++.+.+|+++. ++|..+|+ +|||+|.+|+.|++++|+|+|++|.. .+|..||+.+++. |+|+.+
T Consensus 229 ~-~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~~l 304 (365)
T 3s2u_A 229 R-YRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGRLL 304 (365)
T ss_dssp H-HHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEEEC
T ss_pred e-ecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEEEe
Confidence 1 12344577888999974 69999999 99999999999999999999999974 5899999999995 999999
Q ss_pred CC-cccHHHHHHHHHHHhcc
Q 012678 399 ER-KFERREIETAIRRVTVE 417 (458)
Q Consensus 399 ~~-~~~~~~l~~~i~~ll~~ 417 (458)
.. ++|++.|.++|.++++|
T Consensus 305 ~~~~~~~~~L~~~i~~ll~d 324 (365)
T 3s2u_A 305 PQKSTGAAELAAQLSEVLMH 324 (365)
T ss_dssp CTTTCCHHHHHHHHHHHHHC
T ss_pred ecCCCCHHHHHHHHHHHHCC
Confidence 87 89999999999999998
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=4.9e-28 Score=205.01 Aligned_cols=159 Identities=25% Similarity=0.415 Sum_probs=134.8
Q ss_pred cccchhhccCCCCcEEEEEcCcccc-CCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceee
Q 012678 259 QSCISWLDKQAAKSVMYVSFGSIVV-VNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVK 337 (458)
Q Consensus 259 ~~~~~~l~~~~~~~~i~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 337 (458)
.++.+|++..+++++||+++||... .+.+.+..+++++++.+.+++|+.++.. ...+++ |+++.+
T Consensus 9 ~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~------~~~~~~--------~v~~~~ 74 (170)
T 2o6l_A 9 KEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK------PDTLGL--------NTRLYK 74 (170)
T ss_dssp HHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC------CTTCCT--------TEEEES
T ss_pred HHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC------cccCCC--------cEEEec
Confidence 4488999876678899999999874 5677888999999988899999987542 122343 448999
Q ss_pred ccChhhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCC-cccHHHHHHHHHHHhc
Q 012678 338 WAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLER-KFERREIETAIRRVTV 416 (458)
Q Consensus 338 ~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~~i~~ll~ 416 (458)
|+||.+++.|+.+++||||||+||++||+++|+|+|++|...||..||+++++ .|+|+.++. ++++++|.++|.++++
T Consensus 75 ~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~ 153 (170)
T 2o6l_A 75 WIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFNTMSSTDLLNALKRVIN 153 (170)
T ss_dssp SCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEeccccCCHHHHHHHHHHHHc
Confidence 99999999665555599999999999999999999999999999999999999 599999987 7899999999999999
Q ss_pred cchhHHHHHHHHHHHHHHH
Q 012678 417 EAEGQEMRERIMHLKEKLE 435 (458)
Q Consensus 417 ~~~~~~~~~~a~~~~~~~~ 435 (458)
| ++|+++++++++.++
T Consensus 154 ~---~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 154 D---PSYKENVMKLSRIQH 169 (170)
T ss_dssp C---HHHHHHHHHHC----
T ss_pred C---HHHHHHHHHHHHHhh
Confidence 9 899999999998876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.88 E-value=3.5e-21 Score=183.64 Aligned_cols=337 Identities=12% Similarity=0.077 Sum_probs=203.1
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCC-CCCCCCCceEEecCCCCCCCccCcccHHHHHHHHHHh
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSP-NPSNYPHFSFNSISESLWESEVSTENAISLLTVLNDK 92 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (458)
+|||++++.+..||..+++.|+++|.++||+|++++...... ......++.+..++...... ......+......
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~ 81 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRG----KGIKALIAAPLRI 81 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTT----CCHHHHHTCHHHH
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCc----CccHHHHHHHHHH
Confidence 489999998777999999999999999999999999853211 00111367777665321111 0111111000000
Q ss_pred cChhHHHHHHHHhhCCCCCCCeeEEEecCch--hhHHHHHHHcCCCeEEEecchHHHHHHHHHHHHHHHhcCCCccCCCC
Q 012678 93 CVVPFQDCLAKLISNGDQEEPVTCLITDAIW--HFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGYLAEQDSQL 170 (458)
Q Consensus 93 ~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 170 (458)
. ..+..+.+.+.+ .+||+|+++... ..+..++..+|+|+|.......
T Consensus 82 ~-~~~~~l~~~l~~-----~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------------------------- 130 (364)
T 1f0k_A 82 F-NAWRQARAIMKA-----YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI------------------------- 130 (364)
T ss_dssp H-HHHHHHHHHHHH-----HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS-------------------------
T ss_pred H-HHHHHHHHHHHh-----cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC-------------------------
Confidence 0 111222222332 579999998643 4456788889999986443210
Q ss_pred ccccCCCCCCCCCCCCCcccCCCchHHHHHHHHHhhccCccEEEEcChhhhhHHHHHHhhhcCCCCccccCCcccccccc
Q 012678 171 EKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDFPIPMFPIGPFHKYCLAS 250 (458)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~pv~~vGpl~~~~~~~ 250 (458)
+ . ...+ + ..+.++.++..+... ++ ++..+|.-.....
T Consensus 131 ----~---------------~---~~~~----~--~~~~~d~v~~~~~~~------------~~-~~~~i~n~v~~~~-- 167 (364)
T 1f0k_A 131 ----A---------------G---LTNK----W--LAKIATKVMQAFPGA------------FP-NAEVVGNPVRTDV-- 167 (364)
T ss_dssp ----C---------------C---HHHH----H--HTTTCSEEEESSTTS------------SS-SCEECCCCCCHHH--
T ss_pred ----C---------------c---HHHH----H--HHHhCCEEEecChhh------------cC-CceEeCCccchhh--
Confidence 0 0 0000 0 112345555543221 11 3445553221111
Q ss_pred CCCcccCccccchhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhC--CCceEEEEcCCCCCCCcccCCCchhHHH-
Q 012678 251 SSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANS--RVPFLWVVRPGLVPGVEWLEPLPKGFLE- 327 (458)
Q Consensus 251 ~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~~- 327 (458)
..... ..+.+...+++++|+++.|+.. ..+....++++++.. +.++++.++.+. .+.+.+
T Consensus 168 ----~~~~~-~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~~----------~~~l~~~ 230 (364)
T 1f0k_A 168 ----LALPL-PQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKGS----------QQSVEQA 230 (364)
T ss_dssp ----HTSCC-HHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTTC----------HHHHHHH
T ss_pred ----cccch-hhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCch----------HHHHHHH
Confidence 00000 1112222235677888888875 345555566776654 355566665432 122222
Q ss_pred --hhc-CCcceeeccCh-hhhhcCCCccccccccCchhHHHHHhhCCcccccccc---cchhhHHHHHHHHHhcceecCC
Q 012678 328 --MLD-GRGHIVKWAPQ-QEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCF---GDQLVNARYVSHVWRVGLHLER 400 (458)
Q Consensus 328 --~~~-~~~~~~~~ipq-~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v~~~~G~G~~l~~ 400 (458)
... +++.+.+|+++ ..++..+++ +|+++|.+++.||+++|+|+|+.|.. .||..|++.+.+. |.|..++.
T Consensus 231 ~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~~ 307 (364)
T 1f0k_A 231 YAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIEQ 307 (364)
T ss_dssp HHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECCG
T ss_pred HhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEecc
Confidence 222 47788899954 679999999 99999999999999999999999988 7999999999995 99998887
Q ss_pred -cccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012678 401 -KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 401 -~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (458)
++++++|.++|.++ | +..+++..+-+.+.. ...+..+.++.+.+..++
T Consensus 308 ~d~~~~~la~~i~~l--~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 308 PQLSVDAVANTLAGW--S---RETLLTMAERARAAS----IPDATERVANEVSRVARA 356 (364)
T ss_dssp GGCCHHHHHHHHHTC--C---HHHHHHHHHHHHHTC----CTTHHHHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHhc--C---HHHHHHHHHHHHHhh----ccCHHHHHHHHHHHHHHH
Confidence 67799999999999 5 455544433333322 345667777777776654
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.65 E-value=3.3e-16 Score=135.32 Aligned_cols=132 Identities=12% Similarity=0.049 Sum_probs=95.6
Q ss_pred CCCCcEEEEEcCccccCCHHHHHHH-----HHHHHhCC-CceEEEEcCCCCCCCcccCCCchhHHHhh------------
Q 012678 268 QAAKSVMYVSFGSIVVVNVTEFLEI-----AWGLANSR-VPFLWVVRPGLVPGVEWLEPLPKGFLEML------------ 329 (458)
Q Consensus 268 ~~~~~~i~vs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~~~~~------------ 329 (458)
.+++++|||+.||... -.+.+..+ +++|.+.+ .++++.++..... ..+.+....
T Consensus 25 ~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-------~~~~~~~~~~~~~~~~l~p~~ 96 (224)
T 2jzc_A 25 IIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-------EFEHLVQERGGQRESQKIPID 96 (224)
T ss_dssp CCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-------CCCSHHHHHTCEECSCCCSSC
T ss_pred CCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-------hHHHHHHhhhccccccccccc
Confidence 3467899999999743 23333333 48888777 7899998865420 011111000
Q ss_pred --------------cC--CcceeeccChh-hhhc-CCCccccccccCchhHHHHHhhCCcccccccc----cchhhHHHH
Q 012678 330 --------------DG--RGHIVKWAPQQ-EVLA-HPAVGGFWTHNGWNSTLESICEGVPMICQPCF----GDQLVNARY 387 (458)
Q Consensus 330 --------------~~--~~~~~~~ipq~-~ll~-~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~ 387 (458)
.. ++.+.+|+++. ++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~ 174 (224)
T 2jzc_A 97 QFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADK 174 (224)
T ss_dssp TTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHH
T ss_pred cccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHH
Confidence 01 22355888875 7999 9999 99999999999999999999999984 479999999
Q ss_pred HHHHHhcceecCCcccHHHHHHHHHHH
Q 012678 388 VSHVWRVGLHLERKFERREIETAIRRV 414 (458)
Q Consensus 388 v~~~~G~G~~l~~~~~~~~l~~~i~~l 414 (458)
+++ .|+++.+ +++.|.++|.++
T Consensus 175 l~~-~G~~~~~----~~~~L~~~i~~l 196 (224)
T 2jzc_A 175 FVE-LGYVWSC----APTETGLIAGLR 196 (224)
T ss_dssp HHH-HSCCCEE----CSCTTTHHHHHH
T ss_pred HHH-CCCEEEc----CHHHHHHHHHHH
Confidence 999 4998765 567777777777
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.60 E-value=1.2e-14 Score=131.20 Aligned_cols=116 Identities=9% Similarity=0.038 Sum_probs=88.6
Q ss_pred CCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhh--cCCcceeeccChh-hhhc
Q 012678 270 AKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEML--DGRGHIVKWAPQQ-EVLA 346 (458)
Q Consensus 270 ~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~ipq~-~ll~ 346 (458)
+.+.|+|++|... .......+++++.... ++.++.+.+. ...+.+.+.. ..|+.+..|+++. +++.
T Consensus 156 ~~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~~--------~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~ 224 (282)
T 3hbm_A 156 KKYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSSN--------PNLKKLQKFAKLHNNIRLFIDHENIAKLMN 224 (282)
T ss_dssp CCEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTTC--------TTHHHHHHHHHTCSSEEEEESCSCHHHHHH
T ss_pred cCCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCCc--------hHHHHHHHHHhhCCCEEEEeCHHHHHHHHH
Confidence 4678999999754 3345566788887654 5556665442 1233333322 2467888999975 5999
Q ss_pred CCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCC
Q 012678 347 HPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLER 400 (458)
Q Consensus 347 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~ 400 (458)
.+++ +||+|| +|+.|+++.|+|+|++|...+|..||+.+++. |++..+..
T Consensus 225 ~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 225 ESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp TEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred HCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 9999 999999 89999999999999999999999999999994 99998875
No 25
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.47 E-value=1.1e-11 Score=120.61 Aligned_cols=383 Identities=14% Similarity=0.060 Sum_probs=191.8
Q ss_pred CCCEEEEEcCC-----CCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCC-------------------CCCCceEEec
Q 012678 13 KGRRVILFPLP-----LQGHINPMLQLASILYSKGFSITIIHTNFNSPNPS-------------------NYPHFSFNSI 68 (458)
Q Consensus 13 ~~~~il~~~~~-----~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~-------------------~~~~~~~~~~ 68 (458)
++|||++++.. ..|--.-+..||++|+++||+|+++++........ ...++.+..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 57999999843 23555668999999999999999999753322110 2245666666
Q ss_pred CCCCCCCccCcccHHHH-HHHHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCch--hhHHHHHHHcCCCeEEEecchH
Q 012678 69 SESLWESEVSTENAISL-LTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIW--HFAQTVADTLRLPRIVLRTSSI 145 (458)
Q Consensus 69 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~--~~~~~~A~~lgiP~v~~~~~~~ 145 (458)
+................ ...+ ......+...+..+.... .+||+|.+.... ..+..++...++|+|.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~ 156 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKA-VTFGRASVLLLNDLLREE---PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLN 156 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHH-HHHHHHHHHHHHHHTTTS---CCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCC
T ss_pred cchhccccccccCCcchhhhhh-HHHHHHHHHHHHHHhccC---CCCeEEEecchhhhhhHHHHhhccCCCEEEEecccc
Confidence 54111000000101111 1111 111122334445543211 689999987643 3345667788999988665532
Q ss_pred HHHHHHHHHHHHHHhcCCCccCCCCccccCCCCCCCCCCCCCcccCCCchHHHHHHHHHhhccCccEEEEcChhhhhHHH
Q 012678 146 SSFLAFSAFQILLEKGYLAEQDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTE 225 (458)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~ 225 (458)
........ ...... .... ....... .......++.++..|....+. .
T Consensus 157 ~~~~~~~~---~~~~~~--------------------~~~~---~~~~~~~------~~~~~~~ad~ii~~S~~~~~~-~ 203 (439)
T 3fro_A 157 KSKLPAFY---FHEAGL--------------------SELA---PYPDIDP------EHTGGYIADIVTTVSRGYLID-E 203 (439)
T ss_dssp CCCEEHHH---HHHTTC--------------------GGGC---CSSEECH------HHHHHHHCSEEEESCHHHHHH-T
T ss_pred cccCchHH---hCcccc--------------------cccc---ccceeeH------hhhhhhhccEEEecCHHHHHH-H
Confidence 10000000 000000 0000 0000011 112234567778877765444 1
Q ss_pred HHHhhhcCCCCccccCCccccccccCCCccc-----CccccchhhccCCCCcEEEEEcCccc-c-CCHHHHHHHHHHHHh
Q 012678 226 LTRLHKDFPIPMFPIGPFHKYCLASSSSLLS-----QDQSCISWLDKQAAKSVMYVSFGSIV-V-VNVTEFLEIAWGLAN 298 (458)
Q Consensus 226 ~~~~~~~~~~pv~~vGpl~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~i~vs~Gs~~-~-~~~~~~~~~~~al~~ 298 (458)
...+.. ...++..|..-.....- .....+ ....+.+-+.- +++ .+++..|+.. . ...+.+...+..+..
T Consensus 204 ~~~~~~-~~~~i~vi~ngvd~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~ 279 (439)
T 3fro_A 204 WGFFRN-FEGKITYVFNGIDCSFW-NESYLTGSRDERKKSLLSKFGM-DEG-VTFMFIGRFDRGQKGVDVLLKAIEILSS 279 (439)
T ss_dssp HHHHGG-GTTSEEECCCCCCTTTS-CGGGSCSCHHHHHHHHHHHHTC-CSC-EEEEEECCSSCTTBCHHHHHHHHHHHHT
T ss_pred hhhhhh-cCCceeecCCCCCchhc-CcccccchhhhhHHHHHHHcCC-CCC-cEEEEEcccccccccHHHHHHHHHHHHh
Confidence 111100 12233333321111100 000000 11112222222 234 7777888876 3 334344444444443
Q ss_pred C----CCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhh---hhcCCCccccccc----cCchhHHHHHh
Q 012678 299 S----RVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQE---VLAHPAVGGFWTH----NGWNSTLESIC 367 (458)
Q Consensus 299 ~----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~---ll~~~~~~~~I~H----gG~~s~~eal~ 367 (458)
. +.++++ ++.+. ......-....+..++++.+.+|+|+.+ ++..+++ +|.- |--+++.||++
T Consensus 280 ~~~~~~~~l~i-~G~g~----~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma 352 (439)
T 3fro_A 280 KKEFQEMRFII-IGKGD----PELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMC 352 (439)
T ss_dssp SGGGGGEEEEE-ECCCC----HHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHH
T ss_pred cccCCCeEEEE-EcCCC----hhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHH
Confidence 2 333333 33221 0000000111222333334568899854 7888888 7733 33479999999
Q ss_pred hCCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhc-cch-hHHHHHHHHHHHHHHHHHHhhCCChH
Q 012678 368 EGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTV-EAE-GQEMRERIMHLKEKLELSLLEAGSSY 445 (458)
Q Consensus 368 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~-~~~-~~~~~~~a~~~~~~~~~~~~~~g~~~ 445 (458)
+|+|+|+... ......+++ |.|..++. -+++++.++|.++++ +.+ ...+.+++++..+ .-+..
T Consensus 353 ~G~Pvi~s~~----~~~~e~~~~--~~g~~~~~-~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~--------~~s~~ 417 (439)
T 3fro_A 353 LGAIPIASAV----GGLRDIITN--ETGILVKA-GDPGELANAILKALELSRSDLSKFRENCKKRAM--------SFSWE 417 (439)
T ss_dssp TTCEEEEESS----THHHHHCCT--TTCEEECT-TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH--------TSCHH
T ss_pred CCCCeEEcCC----CCcceeEEc--CceEEeCC-CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh--------hCcHH
Confidence 9999998753 344455543 78887775 589999999999998 632 3455555555443 24677
Q ss_pred HHHHHHHHHHhcC
Q 012678 446 QSLERLVDHILSF 458 (458)
Q Consensus 446 ~~~~~~~~~~~~~ 458 (458)
..++++++.++++
T Consensus 418 ~~~~~~~~~~~~~ 430 (439)
T 3fro_A 418 KSAERYVKAYTGS 430 (439)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHH
Confidence 8888888877653
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.44 E-value=2.6e-12 Score=123.36 Aligned_cols=344 Identities=12% Similarity=0.033 Sum_probs=185.8
Q ss_pred CCCCEEEEEcC--C--CCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCC---CCCCCCCceEEecCCCCCCCccCcccHHH
Q 012678 12 KKGRRVILFPL--P--LQGHINPMLQLASILYSKGFSITIIHTNFNSP---NPSNYPHFSFNSISESLWESEVSTENAIS 84 (458)
Q Consensus 12 ~~~~~il~~~~--~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (458)
+++|||++++. + ..|.-..+..|++.| +||+|++++...... ......++.+..++....-. ..
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-- 72 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLP-----TP-- 72 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCS-----CH--
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEcccccccc-----ch--
Confidence 56799999985 3 347888899999999 799999998863321 11122467777776422111 00
Q ss_pred HHHHHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCch--hhHHHHHHHcCCCeEEEecchHHHHHHHHHHHHHHHhcC
Q 012678 85 LLTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIW--HFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGY 162 (458)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 162 (458)
.....+.++.+. .+||+|++.... .....++..+++|.+++........ .
T Consensus 73 -----------~~~~~l~~~~~~----~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~---~---------- 124 (394)
T 3okp_A 73 -----------TTAHAMAEIIRE----REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG---W---------- 124 (394)
T ss_dssp -----------HHHHHHHHHHHH----TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH---H----------
T ss_pred -----------hhHHHHHHHHHh----cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh---h----------
Confidence 011112222222 679999976543 3445568889999555433321110 0
Q ss_pred CCccCCCCccccCCCCCCCCCCCCCcccCCCchHHHHHHHHHhhccCccEEEEcChhhhhHHHHHHhhhcCCCCccccCC
Q 012678 163 LAEQDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDFPIPMFPIGP 242 (458)
Q Consensus 163 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~pv~~vGp 242 (458)
......... .....+.++.++..|....+.-. ..... ..++..|..
T Consensus 125 ----------------------------~~~~~~~~~---~~~~~~~~d~ii~~s~~~~~~~~-~~~~~--~~~~~vi~n 170 (394)
T 3okp_A 125 ----------------------------SMLPGSRQS---LRKIGTEVDVLTYISQYTLRRFK-SAFGS--HPTFEHLPS 170 (394)
T ss_dssp ----------------------------TTSHHHHHH---HHHHHHHCSEEEESCHHHHHHHH-HHHCS--SSEEEECCC
T ss_pred ----------------------------hhcchhhHH---HHHHHHhCCEEEEcCHHHHHHHH-HhcCC--CCCeEEecC
Confidence 000011111 12233567788888865544321 11111 123444442
Q ss_pred ccccccccCCCc-cc-CccccchhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhC-----CCceEEEEcCCCCCCC
Q 012678 243 FHKYCLASSSSL-LS-QDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANS-----RVPFLWVVRPGLVPGV 315 (458)
Q Consensus 243 l~~~~~~~~~~~-~~-~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~ 315 (458)
-.....- .+ .+ ....+.+-+.. +++..+++..|+... .+.+..++++++.. +.++++. +.+.
T Consensus 171 gv~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g~---- 239 (394)
T 3okp_A 171 GVDVKRF---TPATPEDKSATRKKLGF-TDTTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQLLIV-GSGR---- 239 (394)
T ss_dssp CBCTTTS---CCCCHHHHHHHHHHTTC-CTTCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEEEEE-CCCT----
T ss_pred CcCHHHc---CCCCchhhHHHHHhcCC-CcCceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEEEEE-cCch----
Confidence 2211110 00 00 01112222222 234466777788653 33344445554432 3444443 3221
Q ss_pred cccCCCchhHH---HhhcCCcceeeccChhh---hhcCCCcccccc-----------ccCchhHHHHHhhCCcccccccc
Q 012678 316 EWLEPLPKGFL---EMLDGRGHIVKWAPQQE---VLAHPAVGGFWT-----------HNGWNSTLESICEGVPMICQPCF 378 (458)
Q Consensus 316 ~~~~~l~~~~~---~~~~~~~~~~~~ipq~~---ll~~~~~~~~I~-----------HgG~~s~~eal~~GvP~l~~P~~ 378 (458)
..+.+. ....+++.+.+|+|+.+ ++..+++ +|. -|..+++.||+++|+|+|+.+..
T Consensus 240 -----~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~ 312 (394)
T 3okp_A 240 -----YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSG 312 (394)
T ss_dssp -----THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSST
T ss_pred -----HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCC
Confidence 112222 22335678899998655 7888998 776 55567999999999999997653
Q ss_pred cchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhccch-hHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012678 379 GDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEAE-GQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 379 ~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (458)
.....+.+ |.|...+. -+++++.++|.++++|.+ ...+.+++++. ++ +.-+..+.++.+.+.+++
T Consensus 313 ----~~~e~i~~--~~g~~~~~-~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~---~~----~~~s~~~~~~~~~~~~~~ 378 (394)
T 3okp_A 313 ----GAPETVTP--ATGLVVEG-SDVDKLSELLIELLDDPIRRAAMGAAGRAH---VE----AEWSWEIMGERLTNILQS 378 (394)
T ss_dssp ----TGGGGCCT--TTEEECCT-TCHHHHHHHHHHHHTCHHHHHHHHHHHHHH---HH----HHTBHHHHHHHHHHHHHS
T ss_pred ----ChHHHHhc--CCceEeCC-CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH---HH----HhCCHHHHHHHHHHHHHH
Confidence 23333443 56777665 579999999999999832 22333333332 22 334678888888888876
Q ss_pred C
Q 012678 458 F 458 (458)
Q Consensus 458 ~ 458 (458)
+
T Consensus 379 ~ 379 (394)
T 3okp_A 379 E 379 (394)
T ss_dssp C
T ss_pred h
Confidence 4
No 27
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.43 E-value=3e-11 Score=117.73 Aligned_cols=366 Identities=13% Similarity=0.084 Sum_probs=186.0
Q ss_pred cCCCCEEEEEcC-----------CCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCC---CCCCCceEEecCCCCCCCc
Q 012678 11 QKKGRRVILFPL-----------PLQGHINPMLQLASILYSKGFSITIIHTNFNSPNP---SNYPHFSFNSISESLWESE 76 (458)
Q Consensus 11 ~~~~~~il~~~~-----------~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 76 (458)
..+.|||++++. ...|+-..+..|+++|.++||+|++++........ ....++.++.++.......
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~ 96 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGL 96 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSC
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCcccc
Confidence 345689999995 23478888999999999999999999875321111 1114677776663211110
Q ss_pred cCcccHHHHHHHHHHhcChhHHHHHHH-HhhCCCCCCCeeEEEecCch--hhHHHHHHHcCCCeEEEecchHHHHHHHHH
Q 012678 77 VSTENAISLLTVLNDKCVVPFQDCLAK-LISNGDQEEPVTCLITDAIW--HFAQTVADTLRLPRIVLRTSSISSFLAFSA 153 (458)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~~-l~~~~~~~~~pDlvI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 153 (458)
...+....+..+. ..+++. +... .+||+|++.... ..+..++..+++|+|..........
T Consensus 97 -~~~~~~~~~~~~~-------~~~~~~~~~~~----~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~----- 159 (438)
T 3c48_A 97 -SKEELPTQLAAFT-------GGMLSFTRREK----VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK----- 159 (438)
T ss_dssp -CGGGGGGGHHHHH-------HHHHHHHHHHT----CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH-----
T ss_pred -chhHHHHHHHHHH-------HHHHHHHHhcc----CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc-----
Confidence 0111111111111 112222 2221 249999987533 3344577788999988665532110
Q ss_pred HHHHHHhcCCCccCCCCccccCCCCCCCCCCCCCcccCCC-chHHHHHHHHHhhccCccEEEEcChhhhhHHHHHHhhhc
Q 012678 154 FQILLEKGYLAEQDSQLEKPVTELPPLRVKDIPIIVTHDT-RNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKD 232 (458)
Q Consensus 154 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~ 232 (458)
...... . ... ......+ .....+.++.++..|....+.- ...
T Consensus 160 ------~~~~~~-------------------~-----~~~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~-----~~~ 202 (438)
T 3c48_A 160 ------NSYRDD-------------------S-----DTPESEARRIC--EQQLVDNADVLAVNTQEEMQDL-----MHH 202 (438)
T ss_dssp ------SCC----------------------------CCHHHHHHHHH--HHHHHHHCSEEEESSHHHHHHH-----HHH
T ss_pred ------cccccc-------------------c-----CCcchHHHHHH--HHHHHhcCCEEEEcCHHHHHHH-----HHH
Confidence 000000 0 000 0001111 1123456788888886654432 111
Q ss_pred CC---CCccccCCccccccccCCCcccCc--cccchhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhC-----CCc
Q 012678 233 FP---IPMFPIGPFHKYCLASSSSLLSQD--QSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANS-----RVP 302 (458)
Q Consensus 233 ~~---~pv~~vGpl~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~ 302 (458)
++ .++..|..-.....- ...+.. ..+.+-+.- +++..+++..|+... .+.+..+++|++.. +..
T Consensus 203 ~g~~~~k~~vi~ngvd~~~~---~~~~~~~~~~~r~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~p~~~ 276 (438)
T 3c48_A 203 YDADPDRISVVSPGADVELY---SPGNDRATERSRRELGI-PLHTKVVAFVGRLQP--FKGPQVLIKAVAALFDRDPDRN 276 (438)
T ss_dssp HCCCGGGEEECCCCCCTTTS---CCC----CHHHHHHTTC-CSSSEEEEEESCBSG--GGCHHHHHHHHHHHHHHCTTCS
T ss_pred hCCChhheEEecCCcccccc---CCcccchhhhhHHhcCC-CCCCcEEEEEeeecc--cCCHHHHHHHHHHHHhhCCCcc
Confidence 12 123344322211110 000000 001222221 134456777788664 23344444444432 112
Q ss_pred e-EEEEcCCCCCCCcccCCCchhHH---Hh--hcCCcceeeccChh---hhhcCCCcccccccc----CchhHHHHHhhC
Q 012678 303 F-LWVVRPGLVPGVEWLEPLPKGFL---EM--LDGRGHIVKWAPQQ---EVLAHPAVGGFWTHN----GWNSTLESICEG 369 (458)
Q Consensus 303 ~-i~~~~~~~~~~~~~~~~l~~~~~---~~--~~~~~~~~~~ipq~---~ll~~~~~~~~I~Hg----G~~s~~eal~~G 369 (458)
+ ++.++..... +...+.+. +. ..+++.+.+|+|+. .++..+++ +|.-. ..+++.||+++|
T Consensus 277 ~~l~i~G~~~~~-----g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G 349 (438)
T 3c48_A 277 LRVIICGGPSGP-----NATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASG 349 (438)
T ss_dssp EEEEEECCBC-----------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTT
T ss_pred eEEEEEeCCCCC-----CcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcC
Confidence 3 2333331100 01112222 12 23577889999864 47888998 77543 346899999999
Q ss_pred CcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhccch-hHHHHHHHHHHHHHHHHHHhhCCChHHHH
Q 012678 370 VPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEAE-GQEMRERIMHLKEKLELSLLEAGSSYQSL 448 (458)
Q Consensus 370 vP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~~~~~~~~~~~~~g~~~~~~ 448 (458)
+|+|+.+. ......+++. +.|..++. -+++++.++|.++++|.+ ...+.+++++...++ +..+.+
T Consensus 350 ~PvI~~~~----~~~~e~i~~~-~~g~~~~~-~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~--------s~~~~~ 415 (438)
T 3c48_A 350 TPVIAARV----GGLPIAVAEG-ETGLLVDG-HSPHAWADALATLLDDDETRIRMGEDAVEHARTF--------SWAATA 415 (438)
T ss_dssp CCEEEESC----TTHHHHSCBT-TTEEEESS-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred CCEEecCC----CChhHHhhCC-CcEEECCC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhC--------CHHHHH
Confidence 99998754 4455666663 67887765 589999999999999832 334455555554442 255556
Q ss_pred HHHHHHHhc
Q 012678 449 ERLVDHILS 457 (458)
Q Consensus 449 ~~~~~~~~~ 457 (458)
+++++.+++
T Consensus 416 ~~~~~~~~~ 424 (438)
T 3c48_A 416 AQLSSLYND 424 (438)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666655543
No 28
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.39 E-value=6e-11 Score=114.28 Aligned_cols=338 Identities=11% Similarity=0.038 Sum_probs=176.1
Q ss_pred cCCCCEEEEEcCC---C-CcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCC---CCceEEecCCCCCCCccCcccHH
Q 012678 11 QKKGRRVILFPLP---L-QGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNY---PHFSFNSISESLWESEVSTENAI 83 (458)
Q Consensus 11 ~~~~~~il~~~~~---~-~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 83 (458)
..+.|||++++.. . .|.-.-+..++++|.++||+|++++........... .+ .+..++.. ....
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~--------~~~~ 87 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYN--------GSVA 87 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECC-CCC-----------------
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCC-cEEecccc--------CCcc
Confidence 3457999999843 2 466688999999999999999999986332211110 01 11111100 0000
Q ss_pred HHHHHHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCch--hhHHHHHHHcCCCeEEEecchHHHHHHHHHHHHHHHhc
Q 012678 84 SLLTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIW--HFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKG 161 (458)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (458)
.. .........+.++.+. .+||+|++.... ..+..++...++|+|..........
T Consensus 88 ~~------~~~~~~~~~l~~~l~~----~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------------- 144 (406)
T 2gek_A 88 RL------RFGPATHRKVKKWIAE----GDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKS------------- 144 (406)
T ss_dssp ---------CCHHHHHHHHHHHHH----HCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSH-------------
T ss_pred cc------cccHHHHHHHHHHHHh----cCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhh-------------
Confidence 00 0000011122222222 479999977643 3355677778999998655421000
Q ss_pred CCCccCCCCccccCCCCCCCCCCCCCcccCCCchHHHHHHH-HHhhccCccEEEEcChhhhhHHHHHHhhhcCCC-Cccc
Q 012678 162 YLAEQDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISA-VVSKTKACSGLIWNSFEDLEQTELTRLHKDFPI-PMFP 239 (458)
Q Consensus 162 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~-pv~~ 239 (458)
...+.+.. +......++.++..|....+.- ...++. ++ .
T Consensus 145 ---------------------------------~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~-----~~~~~~~~~-v 185 (406)
T 2gek_A 145 ---------------------------------LTLSVFQGILRPYHEKIIGRIAVSDLARRWQ-----MEALGSDAV-E 185 (406)
T ss_dssp ---------------------------------HHHHHHHSTTHHHHTTCSEEEESSHHHHHHH-----HHHHSSCEE-E
T ss_pred ---------------------------------hhHHHHHHHHHHHHhhCCEEEECCHHHHHHH-----HHhcCCCcE-E
Confidence 00011110 1133467788888876544322 111122 23 4
Q ss_pred cCCccccccccCCCcccCccccchhhccCCCCcEEEEEcCcc-ccCCHHHHHHHHHHHHhC-----CCceEEEEcCCCCC
Q 012678 240 IGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSI-VVVNVTEFLEIAWGLANS-----RVPFLWVVRPGLVP 313 (458)
Q Consensus 240 vGpl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~-~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~ 313 (458)
+..-...... ...+.. .. .+++..+++..|+. .. .+.+..++++++.. +.+++ .++.+.
T Consensus 186 i~~~v~~~~~---~~~~~~---~~----~~~~~~~i~~~G~~~~~--~Kg~~~li~a~~~l~~~~~~~~l~-i~G~~~-- 250 (406)
T 2gek_A 186 IPNGVDVASF---ADAPLL---DG----YPREGRTVLFLGRYDEP--RKGMAVLLAALPKLVARFPDVEIL-IVGRGD-- 250 (406)
T ss_dssp CCCCBCHHHH---HTCCCC---TT----CSCSSCEEEEESCTTSG--GGCHHHHHHHHHHHHTTSTTCEEE-EESCSC--
T ss_pred ecCCCChhhc---CCCchh---hh----ccCCCeEEEEEeeeCcc--ccCHHHHHHHHHHHHHHCCCeEEE-EEcCCc--
Confidence 4322211100 000000 00 01123466677887 43 23344444554443 33333 333321
Q ss_pred CCcccCCCchhHHHh---hcCCcceeeccChh---hhhcCCCccccccc----cCc-hhHHHHHhhCCcccccccccchh
Q 012678 314 GVEWLEPLPKGFLEM---LDGRGHIVKWAPQQ---EVLAHPAVGGFWTH----NGW-NSTLESICEGVPMICQPCFGDQL 382 (458)
Q Consensus 314 ~~~~~~~l~~~~~~~---~~~~~~~~~~ipq~---~ll~~~~~~~~I~H----gG~-~s~~eal~~GvP~l~~P~~~DQ~ 382 (458)
. +.+.+. ..+++.+.+++|+. .++..+++ +|.- .|. +++.||+++|+|+|+.+. .
T Consensus 251 -------~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~ 316 (406)
T 2gek_A 251 -------E-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----D 316 (406)
T ss_dssp -------H-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----H
T ss_pred -------H-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----C
Confidence 1 223221 13566788999975 68899999 7643 344 599999999999998755 5
Q ss_pred hHHHHHHHHHhcceecCCcccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012678 383 VNARYVSHVWRVGLHLERKFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 383 ~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (458)
.....+.+. +.|...+. -+.+++.++|.++++| +..+++. ++..++... .-+..+.++.+.+.+++
T Consensus 317 ~~~e~i~~~-~~g~~~~~-~d~~~l~~~i~~l~~~---~~~~~~~---~~~~~~~~~-~~s~~~~~~~~~~~~~~ 382 (406)
T 2gek_A 317 AFRRVLADG-DAGRLVPV-DDADGMAAALIGILED---DQLRAGY---VARASERVH-RYDWSVVSAQIMRVYET 382 (406)
T ss_dssp HHHHHHTTT-TSSEECCT-TCHHHHHHHHHHHHHC---HHHHHHH---HHHHHHHGG-GGBHHHHHHHHHHHHHH
T ss_pred cHHHHhcCC-CceEEeCC-CCHHHHHHHHHHHHcC---HHHHHHH---HHHHHHHHH-hCCHHHHHHHHHHHHHH
Confidence 566777763 67887765 5789999999999988 4433322 222222222 34566667777666654
No 29
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.31 E-value=1.9e-11 Score=117.20 Aligned_cols=160 Identities=8% Similarity=0.102 Sum_probs=96.5
Q ss_pred CCcEEEEEcCccccCCHHHHHHHHHHHHh-----CCCceEEEEcCCCCCCCcccCCCchhHHHhh--cCCcceeeccCh-
Q 012678 270 AKSVMYVSFGSIVVVNVTEFLEIAWGLAN-----SRVPFLWVVRPGLVPGVEWLEPLPKGFLEML--DGRGHIVKWAPQ- 341 (458)
Q Consensus 270 ~~~~i~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~ipq- 341 (458)
++++++++.|...... +.+..+++|++. .+.++++..+++. .+-+.+.+.. .+++++.+++++
T Consensus 223 ~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~--------~~~~~l~~~~~~~~~v~l~~~l~~~ 293 (403)
T 3ot5_A 223 DNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLNP--------AVREKAMAILGGHERIHLIEPLDAI 293 (403)
T ss_dssp TCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSCH--------HHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCCH--------HHHHHHHHHhCCCCCEEEeCCCCHH
Confidence 5668888766432211 124555555543 2445666544321 0112222211 256778888874
Q ss_pred --hhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhccch
Q 012678 342 --QEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEAE 419 (458)
Q Consensus 342 --~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~~~ 419 (458)
..++..+++ +|+..| |.+.||+++|+|+|++|-.+++.. +.+. |.|+.+.. ++++|.++|.++++|
T Consensus 294 ~~~~l~~~ad~--vv~~SG-g~~~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~~--d~~~l~~ai~~ll~~-- 361 (403)
T 3ot5_A 294 DFHNFLRKSYL--VFTDSG-GVQEEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIGT--NKENLIKEALDLLDN-- 361 (403)
T ss_dssp HHHHHHHHEEE--EEECCH-HHHHHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECCS--CHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhcCE--EEECCc-cHHHHHHHhCCCEEEecCCCcchh----heeC-CcEEEcCC--CHHHHHHHHHHHHcC--
Confidence 458889998 998875 333799999999999976666554 2354 88876653 899999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 012678 420 GQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHI 455 (458)
Q Consensus 420 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 455 (458)
+..+++..+....+ ..++++.+.++.+.+.+
T Consensus 362 -~~~~~~m~~~~~~~----g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 362 -KESHDKMAQAANPY----GDGFAANRILAAIKSHF 392 (403)
T ss_dssp -HHHHHHHHHSCCTT----CCSCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHhhcCcc----cCCcHHHHHHHHHHHHh
Confidence 55554433322222 24555555555555443
No 30
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.30 E-value=9.1e-12 Score=119.17 Aligned_cols=162 Identities=13% Similarity=0.124 Sum_probs=98.4
Q ss_pred CCcEEEEEcCccccCCHHHHHHHHHHHHhC-----CCceEEEEcCCCCCCCcccCCCchhHHHhhc--CCcceeeccCh-
Q 012678 270 AKSVMYVSFGSIVVVNVTEFLEIAWGLANS-----RVPFLWVVRPGLVPGVEWLEPLPKGFLEMLD--GRGHIVKWAPQ- 341 (458)
Q Consensus 270 ~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ipq- 341 (458)
++++++++.|...... +.+..+++|++.. +.++++..+.+. .+.+.+.+... +++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~--------~~~~~l~~~~~~~~~v~~~g~~~~~ 274 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP--------NVREPVNRILGHVKNVILIDPQEYL 274 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH--------HHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH--------HHHHHHHHHhhcCCCEEEeCCCCHH
Confidence 4667888888765321 3455566665542 344444333210 01122222212 56778666664
Q ss_pred --hhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhccch
Q 012678 342 --QEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEAE 419 (458)
Q Consensus 342 --~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~~~ 419 (458)
.+++..+++ +|+.+| +++.||+++|+|+|+.+..++..+ +.+. |.|..++. ++++|.++|.++++|
T Consensus 275 ~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~~--d~~~la~~i~~ll~d-- 342 (384)
T 1vgv_A 275 PFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVGT--DKQRIVEEVTRLLKD-- 342 (384)
T ss_dssp HHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEECS--SHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeCC--CHHHHHHHHHHHHhC--
Confidence 458899999 999885 458899999999999987544332 3453 88887765 899999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012678 420 GQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 420 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (458)
+..+++.. +..++ .....+..+.++.+.+.+++
T Consensus 343 -~~~~~~~~---~~~~~-~~~~~~~~~i~~~~~~~~~~ 375 (384)
T 1vgv_A 343 -ENEYQAMS---RAHNP-YGDGQACSRILEALKNNRIS 375 (384)
T ss_dssp -HHHHHHHH---SSCCT-TCCSCHHHHHHHHHHHTCCC
T ss_pred -hHHHhhhh---hccCC-CcCCCHHHHHHHHHHHHHHh
Confidence 44443322 22111 11344555555555554443
No 31
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.30 E-value=1.1e-10 Score=109.67 Aligned_cols=125 Identities=12% Similarity=0.055 Sum_probs=84.4
Q ss_pred EEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChh---hhhcCCCc
Q 012678 274 MYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQ---EVLAHPAV 350 (458)
Q Consensus 274 i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~---~ll~~~~~ 350 (458)
+++..|+.. +.+.+..++++++..+.++++. +.+. ....-+.+.+...+++.+.+|+|+. .++..+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~------~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAW------EPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHA 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCC------CHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCcc------cHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCE
Confidence 345567765 4556777788888777666554 3221 0001112223344788899999975 68889998
Q ss_pred ccccc--c-----------cC-chhHHHHHhhCCcccccccccchhhHHHHHHH--HHhcceecCCcccHHHHHHHHHHH
Q 012678 351 GGFWT--H-----------NG-WNSTLESICEGVPMICQPCFGDQLVNARYVSH--VWRVGLHLERKFERREIETAIRRV 414 (458)
Q Consensus 351 ~~~I~--H-----------gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~--~~G~G~~l~~~~~~~~l~~~i~~l 414 (458)
+|. . -| -+++.||+++|+|+|+... ..+...+++ . +.|...+. +.+++.++|.++
T Consensus 235 --~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~~--d~~~l~~~i~~l 305 (342)
T 2iuy_A 235 --VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTDF--APDEARRTLAGL 305 (342)
T ss_dssp --EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSCC--CHHHHHHHHHTS
T ss_pred --EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcCC--CHHHHHHHHHHH
Confidence 663 2 33 4689999999999999865 345666665 4 56776664 999999999999
Q ss_pred hc
Q 012678 415 TV 416 (458)
Q Consensus 415 l~ 416 (458)
++
T Consensus 306 ~~ 307 (342)
T 2iuy_A 306 PA 307 (342)
T ss_dssp CC
T ss_pred HH
Confidence 96
No 32
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.28 E-value=1.8e-09 Score=103.60 Aligned_cols=347 Identities=14% Similarity=0.081 Sum_probs=175.6
Q ss_pred CCEEEEEcCCCC-cCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEecCCCCCCCccCcccHHHHHHHHHHh
Q 012678 14 GRRVILFPLPLQ-GHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEVSTENAISLLTVLNDK 92 (458)
Q Consensus 14 ~~~il~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (458)
+.++....+|.. |.-.-...|+++|.++||+|++++............++.+..++.......... . ..+...
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~--~~~~~~--- 88 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSVFQYP-P--YDLALA--- 88 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----CCCTTEEEECCCCC----CCSC-C--HHHHHH---
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccCCceEEEecccccccccccc-c--ccHHHH---
Confidence 456777777754 667778899999999999999998853222112235666665552110000000 0 000000
Q ss_pred cChhHHHHHHHHhhCCCCCCCeeEEEecCchh--hHHHHHH-Hc--CCCeEEEecchHHHHHHHHHHHHHHHhcCCCccC
Q 012678 93 CVVPFQDCLAKLISNGDQEEPVTCLITDAIWH--FAQTVAD-TL--RLPRIVLRTSSISSFLAFSAFQILLEKGYLAEQD 167 (458)
Q Consensus 93 ~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~--~~~~~A~-~l--giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 167 (458)
..+...+++ .+||+|++..... ....++. .+ ++|+|......... . ...
T Consensus 89 --~~l~~~l~~--------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~-------------~-~~~-- 142 (394)
T 2jjm_A 89 --SKMAEVAQR--------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT-------------V-LGS-- 142 (394)
T ss_dssp --HHHHHHHHH--------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH-------------T-TTT--
T ss_pred --HHHHHHHHH--------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc-------------c-cCC--
Confidence 112222222 5799999864332 2233333 33 59988765542110 0 000
Q ss_pred CCCccccCCCCCCCCCCCCCcccCCCchHHHHHHHHHhhccCccEEEEcChhhhhHHHHHHhhhcCC--CCccccCCccc
Q 012678 168 SQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDFP--IPMFPIGPFHK 245 (458)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~--~pv~~vGpl~~ 245 (458)
. ... .... ....+.++.++..|....+.- ...+. .++..+..-..
T Consensus 143 ---------------~-------~~~---~~~~---~~~~~~ad~ii~~s~~~~~~~-----~~~~~~~~~~~vi~ngv~ 189 (394)
T 2jjm_A 143 ---------------D-------PSL---NNLI---RFGIEQSDVVTAVSHSLINET-----HELVKPNKDIQTVYNFID 189 (394)
T ss_dssp ---------------C-------TTT---HHHH---HHHHHHSSEEEESCHHHHHHH-----HHHTCCSSCEEECCCCCC
T ss_pred ---------------C-------HHH---HHHH---HHHHhhCCEEEECCHHHHHHH-----HHhhCCcccEEEecCCcc
Confidence 0 000 1111 112345777888776544321 22222 23444442222
Q ss_pred cccccCCCcccCccccchhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhC----CCceEEEEcCCCCCCCcccCCC
Q 012678 246 YCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANS----RVPFLWVVRPGLVPGVEWLEPL 321 (458)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~l 321 (458)
.... ... ....+.+-+.. +++..+++..|.... .+.+..+++|++.. +.+++ .++.+. .
T Consensus 190 ~~~~---~~~-~~~~~~~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~-i~G~g~---------~ 252 (394)
T 2jjm_A 190 ERVY---FKR-DMTQLKKEYGI-SESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKLL-LVGDGP---------E 252 (394)
T ss_dssp TTTC---CCC-CCHHHHHHTTC-C---CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEEE-EECCCT---------T
T ss_pred HHhc---CCc-chHHHHHHcCC-CCCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEEE-EECCch---------H
Confidence 1110 000 11111222211 123455666787653 33444555554442 34333 333221 1
Q ss_pred chhHHHh-----hcCCcceeeccCh-hhhhcCCCccccc----cccCchhHHHHHhhCCcccccccccchhhHHHHHHHH
Q 012678 322 PKGFLEM-----LDGRGHIVKWAPQ-QEVLAHPAVGGFW----THNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHV 391 (458)
Q Consensus 322 ~~~~~~~-----~~~~~~~~~~ipq-~~ll~~~~~~~~I----~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 391 (458)
.+.+.+. ..+++.+.++..+ ..++..+++ +| .-|..+++.||+++|+|+|+.+.. .....+++.
T Consensus 253 ~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~ 326 (394)
T 2jjm_A 253 FCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQHG 326 (394)
T ss_dssp HHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCBT
T ss_pred HHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhcC
Confidence 1222211 1245677777554 568999998 87 556668999999999999998753 233444442
Q ss_pred HhcceecCCcccHHHHHHHHHHHhccch-hHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012678 392 WRVGLHLERKFERREIETAIRRVTVEAE-GQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 392 ~G~G~~l~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (458)
+.|...+. -+.+++.++|.++++|.+ ...+.+++++.. + +.-+..+.++.+++.+++
T Consensus 327 -~~g~~~~~-~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~---~----~~~s~~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 327 -DTGYLCEV-GDTTGVADQAIQLLKDEELHRNMGERARESV---Y----EQFRSEKIVSQYETIYYD 384 (394)
T ss_dssp -TTEEEECT-TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH---H----HHSCHHHHHHHHHHHHHH
T ss_pred -CceEEeCC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH---H----HhCCHHHHHHHHHHHHHH
Confidence 56777665 578999999999999831 223333333322 1 334677777777777765
No 33
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.28 E-value=1.5e-09 Score=107.67 Aligned_cols=168 Identities=13% Similarity=0.079 Sum_probs=99.7
Q ss_pred cEEEEEcCccccCCHHHHHHHHHHHHhCCC----c-eEEEEcCCCCCCCcccCCC-------chhHHH-----hhcCCcc
Q 012678 272 SVMYVSFGSIVVVNVTEFLEIAWGLANSRV----P-FLWVVRPGLVPGVEWLEPL-------PKGFLE-----MLDGRGH 334 (458)
Q Consensus 272 ~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~~l-------~~~~~~-----~~~~~~~ 334 (458)
..+++..|... +.+.+..+++|++.... . .++.++...... +....+ -+.+.+ ...+++.
T Consensus 262 ~~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~-~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~ 338 (499)
T 2r60_A 262 LPAIIASSRLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPF-EDYSRAGQEEKEILGKIIELIDNNDCRGKVS 338 (499)
T ss_dssp SCEEEECSCCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTT-TBCTTSCHHHHHHHHHHHHHHHHTTCBTTEE
T ss_pred CcEEEEeecCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcc-cccccccccchHHHHHHHHHHHhcCCCceEE
Confidence 35667778765 44556777788776521 2 344555421110 000001 122221 1236778
Q ss_pred eeeccChhh---hhcCC----Cccccccc----cCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCCccc
Q 012678 335 IVKWAPQQE---VLAHP----AVGGFWTH----NGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFE 403 (458)
Q Consensus 335 ~~~~ipq~~---ll~~~----~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 403 (458)
+.+++|+.+ ++..+ ++ +|.- |--.++.||+++|+|+|+... ......+.+. +.|..++. -+
T Consensus 339 ~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~~~-~d 410 (499)
T 2r60_A 339 MFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLVDP-ED 410 (499)
T ss_dssp EEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEECT-TC
T ss_pred ECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEeCC-CC
Confidence 899998654 77888 88 7742 224689999999999998753 3455666663 57887775 58
Q ss_pred HHHHHHHHHHHhccch-hHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012678 404 RREIETAIRRVTVEAE-GQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 404 ~~~l~~~i~~ll~~~~-~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (458)
++++.++|.++++|.+ ...+.+++++... +.-+..+.++++++.+++
T Consensus 411 ~~~la~~i~~ll~~~~~~~~~~~~a~~~~~-------~~fs~~~~~~~~~~~y~~ 458 (499)
T 2r60_A 411 PEDIARGLLKAFESEETWSAYQEKGKQRVE-------ERYTWQETARGYLEVIQE 458 (499)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHHH-------HHSBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHH
Confidence 9999999999999832 2233333333222 223456666666665543
No 34
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.27 E-value=4.4e-11 Score=114.05 Aligned_cols=134 Identities=10% Similarity=0.081 Sum_probs=86.1
Q ss_pred CCcEEEEEcCccccCCHHHHHHHHHHHHhC-----CCceEEEEcCCCCCCCcccCCCchhHHHhh--cCCcceeeccCh-
Q 012678 270 AKSVMYVSFGSIVVVNVTEFLEIAWGLANS-----RVPFLWVVRPGLVPGVEWLEPLPKGFLEML--DGRGHIVKWAPQ- 341 (458)
Q Consensus 270 ~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~ipq- 341 (458)
++++|+++.|...... .+..+++|++.. +..+++..+.+. .+-+.+.+.. .+++.+.+++++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~--------~~~~~l~~~~~~~~~v~~~g~~g~~ 266 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP--------VVREAVFPVLKGVRNFVLLDPLEYG 266 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH--------HHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH--------HHHHHHHHHhccCCCEEEECCCCHH
Confidence 4567788887653321 345566665542 344444434221 0112222221 246778866655
Q ss_pred --hhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhccch
Q 012678 342 --QEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEAE 419 (458)
Q Consensus 342 --~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~~~ 419 (458)
..++..+++ +|+++| |.+.||+++|+|+|+.+..+++... .+. |.|..+. .++++|.++|.++++|
T Consensus 267 ~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~--~d~~~la~~i~~ll~d-- 334 (376)
T 1v4v_A 267 SMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKA-GILKLAG--TDPEGVYRVVKGLLEN-- 334 (376)
T ss_dssp HHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEECC--SCHHHHHHHHHHHHTC--
T ss_pred HHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcC-CceEECC--CCHHHHHHHHHHHHhC--
Confidence 478999999 999884 5566999999999998876666652 343 8887775 3899999999999998
Q ss_pred hHHHHHH
Q 012678 420 GQEMRER 426 (458)
Q Consensus 420 ~~~~~~~ 426 (458)
+..+++
T Consensus 335 -~~~~~~ 340 (376)
T 1v4v_A 335 -PEELSR 340 (376)
T ss_dssp -HHHHHH
T ss_pred -hHhhhh
Confidence 544443
No 35
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.26 E-value=2.3e-09 Score=101.87 Aligned_cols=132 Identities=16% Similarity=0.238 Sum_probs=88.2
Q ss_pred CCcEEEEEcCccccCCHHHHHHHHHHHHhCCC----c-eEEEEcCCCCCCCcccCCCchhHHHh--hcCCcceeeccCh-
Q 012678 270 AKSVMYVSFGSIVVVNVTEFLEIAWGLANSRV----P-FLWVVRPGLVPGVEWLEPLPKGFLEM--LDGRGHIVKWAPQ- 341 (458)
Q Consensus 270 ~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~ipq- 341 (458)
++..+++..|+.. +.+.+..++++++.... . -++.++.+. ...+. ...+. ..+++.+.++..+
T Consensus 194 ~~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~------~~~~~-~~~~~~~~~~~v~~~g~~~~~ 264 (374)
T 2iw1_A 194 EQQNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQDK------PRKFE-ALAEKLGVRSNVHFFSGRNDV 264 (374)
T ss_dssp TTCEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC------CHHHH-HHHHHHTCGGGEEEESCCSCH
T ss_pred CCCeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEEEEcCCC------HHHHH-HHHHHcCCCCcEEECCCcccH
Confidence 3456777778765 34556677788877532 2 233344321 00011 11111 2356677787654
Q ss_pred hhhhcCCCcccccc----ccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhcc
Q 012678 342 QEVLAHPAVGGFWT----HNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 417 (458)
Q Consensus 342 ~~ll~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 417 (458)
..++..+++ +|. -|..+++.||+++|+|+|+... ..+...+++. +.|..+...-+.+++.++|.++++|
T Consensus 265 ~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~~~~~~~l~~~i~~l~~~ 337 (374)
T 2iw1_A 265 SELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAEPFSQEQLNEVLRKALTQ 337 (374)
T ss_dssp HHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECSSCCHHHHHHHHHHHHHC
T ss_pred HHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCCCCCHHHHHHHHHHHHcC
Confidence 558889998 775 4567899999999999999765 3556778874 8898887335899999999999988
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.25 E-value=1.2e-10 Score=110.93 Aligned_cols=161 Identities=11% Similarity=0.123 Sum_probs=96.3
Q ss_pred CCcEEEEEcCccccCCHHHHHHHHHHHHhC-----CCceEEEEcCCCCCCCcccCCCchhHHHhhc--CCcceeeccChh
Q 012678 270 AKSVMYVSFGSIVVVNVTEFLEIAWGLANS-----RVPFLWVVRPGLVPGVEWLEPLPKGFLEMLD--GRGHIVKWAPQQ 342 (458)
Q Consensus 270 ~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ipq~ 342 (458)
++++++++.|..... .+.+..+++|++.. +.++++ +.+. . ..+-+.+.+... +++.+.+++++.
T Consensus 204 ~~~~vl~~~gr~~~~-~K~~~~li~a~~~l~~~~~~~~~i~--~~g~--~----~~~~~~~~~~~~~~~~v~~~g~~~~~ 274 (375)
T 3beo_A 204 NNRLVLMTAHRRENL-GEPMRNMFRAIKRLVDKHEDVQVVY--PVHM--N----PVVRETANDILGDYGRIHLIEPLDVI 274 (375)
T ss_dssp TSEEEEEECCCGGGT-THHHHHHHHHHHHHHHHCTTEEEEE--ECCS--C----HHHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCeEEEEecccccc-hhHHHHHHHHHHHHHhhCCCeEEEE--eCCC--C----HHHHHHHHHHhhccCCEEEeCCCCHH
Confidence 456777888875432 14466677776543 334333 3221 0 001122222223 577887777754
Q ss_pred ---hhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhccch
Q 012678 343 ---EVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEAE 419 (458)
Q Consensus 343 ---~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~~~ 419 (458)
.++..+++ +|+.+| +++.||+++|+|+|+....+.. .. +.+. |.|..++. ++++|.++|.++++|
T Consensus 275 ~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~---~e-~v~~-g~g~~v~~--d~~~la~~i~~ll~~-- 342 (375)
T 3beo_A 275 DFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER---PE-GIEA-GTLKLAGT--DEETIFSLADELLSD-- 342 (375)
T ss_dssp HHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC---HH-HHHT-TSEEECCS--CHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC---ce-eecC-CceEEcCC--CHHHHHHHHHHHHhC--
Confidence 58889999 998874 5688999999999998643333 22 3343 88887764 899999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012678 420 GQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHIL 456 (458)
Q Consensus 420 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 456 (458)
+..+++..+-+.++ ....+..+.++.+.+.++
T Consensus 343 -~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 343 -KEAHDKMSKASNPY----GDGRASERIVEAILKHFN 374 (375)
T ss_dssp -HHHHHHHCCCCCTT----CCSCHHHHHHHHHHHHTT
T ss_pred -hHhHhhhhhcCCCC----CCCcHHHHHHHHHHHHhh
Confidence 55444322211111 134555555666655543
No 37
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.22 E-value=3.5e-11 Score=115.26 Aligned_cols=158 Identities=10% Similarity=0.091 Sum_probs=95.1
Q ss_pred CCcEEEEEcCccccCCHHHHHHHHHHHHhC-----CCceEEEEcCCCCCCCcccCCCchhHHHh--hcCCcceeeccCh-
Q 012678 270 AKSVMYVSFGSIVVVNVTEFLEIAWGLANS-----RVPFLWVVRPGLVPGVEWLEPLPKGFLEM--LDGRGHIVKWAPQ- 341 (458)
Q Consensus 270 ~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~ipq- 341 (458)
++++|+++.+-..... +.+..+++|++.. +.++++.++.+. + +-+.+.+. ..+++++.+++++
T Consensus 229 ~~~~vlv~~hR~~~~~-~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~----~----~~~~l~~~~~~~~~v~~~~~lg~~ 299 (396)
T 3dzc_A 229 SKKLILVTGHRRESFG-GGFERICQALITTAEQHPECQILYPVHLNP----N----VREPVNKLLKGVSNIVLIEPQQYL 299 (396)
T ss_dssp TSEEEEEECSCBCCCT-THHHHHHHHHHHHHHHCTTEEEEEECCBCH----H----HHHHHHHHTTTCTTEEEECCCCHH
T ss_pred CCCEEEEEECCcccch-hHHHHHHHHHHHHHHhCCCceEEEEeCCCh----H----HHHHHHHHHcCCCCEEEeCCCCHH
Confidence 4677877763222211 2355666666543 445565544321 0 11222221 1246778777753
Q ss_pred --hhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhccch
Q 012678 342 --QEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEAE 419 (458)
Q Consensus 342 --~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~~~ 419 (458)
..++..+++ +|+-+| |.+.||+++|+|+|+..-..+++ . +.+. |.++.+.. ++++|.++|.++++|
T Consensus 300 ~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~---e-~v~~-G~~~lv~~--d~~~l~~ai~~ll~d-- 367 (396)
T 3dzc_A 300 PFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP---E-AVAA-GTVKLVGT--NQQQICDALSLLLTD-- 367 (396)
T ss_dssp HHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH---H-HHHH-TSEEECTT--CHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch---H-HHHc-CceEEcCC--CHHHHHHHHHHHHcC--
Confidence 458889999 999988 66689999999999985555543 2 3443 87765543 799999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012678 420 GQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 420 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (458)
+..+++..+.... -+..++.+++++.|.|
T Consensus 368 -~~~~~~m~~~~~~--------~~~~~aa~ri~~~l~~ 396 (396)
T 3dzc_A 368 -PQAYQAMSQAHNP--------YGDGKACQRIADILAK 396 (396)
T ss_dssp -HHHHHHHHTSCCT--------TCCSCHHHHHHHHHHC
T ss_pred -HHHHHHHhhccCC--------CcCChHHHHHHHHHhC
Confidence 5555433332211 2334556666666653
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.08 E-value=3.3e-09 Score=102.50 Aligned_cols=111 Identities=13% Similarity=0.073 Sum_probs=76.5
Q ss_pred CCcceeeccC---h---hhhhcCCCcccccccc----CchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCC
Q 012678 331 GRGHIVKWAP---Q---QEVLAHPAVGGFWTHN----GWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLER 400 (458)
Q Consensus 331 ~~~~~~~~ip---q---~~ll~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~ 400 (458)
+++.+.+|++ + ..++..+++ +|.-. ..+++.||+++|+|+|+.+. ..+...+++. +.|...+
T Consensus 293 ~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~- 364 (416)
T 2x6q_A 293 YDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR- 364 (416)
T ss_dssp TTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES-
T ss_pred CcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC-
Confidence 5778888776 2 347888888 77544 45789999999999999764 4556666663 6777765
Q ss_pred cccHHHHHHHHHHHhccch-hHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhcC
Q 012678 401 KFERREIETAIRRVTVEAE-GQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILSF 458 (458)
Q Consensus 401 ~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 458 (458)
+.+++.++|.++++|.+ ...+.+++++. ++ +.-+..+.++++++.++++
T Consensus 365 --d~~~la~~i~~ll~~~~~~~~~~~~a~~~---~~----~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 365 --DANEAVEVVLYLLKHPEVSKEMGAKAKER---VR----KNFIITKHMERYLDILNSL 414 (416)
T ss_dssp --SHHHHHHHHHHHHHCHHHHHHHHHHHHHH---HH----HHTBHHHHHHHHHHHHHTC
T ss_pred --CHHHHHHHHHHHHhCHHHHHHHHHHHHHH---HH----HHcCHHHHHHHHHHHHHHh
Confidence 88999999999999821 12223333322 22 3346777788888877653
No 39
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.94 E-value=2.3e-08 Score=102.98 Aligned_cols=168 Identities=13% Similarity=0.079 Sum_probs=93.7
Q ss_pred CcEEEEEcCccccCCHHHHHHHHHHHHhCC-----CceEEEEcCCCCCCCcccC--CCchhHH---Hh--hcCCcceeec
Q 012678 271 KSVMYVSFGSIVVVNVTEFLEIAWGLANSR-----VPFLWVVRPGLVPGVEWLE--PLPKGFL---EM--LDGRGHIVKW 338 (458)
Q Consensus 271 ~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~~~~~~~~--~l~~~~~---~~--~~~~~~~~~~ 338 (458)
+..+++..|... +.+.+..+++|++... .+++++-++.. ......+ ...+.+. ++ +.+++.+.++
T Consensus 571 ~~~vIl~vGRl~--~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~-~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~ 647 (816)
T 3s28_A 571 KKPILFTMARLD--RVKNLSGLVEWYGKNTRLRELANLVVVGGDRR-KESKDNEEKAEMKKMYDLIEEYKLNGQFRWISS 647 (816)
T ss_dssp TSCEEEEECCCC--TTTTHHHHHHHHHHCHHHHHHCEEEEECCCTT-SCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECC
T ss_pred CCeEEEEEccCc--ccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCc-ccccchhhHHHHHHHHHHHHHcCCCCcEEEccC
Confidence 445677778866 4555677777776652 34444332221 0000000 0001111 11 2356677764
Q ss_pred ----cChhhhhc----CCCccccccc----cCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCCcccHHH
Q 012678 339 ----APQQEVLA----HPAVGGFWTH----NGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERRE 406 (458)
Q Consensus 339 ----ipq~~ll~----~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 406 (458)
+|+.++.. .+++ +|.- |-..++.||+++|+|+|+. |-......+.+. +.|..++. -++++
T Consensus 648 ~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p-~D~e~ 719 (816)
T 3s28_A 648 QMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDP-YHGDQ 719 (816)
T ss_dssp CCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECT-TSHHH
T ss_pred ccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCC-CCHHH
Confidence 44455443 4566 7743 3347999999999999986 444556666663 67888776 57899
Q ss_pred HHHHHHHHh----ccch-hHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012678 407 IETAIRRVT----VEAE-GQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHIL 456 (458)
Q Consensus 407 l~~~i~~ll----~~~~-~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 456 (458)
++++|.+++ +|.+ ...+.+++++.. .+.-+-...++++++...
T Consensus 720 LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a-------~~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 720 AADTLADFFTKCKEDPSHWDEISKGGLQRI-------EEKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp HHHHHHHHHHHHHHCTHHHHHHHHHHHHHH-------HHSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHH-------HHhCCHHHHHHHHHHHHH
Confidence 999997776 6621 223333333322 134556666666666543
No 40
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.80 E-value=2.7e-07 Score=88.89 Aligned_cols=166 Identities=11% Similarity=0.036 Sum_probs=95.8
Q ss_pred CcEEEEEcCccccCCHHHHHHHHHHHHh-----CCCceEEEEcCCCCCCCcccCCCchhHHH---h--hcCC-------c
Q 012678 271 KSVMYVSFGSIVVVNVTEFLEIAWGLAN-----SRVPFLWVVRPGLVPGVEWLEPLPKGFLE---M--LDGR-------G 333 (458)
Q Consensus 271 ~~~i~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~l~~~~~~---~--~~~~-------~ 333 (458)
+..+++..|.... .+.+..+++|++. .+.+++++-.+..... ..+.+.+.+ . ..++ +
T Consensus 183 ~~~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~----~~l~~~~~~~~~~~~l~~~v~~l~~vv 256 (413)
T 3oy2_A 183 DDVLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESK----FDLHSIALRELVASGVDNVFTHLNKIM 256 (413)
T ss_dssp TSEEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCS----CCHHHHHHHHHHHHTCSCHHHHHTTEE
T ss_pred CceEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccch----hhHHHHHHHHHHHcCccccccccccee
Confidence 4577778888653 3445555555554 2456655544332100 001122221 1 2222 4
Q ss_pred ceeeccChhh---hhcCCCcccccc----ccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhc------------
Q 012678 334 HIVKWAPQQE---VLAHPAVGGFWT----HNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRV------------ 394 (458)
Q Consensus 334 ~~~~~ipq~~---ll~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~------------ 394 (458)
.+.+|+|+.+ ++..+++ +|. -|...++.||+++|+|+|+... ......+.+. ..
T Consensus 257 ~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 257 INRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSGD-CVYKIKPSAWISVD 329 (413)
T ss_dssp EECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCTT-TSEEECCCEEEECT
T ss_pred eccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHccC-cccccccccccccc
Confidence 4569999544 7888888 773 2334689999999999998653 3444555441 22
Q ss_pred ---ce--ecCCcccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012678 395 ---GL--HLERKFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 395 ---G~--~l~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (458)
|. .+.. -+++++.++| ++++| +..+++ +++..++...+.-+.++.++++.+.+++
T Consensus 330 ~~~G~~gl~~~-~d~~~la~~i-~l~~~---~~~~~~---~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 330 DRDGIGGIEGI-IDVDDLVEAF-TFFKD---EKNRKE---YGKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp TTCSSCCEEEE-CCHHHHHHHH-HHTTS---HHHHHH---HHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred cccCcceeeCC-CCHHHHHHHH-HHhcC---HHHHHH---HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 54 4443 4899999999 99998 444332 2222222222455777777777777654
No 41
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.78 E-value=1.1e-08 Score=97.02 Aligned_cols=128 Identities=12% Similarity=0.061 Sum_probs=82.6
Q ss_pred CcEEEEEcCccccC-CHHHHHHHHHHHHhC----CCceEEEEcCCCCCCCcccCCCchhHHHh---h--cCCcceeeccC
Q 012678 271 KSVMYVSFGSIVVV-NVTEFLEIAWGLANS----RVPFLWVVRPGLVPGVEWLEPLPKGFLEM---L--DGRGHIVKWAP 340 (458)
Q Consensus 271 ~~~i~vs~Gs~~~~-~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~---~--~~~~~~~~~ip 340 (458)
++.|+++.|..... ..+.+..+++|+... +..+|+...+. +.+.+.+. . .+|+++.+.++
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~----------~~~~l~~~~~~~~~~~~v~l~~~lg 272 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR----------TKKRLEDLEGFKELGDKIRFLPAFS 272 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH----------HHHHHHTSGGGGGTGGGEEECCCCC
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH----------HHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 56889988875432 234566777776653 46667655421 11111111 1 13456655554
Q ss_pred ---hhhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhcc
Q 012678 341 ---QQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 417 (458)
Q Consensus 341 ---q~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 417 (458)
...++.++++ +|+-.|. .+.||.+.|+|+|.++...+-+. . .++ |.++.+. .++++|.+++.++++|
T Consensus 273 ~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~-v~~-G~~~lv~--~d~~~i~~ai~~ll~d 342 (385)
T 4hwg_A 273 FTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---G-MDA-GTLIMSG--FKAERVLQAVKTITEE 342 (385)
T ss_dssp HHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---H-HHH-TCCEECC--SSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---h-hhc-CceEEcC--CCHHHHHHHHHHHHhC
Confidence 4568999999 9999875 46999999999999986544222 2 443 8776654 3899999999999988
Q ss_pred c
Q 012678 418 A 418 (458)
Q Consensus 418 ~ 418 (458)
+
T Consensus 343 ~ 343 (385)
T 4hwg_A 343 H 343 (385)
T ss_dssp C
T ss_pred h
Confidence 3
No 42
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.63 E-value=1.1e-06 Score=84.42 Aligned_cols=73 Identities=11% Similarity=0.015 Sum_probs=56.0
Q ss_pred CCcceeeccChhh---hhcCCCcccccc---ccC-chhHHHHH-------hhCCcccccccccchhhHHHHHHHHHhcce
Q 012678 331 GRGHIVKWAPQQE---VLAHPAVGGFWT---HNG-WNSTLESI-------CEGVPMICQPCFGDQLVNARYVSHVWRVGL 396 (458)
Q Consensus 331 ~~~~~~~~ipq~~---ll~~~~~~~~I~---HgG-~~s~~eal-------~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~ 396 (458)
+|+.+.+++|+.+ ++..+++ +|. +-| .+++.||+ ++|+|+|+... +.+. ..|.
T Consensus 265 ~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~ 331 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSR 331 (406)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSE
T ss_pred CCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceE
Confidence 4458899999654 7888998 664 234 46789999 99999999865 5553 5677
Q ss_pred e-cCCcccHHHHHHHHHHHhcc
Q 012678 397 H-LERKFERREIETAIRRVTVE 417 (458)
Q Consensus 397 ~-l~~~~~~~~l~~~i~~ll~~ 417 (458)
. +.. -+++++.++|.+++++
T Consensus 332 l~v~~-~d~~~la~ai~~ll~~ 352 (406)
T 2hy7_A 332 FGYTP-GNADSVIAAITQALEA 352 (406)
T ss_dssp EEECT-TCHHHHHHHHHHHHHC
T ss_pred EEeCC-CCHHHHHHHHHHHHhC
Confidence 6 564 5899999999999987
No 43
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.62 E-value=1.8e-06 Score=85.00 Aligned_cols=157 Identities=11% Similarity=0.006 Sum_probs=92.7
Q ss_pred EEEEEcCccccCCHHHHHHHHHHHHh---CCCceEEEEcCCCCCCCcccCCCchhHH---HhhcCCcc-eeeccChh---
Q 012678 273 VMYVSFGSIVVVNVTEFLEIAWGLAN---SRVPFLWVVRPGLVPGVEWLEPLPKGFL---EMLDGRGH-IVKWAPQQ--- 342 (458)
Q Consensus 273 ~i~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~-~~~~ipq~--- 342 (458)
.+++..|.... .+.+..+++|++. .+.+++++-.+.. ..-+.+. +..++++. +.++ +..
T Consensus 292 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~--------~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~ 360 (485)
T 1rzu_A 292 PLFCVISRLTW--QKGIDLMAEAVDEIVSLGGRLVVLGAGDV--------ALEGALLAAASRHHGRVGVAIGY-NEPLSH 360 (485)
T ss_dssp CEEEEESCBST--TTTHHHHHTTHHHHHHTTCEEEEEECBCH--------HHHHHHHHHHHHTTTTEEEEESC-CHHHHH
T ss_pred eEEEEEccCcc--ccCHHHHHHHHHHHHhcCceEEEEeCCch--------HHHHHHHHHHHhCCCcEEEecCC-CHHHHH
Confidence 46777888764 3344445554443 3555555433210 0112222 22335666 5677 543
Q ss_pred hhhcCCCccccccc----cCchhHHHHHhhCCcccccccccchhhHHHHHHHHH---------hcceecCCcccHHHHHH
Q 012678 343 EVLAHPAVGGFWTH----NGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVW---------RVGLHLERKFERREIET 409 (458)
Q Consensus 343 ~ll~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~~~l~~ 409 (458)
.++..+++ +|.- |.-.++.||+++|+|+|+... ......+.+ - +.|..++. -+++++.+
T Consensus 361 ~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-~d~~~la~ 432 (485)
T 1rzu_A 361 LMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFSP-VTLDGLKQ 432 (485)
T ss_dssp HHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEESS-CSHHHHHH
T ss_pred HHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeCC-CCHHHHHH
Confidence 57888998 7732 335689999999999999754 344444543 2 36777765 57899999
Q ss_pred HHHHHh---ccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012678 410 AIRRVT---VEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 410 ~i~~ll---~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (458)
+|.+++ +| +..+++. ++..++ +.-+..+.++++++..++
T Consensus 433 ~i~~ll~~~~~---~~~~~~~---~~~~~~---~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 433 AIRRTVRYYHD---PKLWTQM---QKLGMK---SDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp HHHHHHHHHTC---HHHHHHH---HHHHHT---CCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCC---HHHHHHH---HHHHHH---HhCChHHHHHHHHHHHHH
Confidence 999999 66 4433322 222221 345666777777666543
No 44
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.62 E-value=7.9e-06 Score=82.10 Aligned_cols=116 Identities=8% Similarity=0.046 Sum_probs=76.0
Q ss_pred CCcceeeccChh---hhhcCCCcccccc---ccCchhHHHHHhhCCcccccccccchhhH-HHHHHHHHhcceecCCccc
Q 012678 331 GRGHIVKWAPQQ---EVLAHPAVGGFWT---HNGWNSTLESICEGVPMICQPCFGDQLVN-ARYVSHVWRVGLHLERKFE 403 (458)
Q Consensus 331 ~~~~~~~~ipq~---~ll~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~~n-a~~v~~~~G~G~~l~~~~~ 403 (458)
+++.+.+++|+. .++..+++ +|. .|+.+++.||+++|+|+|++|-..=.... +..+.. .|+...+.. +
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~~--~ 508 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNVA--D 508 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBCS--S
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhcC--C
Confidence 566888999854 46888888 762 26678999999999999997753211222 345555 477665554 8
Q ss_pred HHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH--hhCCChHHHHHHHHHHHhc
Q 012678 404 RREIETAIRRVTVEAEGQEMRERIMHLKEKLELSL--LEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 404 ~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~ 457 (458)
++++.++|.++++| +..+++. ++..++.. .+.-+....++.+.+.+++
T Consensus 509 ~~~la~~i~~l~~~---~~~~~~~---~~~~~~~~~~~~~f~~~~~~~~~~~~y~~ 558 (568)
T 2vsy_A 509 DAAFVAKAVALASD---PAALTAL---HARVDVLRRASGVFHMDGFADDFGALLQA 558 (568)
T ss_dssp HHHHHHHHHHHHHC---HHHHHHH---HHHHHHHHHHSSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC---HHHHHHH---HHHHHHhhhcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999998 4443322 22222222 2445666666766665543
No 45
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.60 E-value=2e-06 Score=84.64 Aligned_cols=160 Identities=13% Similarity=0.045 Sum_probs=93.8
Q ss_pred CcEEEEEcCccccCCHHHHHHHHHHHHhC---CCceEEEEcCCCCCCCcccCCCchhHH---HhhcCCcc-eeeccCh--
Q 012678 271 KSVMYVSFGSIVVVNVTEFLEIAWGLANS---RVPFLWVVRPGLVPGVEWLEPLPKGFL---EMLDGRGH-IVKWAPQ-- 341 (458)
Q Consensus 271 ~~~i~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~i~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~-~~~~ipq-- 341 (458)
+..+++..|.... .+.+..+++|++.. +.+++++-.+.. ...+.+. ....+++. +.++...
T Consensus 291 ~~~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~--------~~~~~l~~~~~~~~~~v~~~~g~~~~~~ 360 (485)
T 2qzs_A 291 KVPLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGDP--------VLQEGFLAAAAEYPGQVGVQIGYHEAFS 360 (485)
T ss_dssp TSCEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEECH--------HHHHHHHHHHHHSTTTEEEEESCCHHHH
T ss_pred CCeEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCch--------HHHHHHHHHHHhCCCcEEEeCCCCHHHH
Confidence 3456666777653 34455555555543 555554433210 0112222 22335665 5677332
Q ss_pred hhhhcCCCccccccc----cCchhHHHHHhhCCcccccccccchhhHHHHHHHHH---------hcceecCCcccHHHHH
Q 012678 342 QEVLAHPAVGGFWTH----NGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVW---------RVGLHLERKFERREIE 408 (458)
Q Consensus 342 ~~ll~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~~~l~ 408 (458)
..++..+++ +|.- |.-.++.||+++|+|+|+... ..+...+.+ - +.|..++. -+++++.
T Consensus 361 ~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-~d~~~la 432 (485)
T 2qzs_A 361 HRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFED-SNAWSLL 432 (485)
T ss_dssp HHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEECS-SSHHHHH
T ss_pred HHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEECC-CCHHHHH
Confidence 257889998 7733 334689999999999998754 344454543 2 36777665 5899999
Q ss_pred HHHHHHh---ccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012678 409 TAIRRVT---VEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 409 ~~i~~ll---~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (458)
++|.+++ +| +..+++.. +..++ +.-+-.+.++++++.+++
T Consensus 433 ~~i~~ll~~~~~---~~~~~~~~---~~~~~---~~fs~~~~~~~~~~ly~~ 475 (485)
T 2qzs_A 433 RAIRRAFVLWSR---PSLWRFVQ---RQAMA---MDFSWQVAAKSYRELYYR 475 (485)
T ss_dssp HHHHHHHHHHTS---HHHHHHHH---HHHHH---CCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC---HHHHHHHH---HHHHh---hcCCHHHHHHHHHHHHHH
Confidence 9999999 66 44333222 22221 455677777777776654
No 46
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.54 E-value=1.5e-07 Score=79.13 Aligned_cols=128 Identities=10% Similarity=0.052 Sum_probs=87.2
Q ss_pred EEEEEcCccccCCHHHHHHHHHHHHhC-CCceEEEEcCCCCCCCcccCCCchhHH---HhhcCCcceeeccCh---hhhh
Q 012678 273 VMYVSFGSIVVVNVTEFLEIAWGLANS-RVPFLWVVRPGLVPGVEWLEPLPKGFL---EMLDGRGHIVKWAPQ---QEVL 345 (458)
Q Consensus 273 ~i~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~ipq---~~ll 345 (458)
.+++..|+.. ..+.+..++++++.. +.++++.-.+.. ...+-+.+. ....+|+.+.+|+|+ ..++
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~~------~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~ 95 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSK------GDHAERYARKIMKIAPDNVKFLGSVSEEELIDLY 95 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCT------TSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCcc------HHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHH
Confidence 3455667765 445577788888877 455555433221 111222221 124468889999997 5588
Q ss_pred cCCCcccccc---ccCc-hhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhcc
Q 012678 346 AHPAVGGFWT---HNGW-NSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 417 (458)
Q Consensus 346 ~~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 417 (458)
..+++ +|. +.|+ .++.||+++|+|+|+.. ...+...+++. +.|..+ . -+.+++.++|.++++|
T Consensus 96 ~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~-~-~d~~~l~~~i~~l~~~ 162 (177)
T 2f9f_A 96 SRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINE-KTGYLV-N-ADVNEIIDAMKKVSKN 162 (177)
T ss_dssp HHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBT-TTEEEE-C-SCHHHHHHHHHHHHHC
T ss_pred HhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCC-CccEEe-C-CCHHHHHHHHHHHHhC
Confidence 89998 776 3344 59999999999999875 35566666663 678777 3 6899999999999987
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.38 E-value=2.1e-05 Score=74.40 Aligned_cols=96 Identities=16% Similarity=0.191 Sum_probs=69.7
Q ss_pred cceeeccCh-hhhhcCCCccccccc-----cCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCCcccHHH
Q 012678 333 GHIVKWAPQ-QEVLAHPAVGGFWTH-----NGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERRE 406 (458)
Q Consensus 333 ~~~~~~ipq-~~ll~~~~~~~~I~H-----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 406 (458)
+++.++... ..++..+++ ++.- +|..++.||+++|+|+|.-|..++..+....+.+. |.++... ++++
T Consensus 262 v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~---d~~~ 335 (374)
T 2xci_A 262 VILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK---NETE 335 (374)
T ss_dssp EEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC---SHHH
T ss_pred EEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC---CHHH
Confidence 344454443 558888887 6642 23478999999999999877777777777666553 7776553 6899
Q ss_pred HHHHHHHHhccch-hHHHHHHHHHHHHHHH
Q 012678 407 IETAIRRVTVEAE-GQEMRERIMHLKEKLE 435 (458)
Q Consensus 407 l~~~i~~ll~~~~-~~~~~~~a~~~~~~~~ 435 (458)
|.++|.++++| + ...+.+++++..++-.
T Consensus 336 La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 336 LVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp HHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 99999999987 5 5678888877765544
No 48
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.92 E-value=0.00032 Score=72.05 Aligned_cols=136 Identities=17% Similarity=0.189 Sum_probs=93.7
Q ss_pred CCCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhh------cCCcceeeccChh
Q 012678 269 AAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEML------DGRGHIVKWAPQQ 342 (458)
Q Consensus 269 ~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~ipq~ 342 (458)
+++.++|.||.+..-..++.+....+-|++.+.-++|....... .-+++.... ++++++.+..|..
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~--------~~~~l~~~~~~~gi~~~r~~f~~~~~~~ 591 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV--------GEPNIQQYAQNMGLPQNRIIFSPVAPKE 591 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG--------GHHHHHHHHHHTTCCGGGEEEEECCCHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH--------HHHHHHHHHHhcCCCcCeEEECCCCCHH
Confidence 45679999998887799999999999999998888898765431 112222211 1455677888865
Q ss_pred h---hhcCCCcccccc---ccCchhHHHHHhhCCcccccccccchhhH-HHHHHHHHhcceecCCcccHHHHHHHHHHHh
Q 012678 343 E---VLAHPAVGGFWT---HNGWNSTLESICEGVPMICQPCFGDQLVN-ARYVSHVWRVGLHLERKFERREIETAIRRVT 415 (458)
Q Consensus 343 ~---ll~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~~n-a~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll 415 (458)
+ .+..+|+ ++- .+|.+|+.|||+.|||+|.++-..=--.. +..+.. +|+.-.+. -+.++-.+.-.++-
T Consensus 592 ~~l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia--~~~~~Y~~~a~~la 666 (723)
T 4gyw_A 592 EHVRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIA--KNRQEYEDIAVKLG 666 (723)
T ss_dssp HHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBC--SSHHHHHHHHHHHH
T ss_pred HHHHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCccccc--CCHHHHHHHHHHHh
Confidence 5 4455666 765 78999999999999999999943222222 344444 57765554 36777666666666
Q ss_pred cc
Q 012678 416 VE 417 (458)
Q Consensus 416 ~~ 417 (458)
+|
T Consensus 667 ~d 668 (723)
T 4gyw_A 667 TD 668 (723)
T ss_dssp HC
T ss_pred cC
Confidence 66
No 49
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.90 E-value=3.3e-05 Score=63.66 Aligned_cols=140 Identities=14% Similarity=0.169 Sum_probs=83.0
Q ss_pred cEEEEEcCccccCCHHHHHHHHHHHHhCCC--ceEEEEcCCCCCCCcccCCCchhHH---HhhcCCcceeeccChhh---
Q 012678 272 SVMYVSFGSIVVVNVTEFLEIAWGLANSRV--PFLWVVRPGLVPGVEWLEPLPKGFL---EMLDGRGHIVKWAPQQE--- 343 (458)
Q Consensus 272 ~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~--~~i~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~ipq~~--- 343 (458)
+++++..|+.. +.+.+..++++++.... .+-+.+-+.. ...+.+. +....++.+ +|+|+.+
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g--------~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~ 70 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGKG--------PDEKKIKLLAQKLGVKAEF-GFVNSNELLE 70 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECCS--------TTHHHHHHHHHHHTCEEEC-CCCCHHHHHH
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeCC--------ccHHHHHHHHHHcCCeEEE-eecCHHHHHH
Confidence 56778888875 44557777788877531 2333332221 0122222 222335667 9998644
Q ss_pred hhcCCCcccccc----ccCchhHHHHHhhCC-cccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhccc
Q 012678 344 VLAHPAVGGFWT----HNGWNSTLESICEGV-PMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEA 418 (458)
Q Consensus 344 ll~~~~~~~~I~----HgG~~s~~eal~~Gv-P~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~~ 418 (458)
++..+++ +|. -|...++.||+++|+ |+|+....+. ....+.+. +. .+.. -+.+++.++|.++++|.
T Consensus 71 ~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~~~~-~~--~~~~-~~~~~l~~~i~~l~~~~ 141 (166)
T 3qhp_A 71 ILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFALDE-RS--LFEP-NNAKDLSAKIDWWLENK 141 (166)
T ss_dssp HHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGCSSG-GG--EECT-TCHHHHHHHHHHHHHCH
T ss_pred HHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhccCC-ce--EEcC-CCHHHHHHHHHHHHhCH
Confidence 7888888 775 233469999999996 9999432221 22222332 33 2232 58999999999999983
Q ss_pred h-hHHHHHHHHHHH
Q 012678 419 E-GQEMRERIMHLK 431 (458)
Q Consensus 419 ~-~~~~~~~a~~~~ 431 (458)
+ ...+.+++++..
T Consensus 142 ~~~~~~~~~~~~~~ 155 (166)
T 3qhp_A 142 LERERMQNEYAKSA 155 (166)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 2 344555555544
No 50
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.77 E-value=0.00024 Score=60.38 Aligned_cols=77 Identities=13% Similarity=0.120 Sum_probs=59.4
Q ss_pred Ccce-eeccChh---hhhcCCCcccccccc---C-chhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCCccc
Q 012678 332 RGHI-VKWAPQQ---EVLAHPAVGGFWTHN---G-WNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFE 403 (458)
Q Consensus 332 ~~~~-~~~ipq~---~ll~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 403 (458)
++.+ .+++++. .++..+++ +|.-. | ..++.||+++|+|+|+... ......+ +. +.|...+. -+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~-~~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA-GD 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT-TC
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC-CC
Confidence 7788 8999854 47888888 77433 3 4689999999999988753 3455555 53 67877765 58
Q ss_pred HHHHHHHHHHHhc-c
Q 012678 404 RREIETAIRRVTV-E 417 (458)
Q Consensus 404 ~~~l~~~i~~ll~-~ 417 (458)
.+++.++|.++++ |
T Consensus 167 ~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 167 PGELANAILKALELS 181 (200)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcC
Confidence 9999999999998 8
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.74 E-value=0.00049 Score=64.24 Aligned_cols=106 Identities=9% Similarity=0.028 Sum_probs=74.6
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhC--CCEEEEEeCCCCCCCCCCCCCce-EEecCCCCCCCccCcccHHHHHHH
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSK--GFSITIIHTNFNSPNPSNYPHFS-FNSISESLWESEVSTENAISLLTV 88 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 88 (458)
-..+||+++-..+.|++.-+.++.+.|+++ +.+|++++.+...+..+..+.+. ++.++..- ....+.
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~~~~---------~~~~~~- 75 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNPNIDELIVVDKKG---------RHNSIS- 75 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCTTCSEEEEECCSS---------HHHHHH-
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCCccEEEEeCccc---------ccccHH-
Confidence 345799999999999999999999999998 99999999986666666556665 44554210 001111
Q ss_pred HHHhcChhHHHHHHHHhhCCCCCCCe-eEEEecCchhhHHHHHHHcCCCeEE
Q 012678 89 LNDKCVVPFQDCLAKLISNGDQEEPV-TCLITDAIWHFAQTVADTLRLPRIV 139 (458)
Q Consensus 89 ~~~~~~~~l~~~l~~l~~~~~~~~~p-DlvI~D~~~~~~~~~A~~lgiP~v~ 139 (458)
.+..++.++.+ .++ |++|.-....-...++...|+|..+
T Consensus 76 -------~~~~l~~~Lr~-----~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 76 -------GLNEVAREINA-----KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp -------HHHHHHHHHHH-----HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred -------HHHHHHHHHhh-----CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 12234555554 579 9999766555566788888999765
No 52
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.72 E-value=0.001 Score=62.06 Aligned_cols=103 Identities=10% Similarity=0.018 Sum_probs=65.9
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhC--CCEEEEEeCCCCCCCCCCCCCc-eEEecCCCCCCCccCcccHHHHHHHHHH
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSK--GFSITIIHTNFNSPNPSNYPHF-SFNSISESLWESEVSTENAISLLTVLND 91 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (458)
|||+++...+.|++.-..++.++|+++ +.+|++++.+...+.....+.+ +++.++.. .. ... +
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p~i~~v~~~~~~--~~---~~~----~----- 66 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG--HG---ALE----I----- 66 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC------------C----H-----
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCccCEEEEecCC--cc---ccc----h-----
Confidence 799999999889999999999999987 9999999987443333333444 34444311 00 000 0
Q ss_pred hcChhHHHHHHHHhhCCCCCCCeeEEEecCchhhHHHHHHHcCCCeEE
Q 012678 92 KCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIV 139 (458)
Q Consensus 92 ~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~ 139 (458)
..+..+...+.+ .+||++|.-....-...++...|+|..+
T Consensus 67 ---~~~~~l~~~l~~-----~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 67 ---GERRKLGHSLRE-----KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp ---HHHHHHHHHTTT-----TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ---HHHHHHHHHHHh-----cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 112234455544 6899999433345556678888999754
No 53
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.52 E-value=0.00098 Score=65.80 Aligned_cols=138 Identities=9% Similarity=0.040 Sum_probs=88.4
Q ss_pred CcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEE--cCCCCCCCcccCCCchhHH-HhhcCCcceeeccChhh---h
Q 012678 271 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVV--RPGLVPGVEWLEPLPKGFL-EMLDGRGHIVKWAPQQE---V 344 (458)
Q Consensus 271 ~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~ipq~~---l 344 (458)
..++|.+|++..-..+..+..+.+-+++.+..++|.. +...... ..+-..+. ..+.+++.+.+.+|+.+ .
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~----~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~ 515 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGIT----HPYVERFIKSYLGDSATAHPHSPYHQYLRI 515 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGG----HHHHHHHHHHHHGGGEEEECCCCHHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhh----HHHHHHHHHcCCCccEEEcCCCCHHHHHHH
Confidence 3688888888766788888888889988887777743 3211000 00111111 12335667788888765 4
Q ss_pred hcCCCcccccc---ccCchhHHHHHhhCCcccccccccchhhHH-HHHHHHHhccee-cCCcccHHHHHHHHHHHhcc
Q 012678 345 LAHPAVGGFWT---HNGWNSTLESICEGVPMICQPCFGDQLVNA-RYVSHVWRVGLH-LERKFERREIETAIRRVTVE 417 (458)
Q Consensus 345 l~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~~na-~~v~~~~G~G~~-l~~~~~~~~l~~~i~~ll~~ 417 (458)
+..+++ ++. .+|..|+.|||+.|||+|..+-..=.-..+ ..+.. .|+.-. +. -+.++..+...++.+|
T Consensus 516 y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA--~d~eeYv~~Av~La~D 588 (631)
T 3q3e_A 516 LHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA--NTVDEYVERAVRLAEN 588 (631)
T ss_dssp HHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE--SSHHHHHHHHHHHHHC
T ss_pred HhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec--CCHHHHHHHHHHHhCC
Confidence 477777 653 377899999999999999987432111222 22333 355432 22 3788888888899988
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.49 E-value=0.0003 Score=65.15 Aligned_cols=109 Identities=16% Similarity=0.259 Sum_probs=79.3
Q ss_pred CcceeeccChhhh---hcCCCccccccccCc---------hhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecC
Q 012678 332 RGHIVKWAPQQEV---LAHPAVGGFWTHNGW---------NSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLE 399 (458)
Q Consensus 332 ~~~~~~~ipq~~l---l~~~~~~~~I~HgG~---------~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~ 399 (458)
|+.+.+|+|+.++ |..++.+++.+-+.. +-+.|+|++|+|+|+.+ ...++..+++. |+|...+
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 5589999998774 555666656543433 35789999999999754 56788889995 9999887
Q ss_pred CcccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 012678 400 RKFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVD 453 (458)
Q Consensus 400 ~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~ 453 (458)
+.+++.++|..+.. ++.+.+++++++.+++++ .+--..+++.+.+.
T Consensus 290 ---~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~ 335 (339)
T 3rhz_A 290 ---DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILR----KGFFTRRLLTESVF 335 (339)
T ss_dssp ---SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHH----TTHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHH
Confidence 46788888888653 345789999999988887 44445555544443
No 55
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.24 E-value=0.0055 Score=56.45 Aligned_cols=131 Identities=12% Similarity=0.001 Sum_probs=74.9
Q ss_pred CCcEEEEEcCcccc---CCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccC---hhh
Q 012678 270 AKSVMYVSFGSIVV---VNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAP---QQE 343 (458)
Q Consensus 270 ~~~~i~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip---q~~ 343 (458)
+++.|.+..|+... .+.+.+.++++.|.+.++++++..++.. .....+.+.+.. +++.+.+-.+ -.+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~------e~~~~~~i~~~~-~~~~l~g~~sl~el~a 249 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH------EEERAKRLAEGF-AYVEVLPKMSLEGVAR 249 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH------HHHHHHHHHTTC-TTEEECCCCCHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH------HHHHHHHHHhhC-CcccccCCCCHHHHHH
Confidence 45688888887543 6777888888888766777665533221 001112221111 1222222222 255
Q ss_pred hhcCCCccccccccCchhHHHHHhhCCccccc--ccccchhhHHHHHHHHHhcc-eec-----CC-cccHHHHHHHHHHH
Q 012678 344 VLAHPAVGGFWTHNGWNSTLESICEGVPMICQ--PCFGDQLVNARYVSHVWRVG-LHL-----ER-KFERREIETAIRRV 414 (458)
Q Consensus 344 ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~--P~~~DQ~~na~~v~~~~G~G-~~l-----~~-~~~~~~l~~~i~~l 414 (458)
++.++++ +|+.= .|+++=|.+.|+|+|++ |.... .++- +|-. ..+ .. .++++++.+++.++
T Consensus 250 li~~a~l--~I~~D-SG~~HlAaa~g~P~v~lfg~t~p~--~~~P-----~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~ 319 (326)
T 2gt1_A 250 VLAGAKF--VVSVD-TGLSHLTAALDRPNITVYGPTDPG--LIGG-----YGKNQMVCRAPGNELSQLTANAVKQFIEEN 319 (326)
T ss_dssp HHHTCSE--EEEES-SHHHHHHHHTTCCEEEEESSSCHH--HHCC-----CSSSEEEEECGGGCGGGCCHHHHHHHHHHT
T ss_pred HHHhCCE--EEecC-CcHHHHHHHcCCCEEEEECCCChh--hcCC-----CCCCceEecCCcccccCCCHHHHHHHHHHH
Confidence 8999999 99873 23444477799999988 32111 1100 1111 111 12 68999999999999
Q ss_pred hcc
Q 012678 415 TVE 417 (458)
Q Consensus 415 l~~ 417 (458)
+++
T Consensus 320 l~~ 322 (326)
T 2gt1_A 320 AEK 322 (326)
T ss_dssp TTT
T ss_pred HHH
Confidence 976
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=95.97 E-value=0.029 Score=55.41 Aligned_cols=166 Identities=14% Similarity=0.121 Sum_probs=90.7
Q ss_pred CcEEEEEcCccccCCHHHHHHHHHHHHh---CCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChh---hh
Q 012678 271 KSVMYVSFGSIVVVNVTEFLEIAWGLAN---SRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQ---EV 344 (458)
Q Consensus 271 ~~~i~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~---~l 344 (458)
+..+++..|... +.+.+..+++|+.+ .+.++++...+.. + ....-.......+.++.+..+.+.. .+
T Consensus 326 ~~p~i~~vgRl~--~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~----~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 398 (536)
T 3vue_A 326 KIPLIAFIGRLE--EQKGPDVMAAAIPELMQEDVQIVLLGTGKK----K-FEKLLKSMEEKYPGKVRAVVKFNAPLAHLI 398 (536)
T ss_dssp TSCEEEEECCBS--GGGCHHHHHHHHHHHTTSSCEEEEECCBCH----H-HHHHHHHHHHHSTTTEEEECSCCHHHHHHH
T ss_pred CCcEEEEEeecc--ccCChHHHHHHHHHhHhhCCeEEEEeccCc----h-HHHHHHHHHhhcCCceEEEEeccHHHHHHH
Confidence 344556677766 34445566666554 3555555443321 0 0001112223445666777777754 36
Q ss_pred hcCCCcccccccc---Cc-hhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCC---------cccHHHHHHHH
Q 012678 345 LAHPAVGGFWTHN---GW-NSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLER---------KFERREIETAI 411 (458)
Q Consensus 345 l~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~---------~~~~~~l~~~i 411 (458)
+..+++ ||.-. |. .+++||+++|+|+|+... ......|.+. ..|..... ..++++|.++|
T Consensus 399 ~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai 471 (536)
T 3vue_A 399 MAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATL 471 (536)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHH
T ss_pred HHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHH
Confidence 788888 77532 33 589999999999998754 3445555552 44543221 25688999999
Q ss_pred HHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012678 412 RRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 412 ~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (458)
+++++..+.+.+++.. ++++...=|=++.+++-++..++
T Consensus 472 ~ral~~~~~~~~~~~~-------~~am~~~fSW~~~A~~y~~ly~~ 510 (536)
T 3vue_A 472 KRAIKVVGTPAYEEMV-------RNCMNQDLSWKGPAKNWENVLLG 510 (536)
T ss_dssp HHHHHHTTSHHHHHHH-------HHHHHSCCSSHHHHHHHHHHHHT
T ss_pred HHHHHhcCcHHHHHHH-------HHHHHhcCCHHHHHHHHHHHHHH
Confidence 9887521113333322 22222334445555555555544
No 57
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.78 E-value=0.0037 Score=59.71 Aligned_cols=83 Identities=12% Similarity=0.079 Sum_probs=56.8
Q ss_pred CcceeeccChhh---hhcCCCcccccccc---Cc-hhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCCcccH
Q 012678 332 RGHIVKWAPQQE---VLAHPAVGGFWTHN---GW-NSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFER 404 (458)
Q Consensus 332 ~~~~~~~ipq~~---ll~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 404 (458)
++.+.+++|+.+ ++..+++ ||.-. |. .++.||+++|+|+|+ -..+ ....+++. ..|..++. -++
T Consensus 296 ~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~-~d~ 366 (413)
T 2x0d_A 296 HLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ-LNP 366 (413)
T ss_dssp EEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS-CSH
T ss_pred cEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC-CCH
Confidence 457889998754 7888998 77432 33 578999999999998 3222 12344442 46776665 589
Q ss_pred HHHHHHHHHHhccchhHHHHHH
Q 012678 405 REIETAIRRVTVEAEGQEMRER 426 (458)
Q Consensus 405 ~~l~~~i~~ll~~~~~~~~~~~ 426 (458)
++++++|.++++| +..+++
T Consensus 367 ~~la~ai~~ll~~---~~~~~~ 385 (413)
T 2x0d_A 367 ENIAETLVELCMS---FNNRDV 385 (413)
T ss_dssp HHHHHHHHHHHHH---TC----
T ss_pred HHHHHHHHHHHcC---HHHHHH
Confidence 9999999999988 444444
No 58
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=95.38 E-value=0.067 Score=46.49 Aligned_cols=48 Identities=13% Similarity=-0.002 Sum_probs=32.8
Q ss_pred cccccCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCC
Q 012678 7 SNVQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPN 56 (458)
Q Consensus 7 ~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 56 (458)
+.+.+.++||||+..--+. |---+..|++.|.+ +|+|+++.|..+..-
T Consensus 4 ~~~~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg 51 (261)
T 3ty2_A 4 MKKTATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSG 51 (261)
T ss_dssp -------CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTT
T ss_pred hhhccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcC
Confidence 4456677899999888776 55567888999976 899999999755543
No 59
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=93.72 E-value=0.039 Score=54.51 Aligned_cols=43 Identities=12% Similarity=0.268 Sum_probs=30.2
Q ss_pred ccccCCCCEEEEEcCC--------CCcCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 012678 8 NVQQKKGRRVILFPLP--------LQGHINPMLQLASILYSKGFSITIIHTNF 52 (458)
Q Consensus 8 ~~~~~~~~~il~~~~~--------~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (458)
++....+|||+++++- |.|++ .-.|+++|+++||+|++++|.+
T Consensus 3 ~~~~~~~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~~G~~V~Vi~P~Y 53 (536)
T 3vue_A 3 HHHHHHHMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAANGHRVMVISPRY 53 (536)
T ss_dssp -----CCCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHTTTCEEEEEEECC
T ss_pred cccCCCCcEEEEEEEeccchhccCcHHHH--HHHHHHHHHHcCCeEEEEecCc
Confidence 4556789999999743 23333 5578999999999999999754
No 60
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=92.68 E-value=1.3 Score=38.22 Aligned_cols=110 Identities=10% Similarity=0.086 Sum_probs=63.0
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCC----CCCceEEecCCCCCCCccCcccHHHHHHHHH
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSN----YPHFSFNSISESLWESEVSTENAISLLTVLN 90 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (458)
||||+..--+. |---+..|++.|.+.| +|+++.+..+..-... ...+++..+..... +.-...+..
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~~~~--~~v~GTPaD------ 71 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFY--TVIDGTPAD------ 71 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEE--EETTCCHHH------
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccceecCCCeEEEEecCCCe--EEECCCHHH------
Confidence 88888887775 4556889999999888 9999999755543322 11233333222100 111111111
Q ss_pred HhcChhHHHHHHHHhhCCCCCCCeeEEEec----------Cc---hhhHHHHHHHcCCCeEEEecc
Q 012678 91 DKCVVPFQDCLAKLISNGDQEEPVTCLITD----------AI---WHFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 91 ~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D----------~~---~~~~~~~A~~lgiP~v~~~~~ 143 (458)
.+.-.+..++.. .+||+||+. .+ +.+|+.-|..+|||.|.++..
T Consensus 72 -----CV~lal~~l~~~----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (251)
T 2phj_A 72 -----CVHLGYRVILEE----KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp -----HHHHHHHTTTTT----CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -----HHHHHHHHhcCC----CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcC
Confidence 111122333321 469999964 22 245566778889999998764
No 61
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=92.14 E-value=2.4 Score=36.66 Aligned_cols=111 Identities=8% Similarity=0.096 Sum_probs=62.5
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCC----CCCceEEecCCCCC-CCccCcccHHHHHHHH
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSN----YPHFSFNSISESLW-ESEVSTENAISLLTVL 89 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 89 (458)
||||+..=-+. |---+..|+++|.+.| +|+++.|..+..-... ...+++..+..+-. ..+.-...+..
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaD----- 73 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPAD----- 73 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHH-----
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHH-----
Confidence 67777766665 4445888999998888 8999999755543321 12244444432100 00000111111
Q ss_pred HHhcChhHHHHHHHHhhCCCCCCCeeEEEecC----------c---hhhHHHHHHHcCCCeEEEecc
Q 012678 90 NDKCVVPFQDCLAKLISNGDQEEPVTCLITDA----------I---WHFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 90 ~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~----------~---~~~~~~~A~~lgiP~v~~~~~ 143 (458)
.+.-.+..++. .+||+||+.. + +.+++.-|..+|||.|.++..
T Consensus 74 ------CV~lal~~l~~-----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 129 (247)
T 1j9j_A 74 ------CVKLAYNVVMD-----KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISSA 129 (247)
T ss_dssp ------HHHHHHHTTST-----TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEES
T ss_pred ------HHHHHHHhhcc-----CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEecC
Confidence 11112333332 5799999632 1 355666777899999998763
No 62
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=91.88 E-value=2.9 Score=35.98 Aligned_cols=109 Identities=10% Similarity=0.023 Sum_probs=63.1
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCC----CCCceEEecCCCCC----CCccCcccHHHHH
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSN----YPHFSFNSISESLW----ESEVSTENAISLL 86 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 86 (458)
||||+.-=-+. |---+..|++.|.+.| +|+++.|..+..-... ...+++..++.+.+ ..+.-...+..=.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV 78 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV 78 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence 67777776665 4444888999999888 8999999755543321 12355555543210 0011111111111
Q ss_pred HHHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecC----------c---hhhHHHHHHHcCCCeEEEecc
Q 012678 87 TVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDA----------I---WHFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 87 ~~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~----------~---~~~~~~~A~~lgiP~v~~~~~ 143 (458)
.. .+. + . .+||+||+.. + +.+++.-|..+|||.|.++..
T Consensus 79 ~l-----------al~-l-~-----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 130 (244)
T 2e6c_A 79 AL-----------GLH-L-F-----GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSVP 130 (244)
T ss_dssp HH-----------HHH-H-S-----CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HH-----------HHc-C-C-----CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEecc
Confidence 11 112 2 2 5799999632 2 355666777899999998763
No 63
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=91.56 E-value=2 Score=37.94 Aligned_cols=110 Identities=8% Similarity=0.012 Sum_probs=62.2
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCC----CCCceEEecCCCCCCCccCcccHHHHHHHHH
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSN----YPHFSFNSISESLWESEVSTENAISLLTVLN 90 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (458)
||||+..=-|. +---+..|++.|.+.| +|+++.|..+..-... ...+++..++.+-...+.-...+..
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~~~~~~~v~GTPaD------ 72 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFRAIATSGTPSD------ 72 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSEEEEESSCHHH------
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCceEEECCcHHH------
Confidence 67877776665 4444888999999888 8999999755543321 1223343332210000110111111
Q ss_pred HhcChhHHHHHHHHhhCCCCCCCeeEEEec-----------C---chhhHHHHHHHcCCCeEEEecc
Q 012678 91 DKCVVPFQDCLAKLISNGDQEEPVTCLITD-----------A---IWHFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 91 ~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D-----------~---~~~~~~~~A~~lgiP~v~~~~~ 143 (458)
.+.-.+..+ . .+||+||+. . .+.+|+.-|..+|||.|.++..
T Consensus 73 -----CV~lal~~l-~-----~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 73 -----TVYLATFGL-G-----RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp -----HHHHHHHHH-T-----SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred -----HHHHHHhcC-C-----CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 111233334 2 579999963 1 1355566677899999998764
No 64
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=89.64 E-value=1.6 Score=42.12 Aligned_cols=105 Identities=12% Similarity=0.150 Sum_probs=64.9
Q ss_pred eeccChhh---hhcCCCcccccc---ccCch-hHHHHHhhCC-----cccccccccchhhHHHHHHHHHhcceecCCccc
Q 012678 336 VKWAPQQE---VLAHPAVGGFWT---HNGWN-STLESICEGV-----PMICQPCFGDQLVNARYVSHVWRVGLHLERKFE 403 (458)
Q Consensus 336 ~~~ipq~~---ll~~~~~~~~I~---HgG~~-s~~eal~~Gv-----P~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 403 (458)
.+++|+.+ ++..+++ ||. .=|+| ++.||+++|+ |+|+--+.+-- ..+ . -|+.++. .+
T Consensus 337 ~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~----~~l-~---~g~lv~p-~d 405 (482)
T 1uqt_A 337 NQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA----NEL-T---SALIVNP-YD 405 (482)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGG----GTC-T---TSEEECT-TC
T ss_pred CCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCH----HHh-C---CeEEECC-CC
Confidence 47788765 6778888 775 33664 8999999998 66655433311 111 1 2555554 57
Q ss_pred HHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012678 404 RREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 404 ~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (458)
.++++++|.++++++. +.-+++.++.++.++ . -+....++.+++.+++
T Consensus 406 ~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 406 RDEVAAALDRALTMSL-AERISRHAEMLDVIV----K-NDINHWQECFISDLKQ 453 (482)
T ss_dssp HHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHh
Confidence 8999999999998521 122333334444433 2 3567777777776653
No 65
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=89.53 E-value=0.19 Score=47.78 Aligned_cols=43 Identities=30% Similarity=0.413 Sum_probs=33.9
Q ss_pred cccCCCCEEEEEcCCCC-----cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 9 VQQKKGRRVILFPLPLQ-----GHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 9 ~~~~~~~~il~~~~~~~-----GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
....++|||++++.... |=......+|++|+++||+|++++..
T Consensus 41 ~~~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~ 88 (413)
T 2x0d_A 41 TSSIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTD 88 (413)
T ss_dssp ECCCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESS
T ss_pred cCCCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEec
Confidence 44467899999885532 33356899999999999999999985
No 66
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=89.32 E-value=2 Score=37.27 Aligned_cols=109 Identities=10% Similarity=0.076 Sum_probs=58.1
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCC----CCCceEEecCCCCCCCccCcccHHHHHHHHHH
Q 012678 16 RVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSN----YPHFSFNSISESLWESEVSTENAISLLTVLND 91 (458)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (458)
|||+.-=-+. +---+..|+++|.+.| +|+++.|..+..-... ...+++....... ...-...+..=
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~~~--~~~v~GTPaDC------ 72 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDF--YTVIDGTPADC------ 72 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTE--EEETTCCHHHH------
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcCCCCCceeEEeeccc--eeecCCChHHH------
Confidence 5666555553 3344778999999888 5999988755433321 1123333222100 00001111111
Q ss_pred hcChhHHHHHHHHhhCCCCCCCeeEEEec----------Cc---hhhHHHHHHHcCCCeEEEecc
Q 012678 92 KCVVPFQDCLAKLISNGDQEEPVTCLITD----------AI---WHFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 92 ~~~~~l~~~l~~l~~~~~~~~~pDlvI~D----------~~---~~~~~~~A~~lgiP~v~~~~~ 143 (458)
+.-.+..++.. .+||+||+. .+ +.+|+.-|..+|||.|.++..
T Consensus 73 -----V~lal~~~l~~----~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 73 -----VHLGYRVILEE----KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp -----HHHHHHTTTTT----CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -----HhhhhhhhcCC----CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 11122233322 579999983 22 356677788889999998754
No 67
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=88.70 E-value=5.1 Score=34.69 Aligned_cols=41 Identities=17% Similarity=0.168 Sum_probs=30.9
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPN 56 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 56 (458)
.||||+..=-+. |---+..|++.|.+.| +|+++.|..+..-
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg 41 (254)
T 2v4n_A 1 SMRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSG 41 (254)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcC
Confidence 378888877765 4455888999998776 9999999755543
No 68
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=87.02 E-value=2.5 Score=42.34 Aligned_cols=40 Identities=15% Similarity=0.043 Sum_probs=30.7
Q ss_pred eccChh---------hhhcCCCcccccccc---C-chhHHHHHhhCCcccccccc
Q 012678 337 KWAPQQ---------EVLAHPAVGGFWTHN---G-WNSTLESICEGVPMICQPCF 378 (458)
Q Consensus 337 ~~ipq~---------~ll~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~ 378 (458)
.|++.. +++..+++ ||.-. | ..+.+||+++|+|+|+.-..
T Consensus 499 ~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 499 EFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp SCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred cccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 787763 47888888 77543 3 36999999999999987554
No 69
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=86.16 E-value=5 Score=38.69 Aligned_cols=109 Identities=14% Similarity=0.096 Sum_probs=68.0
Q ss_pred CcceeeccChhh---hhcCCCcccccc---ccCch-hHHHHHhhC---CcccccccccchhhHHHHHHHHHhcceecCCc
Q 012678 332 RGHIVKWAPQQE---VLAHPAVGGFWT---HNGWN-STLESICEG---VPMICQPCFGDQLVNARYVSHVWRVGLHLERK 401 (458)
Q Consensus 332 ~~~~~~~ipq~~---ll~~~~~~~~I~---HgG~~-s~~eal~~G---vP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 401 (458)
++++...+|+.+ ++..+++ +|. .=|+| +..|++++| .|+|+--+.+ .+..+. .-|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEECC-
Confidence 456677888744 6777888 664 45887 568999996 5555443322 222221 23677776
Q ss_pred ccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012678 402 FERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHIL 456 (458)
Q Consensus 402 ~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 456 (458)
.+.++++++|.++|++.. +.-+++.+++.+.++ .-....-++.+++.+.
T Consensus 423 ~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 423 FDLVEQAEAISAALAAGP-RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLA 471 (496)
T ss_dssp TBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHh
Confidence 689999999999997521 334444555555543 3455666666666654
No 70
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=85.78 E-value=2.2 Score=35.36 Aligned_cols=99 Identities=12% Similarity=0.095 Sum_probs=61.7
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCC------CCCCCCCceEEecCCCCCCCccCcccHHHHH
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSP------NPSNYPHFSFNSISESLWESEVSTENAISLL 86 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (458)
++..|++++..+.|-..-.+.+|...+.+|+.|.|+....... ...+. ++++.....++... ..+..+..
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L-~v~~~~~g~gf~~~---~~~~~~~~ 102 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH-GVEFQVMATGFTWE---TQNREADT 102 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG-TCEEEECCTTCCCC---GGGHHHHH
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC-CcEEEEcccccccC---CCCcHHHH
Confidence 4678999999999999999999999999999999996542210 11222 47777776644321 11111111
Q ss_pred HHHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCchh
Q 012678 87 TVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWH 124 (458)
Q Consensus 87 ~~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~ 124 (458)
......+....+.+.. .++|+||.|.+..
T Consensus 103 ----~~a~~~l~~a~~~l~~-----~~yDlvILDEi~~ 131 (196)
T 1g5t_A 103 ----AACMAVWQHGKRMLAD-----PLLDMVVLDELTY 131 (196)
T ss_dssp ----HHHHHHHHHHHHHTTC-----TTCSEEEEETHHH
T ss_pred ----HHHHHHHHHHHHHHhc-----CCCCEEEEeCCCc
Confidence 1112333333333332 5799999998653
No 71
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=83.34 E-value=16 Score=29.19 Aligned_cols=140 Identities=15% Similarity=0.167 Sum_probs=80.4
Q ss_pred CcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCc
Q 012678 271 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAV 350 (458)
Q Consensus 271 ~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~ 350 (458)
+|.|-|-+||.. +....++....|+.++..+-..+..- ...|+.+.+ |+.+.. -...++
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--------HR~p~~l~~----------~~~~a~-~~g~~V 69 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA--------HRTPDYMFE----------YAETAR-ERGLKV 69 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHHH----------HHHHTT-TTTCCE
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec--------cCCHHHHHH----------HHHHHH-hCCCcE
Confidence 567888888866 55667788888999888765555432 235665521 111100 012345
Q ss_pred cccccccCchhHHHHHh---hCCcccccccccc--hhhHHHH-HHH--HHhcce---ecC--CcccHHHHHHHHHHHhcc
Q 012678 351 GGFWTHNGWNSTLESIC---EGVPMICQPCFGD--QLVNARY-VSH--VWRVGL---HLE--RKFERREIETAIRRVTVE 417 (458)
Q Consensus 351 ~~~I~HgG~~s~~eal~---~GvP~l~~P~~~D--Q~~na~~-v~~--~~G~G~---~l~--~~~~~~~l~~~i~~ll~~ 417 (458)
+|.=+|...-+-.+. .-+|+|.+|.... ....+.. +.. . |+.+ .++ ...+..-+...|- -+.|
T Consensus 70 --iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d 145 (170)
T 1xmp_A 70 --IIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GSFH 145 (170)
T ss_dssp --EEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HTTC
T ss_pred --EEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-ccCC
Confidence 887777543333333 3569999998652 2222211 222 2 4432 223 1255666666555 3456
Q ss_pred chhHHHHHHHHHHHHHHHHHH
Q 012678 418 AEGQEMRERIMHLKEKLELSL 438 (458)
Q Consensus 418 ~~~~~~~~~a~~~~~~~~~~~ 438 (458)
+.++++.+.++++.++..
T Consensus 146 ---~~l~~kl~~~r~~~~~~v 163 (170)
T 1xmp_A 146 ---DDIHDALELRREAIEKDV 163 (170)
T ss_dssp ---HHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHH
Confidence 789999999999888654
No 72
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=79.27 E-value=8.1 Score=31.89 Aligned_cols=37 Identities=24% Similarity=0.461 Sum_probs=30.5
Q ss_pred CEEEEEcC--CCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPL--PLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
||++.+.. ++-|-..-...||..|+++|++|.++-.+
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 56665553 56688999999999999999999999765
No 73
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=77.39 E-value=3.7 Score=34.42 Aligned_cols=38 Identities=16% Similarity=0.127 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+++||++-..|+.|-+. ...|.+.|.++|++|.++.++
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~ 40 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISK 40 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECc
Confidence 44689999889877666 899999999999999999986
No 74
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=76.89 E-value=3.4 Score=32.02 Aligned_cols=38 Identities=16% Similarity=0.175 Sum_probs=34.8
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
++.||++.+.++-+|-....-++..|..+|++|.....
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~ 39 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGV 39 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCC
Confidence 35689999999999999999999999999999998866
No 75
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=74.44 E-value=4.1 Score=33.79 Aligned_cols=36 Identities=11% Similarity=0.049 Sum_probs=31.7
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhC-CCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSK-GFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~ 51 (458)
|||++-..|+.|-.. ...|.+.|.++ |++|.++.++
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECc
Confidence 689999888876655 99999999999 9999999886
No 76
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=72.99 E-value=5.4 Score=30.71 Aligned_cols=38 Identities=13% Similarity=0.082 Sum_probs=28.9
Q ss_pred CCEEEEEcCCC---CcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPL---QGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~---~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+|++|+...+ .......+.+|...++.||+|+++-..
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 45665555544 467778889999999999999998775
No 77
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=70.79 E-value=40 Score=27.20 Aligned_cols=140 Identities=11% Similarity=0.100 Sum_probs=80.7
Q ss_pred CcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCc
Q 012678 271 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAV 350 (458)
Q Consensus 271 ~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~ 350 (458)
++.|-|-+||.. +....++....|+.++..+-..+..- ...|+.+.+ |+.+.. -...++
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--------HR~p~~l~~----------~~~~a~-~~g~~V 79 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSA--------HRTPDRLAD----------YARTAA-ERGLNV 79 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTCHHHHHH----------HHHHTT-TTTCCE
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcc--------cCCHHHHHH----------HHHHHH-hCCCcE
Confidence 455777788866 55667778888999888765555432 336665521 111100 012344
Q ss_pred cccccccCc----hhHHHHHhhCCcccccccccc--hhhHHHH-HHH--HHhcc---eecC--CcccHHHHHHHHHHHhc
Q 012678 351 GGFWTHNGW----NSTLESICEGVPMICQPCFGD--QLVNARY-VSH--VWRVG---LHLE--RKFERREIETAIRRVTV 416 (458)
Q Consensus 351 ~~~I~HgG~----~s~~eal~~GvP~l~~P~~~D--Q~~na~~-v~~--~~G~G---~~l~--~~~~~~~l~~~i~~ll~ 416 (458)
+|.-+|. .++..++ .-+|+|.+|.... ....+.. +.. . |+. +.++ ...+..-+...|- -+.
T Consensus 80 --iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~ 154 (182)
T 1u11_A 80 --IIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALY 154 (182)
T ss_dssp --EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGG
T ss_pred --EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccC
Confidence 8877664 3444444 4689999998642 2222211 222 2 444 2233 1255666665555 345
Q ss_pred cchhHHHHHHHHHHHHHHHHHHh
Q 012678 417 EAEGQEMRERIMHLKEKLELSLL 439 (458)
Q Consensus 417 ~~~~~~~~~~a~~~~~~~~~~~~ 439 (458)
| +.++++.+.++++.++...
T Consensus 155 d---~~l~~kL~~~r~~~~~~v~ 174 (182)
T 1u11_A 155 N---PALAARLETWRALQTASVP 174 (182)
T ss_dssp C---HHHHHHHHHHHHHHHHHSC
T ss_pred C---HHHHHHHHHHHHHHHHHHH
Confidence 6 7899999999998886543
No 78
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=70.62 E-value=30 Score=28.00 Aligned_cols=77 Identities=9% Similarity=0.083 Sum_probs=42.9
Q ss_pred eeeccCh-hhhh-cCCCccccccccCchhHHHH---HhhCCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHH
Q 012678 335 IVKWAPQ-QEVL-AHPAVGGFWTHNGWNSTLES---ICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIET 409 (458)
Q Consensus 335 ~~~~ipq-~~ll-~~~~~~~~I~HgG~~s~~ea---l~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ 409 (458)
++++.+. ..++ ..+++ .++--||.||+-|+ +.+++|++++|.+. .....+... -..... ..-+++++.+
T Consensus 93 ~~~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~-~~~~~~e~~~ 166 (176)
T 2iz6_A 93 VTGLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVH-VAADVAGAIA 166 (176)
T ss_dssp ECCCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEE-EESSHHHHHH
T ss_pred EcCCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEE-EcCCHHHHHH
Confidence 3455553 3333 34443 45567889986655 67999999999832 111122221 111111 1347888888
Q ss_pred HHHHHhcc
Q 012678 410 AIRRVTVE 417 (458)
Q Consensus 410 ~i~~ll~~ 417 (458)
.+.+.+.+
T Consensus 167 ~l~~~~~~ 174 (176)
T 2iz6_A 167 AVKQLLAK 174 (176)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 87776643
No 79
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=70.04 E-value=7.1 Score=32.49 Aligned_cols=41 Identities=17% Similarity=0.007 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCCCcCHH-HHHHHHHHHHhCCCEEEEEeCCCCC
Q 012678 13 KGRRVILFPLPLQGHIN-PMLQLASILYSKGFSITIIHTNFNS 54 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~-p~l~La~~L~~rGh~Vt~~~~~~~~ 54 (458)
+..||++-..|+ +... -.+.+.+.|.++|++|.++.++...
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~ 47 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQ 47 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSC
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHH
Confidence 456899888888 5555 7899999999999999999987443
No 80
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=69.76 E-value=4.2 Score=32.57 Aligned_cols=40 Identities=20% Similarity=0.321 Sum_probs=36.1
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.++.||++.+.++-.|-....-++..|..+|++|......
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 4578999999999999999999999999999999988653
No 81
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=69.42 E-value=5.5 Score=33.42 Aligned_cols=40 Identities=18% Similarity=0.110 Sum_probs=36.2
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
..+.+|++.+.++..|-....-++..|..+|++|.++...
T Consensus 86 ~~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 86 PSVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CCCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CCCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 3467999999999999999999999999999999998763
No 82
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=69.17 E-value=7.4 Score=33.91 Aligned_cols=40 Identities=13% Similarity=0.109 Sum_probs=36.8
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
..+.+|++.+.++..|-....-++..|..+|++|.++...
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 4577999999999999999999999999999999998764
No 83
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=68.41 E-value=6 Score=32.12 Aligned_cols=39 Identities=15% Similarity=0.056 Sum_probs=32.5
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNS 54 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 54 (458)
+||++...|+.|=. -...+.+.|.++|++|.++.++...
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~~g~~V~vv~T~~A~ 44 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKSKFDEVNVIASTNGR 44 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTTTCSEEEEEECTGGG
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHHCCCEEEEEECcCHH
Confidence 58998888886655 4899999999999999999987443
No 84
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=68.37 E-value=18 Score=30.79 Aligned_cols=106 Identities=7% Similarity=-0.028 Sum_probs=57.6
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhC--CCEEEEEeCCCCCCC---CCCCCCceEEecCCCCCCCccCcccHHHHH
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSK--GFSITIIHTNFNSPN---PSNYPHFSFNSISESLWESEVSTENAISLL 86 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (458)
.+.|||+|+.++. |+ -+..+.+.|.+. +++|..+.+...... .+...|+.+..++..- ....
T Consensus 20 ~~~~rI~~l~SG~-g~--~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~---~~~r------- 86 (229)
T 3auf_A 20 GHMIRIGVLISGS-GT--NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAA---YPSR------- 86 (229)
T ss_dssp TTCEEEEEEESSC-CH--HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGG---SSSH-------
T ss_pred CCCcEEEEEEeCC-cH--HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECccc---ccch-------
Confidence 3446999998887 43 367777888776 688877665421111 0111456655443210 0000
Q ss_pred HHHHHhcChhHH-HHHHHHhhCCCCCCCeeEEEecCch-hhHHHHHHHcCCCeEEEecc
Q 012678 87 TVLNDKCVVPFQ-DCLAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 87 ~~~~~~~~~~l~-~~l~~l~~~~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 143 (458)
..+. +.++.+.+ .+||+||+-.+. .-...+-......++-+.++
T Consensus 87 --------~~~~~~~~~~l~~-----~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 87 --------TAFDAALAERLQA-----YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp --------HHHHHHHHHHHHH-----TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred --------hhccHHHHHHHHh-----cCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 1111 13333333 679999988764 33344445555667777666
No 85
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=68.29 E-value=44 Score=26.74 Aligned_cols=139 Identities=15% Similarity=0.145 Sum_probs=78.2
Q ss_pred CCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCC
Q 012678 270 AKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPA 349 (458)
Q Consensus 270 ~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~ 349 (458)
.++.|-|-+||.. +....++....|+.++..+-..+..- ...|+.+.+ |+-... -...+
T Consensus 6 ~~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa--------HR~p~~~~~----------~~~~a~-~~g~~ 64 (174)
T 3lp6_A 6 ERPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA--------HRTPEAMFS----------YARGAA-ARGLE 64 (174)
T ss_dssp CCCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTCHHHHHH----------HHHHHH-HHTCC
T ss_pred CCCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC--------CCCHHHHHH----------HHHHHH-hCCCC
Confidence 3456777788866 45567788888999888765555432 336665532 111110 12345
Q ss_pred ccccccccCch----hHHHHHhhCCcccccccccchh-hHHHH--HHHHH--hc--cee-cCCcccHHHHHHHHHHHhcc
Q 012678 350 VGGFWTHNGWN----STLESICEGVPMICQPCFGDQL-VNARY--VSHVW--RV--GLH-LERKFERREIETAIRRVTVE 417 (458)
Q Consensus 350 ~~~~I~HgG~~----s~~eal~~GvP~l~~P~~~DQ~-~na~~--v~~~~--G~--G~~-l~~~~~~~~l~~~i~~ll~~ 417 (458)
+ +|.-+|.. ++..++ .-+|+|.+|...... ..... +.. + |+ +.. ++...+...++..|-.+ .|
T Consensus 65 V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vq-mp~GvpVatV~I~~~~nAa~lAa~Il~~-~d 139 (174)
T 3lp6_A 65 V--IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQ-MPAGVPVATVSIGGAGNAGLLAVRMLGA-AN 139 (174)
T ss_dssp E--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHC-CCTTCCCEECCTTCHHHHHHHHHHHHHT-TC
T ss_pred E--EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCeeEEEEcCcchHHHHHHHHHHhC-CC
Confidence 5 88777743 444443 558999999863211 12222 222 2 32 211 22235566666555544 44
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q 012678 418 AEGQEMRERIMHLKEKLELS 437 (458)
Q Consensus 418 ~~~~~~~~~a~~~~~~~~~~ 437 (458)
+.++++.+.++++.++.
T Consensus 140 ---~~l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 140 ---PQLRARIVAFQDRLADV 156 (174)
T ss_dssp ---HHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHH
Confidence 68888888888888754
No 86
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=65.24 E-value=8.4 Score=25.98 Aligned_cols=50 Identities=12% Similarity=0.153 Sum_probs=34.8
Q ss_pred hhCCcccccccccchhhHHHHHHHHHhcceecCC--cccHHHHHHHHHHHhc
Q 012678 367 CEGVPMICQPCFGDQLVNARYVSHVWRVGLHLER--KFERREIETAIRRVTV 416 (458)
Q Consensus 367 ~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~--~~~~~~l~~~i~~ll~ 416 (458)
-+|+|++++--.+.|.+.-..-.++..-|+..+- ..++++|.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhhccCCHHHHHHHHHHHHH
Confidence 3788998888888887765443322245555554 6789999999988874
No 87
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=65.04 E-value=54 Score=26.50 Aligned_cols=139 Identities=14% Similarity=0.168 Sum_probs=78.6
Q ss_pred CcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCc
Q 012678 271 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAV 350 (458)
Q Consensus 271 ~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~ 350 (458)
-|.|-|-+||.. +....++....|+.++.++-..+..- ...|+.+.+ |+.+.. =..+++
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--------HR~p~~l~~----------~~~~a~-~~g~~V 71 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA--------HRTPDRMFE----------YAKNAE-ERGIEV 71 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT--------TTCHHHHHH----------HHHHTT-TTTCCE
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc--------cCCHHHHHH----------HHHHHH-hCCCcE
Confidence 467888888866 55667778888898888765555432 336665532 111100 012344
Q ss_pred cccccccCc----hhHHHHHhhCCcccccccccc--hhhHHHH-HHHHH--hcce--e-cCCcccHHHHHHHHHHHhccc
Q 012678 351 GGFWTHNGW----NSTLESICEGVPMICQPCFGD--QLVNARY-VSHVW--RVGL--H-LERKFERREIETAIRRVTVEA 418 (458)
Q Consensus 351 ~~~I~HgG~----~s~~eal~~GvP~l~~P~~~D--Q~~na~~-v~~~~--G~G~--~-l~~~~~~~~l~~~i~~ll~~~ 418 (458)
+|.=+|. .++..++ .-+|+|.+|.... ....+.. +.. + |+.+ . ++...+..-++..|- -++|
T Consensus 72 --iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~Id~~~nAa~lAaqIl-a~~d- 145 (183)
T 1o4v_A 72 --IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAINNAKNAGILAASIL-GIKY- 145 (183)
T ss_dssp --EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCTTCHHHHHHHHHHHH-HTTC-
T ss_pred --EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEecCCchHHHHHHHHHH-hcCC-
Confidence 7777664 3444444 5679999998652 2222211 222 3 4221 1 222456666666665 3455
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 012678 419 EGQEMRERIMHLKEKLELSL 438 (458)
Q Consensus 419 ~~~~~~~~a~~~~~~~~~~~ 438 (458)
+.++++.+.++.+.++..
T Consensus 146 --~~l~~kL~~~r~~~~~~v 163 (183)
T 1o4v_A 146 --PEIARKVKEYKERMKREV 163 (183)
T ss_dssp --HHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHH
Confidence 678888888887777543
No 88
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=63.61 E-value=6.3 Score=34.95 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=23.6
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
|||++. |+.|-+- ..|+++|.++||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 786543 3336554 4578999999999999875
No 89
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=62.44 E-value=9.2 Score=32.04 Aligned_cols=41 Identities=15% Similarity=0.090 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSP 55 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 55 (458)
++.||++...|+.+-.. ...|.+.|.++| +|.++.++....
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~ 58 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLH 58 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGG
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHH
Confidence 35689999999987666 899999999999 999999874433
No 90
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=62.24 E-value=9.6 Score=32.11 Aligned_cols=41 Identities=17% Similarity=0.129 Sum_probs=35.7
Q ss_pred cCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
...+.||++.+.++..|-....-++..|..+|++|+.+...
T Consensus 89 ~~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 89 GEEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp ---CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 34568999999999999999999999999999999998764
No 91
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=61.73 E-value=13 Score=28.87 Aligned_cols=40 Identities=18% Similarity=0.238 Sum_probs=29.4
Q ss_pred CCCCEEEEEcC-C-CCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 12 KKGRRVILFPL-P-LQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~-~-~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+..||++++-. | ..-.+--.+=++..|.++||+|++.+++
T Consensus 4 ~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~np 45 (157)
T 1kjn_A 4 ESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANP 45 (157)
T ss_dssp --CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred ccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCH
Confidence 34678665532 2 3466667888999999999999999987
No 92
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=61.53 E-value=17 Score=30.29 Aligned_cols=45 Identities=11% Similarity=-0.039 Sum_probs=32.3
Q ss_pred chhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEE
Q 012678 262 ISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWV 306 (458)
Q Consensus 262 ~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 306 (458)
.+|+....++.++||..++......+.+..+.+++++.|..+.+.
T Consensus 19 ~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 19 TEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 445544445789999888765445567888999999999875543
No 93
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=61.47 E-value=69 Score=29.89 Aligned_cols=95 Identities=15% Similarity=0.223 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCc-eEEecCCCCCCCccCcccHHHHHHHHHH
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHF-SFNSISESLWESEVSTENAISLLTVLND 91 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (458)
++-||+++..+.... .+.++.++.|++|+++.+.... ........ .++.++.. .+....+
T Consensus 4 ~~k~l~Il~~~~~~~-----~i~~aa~~lG~~vv~v~~~~~~-~~~~~~~~d~~~~~~~~--------~d~~~~~----- 64 (425)
T 3vot_A 4 RNKNLAIICQNKHLP-----FIFEEAERLGLKVTFFYNSAED-FPGNLPAVERCVPLPLF--------EDEEAAM----- 64 (425)
T ss_dssp CCCEEEEECCCTTCC-----HHHHHHHHTTCEEEEEEETTSC-CCCSCTTEEEEEEECTT--------TCHHHHH-----
T ss_pred CCcEEEEECCChhHH-----HHHHHHHHCCCEEEEEECCCcc-cccCHhhccEEEecCCC--------CCHHHHH-----
Confidence 345677776544321 3567777889999998764221 11111111 23333311 1111111
Q ss_pred hcChhHHHHHHHHhhCCCCCCCeeEEEe--cCchhhHHHHHHHcCCCe
Q 012678 92 KCVVPFQDCLAKLISNGDQEEPVTCLIT--DAIWHFAQTVADTLRLPR 137 (458)
Q Consensus 92 ~~~~~l~~~l~~l~~~~~~~~~pDlvI~--D~~~~~~~~~A~~lgiP~ 137 (458)
+.+.++... .++|.|+. |.....+..+++.+|+|.
T Consensus 65 -------~~~~~~~~~----~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 65 -------DVVRQTFVE----FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp -------HHHHHHHHH----SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred -------HHHHHhhhh----cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 222333322 57899985 333455667889999994
No 94
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=60.64 E-value=20 Score=29.64 Aligned_cols=43 Identities=9% Similarity=0.070 Sum_probs=34.2
Q ss_pred hhHHHHHHHHhhCCCCCCCeeEEEecCchhhHHHHHHHcCCCeEEEecchH
Q 012678 95 VPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSI 145 (458)
Q Consensus 95 ~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~ 145 (458)
....+.+.++.+ .+.|+||.|.. +...|+++|+|.+.+.++..
T Consensus 129 ~e~~~~i~~l~~-----~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 129 DEITTLISKVKT-----ENIKIVVSGKT---VTDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp GGHHHHHHHHHH-----TTCCEEEECHH---HHHHHHHTTCEEEECCCCHH
T ss_pred HHHHHHHHHHHH-----CCCeEEECCHH---HHHHHHHcCCcEEEEecCHH
Confidence 455668888887 67999999853 46889999999999888643
No 95
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=60.53 E-value=9.2 Score=33.16 Aligned_cols=43 Identities=21% Similarity=0.088 Sum_probs=34.0
Q ss_pred cccCCCCEEEEEcCC---CCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 9 VQQKKGRRVILFPLP---LQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 9 ~~~~~~~~il~~~~~---~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
...+..||.+|++.+ +.|-=.-.-.|+..|..||+.|+.+--+
T Consensus 17 ~~~~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~D 62 (295)
T 2vo1_A 17 NLYFQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKID 62 (295)
T ss_dssp ----CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ccccccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecc
Confidence 344678999999987 4577788999999999999999998654
No 96
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=59.78 E-value=11 Score=32.04 Aligned_cols=26 Identities=27% Similarity=0.420 Sum_probs=21.1
Q ss_pred CcCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 012678 25 QGHINPMLQLASILYSKGFSITIIHTNF 52 (458)
Q Consensus 25 ~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (458)
.|. .-..+|++|+++|++|++++.+.
T Consensus 28 SG~--mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGH--LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCH--HHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCH--HHHHHHHHHHHCCCEEEEEeCCc
Confidence 454 35678999999999999998863
No 97
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=59.65 E-value=12 Score=31.70 Aligned_cols=39 Identities=23% Similarity=0.185 Sum_probs=35.4
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+++|++.--|+.|-..-++.+|..|+++|+.|.++..+
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D 43 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVE 43 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 367899999999999999999999999999999888775
No 98
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=59.12 E-value=19 Score=33.08 Aligned_cols=38 Identities=18% Similarity=0.151 Sum_probs=25.3
Q ss_pred CcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCC
Q 012678 271 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPG 310 (458)
Q Consensus 271 ~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 310 (458)
+.+++.+.||.....+ ...++++|++.|+++.|....+
T Consensus 3 ~~i~i~~GGTgGHi~p--alala~~L~~~g~~V~~vg~~~ 40 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFP--ALACAREFQARGYAVHWLGTPR 40 (365)
T ss_dssp CEEEEECCSSHHHHHH--HHHHHHHHHHTTCEEEEEECSS
T ss_pred CcEEEEcCCCHHHHHH--HHHHHHHHHhCCCEEEEEECCc
Confidence 4566666677553111 3457788998899999987543
No 99
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=59.11 E-value=9 Score=32.01 Aligned_cols=39 Identities=10% Similarity=0.018 Sum_probs=30.9
Q ss_pred CCEEEEEcCCCCcCHHH-HHHHHHHHHhCCCEEEEEeCCCC
Q 012678 14 GRRVILFPLPLQGHINP-MLQLASILYSKGFSITIIHTNFN 53 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~~~~ 53 (458)
..||++...|+ +...- ...+.+.|.++|++|.++.++..
T Consensus 5 ~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A 44 (207)
T 3mcu_A 5 GKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTV 44 (207)
T ss_dssp TCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC--
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHH
Confidence 45888888887 44554 78999999999999999999733
No 100
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=58.97 E-value=20 Score=30.13 Aligned_cols=103 Identities=10% Similarity=0.058 Sum_probs=54.4
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCC--EEEEEeCCCCCCCC---CCCCCceEEecCCCCCCCccCcccHHHHHHHH
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGF--SITIIHTNFNSPNP---SNYPHFSFNSISESLWESEVSTENAISLLTVL 89 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (458)
|||+|+.++.. + -+..+.+.|.+.+| +|..+.+....... +...|+.+..++.. ....
T Consensus 2 ~rI~vl~SG~g-~--~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~---~~~~----------- 64 (216)
T 2ywr_A 2 LKIGVLVSGRG-S--NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRK---EFPS----------- 64 (216)
T ss_dssp EEEEEEECSCC-H--HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGG---GSSS-----------
T ss_pred CEEEEEEeCCc-H--HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcc---cccc-----------
Confidence 58998887773 3 36777788888888 77666553211110 11134544433321 0000
Q ss_pred HHhcChhHH-HHHHHHhhCCCCCCCeeEEEecCch-hhHHHHHHHcCCCeEEEecc
Q 012678 90 NDKCVVPFQ-DCLAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 90 ~~~~~~~l~-~~l~~l~~~~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 143 (458)
...+. +.++.+.+ .+||+||+-.+. .-...+-......++-++++
T Consensus 65 ----r~~~~~~~~~~l~~-----~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 65 ----KKEFEERMALELKK-----KGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp ----HHHHHHHHHHHHHH-----TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred ----hhhhhHHHHHHHHh-----cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 01111 13333333 679999988764 33344445555567777666
No 101
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=58.97 E-value=13 Score=28.17 Aligned_cols=32 Identities=31% Similarity=0.526 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|||+++ |+ |.+- ..+|+.|.++||+|+++..
T Consensus 4 ~m~i~Ii--G~-G~iG--~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIA--GI-GRVG--YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEE--CC-SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEE--CC-CHHH--HHHHHHHHhCCCeEEEEEC
Confidence 4788888 33 6554 4678999999999998865
No 102
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=58.88 E-value=25 Score=29.49 Aligned_cols=101 Identities=14% Similarity=0.051 Sum_probs=55.2
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhC--CCEEEEEeCCCCCCC---CCCCCCceEEecCCC-CCCCccCcccHHHH
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSK--GFSITIIHTNFNSPN---PSNYPHFSFNSISES-LWESEVSTENAISL 85 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 85 (458)
.+++||+++.++. ||. +.+|.+.+.+. +++|..+.+...... .+...|+.+..++.. +. +
T Consensus 6 ~~~~ri~vl~SG~-gsn--l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~~~~~-------~---- 71 (215)
T 3kcq_A 6 KKELRVGVLISGR-GSN--LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRKPLD-------I---- 71 (215)
T ss_dssp -CCEEEEEEESSC-CHH--HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCBTTBC-------H----
T ss_pred CCCCEEEEEEECC-cHH--HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCcccCC-------h----
Confidence 4567898888877 444 44555666543 378888776421111 011245665554421 10 0
Q ss_pred HHHHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCch-hhHHHHHHHcCCCeEEEecc
Q 012678 86 LTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 86 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 143 (458)
.+.++.+.+ .+||+||.-.+. .-...+-....-.++-++++
T Consensus 72 ------------~~~~~~L~~-----~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 72 ------------EHISTVLRE-----HDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp ------------HHHHHHHHH-----TTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ------------HHHHHHHHH-----hCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 223344443 679999988764 33344445555667777666
No 103
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=58.56 E-value=6.8 Score=33.57 Aligned_cols=37 Identities=14% Similarity=0.010 Sum_probs=33.1
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
|||+|..-|+-|=..-...||..|+++|++|.++-.+
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 37 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGD 37 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 7899977778899999999999999999999998665
No 104
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=57.59 E-value=15 Score=27.92 Aligned_cols=37 Identities=16% Similarity=0.113 Sum_probs=26.4
Q ss_pred CEEEEEcCC-CCc--CHHHHHHHHHHHHhCCCEE-EEEeCC
Q 012678 15 RRVILFPLP-LQG--HINPMLQLASILYSKGFSI-TIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~-~~G--H~~p~l~La~~L~~rGh~V-t~~~~~ 51 (458)
||++++... .+| .....+.+|..+.+.||+| .++-..
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 454444433 343 4567899999999999999 887664
No 105
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=56.94 E-value=20 Score=29.45 Aligned_cols=36 Identities=19% Similarity=0.306 Sum_probs=31.2
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.||++...|+.|-. =...+.++|.++|++|.++.++
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~ 37 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISR 37 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEECh
Confidence 38999999987754 6799999999999999999886
No 106
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=56.86 E-value=8.5 Score=30.15 Aligned_cols=34 Identities=15% Similarity=0.248 Sum_probs=26.0
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+.||+++- .|++- ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 456788773 35554 68899999999999999773
No 107
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=56.05 E-value=72 Score=25.06 Aligned_cols=132 Identities=16% Similarity=0.182 Sum_probs=72.8
Q ss_pred EEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhc--CCCcc
Q 012678 274 MYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLA--HPAVG 351 (458)
Q Consensus 274 i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~--~~~~~ 351 (458)
|-|-+||.. +....++....++.++.++-..+.. ....|+.+.+ +.. ..++
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~s--------aHR~p~~~~~----------------~~~~a~~~V- 54 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVAS--------AHRTPELVEE----------------IVKNSKADV- 54 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTCHHHHHH----------------HHHHCCCSE-
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEc--------ccCCHHHHHH----------------HHHhcCCCE-
Confidence 445566655 4556777888888888875555543 2336665532 111 1144
Q ss_pred ccccccCchhHHHHHh---hCCcccccccccchhhHHHHHHHH-H--hcce---ecCCcccHHHHHHHHHHHhccchhHH
Q 012678 352 GFWTHNGWNSTLESIC---EGVPMICQPCFGDQLVNARYVSHV-W--RVGL---HLERKFERREIETAIRRVTVEAEGQE 422 (458)
Q Consensus 352 ~~I~HgG~~s~~eal~---~GvP~l~~P~~~DQ~~na~~v~~~-~--G~G~---~l~~~~~~~~l~~~i~~ll~~~~~~~ 422 (458)
+|.-+|...-+-++. .-+|+|.+|....-......+.=- + |+.+ .++...+..-+...|- -++| +.
T Consensus 55 -iIa~AG~aa~Lpgvva~~t~~PVIgVP~~~~l~G~daLlS~vqmP~gvpVatV~I~~~~nAa~lA~~Il-~~~d---~~ 129 (157)
T 2ywx_A 55 -FIAIAGLAAHLPGVVASLTTKPVIAVPVDAKLDGLDALLSSVQMPPGIPVATVGIDRGENAAILALEIL-ALKD---EN 129 (157)
T ss_dssp -EEEEEESSCCHHHHHHTTCSSCEEEEEECSSGGGHHHHHHHHSCCTTSCCEECCTTCHHHHHHHHHHHH-TTTC---HH
T ss_pred -EEEEcCchhhhHHHHHhccCCCEEEecCCCccCcHHHHHHHhcCCCCCeeEEEecCCcHHHHHHHHHHH-hcCC---HH
Confidence 777766533333333 356999999833222222222210 1 4321 1122456666665554 3455 78
Q ss_pred HHHHHHHHHHHHHHH
Q 012678 423 MRERIMHLKEKLELS 437 (458)
Q Consensus 423 ~~~~a~~~~~~~~~~ 437 (458)
++++.+.++++.++.
T Consensus 130 l~~kl~~~r~~~~~~ 144 (157)
T 2ywx_A 130 IAKKLIEYREKMKKK 144 (157)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 899998888888753
No 108
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=55.70 E-value=6.4 Score=34.65 Aligned_cols=52 Identities=12% Similarity=0.189 Sum_probs=35.7
Q ss_pred CCccccccccCchhHHHHHhh------CCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhcc
Q 012678 348 PAVGGFWTHNGWNSTLESICE------GVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 417 (458)
Q Consensus 348 ~~~~~~I~HgG~~s~~eal~~------GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 417 (458)
+++ +|+=||=||+.++... ++|++.+|.. . +| -+. ++.++++.+++++++++
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~-lg---fl~-~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------H-LG---FYA-DWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------S-CC---SSC-CBCGGGHHHHHHHHHTT
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------C-CC---cCC-cCCHHHHHHHHHHHHcC
Confidence 455 9999999999998765 8899998751 0 12 111 34566677777777654
No 109
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=55.58 E-value=16 Score=26.87 Aligned_cols=38 Identities=13% Similarity=-0.008 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|||+++|..|.|+-.-.-.+-+.+.++|.++.+-+.
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~ 40 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAI 40 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 45899999999998887777788888888988766444
No 110
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=54.50 E-value=14 Score=27.67 Aligned_cols=38 Identities=16% Similarity=0.068 Sum_probs=29.4
Q ss_pred CCEEEEEcCCCCcCH--HHHHHHHHHHHhCC--CEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHI--NPMLQLASILYSKG--FSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~--~p~l~La~~L~~rG--h~Vt~~~~~ 51 (458)
+||++|+-+.+.-.. +..+..|....++| |+|.++...
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 388888877754333 45788999999999 899999875
No 111
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=53.86 E-value=12 Score=31.35 Aligned_cols=44 Identities=14% Similarity=0.137 Sum_probs=32.8
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHh-CCCEEEEEeCCCCCCC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYS-KGFSITIIHTNFNSPN 56 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~ 56 (458)
.++.||++...|+.+=+ -...|.++|.+ +|++|.++.++.....
T Consensus 17 l~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~f 61 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHF 61 (206)
T ss_dssp CSSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGS
T ss_pred cCCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHH
Confidence 44568999988886644 46999999999 8999999999744333
No 112
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=53.15 E-value=88 Score=25.18 Aligned_cols=140 Identities=15% Similarity=0.159 Sum_probs=77.8
Q ss_pred CCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCC
Q 012678 270 AKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPA 349 (458)
Q Consensus 270 ~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~ 349 (458)
-+|.|-|-+||.. +....+...+.|++++..+-..+... ...|+.+.+ |+-... -....
T Consensus 21 mkp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA--------HRtp~~l~~----------~~~~a~-~~g~~ 79 (181)
T 4b4k_A 21 MKSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA--------HRTPDYMFE----------YAETAR-ERGLK 79 (181)
T ss_dssp -CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHHH----------HHHHTT-TTTCC
T ss_pred CCccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc--------ccChHHHHH----------HHHHHH-hcCce
Confidence 3577888899977 45567888899999988765555432 225555421 111110 11223
Q ss_pred ccccccccCch----hHHHHHhhCCcccccccccch---hhHHHHHHHHHhcceecCC-ccc------HHHHHHHHHHHh
Q 012678 350 VGGFWTHNGWN----STLESICEGVPMICQPCFGDQ---LVNARYVSHVWRVGLHLER-KFE------RREIETAIRRVT 415 (458)
Q Consensus 350 ~~~~I~HgG~~----s~~eal~~GvP~l~~P~~~DQ---~~na~~v~~~~G~G~~l~~-~~~------~~~l~~~i~~ll 415 (458)
+ +|.-.|.- ++..+ ..-+|+|.+|....- .+.-.-+.. +--|+-+-. ... ..-++..|-. +
T Consensus 80 V--iIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qILa-~ 154 (181)
T 4b4k_A 80 V--IIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQILG-S 154 (181)
T ss_dssp E--EEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHHHT-T
T ss_pred E--EEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHHHc-c
Confidence 4 77766643 33333 345799999986532 222233333 334543332 222 2333333322 3
Q ss_pred ccchhHHHHHHHHHHHHHHHHHH
Q 012678 416 VEAEGQEMRERIMHLKEKLELSL 438 (458)
Q Consensus 416 ~~~~~~~~~~~a~~~~~~~~~~~ 438 (458)
.| +.++++.+.++++.++..
T Consensus 155 ~d---~~l~~kl~~~r~~~~~~v 174 (181)
T 4b4k_A 155 FH---DDIHDALELRREAIEKDV 174 (181)
T ss_dssp TC---HHHHHHHHHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHHHHHHHHH
Confidence 45 788999988888887543
No 113
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=52.76 E-value=77 Score=26.66 Aligned_cols=40 Identities=10% Similarity=0.130 Sum_probs=33.3
Q ss_pred CCCEEEEEcCC-CCcCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 012678 13 KGRRVILFPLP-LQGHINPMLQLASILYSKGFSITIIHTNF 52 (458)
Q Consensus 13 ~~~~il~~~~~-~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (458)
.+..+.+++.+ +.|=..-++.++..+..+|..|.++.+..
T Consensus 10 ~~G~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~~ 50 (223)
T 2b8t_A 10 KIGWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKI 50 (223)
T ss_dssp -CCEEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCcEEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEecc
Confidence 34567777777 88999999999999999999999997653
No 114
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=51.83 E-value=33 Score=29.47 Aligned_cols=95 Identities=9% Similarity=-0.007 Sum_probs=52.8
Q ss_pred CCEEEEEcCCCCcCH-HHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEecCCCCCCCccCcccHHHHHHHHHHh
Q 012678 14 GRRVILFPLPLQGHI-NPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEVSTENAISLLTVLNDK 92 (458)
Q Consensus 14 ~~~il~~~~~~~GH~-~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (458)
.|||+++..-+.-++ ..+...++.++.-|.+|.+++.++.. ..+ +...+ .. .
T Consensus 1 ~mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~~gp---------------~~i----~~~~d---~~-----~ 53 (245)
T 3qvl_A 1 SVRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPRAGV---------------PSI----EGHFD---EA-----I 53 (245)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCSSSC---------------SSC----CSHHH---HH-----H
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCc---------------hhh----cChhH---HH-----H
Confidence 378888877776555 45666777776668888777654111 001 10011 11 0
Q ss_pred cChhHHHHHHHHhhCCCCCCCeeEEEecCchhhH-HHHHHHcCCCeEEE
Q 012678 93 CVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFA-QTVADTLRLPRIVL 140 (458)
Q Consensus 93 ~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~~~-~~~A~~lgiP~v~~ 140 (458)
....+.+.+.++.+ .++|+||...++..+ ..+.+.+++|++.+
T Consensus 54 a~~~l~~~~~~l~~-----~g~d~iviaCnt~~~l~~lr~~~~iPvigi 97 (245)
T 3qvl_A 54 AAVGVLEQIRAGRE-----QGVDGHVIASFGDPGLLAARELAQGPVIGI 97 (245)
T ss_dssp HHHHHHHHHHHHHH-----HTCSEEEEC-CCCTTHHHHHHHCSSCEEEH
T ss_pred HHHHHHHHHHHHHH-----CCCCEEEEeCCChhHHHHHHHHcCCCEECc
Confidence 11222233344443 468999988877333 44566679998864
No 115
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=51.23 E-value=38 Score=25.95 Aligned_cols=63 Identities=17% Similarity=0.178 Sum_probs=39.0
Q ss_pred hCCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Q 012678 368 EGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEAEGQEMRERIMHLKEKLE 435 (458)
Q Consensus 368 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~ 435 (458)
..+|+|++--..+ ........+ .|+--.+.+.++.++|..+|+.++.. ..++...+++++...
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~-~g~~~~l~kP~~~~~L~~~i~~~~~~---~~~~~~~~~~~~~~~ 136 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQ-DGAYDFIAKPFAADRLVQSARRAEEK---RRLVMENRSLRRAAE 136 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHh-cCCCeEEeCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 4788888754444 333344444 36655555568999999999999976 444444444444443
No 116
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=50.71 E-value=13 Score=30.71 Aligned_cols=37 Identities=8% Similarity=0.010 Sum_probs=31.5
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+.||++...|+.|=.. ...+.+.|.++|++|.++.++
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~ 44 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTK 44 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEch
Confidence 4589988888866664 789999999999999999886
No 117
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=49.38 E-value=96 Score=24.53 Aligned_cols=138 Identities=13% Similarity=0.123 Sum_probs=76.9
Q ss_pred CcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCc
Q 012678 271 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAV 350 (458)
Q Consensus 271 ~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~ 350 (458)
++.|-|-+||.. +....++....|+.++..+-..+..- ...|+.+.+ |+... --...++
T Consensus 3 ~~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa--------HR~p~~~~~----------~~~~a-~~~g~~V 61 (163)
T 3ors_A 3 AMKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSA--------HRTPKMMVQ----------FASEA-RERGINI 61 (163)
T ss_dssp CCCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHHH----------HHHHT-TTTTCCE
T ss_pred CCeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECC--------cCCHHHHHH----------HHHHH-HhCCCcE
Confidence 445677778766 45567788888899888765555432 336665532 11000 0112345
Q ss_pred cccccccCch----hHHHHHhhCCcccccccccchh-hHHHH--HHHHH--hc--ce-ecC--CcccHHHHHHHHHHHhc
Q 012678 351 GGFWTHNGWN----STLESICEGVPMICQPCFGDQL-VNARY--VSHVW--RV--GL-HLE--RKFERREIETAIRRVTV 416 (458)
Q Consensus 351 ~~~I~HgG~~----s~~eal~~GvP~l~~P~~~DQ~-~na~~--v~~~~--G~--G~-~l~--~~~~~~~l~~~i~~ll~ 416 (458)
+|.-+|.. ++..++ .-+|+|.+|....-. ..... +.. + |+ +. .++ ...+..-+...|-.+-
T Consensus 62 --iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~GvPVatV~I~~a~~~nAa~lAa~Il~~~- 136 (163)
T 3ors_A 62 --IIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQ-MPGGIPVATTAIGAAGAKNAGILAARMLSIQ- 136 (163)
T ss_dssp --EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCCEECCSTHHHHHHHHHHHHHHHHTT-
T ss_pred --EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCceEEEEcCCcccHHHHHHHHHHHhCC-
Confidence 88777743 444443 568999999864321 11222 222 2 33 21 233 1345555555555443
Q ss_pred cchhHHHHHHHHHHHHHHHHH
Q 012678 417 EAEGQEMRERIMHLKEKLELS 437 (458)
Q Consensus 417 ~~~~~~~~~~a~~~~~~~~~~ 437 (458)
| +.++++.+.+++++++.
T Consensus 137 d---~~l~~kl~~~r~~~~~~ 154 (163)
T 3ors_A 137 N---PSLVEKLNQYESSLIQK 154 (163)
T ss_dssp C---THHHHHHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHHHHHHHH
Confidence 4 58899998888888753
No 118
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=48.82 E-value=14 Score=30.19 Aligned_cols=38 Identities=8% Similarity=0.043 Sum_probs=31.4
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCC
Q 012678 16 RVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNS 54 (458)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 54 (458)
||++...|+.|=. =...+.+.|.++|++|.++.++...
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~ 41 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSK 41 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGG
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHH
Confidence 7888888886555 6789999999999999999987443
No 119
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=48.66 E-value=1e+02 Score=24.64 Aligned_cols=142 Identities=18% Similarity=0.176 Sum_probs=77.7
Q ss_pred CcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCc
Q 012678 271 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAV 350 (458)
Q Consensus 271 ~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~ 350 (458)
++.|-|-+||.. +....++....|+.++..+-..+..- ...|+.+.+ |+-.. --...++
T Consensus 12 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~Sa--------HR~p~~~~~----------~~~~a-~~~g~~V 70 (174)
T 3kuu_A 12 GVKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSA--------HRTPDRLFS----------FAEQA-EANGLHV 70 (174)
T ss_dssp CCCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTCHHHHHH----------HHHHT-TTTTCSE
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc--------cCCHHHHHH----------HHHHH-HhCCCcE
Confidence 345666677766 45567788888999888765555432 336665532 11100 0122345
Q ss_pred cccccccCch----hHHHHHhhCCcccccccccc-hhhHHHHHHHH-H--hc--ce-ecCC--cccHHHHHHHHHHHhcc
Q 012678 351 GGFWTHNGWN----STLESICEGVPMICQPCFGD-QLVNARYVSHV-W--RV--GL-HLER--KFERREIETAIRRVTVE 417 (458)
Q Consensus 351 ~~~I~HgG~~----s~~eal~~GvP~l~~P~~~D-Q~~na~~v~~~-~--G~--G~-~l~~--~~~~~~l~~~i~~ll~~ 417 (458)
+|.-+|.. ++..++ .-+|+|.+|.... -......+.-- + |+ +. .++. ..+..-+...|-.+ .|
T Consensus 71 --iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa~-~d 146 (174)
T 3kuu_A 71 --IIAGNGGAAHLPGMLAAK-TLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILAL-HD 146 (174)
T ss_dssp --EEEEEESSCCHHHHHHHT-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHHT-TC
T ss_pred --EEEECChhhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHcC-CC
Confidence 88877753 333333 3579999998642 21222222210 1 33 21 1221 23455555444443 45
Q ss_pred chhHHHHHHHHHHHHHHHHHHhh
Q 012678 418 AEGQEMRERIMHLKEKLELSLLE 440 (458)
Q Consensus 418 ~~~~~~~~~a~~~~~~~~~~~~~ 440 (458)
+.++++.+.++++.++...+
T Consensus 147 ---~~l~~kl~~~r~~~~~~v~~ 166 (174)
T 3kuu_A 147 ---TELAGRLAHWRQSQTDDVLD 166 (174)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHHHHHHh
Confidence 78999999999988865533
No 120
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=48.23 E-value=21 Score=26.26 Aligned_cols=36 Identities=11% Similarity=0.175 Sum_probs=26.2
Q ss_pred EEEEEcCCC---CcCHHHHHHHHHHHHhC-CC-EEEEEeCC
Q 012678 16 RVILFPLPL---QGHINPMLQLASILYSK-GF-SITIIHTN 51 (458)
Q Consensus 16 ~il~~~~~~---~GH~~p~l~La~~L~~r-Gh-~Vt~~~~~ 51 (458)
|++++-..+ .......+.+|..+.+. || +|+++-..
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 444444443 34566789999999999 99 99988765
No 121
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=47.66 E-value=8.3 Score=39.42 Aligned_cols=108 Identities=9% Similarity=0.014 Sum_probs=74.9
Q ss_pred eccChhhhhcCCCccccccccCchhHHHHHhhCCcccccccccchhhHHHHHHHHHhcceec----CC--cccHHHHHHH
Q 012678 337 KWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHL----ER--KFERREIETA 410 (458)
Q Consensus 337 ~~ipq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l----~~--~~~~~~l~~~ 410 (458)
++.+-.++|..+++ +||=- ...+.|.+..++|+|.+..-.|++... .. |.=..+ .. -.+.++|.++
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~r-g~y~d~~~~~pg~~~~~~~eL~~~ 676 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----LR-GFYMNYMEDLPGPIYTEPYGLAKE 676 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----CC-SBSSCTTSSSSSCEESSHHHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----cC-CcccChhHhCCCCeECCHHHHHHH
Confidence 55566789989998 99864 368899999999999997766665431 11 332111 11 3578999999
Q ss_pred HHHHhccchhHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 012678 411 IRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHI 455 (458)
Q Consensus 411 i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 455 (458)
|.....+. ..++++.+++.+++.. .+.|.++++.++.+.+..
T Consensus 677 i~~~~~~~--~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~~~~ 718 (729)
T 3l7i_A 677 LKNLDKVQ--QQYQEKIDAFYDRFCS-VDNGKASQYIGDLIHKDI 718 (729)
T ss_dssp HTTHHHHH--HHTHHHHHHHHHHHST-TCCSCHHHHHHHHHHHHH
T ss_pred Hhhhhccc--hhHHHHHHHHHHHhCC-ccCChHHHHHHHHHHhcC
Confidence 98877532 5788888888888753 245666777777766654
No 122
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=47.33 E-value=1.2e+02 Score=28.38 Aligned_cols=138 Identities=14% Similarity=0.062 Sum_probs=75.0
Q ss_pred CCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCC-
Q 012678 270 AKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHP- 348 (458)
Q Consensus 270 ~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~- 348 (458)
..+.|-|-+||.. .....++....++.+|..+-..+.+ .+..|+.+.+ ++-+.. =...
T Consensus 264 ~~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~s--------aHR~p~~~~~----------~~~~~~-~~g~~ 322 (425)
T 2h31_A 264 SQCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTS--------AHKGPDETLR----------IKAEYE-GDGIP 322 (425)
T ss_dssp CCCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTCHHHHHH----------HHHHHH-TTCCC
T ss_pred CCCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeee--------ccCCHHHHHH----------HHHHHH-HCCCC
Confidence 3467777788866 4556777888888888876555543 2336665421 111111 0112
Q ss_pred CccccccccCc----hhHHHHHhhCCcccccccccchhhHHHHHH--H--HHhcceecC-CcccHHHHHHHHHHHhccch
Q 012678 349 AVGGFWTHNGW----NSTLESICEGVPMICQPCFGDQLVNARYVS--H--VWRVGLHLE-RKFERREIETAIRRVTVEAE 419 (458)
Q Consensus 349 ~~~~~I~HgG~----~s~~eal~~GvP~l~~P~~~DQ~~na~~v~--~--~~G~G~~l~-~~~~~~~l~~~i~~ll~~~~ 419 (458)
.| +|.-+|. .++..++ .-+|+|.+|....-......+. . . |+.+.-- ...++.-++..|. -++|
T Consensus 323 ~v--iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~-g~pvatv~~~~nAa~~A~~Il-~~~~-- 395 (425)
T 2h31_A 323 TV--FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPS-GLGCSTVLSPEGSAQFAAQIF-GLSN-- 395 (425)
T ss_dssp EE--EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCS-SCCCEECCCHHHHHHHHHHHH-HTTC--
T ss_pred eE--EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCC-CCceEEecCchHHHHHHHHHH-ccCC--
Confidence 34 7776664 3555554 3689999998532111112111 1 1 2322111 1345555655554 3455
Q ss_pred hHHHHHHHHHHHHHHHH
Q 012678 420 GQEMRERIMHLKEKLEL 436 (458)
Q Consensus 420 ~~~~~~~a~~~~~~~~~ 436 (458)
+.++++.+..+...+.
T Consensus 396 -~~l~~kl~~~~~~~~~ 411 (425)
T 2h31_A 396 -HLVWSKLRASILNTWI 411 (425)
T ss_dssp -HHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 6788888877777664
No 123
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=46.59 E-value=14 Score=31.87 Aligned_cols=39 Identities=23% Similarity=0.172 Sum_probs=32.7
Q ss_pred CCCEEEEEcCC---CCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLP---LQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~---~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+||.+|++.+ +.|-=.-.-.|+..|..||+.|+.+--+
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiD 62 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKID 62 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEE
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecC
Confidence 46999999987 4466788899999999999999997543
No 124
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=46.18 E-value=1.1e+02 Score=24.16 Aligned_cols=137 Identities=12% Similarity=0.109 Sum_probs=73.5
Q ss_pred cEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCcc
Q 012678 272 SVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVG 351 (458)
Q Consensus 272 ~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~ 351 (458)
+.|-|-+||.. +....++....++.++..+-..+... ...|+.+.+ |+....--..+++
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa--------HR~p~~~~~----------~~~~a~~~~~~~V- 61 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA--------HKTAEHVVS----------MLKEYEALDRPKL- 61 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT--------TTCHHHHHH----------HHHHHHTSCSCEE-
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc--------cCCHHHHHH----------HHHHhhhcCCCcE-
Confidence 45666677766 45567778888888888765555432 336665522 1111110001344
Q ss_pred ccccccCch----hHHHHHhhCCcccccccccch-hhHH-HHHHHHH--hccee-cCCcccHHHHHHHHHHHhccchhHH
Q 012678 352 GFWTHNGWN----STLESICEGVPMICQPCFGDQ-LVNA-RYVSHVW--RVGLH-LERKFERREIETAIRRVTVEAEGQE 422 (458)
Q Consensus 352 ~~I~HgG~~----s~~eal~~GvP~l~~P~~~DQ-~~na-~~v~~~~--G~G~~-l~~~~~~~~l~~~i~~ll~~~~~~~ 422 (458)
+|.-+|.. ++..++ .-+|+|.+|...-. .... .-+.. + |+.+. ++...+..-+...|-.+ +| +.
T Consensus 62 -iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dLlS~vq-mp~GvpVatv~~~~nAa~lA~~Il~~-~d---~~ 134 (159)
T 3rg8_A 62 -YITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGADIYSSLR-MPSGISPALVLEPKNAALLAARIFSL-YD---KE 134 (159)
T ss_dssp -EEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTHHHHHHC-CCTTCCCEECCSHHHHHHHHHHHHTT-TC---HH
T ss_pred -EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCccHHHHHh-CCCCCceEEecCchHHHHHHHHHHhC-CC---HH
Confidence 88877753 444443 55799999975321 1111 11112 1 33321 22234555555444433 44 68
Q ss_pred HHHHHHHHHHHHHH
Q 012678 423 MRERIMHLKEKLEL 436 (458)
Q Consensus 423 ~~~~a~~~~~~~~~ 436 (458)
++++.+.++++.++
T Consensus 135 l~~kl~~~r~~~~~ 148 (159)
T 3rg8_A 135 IADSVKSYMESNAQ 148 (159)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888887764
No 125
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=46.01 E-value=10 Score=32.92 Aligned_cols=53 Identities=13% Similarity=0.129 Sum_probs=37.3
Q ss_pred CCCccccccccCchhHHHHHhh---CCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhcc
Q 012678 347 HPAVGGFWTHNGWNSTLESICE---GVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 417 (458)
Q Consensus 347 ~~~~~~~I~HgG~~s~~eal~~---GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 417 (458)
.+++ +|+=||=||+.+++.. ++|++.++.. . +|.- . ++.++++.++++++++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~Gfl---~-~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-LGFL---T-SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-CCSS---C-CBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-CCcc---C-cCCHHHHHHHHHHHHcC
Confidence 4566 9999999999999876 8898888732 1 1111 1 34577777777777765
No 126
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=45.80 E-value=34 Score=30.70 Aligned_cols=35 Identities=17% Similarity=0.158 Sum_probs=25.5
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+++|||+|+-.+. ......++|.++||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcC
Confidence 5689999986653 3455668888899999877764
No 127
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=45.06 E-value=1.7e+02 Score=26.14 Aligned_cols=149 Identities=9% Similarity=-0.012 Sum_probs=74.4
Q ss_pred CCcEEEEEcCccccCC-HHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCC
Q 012678 270 AKSVMYVSFGSIVVVN-VTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHP 348 (458)
Q Consensus 270 ~~~~i~vs~Gs~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~ 348 (458)
++++++++ |...... ..+...+++-+++.+.+-|..+++-.... ...-|. .+........++...
T Consensus 101 g~~~lll~-gpeP~~~w~~f~~~vl~~a~~~gV~~vv~Lggl~~~~---phtrp~----------~V~~~at~~~l~~~~ 166 (319)
T 2p90_A 101 NKPFLMLS-GPEPDLRWGDFSNAVVDLVEKFGVENTICLYAAPMTV---PHTRPT----------VVTAHGNSTDRLKDQ 166 (319)
T ss_dssp CCEEEEEE-EECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEEEESC---CTTSCC----------CEEEEESSGGGCSSC
T ss_pred CCeEEEEE-CCCChHHHHHHHHHHHHHHHHcCCCEEEEEeCccCCC---CCCCCC----------CeEEEeCCHHHHhhh
Confidence 45566665 6555433 44556688888889998888776532110 000110 111111122222211
Q ss_pred Cc--cccccccCchhHH--HHHhhCCccccccccc-------chhhHHHHHHHHH--hcceecCC---cccHHHHHHHHH
Q 012678 349 AV--GGFWTHNGWNSTL--ESICEGVPMICQPCFG-------DQLVNARYVSHVW--RVGLHLER---KFERREIETAIR 412 (458)
Q Consensus 349 ~~--~~~I~HgG~~s~~--eal~~GvP~l~~P~~~-------DQ~~na~~v~~~~--G~G~~l~~---~~~~~~l~~~i~ 412 (458)
.. +-..-.||..++. +|...|+|.+++=... +-+.-|..+-+.+ =+|+.++. .-..+++.+.|+
T Consensus 167 ~~~~~~~~ipggi~glL~~~~~~~Gi~a~~l~~~vphYl~~~pdP~AA~~lL~~l~~l~gl~id~~~L~e~A~~~e~~i~ 246 (319)
T 2p90_A 167 VSLDTRMTVPGSASLMLEKLLKDKGKNVSGYTVHVPHYVSASPYPAATLKLLQSIADSADLNLPLLALERDAEKVHRQLM 246 (319)
T ss_dssp CCCCCCEEECCCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHH
T ss_pred hccccCcEEeccHHHHHHHHHHHCCCCEEEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Confidence 11 0011235666554 4567899998873321 3333343332112 23666665 445777888888
Q ss_pred HHhccchhHHHHHHHHHHHHHH
Q 012678 413 RVTVEAEGQEMRERIMHLKEKL 434 (458)
Q Consensus 413 ~ll~~~~~~~~~~~a~~~~~~~ 434 (458)
++.++. +.+.+-++.+-++.
T Consensus 247 ~l~~~~--~e~~~~V~~LE~~~ 266 (319)
T 2p90_A 247 EQTEES--SEIQRVVGALEQQY 266 (319)
T ss_dssp HHHHHC--HHHHHHHHHHHHHH
T ss_pred HHHHhh--HHHHHHHHHHHhhh
Confidence 888642 45555444444333
No 128
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=44.70 E-value=22 Score=31.14 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=33.1
Q ss_pred CCCCEEEEEcC--CCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 12 KKGRRVILFPL--PLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+.+|+++++. ++-|--.-...||..|+++|..|.++-.+
T Consensus 79 ~~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 79 DSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp TCCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 45677777765 56788999999999999999999999765
No 129
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=44.65 E-value=25 Score=31.54 Aligned_cols=34 Identities=18% Similarity=0.377 Sum_probs=27.2
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.+.|||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 446899999776666 6788999999999998744
No 130
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=44.53 E-value=19 Score=32.30 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=27.0
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+|||+++..+ ....+++++.++||+|.++.+.
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECC
Confidence 4899988876 5678999999999999988764
No 131
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=44.37 E-value=24 Score=27.56 Aligned_cols=34 Identities=24% Similarity=0.535 Sum_probs=25.5
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
..++|+++-. |.+- ..+++.|.++|++|+++...
T Consensus 18 ~~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 4578888843 4443 55789999999999998764
No 132
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=44.04 E-value=17 Score=31.02 Aligned_cols=34 Identities=26% Similarity=0.259 Sum_probs=28.4
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+..|||.|+-.|..|- .||+.|+++||+|+.+..
T Consensus 4 ~~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 4579999999998874 589999999999987654
No 133
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=44.02 E-value=34 Score=21.19 Aligned_cols=32 Identities=25% Similarity=0.412 Sum_probs=23.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 012678 420 GQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHI 455 (458)
Q Consensus 420 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 455 (458)
+..|+++...++.+++ .-|+++..+..+.++|
T Consensus 4 waefkqrlaaiktrlq----alggseaelaafekei 35 (73)
T 2a3d_A 4 WAEFKQRLAAIKTRLQ----ALGGSEAELAAFEKEI 35 (73)
T ss_dssp HHHHHHHHHHHHHHHH----HCSSGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH----HhcCcHHHHHHHHHHH
Confidence 4678999999998888 5666666666666555
No 134
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=43.60 E-value=40 Score=26.00 Aligned_cols=39 Identities=15% Similarity=0.245 Sum_probs=27.5
Q ss_pred CCCEEEEEcCC-CCcCHH--HHHHHHHHHHhCCCEE-EEEeCC
Q 012678 13 KGRRVILFPLP-LQGHIN--PMLQLASILYSKGFSI-TIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~-~~GH~~--p~l~La~~L~~rGh~V-t~~~~~ 51 (458)
..||++|+... -+|+-. -.+.+|+.+.+.||+| .++-..
T Consensus 11 ~~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~ 53 (140)
T 2d1p_A 11 GSMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYR 53 (140)
T ss_dssp CCCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEec
Confidence 36786665444 456544 4688999999999999 777654
No 135
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=43.45 E-value=26 Score=29.67 Aligned_cols=22 Identities=14% Similarity=0.229 Sum_probs=18.8
Q ss_pred HHHHHHHHHHhCCCEEEEEeCC
Q 012678 30 PMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 30 p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
--..+|++|+++|++|+++..+
T Consensus 36 iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 36 MGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHCCCEEEEEECC
Confidence 4567899999999999998764
No 136
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=43.14 E-value=26 Score=29.52 Aligned_cols=34 Identities=15% Similarity=0.181 Sum_probs=26.5
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+||+++++.++.| =-..+|++|+++|++|.++.-
T Consensus 1 ~~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 1 EMKVAVITGASRG---IGEAIARALARDGYALALGAR 34 (235)
T ss_dssp CCCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3678888887743 346889999999999888764
No 137
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=43.10 E-value=17 Score=33.40 Aligned_cols=42 Identities=10% Similarity=0.067 Sum_probs=25.5
Q ss_pred ccccccccCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 4 QKESNVQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 4 ~~~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
++++...+++.|||.|+=.+..| ..+|+.|+++||+|+++..
T Consensus 12 ~~~~~~~Mm~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 12 DLGTENLYFQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp ----------CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred hcccchhhhcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 34444455667899999655433 5788999999999998854
No 138
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=43.10 E-value=24 Score=31.82 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.+||.|+-.++.| |-.+|+.|+++||+|+..=.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 4689999988866 55799999999999998744
No 139
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=42.97 E-value=96 Score=25.80 Aligned_cols=104 Identities=7% Similarity=0.053 Sum_probs=0.0
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhC--CCEEEEEeCCCCCCCCCCC---CCceEEecCCCCCCCccCcccHHHHHHHH
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSK--GFSITIIHTNFNSPNPSNY---PHFSFNSISESLWESEVSTENAISLLTVL 89 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (458)
|||+++.++. |+. +..|.+.+.+. +|+|..+.+.......... .|+.+..++..--.+.
T Consensus 1 ~ri~vl~Sg~-gsn--l~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~~~~~r------------- 64 (212)
T 1jkx_A 1 MNIVVLISGN-GSN--LQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSR------------- 64 (212)
T ss_dssp CEEEEEESSC-CHH--HHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCSSH-------------
T ss_pred CEEEEEEECC-cHH--HHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCcccccch-------------
Q ss_pred HHhcChhHHHHHHHHhhCCCCCCCeeEEEecCch-hhHHHHHHHcCCCeEEEecc
Q 012678 90 NDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 90 ~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 143 (458)
..+.+.+.+.++. .+||+||+-.+. .-...+-......++-++++
T Consensus 65 -----~~~~~~~~~~l~~----~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 65 -----EAYDRELIHEIDM----YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp -----HHHHHHHHHHHGG----GCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -----hhccHHHHHHHHh----cCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
No 140
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=42.75 E-value=16 Score=33.76 Aligned_cols=30 Identities=23% Similarity=0.144 Sum_probs=24.1
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEE
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITII 48 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 48 (458)
.|||+++=.+- --+.+|..|+++||+|+++
T Consensus 1 sm~V~IVGaGp-----aGl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAGI-----GGTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEECCSH-----HHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECcCH-----HHHHHHHHHHhCCCCEEEE
Confidence 48988885553 2488899999999999998
No 141
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=42.56 E-value=25 Score=29.76 Aligned_cols=37 Identities=5% Similarity=-0.005 Sum_probs=30.4
Q ss_pred CCCEEEEEcCC--CCcCHHHHHHHHHHHHhCCCEEEEEe
Q 012678 13 KGRRVILFPLP--LQGHINPMLQLASILYSKGFSITIIH 49 (458)
Q Consensus 13 ~~~~il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (458)
.+||.+|++.. +-|-..-...|++.|+++|++|.++=
T Consensus 2 ~~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 2 NAMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TTCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 46777776665 44889999999999999999999974
No 142
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=42.48 E-value=27 Score=29.68 Aligned_cols=36 Identities=8% Similarity=-0.035 Sum_probs=26.1
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+.|.++++.++.| =-..+|+.|+++|++|+++.-.
T Consensus 5 ~~~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 5 GEARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp -CCCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeCC
Confidence 34567778776642 3467899999999999887653
No 143
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=42.37 E-value=28 Score=30.34 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=24.5
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.|||++. . + |- =-..|++.|.++||+|+.++-.
T Consensus 3 ~~~ilVt-G-a-G~--iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIA-G-C-GD--LGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEE-C-C-SH--HHHHHHHHHHHTTCCEEEEECT
T ss_pred CCcEEEE-C-C-CH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 3577665 3 5 64 4457899999999999999764
No 144
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=41.98 E-value=17 Score=33.04 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=24.8
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|||+++-.|..| ..+|..|+++||+|+++..
T Consensus 3 ~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 3 ESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 45899999665544 3578889999999998854
No 145
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=41.79 E-value=32 Score=30.59 Aligned_cols=83 Identities=13% Similarity=-0.033 Sum_probs=49.0
Q ss_pred CcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCc
Q 012678 271 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAV 350 (458)
Q Consensus 271 ~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~ 350 (458)
+-.++++.-|-.....+.+..+...|++.+..+.+...... ....+ +. .++....++
T Consensus 10 ~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~-----------~~a~~-------~~-----~~~~~~~d~ 66 (304)
T 3s40_A 10 KVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ-----------GDATK-------YC-----QEFASKVDL 66 (304)
T ss_dssp SEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCST-----------THHHH-------HH-----HHHTTTCSE
T ss_pred EEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCc-----------chHHH-------HH-----HHhhcCCCE
Confidence 44566666443333345566777778877776655543221 11110 00 011123455
Q ss_pred cccccccCchhHHHHHh------hCCcccccccc
Q 012678 351 GGFWTHNGWNSTLESIC------EGVPMICQPCF 378 (458)
Q Consensus 351 ~~~I~HgG~~s~~eal~------~GvP~l~~P~~ 378 (458)
+|.-||=||+.|.+. .++|+.++|..
T Consensus 67 --vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 67 --IIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp --EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred --EEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 999999999999864 57899999974
No 146
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=41.60 E-value=44 Score=30.21 Aligned_cols=72 Identities=11% Similarity=0.150 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHH
Q 012678 285 NVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLE 364 (458)
Q Consensus 285 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~e 364 (458)
+.+....+.+++.....+.||...++.. .. ++.++++...+-++|+. ||-..-..+++-
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------~~--------rlL~~lD~~~i~~~PK~--~~GySDiTaL~~ 121 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGYN-----------SN--------GLLKYLDYDLIRENPKF--FCGYSDITALNN 121 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-----------GG--------GGGGGCCHHHHHTSCCE--EEECGGGHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcccccc-----------HH--------HHHhhcChhHHHhCCeE--EEEecchHHHHH
Confidence 4555777889999888888998877641 11 56667766666667777 887777777777
Q ss_pred HHh--hCCccccccc
Q 012678 365 SIC--EGVPMICQPC 377 (458)
Q Consensus 365 al~--~GvP~l~~P~ 377 (458)
+++ .|++.+-=|.
T Consensus 122 al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 122 AIYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHHCBCEEECCC
T ss_pred HHHHhhCCcEEEccc
Confidence 776 4776655454
No 147
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=41.33 E-value=1.3e+02 Score=23.87 Aligned_cols=138 Identities=14% Similarity=0.146 Sum_probs=76.2
Q ss_pred CcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCc
Q 012678 271 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAV 350 (458)
Q Consensus 271 ~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~ 350 (458)
+|.|-|-+||.. +....++....|+.++..+-..+... ...|+.+.+ |+-... -..+++
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa--------HR~p~~~~~----------~~~~a~-~~g~~V 64 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA--------HRTPKETVE----------FVENAD-NRGCAV 64 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHHH----------HHHHHH-HTTEEE
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc--------cCCHHHHHH----------HHHHHH-hCCCcE
Confidence 456777788866 45567788888999888766555442 235665421 111110 122345
Q ss_pred cccccccCch----hHHHHHhhCCccccccccc-chhhHHHHH--HH--HHhcc---eecCC--cccHHHHHHHHHHHhc
Q 012678 351 GGFWTHNGWN----STLESICEGVPMICQPCFG-DQLVNARYV--SH--VWRVG---LHLER--KFERREIETAIRRVTV 416 (458)
Q Consensus 351 ~~~I~HgG~~----s~~eal~~GvP~l~~P~~~-DQ~~na~~v--~~--~~G~G---~~l~~--~~~~~~l~~~i~~ll~ 416 (458)
+|.-+|.. ++..++ .-+|+|.+|... +-......+ .. . |+. +.++. .++..-+...|-. +.
T Consensus 65 --iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~-GvPVatV~I~~a~~~nAa~lAa~Il~-~~ 139 (169)
T 3trh_A 65 --FIAAAGLAAHLAGTIAAH-TLKPVIGVPMAGGSLGGLDALLSTVQMPG-GVPVACTAIGKAGAKNAAILAAQIIA-LQ 139 (169)
T ss_dssp --EEEEECSSCCHHHHHHHT-CSSCEEEEECCCSTTTTHHHHHHHHCCCT-TSCCEECCSTHHHHHHHHHHHHHHHH-TT
T ss_pred --EEEECChhhhhHHHHHhc-CCCCEEEeecCCCCCCCHHHHHHhhcCCC-CCceEEEecCCccchHHHHHHHHHHc-CC
Confidence 88877753 333332 357999999864 222222222 22 1 432 12221 2344445544443 34
Q ss_pred cchhHHHHHHHHHHHHHHHHH
Q 012678 417 EAEGQEMRERIMHLKEKLELS 437 (458)
Q Consensus 417 ~~~~~~~~~~a~~~~~~~~~~ 437 (458)
| +.++++.+.++++.++.
T Consensus 140 d---~~l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 140 D---KSIAQKLVQQRTAKRET 157 (169)
T ss_dssp C---HHHHHHHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHHHHHHHH
Confidence 5 68899998888888753
No 148
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=41.24 E-value=23 Score=27.96 Aligned_cols=36 Identities=14% Similarity=0.110 Sum_probs=30.0
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNF 52 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (458)
..+++++..+. | +-|++.+++.|.++|.+|+++ ...
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r 58 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVT 58 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EEC
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 45788887776 4 999999999999999999999 543
No 149
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=40.79 E-value=46 Score=29.19 Aligned_cols=41 Identities=15% Similarity=0.102 Sum_probs=24.3
Q ss_pred cccCCCCEEEEEcC-CCCcCHHHH--HHHHHHHHhCCCEEEEEe
Q 012678 9 VQQKKGRRVILFPL-PLQGHINPM--LQLASILYSKGFSITIIH 49 (458)
Q Consensus 9 ~~~~~~~~il~~~~-~~~GH~~p~--l~La~~L~~rGh~Vt~~~ 49 (458)
...++.||||++.. |-...++-. -...+.|.++||+|+++-
T Consensus 17 ~~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 17 NLYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp -----CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cchhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 34577899877754 333334432 346778888999999974
No 150
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=39.50 E-value=40 Score=30.42 Aligned_cols=33 Identities=12% Similarity=0.160 Sum_probs=24.2
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.+|||+|+ |--+....+.++|.++||+|..+.+
T Consensus 21 ~~mrIvf~-----G~~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 21 QSMKIAVI-----GQSLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp CCCEEEEE-----CCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEEE-----cCcHHHHHHHHHHHHCCCeEEEEEe
Confidence 34999999 2234445677899999999987665
No 151
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=39.35 E-value=30 Score=33.97 Aligned_cols=40 Identities=10% Similarity=0.080 Sum_probs=36.5
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
..+.+|++.+.++..|-....-++..|..+|++|..++..
T Consensus 96 ~~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~ 135 (579)
T 3bul_A 96 KTNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVM 135 (579)
T ss_dssp CCSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSS
T ss_pred CCCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCC
Confidence 3478999999999999999999999999999999998764
No 152
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=38.51 E-value=26 Score=29.63 Aligned_cols=67 Identities=13% Similarity=0.128 Sum_probs=42.0
Q ss_pred CCccccccccCchhHHHHHhhCCccccccccc-c----------------------hhhHHHHHHHHHhcceecCCcccH
Q 012678 348 PAVGGFWTHNGWNSTLESICEGVPMICQPCFG-D----------------------QLVNARYVSHVWRVGLHLERKFER 404 (458)
Q Consensus 348 ~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~-D----------------------Q~~na~~v~~~~G~G~~l~~~~~~ 404 (458)
+++ +|+.||-......- .++|+|-++..+ | ....+..+.+-+|+-+....-.++
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~~ 140 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITE 140 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEeCCH
Confidence 566 99999998888875 579999999863 3 222233333322333222222457
Q ss_pred HHHHHHHHHHhcc
Q 012678 405 REIETAIRRVTVE 417 (458)
Q Consensus 405 ~~l~~~i~~ll~~ 417 (458)
+++.+.|+++.++
T Consensus 141 ee~~~~i~~l~~~ 153 (225)
T 2pju_A 141 EDARGQINELKAN 153 (225)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHC
Confidence 7777777777654
No 153
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=38.26 E-value=25 Score=29.59 Aligned_cols=33 Identities=15% Similarity=0.137 Sum_probs=24.5
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
||+++++.++.| =-..+|++|+++|++|.++.-
T Consensus 1 Mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 33 (230)
T 3guy_A 1 MSLIVITGASSG---LGAELAKLYDAEGKATYLTGR 33 (230)
T ss_dssp --CEEEESTTSH---HHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEecCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 677888887742 346889999999999888765
No 154
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=38.19 E-value=18 Score=27.58 Aligned_cols=32 Identities=13% Similarity=0.090 Sum_probs=23.9
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+||+++-. |.+ -..+|+.|.++||+|+++...
T Consensus 7 ~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 46777643 443 467899999999999988653
No 155
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=38.00 E-value=39 Score=28.83 Aligned_cols=33 Identities=15% Similarity=0.044 Sum_probs=25.2
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
||+++++.++. - =-..+|++|+++|++|+++.-
T Consensus 1 mk~vlVTGas~-g--IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGCAT-G--IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 56778887763 2 346789999999999988764
No 156
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=37.98 E-value=1.1e+02 Score=21.98 Aligned_cols=47 Identities=9% Similarity=0.167 Sum_probs=32.2
Q ss_pred hCCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhc
Q 012678 368 EGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTV 416 (458)
Q Consensus 368 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~ 416 (458)
..+|++++--..+ .....+..+ .|+--.+.+.++.++|.++|+++++
T Consensus 75 ~~~pii~~s~~~~-~~~~~~~~~-~Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 75 KRIPVIVLTAKGG-EEDESLALS-LGARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp TTSCEEEEESCCS-HHHHHHHHH-TTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEEecCCc-hHHHHHHHh-cChhhhccCCCCHHHHHHHHHHHhc
Confidence 3578887754444 334444555 3776666667899999999999875
No 157
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=37.96 E-value=24 Score=33.70 Aligned_cols=99 Identities=16% Similarity=0.142 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEecC--CCCC---CCccCcccHHHHHH
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSIS--ESLW---ESEVSTENAISLLT 87 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~ 87 (458)
.+||-+|++. .+=.-++.+|+.|.+.|+++. ++..-.....+ .|+.+..+. .++| .++..+..+.-.-.
T Consensus 8 ~~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e-~GI~v~~V~~vTgfPEil~GRVKTLHP~ihgG 81 (523)
T 3zzm_A 8 RPIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIAD-TGIPVTPVEQLTGFPEVLDGRVKTLHPRVHAG 81 (523)
T ss_dssp CCCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHT-TTCCCEEHHHHHSCCCCTTTTSSSCSHHHHHH
T ss_pred ccccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHH-cCCceeeccccCCCchhhCCccccCCchhhhh
Confidence 3455555555 334458899999999999965 33211111221 455555543 1333 34455555544333
Q ss_pred HHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCc
Q 012678 88 VLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAI 122 (458)
Q Consensus 88 ~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~ 122 (458)
.+.++-. .+..+++.+..- .+.|+||++.+
T Consensus 82 iLa~r~~---~~h~~~l~~~~i--~~iDlVvvNLY 111 (523)
T 3zzm_A 82 LLADLRK---SEHAAALEQLGI--EAFELVVVNLY 111 (523)
T ss_dssp HHCCTTS---HHHHHHHHHHTC--CCCSEEEEECC
T ss_pred hccCCCC---HHHHHHHHHCCC--CceeEEEEeCC
Confidence 4333222 233344443222 57899999964
No 158
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=37.79 E-value=29 Score=25.38 Aligned_cols=44 Identities=14% Similarity=0.017 Sum_probs=28.9
Q ss_pred ccccccCCCCEEEEEcCCCCcCHHHHH-HHHHHHHhCCCE-EEEEe
Q 012678 6 ESNVQQKKGRRVILFPLPLQGHINPML-QLASILYSKGFS-ITIIH 49 (458)
Q Consensus 6 ~~~~~~~~~~~il~~~~~~~GH~~p~l-~La~~L~~rGh~-Vt~~~ 49 (458)
+......+.+||+++|..|.|+-.-+. .|-+.+.++|.+ +.+-.
T Consensus 10 ~~~~~~~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~ 55 (110)
T 3czc_A 10 GQQMGRGSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESAS 55 (110)
T ss_dssp --------CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred cccccccCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 333344445789999999998888777 777788888987 65543
No 159
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=37.45 E-value=23 Score=32.34 Aligned_cols=41 Identities=24% Similarity=0.254 Sum_probs=31.7
Q ss_pred CCCCE-EEEE-cCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 012678 12 KKGRR-VILF-PLPLQGHINPMLQLASILYSKGFSITIIHTNF 52 (458)
Q Consensus 12 ~~~~~-il~~-~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (458)
.++|+ |+|+ .-|+-|-..-...||..|+++|++|.++..+.
T Consensus 22 ~~~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 22 KKDGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp SSCSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred ccCCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 34454 4433 33566999999999999999999999999864
No 160
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=37.33 E-value=23 Score=31.98 Aligned_cols=40 Identities=13% Similarity=0.126 Sum_probs=26.6
Q ss_pred ccccccCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 6 ESNVQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 6 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.--+-.--.|||.|+-.|..| ..+|..|++.||+|+++..
T Consensus 6 ~~~~~~~~~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 6 IHHHHHHMEMRFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp --------CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred ccccccccCCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 333333446899999776655 5788999999999998865
No 161
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=37.10 E-value=46 Score=28.29 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|.++++.++. - =-..+|++|+++|++|+++.-
T Consensus 14 ~~k~vlVTGas~-g--IG~~ia~~l~~~G~~V~~~~r 47 (247)
T 1uzm_A 14 VSRSVLVTGGNR-G--IGLAIAQRLAADGHKVAVTHR 47 (247)
T ss_dssp CCCEEEETTTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 346788887763 2 346789999999999988765
No 162
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=37.03 E-value=1.8e+02 Score=24.02 Aligned_cols=36 Identities=25% Similarity=0.341 Sum_probs=29.9
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.++|+.+++. +-.|..+.--..|.++|++|.-+++.
T Consensus 24 ~~Lr~avVCa---SN~NRSMEAH~~L~k~Gf~V~SfGTG 59 (214)
T 4h3k_B 24 SPLRVAVVSS---SNQNRSMEAHNILSKRGFSVRSFGTG 59 (214)
T ss_dssp --CEEEEEES---SSSSHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCCeEEEECC---CCcchhHHHHHHHHHCCCceEeecCC
Confidence 4689999987 45788888889999999999999986
No 163
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=37.03 E-value=50 Score=27.14 Aligned_cols=33 Identities=15% Similarity=0.237 Sum_probs=23.3
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
|||++. |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 575443 3335443 57899999999999998763
No 164
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=36.70 E-value=34 Score=31.54 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=29.3
Q ss_pred CCCEEEEEcCCCCc-C---HHHHHHHHHHH-HhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQG-H---INPMLQLASIL-YSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~G-H---~~p~l~La~~L-~~rGh~Vt~~~~ 50 (458)
.+|||+++..+-.+ | +.....++++| .++||+|+.+-.
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 36899999776444 2 34578899999 999999999864
No 165
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=36.41 E-value=31 Score=25.24 Aligned_cols=40 Identities=5% Similarity=-0.110 Sum_probs=28.0
Q ss_pred cCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
..+.|||+++|..|.+--.-.-.+-++..++|.+|.+...
T Consensus 3 ~~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~ 42 (108)
T 3nbm_A 3 ASKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSG 42 (108)
T ss_dssp --CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred cccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEc
Confidence 4568999999999975555445555555667999888653
No 166
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=36.37 E-value=59 Score=27.29 Aligned_cols=35 Identities=17% Similarity=0.140 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCC-CEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKG-FSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~ 51 (458)
.|+.++++.++ |-+ -..|+++|+++| |+|+.+.-.
T Consensus 22 ~mk~vlVtGat-G~i--G~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 22 HMKNVLILGAG-GQI--ARHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp CCEEEEEETTT-SHH--HHHHHHHHTTCTTEEEEEEESS
T ss_pred cccEEEEEeCC-cHH--HHHHHHHHHhCCCceEEEEEcC
Confidence 46777777655 433 357899999999 999988754
No 167
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=36.04 E-value=22 Score=32.53 Aligned_cols=35 Identities=17% Similarity=0.161 Sum_probs=28.2
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+..|||.|+-.|..| ..+|..|+++||+|++....
T Consensus 27 ~~~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 27 PFKHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCCSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred ccCCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 456899998777655 46889999999999998763
No 168
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=35.87 E-value=2e+02 Score=25.23 Aligned_cols=107 Identities=11% Similarity=0.062 Sum_probs=57.1
Q ss_pred cCCCCEEEEEcCCCCcCHHHHHHHHHHHHhC--CCEEEEEeCCC--CCCCCCCCCCceEEecCCCCCCCccCcccHHHHH
Q 012678 11 QKKGRRVILFPLPLQGHINPMLQLASILYSK--GFSITIIHTNF--NSPNPSNYPHFSFNSISESLWESEVSTENAISLL 86 (458)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (458)
..+++||+++.++. ||-. ..|...-.+- ..+|..+.+.. .....+...|+.+..+|.... ..
T Consensus 86 ~~~~~ri~vl~Sg~-g~nl--~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~~gIp~~~~~~~~~----~r------- 151 (288)
T 3obi_A 86 RETRRKVMLLVSQS-DHCL--ADILYRWRVGDLHMIPTAIVSNHPRETFSGFDFGDIPFYHFPVNKD----TR------- 151 (288)
T ss_dssp TTSCEEEEEEECSC-CHHH--HHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTTTTCCEEECCCCTT----TH-------
T ss_pred cCCCcEEEEEEcCC-CCCH--HHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHHcCCCEEEeCCCcc----cH-------
Confidence 35678999988887 6532 3444443322 35777766533 222233346788887764210 00
Q ss_pred HHHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCch-hhHHHHHHHcCCCeEEEecc
Q 012678 87 TVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 87 ~~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 143 (458)
...... +++.+.+ .+||+||.-.+. .-...+-..+.-.++-++++
T Consensus 152 ----~~~~~~---~~~~l~~-----~~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 152 ----RQQEAA---ITALIAQ-----THTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp ----HHHHHH---HHHHHHH-----HTCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred ----HHHHHH---HHHHHHh-----cCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
Confidence 000112 2233332 579999988765 33344555555566766666
No 169
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=35.84 E-value=56 Score=29.42 Aligned_cols=71 Identities=10% Similarity=0.119 Sum_probs=46.2
Q ss_pred CHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHH
Q 012678 285 NVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLE 364 (458)
Q Consensus 285 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~e 364 (458)
+.+....+.+++.....+.||...++.. .. ++.++++...+-.+|+. ||-..-..+++-
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------~~--------rlL~~LD~~~i~~~PK~--~~GySDiT~L~~ 121 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGFN-----------SN--------QLLPYLDYDLISENPKI--LCGFSDITALAT 121 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-----------GG--------GGGGGCCHHHHHHSCCE--EEECTTHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCchh-----------HH--------HHhhhcchhhhccCCeE--EEecccccHHHH
Confidence 4556777889999888899998876541 11 45666666666667766 776666666666
Q ss_pred HHh--hCCcccccc
Q 012678 365 SIC--EGVPMICQP 376 (458)
Q Consensus 365 al~--~GvP~l~~P 376 (458)
+++ .|+..+.=|
T Consensus 122 al~~~~g~~t~hGp 135 (327)
T 4h1h_A 122 AIYTQTELITYSGA 135 (327)
T ss_dssp HHHHHHCBCEEECC
T ss_pred HHHHhcCeEEEeCc
Confidence 664 344433333
No 170
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=35.39 E-value=86 Score=24.60 Aligned_cols=38 Identities=5% Similarity=0.039 Sum_probs=30.3
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
++|||+++..++. ...-+....+.|.+.|++|.++++.
T Consensus 1 ~~~ki~il~~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~ 38 (168)
T 3l18_A 1 ASMKVLFLSADGF-EDLELIYPLHRIKEEGHEVYVASFQ 38 (168)
T ss_dssp CCCEEEEECCTTB-CHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEEeCCCc-cHHHHHHHHHHHHHCCCEEEEEECC
Confidence 3589999998874 4455667778888899999999885
No 171
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=35.35 E-value=29 Score=30.66 Aligned_cols=37 Identities=5% Similarity=0.148 Sum_probs=27.9
Q ss_pred CEEEEEcCCCCcC---HHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGH---INPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH---~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
|||+++..+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 5999998874221 234567999999999999998763
No 172
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=35.25 E-value=14 Score=33.07 Aligned_cols=34 Identities=18% Similarity=0.289 Sum_probs=25.4
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhC-----C-CEEEEEeC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSK-----G-FSITIIHT 50 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r-----G-h~Vt~~~~ 50 (458)
..+|||.|+-.|..| ..+|..|+++ | |+|+++..
T Consensus 6 ~~~m~I~iiG~G~mG-----~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 6 QQPIKIAVFGLGGVG-----GYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp -CCEEEEEECCSHHH-----HHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHhCccccCCCCCEEEEEc
Confidence 345899998766655 3568888888 9 99998854
No 173
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=35.25 E-value=2.2e+02 Score=24.51 Aligned_cols=32 Identities=22% Similarity=0.220 Sum_probs=25.0
Q ss_pred CCeeEEE-ecCch-hhHHHHHHHcCCCeEEEecc
Q 012678 112 EPVTCLI-TDAIW-HFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 112 ~~pDlvI-~D~~~-~~~~~~A~~lgiP~v~~~~~ 143 (458)
..||+|| .|+.. .-++.=|.++|||.|.+.-+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 3688886 66644 67888899999999998665
No 174
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=35.21 E-value=1.4e+02 Score=23.93 Aligned_cols=112 Identities=8% Similarity=-0.038 Sum_probs=61.6
Q ss_pred CcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCC-chhHHHhhcCCcce---eeccChhhhhc
Q 012678 271 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPL-PKGFLEMLDGRGHI---VKWAPQQEVLA 346 (458)
Q Consensus 271 ~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~---~~~ipq~~ll~ 346 (458)
+.+++.-.|+.... ....+++.|.+.+..+-.++..... +-+ ++.+. .+.+.++. ..|+++..+-.
T Consensus 6 k~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A~------~fi~~~~l~-~l~~~v~~~~~~~~~~hi~l~~ 75 (175)
T 3qjg_A 6 ENVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNGR------KFINGEILK-QFCDNYYDEFEDPFLNHVDIAN 75 (175)
T ss_dssp CEEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGGG------GGSCHHHHH-HHCSCEECTTTCTTCCHHHHHH
T ss_pred CEEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCHH------HHhhHHHHH-HhcCCEEecCCCCccccccccc
Confidence 44666666776653 2455777788777776555554321 112 23332 22222221 13466666655
Q ss_pred CCCccccccccCchhHHH-------------HHhhCCccccccccc----ch---hhHHHHHHHHHhc
Q 012678 347 HPAVGGFWTHNGWNSTLE-------------SICEGVPMICQPCFG----DQ---LVNARYVSHVWRV 394 (458)
Q Consensus 347 ~~~~~~~I~HgG~~s~~e-------------al~~GvP~l~~P~~~----DQ---~~na~~v~~~~G~ 394 (458)
.+++ ++|.-+-+||+.. +++.++|++++|-.. .. ..|-.++.+ +|+
T Consensus 76 ~aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~ 141 (175)
T 3qjg_A 76 KHDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGV 141 (175)
T ss_dssp TCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTC
T ss_pred hhCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCC
Confidence 5654 3666677665543 477789999999543 22 345566666 465
No 175
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=35.19 E-value=25 Score=31.14 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=24.4
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|||+|+-.|..| ..+|..|+++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 3799988655444 4678999999999999854
No 176
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=35.15 E-value=84 Score=22.71 Aligned_cols=38 Identities=8% Similarity=-0.016 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+||+++|..|.|--.-.-.+-+.+.++|.++.+-..+
T Consensus 3 mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 45899999999877777778888899999998876654
No 177
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=34.96 E-value=26 Score=30.62 Aligned_cols=31 Identities=10% Similarity=0.094 Sum_probs=24.1
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
|||.|+-.|..| ..+|..|+++||+|+++..
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEc
Confidence 678887655544 4788999999999999855
No 178
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=34.92 E-value=51 Score=28.24 Aligned_cols=35 Identities=23% Similarity=0.256 Sum_probs=26.8
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
..||.++++.++. -+ -..+|++|+++|++|+++..
T Consensus 5 ~~~k~vlVTGas~-gI--G~~~a~~l~~~G~~v~~~~~ 39 (264)
T 3i4f_A 5 RFVRHALITAGTK-GL--GKQVTEKLLAKGYSVTVTYH 39 (264)
T ss_dssp -CCCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred cccCEEEEeCCCc-hh--HHHHHHHHHHCCCEEEEEcC
Confidence 3568888888774 22 46899999999999998755
No 179
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=34.83 E-value=56 Score=26.92 Aligned_cols=33 Identities=6% Similarity=0.169 Sum_probs=23.1
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
|||++. |+.|.+ -..|+++|.++||+|+.++-.
T Consensus 1 MkilVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVL--GATGRA--GSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCCHH--HHHHHHHHHHCCCEEEEEEec
Confidence 564443 333544 367899999999999998753
No 180
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=34.81 E-value=1e+02 Score=29.19 Aligned_cols=87 Identities=13% Similarity=0.088 Sum_probs=50.8
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCCCCceEEecCCCCCCCccCcccHHHHHHHHHHhc
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEVSTENAISLLTVLNDKC 93 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (458)
..|++++.- -.-.+.+++-|.+-|.+|+.+.+........+ . + .+.....|..
T Consensus 313 Gkrv~i~~~-----~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~---~-----~----~~~v~~~D~~---------- 365 (458)
T 3pdi_B 313 SARTAIAAD-----PDLLLGFDALLRSMGAHTVAAVVPARAAALVD---S-----P----LPSVRVGDLE---------- 365 (458)
T ss_dssp TCEEEEECC-----HHHHHHHHHHHHTTTCEEEEEEESSCCSCCTT---T-----T----SSCEEESHHH----------
T ss_pred CCEEEEECC-----cHHHHHHHHHHHHCCCEEEEEEECCCChhhhh---C-----c----cCcEEeCCHH----------
Confidence 347777533 34557888889888999999887542211111 0 0 0000011111
Q ss_pred ChhHHHHHHHHhhCCCCCCCeeEEEecCchhhHHHHHHHcCCCeEEE
Q 012678 94 VVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVL 140 (458)
Q Consensus 94 ~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~ 140 (458)
.+.+.+.+ .+||++|.+.. ...+|+++|||++.+
T Consensus 366 --~le~~i~~--------~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 --DLEHAARA--------GQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp --HHHHHHHH--------HTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred --HHHHHHHh--------cCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 12222222 47999998854 457899999999874
No 181
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=34.65 E-value=75 Score=23.28 Aligned_cols=39 Identities=10% Similarity=0.106 Sum_probs=31.0
Q ss_pred CCCCEEEEEcCCCCcCHHH-HHHHHHHHHhCCCEEEEEeC
Q 012678 12 KKGRRVILFPLPLQGHINP-MLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~ 50 (458)
.+.+||+++|..|.|.-.- ...|-+.+.++|.++.+-..
T Consensus 19 ~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~ 58 (113)
T 1tvm_A 19 GSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQC 58 (113)
T ss_dssp CSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 3456899999999999774 67888888889998766443
No 182
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=34.58 E-value=71 Score=28.52 Aligned_cols=74 Identities=14% Similarity=0.194 Sum_probs=52.9
Q ss_pred CCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhc-CCCccccccccCchhH
Q 012678 284 VNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLA-HPAVGGFWTHNGWNST 362 (458)
Q Consensus 284 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~-~~~~~~~I~HgG~~s~ 362 (458)
.+.+....+.+++.....+.||...++.. .. ++.++++...+-. +|+. ||-+.-...+
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGGyg-----------a~--------rlLp~LD~~~i~~a~PK~--~iGySDiTaL 122 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGGYG-----------CG--------QLLPGLDWGRLQAASPRP--LIGFSDISVL 122 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCSSC-----------GG--------GGTTTCCHHHHHHSCCCC--EEECGGGHHH
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCCcC-----------HH--------HHhhccchhhhhccCCCE--EEEEchhHHH
Confidence 34556777889999888889998877641 11 5667776666665 7877 8888888888
Q ss_pred HHHHh-hCCcccccccc
Q 012678 363 LESIC-EGVPMICQPCF 378 (458)
Q Consensus 363 ~eal~-~GvP~l~~P~~ 378 (458)
+-+++ .|++.+-=|+.
T Consensus 123 ~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 123 LSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHHTTCCEEECCCG
T ss_pred HHHHHHcCCcEEECHhh
Confidence 88886 37766665543
No 183
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=34.29 E-value=62 Score=29.07 Aligned_cols=39 Identities=5% Similarity=0.079 Sum_probs=26.9
Q ss_pred HHHHHhhCCCCCCCeeEEEecCchhhHHHHHHHcCCCeEEEecc
Q 012678 100 CLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 100 ~l~~l~~~~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~ 143 (458)
-++++++ .+||+||..........--+..|||++.+...
T Consensus 108 n~E~i~a-----l~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~ 146 (335)
T 4hn9_A 108 NTEACVA-----ATPDVVFLPMKLKKTADTLESLGIKAVVVNPE 146 (335)
T ss_dssp CHHHHHH-----TCCSEEEEEGGGHHHHHHHHHTTCCEEEECCC
T ss_pred CHHHHHh-----cCCCEEEEeCcchhHHHHHHHcCCCEEEEcCC
Confidence 4566766 68999998764333344446679999998654
No 184
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=34.08 E-value=57 Score=29.11 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=24.3
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
..|+|++. |+.|.+ -..|++.|.++||+|+.++-.
T Consensus 12 ~~M~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVL--GATGLL--GHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEECT
T ss_pred cCCEEEEE--CCCcHH--HHHHHHHHHHCCCEEEEEecC
Confidence 34776554 333544 356789999999999998753
No 185
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=34.03 E-value=50 Score=29.75 Aligned_cols=81 Identities=11% Similarity=-0.136 Sum_probs=47.5
Q ss_pred CcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCc
Q 012678 271 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAV 350 (458)
Q Consensus 271 ~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~ 350 (458)
+-.|+++..+... +.+..+...|++.+..+.+...... ....+ + -...+...+++
T Consensus 31 ~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~-----------~~~~~-------~----~~~~~~~~~d~ 85 (332)
T 2bon_A 31 ASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEK-----------GDAAR-------Y----VEEARKFGVAT 85 (332)
T ss_dssp CEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCST-----------THHHH-------H----HHHHHHHTCSE
T ss_pred eEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCc-----------chHHH-------H----HHHHHhcCCCE
Confidence 3345555444322 4567788888888877655443211 11100 0 01122234566
Q ss_pred cccccccCchhHHHHH--------hhCCcccccccc
Q 012678 351 GGFWTHNGWNSTLESI--------CEGVPMICQPCF 378 (458)
Q Consensus 351 ~~~I~HgG~~s~~eal--------~~GvP~l~~P~~ 378 (458)
+|.-||=||+.|++ ..++|+.++|..
T Consensus 86 --vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 86 --VIAGGGDGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp --EEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred --EEEEccchHHHHHHHHHhhcccCCCCeEEEecCc
Confidence 99999999999985 357899999974
No 186
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=34.02 E-value=36 Score=29.14 Aligned_cols=32 Identities=9% Similarity=-0.104 Sum_probs=24.1
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEe
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIH 49 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (458)
||+++++.++.| + -..+|+.|+++|++|+++.
T Consensus 1 Mk~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~ 32 (254)
T 1zmt_A 1 MSTAIVTNVKHF-G--GMGSALRLSEAGHTVACHD 32 (254)
T ss_dssp -CEEEESSTTST-T--HHHHHHHHHHTTCEEEECC
T ss_pred CeEEEEeCCCch-H--HHHHHHHHHHCCCEEEEEe
Confidence 677888887743 3 3578999999999988764
No 187
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=33.94 E-value=12 Score=35.72 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=27.1
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
..|||+++-.|-.| ..||+.|.+.||+|+++-..
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 47999888666544 46899999999999999653
No 188
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=33.69 E-value=23 Score=27.08 Aligned_cols=33 Identities=15% Similarity=0.152 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+.||+++-++.. -..+|+.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~-----G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRV-----GSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHH-----HHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHH-----HHHHHHHHHHCCCCEEEEECC
Confidence 457888755433 357899999999999999764
No 189
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=33.67 E-value=1.8e+02 Score=23.08 Aligned_cols=140 Identities=11% Similarity=0.107 Sum_probs=76.8
Q ss_pred cEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCcc
Q 012678 272 SVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVG 351 (458)
Q Consensus 272 ~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~ 351 (458)
|.|-|-+||.. +....++....|+.++..+-..+..- ...|+.+.+ |+.... -..+++
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa--------HRtp~~l~~----------~~~~~~-~~g~~V- 63 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSA--------HRTPDKMFD----------YAETAK-ERGLKV- 63 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT--------TTCHHHHHH----------HHHHTT-TTTCCE-
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcC--------cCCHHHHHH----------HHHHHH-hCCCcE-
Confidence 56777788866 45567778888888887665555432 235665532 111110 012345
Q ss_pred ccccccCch----hHHHHHhhCCcccccccccc-hhhHHHH--HHHHH--hccee---cCC--cccHHHHHHHHHHHhcc
Q 012678 352 GFWTHNGWN----STLESICEGVPMICQPCFGD-QLVNARY--VSHVW--RVGLH---LER--KFERREIETAIRRVTVE 417 (458)
Q Consensus 352 ~~I~HgG~~----s~~eal~~GvP~l~~P~~~D-Q~~na~~--v~~~~--G~G~~---l~~--~~~~~~l~~~i~~ll~~ 417 (458)
+|.=+|.. ++..++ .-+|+|.+|.... -...... +.. + |+|+. ++. .++..-+...|-.+ .|
T Consensus 64 -iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~gvpVatV~I~~ag~~nAa~lAa~Il~~-~d 139 (166)
T 3oow_A 64 -IIAGAGGAAHLPGMVAAK-TTLPVLGVPVKSSTLNGQDSLLSIVQ-MPAGIPVATFAIGMAGAKNAALFAASILQH-TD 139 (166)
T ss_dssp -EEEEECSSCCHHHHHHHT-CSSCEEEEECCCTTTTTHHHHHHHHT-CCTTSCCEECCSTHHHHHHHHHHHHHHHGG-GC
T ss_pred -EEEECCcchhhHHHHHhc-cCCCEEEeecCcCCCCCHHHHHHHhc-CCCCCceEEEecCCccchHHHHHHHHHHcC-CC
Confidence 88877753 333333 3579999998542 1122212 222 2 32321 221 23444444444433 45
Q ss_pred chhHHHHHHHHHHHHHHHHHHhh
Q 012678 418 AEGQEMRERIMHLKEKLELSLLE 440 (458)
Q Consensus 418 ~~~~~~~~~a~~~~~~~~~~~~~ 440 (458)
+.++++.+.++++.++...+
T Consensus 140 ---~~l~~kl~~~r~~~~~~v~~ 159 (166)
T 3oow_A 140 ---INIAKALAEFRAEQTRFVLE 159 (166)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHHHHHHh
Confidence 78999999999988865433
No 190
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=33.63 E-value=32 Score=31.18 Aligned_cols=40 Identities=20% Similarity=0.141 Sum_probs=32.5
Q ss_pred CCCCEEEEEc-CCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 12 KKGRRVILFP-LPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+.++|+|+. -|+-|-..-...||..|+++|++|.++..+
T Consensus 13 ~~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D 53 (334)
T 3iqw_A 13 QRSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTD 53 (334)
T ss_dssp CTTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECC
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 3445666555 456699999999999999999999999886
No 191
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=33.59 E-value=16 Score=30.55 Aligned_cols=32 Identities=22% Similarity=0.354 Sum_probs=24.0
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
|||+++-. |. --..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~---G~--~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGG---ET--TAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECC---HH--HHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CH--HHHHHHHHHHhCCCeEEEEECC
Confidence 67777643 33 3567899999999999999753
No 192
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=33.51 E-value=73 Score=26.01 Aligned_cols=37 Identities=5% Similarity=0.073 Sum_probs=25.9
Q ss_pred CCCCEEEEEcCCCCcC----HHHHHHHHHHHHhCCCEEEEEe
Q 012678 12 KKGRRVILFPLPLQGH----INPMLQLASILYSKGFSITIIH 49 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~ 49 (458)
..+|+|.+++... +. ..-...|++.|+++||.|..=.
T Consensus 11 ~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GG 51 (189)
T 3sbx_A 11 PGRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGG 51 (189)
T ss_dssp --CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECC
Confidence 3458999998766 43 3456788888899999865543
No 193
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=33.26 E-value=32 Score=30.53 Aligned_cols=41 Identities=12% Similarity=0.242 Sum_probs=32.8
Q ss_pred CCCCEEEEEcC--CCCcCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 012678 12 KKGRRVILFPL--PLQGHINPMLQLASILYSKGFSITIIHTNF 52 (458)
Q Consensus 12 ~~~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (458)
.+.+|+++++. ++-|--.-...||..|+++|..|.++-.+.
T Consensus 101 ~~~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 101 ETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp SCSCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 34567666665 567899999999999999999999997653
No 194
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=33.11 E-value=46 Score=28.79 Aligned_cols=32 Identities=13% Similarity=0.076 Sum_probs=25.1
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 16 RVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
|+++++.++.| =-..+|+.|+++|++|+++.-
T Consensus 12 k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARR---IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 67888877643 346789999999999998865
No 195
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=33.07 E-value=86 Score=23.22 Aligned_cols=49 Identities=8% Similarity=0.094 Sum_probs=29.8
Q ss_pred hCCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhcc
Q 012678 368 EGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 417 (458)
Q Consensus 368 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 417 (458)
..+|+|++--..|.....+.+... |+--.+.+.++.++|..+|++++..
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~~-ga~~~l~KP~~~~~L~~~i~~~~~~ 119 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAINDA-GIHQFLTKPWHPEQLLSSARNAARM 119 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHHT-TCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHhh-chhhhccCCCCHHHHHHHHHHHHHH
Confidence 356777765444433333333431 4533444458999999999999865
No 196
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=32.65 E-value=51 Score=28.16 Aligned_cols=34 Identities=9% Similarity=-0.024 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 6 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 6 RNATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp CSCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578888887743 356899999999999988765
No 197
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=32.63 E-value=21 Score=29.46 Aligned_cols=30 Identities=7% Similarity=0.059 Sum_probs=24.6
Q ss_pred CCCccccccccCchhHHHHHhhCCccccccccc
Q 012678 347 HPAVGGFWTHNGWNSTLESICEGVPMICQPCFG 379 (458)
Q Consensus 347 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 379 (458)
.+++ +|+.||-......- .++|+|-++..+
T Consensus 51 ~~dV--IISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 51 EVDA--IISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeE--EEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 3455 99999998888875 579999999864
No 198
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=32.50 E-value=44 Score=28.77 Aligned_cols=39 Identities=21% Similarity=0.273 Sum_probs=30.4
Q ss_pred CCCCEEEEEcCC--CCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 12 KKGRRVILFPLP--LQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+++|++.+..+ +-|-..-...||..|+ +|++|.++-.+
T Consensus 24 ~~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D 64 (267)
T 3k9g_A 24 NKKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMD 64 (267)
T ss_dssp --CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEEC
T ss_pred CCCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECC
Confidence 456787777554 5688889999999999 99999998664
No 199
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=32.33 E-value=48 Score=28.56 Aligned_cols=38 Identities=13% Similarity=0.136 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCCC--CcCHHHHHHHHHHHHhCCCEEEEEe
Q 012678 12 KKGRRVILFPLPL--QGHINPMLQLASILYSKGFSITIIH 49 (458)
Q Consensus 12 ~~~~~il~~~~~~--~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (458)
.++|+.+|++... -|=..-.+.|++.|.++|++|.++=
T Consensus 23 ~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 23 QSHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp CSSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 4568877776654 4888899999999999999999975
No 200
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=32.19 E-value=48 Score=29.13 Aligned_cols=33 Identities=18% Similarity=0.261 Sum_probs=24.4
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
++|||.|+-.|..|. .+|+.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 468999996666554 468888899999987643
No 201
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=32.09 E-value=17 Score=18.21 Aligned_cols=17 Identities=24% Similarity=0.583 Sum_probs=13.8
Q ss_pred CchhHHHHHhhCCcccc
Q 012678 358 GWNSTLESICEGVPMIC 374 (458)
Q Consensus 358 G~~s~~eal~~GvP~l~ 374 (458)
|.|++..-|+.|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888888888765
No 202
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=32.03 E-value=38 Score=29.97 Aligned_cols=39 Identities=18% Similarity=0.124 Sum_probs=24.9
Q ss_pred ccCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 10 QQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 10 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
...++++.++++.++ |-+ -..|+++|.++||+|+.+.-.
T Consensus 7 ~~~~~~~~vlVTGat-G~i--G~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 7 HHHHGSMRALITGVA-GFV--GKYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp ------CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred ccccCcceEEEECCC-ChH--HHHHHHHHHHCCCEEEEEecC
Confidence 344566667777665 544 357889999999999998754
No 203
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=31.97 E-value=17 Score=32.51 Aligned_cols=32 Identities=9% Similarity=0.038 Sum_probs=24.1
Q ss_pred hhcCCCccccccccCchhHHHHHhh----CCccccccc
Q 012678 344 VLAHPAVGGFWTHNGWNSTLESICE----GVPMICQPC 377 (458)
Q Consensus 344 ll~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~ 377 (458)
....+++ +|.-||=||+.+++.. ++|++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3445677 9999999999999754 899998874
No 204
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=31.92 E-value=68 Score=28.98 Aligned_cols=72 Identities=14% Similarity=0.185 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHH
Q 012678 285 NVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLE 364 (458)
Q Consensus 285 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~e 364 (458)
+.+....+.+++.....+.||...++.. .. ++.++++...+-.+|+. ||-+.-...++-
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------~~--------rlL~~lD~~~i~~~PK~--~~GySDiTaL~~ 122 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGMN-----------SN--------SLLPYIDYDAFQNNPKI--MIGYSDATALLL 122 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-----------GG--------GGGGGSCHHHHHHSCCE--EEECGGGHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcccccc-----------HH--------HHhhhcChhHHhhCCeE--EEEechHHHHHH
Confidence 4555777889999888889998877641 11 56677776666667777 887777777777
Q ss_pred HHh--hCCccccccc
Q 012678 365 SIC--EGVPMICQPC 377 (458)
Q Consensus 365 al~--~GvP~l~~P~ 377 (458)
+++ .|++.+-=|.
T Consensus 123 al~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 123 GIYAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHHHCCCEEECCC
T ss_pred HHHHhcCceEEECCh
Confidence 776 4776666665
No 205
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=31.80 E-value=54 Score=27.69 Aligned_cols=33 Identities=21% Similarity=0.167 Sum_probs=23.5
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
||.++++.++ |-+ -..++++|+++||+|+++.-
T Consensus 1 Mk~vlVtGas-g~i--G~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 1 MSVIAITGSA-SGI--GAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp -CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEeCCC-cHH--HHHHHHHHHhCCCEEEEEeC
Confidence 5566676655 433 45678999999999998865
No 206
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=31.79 E-value=32 Score=30.85 Aligned_cols=31 Identities=19% Similarity=0.356 Sum_probs=24.7
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEE
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITII 48 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 48 (458)
..|||+++-.|+.| ..+|..|++.||+|+++
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 46899999777655 56788999999999999
No 207
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=31.78 E-value=50 Score=28.89 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=30.2
Q ss_pred CE-EEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RR-VILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~-il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
|| |.|..-|+-|-..-...||..|+++|++|.++=.+
T Consensus 2 MkvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 2 MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ceEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 55 45555667799999999999999999999998654
No 208
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=31.66 E-value=32 Score=30.85 Aligned_cols=32 Identities=9% Similarity=0.266 Sum_probs=25.9
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
|||+++-.|+.| ..+|..|++.||+|+++...
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 789999666655 45788899999999999764
No 209
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=31.58 E-value=26 Score=31.64 Aligned_cols=32 Identities=19% Similarity=0.149 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|||+++-.|+.| ..+|..|++.||+|+++..
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLAR 34 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECC
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 5899999666655 4678899999999999875
No 210
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=31.55 E-value=20 Score=31.71 Aligned_cols=31 Identities=10% Similarity=-0.039 Sum_probs=25.2
Q ss_pred hcCCCccccccccCchhHHHHHhh----CCccccccc
Q 012678 345 LAHPAVGGFWTHNGWNSTLESICE----GVPMICQPC 377 (458)
Q Consensus 345 l~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~ 377 (458)
-..+++ +|+=||=||+.+++.. ++|++.++.
T Consensus 61 ~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 61 GQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred ccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 345677 9999999999999743 789999874
No 211
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=31.49 E-value=32 Score=31.13 Aligned_cols=38 Identities=8% Similarity=0.107 Sum_probs=27.9
Q ss_pred CCCEEEEEcCCCCcC----HHHHHHHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQGH----INPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.+|||+++..+..+- +.....++++|.+.||+|+.+..
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 368988887543322 22567789999999999998864
No 212
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=31.35 E-value=53 Score=28.37 Aligned_cols=36 Identities=11% Similarity=0.135 Sum_probs=27.4
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+..+|+++++.++.| =-..+|++|+++|++|+++..
T Consensus 23 m~~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp -CCSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 445688899888742 346899999999999987744
No 213
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=31.34 E-value=36 Score=25.04 Aligned_cols=65 Identities=11% Similarity=0.017 Sum_probs=45.9
Q ss_pred hcCCCccccccccCchh---------HHHHHhhCCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHh
Q 012678 345 LAHPAVGGFWTHNGWNS---------TLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVT 415 (458)
Q Consensus 345 l~~~~~~~~I~HgG~~s---------~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll 415 (458)
+..+++ +|--.|..| +..|...|+|++++=-.+.+. .-..+++. |..+- ..+.+.|.++|+..+
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~---a~~iV-~Wn~~~I~~aI~~~~ 108 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV---SSEVV-GWNPHCIRDALEDAL 108 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH---CSEEE-CSCHHHHHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh---Cceec-cCCHHHHHHHHHhcc
Confidence 566788 999999887 667889999999987777542 11224432 32222 378899999999876
Q ss_pred c
Q 012678 416 V 416 (458)
Q Consensus 416 ~ 416 (458)
+
T Consensus 109 ~ 109 (111)
T 1eiw_A 109 D 109 (111)
T ss_dssp C
T ss_pred C
Confidence 4
No 214
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=31.15 E-value=64 Score=27.28 Aligned_cols=38 Identities=16% Similarity=0.072 Sum_probs=28.5
Q ss_pred ccCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 10 QQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 10 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
....+.|.++++.++.| --..+|+.|+++|++|+++..
T Consensus 9 ~~~~~~k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 46 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSG---IGSAIARLLHKLGSKVIISGS 46 (249)
T ss_dssp CCCCTTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred cccCCCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEcC
Confidence 33446678888887743 346789999999999988765
No 215
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=31.09 E-value=35 Score=30.41 Aligned_cols=32 Identities=13% Similarity=0.190 Sum_probs=25.6
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
|||+++-.|+.|- .+|..|++.||+|+++...
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcC
Confidence 7899997777774 4688899999999999764
No 216
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=31.07 E-value=2.3e+02 Score=23.65 Aligned_cols=146 Identities=12% Similarity=0.083 Sum_probs=73.6
Q ss_pred hhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhc-CCcceeeccChh
Q 012678 264 WLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLD-GRGHIVKWAPQQ 342 (458)
Q Consensus 264 ~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~ipq~ 342 (458)
|++- .+++++.|..|..+ ...+..|.+.+..+.++-+. +.+.+..... .++.+...--+.
T Consensus 26 fl~L-~gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~-----------~~~~l~~l~~~~~i~~i~~~~~~ 86 (223)
T 3dfz_A 26 MLDL-KGRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT-----------VSAEINEWEAKGQLRVKRKKVGE 86 (223)
T ss_dssp EECC-TTCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS-----------CCHHHHHHHHTTSCEEECSCCCG
T ss_pred EEEc-CCCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC-----------CCHHHHHHHHcCCcEEEECCCCH
Confidence 4444 35778888777543 44556666678876665432 2233322221 222333222233
Q ss_pred hhhcCCCccccccccCchhHHHHHhh----CCcccccccccchhhHHHH-----HHHHHhcceecCC----cccHHHHHH
Q 012678 343 EVLAHPAVGGFWTHNGWNSTLESICE----GVPMICQPCFGDQLVNARY-----VSHVWRVGLHLER----KFERREIET 409 (458)
Q Consensus 343 ~ll~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~-----v~~~~G~G~~l~~----~~~~~~l~~ 409 (458)
..|..+++ +|.--|--.+.+.++. |+|+-+ .|.+..+.. +.+. ++-+.+.+ ..-+..|++
T Consensus 87 ~dL~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~ 159 (223)
T 3dfz_A 87 EDLLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKE 159 (223)
T ss_dssp GGSSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHH
T ss_pred hHhCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHH
Confidence 45666676 8887776665555443 444322 244443321 2221 33333332 233556777
Q ss_pred HHHHHhccchhHHHHHHHHHHHHHHHH
Q 012678 410 AIRRVTVEAEGQEMRERIMHLKEKLEL 436 (458)
Q Consensus 410 ~i~~ll~~~~~~~~~~~a~~~~~~~~~ 436 (458)
.|.+++-. +...+.+.+.++++++++
T Consensus 160 ~ie~~lp~-~~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 160 DLSSNYDE-SYTQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHHHSCT-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccH-HHHHHHHHHHHHHHHHHH
Confidence 77777643 235677777777777774
No 217
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=31.06 E-value=26 Score=31.35 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=24.8
Q ss_pred cCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCC-EEEEEeC
Q 012678 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGF-SITIIHT 50 (458)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~ 50 (458)
.+..|||.|+-.|..| ..+|+.|+++|| +|+++..
T Consensus 21 ~~~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 21 QSNAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp ----CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred cCCCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 3456899999665544 578999999999 9888754
No 218
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=31.05 E-value=36 Score=27.75 Aligned_cols=50 Identities=6% Similarity=0.154 Sum_probs=31.2
Q ss_pred chhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhccch----hHHHHHHHHHHHHHHH
Q 012678 380 DQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEAE----GQEMRERIMHLKEKLE 435 (458)
Q Consensus 380 DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~~~----~~~~~~~a~~~~~~~~ 435 (458)
+..+.+..-++. |+|+ .+|+|++.++|.+.++..+ .+.|+ +.-.+-..++
T Consensus 100 ~~id~~~Fe~~c-GVGV----~VT~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr 153 (187)
T 3tl4_X 100 EASTKMGMNENS-GVGI----EITEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVK 153 (187)
T ss_dssp GGCCHHHHHHTT-TTTC----CCCHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHH
T ss_pred CCCCHHHHHHHC-CCCe----EeCHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHh
Confidence 444555555664 8888 3688999999999996421 13444 4444444444
No 219
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=30.96 E-value=68 Score=24.52 Aligned_cols=35 Identities=11% Similarity=0.139 Sum_probs=24.8
Q ss_pred EEEE-cCCCCcCHHH--HHHHHHHHHhCCCEEEEEeCC
Q 012678 17 VILF-PLPLQGHINP--MLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 17 il~~-~~~~~GH~~p--~l~La~~L~~rGh~Vt~~~~~ 51 (458)
++|+ +.+-+|+... .+.+|..+...||+|.++-..
T Consensus 8 ~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~ 45 (136)
T 2hy5_B 8 FMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLD 45 (136)
T ss_dssp EEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECG
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEh
Confidence 4444 4444575444 678899999999999998664
No 220
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=30.92 E-value=40 Score=30.50 Aligned_cols=82 Identities=9% Similarity=-0.112 Sum_probs=46.8
Q ss_pred EEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCccc
Q 012678 273 VMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGG 352 (458)
Q Consensus 273 ~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~ 352 (458)
.|+++..+......+.+..+...|++.+..+........ ....+ + -.......+++
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~-----------~~a~~-------~----~~~~~~~~~d~-- 83 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKI-----------GDATL-------E----AERAMHENYDV-- 83 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCST-----------THHHH-------H----HHHHTTTTCSE--
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCc-----------chHHH-------H----HHHHhhcCCCE--
Confidence 455555443322334567788888887765544332211 11100 0 01112233455
Q ss_pred cccccCchhHHHHHh------hCCcccccccc
Q 012678 353 FWTHNGWNSTLESIC------EGVPMICQPCF 378 (458)
Q Consensus 353 ~I~HgG~~s~~eal~------~GvP~l~~P~~ 378 (458)
+|.=||=||+.|++. .++|+.++|..
T Consensus 84 vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 84 LIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEEEcCchHHHHHHHHHHhCCCCCcEEEecCC
Confidence 999999999999853 46899999974
No 221
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=30.87 E-value=59 Score=25.89 Aligned_cols=39 Identities=15% Similarity=0.193 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCCC--c-CHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQ--G-HINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~--G-H~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+-+|+++|.-+. . --.+.-.|++.|.++|.+|.|...|
T Consensus 29 ~A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 29 NSHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp HCSEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECS
T ss_pred hCCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 3568888886643 2 2457889999999999999999887
No 222
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=30.72 E-value=48 Score=28.85 Aligned_cols=35 Identities=14% Similarity=0.094 Sum_probs=25.8
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.+.|+++++.++.| =-..+|++|+++|++|.++.-
T Consensus 22 ~~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 56 (279)
T 3sju_A 22 SRPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCAR 56 (279)
T ss_dssp ---CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 34578899988753 346789999999999987764
No 223
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=30.55 E-value=66 Score=28.15 Aligned_cols=38 Identities=5% Similarity=-0.049 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCC-cCHH---HHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQ-GHIN---PMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~-GH~~---p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+|||+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 478888876542 2222 4568999999999999988764
No 224
>2wam_A RV2714, conserved hypothetical alanine and leucine rich protein; unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=30.48 E-value=3.1e+02 Score=24.84 Aligned_cols=147 Identities=10% Similarity=0.024 Sum_probs=73.6
Q ss_pred CCcEEEEEcCccccCCH-HHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCC
Q 012678 270 AKSVMYVSFGSIVVVNV-TEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHP 348 (458)
Q Consensus 270 ~~~~i~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~ 348 (458)
+++++++ .|-.....- .+...+++-+++.+.+-|..+++-.... ...-|- .+.......+++...
T Consensus 141 g~~~LlL-~G~eP~~~w~~fa~~vl~~a~~~gV~~vvtLgglp~~v---phtRp~----------~V~~~at~~el~~~~ 206 (351)
T 2wam_A 141 GTPFLLL-AGLEPDLKWERFITAVRLLAERLGVRQTIGLGTVPMAV---PHTRPI----------TMTAHSNNRELISDF 206 (351)
T ss_dssp CCEEEEE-EEECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEEEESC---CTTSCC----------CEEEEESSGGGGTTS
T ss_pred CCcEEEE-ECCCChhHHHHHHHHHHHHHHHhCCCEEEEEecccCCC---CCccCc----------ceEEEECCHHHHHhc
Confidence 3445444 466555443 4455578888889998888776532110 000010 112112223333222
Q ss_pred Cc--cccccccCchhHH--HHHhhCCccccc----ccccch---hhHHHHHHHHH--hcceecCC---cccHHHHHHHHH
Q 012678 349 AV--GGFWTHNGWNSTL--ESICEGVPMICQ----PCFGDQ---LVNARYVSHVW--RVGLHLER---KFERREIETAIR 412 (458)
Q Consensus 349 ~~--~~~I~HgG~~s~~--eal~~GvP~l~~----P~~~DQ---~~na~~v~~~~--G~G~~l~~---~~~~~~l~~~i~ 412 (458)
.+ .-+-.-+|..++. +|-..|+|.+++ |...=| +.-|..+-+.+ =+|+.++. .-.++++.+.|+
T Consensus 207 ~~~~~~~~gp~GisglL~~~~~~~Gi~a~~l~~~vP~Yla~~pdP~AA~alL~~L~~llgl~ip~~~L~e~Ae~ie~~i~ 286 (351)
T 2wam_A 207 QPSISEIQVPGSASNLLEYRMAQHGHEVVGFTVHVPHYLTQTDYPAAAQALLEQVAKTGSLQLPLAVLAEAAAEVQAKID 286 (351)
T ss_dssp CCCCCSEEEECCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHH
T ss_pred CCccCcccccccHHHHHHHHHHHcCCCEEEEEEeCCccccCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Confidence 21 0022234554444 567789999987 543222 33333322112 23666665 456788999999
Q ss_pred HHhccchhHHHHHHHHHHHH
Q 012678 413 RVTVEAEGQEMRERIMHLKE 432 (458)
Q Consensus 413 ~ll~~~~~~~~~~~a~~~~~ 432 (458)
++.++. +.+.+-++.+-+
T Consensus 287 el~~~~--~e~~~~V~~LE~ 304 (351)
T 2wam_A 287 EQVQAS--AEVAQVVAALER 304 (351)
T ss_dssp HHHTTC--HHHHHHHHHHHH
T ss_pred HHHHhC--HHHHHHHHHHHh
Confidence 999753 444443334333
No 225
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=30.38 E-value=31 Score=30.55 Aligned_cols=31 Identities=16% Similarity=0.354 Sum_probs=24.2
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+||.|+=.|..|+ .+|..|+++||+|+++..
T Consensus 16 ~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 16 KHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHHH-----HHHHHHHhCCCeEEEEEC
Confidence 5788887666554 578899999999988754
No 226
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=30.28 E-value=1.5e+02 Score=25.14 Aligned_cols=35 Identities=11% Similarity=0.068 Sum_probs=29.2
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+.|++++|.++.| =-..+|+.|++.|.+|.++.-.
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~Vv~~~~~ 44 (242)
T 4b79_A 10 AGQQVLVTGGSSG---IGAAIAMQFAELGAEVVALGLD 44 (242)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 5799999999875 3578899999999999887653
No 227
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=30.26 E-value=38 Score=29.06 Aligned_cols=39 Identities=18% Similarity=0.199 Sum_probs=30.7
Q ss_pred CCCEEEEEc--CCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFP--LPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
++|+++.+. -++-|-..-...||..|+++|++|.++-.+
T Consensus 4 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 44 (257)
T 1wcv_1 4 AKVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLD 44 (257)
T ss_dssp -CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 456766665 446688889999999999999999998664
No 228
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=30.25 E-value=68 Score=27.57 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=26.5
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|.++.-
T Consensus 9 ~~k~~lVTGas~g---IG~aia~~l~~~G~~V~~~~r 42 (267)
T 3t4x_A 9 KGKTALVTGSTAG---IGKAIATSLVAEGANVLINGR 42 (267)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578888887743 246789999999999988754
No 229
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=30.09 E-value=41 Score=28.98 Aligned_cols=35 Identities=23% Similarity=0.122 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+.|+++++.++.| =-..+|++|+++|++|+++.-.
T Consensus 26 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 26 SSAPILITGASQR---VGLHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp -CCCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 4467888887743 3468899999999999888653
No 230
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=30.06 E-value=33 Score=25.71 Aligned_cols=41 Identities=22% Similarity=0.161 Sum_probs=25.5
Q ss_pred HHHHHHHHhhCCCCCCCeeEEEecCchh--hHHHHHH---HcCCCeEEEec
Q 012678 97 FQDCLAKLISNGDQEEPVTCLITDAIWH--FAQTVAD---TLRLPRIVLRT 142 (458)
Q Consensus 97 l~~~l~~l~~~~~~~~~pDlvI~D~~~~--~~~~~A~---~lgiP~v~~~~ 142 (458)
-.+.++.+.. .+||+||.|...+ -|..+++ ..++|.|.++.
T Consensus 42 g~eAl~~~~~-----~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa 87 (123)
T 2lpm_A 42 MQEALDIARK-----GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATG 87 (123)
T ss_dssp HHHHHHHHHH-----CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCT
T ss_pred HHHHHHHHHh-----CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEec
Confidence 3445666655 6899999998652 2344443 34788776543
No 231
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=30.03 E-value=61 Score=28.01 Aligned_cols=34 Identities=12% Similarity=0.104 Sum_probs=28.3
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-.++|+.|+++|++|.+..-
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 10 RGKRALITAGTKG---AGAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp TTCEEEESCCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeccCcH---HHHHHHHHHHHcCCEEEEEEC
Confidence 6699999998865 346889999999999988765
No 232
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=30.01 E-value=62 Score=28.40 Aligned_cols=39 Identities=21% Similarity=0.313 Sum_probs=29.3
Q ss_pred CCCCEEEEEcCCCCcCHHHH--HHHHHHHHhCC-CEEEEEeCC
Q 012678 12 KKGRRVILFPLPLQGHINPM--LQLASILYSKG-FSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~--l~La~~L~~rG-h~Vt~~~~~ 51 (458)
.++.|||++.... +|-.+. ..|++.|.+.| ++|++...+
T Consensus 2 ~~~~kvLiv~G~~-~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLITGQN-NHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEESCC-SSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEcCCC-CCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 3578999994444 886443 57888888888 999999764
No 233
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=30.01 E-value=38 Score=28.08 Aligned_cols=33 Identities=15% Similarity=0.234 Sum_probs=24.3
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
..|||.++-.+..| ..+|+.|+++||+|+++..
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 46789988655444 5678899999999998854
No 234
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=29.91 E-value=64 Score=28.86 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=25.1
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
++|||+|+-.+. ......++|.+.||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~-----fa~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPD-----FAARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSH-----HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEeC
Confidence 469999998764 2345557777889999877664
No 235
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=29.77 E-value=29 Score=30.81 Aligned_cols=33 Identities=18% Similarity=0.034 Sum_probs=25.1
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
..|||.|+=.|..| ..+|+.|+++||+|+++..
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 45899999555444 4688999999999998844
No 236
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=29.71 E-value=37 Score=30.34 Aligned_cols=24 Identities=8% Similarity=0.134 Sum_probs=20.4
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCCC
Q 012678 30 PMLQLASILYSKGFSITIIHTNFN 53 (458)
Q Consensus 30 p~l~La~~L~~rGh~Vt~~~~~~~ 53 (458)
.-..+|+++.++|++|++++.+..
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHHCCCEEEEEecCCC
Confidence 456789999999999999998644
No 237
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=29.70 E-value=67 Score=26.45 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=23.2
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
|||++. |+.|-+ -..++++|.++||+|+.++-.
T Consensus 1 M~ilIt--GatG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIV--GSTGRV--GKSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEE--CCCCHH--HHHHHHHHHHCCCEEEEEECC
Confidence 565544 233433 368899999999999998764
No 238
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=29.55 E-value=67 Score=27.28 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|.++++.++. -+ -..+|++|+++|++|+++.-
T Consensus 18 ~~k~vlVTGas~-gI--G~~~a~~l~~~G~~V~~~~r 51 (249)
T 1o5i_A 18 RDKGVLVLAASR-GI--GRAVADVLSQEGAEVTICAR 51 (249)
T ss_dssp TTCEEEEESCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEcC
Confidence 567788887763 22 45789999999999988765
No 239
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=29.38 E-value=83 Score=27.16 Aligned_cols=34 Identities=18% Similarity=0.100 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|+.|+++|++|+++..
T Consensus 27 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 60 (270)
T 3ftp_A 27 DKQVAIVTGASRG---IGRAIALELARRGAMVIGTAT 60 (270)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4588999888742 346789999999999988764
No 240
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=29.09 E-value=44 Score=29.72 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=25.6
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.+.|||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 19 ~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 19 SHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred ccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 334799998555433 6789999999999998744
No 241
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=29.02 E-value=67 Score=27.80 Aligned_cols=34 Identities=12% Similarity=0.029 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|.++.-
T Consensus 29 ~~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 29 EGASAIVSGGAGG---LGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp TTEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 4588999988754 346799999999999888754
No 242
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=28.96 E-value=70 Score=27.38 Aligned_cols=36 Identities=11% Similarity=0.061 Sum_probs=27.0
Q ss_pred CCEEEEEcCCCC-cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQ-GHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+.|+++++.++. |-+ -..+|++|+++|++|.++...
T Consensus 19 ~~k~vlITGas~~~gi--G~~~a~~l~~~G~~v~~~~~~ 55 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGM--GIEAARGCAEMGAAVAITYAS 55 (267)
T ss_dssp TTCEEEETTCCSSSSH--HHHHHHHHHHTSCEEEECBSS
T ss_pred CCCEEEEECCCCCCCh--HHHHHHHHHHCCCeEEEEeCC
Confidence 457888888762 333 468899999999999887653
No 243
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=28.95 E-value=53 Score=28.00 Aligned_cols=37 Identities=8% Similarity=0.085 Sum_probs=25.3
Q ss_pred HHHHHhhCCCCCCCeeEEEecCchh--hHHHHHHHcCCCeEEEe
Q 012678 100 CLAKLISNGDQEEPVTCLITDAIWH--FAQTVADTLRLPRIVLR 141 (458)
Q Consensus 100 ~l~~l~~~~~~~~~pDlvI~D~~~~--~~~~~A~~lgiP~v~~~ 141 (458)
-++++++ .+||+||...... ....--+..|+|++.+.
T Consensus 51 n~E~i~~-----l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 51 NAEGILA-----MKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CHHHHHT-----TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHc-----cCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 3566665 6899999876542 23344466799999875
No 244
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=28.92 E-value=52 Score=28.39 Aligned_cols=34 Identities=9% Similarity=0.181 Sum_probs=26.6
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
..|+++++.++.| =-..+|++|+++|++|.++.-
T Consensus 15 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 48 (266)
T 3p19_A 15 MKKLVVITGASSG---IGEAIARRFSEEGHPLLLLAR 48 (266)
T ss_dssp CCCEEEEESTTSH---HHHHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 3478888888743 345789999999999998865
No 245
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=28.87 E-value=1.7e+02 Score=21.41 Aligned_cols=47 Identities=15% Similarity=0.164 Sum_probs=32.3
Q ss_pred CCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhcc
Q 012678 369 GVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 417 (458)
Q Consensus 369 GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 417 (458)
.+|+|++--..+.. ......+ .|+--.+.+.++.++|.++|++++..
T Consensus 78 ~~pii~~t~~~~~~-~~~~~~~-~ga~~~l~KP~~~~~L~~~i~~~l~~ 124 (136)
T 3t6k_A 78 TLPILMLTAQGDIS-AKIAGFE-AGANDYLAKPFEPQELVYRVKNILAR 124 (136)
T ss_dssp TCCEEEEECTTCHH-HHHHHHH-HTCSEEEETTCCHHHHHHHHHHHHHC
T ss_pred CccEEEEecCCCHH-HHHHHHh-cCcceEEeCCCCHHHHHHHHHHHHhc
Confidence 67887775544433 3334444 37765666668999999999999976
No 246
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=28.82 E-value=89 Score=25.47 Aligned_cols=37 Identities=22% Similarity=0.405 Sum_probs=27.6
Q ss_pred CEE-EEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRV-ILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~i-l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.|| +|+..+...+-.....+++.|++.|+.|.+++..
T Consensus 107 ~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G 144 (192)
T 2x5n_A 107 QRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIG 144 (192)
T ss_dssp EEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEES
T ss_pred ceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeC
Confidence 354 4555555566777889999999999999998654
No 247
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=28.80 E-value=65 Score=27.01 Aligned_cols=34 Identities=6% Similarity=0.033 Sum_probs=25.4
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.|.++++.++.| --..+|+.|+++|++|+++.-.
T Consensus 3 ~k~vlITGas~g---IG~~~a~~l~~~G~~V~~~~r~ 36 (236)
T 1ooe_A 3 SGKVIVYGGKGA---LGSAILEFFKKNGYTVLNIDLS 36 (236)
T ss_dssp CEEEEEETTTSH---HHHHHHHHHHHTTEEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEecC
Confidence 367777776642 3468999999999999887653
No 248
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=28.78 E-value=1.3e+02 Score=24.30 Aligned_cols=41 Identities=7% Similarity=0.036 Sum_probs=30.9
Q ss_pred cCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 012678 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNF 52 (458)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (458)
+...+||+++..++.. ..-+....+.|.+.|++|+++++..
T Consensus 20 ~~~~~kV~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 20 AGLSKKIAVLITDEFE-DSEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp TTCCCEEEEECCTTBC-THHHHHHHHHHHHTTCEEEEEESST
T ss_pred hccCCEEEEEECCCCC-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3445789999988754 3445667778888999999999853
No 249
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=28.64 E-value=1.2e+02 Score=21.27 Aligned_cols=34 Identities=9% Similarity=0.037 Sum_probs=25.6
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.-+|++++..+ ......++.|.+.||+|..+..
T Consensus 55 ~~~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 55 DNETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp TTSEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 345799998554 4567889999999998887644
No 250
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=28.42 E-value=98 Score=24.83 Aligned_cols=33 Identities=15% Similarity=0.405 Sum_probs=23.6
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
|+|++. |+.|-+ -..|+++|.++||+|+.++-.
T Consensus 4 ~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 666554 333433 467889999999999998764
No 251
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=28.27 E-value=57 Score=27.10 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=24.9
Q ss_pred CCeeEEE-ecCch-hhHHHHHHHcCCCeEEEecc
Q 012678 112 EPVTCLI-TDAIW-HFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 112 ~~pDlvI-~D~~~-~~~~~~A~~lgiP~v~~~~~ 143 (458)
..||+|| .|+.. .-+..=|.++|||.|.+.-+
T Consensus 114 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDT 147 (208)
T 1vi6_A 114 REPEVVFVNDPAIDKQAVSEATAVGIPVVALCDS 147 (208)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCCEEEEECCCcchhHHHHHHHhCCCEEEEeCC
Confidence 3588876 66644 66788899999999998766
No 252
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=28.17 E-value=72 Score=24.59 Aligned_cols=34 Identities=18% Similarity=0.189 Sum_probs=27.2
Q ss_pred EEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 18 ILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 18 l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+++..+..-.+.+.+.+|...++.|++|+++.+.
T Consensus 12 II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~ 45 (144)
T 2qs7_A 12 IIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTF 45 (144)
T ss_dssp EEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEeh
Confidence 3344445678889999999999999999999874
No 253
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=28.14 E-value=72 Score=24.00 Aligned_cols=33 Identities=15% Similarity=0.189 Sum_probs=23.7
Q ss_pred CCEEEEEcCCCCcCHH--------HHHHHHHHHHhCCCEEE
Q 012678 14 GRRVILFPLPLQGHIN--------PMLQLASILYSKGFSIT 46 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~--------p~l~La~~L~~rGh~Vt 46 (458)
-||.++++.|-.|... -+-..|..|.++||.+.
T Consensus 7 ~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 7 HMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 3678899988777732 34566777889999654
No 254
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=28.13 E-value=32 Score=30.44 Aligned_cols=32 Identities=13% Similarity=0.035 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+|||.|+=.+..| ..+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG-----~~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMG-----APMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 5799999776666 4689999999999998854
No 255
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=28.00 E-value=89 Score=26.04 Aligned_cols=35 Identities=29% Similarity=0.356 Sum_probs=23.6
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+.|+|++. .+ .|.+ -..|+++|+++||+|+.++-.
T Consensus 20 ~~~~ilVt-Ga-tG~i--G~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVV-GA-NGKV--ARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEE-TT-TSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCeEEEE-CC-CChH--HHHHHHHHHhCCCeEEEEECC
Confidence 35666544 33 3444 357889999999999998753
No 256
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=27.95 E-value=42 Score=29.93 Aligned_cols=34 Identities=15% Similarity=0.139 Sum_probs=27.5
Q ss_pred CEEEEEcCCCC--cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQ--GHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~--GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+|++++.++- |+ -+.+|+.|+++|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEec
Confidence 48999998764 33 478999999999999998653
No 257
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=27.87 E-value=33 Score=31.39 Aligned_cols=39 Identities=5% Similarity=0.011 Sum_probs=28.2
Q ss_pred CCCEEEEEcCCCCcCH----HHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHI----NPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~----~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+|||+++..+..+-. .....++++|.++||+|+.+...
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 3689988886543322 34578899999999999988653
No 258
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=27.84 E-value=76 Score=27.14 Aligned_cols=34 Identities=18% Similarity=0.113 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| --..+|++|+++|++|.++.-
T Consensus 28 ~~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (262)
T 3rkr_A 28 SGQVAVVTGASRG---IGAAIARKLGSLGARVVLTAR 61 (262)
T ss_dssp TTCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEEC
Confidence 3478888887743 346789999999999888754
No 259
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=27.82 E-value=63 Score=28.20 Aligned_cols=34 Identities=18% Similarity=0.071 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|.++.-
T Consensus 27 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 60 (283)
T 3v8b_A 27 PSPVALITGAGSG---IGRATALALAADGVTVGALGR 60 (283)
T ss_dssp CCCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578889888753 346889999999999988764
No 260
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=27.80 E-value=53 Score=28.42 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=23.9
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
|||++.- + |.+- ..|+++|.++||+|+.++-.
T Consensus 6 ~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 6 GTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESC
T ss_pred CcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcC
Confidence 5766663 5 6554 46789999999999998763
No 261
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=27.75 E-value=1e+02 Score=27.55 Aligned_cols=34 Identities=15% Similarity=0.228 Sum_probs=25.8
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+.|||+|+-.+..+ +...+.|.++||+|..+.+.
T Consensus 3 ~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~ 36 (317)
T 3rfo_A 3 AMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQ 36 (317)
T ss_dssp TTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECC
T ss_pred CceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 44899999777543 45567888889999988774
No 262
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=27.74 E-value=69 Score=27.36 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=26.1
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|+++++.++.| =-..+|++|+++|++|+++.-
T Consensus 6 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 38 (257)
T 3imf_A 6 EKVVIITGGSSG---MGKGMATRFAKEGARVVITGR 38 (257)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 478888887753 346889999999999988764
No 263
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=27.71 E-value=89 Score=27.68 Aligned_cols=37 Identities=8% Similarity=-0.065 Sum_probs=29.3
Q ss_pred CCEEEEEcCCCCc-C---HHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQG-H---INPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~G-H---~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
++||+++..+-.+ | +.....++++|.++||+|+.+.+
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~ 53 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDP 53 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeC
Confidence 5788888876433 2 45788999999999999999874
No 264
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=27.68 E-value=28 Score=30.85 Aligned_cols=39 Identities=15% Similarity=0.094 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCCCc----CHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQG----HINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~G----H~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+|||+++..+-.. -+.....++++|.++||+|..+...
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLN 44 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECS
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 47899999866321 2455778999999999999988764
No 265
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=27.65 E-value=62 Score=26.27 Aligned_cols=37 Identities=11% Similarity=0.152 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCCcCHHHHHH-HHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQ-LASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~-La~~L~~rGh~Vt~~~~~ 51 (458)
.|||+++... .|+..-+.. +++.|.+.|++|.++--.
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 3788888888 887665443 455566679999888553
No 266
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=27.59 E-value=44 Score=28.78 Aligned_cols=38 Identities=16% Similarity=0.049 Sum_probs=29.6
Q ss_pred CCEEEEEc--CCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFP--LPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.++++.++ -++-|=..-...||..|+++|++|.++-.+
T Consensus 17 ~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D 56 (262)
T 2ph1_A 17 IKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDAD 56 (262)
T ss_dssp CSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34555444 446688999999999999999999998665
No 267
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=27.57 E-value=63 Score=28.50 Aligned_cols=40 Identities=13% Similarity=0.114 Sum_probs=30.6
Q ss_pred CCCCE-EEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 12 KKGRR-VILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 12 ~~~~~-il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.++++ |+|..-|+-|=..-...||..|+++|+.|.++-.+
T Consensus 38 ~~~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 38 ITGAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp --CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred cCCceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34555 45555556788999999999999999999998664
No 268
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=27.52 E-value=1.1e+02 Score=22.94 Aligned_cols=48 Identities=13% Similarity=-0.026 Sum_probs=30.3
Q ss_pred hCCcccccccccchhhHHHHHHHHHh-cceecCCcccHHHHHHHHHHHhcc
Q 012678 368 EGVPMICQPCFGDQLVNARYVSHVWR-VGLHLERKFERREIETAIRRVTVE 417 (458)
Q Consensus 368 ~GvP~l~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~l~~~i~~ll~~ 417 (458)
..+|+|++--..|.... ....+ .| +--.+.+.++.++|.++|+++++.
T Consensus 75 ~~~~ii~~s~~~~~~~~-~~~~~-~g~~~~~l~KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTTA-MEAVN-EGQVFRFLNKPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp SSCEEEEEECGGGHHHH-HHHHH-HTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHHH-HHHHH-cCCeeEEEcCCCCHHHHHHHHHHHHHH
Confidence 46677766544443333 33333 26 533444458999999999999976
No 269
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=27.49 E-value=48 Score=27.91 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=31.3
Q ss_pred CCCEEEEEc--CCCCcCHHHHHHHHHHHHhC-CCEEEEEeCCC
Q 012678 13 KGRRVILFP--LPLQGHINPMLQLASILYSK-GFSITIIHTNF 52 (458)
Q Consensus 13 ~~~~il~~~--~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~ 52 (458)
++||++.+. -++-|-..-...||..|+++ |+.|.++-.+.
T Consensus 2 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~ 44 (245)
T 3ea0_A 2 NAKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISL 44 (245)
T ss_dssp -CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCT
T ss_pred CCCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 346655554 45779999999999999999 99999997653
No 270
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=27.42 E-value=58 Score=27.97 Aligned_cols=35 Identities=11% Similarity=0.173 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+.|+++++.++. -+ -..+|++|+++|++|+++.-.
T Consensus 27 ~~k~vlVTGas~-gI--G~aia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 27 QQKVVVITGASQ-GI--GAGLVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp TCCEEEESSCSS-HH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCC-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 457888888763 22 358899999999999988653
No 271
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=27.40 E-value=1.4e+02 Score=26.82 Aligned_cols=79 Identities=9% Similarity=0.050 Sum_probs=47.3
Q ss_pred CCcEEEEEcCcccc-CCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCC
Q 012678 270 AKSVMYVSFGSIVV-VNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHP 348 (458)
Q Consensus 270 ~~~~i~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~ 348 (458)
+..+-+|+..+-.. ...+.++..++-|++.|.+++. +...... ...+...-.+|.. ..++.+..+
T Consensus 12 GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~--~~~~~~~---~~~~agtd~~Ra~---------dL~~a~~Dp 77 (327)
T 4h1h_A 12 GDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTF--GEHVAEM---DCMMSSSIRSRVA---------DIHEAFNDS 77 (327)
T ss_dssp TCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEE--CTTTTCC---CTTSSCCHHHHHH---------HHHHHHHCT
T ss_pred CCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEE--Ccchhhc---cCcccCCHHHHHH---------HHHHHhhCC
Confidence 56788888876543 4566677788888888887544 3322111 1112222222211 235678889
Q ss_pred Ccccccc-ccCchhH
Q 012678 349 AVGGFWT-HNGWNST 362 (458)
Q Consensus 349 ~~~~~I~-HgG~~s~ 362 (458)
++++++| .||+|+.
T Consensus 78 ~i~aI~~~rGG~g~~ 92 (327)
T 4h1h_A 78 SVKAILTVIGGFNSN 92 (327)
T ss_dssp TEEEEEESCCCSCGG
T ss_pred CCCEEEEcCCchhHH
Confidence 9888886 5888765
No 272
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=27.38 E-value=45 Score=28.90 Aligned_cols=33 Identities=12% Similarity=0.105 Sum_probs=27.0
Q ss_pred CEEEEEcCCCC--cCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQ--GHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~--GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
-+|++++.++- |+ -+.+|+.|+++|++|+++..
T Consensus 86 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 120 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLP 120 (259)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEe
Confidence 48999998764 33 47899999999999999865
No 273
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=27.33 E-value=45 Score=30.23 Aligned_cols=37 Identities=19% Similarity=0.218 Sum_probs=24.6
Q ss_pred HHHHhhCCCCCCCeeEEEecCchh-hHHHHHHHcCCCeEEEec
Q 012678 101 LAKLISNGDQEEPVTCLITDAIWH-FAQTVADTLRLPRIVLRT 142 (458)
Q Consensus 101 l~~l~~~~~~~~~pDlvI~D~~~~-~~~~~A~~lgiP~v~~~~ 142 (458)
++++++ .+||+||...... ......+.+|||++.+..
T Consensus 89 ~E~Ila-----l~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 89 LESLIT-----LQPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp HHHHHH-----HCCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred HHHHhc-----CCCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 455555 5799999865432 223455778999998754
No 274
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=27.32 E-value=67 Score=27.81 Aligned_cols=35 Identities=14% Similarity=0.272 Sum_probs=26.3
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
-..|+++++.++.| =-..+|++|+++|++|+++.-
T Consensus 26 ~~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 60 (272)
T 4dyv_A 26 TGKKIAIVTGAGSG---VGRAVAVALAGAGYGVALAGR 60 (272)
T ss_dssp --CCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 35588999988742 346889999999999988764
No 275
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=27.31 E-value=80 Score=25.92 Aligned_cols=36 Identities=11% Similarity=0.138 Sum_probs=29.1
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
..++++..+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 456777777778888899999999999998877654
No 276
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=27.18 E-value=65 Score=27.08 Aligned_cols=33 Identities=15% Similarity=0.110 Sum_probs=25.5
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+|+++++.++.| =-..+|++|+++|++|.++.-
T Consensus 3 ~k~vlVTGas~G---IG~a~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 3 LGHIIVTGAGSG---LGRALTIGLVERGHQVSMMGR 35 (235)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 467888877743 346889999999999988764
No 277
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=27.16 E-value=65 Score=28.23 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=26.9
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+.|+++++.++.| =-..+|++|+++|++|+++.-.
T Consensus 10 ~~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 10 TKRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp --CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 34578889888743 3457899999999999888653
No 278
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=27.03 E-value=65 Score=31.09 Aligned_cols=38 Identities=13% Similarity=0.265 Sum_probs=32.0
Q ss_pred CCEEEEEcCC---CCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLP---LQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~---~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+||.+|++.+ +.|-=.-.-.|+..|..||+.||.+--+
T Consensus 2 ~~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~d 42 (535)
T 3nva_A 2 PNKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKID 42 (535)
T ss_dssp CCEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecC
Confidence 4699999987 4466788899999999999999998654
No 279
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=26.99 E-value=40 Score=28.95 Aligned_cols=33 Identities=21% Similarity=0.237 Sum_probs=27.1
Q ss_pred CEEEEEcCCCC--cCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQ--GHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~--GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.+|++++.++- |+ -+.+|+.|+++|++|+++..
T Consensus 59 ~~v~VlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 93 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGD---GLVCARHLKLFGYNPVVFYP 93 (246)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCCEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEc
Confidence 48999998764 33 47899999999999999865
No 280
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=26.94 E-value=83 Score=27.62 Aligned_cols=35 Identities=14% Similarity=0.215 Sum_probs=27.4
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+.|+++++.++.| =-..+|+.|+++|++|+++.-.
T Consensus 40 ~~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~ 74 (293)
T 3rih_A 40 SARSVLVTGGTKG---IGRGIATVFARAGANVAVAARS 74 (293)
T ss_dssp TTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEECC
Confidence 4578899988743 3467899999999999888653
No 281
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=26.78 E-value=82 Score=24.67 Aligned_cols=36 Identities=14% Similarity=0.179 Sum_probs=26.8
Q ss_pred CEEEEEcCCCCcCHHHHH-HHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPML-QLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~ 50 (458)
|||+++-+..+|+..-+. .|++.|.+.|++|.++-.
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~ 37 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDL 37 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 677777777778887654 478888888999887754
No 282
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=26.74 E-value=35 Score=30.63 Aligned_cols=31 Identities=23% Similarity=0.170 Sum_probs=23.8
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
|||.|+-.|..| ..+|..|+++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 688888655544 4568899999999999865
No 283
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=26.65 E-value=60 Score=29.99 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=25.7
Q ss_pred ccccccCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 6 ESNVQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 6 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.......++++|+++=.+- --+.+|..|+++|++|+++=.
T Consensus 15 ~~~~~~~~~~dV~IVGaG~-----aGl~~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 15 GENLYFQGHMKAIVIGAGI-----GGLSAAVALKQSGIDCDVYEA 54 (407)
T ss_dssp --------CCEEEEECCSH-----HHHHHHHHHHHTTCEEEEEES
T ss_pred CCcccCCCCCEEEEECCCH-----HHHHHHHHHHhCCCCEEEEeC
Confidence 3344556678998885553 358889999999999999954
No 284
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=26.64 E-value=86 Score=26.49 Aligned_cols=34 Identities=21% Similarity=0.113 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|.++..
T Consensus 6 ~~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~ 39 (255)
T 3icc_A 6 KGKVALVTGASRG---IGRAIAKRLANDGALVAIHYG 39 (255)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeC
Confidence 4578889888754 356899999999999988654
No 285
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=26.61 E-value=76 Score=28.25 Aligned_cols=34 Identities=3% Similarity=0.045 Sum_probs=25.1
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhC-C-CEEEEEeCC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSK-G-FSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r-G-h~Vt~~~~~ 51 (458)
+.+|||+++..+.. .++++.|++. | ++|.++...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 45689999865554 4789999886 7 888777553
No 286
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=26.60 E-value=1.2e+02 Score=25.84 Aligned_cols=35 Identities=9% Similarity=0.004 Sum_probs=26.6
Q ss_pred EEEEEcC-----CCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 16 RVILFPL-----PLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 16 ~il~~~~-----~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
||+|+.. ++ --..=+....+.|.+.|++|+++++.
T Consensus 25 kV~ill~~~~~~dG-~e~~E~~~p~~vL~~aG~~V~~~S~~ 64 (242)
T 3l3b_A 25 NSAVILAGCGHMDG-SEIREAVLVMLELDRHNVNFKCFAPN 64 (242)
T ss_dssp EEEEECCCSSTTTS-CCHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred EEEEEEecCCCCCC-eeHHHHHHHHHHHHHCCCEEEEEecC
Confidence 7888876 44 34444666678888899999999985
No 287
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=26.57 E-value=50 Score=27.35 Aligned_cols=33 Identities=18% Similarity=0.435 Sum_probs=22.9
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
|+|++. . +.|.+- ..|+++|.++||+|+.++-.
T Consensus 5 ~~ilIt-G-atG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLI-G-ASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEEE-T-CCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CEEEEE-c-CCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 455544 3 335443 57899999999999998764
No 288
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=26.54 E-value=66 Score=24.42 Aligned_cols=47 Identities=6% Similarity=0.096 Sum_probs=33.7
Q ss_pred hCCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhc
Q 012678 368 EGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTV 416 (458)
Q Consensus 368 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~ 416 (458)
..+|+|++--..+.. ...+..+ .|+--.+.+.+++++|.++|+++++
T Consensus 86 ~~ipvI~lTa~~~~~-~~~~~~~-~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAKRE-QIIEAAQ-AGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCCHH-HHHHHHH-TTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCCHH-HHHHHHH-CCCCEEEECCCCHHHHHHHHHHHHh
Confidence 467888876555444 4444555 4876666667999999999999885
No 289
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=26.53 E-value=62 Score=30.48 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=23.8
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
|||.++-.|..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 688888555444 5688899999999988754
No 290
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=26.52 E-value=93 Score=26.48 Aligned_cols=38 Identities=8% Similarity=-0.006 Sum_probs=24.8
Q ss_pred HHHHhhCCCCCCCeeEEEecCch-hhHHHHHHHcCCCeEEEecc
Q 012678 101 LAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 101 l~~l~~~~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 143 (458)
++++.+ .+||+||..... ......-+..|||++.+...
T Consensus 53 ~E~i~~-----l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~ 91 (260)
T 2q8p_A 53 VEAVKK-----LKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFD 91 (260)
T ss_dssp HHHHHH-----TCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCS
T ss_pred HHHHHh-----cCCCEEEecCccCHHHHHHHHHcCCcEEEecCC
Confidence 455555 579999986533 22334456679999987543
No 291
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=26.43 E-value=84 Score=26.96 Aligned_cols=34 Identities=12% Similarity=0.114 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|+.|+++|++|+++.-
T Consensus 19 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 19 DGKRALITGATKG---IGADIARAFAAAGARLVLSGR 52 (266)
T ss_dssp TTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578888888753 346789999999999888765
No 292
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=26.34 E-value=82 Score=27.34 Aligned_cols=34 Identities=29% Similarity=0.335 Sum_probs=27.0
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|+.|+++|++|.++..
T Consensus 28 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 28 ARPVAIVTGGRRG---IGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 4578899888743 346889999999999988864
No 293
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=26.31 E-value=49 Score=27.20 Aligned_cols=32 Identities=28% Similarity=0.267 Sum_probs=22.6
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
|||+++- +.|.+- ..+++.|.++||+|+++..
T Consensus 1 m~i~iiG--a~G~~G--~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLG--GTGNLG--KGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEc--CCCHHH--HHHHHHHHHCCCEEEEEeC
Confidence 6777773 234433 4678999999999988754
No 294
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=26.28 E-value=74 Score=24.28 Aligned_cols=37 Identities=14% Similarity=0.358 Sum_probs=25.9
Q ss_pred CEEEEEcCCCCcCHHHH-HHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPM-LQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~-l~La~~L~~rGh~Vt~~~~~ 51 (458)
|||+++-....|+..-+ -.|++.|.++|++|.++...
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 46666666667876543 44677787889999988654
No 295
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=26.26 E-value=48 Score=29.13 Aligned_cols=41 Identities=15% Similarity=0.246 Sum_probs=32.3
Q ss_pred CCCCEEEEEcC--CCCcCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 012678 12 KKGRRVILFPL--PLQGHINPMLQLASILYSKGFSITIIHTNF 52 (458)
Q Consensus 12 ~~~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (458)
..+.|+++++. ++-|--.-...||..|+++|..|.++-.+.
T Consensus 89 ~~~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 131 (286)
T 3la6_A 89 QAQNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDM 131 (286)
T ss_dssp TTTCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred CCCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccC
Confidence 34556666654 466889999999999999999999997653
No 296
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=26.24 E-value=74 Score=27.50 Aligned_cols=34 Identities=12% Similarity=-0.005 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.+|+++++.++ |-+ -..+|++|+++|++|+.+..
T Consensus 4 ~~k~vlVTGas-~gI--G~~~a~~l~~~G~~V~~~~r 37 (281)
T 3m1a_A 4 SAKVWLVTGAS-SGF--GRAIAEAAVAAGDTVIGTAR 37 (281)
T ss_dssp CCCEEEETTTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEeC
Confidence 45788888877 333 45789999999999988765
No 297
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=26.18 E-value=3.7e+02 Score=25.28 Aligned_cols=26 Identities=23% Similarity=0.363 Sum_probs=21.4
Q ss_pred CCeeEEEecCchhhHHHHHHHcCCCeEEE
Q 012678 112 EPVTCLITDAIWHFAQTVADTLRLPRIVL 140 (458)
Q Consensus 112 ~~pDlvI~D~~~~~~~~~A~~lgiP~v~~ 140 (458)
.+||++|.+.. ...+|+++|||++.+
T Consensus 384 ~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 384 EGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp SCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred cCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 57999998853 467889999999974
No 298
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=26.10 E-value=3.3e+02 Score=23.78 Aligned_cols=107 Identities=9% Similarity=0.048 Sum_probs=57.3
Q ss_pred cCCCCEEEEEcCCCCcCHHHHHHHHHHHHhC--CCEEEEEeCCCC--CCCCCCCCCceEEecCCCCCCCccCcccHHHHH
Q 012678 11 QKKGRRVILFPLPLQGHINPMLQLASILYSK--GFSITIIHTNFN--SPNPSNYPHFSFNSISESLWESEVSTENAISLL 86 (458)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (458)
..+++||+++.++. ||- +..|.+...+- ..+|..+.+... ....+...|+.+..+|... . + .
T Consensus 85 ~~~~~ri~vl~Sg~-g~n--l~~ll~~~~~g~l~~~i~~Visn~~~a~~~~A~~~gIp~~~~~~~~----~---~---r- 150 (287)
T 3nrb_A 85 RTDRKKVVIMVSKF-DHC--LGDLLYRHRLGELDMEVVGIISNHPREALSVSLVGDIPFHYLPVTP----A---T---K- 150 (287)
T ss_dssp TTCCCEEEEEECSC-CHH--HHHHHHHHHHTSSCCEEEEEEESSCGGGCCCCCCTTSCEEECCCCG----G---G---H-
T ss_pred cCCCcEEEEEEeCC-CcC--HHHHHHHHHCCCCCeEEEEEEeCChHHHHHHHHHcCCCEEEEeccC----c---c---h-
Confidence 45678999998887 653 33444444332 467777665422 2223333578777776421 0 0 0
Q ss_pred HHHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCch-hhHHHHHHHcCCCeEEEecc
Q 012678 87 TVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 87 ~~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 143 (458)
...... +++.+.+ .+||+||.-.+. .-...+-..+.-.++-++++
T Consensus 151 ----~~~~~~---~~~~l~~-----~~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 151 ----AAQESQ---IKNIVTQ-----SQADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp ----HHHHHH---HHHHHHH-----HTCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred ----hhHHHH---HHHHHHH-----hCCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
Confidence 000112 2233333 579999988765 33344455555567766666
No 299
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=26.02 E-value=63 Score=28.39 Aligned_cols=33 Identities=18% Similarity=0.256 Sum_probs=22.7
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
|+|++. |+.|.+- ..++++|.++||+|+.++-.
T Consensus 5 ~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 5 SRVLIV--GGTGYIG--KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCS
T ss_pred CEEEEE--cCCcHHH--HHHHHHHHhCCCcEEEEECC
Confidence 455544 3335553 46789999999999988653
No 300
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=25.98 E-value=92 Score=25.52 Aligned_cols=38 Identities=11% Similarity=0.101 Sum_probs=27.2
Q ss_pred CCCEEEEEcCCCCcCHHHHH-HHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQGHINPML-QLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~ 50 (458)
+.|||+++-....|+..-+. .+++.|.+.|++|.++--
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 34788888777778766544 356666778999988765
No 301
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=25.84 E-value=2e+02 Score=22.14 Aligned_cols=37 Identities=16% Similarity=0.030 Sum_probs=28.1
Q ss_pred CEEEEEcCCCCc---CHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQG---HINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~G---H~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
..++++++|+.| .-.-+..+.+.|.+.+.++++++..
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~ 60 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDG 60 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCS
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECC
Confidence 457788888876 4556677888888778888888764
No 302
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=25.73 E-value=59 Score=26.90 Aligned_cols=27 Identities=11% Similarity=-0.006 Sum_probs=24.5
Q ss_pred CCCCcCHHHHHHHHHHHHhCCCEEEEE
Q 012678 22 LPLQGHINPMLQLASILYSKGFSITII 48 (458)
Q Consensus 22 ~~~~GH~~p~l~La~~L~~rGh~Vt~~ 48 (458)
-++-|-..-...||..|+++|++|.++
T Consensus 10 kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 10 DTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp STTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 367799999999999999999999986
No 303
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=25.73 E-value=91 Score=26.82 Aligned_cols=34 Identities=18% Similarity=0.080 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| --..+|+.|+++|++|.++..
T Consensus 26 ~gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r 59 (266)
T 3grp_A 26 TGRKALVTGATGG---IGEAIARCFHAQGAIVGLHGT 59 (266)
T ss_dssp TTCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578889888743 346789999999999988764
No 304
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=25.69 E-value=71 Score=27.11 Aligned_cols=36 Identities=22% Similarity=0.225 Sum_probs=29.1
Q ss_pred EEEEEc--CCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 16 RVILFP--LPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 16 ~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
|++.+. -++-|-..-...||..|+++|+.|.++-.+
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFA 40 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 555553 356688999999999999999999998665
No 305
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=25.67 E-value=73 Score=28.47 Aligned_cols=33 Identities=9% Similarity=0.153 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+|||+|+-.+..+ +...++|.++||+|..+.+.
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~ 34 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQ 34 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeC
Confidence 5899999877644 35568888899999887774
No 306
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=25.58 E-value=1.2e+02 Score=24.35 Aligned_cols=82 Identities=11% Similarity=-0.041 Sum_probs=45.4
Q ss_pred EEEEEcCcccc---CCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCC
Q 012678 273 VMYVSFGSIVV---VNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPA 349 (458)
Q Consensus 273 ~i~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~ 349 (458)
+-.++.|+... .....-..+.+.|++.|..+.+..-- ...++.+.+.+ ...+..++
T Consensus 6 v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv---------~Dd~~~I~~~l------------~~a~~~~D 64 (172)
T 3kbq_A 6 ASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVV---------MDDLDEIGWAF------------RVALEVSD 64 (172)
T ss_dssp EEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEE---------CSCHHHHHHHH------------HHHHHHCS
T ss_pred EEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEe---------CCCHHHHHHHH------------HHHHhcCC
Confidence 55667776532 22333445677788888876654321 11223332110 22344577
Q ss_pred ccccccccCch-----hHHHHHh--hCCccccccc
Q 012678 350 VGGFWTHNGWN-----STLESIC--EGVPMICQPC 377 (458)
Q Consensus 350 ~~~~I~HgG~~-----s~~eal~--~GvP~l~~P~ 377 (458)
+ +||-||.| -|.|+++ .|+++...|-
T Consensus 65 l--VittGG~g~~~~D~T~ea~a~~~~~~l~~~~e 97 (172)
T 3kbq_A 65 L--VVSSGGLGPTFDDMTVEGFAKCIGQDLRIDED 97 (172)
T ss_dssp E--EEEESCCSSSTTCCHHHHHHHHHTCCCEECHH
T ss_pred E--EEEcCCCcCCcccchHHHHHHHcCCCeeeCHH
Confidence 7 99999987 3556664 5777766553
No 307
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=25.53 E-value=2.6e+02 Score=22.32 Aligned_cols=140 Identities=14% Similarity=0.128 Sum_probs=77.2
Q ss_pred CCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCC
Q 012678 270 AKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPA 349 (458)
Q Consensus 270 ~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~ 349 (458)
..|.|-|-+||.. +....++....|+.++..+-..+... +..|+.+.+ |+-... -...+
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa--------HR~p~~l~~----------~~~~a~-~~g~~ 69 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA--------HRMPDEMFD----------YAEKAR-ERGLR 69 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHHH----------HHHHHT-TTTCS
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc--------ccCHHHHHH----------HHHHHH-hcCCe
Confidence 4677888889876 55567788888999988765555432 335665422 111110 12234
Q ss_pred ccccccccCc----hhHHHHHhhCCcccccccccchh--hHH-HHHHHHH--hcceecC--C---cccHHHHHHHHHHHh
Q 012678 350 VGGFWTHNGW----NSTLESICEGVPMICQPCFGDQL--VNA-RYVSHVW--RVGLHLE--R---KFERREIETAIRRVT 415 (458)
Q Consensus 350 ~~~~I~HgG~----~s~~eal~~GvP~l~~P~~~DQ~--~na-~~v~~~~--G~G~~l~--~---~~~~~~l~~~i~~ll 415 (458)
+ +|.-.|. .++..+ ..-+|+|.+|....-. ..+ .-+.. + |+.+..- . ..+..-++..|- -+
T Consensus 70 V--iIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivq-MP~Gvpvatv~i~~~~a~NAallA~~IL-a~ 144 (173)
T 4grd_A 70 A--IIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQ-MPKGVPVATFAIGEAGAANAALFAVSIL-SG 144 (173)
T ss_dssp E--EEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHC-CCTTSCCEECCSSHHHHHHHHHHHHHHH-TT
T ss_pred E--EEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHh-CCCCCCceEEecCCcchHHHHHHHHHHH-cC
Confidence 4 7766553 344444 3478999999864321 111 11222 2 3332211 1 123333443332 23
Q ss_pred ccchhHHHHHHHHHHHHHHHHHH
Q 012678 416 VEAEGQEMRERIMHLKEKLELSL 438 (458)
Q Consensus 416 ~~~~~~~~~~~a~~~~~~~~~~~ 438 (458)
+| +.++++.+.++++.++..
T Consensus 145 ~d---~~l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 145 NS---VDYANRLAAFRVRQNEAA 164 (173)
T ss_dssp SC---HHHHHHHHHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHHHHHHHHH
Confidence 55 789999999998887654
No 308
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=25.50 E-value=95 Score=26.56 Aligned_cols=34 Identities=12% Similarity=0.042 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|+++.-
T Consensus 10 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 10 TDKVVVISGVGPA---LGTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp TTCEEEEESCCTT---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeC
Confidence 4578888888754 346789999999999888754
No 309
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=25.47 E-value=89 Score=26.91 Aligned_cols=38 Identities=13% Similarity=0.130 Sum_probs=28.8
Q ss_pred cCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
...+.|.++++.++.| =-..+|++|+++|++|+++.-.
T Consensus 10 ~~~~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 47 (269)
T 3vtz_A 10 EEFTDKVAIVTGGSSG---IGLAVVDALVRYGAKVVSVSLD 47 (269)
T ss_dssp CTTTTCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3446788888888743 3467899999999999887653
No 310
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=25.43 E-value=78 Score=27.67 Aligned_cols=33 Identities=15% Similarity=0.093 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEe
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIH 49 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (458)
+.|+++++.++.| =-..+|+.|+++|++|+++.
T Consensus 8 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 8 TVPVALVTGAAKR---LGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CCCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCeEEEEc
Confidence 3478888887743 35689999999999999887
No 311
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=25.39 E-value=65 Score=27.64 Aligned_cols=32 Identities=31% Similarity=0.315 Sum_probs=25.2
Q ss_pred CCeeEEE-ecCch-hhHHHHHHHcCCCeEEEecc
Q 012678 112 EPVTCLI-TDAIW-HFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 112 ~~pDlvI-~D~~~-~~~~~~A~~lgiP~v~~~~~ 143 (458)
..||+|| .|+.. .-+..=|.++|||.|.+.-+
T Consensus 150 ~~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDT 183 (253)
T 3bch_A 150 REPRLLVVTDPRADHQPLTEASYVNLPTIALCNT 183 (253)
T ss_dssp CSCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCCEEEEECCCccchHHHHHHHhCCCEEEEEcC
Confidence 4688886 67644 66788899999999998766
No 312
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=25.31 E-value=1.1e+02 Score=21.59 Aligned_cols=34 Identities=9% Similarity=-0.000 Sum_probs=25.3
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.-+|++++..+ ......++.|.+.||+|.++..
T Consensus 55 ~~~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 55 KNEIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp TTSEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC
Confidence 445788888654 2466788999999999887754
No 313
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=25.25 E-value=3.4e+02 Score=24.01 Aligned_cols=90 Identities=16% Similarity=0.152 Sum_probs=47.6
Q ss_pred cEEEEEcCccccCCHHHHHHHHHHHHhC-CCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCc
Q 012678 272 SVMYVSFGSIVVVNVTEFLEIAWGLANS-RVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAV 350 (458)
Q Consensus 272 ~~i~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~ 350 (458)
.+.+|.+|.+.. ..+.++.+. +..++.++..+. + -.+.+.+... ...-+-...++|..+++
T Consensus 7 ~igiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~----~----~~~~~~~~~~---~~~~~~~~~~ll~~~~~ 68 (330)
T 3e9m_A 7 RYGIMSTAQIVP-------RFVAGLRESAQAEVRGIASRRL----E----NAQKMAKELA---IPVAYGSYEELCKDETI 68 (330)
T ss_dssp EEEECSCCTTHH-------HHHHHHHHSSSEEEEEEBCSSS----H----HHHHHHHHTT---CCCCBSSHHHHHHCTTC
T ss_pred EEEEECchHHHH-------HHHHHHHhCCCcEEEEEEeCCH----H----HHHHHHHHcC---CCceeCCHHHHhcCCCC
Confidence 477788887663 345666664 445554444321 0 0122222211 11234456778875555
Q ss_pred cccccccCch----hHHHHHhhCCcccc-ccccc
Q 012678 351 GGFWTHNGWN----STLESICEGVPMIC-QPCFG 379 (458)
Q Consensus 351 ~~~I~HgG~~----s~~eal~~GvP~l~-~P~~~ 379 (458)
.+++---... .+.+|+.+|+++++ -|+..
T Consensus 69 D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~ 102 (330)
T 3e9m_A 69 DIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTL 102 (330)
T ss_dssp SEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCS
T ss_pred CEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCC
Confidence 5566544333 36788999998876 35443
No 314
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=25.24 E-value=85 Score=27.03 Aligned_cols=34 Identities=15% Similarity=0.203 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|+++.-
T Consensus 10 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 43 (271)
T 3tzq_B 10 ENKVAIITGACGG---IGLETSRVLARAGARVVLADL 43 (271)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEcC
Confidence 4578889888743 346889999999999988765
No 315
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=25.23 E-value=1e+02 Score=22.76 Aligned_cols=35 Identities=9% Similarity=0.067 Sum_probs=25.9
Q ss_pred EEEEcCCCCcCH--HHHHHHHHHHHhCCCEEEEEeCC
Q 012678 17 VILFPLPLQGHI--NPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 17 il~~~~~~~GH~--~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+++++.+-+|+- .-.+.+|..+.+.||+|.++-..
T Consensus 5 ~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~ 41 (119)
T 2d1p_B 5 AFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIA 41 (119)
T ss_dssp EEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECG
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEeh
Confidence 344445555765 66788999999999999988664
No 316
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=25.20 E-value=1.5e+02 Score=25.35 Aligned_cols=37 Identities=16% Similarity=0.258 Sum_probs=28.0
Q ss_pred CEEEEEcCCCCc-----------CHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQG-----------HINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~G-----------H~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.||+++.....+ ...=++.-...|.+.|++|+++++.
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 378888776421 2455777888999999999999985
No 317
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=25.19 E-value=65 Score=29.74 Aligned_cols=35 Identities=11% Similarity=0.050 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
++.+||+++-.+.. .+.+++++.+.|++|+++..+
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 45678998877753 366999999999999999653
No 318
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=25.15 E-value=55 Score=29.03 Aligned_cols=28 Identities=18% Similarity=0.417 Sum_probs=24.6
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEE
Q 012678 16 RVILFPLPLQGHINPMLQLASILYSKGFSITII 48 (458)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 48 (458)
||.|+=.+..|. ++|+.|.++||+|++.
T Consensus 5 kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~ 32 (300)
T 3obb_A 5 QIAFIGLGHMGA-----PMATNLLKAGYLLNVF 32 (300)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEE
T ss_pred EEEEeeehHHHH-----HHHHHHHhCCCeEEEE
Confidence 799998888774 7899999999999887
No 319
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=25.11 E-value=51 Score=28.81 Aligned_cols=31 Identities=26% Similarity=0.341 Sum_probs=23.6
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
|||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNR 32 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 688888555433 5678999999999997744
No 320
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=25.02 E-value=1.3e+02 Score=24.17 Aligned_cols=39 Identities=13% Similarity=0.095 Sum_probs=25.4
Q ss_pred CCCCEEEEEcC-CCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 12 KKGRRVILFPL-PLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+..|++++.. .+.= -.=++.-.+.|.+.|++|+++++.
T Consensus 5 ~~t~~~v~il~~~gFe-~~E~~~p~~~l~~ag~~V~~~s~~ 44 (177)
T 4hcj_A 5 GKTNNILYVMSGQNFQ-DEEYFESKKIFESAGYKTKVSSTF 44 (177)
T ss_dssp CCCCEEEEECCSEEEC-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCEEEEECCCCcc-HHHHHHHHHHHHHCCCEEEEEECC
Confidence 33446555544 3332 333566778888999999999985
No 321
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=25.00 E-value=38 Score=30.13 Aligned_cols=32 Identities=13% Similarity=0.018 Sum_probs=25.3
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+|||+++-.|+.|- .+|..|+ +||+|+++...
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECC
Confidence 48999997776653 5678888 99999999764
No 322
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=24.92 E-value=83 Score=26.82 Aligned_cols=34 Identities=18% Similarity=0.035 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHh-CCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYS-KGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~ 50 (458)
++|.++++.++ |-+ -..+++.|++ +|++|+++.-
T Consensus 3 ~~k~vlITGas-ggI--G~~~a~~L~~~~g~~V~~~~r 37 (276)
T 1wma_A 3 GIHVALVTGGN-KGI--GLAIVRDLCRLFSGDVVLTAR 37 (276)
T ss_dssp CCCEEEESSCS-SHH--HHHHHHHHHHHSSSEEEEEES
T ss_pred CCCEEEEeCCC-cHH--HHHHHHHHHHhcCCeEEEEeC
Confidence 45677787665 433 4578999999 9999988865
No 323
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=24.90 E-value=98 Score=26.18 Aligned_cols=34 Identities=21% Similarity=0.175 Sum_probs=26.5
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|+.|+++|++|.++..
T Consensus 8 ~gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 41 (248)
T 3op4_A 8 EGKVALVTGASRG---IGKAIAELLAERGAKVIGTAT 41 (248)
T ss_dssp TTCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578889888743 346789999999999988754
No 324
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=24.83 E-value=79 Score=26.97 Aligned_cols=34 Identities=12% Similarity=0.022 Sum_probs=26.5
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|.++.-
T Consensus 7 ~gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 7 QGKKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578888887753 346899999999999988764
No 325
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=24.81 E-value=88 Score=26.89 Aligned_cols=34 Identities=21% Similarity=0.122 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++. - =-..+|+.|+++|++|+++.-
T Consensus 20 ~~k~~lVTGas~-g--IG~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 20 RGRVALVTGGSR-G--LGFGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp TTCEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 457888887763 2 346889999999999988764
No 326
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=24.68 E-value=71 Score=27.21 Aligned_cols=37 Identities=11% Similarity=-0.004 Sum_probs=24.5
Q ss_pred HHHHHhhCCCCCCCeeEEEecCch--hhHHHHHHHcCCCeEEEe
Q 012678 100 CLAKLISNGDQEEPVTCLITDAIW--HFAQTVADTLRLPRIVLR 141 (458)
Q Consensus 100 ~l~~l~~~~~~~~~pDlvI~D~~~--~~~~~~A~~lgiP~v~~~ 141 (458)
-++++++ .+||+||..... .....--+..|||++.+.
T Consensus 51 n~E~i~~-----l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 51 SSEGILS-----LRPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp CHHHHHT-----TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHc-----cCCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 3566665 689999986542 223334466899998874
No 327
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=24.66 E-value=72 Score=27.76 Aligned_cols=34 Identities=18% Similarity=0.118 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
..|+++++.++.| --..+|++|+++|++|+++..
T Consensus 24 ~~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 24 MTKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3478888888753 346899999999999988754
No 328
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=24.65 E-value=1.3e+02 Score=24.85 Aligned_cols=36 Identities=11% Similarity=0.207 Sum_probs=27.6
Q ss_pred EEEEEcCC---------CCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 16 RVILFPLP---------LQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 16 ~il~~~~~---------~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
||+++... ..-...-+....+.|.+.|++|+++++.
T Consensus 7 kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~ 51 (224)
T 1u9c_A 7 RVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQ 51 (224)
T ss_dssp EEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred eEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCC
Confidence 78888772 2244566777888888899999999985
No 329
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=24.64 E-value=63 Score=23.16 Aligned_cols=31 Identities=19% Similarity=0.358 Sum_probs=22.4
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCC-CEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKG-FSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~ 50 (458)
++|+++ |+ |.+ -..+++.|.++| |+|+++..
T Consensus 6 ~~v~I~--G~-G~i--G~~~~~~l~~~g~~~v~~~~r 37 (118)
T 3ic5_A 6 WNICVV--GA-GKI--GQMIAALLKTSSNYSVTVADH 37 (118)
T ss_dssp EEEEEE--CC-SHH--HHHHHHHHHHCSSEEEEEEES
T ss_pred CeEEEE--CC-CHH--HHHHHHHHHhCCCceEEEEeC
Confidence 567766 33 443 356889999999 99888765
No 330
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=24.60 E-value=65 Score=24.54 Aligned_cols=36 Identities=11% Similarity=0.172 Sum_probs=24.1
Q ss_pred CEEEEEcCCCCcCHHHHH-HHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPML-QLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~ 50 (458)
|||+++-....|+..-+. .|++.|.++|++|.++--
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~ 37 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDA 37 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEG
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEeh
Confidence 677777666668765433 456666667999987754
No 331
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=24.50 E-value=79 Score=26.36 Aligned_cols=36 Identities=17% Similarity=0.193 Sum_probs=28.9
Q ss_pred EEEEEc--CCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 16 RVILFP--LPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 16 ~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
|++.+. -++.|-..-...||..|+++|++|.++-.+
T Consensus 3 ~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (237)
T 1g3q_A 3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 444443 356689999999999999999999999665
No 332
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=24.47 E-value=55 Score=28.45 Aligned_cols=33 Identities=27% Similarity=0.187 Sum_probs=27.1
Q ss_pred CEEEEEcCCCC--cCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQ--GHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~--GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.+|++++.++- |+ -+.+|+.|+++|++|+++..
T Consensus 80 ~~VlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~ 114 (265)
T 2o8n_A 80 PTVLVICGPGNNGGD---GLVCARHLKLFGYQPTIYYP 114 (265)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEe
Confidence 38999998764 33 47899999999999999865
No 333
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=24.44 E-value=73 Score=27.19 Aligned_cols=38 Identities=11% Similarity=0.084 Sum_probs=29.7
Q ss_pred CCCCEEEEEcCC--CCcCHHHHHHHHHHHHhCCCEEEEEe
Q 012678 12 KKGRRVILFPLP--LQGHINPMLQLASILYSKGFSITIIH 49 (458)
Q Consensus 12 ~~~~~il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (458)
.+.+|.+|++.. +-|=..-.+.|++.|.++|.+|.++=
T Consensus 18 ~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 18 YFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp -CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 334576666655 44888899999999999999999974
No 334
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=24.40 E-value=1.5e+02 Score=25.90 Aligned_cols=111 Identities=8% Similarity=0.053 Sum_probs=0.0
Q ss_pred cccCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC-CCCCCCCCCCCceEEecCCCCCCCccCcccHHHHHH
Q 012678 9 VQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN-FNSPNPSNYPHFSFNSISESLWESEVSTENAISLLT 87 (458)
Q Consensus 9 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (458)
....+++||+++.++. ||-.-.+--+..--+-..+|..+.+. ......+...|+.+..+|.....
T Consensus 85 ~~~~~~~ri~vl~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~~~~~~~~~~------------- 150 (286)
T 3n0v_A 85 TAPNHRPKVVIMVSKA-DHCLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWHKIPYYHFALDPKD------------- 150 (286)
T ss_dssp ECTTCCCEEEEEESSC-CHHHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHTTCCEEECCCBTTB-------------
T ss_pred ecCCCCcEEEEEEeCC-CCCHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHcCCCEEEeCCCcCC-------------
Q ss_pred HHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCch-hhHHHHHHHcCCCeEEEecc
Q 012678 88 VLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 88 ~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 143 (458)
.......+.+.+++ .+||+||.-.+. .-...+-..+.-.++-++++
T Consensus 151 --r~~~~~~~~~~l~~--------~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 151 --KPGQERKVLQVIEE--------TGAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp --HHHHHHHHHHHHHH--------HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred --HHHHHHHHHHHHHh--------cCCCEEEecccccccCHHHHhhhcCCeEEeccc
No 335
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=24.39 E-value=1.3e+02 Score=25.62 Aligned_cols=37 Identities=14% Similarity=0.361 Sum_probs=27.5
Q ss_pred CEEEEEcCCCCc-----------CHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQG-----------HINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~G-----------H~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.||+++.....+ ...=++.....|.+.|++|+++++.
T Consensus 4 ~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 4 KRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 378888776422 2245777788899999999999985
No 336
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=24.37 E-value=1.2e+02 Score=27.52 Aligned_cols=35 Identities=14% Similarity=0.132 Sum_probs=23.4
Q ss_pred cEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEc
Q 012678 272 SVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVR 308 (458)
Q Consensus 272 ~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 308 (458)
.+++++.|+.+. ......+.++|.+.|+++.+...
T Consensus 6 ~il~~~~~~~Gh--v~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 6 HILFANVQGHGH--VYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEEeCCCCcc--cccHHHHHHHHHhCCCEEEEEcC
Confidence 467777776543 22345677888888888877764
No 337
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=24.30 E-value=1.6e+02 Score=23.45 Aligned_cols=38 Identities=8% Similarity=0.118 Sum_probs=29.9
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+.+||+++.+++.. ..-+....+.|.+.|++|+++++.
T Consensus 8 ~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (190)
T 2vrn_A 8 TGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLE 45 (190)
T ss_dssp TTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecC
Confidence 45789999887643 455667778888899999999885
No 338
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=24.29 E-value=86 Score=26.95 Aligned_cols=34 Identities=21% Similarity=0.172 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|.++++.++.| --..+|++|+++|++|.++..
T Consensus 28 ~~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 28 TGKNVLITGASKG---IGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp SCCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578888887743 346899999999999988765
No 339
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=24.28 E-value=82 Score=30.11 Aligned_cols=35 Identities=11% Similarity=0.192 Sum_probs=28.9
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhC-CC-EEEEEeCC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSK-GF-SITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh-~Vt~~~~~ 51 (458)
++.|||.|+-.|..| +++|..|+++ || +|+++-..
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~ 52 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRN 52 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECC
Confidence 456899999777766 5789999999 99 99998654
No 340
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=24.27 E-value=1.3e+02 Score=22.04 Aligned_cols=49 Identities=8% Similarity=0.055 Sum_probs=31.5
Q ss_pred hCCcccccccccchhhHHHHHHHHHhcceecCCcccHHHHHHHHHHHhcc
Q 012678 368 EGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 417 (458)
Q Consensus 368 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 417 (458)
..+|+|++--..+.........+ .|+--.+.+.++.++|..+|+++++.
T Consensus 79 ~~~~ii~~s~~~~~~~~~~~~~~-~g~~~~l~kP~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 79 RDLAIVVVSANAREGELEFNSQP-LAVSTWLEKPIDENLLILSLHRAIDN 127 (140)
T ss_dssp TTCEEEEECTTHHHHHHHHCCTT-TCCCEEECSSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCChHHHHHHhhh-cCCCEEEeCCCCHHHHHHHHHHHHHh
Confidence 36788877544443332213333 25544555568999999999999976
No 341
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=24.27 E-value=68 Score=29.37 Aligned_cols=40 Identities=13% Similarity=0.080 Sum_probs=32.8
Q ss_pred CCCCEEEEEcC--CCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 12 KKGRRVILFPL--PLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+++|++.+.. ||-|-..-...||..|+++|++|.++-.+
T Consensus 140 ~~~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 140 NDKSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp TTSCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCCceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 45677666654 57799999999999999999999999765
No 342
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=24.22 E-value=69 Score=28.53 Aligned_cols=38 Identities=5% Similarity=0.092 Sum_probs=24.8
Q ss_pred HHHHhhCCCCCCCeeEEEecCch-hhHHHHHHHcCCCeEEEecc
Q 012678 101 LAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 101 l~~l~~~~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 143 (458)
++++++ .+||+||..... .....--+..|||++.+...
T Consensus 77 ~E~i~~-----l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~ 115 (326)
T 3psh_A 77 IESLLA-----LKPDVVFVTNYAPSEMIKQISDVNIPVVAISLR 115 (326)
T ss_dssp HHHHHH-----TCCSEEEEETTCCHHHHHHHHTTTCCEEEECSC
T ss_pred HHHHHc-----cCCCEEEEeCCCChHHHHHHHHcCCCEEEEecc
Confidence 455555 579999987543 22334446679999987543
No 343
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=24.21 E-value=3.3e+02 Score=24.51 Aligned_cols=92 Identities=11% Similarity=0.090 Sum_probs=53.5
Q ss_pred CcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCc
Q 012678 271 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAV 350 (458)
Q Consensus 271 ~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~ 350 (458)
-.+.+|.+|.+.. ..++.++...+.+++.++..... -.+.+.+..+ ...-|-...++|..+++
T Consensus 27 irvgiiG~G~~~~------~~~~~~~~~~~~~lvav~d~~~~--------~a~~~a~~~~---~~~~~~~~~~ll~~~~v 89 (361)
T 3u3x_A 27 LRFAAVGLNHNHI------YGQVNCLLRAGARLAGFHEKDDA--------LAAEFSAVYA---DARRIATAEEILEDENI 89 (361)
T ss_dssp CEEEEECCCSTTH------HHHHHHHHHTTCEEEEEECSCHH--------HHHHHHHHSS---SCCEESCHHHHHTCTTC
T ss_pred cEEEEECcCHHHH------HHHHHHhhcCCcEEEEEEcCCHH--------HHHHHHHHcC---CCcccCCHHHHhcCCCC
Confidence 4578888886542 22344445567777776654310 1122222221 12234567888988777
Q ss_pred cccccccCc----hhHHHHHhhCCcccc-ccccc
Q 012678 351 GGFWTHNGW----NSTLESICEGVPMIC-QPCFG 379 (458)
Q Consensus 351 ~~~I~HgG~----~s~~eal~~GvP~l~-~P~~~ 379 (458)
.+++--... --+.+||.+|+++++ -|+..
T Consensus 90 D~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~ 123 (361)
T 3u3x_A 90 GLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMT 123 (361)
T ss_dssp CEEEECCCHHHHHHHHHHHHHTTCEEEEESCSCS
T ss_pred CEEEEeCChHHHHHHHHHHHHCCCeEEEeCCCCC
Confidence 667754443 246788999999988 57654
No 344
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=24.21 E-value=90 Score=26.98 Aligned_cols=34 Identities=21% Similarity=0.110 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|+.|+++|++|+++.-
T Consensus 9 ~~k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 42 (281)
T 3s55_A 9 EGKTALITGGARG---MGRSHAVALAEAGADIAICDR 42 (281)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeC
Confidence 4578888888753 346789999999999988765
No 345
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=24.10 E-value=68 Score=24.57 Aligned_cols=35 Identities=11% Similarity=0.058 Sum_probs=29.5
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
..+++++..+. =+-|++.+++.|.++|.+|+++ ..
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~ 52 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HV 52 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 45888887775 4899999999999999999998 53
No 346
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=24.01 E-value=81 Score=27.57 Aligned_cols=35 Identities=14% Similarity=0.078 Sum_probs=27.3
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+.|+++++.++.| =-..+|++|+++|++|+++...
T Consensus 46 ~gk~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~ 80 (291)
T 3ijr_A 46 KGKNVLITGGDSG---IGRAVSIAFAKEGANIAIAYLD 80 (291)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 4578889888753 3468999999999999887653
No 347
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=24.00 E-value=80 Score=26.92 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=26.5
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| --..+|++|+++|++|+++.-
T Consensus 11 ~~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 44 (256)
T 3gaf_A 11 NDAVAIVTGAAAG---IGRAIAGTFAKAGASVVVTDL 44 (256)
T ss_dssp TTCEEEECSCSSH---HHHHHHHHHHHHTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578888888743 346789999999999888754
No 348
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=23.99 E-value=1e+02 Score=22.98 Aligned_cols=35 Identities=14% Similarity=0.273 Sum_probs=19.5
Q ss_pred ccCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEE
Q 012678 10 QQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITII 48 (458)
Q Consensus 10 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 48 (458)
...+.+||+++- .|-.-...|.+.|.+.|++|+.+
T Consensus 10 ~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~ 44 (143)
T 3m6m_D 10 ARVRSMRMLVAD----DHEANRMVLQRLLEKAGHKVLCV 44 (143)
T ss_dssp -----CEEEEEC----SSHHHHHHHHHHHHC--CEEEEE
T ss_pred cccccceEEEEe----CCHHHHHHHHHHHHHcCCeEEEe
Confidence 345568888874 45555666777777778887654
No 349
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=23.97 E-value=71 Score=27.37 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=29.4
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 17 VILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 17 il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
|.|..-|+-|-..-...||..|+++|++|.++=.+
T Consensus 4 I~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 4 VAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 55555667799999999999999999999998654
No 350
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=23.86 E-value=85 Score=26.89 Aligned_cols=34 Identities=9% Similarity=0.044 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| --..+|+.|+++|++|.++..
T Consensus 10 ~~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 10 KNKVIVIAGGIKN---LGALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHTTSSCEEEEEES
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 4578889988754 357899999999999988753
No 351
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=23.83 E-value=92 Score=26.03 Aligned_cols=32 Identities=25% Similarity=0.169 Sum_probs=23.7
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEe
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIH 49 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (458)
||.++++.++ |-+ -..++++|+++|++|+++.
T Consensus 1 ~k~vlITGas-ggi--G~~~a~~l~~~G~~v~~~~ 32 (245)
T 2ph3_A 1 MRKALITGAS-RGI--GRAIALRLAEDGFALAIHY 32 (245)
T ss_dssp CCEEEETTTT-SHH--HHHHHHHHHTTTCEEEEEE
T ss_pred CCEEEEeCCC-chH--HHHHHHHHHHCCCEEEEEc
Confidence 4566777665 433 4578999999999998873
No 352
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=23.80 E-value=83 Score=27.26 Aligned_cols=34 Identities=15% Similarity=0.128 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|+++..
T Consensus 26 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 59 (277)
T 4dqx_A 26 NQRVCIVTGGGSG---IGRATAELFAKNGAYVVVADV 59 (277)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578888888743 346789999999999988764
No 353
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=23.79 E-value=1.1e+02 Score=25.46 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=24.0
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 16 RVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
|.++++.++ |-+ -..++++|+++||+|+++..
T Consensus 6 k~vlVtGas-ggi--G~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 6 GAVLITGAS-RGI--GEATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp CEEEESSTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEEC
Confidence 566777665 433 46789999999999988765
No 354
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=23.75 E-value=69 Score=29.21 Aligned_cols=36 Identities=19% Similarity=0.248 Sum_probs=22.7
Q ss_pred cccCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 9 VQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 9 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.++.++|||+++ |+ |.+-. .+|+.|+ +.|+|+++.-
T Consensus 11 ~~~g~~mkilvl--Ga-G~vG~--~~~~~L~-~~~~v~~~~~ 46 (365)
T 3abi_A 11 HIEGRHMKVLIL--GA-GNIGR--AIAWDLK-DEFDVYIGDV 46 (365)
T ss_dssp -----CCEEEEE--CC-SHHHH--HHHHHHT-TTSEEEEEES
T ss_pred cccCCccEEEEE--CC-CHHHH--HHHHHHh-cCCCeEEEEc
Confidence 456778999998 55 66654 4677775 5689988754
No 355
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=23.72 E-value=1.1e+02 Score=26.05 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=24.7
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|.++++.++. - =-..++++|+++||+|+++.-
T Consensus 7 ~k~vlVTGas~-g--IG~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 7 GKVALVTGAAQ-G--IGRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp TCEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC-c--HHHHHHHHHHHCCCEEEEEEC
Confidence 36777777663 2 246789999999999988764
No 356
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=23.65 E-value=1.1e+02 Score=26.03 Aligned_cols=35 Identities=14% Similarity=0.221 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+.|+++++.++.| + -..+|++|+++|++|+++.-.
T Consensus 6 ~~k~~lVTGas~g-I--G~aia~~l~~~G~~V~~~~r~ 40 (257)
T 3tpc_A 6 KSRVFIVTGASSG-L--GAAVTRMLAQEGATVLGLDLK 40 (257)
T ss_dssp TTCEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 4578888888742 2 467999999999999887653
No 357
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=23.62 E-value=83 Score=26.70 Aligned_cols=34 Identities=15% Similarity=0.050 Sum_probs=26.0
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.|.++++.++.| =-..+|++|+++|++|+++.-.
T Consensus 22 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 22 SKNILVLGGSGA---LGAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 367888877642 3468999999999998888653
No 358
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=23.55 E-value=84 Score=28.81 Aligned_cols=37 Identities=19% Similarity=0.326 Sum_probs=30.2
Q ss_pred CCEEEEEcCCCCc-CHHH-HHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQG-HINP-MLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~G-H~~p-~l~La~~L~~rGh~Vt~~~~~ 51 (458)
..+|++++=-+ | .+.. ++.|++.|.++|++|++.+-.
T Consensus 212 ~k~Vl~v~DNA-G~Eiv~D~L~La~~Ll~~g~kVvl~vK~ 250 (367)
T 1xfi_A 212 WKKAVIFVDNS-GADIILGILPFARELLRRGAQVVLAANE 250 (367)
T ss_dssp CCEEEEECCBT-THHHHHTHHHHHHHHHHTTCEEEEEEBS
T ss_pred CCEEEEEecCC-CchhhccHHHHHHHHHHcCCEEEEEECC
Confidence 35899998888 5 4555 499999999999999988764
No 359
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=23.53 E-value=59 Score=29.95 Aligned_cols=37 Identities=14% Similarity=0.215 Sum_probs=26.8
Q ss_pred cccCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 9 VQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 9 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
|..+...+|+++=.+- --+.+|..|+++|++|+++-.
T Consensus 21 M~~~~~~dV~IVGaG~-----aGl~~A~~L~~~G~~v~v~E~ 57 (398)
T 2xdo_A 21 MNLLSDKNVAIIGGGP-----VGLTMAKLLQQNGIDVSVYER 57 (398)
T ss_dssp --CCTTCEEEEECCSH-----HHHHHHHHHHTTTCEEEEEEC
T ss_pred ccccCCCCEEEECCCH-----HHHHHHHHHHHCCCCEEEEeC
Confidence 3344566888876654 347889999999999999854
No 360
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=23.49 E-value=65 Score=28.45 Aligned_cols=28 Identities=21% Similarity=0.471 Sum_probs=24.3
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEE
Q 012678 16 RVILFPLPLQGHINPMLQLASILYSKGFSITII 48 (458)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 48 (458)
||.|+=.+..| .++|+.|+++||+|++.
T Consensus 7 kIgfIGLG~MG-----~~mA~~L~~~G~~V~v~ 34 (297)
T 4gbj_A 7 KIAFLGLGNLG-----TPIAEILLEAGYELVVW 34 (297)
T ss_dssp EEEEECCSTTH-----HHHHHHHHHTTCEEEEC
T ss_pred cEEEEecHHHH-----HHHHHHHHHCCCeEEEE
Confidence 79999888776 47899999999999885
No 361
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=23.48 E-value=86 Score=26.61 Aligned_cols=34 Identities=18% Similarity=0.176 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|+.|+++|++|+++.-
T Consensus 11 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 11 NDRIILVTGASDG---IGREAAMTYARYGATVILLGR 44 (252)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578888888742 246789999999999988764
No 362
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=23.43 E-value=86 Score=26.87 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|+.|+++|++|+++.-
T Consensus 7 ~~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 7 SEAVAVVTGGSSG---IGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578888888753 356789999999999888754
No 363
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=23.40 E-value=63 Score=28.43 Aligned_cols=31 Identities=16% Similarity=0.391 Sum_probs=24.7
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
|||.|+=.+..| ..+|+.|+++||+|+++..
T Consensus 4 ~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 4 KQIAFIGLGHMG-----APMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeecHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 689999666655 3678999999999988844
No 364
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=23.38 E-value=1e+02 Score=26.32 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++. -+ -..+|+.|+++|++|++...
T Consensus 3 ~~k~vlVTGas~-gI--G~aia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 3 QNKCALVTGSSR-GV--GKAAAIRLAENGYNIVINYA 36 (258)
T ss_dssp CCCEEEESSCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEecCCc-hH--HHHHHHHHHHCCCEEEEEcC
Confidence 357888888774 23 46789999999999988643
No 365
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=23.37 E-value=1.2e+02 Score=25.39 Aligned_cols=39 Identities=8% Similarity=-0.011 Sum_probs=24.8
Q ss_pred HHHHHhhCCCCCCCeeEEEecCc--hhhHHHHHHHcCCCeEEEecc
Q 012678 100 CLAKLISNGDQEEPVTCLITDAI--WHFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 100 ~l~~l~~~~~~~~~pDlvI~D~~--~~~~~~~A~~lgiP~v~~~~~ 143 (458)
-++++++ .+||+||.... ......--+..|||++.+...
T Consensus 49 n~E~i~~-----l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~ 89 (245)
T 1n2z_A 49 NLERIVA-----LKPDLVIAWRGGNAERQVDQLASLGIKVMWVDAT 89 (245)
T ss_dssp CHHHHHH-----TCCSEEEECTTTSCHHHHHHHHHHTCCEEECCCC
T ss_pred CHHHHhc-----cCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCCC
Confidence 3566665 58999998532 222334445779999986543
No 366
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=23.36 E-value=1.1e+02 Score=25.84 Aligned_cols=37 Identities=16% Similarity=0.224 Sum_probs=23.3
Q ss_pred CCEEEEEcCCCCc-CHHH--HHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQG-HINP--MLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~G-H~~p--~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|||+++...-.. -.+- .-.+++.|.++||+|.++--
T Consensus 1 ~mkiLiI~gspr~~S~t~~l~~~~~~~l~~~g~ev~~~dL 40 (228)
T 3tem_A 1 GKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDL 40 (228)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHHTCEEEEEET
T ss_pred CCEEEEEEeCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEh
Confidence 3787777666543 2222 23356666677999999865
No 367
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=23.36 E-value=84 Score=26.78 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=25.1
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|+++++.++.| =-..+|+.|+++|++|+++..
T Consensus 4 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 36 (260)
T 1x1t_A 4 GKVAVVTGSTSG---IGLGIATALAAQGADIVLNGF 36 (260)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHcCCEEEEEeC
Confidence 367888877643 346889999999999887754
No 368
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=23.35 E-value=71 Score=27.16 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
..|+++++.++.| + -..+|+.|+++|++|.++.-
T Consensus 6 ~~k~~lVTGas~G-I--G~aia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 6 QKGLAIITGASQG-I--GAVIAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CCCEEEEESTTSH-H--HHHHHHHHHHHTCEEEEEES
T ss_pred CCCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEEC
Confidence 4578888887742 2 36889999999999988764
No 369
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=23.31 E-value=1e+02 Score=26.64 Aligned_cols=34 Identities=18% Similarity=0.124 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++. -+ -..+|++|+++|++|+++..
T Consensus 28 ~gk~vlVTGas~-gI--G~aia~~la~~G~~V~~~~r 61 (277)
T 3gvc_A 28 AGKVAIVTGAGA-GI--GLAVARRLADEGCHVLCADI 61 (277)
T ss_dssp TTCEEEETTTTS-TH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEeC
Confidence 457888888774 33 35789999999999988764
No 370
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=23.28 E-value=65 Score=27.40 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=25.0
Q ss_pred cCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
....+||.|+=.|..| ..+|+.|+++||+|++...
T Consensus 16 ~~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r 50 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTR 50 (245)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred ccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 3457899999544433 5678999999999998865
No 371
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=23.26 E-value=1e+02 Score=26.61 Aligned_cols=35 Identities=20% Similarity=0.172 Sum_probs=27.4
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+.|+++++.++.| =-..+|+.|+++|++|+++...
T Consensus 9 ~gk~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 9 QDKVVLVTGGARG---QGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEccc
Confidence 4578888888753 3468999999999999887653
No 372
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=23.21 E-value=1e+02 Score=26.87 Aligned_cols=34 Identities=15% Similarity=0.156 Sum_probs=28.6
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|++++|.++.| =-..+|+.|++.|.+|.++.-
T Consensus 28 ~gKvalVTGas~G---IG~aiA~~la~~Ga~V~i~~r 61 (273)
T 4fgs_A 28 NAKIAVITGATSG---IGLAAAKRFVAEGARVFITGR 61 (273)
T ss_dssp TTCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCcCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 5699999999875 347899999999999988754
No 373
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=23.17 E-value=43 Score=28.33 Aligned_cols=19 Identities=21% Similarity=0.314 Sum_probs=17.0
Q ss_pred HHHHHHHHHhCCCEEEEEe
Q 012678 31 MLQLASILYSKGFSITIIH 49 (458)
Q Consensus 31 ~l~La~~L~~rGh~Vt~~~ 49 (458)
-+.+|..|+++|++|+++=
T Consensus 14 GL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 14 GLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEE
Confidence 4889999999999999983
No 374
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=23.16 E-value=83 Score=26.89 Aligned_cols=34 Identities=12% Similarity=0.016 Sum_probs=26.5
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|.++..
T Consensus 7 ~~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 7 TNRTIVVAGAGRD---IGRACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 4578888887753 346899999999999988744
No 375
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=23.13 E-value=84 Score=27.35 Aligned_cols=35 Identities=11% Similarity=0.225 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+.|+++++.++.| =-..+|++|+++|++|.++.-.
T Consensus 8 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 8 RGKTMFISGGSRG---IGLAIAKRVAADGANVALVAKS 42 (285)
T ss_dssp TTCEEEEESCSSH---HHHHHHHHHHTTTCEEEEEESC
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 4578888888753 3457899999999999887653
No 376
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=23.06 E-value=1.3e+02 Score=26.02 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=25.1
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|+++++.++. - --..+|+.|+++|++|+++.-
T Consensus 22 ~k~vlVTGas~-g--IG~~ia~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 22 SEVALVTGATS-G--IGLEIARRLGKEGLRVFVCAR 54 (277)
T ss_dssp SCEEEEETCSS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 46788887763 2 346789999999999988764
No 377
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=23.03 E-value=96 Score=26.27 Aligned_cols=36 Identities=14% Similarity=0.127 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
..+.|.++++.++.| --..+|++|+++|++|.++..
T Consensus 10 ~~~~k~vlITGas~g---iG~~ia~~l~~~G~~v~~~~~ 45 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGG---IGTSICQRLHKDGFRVVAGCG 45 (256)
T ss_dssp ---CEEEEETTTTSH---HHHHHHHHHHHTTEEEEEEEC
T ss_pred CCCCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 346688899888743 346899999999999988763
No 378
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=23.01 E-value=1.1e+02 Score=25.63 Aligned_cols=34 Identities=24% Similarity=0.187 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++ |-+ -..+|+.|+++|++|.++.-
T Consensus 13 ~~k~vlITGas-~gI--G~~ia~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 13 KGRVILVTGAA-RGI--GAAAARAYAAHGASVVLLGR 46 (247)
T ss_dssp TTCEEEESSTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCC-ChH--HHHHHHHHHHCCCEEEEEec
Confidence 45788888877 333 45789999999999888764
No 379
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=22.96 E-value=1.2e+02 Score=25.85 Aligned_cols=39 Identities=10% Similarity=0.161 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCC--cCHHHHHH-HHHHHHhCCCEEEEEeC
Q 012678 12 KKGRRVILFPLPLQ--GHINPMLQ-LASILYSKGFSITIIHT 50 (458)
Q Consensus 12 ~~~~~il~~~~~~~--GH~~p~l~-La~~L~~rGh~Vt~~~~ 50 (458)
...|||+++....+ |...-+.. +++.+.+.|++|.++--
T Consensus 32 ~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 32 THRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 45689988887765 55444444 56666677999988743
No 380
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=22.96 E-value=76 Score=28.27 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=22.6
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+|+| +++.++ |-+- ..|++.|+++||+|+.+.-
T Consensus 5 ~~~v-lVTGat-G~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 5 KGTI-LVTGGA-GYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SCEE-EEETTT-SHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CcEE-EEecCC-cHHH--HHHHHHHHHCCCcEEEEec
Confidence 4455 444443 4443 5789999999999988754
No 381
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=22.93 E-value=97 Score=28.45 Aligned_cols=72 Identities=13% Similarity=0.126 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCCCccccccccCchhHHH
Q 012678 285 NVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLE 364 (458)
Q Consensus 285 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~~~~~~I~HgG~~s~~e 364 (458)
+.+....+.+++.....+.||...++.. .. ++.++++...+-.+|.. ||-..-..++.-
T Consensus 94 d~~Ra~dL~~af~Dp~i~aI~~~rGGyg-----------a~--------rlLp~LD~~~i~~~PK~--fiGySDiTaL~~ 152 (371)
T 3tla_A 94 IKERAQEFNELVYNPDITCIMSTIGGDN-----------SN--------SLLPFLDYDAIIANPKI--IIGYSDTTALLA 152 (371)
T ss_dssp HHHHHHHHHHHHTCTTEEEEEESCCCSC-----------GG--------GGGGGSCHHHHHHSCCE--EEECGGGHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcccccc-----------HH--------HHHhhcChhhHHhCCcE--EEEechHHHHHH
Confidence 4555777888998888888888877641 11 56667766666667777 877777777767
Q ss_pred HHh--hCCccccccc
Q 012678 365 SIC--EGVPMICQPC 377 (458)
Q Consensus 365 al~--~GvP~l~~P~ 377 (458)
|++ .|++.+-=|.
T Consensus 153 ai~~k~Gl~T~hGP~ 167 (371)
T 3tla_A 153 GIYAKTGLITFYGPA 167 (371)
T ss_dssp HHHHHHCBCEEECCC
T ss_pred HHHHHcCCEEEECcc
Confidence 665 4776665554
No 382
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=22.90 E-value=1e+02 Score=25.06 Aligned_cols=36 Identities=19% Similarity=0.186 Sum_probs=27.9
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
..++++..+..|...-+..+++.|+++|+.|..+-.
T Consensus 28 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 28 APVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 345666666667777889999999999999877654
No 383
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=22.83 E-value=1.2e+02 Score=25.79 Aligned_cols=33 Identities=9% Similarity=0.025 Sum_probs=24.5
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|.++++.++ |-+ -..+|++|+++||+|+++.-
T Consensus 7 ~k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 7 GKVALVSGGA-RGM--GASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp TCEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCC-CHH--HHHHHHHHHHCCCEEEEEeC
Confidence 3667777666 322 45789999999999988764
No 384
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=22.83 E-value=56 Score=29.17 Aligned_cols=32 Identities=6% Similarity=-0.004 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCC-CEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKG-FSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~ 50 (458)
.|||.|+=.|..| ..+|+.|+++| |+|+++..
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr 56 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDL 56 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeC
Confidence 3789998766555 77899999999 99998754
No 385
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=22.82 E-value=1.1e+02 Score=26.90 Aligned_cols=34 Identities=12% Similarity=0.132 Sum_probs=25.9
Q ss_pred cCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEe
Q 012678 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIH 49 (458)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (458)
++.+|||+++... .......+.|.+.||+|.+..
T Consensus 4 ~~~~mki~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 4 MLTGLKIAVIGGD-----ARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCCSCEEEEESBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred cccCCEEEEECCC-----HHHHHHHHHHHhCCCEEEEEe
Confidence 3567899888542 356677899999999998764
No 386
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=22.80 E-value=1.3e+02 Score=24.22 Aligned_cols=33 Identities=12% Similarity=0.066 Sum_probs=22.6
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+||+ +++.++ |-+ -..++++|+ +||+|+++.-.
T Consensus 3 kM~v-lVtGas-g~i--G~~~~~~l~-~g~~V~~~~r~ 35 (202)
T 3d7l_A 3 AMKI-LLIGAS-GTL--GSAVKERLE-KKAEVITAGRH 35 (202)
T ss_dssp SCEE-EEETTT-SHH--HHHHHHHHT-TTSEEEEEESS
T ss_pred CcEE-EEEcCC-cHH--HHHHHHHHH-CCCeEEEEecC
Confidence 5774 444443 444 467899999 99999988653
No 387
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=22.71 E-value=88 Score=26.88 Aligned_cols=34 Identities=9% Similarity=0.031 Sum_probs=27.9
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|++++|.++.| =-..+|+.|+++|.+|.++.-
T Consensus 6 ~gKvalVTGas~G---IG~aiA~~la~~Ga~Vv~~~~ 39 (254)
T 4fn4_A 6 KNKVVIVTGAGSG---IGRAIAKKFALNDSIVVAVEL 39 (254)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEEC
Confidence 4589999998875 357789999999999988754
No 388
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=22.68 E-value=4.3e+02 Score=25.52 Aligned_cols=26 Identities=8% Similarity=-0.116 Sum_probs=20.8
Q ss_pred CCeeEEEecCchhhHHHHHHHcCCCeEEE
Q 012678 112 EPVTCLITDAIWHFAQTVADTLRLPRIVL 140 (458)
Q Consensus 112 ~~pDlvI~D~~~~~~~~~A~~lgiP~v~~ 140 (458)
.+||++|... ....+|+++|||++.+
T Consensus 455 ~~pDl~ig~~---~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 455 LKPDMFFAGI---KEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HCCSEEEECH---HHHHHHHHTTCEEEET
T ss_pred cCCCEEEccc---chhHHHHhcCCCEEEe
Confidence 5799999764 3567899999999864
No 389
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima}
Probab=22.60 E-value=65 Score=29.17 Aligned_cols=36 Identities=17% Similarity=0.049 Sum_probs=28.1
Q ss_pred EEEEEcCCCC--cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 16 RVILFPLPLQ--GHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 16 ~il~~~~~~~--GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
-..+-|.+.. ||..|.+.-...|++.||++.++..+
T Consensus 16 ~~G~~PTG~lHLGn~~g~l~~~~~lQ~~G~~~~~~IaD 53 (340)
T 2g36_A 16 LSGMRPTGKLHIGHLVGALENWVKLQEEGNECFYFVAD 53 (340)
T ss_dssp EEEECCCSSCBHHHHHTHHHHHHHHHHTTCEEEEEECH
T ss_pred EEeeCCCCcccHHhHHHHHHHHHHHHHCCCCEEEEEec
Confidence 3455566643 89898888888899999999998764
No 390
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=22.56 E-value=5.2e+02 Score=24.83 Aligned_cols=33 Identities=24% Similarity=0.389 Sum_probs=23.8
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
..|++++ |.-.-.+.|++-|.+-|.+|+.+.+.
T Consensus 364 GKrvaI~-----gd~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 364 GKRFALW-----GDPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp TCEEEEE-----CSHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCEEEEE-----CCchHHHHHHHHHHHcCCEEEEEEeC
Confidence 3577777 23345567888888889999988764
No 391
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=22.51 E-value=66 Score=27.17 Aligned_cols=31 Identities=10% Similarity=0.027 Sum_probs=23.0
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEE
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITII 48 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 48 (458)
+|+++++.++.| + -..+|+.|+++|++|+++
T Consensus 1 ~k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 1 MVIALVTHARHF-A--GPAAVEALTQDGYTVVCH 31 (244)
T ss_dssp -CEEEESSTTST-T--HHHHHHHHHHTTCEEEEC
T ss_pred CCEEEEECCCCh-H--HHHHHHHHHHCCCEEEEe
Confidence 356777776643 3 357899999999998876
No 392
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=22.47 E-value=93 Score=27.08 Aligned_cols=37 Identities=22% Similarity=0.280 Sum_probs=29.9
Q ss_pred CEEEEEcC--CCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPL--PLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+|++.+.. ++-|-..-...||..|+++|+.|.++-.+
T Consensus 4 ~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 42 (286)
T 2xj4_A 4 TRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLD 42 (286)
T ss_dssp CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECC
Confidence 35555544 57799999999999999999999998664
No 393
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=22.46 E-value=52 Score=28.83 Aligned_cols=31 Identities=23% Similarity=0.310 Sum_probs=23.6
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
|||.|+-.|..|. .+|+.|.+.||+|+++..
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEECS
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 5788886666553 578889999999987744
No 394
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=22.40 E-value=58 Score=31.14 Aligned_cols=33 Identities=12% Similarity=0.128 Sum_probs=26.5
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
..|||.++-.|..| +.+|..|+++||+|+++..
T Consensus 7 ~~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~d~ 39 (478)
T 2y0c_A 7 GSMNLTIIGSGSVG-----LVTGACLADIGHDVFCLDV 39 (478)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCceEEEECcCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 46899998666544 6789999999999999854
No 395
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=22.34 E-value=37 Score=30.41 Aligned_cols=44 Identities=11% Similarity=-0.001 Sum_probs=25.2
Q ss_pred ChhccccccccCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEe
Q 012678 1 MERQKESNVQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIH 49 (458)
Q Consensus 1 ~~~~~~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (458)
|+.........+...+|+++=.+. --+..|..|+++|++|+++-
T Consensus 1 m~~~~~~~~~~~~~~~vvIIG~G~-----aGl~aA~~l~~~g~~v~lie 44 (335)
T 2a87_A 1 MTAPPVHDRAHHPVRDVIVIGSGP-----AGYTAALYAARAQLAPLVFE 44 (335)
T ss_dssp ---------CCCCCEEEEEECCHH-----HHHHHHHHHHHTTCCCEEEC
T ss_pred CCCCCCCccccCCcCCEEEECCCH-----HHHHHHHHHHhCCCeEEEEe
Confidence 444444444444456777775543 24778888999999999985
No 396
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=22.33 E-value=1.1e+02 Score=26.06 Aligned_cols=33 Identities=15% Similarity=-0.068 Sum_probs=24.8
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|.++++.++. - --..+|++|+++|++|+++.-
T Consensus 9 ~k~vlVTGas~-g--iG~~ia~~l~~~G~~V~~~~r 41 (260)
T 2ae2_A 9 GCTALVTGGSR-G--IGYGIVEELASLGASVYTCSR 41 (260)
T ss_dssp TCEEEEESCSS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCc-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 46777887763 2 245789999999999988764
No 397
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=22.31 E-value=1.2e+02 Score=26.54 Aligned_cols=33 Identities=15% Similarity=0.060 Sum_probs=25.1
Q ss_pred CCEEEEEcCCC--CcCHHHHHHHHHHHHhCCCEEEEEe
Q 012678 14 GRRVILFPLPL--QGHINPMLQLASILYSKGFSITIIH 49 (458)
Q Consensus 14 ~~~il~~~~~~--~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (458)
+.|+++++.++ .| + -..+|+.|+++|++|+++.
T Consensus 7 ~~k~~lVTGas~~~G-I--G~aia~~la~~G~~V~~~~ 41 (297)
T 1d7o_A 7 RGKRAFIAGIADDNG-Y--GWAVAKSLAAAGAEILVGT 41 (297)
T ss_dssp TTCEEEEECCSSSSS-H--HHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCCCCC-h--HHHHHHHHHHCCCeEEEee
Confidence 34678888876 33 2 3678999999999998875
No 398
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=22.27 E-value=94 Score=25.53 Aligned_cols=34 Identities=21% Similarity=0.187 Sum_probs=24.1
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHH-hCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILY-SKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~-~rGh~Vt~~~~~ 51 (458)
||.++++..+ |-+ -..++++|+ ++||+|+.+.-.
T Consensus 5 mk~vlVtGas-g~i--G~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITILGAA-GQI--AQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEESTT-SHH--HHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEEEeCC-cHH--HHHHHHHHHhcCCceEEEEecC
Confidence 4655666544 433 467899999 899999988753
No 399
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=22.19 E-value=1e+02 Score=26.29 Aligned_cols=33 Identities=18% Similarity=0.109 Sum_probs=25.2
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|+++++.++.| =-..+|++|+++|++|+++.-
T Consensus 5 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 37 (260)
T 2qq5_A 5 GQVCVVTGASRG---IGRGIALQLCKAGATVYITGR 37 (260)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 467888877643 345789999999999988754
No 400
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=22.18 E-value=79 Score=27.20 Aligned_cols=33 Identities=15% Similarity=0.108 Sum_probs=27.4
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEe
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIH 49 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (458)
+.|++++|.++.| =-..+|+.|+++|.+|.+..
T Consensus 8 ~gKvalVTGas~G---IG~aia~~la~~Ga~Vvi~~ 40 (255)
T 4g81_D 8 TGKTALVTGSARG---LGFAYAEGLAAAGARVILND 40 (255)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEECC
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEE
Confidence 5699999999875 34678999999999987764
No 401
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=22.17 E-value=1.4e+02 Score=24.92 Aligned_cols=33 Identities=27% Similarity=0.175 Sum_probs=24.4
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|.++++.++ |-+ -..++++|+++||+|+++..
T Consensus 7 ~~~vlVtGas-ggi--G~~la~~l~~~G~~V~~~~r 39 (248)
T 2pnf_A 7 GKVSLVTGST-RGI--GRAIAEKLASAGSTVIITGT 39 (248)
T ss_dssp TCEEEETTCS-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-chH--HHHHHHHHHHCCCEEEEEeC
Confidence 3567777665 433 45689999999999988765
No 402
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=22.17 E-value=2e+02 Score=25.82 Aligned_cols=79 Identities=13% Similarity=0.061 Sum_probs=45.8
Q ss_pred CCcEEEEEcCcccc-CCHHHHHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChhhhhcCC
Q 012678 270 AKSVMYVSFGSIVV-VNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHP 348 (458)
Q Consensus 270 ~~~~i~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~~ll~~~ 348 (458)
++.+-+||..+... .....++..++.|++.|.+++. +...... ...+...-.+|.. ..++.+..+
T Consensus 12 GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~--~~~~~~~---~~~~ag~d~~Ra~---------dL~~a~~Dp 77 (331)
T 4e5s_A 12 GDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTF--STHAEEI---DRFASSSISSRVQ---------DLHEAFRDP 77 (331)
T ss_dssp TCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEE--CTTTTCC---CTTSSCCHHHHHH---------HHHHHHHCT
T ss_pred cCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEE--CCchhcc---cCccCCCHHHHHH---------HHHHHhhCC
Confidence 56788888877554 3466777888889888887653 3322111 1112222222211 235567778
Q ss_pred Ccccccc-ccCchhH
Q 012678 349 AVGGFWT-HNGWNST 362 (458)
Q Consensus 349 ~~~~~I~-HgG~~s~ 362 (458)
++++++| -||+|+.
T Consensus 78 ~i~aI~~~rGG~g~~ 92 (331)
T 4e5s_A 78 NVKAILTTLGGYNSN 92 (331)
T ss_dssp TEEEEEESCCCSCGG
T ss_pred CCCEEEEccccccHH
Confidence 8777766 6777764
No 403
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=22.14 E-value=96 Score=26.17 Aligned_cols=33 Identities=6% Similarity=0.034 Sum_probs=24.4
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|.++++.++. - =-..+|+.|+++|++|+++.-
T Consensus 5 ~k~vlVTGas~-g--iG~~ia~~l~~~G~~V~~~~r 37 (245)
T 1uls_A 5 DKAVLITGAAH-G--IGRATLELFAKEGARLVACDI 37 (245)
T ss_dssp TCEEEEESTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 35677776663 2 345789999999999998764
No 404
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=22.08 E-value=2.6e+02 Score=25.16 Aligned_cols=90 Identities=12% Similarity=0.075 Sum_probs=49.3
Q ss_pred cEEEEEcCccccCCHHHHHHHHHHHHhC-CCceEEEEcCCCCCCCcccCCCchhHHHhhcCCc-ceeeccChhhhhcCCC
Q 012678 272 SVMYVSFGSIVVVNVTEFLEIAWGLANS-RVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRG-HIVKWAPQQEVLAHPA 349 (458)
Q Consensus 272 ~~i~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~ipq~~ll~~~~ 349 (458)
.+.+|.+|.+.. ...+.++.+. +..++.++..+. +.. +.+.... ...-+-...++|..++
T Consensus 7 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~~-----------~~~-~~~a~~~~~~~~~~~~~~ll~~~~ 68 (359)
T 3m2t_A 7 KVGLVGIGAQMQ------ENLLPSLLQMQDIRIVAACDSDL-----------ERA-RRVHRFISDIPVLDNVPAMLNQVP 68 (359)
T ss_dssp EEEEECCSHHHH------HTHHHHHHTCTTEEEEEEECSSH-----------HHH-GGGGGTSCSCCEESSHHHHHHHSC
T ss_pred eEEEECCCHHHH------HHHHHHHHhCCCcEEEEEEcCCH-----------HHH-HHHHHhcCCCcccCCHHHHhcCCC
Confidence 477888887552 2345566655 455555554321 111 1111111 1123445677888776
Q ss_pred ccccccccCch----hHHHHHhhCCcccc-ccccc
Q 012678 350 VGGFWTHNGWN----STLESICEGVPMIC-QPCFG 379 (458)
Q Consensus 350 ~~~~I~HgG~~----s~~eal~~GvP~l~-~P~~~ 379 (458)
+.+++-.-... -+.+|+.+|+++++ -|+..
T Consensus 69 vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~ 103 (359)
T 3m2t_A 69 LDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCA 103 (359)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHTTCEEEECSCSCS
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCCCeEEEECCCcC
Confidence 65577655433 36778889998876 36543
No 405
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=22.08 E-value=99 Score=26.79 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=27.4
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|+.|+++|++|+++.-
T Consensus 10 ~~k~~lVTGas~g---IG~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 10 EGKVAFVTGAARG---QGRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEec
Confidence 4588999988853 356899999999999988754
No 406
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=22.07 E-value=1e+02 Score=26.65 Aligned_cols=34 Identities=24% Similarity=0.129 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|.++.-
T Consensus 10 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 43 (281)
T 3svt_A 10 QDRTYLVTGGGSG---IGKGVAAGLVAAGASVMIVGR 43 (281)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578888887743 245789999999999988764
No 407
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=22.05 E-value=92 Score=26.31 Aligned_cols=32 Identities=16% Similarity=0.088 Sum_probs=24.8
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 16 RVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
|+++++.++.| =-..+|+.|+++|++|+++.-
T Consensus 3 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (247)
T 3dii_A 3 RGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDI 34 (247)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 67778877643 346789999999999988764
No 408
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=22.04 E-value=46 Score=28.87 Aligned_cols=40 Identities=8% Similarity=-0.047 Sum_probs=35.0
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHH--------HHhC-CCEEEEEeCC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASI--------LYSK-GFSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~--------L~~r-Gh~Vt~~~~~ 51 (458)
.++.||++.+.++-.|-....-++.- |..+ |++|+.+...
T Consensus 118 ~~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~ 166 (262)
T 1xrs_B 118 GRKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQ 166 (262)
T ss_dssp CSCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSS
T ss_pred CCCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCC
Confidence 35779999999999999999999977 9999 9999998764
No 409
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=22.03 E-value=2.3e+02 Score=24.92 Aligned_cols=111 Identities=12% Similarity=0.046 Sum_probs=0.0
Q ss_pred cccCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC-CCCCCCCCCCCceEEecCCCCCCCccCcccHHHHHH
Q 012678 9 VQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN-FNSPNPSNYPHFSFNSISESLWESEVSTENAISLLT 87 (458)
Q Consensus 9 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (458)
....+++||+++.++. ||-.-.+--+..--+-..+|..+.+. ......+...|+.+..+|.....
T Consensus 90 ~~~~~~~ri~vl~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~~~~~~~~~~------------- 155 (292)
T 3lou_A 90 HDVAARPKVLIMVSKL-EHCLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQHGLPFRHFPITADT------------- 155 (292)
T ss_dssp EETTSCCEEEEEECSC-CHHHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHTTCCEEECCCCSSC-------------
T ss_pred eccCCCCEEEEEEcCC-CcCHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHcCCCEEEeCCCcCC-------------
Q ss_pred HHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCch-hhHHHHHHHcCCCeEEEecc
Q 012678 88 VLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 88 ~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 143 (458)
.......+.+.+++ .+||+||.-.+. .-...+-..+.-.++-++++
T Consensus 156 --r~~~~~~~~~~l~~--------~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 202 (292)
T 3lou_A 156 --KAQQEAQWLDVFET--------SGAELVILARYMQVLSPEASARLANRAINIHHS 202 (292)
T ss_dssp --HHHHHHHHHHHHHH--------HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred --HHHHHHHHHHHHHH--------hCCCEEEecCchhhCCHHHHhhhcCCeEEeCCC
No 410
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=21.98 E-value=1.1e+02 Score=26.84 Aligned_cols=34 Identities=21% Similarity=0.163 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|+.|+++|++|.++..
T Consensus 27 ~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 60 (299)
T 3t7c_A 27 EGKVAFITGAARG---QGRSHAITLAREGADIIAIDV 60 (299)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEec
Confidence 4588999988753 346889999999999988765
No 411
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=21.90 E-value=59 Score=30.83 Aligned_cols=31 Identities=19% Similarity=0.232 Sum_probs=24.6
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
|||.++-.|..| ..+|..|+++||+|+++..
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~ 33 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDT 33 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEEC
Confidence 799988554433 6789999999999998854
No 412
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=21.88 E-value=1.2e+02 Score=25.86 Aligned_cols=34 Identities=12% Similarity=0.168 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|+++.-
T Consensus 9 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 42 (262)
T 3pk0_A 9 QGRSVVVTGGTKG---IGRGIATVFARAGANVAVAGR 42 (262)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578888887743 245789999999999988764
No 413
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=21.85 E-value=98 Score=26.15 Aligned_cols=34 Identities=12% Similarity=0.008 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++. - --..+|++|+++|++|+++..
T Consensus 8 ~~k~vlITGas~-g--iG~~~a~~l~~~G~~V~~~~r 41 (253)
T 3qiv_A 8 ENKVGIVTGSGG-G--IGQAYAEALAREGAAVVVADI 41 (253)
T ss_dssp TTCEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCC-h--HHHHHHHHHHHCCCEEEEEcC
Confidence 457888888764 2 346889999999999888754
No 414
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=21.84 E-value=1.2e+02 Score=26.36 Aligned_cols=34 Identities=12% Similarity=0.094 Sum_probs=25.7
Q ss_pred CEEEEEcCCCC-cCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQ-GHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|+++++.++. |-+ -..+|+.|+++|++|+++.-
T Consensus 21 ~k~vlVTGas~~~gI--G~~ia~~l~~~G~~V~~~~r 55 (285)
T 2p91_A 21 GKRALITGVANERSI--AYGIAKSFHREGAQLAFTYA 55 (285)
T ss_dssp TCEEEECCCSSTTSH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCCCcH--HHHHHHHHHHcCCEEEEEeC
Confidence 46788887762 444 35789999999999988765
No 415
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=21.84 E-value=55 Score=29.82 Aligned_cols=38 Identities=8% Similarity=0.065 Sum_probs=26.9
Q ss_pred CCCEEEEEcCCCCc-C---HHHHHHHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQG-H---INPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~G-H---~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
++.||+++..|..+ | +.....++++|.+.||+|+.+..
T Consensus 2 ~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i 43 (357)
T 4fu0_A 2 QNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGI 43 (357)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEE
Confidence 45588888554332 3 34566789999999999998753
No 416
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=21.80 E-value=88 Score=26.72 Aligned_cols=36 Identities=8% Similarity=0.043 Sum_probs=26.5
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|++++|..+.+. -=-..+|+.|+++|++|.+..-
T Consensus 5 ~gK~alVTGaa~~~-GIG~aiA~~la~~Ga~Vvi~~r 40 (256)
T 4fs3_A 5 ENKTYVIMGIANKR-SIAFGVAKVLDQLGAKLVFTYR 40 (256)
T ss_dssp TTCEEEEECCCSTT-CHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCCc-hHHHHHHHHHHHCCCEEEEEEC
Confidence 46889999854211 1247899999999999988764
No 417
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=21.80 E-value=53 Score=31.63 Aligned_cols=36 Identities=11% Similarity=0.256 Sum_probs=27.3
Q ss_pred cCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
..+|.||+++=.+.- -+.+|+.|.++|++||++...
T Consensus 39 ~~~KprVVIIGgG~A-----Gl~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 39 HSDKPNVLILGSGWG-----AISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SCSSCEEEEECSSHH-----HHHHHHHSCTTTCEEEEEESS
T ss_pred CCCCCCEEEECCcHH-----HHHHHHHhhhCCCcEEEECCC
Confidence 345679988865532 367899999999999999764
No 418
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=21.80 E-value=99 Score=27.16 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|.++.-
T Consensus 30 ~gk~vlVTGas~g---IG~~la~~l~~~G~~V~~~~r 63 (301)
T 3tjr_A 30 DGRAAVVTGGASG---IGLATATEFARRGARLVLSDV 63 (301)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 4578888877742 346789999999999888764
No 419
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=21.79 E-value=47 Score=29.90 Aligned_cols=35 Identities=11% Similarity=0.067 Sum_probs=24.1
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
..|+|++. . +.|.+- ..|++.|.++||+|+.+.-.
T Consensus 24 ~~~~vlVt-G-atG~iG--~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLIT-G-VAGFIG--SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp SCCEEEEE-T-TTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEE-C-CCcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 34565544 3 335543 57899999999999998763
No 420
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=21.77 E-value=1.3e+02 Score=25.55 Aligned_cols=36 Identities=14% Similarity=0.014 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++ |---=-..+|++|+++|++|+++..
T Consensus 6 ~~k~vlVTGas-g~~GIG~~ia~~l~~~G~~V~~~~r 41 (266)
T 3oig_A 6 EGRNIVVMGVA-NKRSIAWGIARSLHEAGARLIFTYA 41 (266)
T ss_dssp TTCEEEEECCC-STTSHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEcCC-CCCcHHHHHHHHHHHCCCEEEEecC
Confidence 45778888876 2101245789999999999988754
No 421
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=21.77 E-value=1e+02 Score=26.48 Aligned_cols=34 Identities=18% Similarity=0.129 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| --..+|++|+++|++|.++..
T Consensus 27 ~~k~vlVTGas~g---IG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 27 TDRIALVTGASRG---IGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578899888743 346789999999999988765
No 422
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=21.74 E-value=5.4e+02 Score=24.68 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
..|++++. .-.-.+.|++.|.+.|-+|..+...
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~ 392 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSH 392 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeC
Confidence 34788773 3445678888888899999887764
No 423
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=21.74 E-value=1.2e+02 Score=25.54 Aligned_cols=33 Identities=9% Similarity=0.036 Sum_probs=24.7
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|.++++.++ |- --..++++|+++|++|+++.-
T Consensus 11 ~k~vlITGas-gg--iG~~la~~l~~~G~~V~~~~r 43 (254)
T 2wsb_A 11 GACAAVTGAG-SG--IGLEICRAFAASGARLILIDR 43 (254)
T ss_dssp TCEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-cH--HHHHHHHHHHHCCCEEEEEeC
Confidence 4667777665 33 346889999999999988765
No 424
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=21.62 E-value=1.4e+02 Score=25.42 Aligned_cols=33 Identities=9% Similarity=0.069 Sum_probs=25.0
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|+++++.++. -+ -..+|+.|+++|++|+++.-
T Consensus 7 ~k~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r 39 (260)
T 2z1n_A 7 GKLAVVTAGSS-GL--GFASALELARNGARLLLFSR 39 (260)
T ss_dssp TCEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCc-hH--HHHHHHHHHHCCCEEEEEeC
Confidence 46778887663 22 46899999999999988754
No 425
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=21.57 E-value=99 Score=26.71 Aligned_cols=34 Identities=12% Similarity=-0.050 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|+++..
T Consensus 30 ~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 63 (273)
T 3uf0_A 30 AGRTAVVTGAGSG---IGRAIAHGYARAGAHVLAWGR 63 (273)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEcC
Confidence 4578888888753 346899999999999988763
No 426
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=21.56 E-value=1.4e+02 Score=25.35 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=25.1
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|.++++.++ |-+ -..+|+.|+++|++|+++.-
T Consensus 14 ~k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 46 (260)
T 2zat_A 14 NKVALVTAST-DGI--GLAIARRLAQDGAHVVVSSR 46 (260)
T ss_dssp TCEEEESSCS-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEeC
Confidence 3677888766 323 46789999999999988764
No 427
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=21.54 E-value=41 Score=23.21 Aligned_cols=56 Identities=13% Similarity=-0.042 Sum_probs=31.8
Q ss_pred HHHHHHHHHhCCCceEEEEcCCCCCCCcccCCCchhHHHhhcCCcceeeccChh-hhhcCCCccccccccCchhH
Q 012678 289 FLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQ-EVLAHPAVGGFWTHNGWNST 362 (458)
Q Consensus 289 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ipq~-~ll~~~~~~~~I~HgG~~s~ 362 (458)
+..+++.....+.+.++++.+... ++..+ .+..|+.+. .++..... --.|||.|.|
T Consensus 21 l~~fl~~a~~~g~~~v~IIHGkG~-----------GvLr~-----~V~~~L~~~~~V~~f~~a--~~~~GG~Gat 77 (83)
T 2zqe_A 21 VDQALEEARALGLSTLRLLHGKGT-----------GALRQ-----AIREALRRDKRVESFADA--PPGEGGHGVT 77 (83)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSTT-----------SHHHH-----HHHHHHHHCTTEEEEEEC--CTTTTGGGEE
T ss_pred HHHHHHHHHHCCCCEEEEEECCCc-----------hHHHH-----HHHHHHhcCCceeEEEEc--CcccCCCEEE
Confidence 444444444467888888877541 12211 244666643 35555555 6678988754
No 428
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=21.52 E-value=1.2e+02 Score=26.06 Aligned_cols=34 Identities=18% Similarity=0.201 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|+++.-
T Consensus 26 ~~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r 59 (277)
T 4fc7_A 26 RDKVAFITGGGSG---IGFRIAEIFMRHGCHTVIASR 59 (277)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEES
T ss_pred CCCEEEEeCCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578889888742 346789999999999988765
No 429
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=21.50 E-value=3.3e+02 Score=22.14 Aligned_cols=37 Identities=19% Similarity=0.223 Sum_probs=30.8
Q ss_pred CCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
..++|+.+++..- .|..+.--.-|.++|++|.-+++.
T Consensus 7 ~~~l~~avVCaSN---~NRSMEaH~~L~k~G~~V~SfGTG 43 (198)
T 3p9y_A 7 PSKLAVAVVDSSN---MNRSMEAHNFLAKKGFNVRSYGTG 43 (198)
T ss_dssp TTCCEEEEEESSS---SSHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCCceEEEEcCCC---CcccHHHHHHHHhCCCceeecCCC
Confidence 5678999999754 567777788899999999999886
No 430
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=21.50 E-value=2.1e+02 Score=22.91 Aligned_cols=37 Identities=8% Similarity=0.214 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012678 421 QEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 457 (458)
Q Consensus 421 ~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (458)
...|+.....+.++++-+....-....++++++.+.+
T Consensus 88 ~~Lr~ql~akr~EL~aL~~a~~~DeakI~aL~~Ei~~ 124 (175)
T 3lay_A 88 SALRQQLISKRYEYNALLTASSPDTAKINAVAKEMES 124 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence 3445555555555555554555566666666666653
No 431
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=21.43 E-value=1.1e+02 Score=26.55 Aligned_cols=34 Identities=18% Similarity=0.091 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|+.|+++|++|+++.-
T Consensus 32 ~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 65 (275)
T 4imr_A 32 RGRTALVTGSSRG---IGAAIAEGLAGAGAHVILHGV 65 (275)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEcC
Confidence 4588999988743 346789999999999988765
No 432
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=21.43 E-value=1.2e+02 Score=25.56 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=25.4
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|.++++.++.| =-..+|++|+++|++|+++..
T Consensus 4 ~k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 4 TKSALVTGASRG---IGRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp SCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 367888877642 346789999999999988765
No 433
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=21.35 E-value=1.2e+02 Score=25.75 Aligned_cols=33 Identities=12% Similarity=0.027 Sum_probs=24.5
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|.++++.++. -+ -..+++.|+++|++|+++.-
T Consensus 7 ~k~vlITGasg-gi--G~~la~~l~~~G~~V~~~~r 39 (264)
T 2pd6_A 7 SALALVTGAGS-GI--GRAVSVRLAGEGATVAACDL 39 (264)
T ss_dssp TCEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC-hH--HHHHHHHHHHCCCEEEEEeC
Confidence 35677776663 23 46789999999999988864
No 434
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=21.33 E-value=76 Score=25.63 Aligned_cols=40 Identities=8% Similarity=-0.116 Sum_probs=21.8
Q ss_pred ccCCCCEEEEEcCCCCcCHHHHHHHHHHHH-hCCCEEEEEe
Q 012678 10 QQKKGRRVILFPLPLQGHINPMLQLASILY-SKGFSITIIH 49 (458)
Q Consensus 10 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~-~rGh~Vt~~~ 49 (458)
....+|||||+|.+-..==--.-.|.+.+. ..|.++.+.+
T Consensus 30 m~~~~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~~~~v~S 70 (180)
T 4egs_A 30 MGRGSMRVLFVCTGNTCRSPMAEGIFNAKSKALGKDWEAKS 70 (180)
T ss_dssp ----CCEEEEEESSSSSHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCCCeEEEEEeCCCcccCHHHHHHHHHHHHhcCCceEEEE
Confidence 345689999999997543333334555553 3465554443
No 435
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=21.31 E-value=1.1e+02 Score=26.59 Aligned_cols=33 Identities=18% Similarity=0.125 Sum_probs=25.7
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|+++++.++.| =-..+|+.|+++|++|+++..
T Consensus 29 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 61 (283)
T 1g0o_A 29 GKVALVTGAGRG---IGREMAMELGRRGCKVIVNYA 61 (283)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 478888877642 346799999999999988765
No 436
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=21.28 E-value=29 Score=26.64 Aligned_cols=48 Identities=6% Similarity=0.091 Sum_probs=30.2
Q ss_pred hCCcccccccccchhhHHHHHHHHHh-cceecCCcccHHHHHHHHHHHhcc
Q 012678 368 EGVPMICQPCFGDQLVNARYVSHVWR-VGLHLERKFERREIETAIRRVTVE 417 (458)
Q Consensus 368 ~GvP~l~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~l~~~i~~ll~~ 417 (458)
..+|+|++--..+. .......+ .| +--.+.+.++.++|..+|+.++..
T Consensus 78 ~~~~ii~ls~~~~~-~~~~~~~~-~g~~~~~l~kP~~~~~L~~~i~~~~~~ 126 (154)
T 2rjn_A 78 PDIERVVISGYADA-QATIDAVN-RGKISRFLLKPWEDEDVFKVVEKGLQL 126 (154)
T ss_dssp TTSEEEEEECGGGH-HHHHHHHH-TTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCCH-HHHHHHHh-ccchheeeeCCCCHHHHHHHHHHHHHH
Confidence 36788777544442 23333333 25 433444458999999999999976
No 437
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=21.25 E-value=47 Score=28.56 Aligned_cols=29 Identities=28% Similarity=0.217 Sum_probs=21.8
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEE
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITII 48 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 48 (458)
|||.|+-.|..| ..+|+.|++.||+|++.
T Consensus 1 M~I~iIG~G~mG-----~~la~~l~~~g~~V~~~ 29 (264)
T 1i36_A 1 LRVGFIGFGEVA-----QTLASRLRSRGVEVVTS 29 (264)
T ss_dssp CEEEEESCSHHH-----HHHHHHHHHTTCEEEEC
T ss_pred CeEEEEechHHH-----HHHHHHHHHCCCeEEEe
Confidence 688888554444 35789999999998884
No 438
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=21.23 E-value=1.2e+02 Score=25.99 Aligned_cols=36 Identities=8% Similarity=-0.020 Sum_probs=29.0
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
=+.|++++|.++.| =-..+|+.|++.|.+|.++.-.
T Consensus 5 L~gKvalVTGas~G---IG~aia~~la~~Ga~Vv~~~r~ 40 (258)
T 4gkb_A 5 LQDKVVIVTGGASG---IGGAISMRLAEERAIPVVFARH 40 (258)
T ss_dssp CTTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEECC
Confidence 35689999999875 2367899999999999888653
No 439
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=21.22 E-value=1.5e+02 Score=24.69 Aligned_cols=35 Identities=20% Similarity=0.279 Sum_probs=25.3
Q ss_pred CCC-EEEEEcCCCCcC----HHHHHHHHHHHHhCCCEEEE
Q 012678 13 KGR-RVILFPLPLQGH----INPMLQLASILYSKGFSITI 47 (458)
Q Consensus 13 ~~~-~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~ 47 (458)
++| +|.+++....+. ..-...|++.|+++|+.|+.
T Consensus 11 ~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVs 50 (215)
T 2a33_A 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVY 50 (215)
T ss_dssp CSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEE
Confidence 445 588987776653 34567888999999988754
No 440
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=21.21 E-value=1.3e+02 Score=26.69 Aligned_cols=34 Identities=15% Similarity=0.089 Sum_probs=26.6
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|+++.-
T Consensus 26 ~gk~vlVTGas~G---IG~aia~~la~~G~~Vv~~~r 59 (322)
T 3qlj_A 26 DGRVVIVTGAGGG---IGRAHALAFAAEGARVVVNDI 59 (322)
T ss_dssp TTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4588999988742 346789999999999988754
No 441
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=21.18 E-value=1.1e+02 Score=27.14 Aligned_cols=34 Identities=15% Similarity=0.199 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|.++++.++. -+ -..+|+.|+++|++|.++.-
T Consensus 7 ~~k~vlVTGas~-gI--G~~la~~l~~~G~~Vv~~~r 40 (319)
T 3ioy_A 7 AGRTAFVTGGAN-GV--GIGLVRQLLNQGCKVAIADI 40 (319)
T ss_dssp TTCEEEEETTTS-TH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEcCCch-HH--HHHHHHHHHHCCCEEEEEEC
Confidence 346788888773 33 45789999999999888765
No 442
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=21.17 E-value=1e+02 Score=29.15 Aligned_cols=91 Identities=16% Similarity=0.119 Sum_probs=48.1
Q ss_pred cchhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEEE-EcCCCCCCCcccCCCchhHHHhhcCCcceeecc
Q 012678 261 CISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWV-VRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWA 339 (458)
Q Consensus 261 ~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i 339 (458)
+.+++...+.+.+++|+-++... ...+.+.+.|++.+..+.+. +.++. -.+.+.+ ..+.+
T Consensus 82 l~~~l~~~g~~rvlIVtd~~~~~---~~~~~v~~~L~~~gi~~~~~~~~ge~---------~~~~v~~-------~~~~~ 142 (450)
T 1ta9_A 82 SYMYVKKWATKSAVVLADQNVWN---ICANKIVDSLSQNGMTVTKLVFGGEA---------SLVELDK-------LRKQC 142 (450)
T ss_dssp HHHHHTTTCSSEEEEEEEHHHHH---HTHHHHHHHHHHTTCEEEEEEECSCC---------CHHHHHH-------HHTTS
T ss_pred HHHHHHhcCCCEEEEEECccHHH---HHHHHHHHHHHHCCCeEEEEeeCCCC---------CHHHHHH-------HHHHH
Confidence 33445443333566665433221 34666778888777665322 22211 1123321 11211
Q ss_pred ChhhhhcCCCccccccccCchhHHHH-----HhhCCcccccccc
Q 012678 340 PQQEVLAHPAVGGFWTHNGWNSTLES-----ICEGVPMICQPCF 378 (458)
Q Consensus 340 pq~~ll~~~~~~~~I~HgG~~s~~ea-----l~~GvP~l~~P~~ 378 (458)
-. ++++ +|-=|| ||+..+ ...|+|++.+|..
T Consensus 143 ~~-----~~D~--IIAvGG-GSviD~AK~iA~~~giP~I~IPTT 178 (450)
T 1ta9_A 143 PD-----DTQV--IIGVGG-GKTMDSAKYIAHSMNLPSIICPTT 178 (450)
T ss_dssp CT-----TCCE--EEEEES-HHHHHHHHHHHHHTTCCEEEEESS
T ss_pred hh-----CCCE--EEEeCC-cHHHHHHHHHHHhcCCCEEEEeCC
Confidence 11 4566 888777 455443 4469999999986
No 443
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=21.16 E-value=2.2e+02 Score=25.22 Aligned_cols=111 Identities=11% Similarity=0.099 Sum_probs=0.0
Q ss_pred cccCCCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC-CCCCCCCCCCCceEEecCCCCCCCccCcccHHHHHH
Q 012678 9 VQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN-FNSPNPSNYPHFSFNSISESLWESEVSTENAISLLT 87 (458)
Q Consensus 9 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (458)
....+++||+++.++. ||-.-.+--+..--+-+.+|..+.+. ......+...|+.+..+|..
T Consensus 100 ~~~~~~~ri~vl~Sg~-g~nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~gIp~~~~~~~---------------- 162 (302)
T 3o1l_A 100 TDSAQKKRVVLMASRE-SHCLADLLHRWHSDELDCDIACVISNHQDLRSMVEWHDIPYYHVPVD---------------- 162 (302)
T ss_dssp EETTSCCEEEEEECSC-CHHHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTTTCCEEECCCC----------------
T ss_pred cccCCCcEEEEEEeCC-chhHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHcCCCEEEcCCC----------------
Q ss_pred HHHHhcChhHHHHHHHHhhCCCCCCCeeEEEecCch-hhHHHHHHHcCCCeEEEecc
Q 012678 88 VLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 88 ~~~~~~~~~l~~~l~~l~~~~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 143 (458)
........+.+.++++. .+||+||.-.+. .-...+-..+.-.++-+.++
T Consensus 163 ---~~~r~~~~~~~~~~l~~----~~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 163 ---PKDKEPAFAEVSRLVGH----HQADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp ---SSCCHHHHHHHHHHHHH----TTCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred ---cCCHHHHHHHHHHHHHH----hCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
No 444
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=21.15 E-value=62 Score=29.87 Aligned_cols=44 Identities=5% Similarity=0.005 Sum_probs=30.2
Q ss_pred ccccCCCCEEEEEcCCCCcC----HHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 8 NVQQKKGRRVILFPLPLQGH----INPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 8 ~~~~~~~~~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
....+.+|||+++..+..+- +.....+++.|.+.||+|+.+...
T Consensus 31 ~~~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 78 (383)
T 3k3p_A 31 GRGSMSKETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFIT 78 (383)
T ss_dssp ------CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred ccccccCCeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEEEEec
Confidence 34445688999998775443 456788889998889999998764
No 445
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=21.12 E-value=1.2e+02 Score=25.84 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=24.9
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|+++++.++. -+ -..+|++|+++|++|+++.-
T Consensus 7 ~k~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r 39 (263)
T 3ai3_A 7 GKVAVITGSSS-GI--GLAIAEGFAKEGAHIVLVAR 39 (263)
T ss_dssp TCEEEEESCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCc-hH--HHHHHHHHHHCCCEEEEEcC
Confidence 46777877663 23 46789999999999988764
No 446
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=21.03 E-value=93 Score=26.99 Aligned_cols=37 Identities=8% Similarity=-0.079 Sum_probs=24.4
Q ss_pred HHHHHhhCCCCCCCeeEEEecCch--hhHHHHHHHcCCCeEEEe
Q 012678 100 CLAKLISNGDQEEPVTCLITDAIW--HFAQTVADTLRLPRIVLR 141 (458)
Q Consensus 100 ~l~~l~~~~~~~~~pDlvI~D~~~--~~~~~~A~~lgiP~v~~~ 141 (458)
-++++++ .+||+||..... ......-+..|||++.+.
T Consensus 51 n~E~i~~-----l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (283)
T 2r79_A 51 AAEGVLA-----LRPDILIGTEEMGPPPVLKQLEGAGVRVETLS 89 (283)
T ss_dssp CHHHHHT-----TCCSEEEECTTCCCHHHHHHHHHTTCCEEECC
T ss_pred CHHHHHh-----cCCCEEEEeCccCcHHHHHHHHHcCCcEEEec
Confidence 3556665 689999986532 223344566899998864
No 447
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=21.02 E-value=1e+02 Score=26.83 Aligned_cols=35 Identities=14% Similarity=0.207 Sum_probs=26.5
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+.|+++++.++.| + -..+|++|+++|++|+++.-.
T Consensus 15 ~gk~vlVTGas~g-I--G~~~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 15 AQRTVVITGANSG-L--GAVTARELARRGATVIMAVRD 49 (291)
T ss_dssp TTCEEEEECCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCh-H--HHHHHHHHHHCCCEEEEEECC
Confidence 4577888877642 2 368999999999999888653
No 448
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=20.95 E-value=1.5e+02 Score=25.25 Aligned_cols=37 Identities=16% Similarity=0.107 Sum_probs=26.9
Q ss_pred CCCCEEEEEcCCC-CcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 12 KKGRRVILFPLPL-QGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 12 ~~~~~il~~~~~~-~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
..+.|.++++.++ .|-+ -..+|++|+++|++|.++.-
T Consensus 11 ~~~~k~vlITGa~~~~gi--G~~ia~~l~~~G~~V~~~~r 48 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSI--AYGIAKACKREGAELAFTYV 48 (271)
T ss_dssp TTTTCEEEECCCCSTTSH--HHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEeCCCCCCcH--HHHHHHHHHHcCCCEEEEec
Confidence 3356777888765 1333 36789999999999988765
No 449
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=20.94 E-value=1e+02 Score=26.03 Aligned_cols=33 Identities=18% Similarity=0.114 Sum_probs=24.4
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|.++++.++ |- --..++++|+++|++|+++..
T Consensus 13 ~k~vlItGas-gg--iG~~la~~l~~~G~~V~~~~r 45 (260)
T 3awd_A 13 NRVAIVTGGA-QN--IGLACVTALAEAGARVIIADL 45 (260)
T ss_dssp TCEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCC-ch--HHHHHHHHHHHCCCEEEEEeC
Confidence 3567777665 32 346799999999999988865
No 450
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=20.86 E-value=66 Score=29.36 Aligned_cols=39 Identities=8% Similarity=0.062 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCCCcCH----HHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQGHI----NPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~----~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+|||+++..|-.+-- .....++++|.+.||+|+.+...
T Consensus 2 ~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 2 AKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 4789999888755443 44558889998899999998753
No 451
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=20.85 E-value=2.1e+02 Score=24.82 Aligned_cols=32 Identities=19% Similarity=0.423 Sum_probs=21.6
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
|||++ +.+ .|.+- ..|+++|.++||+|+.+..
T Consensus 1 m~vlV-tGa-tG~iG--~~l~~~L~~~g~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVV-TGG-AGFIG--SHLVDKLVELGYEVVVVDN 32 (312)
T ss_dssp CEEEE-ETT-TSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CEEEE-ECC-CChHH--HHHHHHHHhCCCEEEEEeC
Confidence 45443 333 35443 4689999999999998864
No 452
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=20.81 E-value=82 Score=27.74 Aligned_cols=31 Identities=32% Similarity=0.321 Sum_probs=24.6
Q ss_pred CeeEEE-ecCch-hhHHHHHHHcCCCeEEEecc
Q 012678 113 PVTCLI-TDAIW-HFAQTVADTLRLPRIVLRTS 143 (458)
Q Consensus 113 ~pDlvI-~D~~~-~~~~~~A~~lgiP~v~~~~~ 143 (458)
.||+|| .|... .-++.=|.++|||.|.+.-+
T Consensus 118 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDT 150 (295)
T 2zkq_b 118 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNT 150 (295)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHHTCCEEEEECT
T ss_pred CCCeEEEeCCCcchhHHHHHHHhCCCEEEEecC
Confidence 588886 66644 66788899999999998766
No 453
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=20.78 E-value=1e+02 Score=26.66 Aligned_cols=34 Identities=15% Similarity=0.169 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|.++..
T Consensus 4 ~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 37 (281)
T 3zv4_A 4 TGEVALITGGASG---LGRALVDRFVAEGARVAVLDK 37 (281)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeC
Confidence 3478888887743 346789999999999988764
No 454
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=20.73 E-value=1.1e+02 Score=25.61 Aligned_cols=33 Identities=15% Similarity=0.087 Sum_probs=24.8
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|.++++.++ |- --..+++.|+++|++|+++..
T Consensus 6 ~k~vlVtGas-gg--iG~~~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 6 GKVAIITGGT-LG--IGLAIATKFVEEGAKVMITGR 38 (251)
T ss_dssp TCEEEETTTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEeCCC-Ch--HHHHHHHHHHHCCCEEEEEeC
Confidence 3567777666 32 346799999999999988765
No 455
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=20.71 E-value=1.3e+02 Score=24.94 Aligned_cols=36 Identities=11% Similarity=0.140 Sum_probs=26.3
Q ss_pred CEEEEEcCCCCcC--HHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGH--INPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH--~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
...+++..+..|+ ..-+..+++.|.++|+.|..+--
T Consensus 27 ~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~ 64 (251)
T 2wtm_A 27 CPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADM 64 (251)
T ss_dssp EEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecC
Confidence 3455555666677 66778899999999999876643
No 456
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=20.69 E-value=1.1e+02 Score=26.13 Aligned_cols=34 Identities=18% Similarity=0.036 Sum_probs=28.3
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|++++|.++.| =-..+|+.|++.|.+|.+..-
T Consensus 8 ~GKvalVTGas~G---IG~aiA~~la~~Ga~Vvi~~r 41 (247)
T 4hp8_A 8 EGRKALVTGANTG---LGQAIAVGLAAAGAEVVCAAR 41 (247)
T ss_dssp TTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCcCCH---HHHHHHHHHHHcCCEEEEEeC
Confidence 5689999999875 347889999999999988754
No 457
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=20.68 E-value=1.1e+02 Score=26.40 Aligned_cols=33 Identities=9% Similarity=-0.056 Sum_probs=25.0
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|.++++.++.| =-..+|+.|+++|++|+++.-
T Consensus 31 ~k~vlITGasgg---IG~~la~~L~~~G~~V~~~~r 63 (272)
T 1yb1_A 31 GEIVLITGAGHG---IGRLTAYEFAKLKSKLVLWDI 63 (272)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEEc
Confidence 466777776632 346899999999999988765
No 458
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=20.67 E-value=1.1e+02 Score=26.07 Aligned_cols=33 Identities=21% Similarity=0.190 Sum_probs=25.4
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|.++++.++.| =-..+|++|+++|++|+++.-
T Consensus 21 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 53 (253)
T 2nm0_A 21 SRSVLVTGGNRG---IGLAIARAFADAGDKVAITYR 53 (253)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467788877643 346789999999999988765
No 459
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=20.67 E-value=1.2e+02 Score=25.56 Aligned_cols=43 Identities=16% Similarity=0.042 Sum_probs=29.4
Q ss_pred cchhhccCCCCcEEEEEcCccccCCHHHHHHHHHHHHhCCCceEE
Q 012678 261 CISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLW 305 (458)
Q Consensus 261 ~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 305 (458)
+.+|+.. ...+++|..|+...........+.+++++.+..++.
T Consensus 24 l~~~~~~--~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~ 66 (229)
T 1fy2_A 24 IANQLNG--RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTG 66 (229)
T ss_dssp HHHHHTT--CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHhcC--CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 4555543 567999988875444455577788999998875443
No 460
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=20.66 E-value=99 Score=26.66 Aligned_cols=34 Identities=29% Similarity=0.177 Sum_probs=26.1
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|.++..
T Consensus 25 ~gk~~lVTGas~g---IG~aia~~la~~G~~V~~~~r 58 (271)
T 4ibo_A 25 GGRTALVTGSSRG---LGRAMAEGLAVAGARILINGT 58 (271)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEECCS
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578899888743 346789999999999877643
No 461
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=20.66 E-value=96 Score=27.68 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=22.2
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+.+.++++.++ |.+- ..|+++|.++||+|+.+.-.
T Consensus 18 ~~~~vlVtGat-G~iG--~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 18 GSHMILVTGSA-GRVG--RAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp ---CEEEETTT-SHHH--HHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEECCC-ChHH--HHHHHHHHhCCCEEEEEeCC
Confidence 33334444443 5443 46789999999999998754
No 462
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=20.62 E-value=1.1e+02 Score=26.65 Aligned_cols=35 Identities=6% Similarity=0.027 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCC-cCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQ-GHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++. +-+ -..+|++|+++|++|.++.-
T Consensus 29 ~~k~vlVTGasg~~GI--G~~ia~~la~~G~~V~~~~r 64 (296)
T 3k31_A 29 EGKKGVIIGVANDKSL--AWGIAKAVCAQGAEVALTYL 64 (296)
T ss_dssp TTCEEEEECCCSTTSH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEeCCCCCCH--HHHHHHHHHHCCCEEEEEeC
Confidence 457888888763 122 35799999999999888764
No 463
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=20.60 E-value=1.4e+02 Score=26.42 Aligned_cols=34 Identities=18% Similarity=0.247 Sum_probs=23.5
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+|++. .+ .|.+ -..|+++|+++||+|+.+.-
T Consensus 19 ~~~~vlVT-Ga-sG~i--G~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 19 SHMRILIT-GG-AGCL--GSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp TCCEEEEE-TT-TSHH--HHHHHHHHGGGTCEEEEEEC
T ss_pred CCCEEEEE-CC-CCHH--HHHHHHHHHHCCCEEEEEEC
Confidence 34665544 33 3544 35789999999999999875
No 464
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=20.58 E-value=1.1e+02 Score=24.31 Aligned_cols=40 Identities=18% Similarity=0.257 Sum_probs=31.4
Q ss_pred CCCCEEEEEcCCCC---cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 12 KKGRRVILFPLPLQ---GHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 12 ~~~~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
..+-+|+++|.-+. ---.+.-.|++.|.++|.+|.|...|
T Consensus 21 ~~A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 21 KNASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp HTCSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HhCCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 34568888886543 23457889999999999999999986
No 465
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=20.57 E-value=1.2e+02 Score=25.76 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|.++++.++. -+ -..+|++|+++|++|+++..
T Consensus 7 ~~k~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r 40 (259)
T 4e6p_A 7 EGKSALITGSAR-GI--GRAFAEAYVREGATVAIADI 40 (259)
T ss_dssp TTCEEEEETCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEeC
Confidence 347788887763 22 45789999999999988754
No 466
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=20.57 E-value=87 Score=27.83 Aligned_cols=31 Identities=16% Similarity=0.235 Sum_probs=21.3
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 17 VILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 17 il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.++++.++ |-+- ..|+++|.++||+|+.+.-
T Consensus 11 ~vlVTGat-GfIG--~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 11 TACVVGGT-GFVA--SLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp EEEEECTT-SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCc-hHHH--HHHHHHHHHCCCEEEEEEc
Confidence 34555543 5443 4688999999999987654
No 467
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=20.56 E-value=1.4e+02 Score=24.96 Aligned_cols=36 Identities=6% Similarity=0.048 Sum_probs=26.1
Q ss_pred CEEEEEcCCCCcC--HHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGH--INPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH--~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
..++++..|..|+ ...+..+++.|.++|+.|..+-.
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 83 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDF 83 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEcc
Confidence 3455555555555 66688999999999999887754
No 468
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=20.55 E-value=90 Score=26.84 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|.++.-
T Consensus 27 ~gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r 60 (266)
T 3uxy_A 27 EGKVALVTGAAGG---IGGAVVTALRAAGARVAVADR 60 (266)
T ss_dssp TTCEEEESSTTSH---HHHHHHHHHHHTTCEEEECSS
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578899988753 346899999999999877643
No 469
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=20.52 E-value=1.2e+02 Score=25.52 Aligned_cols=33 Identities=15% Similarity=0.115 Sum_probs=24.9
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|+++++.++. -+ -..+|++|+++|++|+++.-
T Consensus 7 ~k~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r 39 (249)
T 2ew8_A 7 DKLAVITGGAN-GI--GRAIAERFAVEGADIAIADL 39 (249)
T ss_dssp TCEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCc-HH--HHHHHHHHHHCCCEEEEEcC
Confidence 36777887663 23 46789999999999988765
No 470
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=20.52 E-value=72 Score=27.84 Aligned_cols=30 Identities=17% Similarity=0.260 Sum_probs=22.9
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEe
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIH 49 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (458)
|||.|+-.|..|. .+|+.|.+.||+|+++.
T Consensus 4 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 7899886655553 46888999999998664
No 471
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=20.50 E-value=1.1e+02 Score=26.44 Aligned_cols=35 Identities=14% Similarity=0.169 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
+.|+++++.++.| =-..+|+.|+++|++|.++.-.
T Consensus 5 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 39 (274)
T 3e03_A 5 SGKTLFITGASRG---IGLAIALRAARDGANVAIAAKS 39 (274)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEECCCCh---HHHHHHHHHHHCCCEEEEEecc
Confidence 3478888888743 3457899999999999887653
No 472
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=20.49 E-value=98 Score=26.28 Aligned_cols=37 Identities=24% Similarity=0.301 Sum_probs=24.0
Q ss_pred CCEEEEEcCCCCcCH--HHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHI--NPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~--~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.-++++..++.+|- ..+..+|+.|+++|+.|..+-.
T Consensus 55 ~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~ 93 (259)
T 4ao6_A 55 SDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDG 93 (259)
T ss_dssp CSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECC
T ss_pred CCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeecc
Confidence 345777777776763 3478899999999999887744
No 473
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=20.46 E-value=1.2e+02 Score=27.70 Aligned_cols=33 Identities=15% Similarity=0.315 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.|+|+++-.|. .-+..|..|+++||+|+++-..
T Consensus 3 ~~~v~iiG~G~-----~Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 3 SKKILIVGAGF-----SGAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp CCEEEEECCSH-----HHHHHHHHHHTTTCEEEEEESS
T ss_pred cCCEEEECcCH-----HHHHHHHHHHHCCCcEEEEEec
Confidence 47888775543 4678899999999999999653
No 474
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=20.41 E-value=1.1e+02 Score=26.32 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|.++.-
T Consensus 10 ~~k~~lVTGas~G---IG~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 10 EGRVAFITGAARG---QGRAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCccH---HHHHHHHHHHHcCCEEEEEec
Confidence 4588889888743 246789999999999988754
No 475
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=20.40 E-value=70 Score=27.69 Aligned_cols=31 Identities=23% Similarity=0.246 Sum_probs=22.6
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
|||.|+-.|..| ..+|+.|.+.||+|+++..
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~~ 31 (279)
T 2f1k_A 1 MKIGVVGLGLIG-----ASLAGDLRRRGHYLIGVSR 31 (279)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEcCcHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 678887554433 4678889999999888743
No 476
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=20.39 E-value=1.3e+02 Score=24.23 Aligned_cols=36 Identities=17% Similarity=0.237 Sum_probs=25.8
Q ss_pred CEEEEEcCCCCcCHHHHH-HHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPML-QLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~ 50 (458)
|||+++-....|+..-+. .+++.|.+.|++|.++--
T Consensus 6 ~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 42 (200)
T 2a5l_A 6 PYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTV 42 (200)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBC
T ss_pred ceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 488877777678766544 456667778999988755
No 477
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=20.28 E-value=1.1e+02 Score=25.98 Aligned_cols=33 Identities=18% Similarity=0.264 Sum_probs=24.5
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|.++++.++.| =-..+|++|+++|++|+++.-
T Consensus 6 ~k~vlVTGas~g---iG~~ia~~l~~~G~~V~~~~r 38 (253)
T 1hxh_A 6 GKVALVTGGASG---VGLEVVKLLLGEGAKVAFSDI 38 (253)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 367778876642 345789999999999888753
No 478
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=20.28 E-value=1.6e+02 Score=24.52 Aligned_cols=36 Identities=11% Similarity=0.169 Sum_probs=25.4
Q ss_pred CCC-EEEEEcCCCCc----CHHHHHHHHHHHHhCCCEEEEE
Q 012678 13 KGR-RVILFPLPLQG----HINPMLQLASILYSKGFSITII 48 (458)
Q Consensus 13 ~~~-~il~~~~~~~G----H~~p~l~La~~L~~rGh~Vt~~ 48 (458)
++| +|.+++....+ +..-...|++.|+++|+.|+.=
T Consensus 7 ~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~G 47 (216)
T 1ydh_A 7 SRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYG 47 (216)
T ss_dssp CSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEEC
Confidence 445 58888766554 3456788888999999986443
No 479
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=20.26 E-value=1.2e+02 Score=26.00 Aligned_cols=35 Identities=14% Similarity=0.121 Sum_probs=25.5
Q ss_pred CEEEEEcCCCC-cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 15 RRVILFPLPLQ-GHINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 15 ~~il~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.|.++++.++. |-+ -..+|+.|+++|++|+++.-.
T Consensus 6 ~k~vlVTGas~~~gI--G~~~a~~l~~~G~~V~~~~r~ 41 (275)
T 2pd4_A 6 GKKGLIVGVANNKSI--AYGIAQSCFNQGATLAFTYLN 41 (275)
T ss_dssp TCEEEEECCCSTTSH--HHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEECCCCCCcH--HHHHHHHHHHCCCEEEEEeCC
Confidence 46777887651 334 357899999999999887653
No 480
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=20.25 E-value=1.3e+02 Score=25.85 Aligned_cols=33 Identities=15% Similarity=0.192 Sum_probs=25.3
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|+++++.++.| --..+|+.|+++|++|+++.-
T Consensus 6 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 38 (280)
T 1xkq_A 6 NKTVIITGSSNG---IGRTTAILFAQEGANVTITGR 38 (280)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 467888877642 345789999999999988764
No 481
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=20.22 E-value=1.4e+02 Score=25.09 Aligned_cols=33 Identities=15% Similarity=0.017 Sum_probs=24.7
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|.++++.++ |- =-..+|+.|+++|++|+++..
T Consensus 4 ~k~vlVTGas-~g--iG~~ia~~l~~~G~~V~~~~r 36 (246)
T 2uvd_A 4 GKVALVTGAS-RG--IGRAIAIDLAKQGANVVVNYA 36 (246)
T ss_dssp TCEEEETTCS-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-cH--HHHHHHHHHHHCCCEEEEEeC
Confidence 3567787666 33 346789999999999988764
No 482
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=20.21 E-value=91 Score=25.53 Aligned_cols=35 Identities=17% Similarity=0.222 Sum_probs=26.9
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEe
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIH 49 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (458)
.+.+++..+..|+..-+..+++.|.++|+.|..+-
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d 56 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPL 56 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECC
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecC
Confidence 35555666666777788999999999999876653
No 483
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=20.17 E-value=1.1e+02 Score=24.34 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCCC--c-CHHHHHHHHHHHHhCCCEEEEEeCC
Q 012678 13 KGRRVILFPLPLQ--G-HINPMLQLASILYSKGFSITIIHTN 51 (458)
Q Consensus 13 ~~~~il~~~~~~~--G-H~~p~l~La~~L~~rGh~Vt~~~~~ 51 (458)
.+-+|+++|.-+. . --.+.-.|++.|.++|.+|.|...|
T Consensus 21 ~A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 21 EANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp HCSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred hCCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 3568888886543 2 2457889999999999999999886
No 484
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=20.14 E-value=80 Score=26.86 Aligned_cols=34 Identities=15% Similarity=0.146 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.|+++++.++.| =-..+|++|+++|++|.++..
T Consensus 8 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 41 (257)
T 3tl3_A 8 RDAVAVVTGGASG---LGLATTKRLLDAGAQVVVLDI 41 (257)
T ss_dssp --CEEEEETTTSH---HHHHHHHHHHHHTCEEEEEES
T ss_pred cCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578888887743 345899999999999988865
No 485
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=20.10 E-value=63 Score=28.93 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=24.2
Q ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
+.+||.|+-.|..| ..+|..|+++||+|+++-.
T Consensus 5 ~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~ 37 (319)
T 2dpo_A 5 AAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 34688888665544 5788999999999998754
No 486
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=20.09 E-value=1.2e+02 Score=25.47 Aligned_cols=33 Identities=27% Similarity=0.243 Sum_probs=25.2
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.|+++++.++. -+ -..+|++|+++|++|.++..
T Consensus 5 ~k~vlITGas~-gI--G~~~a~~l~~~G~~v~~~~r 37 (247)
T 3lyl_A 5 EKVALVTGASR-GI--GFEVAHALASKGATVVGTAT 37 (247)
T ss_dssp TCEEEESSCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC-hH--HHHHHHHHHHCCCEEEEEeC
Confidence 46788887763 22 45889999999999988765
No 487
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=20.08 E-value=1.1e+02 Score=26.37 Aligned_cols=33 Identities=9% Similarity=0.040 Sum_probs=24.7
Q ss_pred CEEEEEcCCCCcCHHHHHHHHHHHHhCCCEEEEEeC
Q 012678 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (458)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (458)
.+.++++.++. - =-..++++|+++|++|+++.-
T Consensus 28 ~k~vlITGasg-g--IG~~la~~l~~~G~~V~~~~r 60 (286)
T 1xu9_A 28 GKKVIVTGASK-G--IGREMAYHLAKMGAHVVVTAR 60 (286)
T ss_dssp TCEEEESSCSS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCc-H--HHHHHHHHHHHCCCEEEEEEC
Confidence 46677777663 2 346789999999999888764
No 488
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=20.02 E-value=80 Score=26.59 Aligned_cols=32 Identities=13% Similarity=0.070 Sum_probs=22.2
Q ss_pred CCeeEEEecCchhh---HH----HHHHHcCCCeEEEecc
Q 012678 112 EPVTCLITDAIWHF---AQ----TVADTLRLPRIVLRTS 143 (458)
Q Consensus 112 ~~pDlvI~D~~~~~---~~----~~A~~lgiP~v~~~~~ 143 (458)
.+||+|++|..... .. .+...+++|+|.+.-.
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 47999999986533 33 3445558999987555
Done!