BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012680
(458 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255578951|ref|XP_002530328.1| signal recognition particle protein, putative [Ricinus communis]
gi|223530132|gb|EEF32044.1| signal recognition particle protein, putative [Ricinus communis]
Length = 572
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/458 (92%), Positives = 446/458 (97%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRD+RRALLEADVSLPVVRRFVQ+V+++A+GVGLIRGV+PDQQLVKIV DELVKLMGGEV
Sbjct: 115 MRDMRRALLEADVSLPVVRRFVQSVTDEAIGVGLIRGVKPDQQLVKIVHDELVKLMGGEV 174
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SELVFAK PTVILLAGLQGVGKTTV AKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL
Sbjct: 175 SELVFAKYSPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 234
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQVGVPVYT GTEVKPS+IAK+GLEEAKKKN+DVVIVDTAGRLQIDK MMDELK+VKRV
Sbjct: 235 GEQVGVPVYTEGTEVKPSEIAKRGLEEAKKKNIDVVIVDTAGRLQIDKGMMDELKEVKRV 294
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 295 LNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 354
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVM+QEDAE++QKKIMSA FDFN
Sbjct: 355 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSAKFDFN 414
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR VARMGSM+RVIGMIPGMGK+TPAQ+REAEKSLKIME+MIEAMTPEEREKPEL
Sbjct: 415 DFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQIREAEKSLKIMESMIEAMTPEEREKPEL 474
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAESP RRKR+AQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+PALSNLEDALK+
Sbjct: 475 LAESPTRRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALSNLEDALKA 534
Query: 421 EQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 458
EQKAPPGTARRKRRSESRRQF D AS+RPSPRGFG G+
Sbjct: 535 EQKAPPGTARRKRRSESRRQFADSASSRPSPRGFGSGN 572
>gi|359481606|ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Vitis vinifera]
gi|297740127|emb|CBI30309.3| unnamed protein product [Vitis vinifera]
Length = 567
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/455 (93%), Positives = 444/455 (97%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGV+PDQQLVKIV DELVKLMGGEV
Sbjct: 110 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVKPDQQLVKIVHDELVKLMGGEV 169
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SELVFAKS PTVILLAGLQGVGKTTV AKLA YLKKQGKSCMLVAGDVYRPAAIDQLVIL
Sbjct: 170 SELVFAKSGPTVILLAGLQGVGKTTVCAKLAFYLKKQGKSCMLVAGDVYRPAAIDQLVIL 229
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQV VPVYTAGTEVKPSQIAKQGLEEA+KKN+DVVIVDTAGRLQIDKAMMDELKDVKR
Sbjct: 230 GEQVDVPVYTAGTEVKPSQIAKQGLEEARKKNIDVVIVDTAGRLQIDKAMMDELKDVKRA 289
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 290 INPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 349
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVM+QEDAEE+QKKIMSA FDFN
Sbjct: 350 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFN 409
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR VARMGSM+RV+GMIPGMGK+TPAQ+REAEKSLK+ME MIEAMTPEEREKPEL
Sbjct: 410 DFLKQTRAVARMGSMTRVLGMIPGMGKVTPAQIREAEKSLKMMEGMIEAMTPEEREKPEL 469
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+PALSNLE+ LKS
Sbjct: 470 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALSNLEETLKS 529
Query: 421 EQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFG 455
EQKAPPGTARRKRRSESR+QF +PAS+RPSPRGFG
Sbjct: 530 EQKAPPGTARRKRRSESRKQFAEPASSRPSPRGFG 564
>gi|224138482|ref|XP_002322825.1| predicted protein [Populus trichocarpa]
gi|222867455|gb|EEF04586.1| predicted protein [Populus trichocarpa]
Length = 576
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/458 (89%), Positives = 438/458 (95%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFVQ+VS+QAVGVGL+RGV+PDQQLVKIV DELVKLMGGEV
Sbjct: 119 MRDIRRALLEADVSLPVVRRFVQSVSDQAVGVGLVRGVKPDQQLVKIVHDELVKLMGGEV 178
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SELVFAKS PTVILLAGLQGVGKTTV AKLANYLKKQGKSCML+AGDVYRPAAIDQLVIL
Sbjct: 179 SELVFAKSAPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLIAGDVYRPAAIDQLVIL 238
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQVGVPVYT GT+VKPS+IA++GL EAKKKN+DVVIVDTAGRLQIDK MMDELKDVK +
Sbjct: 239 GEQVGVPVYTEGTDVKPSEIARKGLSEAKKKNIDVVIVDTAGRLQIDKGMMDELKDVKLI 298
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 299 LNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 358
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
LVGRGERMEDLEPFYP+RMAGRILGMGDVLSFVEKAQEVM+QEDAEE+QKKIMSANFDFN
Sbjct: 359 LVGRGERMEDLEPFYPNRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSANFDFN 418
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR VA+MGSM+RVIGMIPGM K+TP QVREAEK+LKIMEAMIE MTPEEREKPEL
Sbjct: 419 DFLKQTRAVAKMGSMTRVIGMIPGMAKVTPGQVREAEKNLKIMEAMIEVMTPEEREKPEL 478
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAESP RRKRVAQ SGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+P+LSNLEDALK+
Sbjct: 479 LAESPERRKRVAQASGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPSLSNLEDALKT 538
Query: 421 EQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 458
+QKAPPGTARR+R++ES ++FVD S+RP P GFG +
Sbjct: 539 KQKAPPGTARRRRKTESSKRFVDSVSSRPGPHGFGSSN 576
>gi|449451269|ref|XP_004143384.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Cucumis sativus]
gi|449482550|ref|XP_004156318.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Cucumis sativus]
Length = 572
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/458 (91%), Positives = 444/458 (96%), Gaps = 1/458 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFVQAVS+QAVGVG+IRGVRPDQQLVKIV DELVKLMGGEV
Sbjct: 116 MRDIRRALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEV 175
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SELVF+KS PTVILLAGLQGVGKTTV AKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL
Sbjct: 176 SELVFSKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 235
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQVGVPVYTAGTEVKPS IAKQGL+EA+K VDVVIVDTAGRLQID+AMMDELK+VKRV
Sbjct: 236 GEQVGVPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDRAMMDELKEVKRV 295
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 296 INPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 355
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
LVGRGERM+DLEPFYPDRMAGRILGMGDVLSFVEKAQEVM+QEDAEE+QKKI+SA FDFN
Sbjct: 356 LVGRGERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFN 415
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR VARMGSM+RVIGMIPGMGK+TPAQVREAEKSLKIME+MIEAMTPEEREKPEL
Sbjct: 416 DFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEEREKPEL 475
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAESP RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+PAL+NLE+ALK+
Sbjct: 476 LAESPARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKA 535
Query: 421 EQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 458
EQKAPPGTARRKRRSESR+QF + + TR SPRGFG G+
Sbjct: 536 EQKAPPGTARRKRRSESRKQFAN-SETRSSPRGFGSGN 572
>gi|15237580|ref|NP_196014.1| signal recognition particle subunit [Arabidopsis thaliana]
gi|586038|sp|P37107.1|SR54C_ARATH RecName: Full=Signal recognition particle 54 kDa protein,
chloroplastic; Short=54 chloroplast protein; Short=54CP;
Short=SRP54; Short=cpSRP54; AltName: Full=FFC; Flags:
Precursor
gi|396701|emb|CAA79981.1| 54CP [Arabidopsis thaliana]
gi|7406404|emb|CAB85514.1| signal recognition particle 54CP protein precursor [Arabidopsis
thaliana]
gi|15293131|gb|AAK93676.1| putative signal recognition particle 54CP protein precursor
[Arabidopsis thaliana]
gi|24030445|gb|AAN41376.1| putative signal recognition particle 54CP protein precursor
[Arabidopsis thaliana]
gi|332003291|gb|AED90674.1| signal recognition particle subunit [Arabidopsis thaliana]
Length = 564
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/458 (87%), Positives = 438/458 (95%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFVQ+VS+QAVG+G+IRGV+PDQQLVKIV DELVKLMGGEV
Sbjct: 107 MRDIRRALLEADVSLPVVRRFVQSVSDQAVGMGVIRGVKPDQQLVKIVHDELVKLMGGEV 166
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SEL FAKS PTVILLAGLQGVGKTTV AKLA YLKKQGKSCML+AGDVYRPAAIDQLVIL
Sbjct: 167 SELQFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVIL 226
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQVGVPVYTAGT+VKP+ IAKQGL+EAKK NVDVVI+DTAGRLQIDK MMDELKDVK+
Sbjct: 227 GEQVGVPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELKDVKKF 286
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 287 LNPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 346
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKA EVM+QEDAE++QKKIMSA FDFN
Sbjct: 347 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQKKIMSAKFDFN 406
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR VA+MGSM+RV+GMIPGMGK++PAQ+REAEK+L +MEAMIE MTPEERE+PEL
Sbjct: 407 DFLKQTRAVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEVMTPEERERPEL 466
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAESP RRKR+A+DSGKTEQQVS LVAQ+FQMRV+MKNLMGVMEGGS+PALS LEDALK+
Sbjct: 467 LAESPERRKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGVMEGGSIPALSGLEDALKA 526
Query: 421 EQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 458
EQKAPPGTARRKR+++SR++FV+ AS++P PRGFG G+
Sbjct: 527 EQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGSGN 564
>gi|3746964|gb|AAC64139.1| signal recognition particle 54 kDa subunit precursor [Arabidopsis
thaliana]
Length = 564
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/458 (87%), Positives = 438/458 (95%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFVQ+VS+QAVG+G+IRGV+PDQQLVKIV DELVKLMGGEV
Sbjct: 107 MRDIRRALLEADVSLPVVRRFVQSVSDQAVGMGVIRGVKPDQQLVKIVHDELVKLMGGEV 166
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SEL FAKS PTVILLAGLQGVGKTTV AKLA YLKKQGKSCML+AGDVYRPAAIDQLVIL
Sbjct: 167 SELQFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVIL 226
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQVGVPVYTAGT+VKP+ IAKQGL+EAKK NVDVVI+DTAGRLQIDK MMDELKDVK+
Sbjct: 227 GEQVGVPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELKDVKKF 286
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 287 LNPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 346
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKA EVM+QEDAE++QKKIMSA FDFN
Sbjct: 347 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQKKIMSAKFDFN 406
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR VA+MGSM+RV+GMIPGMGK++PAQ+REAEK+L +MEAMIE MTPEERE+PEL
Sbjct: 407 DFLKQTRAVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEVMTPEERERPEL 466
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAESP RRKR+A+DSGKTEQQVS LVAQ+FQMRV+MKNLMGVMEGGS+PALS LEDALK+
Sbjct: 467 LAESPERRKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGVMEGGSIPALSGLEDALKA 526
Query: 421 EQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 458
EQKAPPGTARRKR+++SR++FV+ AS++P PRGFG G+
Sbjct: 527 EQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGSGN 564
>gi|297810481|ref|XP_002873124.1| hypothetical protein ARALYDRAFT_487173 [Arabidopsis lyrata subsp.
lyrata]
gi|297318961|gb|EFH49383.1| hypothetical protein ARALYDRAFT_487173 [Arabidopsis lyrata subsp.
lyrata]
Length = 562
Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/458 (87%), Positives = 438/458 (95%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFVQ+VS+QAVG+G+IRGV+PDQQLVKIV DELVKLMGGEV
Sbjct: 105 MRDIRRALLEADVSLPVVRRFVQSVSDQAVGMGVIRGVKPDQQLVKIVHDELVKLMGGEV 164
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SEL FAKS PTVILLAGLQGVGKTTV AKLA YLKKQGKSCML+AGDVYRPAAIDQLVIL
Sbjct: 165 SELQFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVIL 224
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQVGVPVYTAGT+VKP+ IAKQGL+EAKK NVDVVI+DTAGRLQIDK MMDELKDVK+
Sbjct: 225 GEQVGVPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELKDVKKF 284
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 285 LNPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 344
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKA EVM+QEDAE++QKKIMSA FDFN
Sbjct: 345 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQKKIMSAKFDFN 404
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR VA+MGSM+RV+GMIPGMGK++PAQ+REAEK+L +MEAMIE MTPEERE+PEL
Sbjct: 405 DFLKQTRAVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEVMTPEERERPEL 464
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAESP RRKR+A+DSGKTEQQVS LVAQ+FQMRV+MKNLMGVMEGGS+PALS LEDALK+
Sbjct: 465 LAESPERRKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGVMEGGSIPALSGLEDALKA 524
Query: 421 EQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 458
EQKAPPGTARRKR+++SR++FV+ AS++P PRGFG G+
Sbjct: 525 EQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGSGN 562
>gi|357511109|ref|XP_003625843.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
gi|355500858|gb|AES82061.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
Length = 553
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/455 (88%), Positives = 433/455 (95%), Gaps = 1/455 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFVQ+V++QAVGVG+ RGV+PDQQLVKIV DELV+LMGGEV
Sbjct: 97 MRDIRRALLEADVSLPVVRRFVQSVTDQAVGVGVTRGVKPDQQLVKIVHDELVQLMGGEV 156
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SEL FAK+ PTVILLAGLQGVGKTTV AKLANY KKQGKSCMLVAGDVYRPAAIDQL IL
Sbjct: 157 SELTFAKTGPTVILLAGLQGVGKTTVCAKLANYFKKQGKSCMLVAGDVYRPAAIDQLTIL 216
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QV VPVYTAGT+VKPS IAKQG EEAKKK +DVVIVDTAGRLQIDKAMMDELKDVKRV
Sbjct: 217 GKQVDVPVYTAGTDVKPSDIAKQGFEEAKKKKIDVVIVDTAGRLQIDKAMMDELKDVKRV 276
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 277 LNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 336
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAE++QKKIMSA FDFN
Sbjct: 337 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEDLQKKIMSAKFDFN 396
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR VA+MGS+SRVIGMIPGM K+TPAQ+REAE++L+IME +I+AMTPEEREKPEL
Sbjct: 397 DFLKQTRAVAQMGSVSRVIGMIPGMAKVTPAQIREAERNLEIMEVIIKAMTPEEREKPEL 456
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS+P LSNLE+ALK+
Sbjct: 457 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSMPTLSNLEEALKT 516
Query: 421 EQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFG 455
E+KAPPGTARR++++ESRR F D ++ R PRGFG
Sbjct: 517 EEKAPPGTARRRKKAESRRLFAD-STLRQPPRGFG 550
>gi|356572574|ref|XP_003554443.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Glycine max]
Length = 565
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/455 (90%), Positives = 436/455 (95%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFVQ+VS+QAVGVG+IRGVRPDQQLVKIV DELV+LMGGEV
Sbjct: 108 MRDIRRALLEADVSLPVVRRFVQSVSDQAVGVGVIRGVRPDQQLVKIVHDELVRLMGGEV 167
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SELVFAKS PTVILLAGLQGVGKTTV AKLANYLKKQGKSCMLVAGDVYRPAAIDQL IL
Sbjct: 168 SELVFAKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLAIL 227
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QV VPVYTAGT+VKPS+IAKQGLEEAKKK +DVVIVDTAGRLQIDK MMDELK+VK+
Sbjct: 228 GKQVDVPVYTAGTDVKPSEIAKQGLEEAKKKKIDVVIVDTAGRLQIDKTMMDELKEVKKA 287
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 288 LNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 347
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQ+VM+QEDAEE+QKKIMSA FDFN
Sbjct: 348 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQQVMRQEDAEELQKKIMSAKFDFN 407
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTRTVA+MGS+SRVIGMIPGMGK+TPAQ+R+AEK+L+ MEAMIEAMTPEEREKPEL
Sbjct: 408 DFLKQTRTVAKMGSVSRVIGMIPGMGKVTPAQIRDAEKNLQNMEAMIEAMTPEEREKPEL 467
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME GSLP LSNLE+ALK+
Sbjct: 468 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMESGSLPTLSNLEEALKA 527
Query: 421 EQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFG 455
E+KAPPGTARR++RSESR F D RPSPRGFG
Sbjct: 528 EEKAPPGTARRRKRSESRSVFGDSTPARPSPRGFG 562
>gi|356505382|ref|XP_003521470.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Glycine max]
Length = 565
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/455 (89%), Positives = 435/455 (95%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFVQ+VS+QAVGVG+IRGVRPDQQLVKIV +ELV+LMGGEV
Sbjct: 108 MRDIRRALLEADVSLPVVRRFVQSVSDQAVGVGVIRGVRPDQQLVKIVHEELVQLMGGEV 167
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SELVFAKS PTVILLAGLQGVGKTTV AKLANYLKKQGKSCMLVAGDVYRPAAIDQL IL
Sbjct: 168 SELVFAKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLAIL 227
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QV VPVYTAGT+VKPS+IAKQGLEEAKKK +DVVIVDTAGRLQIDK MMDELK+VK+
Sbjct: 228 GKQVDVPVYTAGTDVKPSEIAKQGLEEAKKKKIDVVIVDTAGRLQIDKTMMDELKEVKKA 287
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 288 LNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 347
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQ+VM+QEDAEE+QKKIMSA FDFN
Sbjct: 348 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQQVMRQEDAEELQKKIMSAKFDFN 407
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTRTVA+MGS+SRVIGMIPGMGK+TPAQ+R+AEK+L MEAMIEAMTPEEREKPEL
Sbjct: 408 DFLKQTRTVAKMGSVSRVIGMIPGMGKVTPAQIRDAEKNLLNMEAMIEAMTPEEREKPEL 467
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME GSLP LSNLE+ALK+
Sbjct: 468 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMESGSLPTLSNLEEALKA 527
Query: 421 EQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFG 455
E+KAPPGTARR++RSESR F D RPSPRGFG
Sbjct: 528 EEKAPPGTARRRKRSESRSVFGDSTPARPSPRGFG 562
>gi|440583671|emb|CCH47177.1| similar to signal recognition particle 54 kDa protein [Lupinus
angustifolius]
Length = 731
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/469 (85%), Positives = 437/469 (93%), Gaps = 14/469 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFVQAV++QAVG+G+IRGVRPDQQLVKIV DELVKLMGGE
Sbjct: 114 MRDIRRALLEADVSLPVVRRFVQAVTDQAVGLGVIRGVRPDQQLVKIVHDELVKLMGGEF 173
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SELVFAKS PTVILLAGLQGVGKTTV AKLANYLKKQGKSCMLVAGDVYRPAAIDQL IL
Sbjct: 174 SELVFAKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLAIL 233
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QV VPVYTAGT+VKPS+IA+QGLEEAKKKN+DVV+VDTAGRLQI+K+MMDELK+VK+V
Sbjct: 234 GKQVDVPVYTAGTDVKPSEIARQGLEEAKKKNIDVVVVDTAGRLQINKSMMDELKEVKQV 293
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
LNPTE+LLVVDAMTGQEAAALVTTFN+EIGITGAIL+KLDGDSRGGAALSVKEVSGKPIK
Sbjct: 294 LNPTEILLVVDAMTGQEAAALVTTFNLEIGITGAILSKLDGDSRGGAALSVKEVSGKPIK 353
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEK++EVMQQEDAEE+QKKIMSA FDFN
Sbjct: 354 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKSKEVMQQEDAEELQKKIMSAKFDFN 413
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR+VARMGS+SRVIGMIPGM K+TPAQ+R+AEK+L+I EAMIEAMTPEEREKPEL
Sbjct: 414 DFLKQTRSVARMGSVSRVIGMIPGMAKVTPAQIRDAEKNLQITEAMIEAMTPEEREKPEL 473
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAESP RRKRVAQDSGKTEQQVSQLVAQ+FQMRVRMKNL+GVMEGGS+PALSNLE++LK+
Sbjct: 474 LAESPERRKRVAQDSGKTEQQVSQLVAQIFQMRVRMKNLLGVMEGGSMPALSNLEESLKT 533
Query: 421 EQK--------------APPGTARRKRRSESRRQFVDPASTRPSPRGFG 455
E+K APPGTARR+RR ESR+QF + S RP RGF
Sbjct: 534 EEKIQNLDAYLFLHSCQAPPGTARRRRRPESRKQFANSTSARPDARGFA 582
>gi|224088549|ref|XP_002308469.1| predicted protein [Populus trichocarpa]
gi|222854445|gb|EEE91992.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/423 (91%), Positives = 410/423 (96%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFVQ+V +QAVGVGLIRGV+PDQQ VKIVRDELVKLMGGEV
Sbjct: 119 MRDIRRALLEADVSLPVVRRFVQSVGDQAVGVGLIRGVKPDQQFVKIVRDELVKLMGGEV 178
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SELVFAKS PTVILLAGLQGVGKTT+ AKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL
Sbjct: 179 SELVFAKSGPTVILLAGLQGVGKTTICAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 238
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQVGV VYT GT+VKPS+IA++GL EAKKKN+DVVIVDTAGRLQIDKAMMDELKDVKRV
Sbjct: 239 GEQVGVSVYTEGTDVKPSEIARKGLAEAKKKNIDVVIVDTAGRLQIDKAMMDELKDVKRV 298
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKE+SGKPIK
Sbjct: 299 LNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEISGKPIK 358
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAE++QKKIMSANFDFN
Sbjct: 359 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEDLQKKIMSANFDFN 418
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR VA+MGSM+RV+GMIPGM K+TPAQ+REAEKSLKIME MIEAMTPEEREKPEL
Sbjct: 419 DFLKQTRAVAKMGSMTRVLGMIPGMAKVTPAQIREAEKSLKIMEGMIEAMTPEEREKPEL 478
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAESP RRKR+AQ SGKTEQQVSQLVAQLFQMRVRMKNLMG M+GGS+P+LSNLEDALK+
Sbjct: 479 LAESPQRRKRIAQASGKTEQQVSQLVAQLFQMRVRMKNLMGAMDGGSIPSLSNLEDALKT 538
Query: 421 EQK 423
EQK
Sbjct: 539 EQK 541
>gi|3746903|gb|AAC64109.1| signal recognition particle 54 kDa subunit precursor [Pisum
sativum]
Length = 525
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/457 (83%), Positives = 416/457 (91%), Gaps = 4/457 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRA ADVSLPVVRRFVQ+V+++AVGVG+ RGV+PDQQLVKIV DELV+LMGGEV
Sbjct: 68 MRDIRRA--RADVSLPVVRRFVQSVTDKAVGVGVTRGVKPDQQLVKIVHDELVQLMGGEV 125
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SEL FA S PTVILLAGLQGVGKTTV AKLA Y KKQGKSCMLVAGDVYRPAAID L IL
Sbjct: 126 SELTFANSGPTVILLAGLQGVGKTTVCAKLATYFKKQGKSCMLVAGDVYRPAAIDXLTIL 185
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QV VPVY AGT+VKPS IAKQG EEAKKK +DVVIVDTAG LQIDKAMMDELK+VK+V
Sbjct: 186 GKQVDVPVYAAGTDVKPSVIAKQGFEEAKKKKIDVVIVDTAGSLQIDKAMMDELKEVKQV 245
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 246 LNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 305
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVM +EDAE+MQKKIMSA FDFN
Sbjct: 306 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMLEEDAEDMQKKIMSAKFDFN 365
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
D LKQTRTVA+MGS+SRV+GMIPGM K+TPAQ+REAEK+L+ ME +IEAMTPEER KPEL
Sbjct: 366 DLLKQTRTVAKMGSVSRVLGMIPGMAKVTPAQIREAEKNLQFMEVIIEAMTPEERGKPEL 425
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAE PVRRK VAQ+SGKTEQQVSQLVAQLFQMRVRMK LMGVMEGGS+P LSNLE+ALK+
Sbjct: 426 LAEFPVRRKSVAQESGKTEQQVSQLVAQLFQMRVRMKKLMGVMEGGSMPTLSNLEEALKA 485
Query: 421 EQKAPPGTARRKRRSESRRQFVDPAS--TRPSPRGFG 455
+KAPPGTARRK++ +R F +S + P+PRGFG
Sbjct: 486 NKKAPPGTARRKKKGGLKRLFKGRSSKISLPAPRGFG 522
>gi|148906612|gb|ABR16458.1| unknown [Picea sitchensis]
Length = 573
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/457 (76%), Positives = 407/457 (89%), Gaps = 2/457 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFV+ V+EQA+GVG++ GVR DQQLVK+V DELVKLMGGEV
Sbjct: 116 MRDIRRALLEADVSLPVVRRFVKVVTEQAIGVGVVPGVRSDQQLVKVVNDELVKLMGGEV 175
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+EL FAK+ PTVIL+AGLQGVGKTT AKLA YLKK+GK+CMLVA DVYRPAAIDQLVIL
Sbjct: 176 AELDFAKTGPTVILMAGLQGVGKTTACAKLALYLKKKGKNCMLVAADVYRPAAIDQLVIL 235
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QV VPVY AGT+V P +IAKQGLEEAKKK++DVVIVDTAGRLQ+DK+MMDELK VK+
Sbjct: 236 GKQVEVPVYEAGTKVTPMEIAKQGLEEAKKKDMDVVIVDTAGRLQVDKSMMDELKQVKQA 295
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTEVLLVVDAMTGQEAAALV FN+EIGITGAILTKLDGDSRGGAALSV+EVSGKPIK
Sbjct: 296 MNPTEVLLVVDAMTGQEAAALVAAFNLEIGITGAILTKLDGDSRGGAALSVREVSGKPIK 355
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG+GERMEDLEPFYPDRMA RILGMGDVLSFVEKAQ+VM++E+AEE+QKKIM + FDFN
Sbjct: 356 FVGQGERMEDLEPFYPDRMASRILGMGDVLSFVEKAQQVMKEEEAEELQKKIMESKFDFN 415
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR +ARMGSM+RVIGMIPGMGK++ AQ+R+AEKSL+I+E+MI AMT EER PEL
Sbjct: 416 DFLKQTRVIARMGSMNRVIGMIPGMGKVSSAQIRDAEKSLRIVESMINAMTEEERANPEL 475
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LA+SP RR+++A DSG++EQQVSQL+AQLFQMR MKN+MG M+GG+ P + NLE+ALK
Sbjct: 476 LAQSPARRRKIAVDSGRSEQQVSQLIAQLFQMRAGMKNMMGAMQGGT-PGIDNLEEALKV 534
Query: 421 EQKAPPGTA-RRKRRSESRRQFVDPASTRPSPRGFGG 456
QK PPG A RRK R+ ++Q + AS + +PRGFG
Sbjct: 535 SQKVPPGMAKRRKNRTNLKKQLTNTASLQDTPRGFGA 571
>gi|222615533|gb|EEE51665.1| hypothetical protein OsJ_33001 [Oryza sativa Japonica Group]
Length = 550
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/441 (80%), Positives = 395/441 (89%), Gaps = 1/441 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFV ++SE+A+G LIRGVRP+QQLVKIV DELVKLMGGEV
Sbjct: 101 MRDIRRALLEADVSLPVVRRFVSSISEKALGSDLIRGVRPEQQLVKIVHDELVKLMGGEV 160
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+LVFAKS PTVILLAGLQGVGKTTV AKLA YLKK GKSCMLVA DVYRPAAIDQL IL
Sbjct: 161 SDLVFAKSGPTVILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAIDQLTIL 220
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQVGVPVY+ GTE KP+QI K +EEAK+KN+D +++DTAGRLQIDK+MM ELK+VK+
Sbjct: 221 GEQVGVPVYSEGTEAKPAQITKNAVEEAKRKNIDAIVMDTAGRLQIDKSMMVELKEVKKA 280
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 281 VNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 340
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VGRGERMEDLE FYPDRMA R+LGMGDVLSFVEKAQEVM+QEDA E+QKKIMSA FDFN
Sbjct: 341 FVGRGERMEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVMRQEDAVELQKKIMSAKFDFN 400
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ++ VA+MGSMSRV+GMIPGM K+TPAQ+REAEK L +E+MI AMT EEREKPEL
Sbjct: 401 DFLKQSQNVAKMGSMSRVVGMIPGMNKVTPAQIREAEKRLAFVESMINAMTAEEREKPEL 460
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPALSNLEDALK 419
LAES RR RVA++SGK+EQ+VSQLVAQLFQMR +M+ LMGVM G +LP + NL ++L
Sbjct: 461 LAESRDRRIRVAEESGKSEQEVSQLVAQLFQMRAQMQKLMGVMTGQEALPGMGNLMESLN 520
Query: 420 SEQKAPPGTARRKRRSESRRQ 440
+++KAPPGTARRKRR RQ
Sbjct: 521 ADEKAPPGTARRKRRHSKTRQ 541
>gi|218185264|gb|EEC67691.1| hypothetical protein OsI_35150 [Oryza sativa Indica Group]
Length = 550
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/441 (79%), Positives = 393/441 (89%), Gaps = 1/441 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFV ++SE+A+G LIRGVRP+QQLVKIV DELV+LMGGEV
Sbjct: 101 MRDIRRALLEADVSLPVVRRFVSSISEKALGSDLIRGVRPEQQLVKIVHDELVQLMGGEV 160
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+LVFAKS PTVILLAGLQGVGKTTV AKLA YLKK GKSCMLVA DVYRPAAIDQL IL
Sbjct: 161 SDLVFAKSGPTVILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAIDQLTIL 220
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQVGVPVY+ TE KP+QI K +EEAK+KN+D +++DTAGRLQIDK+MM ELK+VK+
Sbjct: 221 GEQVGVPVYSERTEAKPAQITKNAVEEAKRKNIDAIVMDTAGRLQIDKSMMVELKEVKKA 280
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 281 VNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 340
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VGRGERMEDLE FYPDRMA R+LGMGDVLSFVEKAQEVM+QEDA E+QKKIMSA FDFN
Sbjct: 341 FVGRGERMEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVMRQEDAVELQKKIMSAKFDFN 400
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ++ VA+MGSMSRV+GMIPGM K+TPAQ+REAEK L +E+MI AMT EEREKPEL
Sbjct: 401 DFLKQSQNVAKMGSMSRVVGMIPGMNKVTPAQIREAEKRLAFVESMINAMTAEEREKPEL 460
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPALSNLEDALK 419
LAES RR RVA++SGK+E +VSQLVAQLFQMR +M+ LMGVM G +LP + NL ++L
Sbjct: 461 LAESRDRRIRVAEESGKSEHEVSQLVAQLFQMRAQMQKLMGVMTGQEALPGMGNLMESLN 520
Query: 420 SEQKAPPGTARRKRRSESRRQ 440
+++KAPPGTARRKRR RQ
Sbjct: 521 ADEKAPPGTARRKRRHSKTRQ 541
>gi|413924904|gb|AFW64836.1| hypothetical protein ZEAMMB73_999058 [Zea mays]
Length = 545
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/441 (78%), Positives = 396/441 (89%), Gaps = 1/441 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFV +VS++A+G IRGVRPDQQLVKIV DELV+LMGGEV
Sbjct: 97 MRDIRRALLEADVSLPVVRRFVSSVSDKALGANAIRGVRPDQQLVKIVHDELVQLMGGEV 156
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++VFAKS PTVILLAGLQGVGKTTV AKLA YLKK GKSCMLVA D+YRPAAIDQL IL
Sbjct: 157 SDIVFAKSGPTVILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADIYRPAAIDQLTIL 216
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QVGVPVY+ GTE KP+QI K +EEAK KN+D ++VDTAGRLQID++MMDELK+VK+
Sbjct: 217 GKQVGVPVYSEGTEAKPTQITKNAMEEAKSKNIDAIVVDTAGRLQIDRSMMDELKEVKKA 276
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSG+PIK
Sbjct: 277 VNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGRPIK 336
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VGRGER+EDLE FYPDRMA R+LGMGDVLSFVEK QEVM+QE+A E+QKKIMSA FDFN
Sbjct: 337 FVGRGERLEDLELFYPDRMAQRVLGMGDVLSFVEKTQEVMRQEEAIELQKKIMSAKFDFN 396
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ++ VA+MGSMSR+IGM+PGM KITPAQ+REAEK L +E+MI AMT EEREKPEL
Sbjct: 397 DFLKQSQNVAKMGSMSRIIGMMPGMNKITPAQIREAEKRLAFVESMINAMTAEEREKPEL 456
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPALSNLEDALK 419
LAES RR RVA++SGKTEQ+VSQLVAQLFQMR +M+ LMG+++G ++ + +L D+LK
Sbjct: 457 LAESRERRIRVAEESGKTEQEVSQLVAQLFQMRAQMQKLMGMVQGQEAIAGMGDLMDSLK 516
Query: 420 SEQKAPPGTARRKRRSESRRQ 440
SE+KAPPGTARRKRR+ + +Q
Sbjct: 517 SEEKAPPGTARRKRRNNTSKQ 537
>gi|242084798|ref|XP_002442824.1| hypothetical protein SORBIDRAFT_08g003410 [Sorghum bicolor]
gi|241943517|gb|EES16662.1| hypothetical protein SORBIDRAFT_08g003410 [Sorghum bicolor]
Length = 559
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/440 (77%), Positives = 393/440 (89%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRF+++VSE+AVG +IRGVRPDQQLVK+V DELV+LMGGEV
Sbjct: 108 MRDIRRALLEADVSLPVVRRFIESVSEKAVGTDVIRGVRPDQQLVKVVNDELVQLMGGEV 167
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+LVFAKS PT+ILLAGLQGVGKTTV AKLA YLKK GKSCMLVA DVYRPAAIDQL IL
Sbjct: 168 SDLVFAKSGPTIILLAGLQGVGKTTVCAKLAFYLKKMGKSCMLVAADVYRPAAIDQLTIL 227
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G++VGVPVY+ GTE KPSQIAK GL+EAK DV+IVDTAGRLQ+DK+MM+ELK+VK+
Sbjct: 228 GKKVGVPVYSEGTEAKPSQIAKNGLKEAKVNKADVIIVDTAGRLQVDKSMMNELKEVKKA 287
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTEVLLVVDAMTGQEAA LV++FN EIGITGAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 288 VNPTEVLLVVDAMTGQEAAGLVSSFNDEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 347
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG+GER+EDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDAEE+QKKI+SA F+FN
Sbjct: 348 FVGQGERIEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFN 407
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+MI MTPEERE+PEL
Sbjct: 408 DFLKQTQMIAQMGSFSRLIGMIPGMNKVTPAQIREAEKNLKFMESMINVMTPEERERPEL 467
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAES RRKRVA+DSGKTEQQV QLVAQLFQMR +M+ +MG ++G P + L +++K+
Sbjct: 468 LAESRERRKRVAKDSGKTEQQVGQLVAQLFQMRAKMQKMMGAIQGKESPDMDELMESMKA 527
Query: 421 EQKAPPGTARRKRRSESRRQ 440
E++A GT RR+R+ + RQ
Sbjct: 528 EEQAAAGTGRRRRKYGNLRQ 547
>gi|413924903|gb|AFW64835.1| hypothetical protein ZEAMMB73_999058 [Zea mays]
Length = 486
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/448 (77%), Positives = 396/448 (88%), Gaps = 8/448 (1%)
Query: 1 MRDIRRALLEADVS-------LPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELV 53
MRDIRRALLEADVS LPVVRRFV +VS++A+G IRGVRPDQQLVKIV DELV
Sbjct: 31 MRDIRRALLEADVSSLHFQVSLPVVRRFVSSVSDKALGANAIRGVRPDQQLVKIVHDELV 90
Query: 54 KLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAA 113
+LMGGEVS++VFAKS PTVILLAGLQGVGKTTV AKLA YLKK GKSCMLVA D+YRPAA
Sbjct: 91 QLMGGEVSDIVFAKSGPTVILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADIYRPAA 150
Query: 114 IDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDE 173
IDQL ILG+QVGVPVY+ GTE KP+QI K +EEAK KN+D ++VDTAGRLQID++MMDE
Sbjct: 151 IDQLTILGKQVGVPVYSEGTEAKPTQITKNAMEEAKSKNIDAIVVDTAGRLQIDRSMMDE 210
Query: 174 LKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE 233
LK+VK+ +NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE
Sbjct: 211 LKEVKKAVNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE 270
Query: 234 VSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIM 293
VSG+PIK VGRGER+EDLE FYPDRMA R+LGMGDVLSFVEK QEVM+QE+A E+QKKIM
Sbjct: 271 VSGRPIKFVGRGERLEDLELFYPDRMAQRVLGMGDVLSFVEKTQEVMRQEEAIELQKKIM 330
Query: 294 SANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPE 353
SA FDFNDFLKQ++ VA+MGSMSR+IGM+PGM KITPAQ+REAEK L +E+MI AMT E
Sbjct: 331 SAKFDFNDFLKQSQNVAKMGSMSRIIGMMPGMNKITPAQIREAEKRLAFVESMINAMTAE 390
Query: 354 EREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPALS 412
EREKPELLAES RR RVA++SGKTEQ+VSQLVAQLFQMR +M+ LMG+++G ++ +
Sbjct: 391 EREKPELLAESRERRIRVAEESGKTEQEVSQLVAQLFQMRAQMQKLMGMVQGQEAIAGMG 450
Query: 413 NLEDALKSEQKAPPGTARRKRRSESRRQ 440
+L D+LKSE+KAPPGTARRKRR+ + +Q
Sbjct: 451 DLMDSLKSEEKAPPGTARRKRRNNTSKQ 478
>gi|218185265|gb|EEC67692.1| hypothetical protein OsI_35151 [Oryza sativa Indica Group]
Length = 557
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/444 (76%), Positives = 396/444 (89%), Gaps = 1/444 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVR F+++V+E+AVG +IRGV+P+QQLVK+V DELV+LMGGEV
Sbjct: 106 MRDIRRALLEADVSLPVVRSFIESVTEKAVGTDVIRGVKPEQQLVKVVNDELVQLMGGEV 165
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+LVFAK+ PTVILLAGLQGVGKTTV AKLA YLKK GKSCML+A DVYRPAAIDQL IL
Sbjct: 166 SDLVFAKTAPTVILLAGLQGVGKTTVCAKLAYYLKKMGKSCMLIAADVYRPAAIDQLTIL 225
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QVGVPVY+ GTE KPSQIAK G++EAK K DV+IVDTAGRLQ+DKAMM ELK+VKR
Sbjct: 226 GKQVGVPVYSEGTEAKPSQIAKNGIKEAKSKKTDVIIVDTAGRLQVDKAMMSELKEVKRA 285
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTEVLLVVDAMTGQEAA+LV+TFN+EIGITGAILTKLDGDSRGGAALS+KEVSGKPIK
Sbjct: 286 VNPTEVLLVVDAMTGQEAASLVSTFNVEIGITGAILTKLDGDSRGGAALSIKEVSGKPIK 345
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VGRGERMEDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDAEE+QKKI+SA F+FN
Sbjct: 346 FVGRGERMEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFN 405
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+MI MTPEERE+PEL
Sbjct: 406 DFLKQTQAIAQMGSFSRIIGMIPGMNKVTPAQIREAEKNLKFMESMINVMTPEERERPEL 465
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAES RR RVA++SGK E+QVSQLVAQLF+MR +M+ +MG M+G P + L D++K+
Sbjct: 466 LAESRERRIRVAKESGKNERQVSQLVAQLFRMRAQMQKMMGAMQGQDTPDMEGLMDSIKA 525
Query: 421 EQKAPPGTARRKRRSES-RRQFVD 443
E++A GT +R+R+ + RR+ +D
Sbjct: 526 EEQAAAGTGKRRRKYGNLRRRDLD 549
>gi|115484239|ref|NP_001065781.1| Os11g0153700 [Oryza sativa Japonica Group]
gi|62701662|gb|AAX92735.1| signal recognition particle protein, putative [Oryza sativa
Japonica Group]
gi|108864005|gb|ABG22368.1| Signal recognition particle 54 kDa protein, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|113644485|dbj|BAF27626.1| Os11g0153700 [Oryza sativa Japonica Group]
gi|215765043|dbj|BAG86740.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615534|gb|EEE51666.1| hypothetical protein OsJ_33002 [Oryza sativa Japonica Group]
Length = 557
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/444 (76%), Positives = 396/444 (89%), Gaps = 1/444 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVR F+++V+E+AVG +IRGV+P+QQLVK+V DELV+LMGGEV
Sbjct: 106 MRDIRRALLEADVSLPVVRSFIESVTEKAVGTDVIRGVKPEQQLVKVVNDELVQLMGGEV 165
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+LVFAK+ PTVILLAGLQGVGKTTV AKLA YLKK GKSCML+A DVYRPAAIDQL IL
Sbjct: 166 SDLVFAKTAPTVILLAGLQGVGKTTVCAKLAYYLKKMGKSCMLIAADVYRPAAIDQLTIL 225
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QVGVPVY+ GTE KPSQIAK G++EAK K DV+IVDTAGRLQ+DKAMM ELK+VKR
Sbjct: 226 GKQVGVPVYSEGTEAKPSQIAKNGIKEAKSKKTDVIIVDTAGRLQVDKAMMSELKEVKRA 285
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTEVLLVVDAMTGQEAA+LV+TFN+EIGITGAILTKLDGDSRGGAALS+KEVSGKPIK
Sbjct: 286 VNPTEVLLVVDAMTGQEAASLVSTFNVEIGITGAILTKLDGDSRGGAALSIKEVSGKPIK 345
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VGRGERMEDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDAEE+QKKI+SA F+FN
Sbjct: 346 FVGRGERMEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFN 405
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+MI MTPEERE+PEL
Sbjct: 406 DFLKQTQAIAQMGSFSRIIGMIPGMNKVTPAQIREAEKNLKFMESMINVMTPEERERPEL 465
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAES RR RVA++SGK E+QVSQLVAQLF+MR +M+ +MG M+G P + L D++K+
Sbjct: 466 LAESRERRIRVAKESGKNERQVSQLVAQLFRMRAQMQKMMGAMQGQDTPDMEGLMDSIKA 525
Query: 421 EQKAPPGTARRKRRSES-RRQFVD 443
E++A GT +R+R+ + RR+ +D
Sbjct: 526 EEQAAAGTGKRRRKYGNLRRRDLD 549
>gi|108864006|gb|ABG22369.1| Signal recognition particle 54 kDa protein, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
Length = 482
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/455 (74%), Positives = 400/455 (87%), Gaps = 7/455 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVR F+++V+E+AVG +IRGV+P+QQLVK+V DELV+LMGGEV
Sbjct: 31 MRDIRRALLEADVSLPVVRSFIESVTEKAVGTDVIRGVKPEQQLVKVVNDELVQLMGGEV 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+LVFAK+ PTVILLAGLQGVGKTTV AKLA YLKK GKSCML+A DVYRPAAIDQL IL
Sbjct: 91 SDLVFAKTAPTVILLAGLQGVGKTTVCAKLAYYLKKMGKSCMLIAADVYRPAAIDQLTIL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QVGVPVY+ GTE KPSQIAK G++EAK K DV+IVDTAGRLQ+DKAMM ELK+VKR
Sbjct: 151 GKQVGVPVYSEGTEAKPSQIAKNGIKEAKSKKTDVIIVDTAGRLQVDKAMMSELKEVKRA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTEVLLVVDAMTGQEAA+LV+TFN+EIGITGAILTKLDGDSRGGAALS+KEVSGKPIK
Sbjct: 211 VNPTEVLLVVDAMTGQEAASLVSTFNVEIGITGAILTKLDGDSRGGAALSIKEVSGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VGRGERMEDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDAEE+QKKI+SA F+FN
Sbjct: 271 FVGRGERMEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+MI MTPEERE+PEL
Sbjct: 331 DFLKQTQAIAQMGSFSRIIGMIPGMNKVTPAQIREAEKNLKFMESMINVMTPEERERPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAES RR RVA++SGK E+QVSQLVAQLF+MR +M+ +MG M+G P + L D++K+
Sbjct: 391 LAESRERRIRVAKESGKNERQVSQLVAQLFRMRAQMQKMMGAMQGQDTPDMEGLMDSIKA 450
Query: 421 EQKAPPGTARRKRRSES-RRQFVDPASTRPSPRGF 454
E++A GT +R+R+ + RR+ +D + RGF
Sbjct: 451 EEQAAAGTGKRRRKYGNLRRRDLD------AMRGF 479
>gi|226501792|ref|NP_001142003.1| uncharacterized protein LOC100274153 [Zea mays]
gi|194706754|gb|ACF87461.1| unknown [Zea mays]
gi|413916134|gb|AFW56066.1| hypothetical protein ZEAMMB73_792527 [Zea mays]
Length = 556
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/440 (77%), Positives = 392/440 (89%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRF+++VSE+AVG +IRGVRPDQQLVK+V DELV+LMGGEV
Sbjct: 105 MRDIRRALLEADVSLPVVRRFIESVSEKAVGTDVIRGVRPDQQLVKVVSDELVQLMGGEV 164
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+LVFAKS PT+ILLAGLQGVGKTTV AKLA YLKK GKSCMLVA DVYRPAAIDQL IL
Sbjct: 165 SDLVFAKSGPTIILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAIDQLTIL 224
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G++VGVPVY+ GTE KPSQIAK GL+EAK DV+IVDTAGRLQ+DKAMM+ELK+VK+
Sbjct: 225 GKKVGVPVYSEGTEAKPSQIAKNGLKEAKVNKADVIIVDTAGRLQVDKAMMNELKEVKKA 284
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTEVLLVVDAMTGQEAA LV++FN EIGITGAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 285 VNPTEVLLVVDAMTGQEAAGLVSSFNDEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 344
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG+GER+EDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDA+E+QKKI+SA F+FN
Sbjct: 345 FVGQGERIEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDADELQKKILSAKFNFN 404
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+MI MT EERE+PEL
Sbjct: 405 DFLKQTQMIAKMGSFSRLIGMIPGMNKVTPAQIREAEKNLKFMESMINVMTLEERERPEL 464
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LAES RRKRVA+DSGKTEQQVSQLVAQLFQMR +M+ +MG M+G P + L ++K+
Sbjct: 465 LAESRERRKRVAKDSGKTEQQVSQLVAQLFQMRAKMQKMMGAMQGKESPDMDELMGSMKA 524
Query: 421 EQKAPPGTARRKRRSESRRQ 440
E+++ GT RR+R+ + RQ
Sbjct: 525 EEQSAAGTGRRRRKYGNLRQ 544
>gi|357153012|ref|XP_003576310.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Brachypodium distachyon]
Length = 554
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/425 (78%), Positives = 379/425 (89%), Gaps = 1/425 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFV +VSE+A+G G+IRG+RPDQQLVKIV DELV+LMGGEV
Sbjct: 101 MRDIRRALLEADVSLPVVRRFVSSVSEKALGSGVIRGIRPDQQLVKIVHDELVQLMGGEV 160
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+LVFAK+ PTVILLAGLQGVGKTTV AKLA YLKK GKSCMLVA DVYRPAAIDQL +L
Sbjct: 161 SDLVFAKTGPTVILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAIDQLTVL 220
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQVGVPVY+ GT KP+QI K +EEAK+K +D ++VDTAGRLQIDK MMDELK+VK+
Sbjct: 221 GEQVGVPVYSEGTGAKPAQITKNAVEEAKRKKIDAIVVDTAGRLQIDKTMMDELKEVKKA 280
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTE+LLVVDAMTGQEAAALVTTFNIEIGI+GAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 281 VNPTEILLVVDAMTGQEAAALVTTFNIEIGISGAILTKLDGDSRGGAALSVKEVSGKPIK 340
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VGRGERMEDLE FYPDRMA R+LGMGDVLSFVEKAQEV++QED E+QKKIMSA FDFN
Sbjct: 341 FVGRGERMEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVVRQEDTIELQKKIMSAKFDFN 400
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQT+ VA+MGSMSRVIGMIPGM K+TPAQ+REAEK L +E+MI AMT EEREKPEL
Sbjct: 401 DFLKQTQNVAKMGSMSRVIGMIPGMNKVTPAQIREAEKRLAFVESMINAMTAEEREKPEL 460
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPALSNLEDALK 419
LAES RR RVA++S KTEQ+V QLVAQLFQMR +M+ LMG+M+G ++ + +L D+L
Sbjct: 461 LAESRERRIRVAEESEKTEQEVGQLVAQLFQMRAQMQKLMGMMQGQEAITGMGDLMDSLN 520
Query: 420 SEQKA 424
+++KA
Sbjct: 521 ADEKA 525
>gi|326487934|dbj|BAJ89806.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326495310|dbj|BAJ85751.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 554
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/425 (77%), Positives = 378/425 (88%), Gaps = 1/425 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFV +VSE+A+G +IRG+RP+QQLVKIV DELV+LMGGEV
Sbjct: 101 MRDIRRALLEADVSLPVVRRFVSSVSEKALGSDVIRGIRPEQQLVKIVHDELVQLMGGEV 160
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+LVFAK+ PTVILLAGLQGVGKTTV AKLA YLKK GKSCMLVA DVYRPAAIDQL +L
Sbjct: 161 SDLVFAKTGPTVILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAIDQLTVL 220
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQVGVPVY+ GT KP++I K +EEAK+ N+D ++VDTAGRLQIDK MM ELK+VK+
Sbjct: 221 GEQVGVPVYSEGTTAKPAEITKNAMEEAKRNNIDAIVVDTAGRLQIDKTMMVELKEVKKS 280
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTE+LLVVDAMTGQEAAALVTTFNIEIGI+GAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 281 VNPTEILLVVDAMTGQEAAALVTTFNIEIGISGAILTKLDGDSRGGAALSVKEVSGKPIK 340
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VGRGERMEDLE FYPDRMA R+LGMGDVLSFVEKAQEV++QED E+QKKIMSA FDFN
Sbjct: 341 FVGRGERMEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVVRQEDTTELQKKIMSAKFDFN 400
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQT+ VA+MGSMSRVIGMIPGM K+TPAQ+REAEK L +E+MI AMT EE+EKPEL
Sbjct: 401 DFLKQTQNVAKMGSMSRVIGMIPGMNKVTPAQIREAEKRLAFVESMINAMTAEEKEKPEL 460
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPALSNLEDALK 419
LAES RR RVA++S KTEQ+VSQLVAQLFQMR +MK LMG+M+G ++ + +L D+L
Sbjct: 461 LAESRERRIRVAEESEKTEQEVSQLVAQLFQMRAQMKKLMGMMQGQEAIAGMGDLMDSLN 520
Query: 420 SEQKA 424
+++KA
Sbjct: 521 ADEKA 525
>gi|357157550|ref|XP_003577835.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Brachypodium distachyon]
Length = 548
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/455 (71%), Positives = 394/455 (86%), Gaps = 7/455 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVS+PV R F+++V+E+A+G +I GV+P+QQLVK+V DELV+LMGG+V
Sbjct: 98 MRDIRRALLEADVSVPVARSFIESVTEKAIGTDVIPGVQPEQQLVKVVNDELVQLMGGDV 157
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SELVFAKS PTVILLAGLQGVGKTTV AKLA YLKK GKSCMLVA DVYRPAAIDQL IL
Sbjct: 158 SELVFAKSGPTVILLAGLQGVGKTTVCAKLAFYLKKMGKSCMLVAADVYRPAAIDQLTIL 217
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G++VGVPVY+ GT+ KPS IAK GL+EAK K DV+IVDTAGRLQ+DKAMM+ELK+VK+
Sbjct: 218 GKKVGVPVYSEGTDAKPSDIAKNGLKEAKSKKTDVIIVDTAGRLQVDKAMMNELKEVKKA 277
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ PTEVLLVVDAMTGQEAA+LV FN E+GITGAILTKLDGDSRGGAALS+KEVSGKPIK
Sbjct: 278 VKPTEVLLVVDAMTGQEAASLVGAFNGEVGITGAILTKLDGDSRGGAALSIKEVSGKPIK 337
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VGRGER+EDLEPFYPDRMA RILGMGDVLSFVE+AQ+VM+QE+AEE+Q KIMSA F+FN
Sbjct: 338 FVGRGERVEDLEPFYPDRMAQRILGMGDVLSFVEQAQQVMRQEEAEELQNKIMSAKFNFN 397
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQT+ +++MGS SR+IGMIPGM K+TPAQ+REAEK++K ME+MI M+ +ERE+PEL
Sbjct: 398 DFLKQTKAISQMGSFSRIIGMIPGMNKVTPAQIREAEKNVKFMESMINVMSADERERPEL 457
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LA S RR+RVA+DSGKTEQQVSQLV+QLF+MR RM+ +MG M+G P + NL +++K+
Sbjct: 458 LAGSRERRRRVAKDSGKTEQQVSQLVSQLFKMRARMQKMMGAMQGKDTPDMDNLMESIKA 517
Query: 421 EQKAPPGTARRKRRSES-RRQFVDPASTRPSPRGF 454
E++A GT +R+R+ + RR+ +D S RG+
Sbjct: 518 EEQAATGTGQRRRKYGNLRRRDLD------SMRGY 546
>gi|242070027|ref|XP_002450290.1| hypothetical protein SORBIDRAFT_05g003290 [Sorghum bicolor]
gi|241936133|gb|EES09278.1| hypothetical protein SORBIDRAFT_05g003290 [Sorghum bicolor]
Length = 539
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/441 (74%), Positives = 380/441 (86%), Gaps = 13/441 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFV +VS++A+G IRGVRPDQQLVKIV DELV+LMGGEV
Sbjct: 103 MRDIRRALLEADVSLPVVRRFVSSVSDKALGANAIRGVRPDQQLVKIVHDELVQLMGGEV 162
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+LVF+KS PTVILLA T +L QGKSCMLVA DVYRPAAIDQL IL
Sbjct: 163 SDLVFSKSGPTVILLA------DTYTRVRL------QGKSCMLVAADVYRPAAIDQLTIL 210
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QVGVPVY+ GTE KP+QI K +EEAK KN+D ++VDTAGRLQIDK+MMDELK+VK+
Sbjct: 211 GKQVGVPVYSEGTEAKPTQITKNAMEEAKSKNIDAIVVDTAGRLQIDKSMMDELKEVKKA 270
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK
Sbjct: 271 VNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 330
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VGRGER+EDLE FYPDRMA R+LGMGDVLSFVEK QEVM+QE+A E+QKKIMSA FDFN
Sbjct: 331 FVGRGERLEDLELFYPDRMAQRVLGMGDVLSFVEKTQEVMRQEEAVELQKKIMSAKFDFN 390
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ++ VA+MGSMSR+IGM+PGM KITPAQ+REAEK L +E+MI AMT EEREKPEL
Sbjct: 391 DFLKQSQNVAKMGSMSRIIGMMPGMNKITPAQIREAEKRLAFVESMINAMTAEEREKPEL 450
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG-GSLPALSNLEDALK 419
LAES RR RVA++SGKTEQ+VSQLVAQLFQMR +M+ LM +++G ++ + +L D+LK
Sbjct: 451 LAESRERRIRVAEESGKTEQEVSQLVAQLFQMRAQMQKLMSMVQGQDAIAGMGDLMDSLK 510
Query: 420 SEQKAPPGTARRKRRSESRRQ 440
+E+KAPPGTARR+RR+ +Q
Sbjct: 511 AEEKAPPGTARRRRRNSKPKQ 531
>gi|168001070|ref|XP_001753238.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695524|gb|EDQ81867.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 617
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/456 (69%), Positives = 385/456 (84%), Gaps = 1/456 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M+DIRRALLEADVSLPVVRRFV++VSE+A+G+G++RGVRPDQQLVK+V DELV LMGGE+
Sbjct: 156 MKDIRRALLEADVSLPVVRRFVKSVSEKAIGMGVVRGVRPDQQLVKVVNDELVGLMGGEM 215
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ FAKS PTVIL+AGLQGVGKTT KLA + KK+GKS M+VA DVYRPAAIDQLV L
Sbjct: 216 VGIEFAKSGPTVILMAGLQGVGKTTACGKLALFCKKKGKSVMMVATDVYRPAAIDQLVTL 275
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QV VPV+ AG +++P++IAK+GL E KK+ +DV+IVDTAGRLQ+D+ MMDELK +K+V
Sbjct: 276 GKQVEVPVFEAGNQLRPAEIAKRGLAEGKKQGIDVIIVDTAGRLQVDRGMMDELKQIKQV 335
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTEVLLVVDAMTGQEAA LV +FN+EIGITGAILTKLDGDSRGGAALSVKEVS KPIK
Sbjct: 336 VNPTEVLLVVDAMTGQEAAGLVASFNLEIGITGAILTKLDGDSRGGAALSVKEVSNKPIK 395
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE M LEPFYPDRMA RILGMGDVL+FVEKAQEVM +EDAE MQK+IM A FDFN
Sbjct: 396 FVGEGEGMTALEPFYPDRMASRILGMGDVLTFVEKAQEVMVKEDAELMQKRIMEAKFDFN 455
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL QTR +ARMGSMS ++ +PGM K++P Q+REAEKSLKIME+MI +MTP+ER P+L
Sbjct: 456 DFLAQTRNLARMGSMSNIMKFLPGMNKVSPQQIREAEKSLKIMESMINSMTPKERADPDL 515
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LA+SP RR+RVA SG++++QVS LVAQLFQMRVRMK+L +M+GGS+P + LE+ +K
Sbjct: 516 LAKSPSRRRRVANGSGRSQEQVSALVAQLFQMRVRMKSLATMMQGGSIPGMEGLEEGMKG 575
Query: 421 EQKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGG 456
+KA PGTA+RKR Q + + + SP+G GG
Sbjct: 576 GRKAAPGTAKRKRSRGFASQLAE-SGAKSSPKGSGG 610
>gi|302761974|ref|XP_002964409.1| hypothetical protein SELMODRAFT_81276 [Selaginella moellendorffii]
gi|300168138|gb|EFJ34742.1| hypothetical protein SELMODRAFT_81276 [Selaginella moellendorffii]
Length = 494
Score = 636 bits (1640), Expect = e-180, Method: Compositional matrix adjust.
Identities = 313/456 (68%), Positives = 380/456 (83%), Gaps = 2/456 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++DIRRALLEADVSLPVVR+ V +++E+AVG G+IRGVRPDQQLVK+V DEL+ LMGG+
Sbjct: 37 LQDIRRALLEADVSLPVVRKLVGSIAEKAVGTGVIRGVRPDQQLVKVVYDELISLMGGQA 96
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ + F+ + PTVIL+AGLQGVGKTT KLA Y+KK+GKSCMLVA D+YRPAAI+QL+ L
Sbjct: 97 AHIEFSGTPPTVILMAGLQGVGKTTACGKLALYMKKKGKSCMLVATDIYRPAAIEQLITL 156
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QV VPV+ AGTE+ P +IAK+GL+EAK+K DV+IVDTAGRLQ+D MMDELK +K+V
Sbjct: 157 GKQVEVPVFEAGTELSPVEIAKRGLKEAKEKGTDVLIVDTAGRLQVDATMMDELKQMKKV 216
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
LNP EVLLVVDAMTGQEAAALV+ FN+E+GITGAI+TK+DGDSRGGAALSV+EVSGKPIK
Sbjct: 217 LNPNEVLLVVDAMTGQEAAALVSAFNLEVGITGAIMTKVDGDSRGGAALSVREVSGKPIK 276
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE M LE FYPDRMA RILGMGDVLSFVEKAQE M +EDAE+MQKKIM A +DFN
Sbjct: 277 FVGEGEGMNALELFYPDRMASRILGMGDVLSFVEKAQESMVKEDAEDMQKKIMEAKYDFN 336
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
D+LKQ +ARMGSM V+ +IPGM K+TP Q+REAE+SL I EAMI AMTPEERE PEL
Sbjct: 337 DYLKQLNALARMGSMGGVLKLIPGMNKVTPQQIREAERSLSIAEAMINAMTPEEREDPEL 396
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LA+SPVRRKRVA +SG+TE QV QL++QL+QMR +MKNL M+ G +P L +LE+ L
Sbjct: 397 LAKSPVRRKRVATESGRTEAQVGQLISQLYQMRAQMKNLAAKMQDGKMPGLEDLEE-LSK 455
Query: 421 EQKAPPGTARRKR-RSESRRQFVDPASTRPSPRGFG 455
K PPGTARRK+ +SE ++Q + + +P+GFG
Sbjct: 456 GAKLPPGTARRKKGKSELQKQLSAIGNKQSAPKGFG 491
>gi|302768411|ref|XP_002967625.1| hypothetical protein SELMODRAFT_169303 [Selaginella moellendorffii]
gi|300164363|gb|EFJ30972.1| hypothetical protein SELMODRAFT_169303 [Selaginella moellendorffii]
Length = 462
Score = 635 bits (1638), Expect = e-179, Method: Compositional matrix adjust.
Identities = 313/456 (68%), Positives = 380/456 (83%), Gaps = 2/456 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++DIRRALLEADVSLPVVR+ V +++E+AVG G+IRGVRPDQQLVK+V DEL+ LMGG+
Sbjct: 5 LQDIRRALLEADVSLPVVRKLVGSIAEKAVGTGVIRGVRPDQQLVKVVYDELISLMGGQA 64
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ + F+ + PTVIL+AGLQGVGKTT KLA Y+KK+GKSCMLVA D+YRPAAI+QL+ L
Sbjct: 65 AHIEFSGTPPTVILMAGLQGVGKTTACGKLALYMKKKGKSCMLVATDIYRPAAIEQLITL 124
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QV VPV+ AGTE+ P +IAK+GL+EAK+K DV+IVDTAGRLQ+D MMDELK +K+V
Sbjct: 125 GKQVEVPVFEAGTELSPVEIAKRGLKEAKEKGTDVLIVDTAGRLQVDATMMDELKQMKKV 184
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
LNP EVLLVVDAMTGQEAAALV+ FN+E+GITGAI+TK+DGDSRGGAALSV+EVSGKPIK
Sbjct: 185 LNPNEVLLVVDAMTGQEAAALVSAFNLEVGITGAIMTKVDGDSRGGAALSVQEVSGKPIK 244
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE M LE FYPDRMA RILGMGDVLSFVEKAQE M +EDAE+MQKKIM A +DFN
Sbjct: 245 FVGEGEGMNALELFYPDRMASRILGMGDVLSFVEKAQESMMKEDAEDMQKKIMEAKYDFN 304
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
D+LKQ +ARMGSM V+ +IPGM K+TP Q+REAE+SL I EAMI AMTPEERE PEL
Sbjct: 305 DYLKQLNALARMGSMGGVLKLIPGMNKVTPQQIREAERSLSIAEAMINAMTPEEREDPEL 364
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LA+SPVRRKRVA +SG+TE QV QL++QL+QMR +MKNL M+ G +P L +LE+ L
Sbjct: 365 LAKSPVRRKRVATESGRTEAQVGQLISQLYQMRAQMKNLAARMQDGKMPGLEDLEE-LSK 423
Query: 421 EQKAPPGTARRKR-RSESRRQFVDPASTRPSPRGFG 455
K PPGTARRK+ +SE ++Q + + +P+GFG
Sbjct: 424 GAKLPPGTARRKKGKSELQKQLSAIGNKQSAPKGFG 459
>gi|62733121|gb|AAX95238.1| signal recognition particle protein, putative [Oryza sativa
Japonica Group]
Length = 1072
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 322/453 (71%), Positives = 364/453 (80%), Gaps = 49/453 (10%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVK-------------- 46
MRDIRRALLEADVSLPVVRRFV ++SE+A+G LIRGVRP+QQLVK
Sbjct: 101 MRDIRRALLEADVSLPVVRRFVSSISEKALGSDLIRGVRPEQQLVKTNLCAFSTGQITYS 160
Query: 47 ---IVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCML 103
IV DELVKLMGGEVS+LVFAKS PTVILLAGLQ
Sbjct: 161 VVQIVHDELVKLMGGEVSDLVFAKSGPTVILLAGLQ------------------------ 196
Query: 104 VAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGR 163
DVYRPAAIDQL ILGEQVGVPVY+ GTE KP+QI K +EEAK+KN+D +++DTAGR
Sbjct: 197 ---DVYRPAAIDQLTILGEQVGVPVYSEGTEAKPAQITKNAVEEAKRKNIDAIVMDTAGR 253
Query: 164 LQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDS 223
LQIDK+MM ELK+VK+ +NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDS
Sbjct: 254 LQIDKSMMVELKEVKKAVNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDS 313
Query: 224 RGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQE 283
RGGAALSVKEVSGKPIK VGRGERMEDLE FYPDRMA R+LGMGDVLSFVEKAQEVM+QE
Sbjct: 314 RGGAALSVKEVSGKPIKFVGRGERMEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVMRQE 373
Query: 284 DAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIM 343
DA E+QKKIMSA FDFNDFLKQ++ VA+MGSMSRV+GMIPGM K+TPAQ+REAEK L +
Sbjct: 374 DAVELQKKIMSAKFDFNDFLKQSQNVAKMGSMSRVVGMIPGMNKVTPAQIREAEKRLAFV 433
Query: 344 EAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 403
E+MI AMT EEREKPELLAES RR RVA++SGK+EQ+VSQLVAQLFQMR +M+ LMGVM
Sbjct: 434 ESMINAMTAEEREKPELLAESRDRRIRVAEESGKSEQEVSQLVAQLFQMRAQMQKLMGVM 493
Query: 404 EGG-SLPALSNLEDALKSEQKAPPGTARRKRRS 435
G +LP + NL ++L +++K RRKR S
Sbjct: 494 TGQEALPGMGNLMESLNADEKG----WRRKRGS 522
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 281/439 (64%), Positives = 326/439 (74%), Gaps = 75/439 (17%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVR F+++V+E+AVG +IRGV+P+QQLVK
Sbjct: 560 MRDIRRALLEADVSLPVVRSFIESVTEKAVGTDVIRGVKPEQQLVK-------------- 605
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L+ QGKSCML+A DVYRPAAIDQL IL
Sbjct: 606 -------------------------------TSLRLQGKSCMLIAADVYRPAAIDQLTIL 634
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QVGVPVY+ GTE KPSQIAK G++EAK K DV+IVDTAGRLQ+DKAMM ELK+VKR
Sbjct: 635 GKQVGVPVYSEGTEAKPSQIAKNGIKEAKSKKTDVIIVDTAGRLQVDKAMMSELKEVKRA 694
Query: 181 LNPTEVLLVVDAMTGQEAA--------------ALVTTFNIEIGITGAILTKLDGDSRGG 226
+NPTEVLLVVDAMTGQEAA ALV+TFN+EIGITGAILTKLDGDSRGG
Sbjct: 695 VNPTEVLLVVDAMTGQEAAFALRLTRISFLIWPALVSTFNVEIGITGAILTKLDGDSRGG 754
Query: 227 AALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAE 286
AALS+KEVSGKPIK VGRGERMEDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+QEDAE
Sbjct: 755 AALSIKEVSGKPIKFVGRGERMEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDAE 814
Query: 287 EMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAM 346
E+QKKI+SA F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK ME+M
Sbjct: 815 ELQKKILSAKFNFNDFLKQTQAIAQMGSFSRIIGMIPGMNKVTPAQIREAEKNLKFMESM 874
Query: 347 IEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
I MTPEERE+PELLAES RR RVA++SGK E+Q +MG M+G
Sbjct: 875 INVMTPEERERPELLAESRERRIRVAKESGKNERQ----------------KMMGAMQGQ 918
Query: 407 SLPALSNLEDALKSEQKAP 425
P + L D++K+E++AP
Sbjct: 919 DTPDMEGLMDSIKAEEQAP 937
>gi|238009706|gb|ACR35888.1| unknown [Zea mays]
gi|413916133|gb|AFW56065.1| hypothetical protein ZEAMMB73_792527 [Zea mays]
Length = 351
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 255/339 (75%), Positives = 298/339 (87%)
Query: 102 MLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTA 161
MLVA DVYRPAAIDQL ILG++VGVPVY+ GTE KPSQIAK GL+EAK DV+IVDTA
Sbjct: 1 MLVAADVYRPAAIDQLTILGKKVGVPVYSEGTEAKPSQIAKNGLKEAKVNKADVIIVDTA 60
Query: 162 GRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDG 221
GRLQ+DKAMM+ELK+VK+ +NPTEVLLVVDAMTGQEAA LV++FN EIGITGAILTKLDG
Sbjct: 61 GRLQVDKAMMNELKEVKKAVNPTEVLLVVDAMTGQEAAGLVSSFNDEIGITGAILTKLDG 120
Query: 222 DSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQ 281
DSRGGAALSVKEVSGKPIK VG+GER+EDLEPFYPDRMA RILGMGDVLSFVEKAQEVM+
Sbjct: 121 DSRGGAALSVKEVSGKPIKFVGQGERIEDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMR 180
Query: 282 QEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLK 341
QEDA+E+QKKI+SA F+FNDFLKQT+ +A+MGS SR+IGMIPGM K+TPAQ+REAEK+LK
Sbjct: 181 QEDADELQKKILSAKFNFNDFLKQTQMIAKMGSFSRLIGMIPGMNKVTPAQIREAEKNLK 240
Query: 342 IMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
ME+MI MT EERE+PELLAES RRKRVA+DSGKTEQQVSQLVAQLFQMR +M+ +MG
Sbjct: 241 FMESMINVMTLEERERPELLAESRERRKRVAKDSGKTEQQVSQLVAQLFQMRAKMQKMMG 300
Query: 402 VMEGGSLPALSNLEDALKSEQKAPPGTARRKRRSESRRQ 440
M+G P + L ++K+E+++ GT RR+R+ + RQ
Sbjct: 301 AMQGKESPDMDELMGSMKAEEQSAAGTGRRRRKYGNLRQ 339
>gi|158337260|ref|YP_001518435.1| signal recognition particle protein [Acaryochloris marina
MBIC11017]
gi|158307501|gb|ABW29118.1| signal recognition particle protein [Acaryochloris marina
MBIC11017]
Length = 476
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/393 (60%), Positives = 305/393 (77%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F++ V E A+G +I GV+PDQQ +KIV D+LV++MG
Sbjct: 31 LREVRRALLEADVNLQVVKDFIEEVRESALGAEVITGVQPDQQFIKIVHDQLVEIMGATN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L + PTVIL+AGLQG GKTT +AKLA +L+KQ ++ +LVA D+YRPAAIDQLV L
Sbjct: 91 EPLAESNKPPTVILMAGLQGTGKTTATAKLALHLRKQEQTSLLVATDIYRPAAIDQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV+ GT+ P +IA+QGL A+++NVD VIVDTAGRLQID MM EL D+K+
Sbjct: 151 GEQIDVPVFQLGTDANPVEIARQGLAAAREQNVDTVIVDTAGRLQIDPEMMSELADIKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAALS++++SGKPIK
Sbjct: 211 IKPDETLLVVDAMTGQEAANLTQTFHDQIGITGAILTKMDGDTRGGAALSIRQISGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQKKIM A FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDIADAEKMQKKIMEAQFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ V+ +IPGM KI+ +Q++E E LK EAMI +MT EER+ P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGVMKLIPGMNKISNSQLQEGETKLKQTEAMINSMTKEERKNPQL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
L+ SP RR+R+A+ SG T+ V +LV + +MR
Sbjct: 391 LSNSPSRRRRIAKGSGYTQNDVGKLVTEFQRMR 423
>gi|443656730|ref|ZP_21131781.1| signal recognition particle protein [Microcystis aeruginosa
DIANCHI905]
gi|159027605|emb|CAO86977.1| ffh [Microcystis aeruginosa PCC 7806]
gi|443333355|gb|ELS47919.1| signal recognition particle protein [Microcystis aeruginosa
DIANCHI905]
Length = 478
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/399 (59%), Positives = 308/399 (77%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V +QA+G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKGFIAEVEKQALGAEVISGVNPGQQFIKIVYDELVKIMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAIDQL+ L
Sbjct: 91 VPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL +K++
Sbjct: 151 GQQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKKI 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAALSV+++SG+PIK
Sbjct: 211 VNPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEERANPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA+SP RR+R+A+ SG E +V++L+A +MR M+ +
Sbjct: 391 LAKSPNRRRRIAKGSGHPETEVTKLIANFTRMRTMMQQM 429
>gi|359457209|ref|ZP_09245772.1| signal recognition particle protein [Acaryochloris sp. CCMEE 5410]
Length = 476
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/393 (60%), Positives = 306/393 (77%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ FV+ V E A+G +I GV+PDQQ +KIV D+LV++MG
Sbjct: 31 LKEVRRALLEADVNLQVVKDFVEDVRESALGAEVITGVQPDQQFIKIVHDQLVEIMGATN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L + PTVIL+AGLQG GKTT +AKLA +L+KQ ++ +LVA D+YRPAAIDQLV L
Sbjct: 91 EPLAESNKPPTVILMAGLQGTGKTTATAKLALHLRKQEQTSLLVATDIYRPAAIDQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV+ GT+ P +IA+QGL A+++NVD VIVDTAGRLQID MM EL D+K+
Sbjct: 151 GEQIDVPVFQLGTDANPVEIARQGLAAAREQNVDTVIVDTAGRLQIDPEMMSELADIKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAALS++++SGKPIK
Sbjct: 211 IKPDETLLVVDAMTGQEAANLTQTFHDQIGITGAILTKMDGDTRGGAALSIRQISGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQKKIM A FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDIADAEKMQKKIMEAQFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ V+ +IPGMGKI+ +Q++E E L+ EAMI +MT EER+ P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGVMKLIPGMGKISNSQLQEGETKLQQTEAMINSMTKEERKNPQL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
L+ SP RR+R+A+ SG T+ V +LV + +MR
Sbjct: 391 LSNSPSRRRRIAKGSGYTQNDVGKLVTEFQRMR 423
>gi|440756742|ref|ZP_20935942.1| signal recognition particle protein [Microcystis aeruginosa
TAIHU98]
gi|440172771|gb|ELP52255.1| signal recognition particle protein [Microcystis aeruginosa
TAIHU98]
Length = 478
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 239/399 (59%), Positives = 307/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V +QA+G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKGFIAEVEKQALGAEVISGVNPGQQFIKIVYDELVKIMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAIDQL+ L
Sbjct: 91 VPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL +K++
Sbjct: 151 GKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKKI 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+++SG+PIK
Sbjct: 211 VNPDDTLLVVDAMTGQEAANLTHTFHQQIGITGAILTKLDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEERANPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA+SP RR+R+A+ SG E +VS+L+A +MR M+ +
Sbjct: 391 LAKSPNRRRRIAKGSGHPETEVSKLIANFTRMRTMMQQM 429
>gi|425447198|ref|ZP_18827189.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9443]
gi|389732320|emb|CCI03740.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9443]
Length = 478
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/399 (59%), Positives = 308/399 (77%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V +QA+G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKGFIAEVEKQALGAEVISGVNPGQQFIKIVYDELVKIMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAIDQL+ L
Sbjct: 91 VPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL +K++
Sbjct: 151 GKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKKI 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAALSV+++SG+PIK
Sbjct: 211 VNPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEERANPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA+SP RR+R+A+ SG E +V++L+A +MR M+ +
Sbjct: 391 LAKSPNRRRRIAKGSGHPETEVTKLIANFTRMRTMMQQM 429
>gi|425437780|ref|ZP_18818194.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9432]
gi|425462607|ref|ZP_18842080.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9808]
gi|389677199|emb|CCH93837.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9432]
gi|389824313|emb|CCI26812.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9808]
Length = 478
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 239/399 (59%), Positives = 307/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V +QA+G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKGFIAEVEKQALGAEVISGVNPGQQFIKIVYDELVKIMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAIDQL+ L
Sbjct: 91 VPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL +K++
Sbjct: 151 GKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKKI 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+++SG+PIK
Sbjct: 211 VNPDDTLLVVDAMTGQEAANLTHTFHQQIGITGAILTKLDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEERANPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA+SP RR+R+A+ SG E +VS+L+A +MR M+ +
Sbjct: 391 LAKSPNRRRRIAKGSGHPETEVSKLIANFTRMRTMMQQM 429
>gi|425454517|ref|ZP_18834254.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9807]
gi|389804798|emb|CCI15909.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9807]
Length = 478
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/399 (59%), Positives = 308/399 (77%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V +QA+G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKGFIAEVEKQALGAEVISGVNPGQQFIKIVYDELVKIMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAIDQL+ L
Sbjct: 91 VPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL +K++
Sbjct: 151 GKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELGQIKKI 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAALSV+++SG+PIK
Sbjct: 211 VNPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEERANPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA+SP RR+R+A+ SG E +V++L+A +MR M+ +
Sbjct: 391 LAKSPNRRRRIAKGSGHPETEVTKLIANFTRMRSMMQQM 429
>gi|425451260|ref|ZP_18831082.1| Signal recognition particle protein [Microcystis aeruginosa PCC
7941]
gi|389767641|emb|CCI07099.1| Signal recognition particle protein [Microcystis aeruginosa PCC
7941]
Length = 478
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/399 (59%), Positives = 306/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V +QA+G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKGFIAEVEKQALGAEVISGVNPGQQFIKIVYDELVKIMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAIDQL+ L
Sbjct: 91 VPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL +K++
Sbjct: 151 GKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKKI 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+++SG+PIK
Sbjct: 211 VKPDDTLLVVDAMTGQEAANLTHTFHQQIGITGAILTKLDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEERANPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA+SP RR+R+A+ SG E +VS+L+A +MR M+ +
Sbjct: 391 LAKSPNRRRRIAKGSGHPETEVSKLIANFTRMRSMMQQM 429
>gi|422301683|ref|ZP_16389048.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9806]
gi|425440580|ref|ZP_18820878.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9717]
gi|389718934|emb|CCH97164.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9717]
gi|389789195|emb|CCI14703.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9806]
Length = 478
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/399 (59%), Positives = 307/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V +QA+G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKGFIAEVEKQALGAEVISGVNPGQQFIKIVYDELVKIMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAIDQL+ L
Sbjct: 91 VPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL +K++
Sbjct: 151 GKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKKI 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAALSV+++SG+PIK
Sbjct: 211 VKPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEERANPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA+SP RR+R+A+ SG E +V++L+A +MR M+ +
Sbjct: 391 LAKSPNRRRRIAKGSGHPETEVTKLIANFTRMRSMMQQM 429
>gi|428773330|ref|YP_007165118.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium stanieri PCC 7202]
gi|428687609|gb|AFZ47469.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium stanieri PCC 7202]
Length = 483
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/399 (59%), Positives = 305/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+ VV+ FV V + A+G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LQEVRRALLEADVNFQVVKSFVAEVEKNALGAEVISGVNPQQQFIKIVYDELVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A+ PTVIL+AGLQG GKTT +AKLA YL+KQ +SC++VA DVYRPAAIDQL+ L
Sbjct: 91 VPLAKAEKAPTVILMAGLQGTGKTTATAKLALYLQKQKRSCLMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ +PV+ G++ P +IA+QG+ A+++ +D VI+DTAGRLQID+ MM EL +K
Sbjct: 151 GEQIKIPVFELGSDANPVEIARQGVVSAQEQGIDTVIIDTAGRLQIDQEMMGELSQIKST 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP EVLLVVDAMTGQEAA L TF+ EIGITGAILTK+DGDSRGGAALSV+ +SGKPIK
Sbjct: 211 VNPDEVLLVVDAMTGQEAANLTRTFHEEIGITGAILTKMDGDSRGGAALSVRTISGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E LEPFYPDRMA RIL MGD++S VEKAQE + D E+MQ+K+M A FDFN
Sbjct: 271 FIGVGEKVEALEPFYPDRMASRILNMGDIVSLVEKAQEELDIGDVEKMQRKMMEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS + V+ +IPGM KI + + E LKI E++I +MT +ERE PEL
Sbjct: 331 DFLKQMRLLKNMGSFAGVMKLIPGMNKIGAGALEKGESQLKITESIINSMTKQERENPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA+SP RR+R+AQ SG E++VS+L++ +MR M+ +
Sbjct: 391 LAKSPSRRRRIAQGSGHQEKEVSRLISDFTRMRSMMQQM 429
>gi|166368109|ref|YP_001660382.1| signal recognition particle protein [Microcystis aeruginosa
NIES-843]
gi|166090482|dbj|BAG05190.1| signal recognition particle protein [Microcystis aeruginosa
NIES-843]
Length = 478
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/399 (59%), Positives = 306/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V +QA+G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKGFIAEVEKQALGAEVISGVNPGQQFIKIVYDELVKIMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAIDQL+ L
Sbjct: 91 VPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL +K++
Sbjct: 151 GKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKKI 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAALSV+++SG+PIK
Sbjct: 211 VKPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEERANPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA+SP RR+R+A+ SG E +V++L+ +MR M+ +
Sbjct: 391 LAKSPNRRRRIAKGSGHPETEVTKLITNFTRMRSMMQQM 429
>gi|425470966|ref|ZP_18849826.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9701]
gi|389883283|emb|CCI36344.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9701]
Length = 478
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/399 (59%), Positives = 306/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V +QA+G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKGFIAEVEKQALGAEVISGVNPGQQFIKIVYDELVKIMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAIDQL+ L
Sbjct: 91 VPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL +K++
Sbjct: 151 GKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKKI 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAALSV+++SG+PIK
Sbjct: 211 VKPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEERANPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA+SP RR+R+A+ SG E +V++L+ +MR M+ +
Sbjct: 391 LAKSPNRRRRIAKGSGHPETEVNKLITNFTRMRSMMQQM 429
>gi|332705584|ref|ZP_08425660.1| signal recognition particle subunit FFH/SRP54 [Moorea producens 3L]
gi|332355376|gb|EGJ34840.1| signal recognition particle subunit FFH/SRP54 [Moorea producens 3L]
Length = 479
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/410 (59%), Positives = 311/410 (75%), Gaps = 4/410 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL ADV+L VV+ FV V +A G + GVRPDQQ +KIV DELV++MG
Sbjct: 31 LKEVRRALLSADVNLQVVKDFVAEVEAKAQGSEVTSGVRPDQQFIKIVYDELVQVMGETN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A + PTV+L+AGLQG GKTT SAKLA +L+KQ +SC+LVA DVYRPAAIDQLV L
Sbjct: 91 VPLAQADTPPTVVLMAGLQGTGKTTASAKLALHLRKQERSCLLVATDVYRPAAIDQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE P +IA+QG+E AK +D VI+DTAGRLQID+ MM EL +K
Sbjct: 151 GQQIDVPVFELGTEADPVEIARQGVERAKAMAIDTVIIDTAGRLQIDQEMMGELSRIKET 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P + LLVVDAMTGQEAA L TF+ +IGITGAIL+KLDGDSRGGAALSV+++SG+PIK
Sbjct: 211 VQPHDTLLVVDAMTGQEAATLTRTFHEQIGITGAILSKLDGDSRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+K++ A FDF+
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDIADAEQMQQKMLEAKFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ ++PGMGK++ +Q+++ E LK EAMI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGLMKLVPGMGKLSSSQLQQGETKLKQSEAMISSMTSEERRNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPA 410
LA SP RR+R+AQ SG TE+ V LV++ RM++LM M G +PA
Sbjct: 391 LASSPSRRRRIAQGSGHTEKDVRGLVSEF----TRMRSLMQQMGQGQMPA 436
>gi|425464792|ref|ZP_18844102.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9809]
gi|389833087|emb|CCI22684.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9809]
Length = 478
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/399 (59%), Positives = 305/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V +QA+G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKGFIAEVEKQALGAEVISGVNPGQQFIKIVYDELVKIMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAIDQL+ L
Sbjct: 91 VPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM EL +K++
Sbjct: 151 GKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKKI 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+++SG+PIK
Sbjct: 211 VKPDDTLLVVDAMTGQEAANLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEERANPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA+SP RR+R+A+ SG E +V++L+ +MR M+ +
Sbjct: 391 LAKSPNRRRRIAKGSGHPETEVTKLITNFTRMRSMMQQM 429
>gi|390437797|ref|ZP_10226315.1| Signal recognition particle protein [Microcystis sp. T1-4]
gi|389838790|emb|CCI30439.1| Signal recognition particle protein [Microcystis sp. T1-4]
Length = 478
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/399 (58%), Positives = 306/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V +QA+G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKGFIAEVEKQALGAEVISGVNPGQQFIKIVYDELVKIMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA YL+KQ KSC++VA DVYRPAAIDQL+ L
Sbjct: 91 VPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P IA+QG+E+AK+ VD VI+DTAGRLQID MM +L +K++
Sbjct: 151 GKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGQLAQIKKI 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P + LLVVDAMTGQEAA+L TF+ +IGITGAILTKLDGD+RGGAALSV+++SG+PIK
Sbjct: 211 VKPDDTLLVVDAMTGQEAASLTNTFHQQIGITGAILTKLDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + EDA +MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEQLDLEDAAKMQAKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ V+ +IPG+GK++ + + EK LK EAMI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGVLKLIPGLGKLSGTDIEKGEKELKRTEAMINSMTTEERANPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA+SP RR+R+A+ SG E +V++L+ +MR M+ +
Sbjct: 391 LAKSPNRRRRIAKGSGHPETEVNKLITNFTRMRSMMQQM 429
>gi|427709147|ref|YP_007051524.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7107]
gi|427361652|gb|AFY44374.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7107]
Length = 491
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/399 (59%), Positives = 307/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V +A G +I GVRPDQQ +KIV DELV++MG E
Sbjct: 31 LREVRRALLEADVNLQVVKDFISEVEAKAQGAEVISGVRPDQQFIKIVYDELVQVMGEEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A+ +PTV+L+AGLQG GKTT +AKLA +L+K +SC+LVA D+YRPAAIDQL+ L
Sbjct: 91 IPLAEAEQKPTVVLMAGLQGTGKTTATAKLALHLRKLDRSCLLVATDIYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QGLE AK + V+ VI+DTAGRLQID+ MM EL +K
Sbjct: 151 GKQIDVPVFDLGSDADPVEIARQGLERAKAEGVNTVIIDTAGRLQIDEDMMAELARIKAT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV+++SG PIK
Sbjct: 211 VQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAALSVRQISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DAE+MQ+KI+SA FDF
Sbjct: 271 FVGIGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDLADAEQMQEKILSAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ MIPGMGK++ Q+++ E LK EAMI +MT +ER+ P+L
Sbjct: 331 DFLKQLRLLKNMGSLGGILKMIPGMGKLSDDQLKQGETQLKRCEAMINSMTKQERQDPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+RVA SG E +S+LV+ +MR M+ +
Sbjct: 391 LASSPSRRRRVASGSGYKEADISKLVSDFQKMRSLMQQM 429
>gi|254414856|ref|ZP_05028620.1| signal recognition particle protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196178345|gb|EDX73345.1| signal recognition particle protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 486
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/399 (58%), Positives = 306/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL ADV+L VV++FV V A+G +I GVRPDQQ +KIV DELV++MG
Sbjct: 31 LKEVRRALLSADVNLQVVKKFVADVETTAMGADVIAGVRPDQQFIKIVYDELVQVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A + PT++L+AGLQG GKTT +AKLA +L K+ +SC++VA DVYRPAAIDQLV L
Sbjct: 91 VPLAKADTSPTIVLMAGLQGTGKTTATAKLALHLGKENRSCLMVATDVYRPAAIDQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ +PV+ GT+ P +IA QG+ AK+ VD VI+DTAGRLQID MM EL +K
Sbjct: 151 GEQINIPVFEMGTDTNPVEIACQGVAHAKETGVDTVIIDTAGRLQIDAEMMAELAQIKDN 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVDAMTGQEAA L TFN +IGITGAILTKLDGD+RGGAALSV++VSG+PIK
Sbjct: 211 VKPDEVLLVVDAMTGQEAATLTHTFNQQIGITGAILTKLDGDTRGGAALSVRQVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DA +MQ+K+++A FDF+
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDMADAAQMQEKMLNAQFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ ++PGMGK++ Q+ + E LK EAMI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGLMKLMPGMGKLSSDQLEKGEGKLKQTEAMINSMTAEERRNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+R+A+ SG +E++VS L+++ +MR MK +
Sbjct: 391 LAGSPSRRRRIARGSGHSEREVSSLISEFTKMRSLMKQM 429
>gi|384245021|gb|EIE18517.1| signal recognition particle protein [Coccomyxa subellipsoidea
C-169]
Length = 489
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/417 (58%), Positives = 324/417 (77%), Gaps = 1/417 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IRRALLEADVSLPVVR+FV++V E A+G +++GVRPDQQLVK+V D+LV+LMGG+
Sbjct: 31 MREIRRALLEADVSLPVVRQFVKSVEETALGTKVLKGVRPDQQLVKVVNDQLVELMGGQQ 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+L K P VIL+AGLQGVGKTT KLA L+K+ K ++VA DVYRPAAIDQLV L
Sbjct: 91 QDLNDPKDGPQVILMAGLQGVGKTTACGKLALALQKRNKRVLMVATDVYRPAAIDQLVSL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE++ VPV+ GT+ KP++IA++GL +A+ ++ D +IVDTAGRLQID MM EL++V+
Sbjct: 151 GERINVPVFEMGTDAKPAEIARRGLAKARAEDFDAIIVDTAGRLQIDANMMSELREVQAT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P++ LLVVDAMTGQEAA LV FN ITGAILTK+DGDSRGGAALSVK VSGKPIK
Sbjct: 211 VQPSDTLLVVDAMTGQEAAGLVKAFNEAAEITGAILTKMDGDSRGGAALSVKAVSGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPFYPDR+A RILGMGDVL+ VEKA+ +++EDA E+ K+++SA FDFN
Sbjct: 271 FVGTGEKLEALEPFYPDRIASRILGMGDVLTLVEKAEASIKEEDAAEITKRMLSAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ + V+ MGSM +++ M+PGM +IT Q+ EAEK K+ EA+I +MTPEER P+L
Sbjct: 331 DFLKQYKMVSGMGSMGQIMKMLPGMNQITEKQLNEAEKQFKMFEALINSMTPEERTNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME-GGSLPALSNLED 416
LA++ RR+R+A+ +G+ E V+ ++ MR +M++L +M+ GG P + L D
Sbjct: 391 LAKTASRRRRIARGAGRIEVDVTNMIGTFGGMRAKMQSLSKMMKMGGGAPGMPQLSD 447
>gi|427730772|ref|YP_007077009.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7524]
gi|427366691|gb|AFY49412.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7524]
Length = 489
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/399 (59%), Positives = 306/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V +A G +I+GVRPDQQ +KIV DELV++MG E
Sbjct: 31 LREVRRALLEADVNLQVVKDFISEVEAKAQGAEVIKGVRPDQQFIKIVYDELVQVMGEEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L + +PT++L+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAIDQL+ L
Sbjct: 91 VPLTETEQKPTIVLMAGLQGTGKTTATAKLALHLRKLERSCLLVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+E AK + V+ VI+DTAGRLQID+ MM EL +K
Sbjct: 151 GKQIDVPVFELGSDADPVEIARQGVERAKAEGVNTVIIDTAGRLQIDEDMMAELARIKAT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV+++SG PIK
Sbjct: 211 VQPDETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAALSVRQISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+KI+SA FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEQMQEKILSAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ MIPGMGK++ Q+++ E LK E+MI +MT +ER P+L
Sbjct: 331 DFLKQLRLLKNMGSLGGILKMIPGMGKLSDDQLKQGETQLKRCESMINSMTAQERRDPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+R+A SG E V++LVA +MR M+ +
Sbjct: 391 LASSPNRRRRIANGSGYKEADVNKLVADFQKMRSLMQQM 429
>gi|427418338|ref|ZP_18908521.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7375]
gi|425761051|gb|EKV01904.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7375]
Length = 493
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/398 (59%), Positives = 307/398 (77%), Gaps = 1/398 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADVS VV+ FV V E+A G ++ GV PDQQ +KIV DELV LMG
Sbjct: 31 LREVRRALLEADVSFNVVKDFVVDVQEKAQGAEVVSGVAPDQQFIKIVYDELVALMGDAN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L +S+PTV+L+AGLQG GKTT SAKLA +L+KQ +S MLVA DVYRPAA+DQL+ L
Sbjct: 91 EPLADVESKPTVVLMAGLQGTGKTTASAKLALHLRKQERSAMLVATDVYRPAAVDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ P IAK G+ +A++ VD VIVDTAGRLQID+ MM EL+ +K
Sbjct: 151 GKQIKVPVFEMGTDANPVDIAKAGIAKAQEDGVDTVIVDTAGRLQIDQDMMAELEQIKTA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P EVLLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALS++++SGKPIK
Sbjct: 211 ISPDEVLLVVDAMTGQEAATLTQTFHEQIGITGAILTKMDGDSRGGAALSIRQISGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE++Q KI+ A FDFN
Sbjct: 271 FIGIGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEVDIADAEKLQAKILEARFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFLKQTR + MGS++ ++ +IPGM K++ Q+++ E L+ EAMI +MT +ERE P+
Sbjct: 331 DFLKQTRLMKNMGSLTGIMKLIPGMSNKLSADQLQQGETQLRRCEAMINSMTKQEREDPD 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
LLA SP RR+R+A+ SG ++ VS+LV+ +MR MK
Sbjct: 391 LLANSPGRRRRIAKGSGYNDKDVSKLVSDFQKMRSMMK 428
>gi|254421926|ref|ZP_05035644.1| signal recognition particle protein [Synechococcus sp. PCC 7335]
gi|196189415|gb|EDX84379.1| signal recognition particle protein [Synechococcus sp. PCC 7335]
Length = 491
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/409 (59%), Positives = 315/409 (77%), Gaps = 5/409 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEAD +L VV+ FV V E+A G ++ GVRPDQQ +KIV DELV+ MG
Sbjct: 31 LREVRRALLEADANLDVVKGFVADVKEKAQGADVVSGVRPDQQFIKIVYDELVETMGDTN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L ++++PTV+L+AGLQG GKTT SAKLA +L+KQ +S +LVA DVYRPAAIDQL+ L
Sbjct: 91 VPLADSENKPTVVLMAGLQGTGKTTASAKLALHLRKQERSALLVATDVYRPAAIDQLLTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G + P +IA+QGL++AK +D VI+DTAGRLQID MM EL VK V
Sbjct: 151 GKQIDVPVFEIGADANPVEIARQGLKKAKADGIDTVIIDTAGRLQIDTDMMAELAQVKEV 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P EVLLVVDAMTGQEAA L TF+ EIGITGAILTK+DGDSRGGAALSV+ +SG+PIK
Sbjct: 211 AQPDEVLLVVDAMTGQEAATLTRTFHDEIGITGAILTKMDGDSRGGAALSVRRISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE++Q+KI+SA FDFN
Sbjct: 271 FIGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEVDIADAEKLQEKILSAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFLKQTR + MGS++ ++ MIPGMG K++ Q+++ E+ LK EAMI +MT EER+ PE
Sbjct: 331 DFLKQTRLMKNMGSLAGIMKMIPGMGNKLSSDQLQQGEQQLKRCEAMINSMTMEERQNPE 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 408
+L+ SP RR+RVA+ +G E+ V +LV+ FQ RM+ LM M G++
Sbjct: 391 VLSGSPSRRRRVAKGAGYAEKDVGKLVSD-FQ---RMRGLMQQMGQGNM 435
>gi|119510257|ref|ZP_01629394.1| signal recognition particle protein [Nodularia spumigena CCY9414]
gi|119465106|gb|EAW46006.1| signal recognition particle protein [Nodularia spumigena CCY9414]
Length = 490
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/410 (58%), Positives = 310/410 (75%), Gaps = 4/410 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V +A G ++ GVRPDQQ +KIV DELV++MG E
Sbjct: 31 LREVRRALLEADVNLQVVKDFISEVETKAQGADVVAGVRPDQQFIKIVHDELVRVMGAEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L + +PT++L+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAIDQLV L
Sbjct: 91 VPLAETEEKPTIVLMAGLQGTGKTTATAKLALHLRKLERSCLLVATDVYRPAAIDQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+E AK + + VI+DTAGRLQID+ MM EL +K
Sbjct: 151 GKQIDVPVFELGSDADPVEIARQGVERAKAEGFNTVIIDTAGRLQIDEDMMGELARIKAT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVD+MTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+++SG PIK
Sbjct: 211 VQPHETLLVVDSMTGQEAANLTRTFHDKIGITGAILTKLDGDTRGGAALSVRQISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYP+RMA RILGMGDVLS VEKAQE DAE+MQ KI+SA FDFN
Sbjct: 271 FVGVGEKVEALQPFYPERMASRILGMGDVLSLVEKAQEEFDLADAEKMQDKILSAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF+KQ R + MGS+ ++ +IPGM KI+ Q+++ E LK E+MI +MT +ER+ P+L
Sbjct: 331 DFVKQLRMLKNMGSLGGIMKLIPGMNKISDEQLKQGETQLKRCESMINSMTRQERQDPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPA 410
LA SP RR+R+A+ SG E VS+LVA FQ +M+ LM M G +PA
Sbjct: 391 LASSPSRRRRIAKGSGYREPDVSKLVAD-FQ---KMRTLMQQMGQGQMPA 436
>gi|428317311|ref|YP_007115193.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
nigro-viridis PCC 7112]
gi|428240991|gb|AFZ06777.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
nigro-viridis PCC 7112]
Length = 482
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/399 (58%), Positives = 305/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V+ +A G ++ GVRPDQQ +KIV DELV++MG
Sbjct: 31 LKEVRRALLEADVNLQVVKNFIGEVAAKAQGAEVVSGVRPDQQFIKIVHDELVRVMGETN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A+S PTV+L+AGLQG GKTT +AKLA +L+KQ ++ +LVA D+YRPAAIDQL+ L
Sbjct: 91 VPLATAESGPTVVLMAGLQGTGKTTATAKLALHLRKQNRTALLVATDIYRPAAIDQLLTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G ++ P +IA+QG+E K+ +D +IVDTAGRLQID+ MM EL +K+
Sbjct: 151 GKQIDVPVFELGKDIDPVEIARQGIEHGKQIGIDTIIVDTAGRLQIDQDMMAELGRIKQT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV+++SG PIK
Sbjct: 211 VQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAALSVRQISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+K+++A FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDIADAEKMQQKMLTAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR + MGS+ ++ MIPGM K++ Q+R+ E LK EAMI +MT EER PEL
Sbjct: 331 DFLKQTRLLKNMGSLGGIMKMIPGMNKLSDEQMRQGEVQLKRTEAMINSMTVEERRNPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+R+ + +G E V++LV+ +MR M+ +
Sbjct: 391 LASSPSRRRRIGKGAGYAENDVTKLVSDFQKMRTMMQQM 429
>gi|428301996|ref|YP_007140302.1| signal recognition particle subunit FFH/SRP54 (srp54) [Calothrix
sp. PCC 6303]
gi|428238540|gb|AFZ04330.1| signal recognition particle subunit FFH/SRP54 (srp54) [Calothrix
sp. PCC 6303]
Length = 487
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/399 (58%), Positives = 304/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V +A G +I G++P+QQ +KIV DELVK+MG E
Sbjct: 31 LREVRRALLEADVNLQVVKDFINEVETKAQGAEVIAGIKPEQQFIKIVHDELVKVMGEEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A + PTV+L+AGLQG GKTT +AKLA +L+K ++C++VA DVYRPAAIDQL+ L
Sbjct: 91 VPLAQASTSPTVVLMAGLQGTGKTTATAKLALHLRKLNRTCLMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+ + K VD VI+DTAGRLQID+ MM EL +K
Sbjct: 151 GKQIEVPVFQLGSDADPVEIARQGIAQGKADGVDTVIIDTAGRLQIDQDMMAELAQIKAT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++SG+PIK
Sbjct: 211 VQPHEILLVVDSMTGQEAANLTRTFHDQIGITGAILTKMDGDSRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+KI+SA FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEKMQEKILSAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ +I MIPGM K+T Q+++ E LK EAMI +MT +ER P+L
Sbjct: 331 DFLKQLRLLKNMGSLGGIIKMIPGMNKLTDDQLKQGETQLKRCEAMINSMTQQERRDPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+RVA SG E VS+LV+ +MR M+ +
Sbjct: 391 LASSPSRRRRVAGGSGYKENDVSKLVSDFQRMRGMMQQM 429
>gi|334117488|ref|ZP_08491579.1| signal recognition particle protein [Microcoleus vaginatus FGP-2]
gi|333460597|gb|EGK89205.1| signal recognition particle protein [Microcoleus vaginatus FGP-2]
Length = 482
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/399 (58%), Positives = 304/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V+ +A G ++ GVRPDQQ +KIV DELV++MG
Sbjct: 31 LKEVRRALLEADVNLQVVKNFIGEVAAKAQGAEVVSGVRPDQQFIKIVHDELVRVMGETN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A S PTVIL+AGLQG GKTT +AKLA +L+KQ ++ +LVA D+YRPAAIDQL+ L
Sbjct: 91 VPLATADSGPTVILMAGLQGTGKTTATAKLALHLRKQNRTALLVATDIYRPAAIDQLLTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G ++ P +IA+QG+E K+ +D +IVDTAGRLQID+ MM EL +K+
Sbjct: 151 GKQIDVPVFELGKDIDPVEIARQGIEHGKQIGIDTIIVDTAGRLQIDQDMMAELGRIKQT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV+++SG PIK
Sbjct: 211 VQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAALSVRQISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+K+++A FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDIADAEKMQEKMLTAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR + MGS+ ++ MIPGM K++ Q+R+ E LK EAMI +MT EER PEL
Sbjct: 331 DFLKQTRLLKNMGSLGGIMKMIPGMNKLSDEQMRQGEVQLKRTEAMINSMTVEERRNPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+R+ + +G E V++LV+ +MR M+ +
Sbjct: 391 LASSPSRRRRIGKGAGYAENDVTKLVSDFQKMRTMMQQM 429
>gi|443321269|ref|ZP_21050328.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 73106]
gi|442789014|gb|ELR98688.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 73106]
Length = 481
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/411 (57%), Positives = 305/411 (74%), Gaps = 4/411 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D++RAL+ ADV+L VV+ FV V +A+G +I GV+PDQQ VKIV DELVK+MG
Sbjct: 31 LKDVKRALIAADVNLEVVKTFVNEVESKALGAEVISGVKPDQQFVKIVHDELVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA YL+KQ +SC++VA D+YRPAAI QL+ L
Sbjct: 91 VPLAQATQSPTVILMAGLQGTGKTTATAKLALYLQKQKRSCLMVATDIYRPAAIAQLLTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV+ GT+V P +IA+QG+ +AK+ VD VI+DTAGRLQID MM EL +KR
Sbjct: 151 GKQIDIPVFELGTQVNPVEIARQGVAKAKEMGVDTVIIDTAGRLQIDPEMMAELSQIKRA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P + LLVVDAMTGQEAA L TFN EIGITGAILTK+DGDSRGGAALSV+++SG+PIK
Sbjct: 211 TQPHDTLLVVDAMTGQEAANLTRTFNDEIGITGAILTKMDGDSRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPFYPDR+A RIL MGD+L+ VEKAQE + D E+M KI A FDFN
Sbjct: 271 FVGVGEKVEALEPFYPDRLASRILNMGDILTLVEKAQEELDIADLEKMHAKITEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ +IPGM K++ + + + E LK EAMI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGILKLIPGMNKLSNSDLAKGESQLKQTEAMINSMTKEERSNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
L++SP RR+R+A+ SG E+ +S+LV RM+++M M G +PAL
Sbjct: 391 LSKSPGRRRRIAKGSGFQEKDISKLVTDF----TRMRSMMQQMSSGGMPAL 437
>gi|113476149|ref|YP_722210.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Trichodesmium erythraeum IMS101]
gi|110167197|gb|ABG51737.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Trichodesmium erythraeum IMS101]
Length = 483
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/430 (56%), Positives = 318/430 (73%), Gaps = 9/430 (2%)
Query: 3 DIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSE 62
++RRALLEADV+L VV+ F+ VS +A G ++ GVRPDQQ +KIV DEL ++MG +
Sbjct: 33 EVRRALLEADVNLQVVKGFIAEVSSKAKGADVLTGVRPDQQFIKIVHDELAQIMGESNAP 92
Query: 63 LVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGE 122
L A PT++L+AGLQG GKTT SAKLA +L+K+ +S +LVA DVYRPAAIDQLV LG+
Sbjct: 93 LAKADQPPTIVLMAGLQGTGKTTASAKLALHLRKENRSALLVATDVYRPAAIDQLVTLGK 152
Query: 123 QVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLN 182
Q+ VPV+ GT++ P +IA++GLE+AK +D+VI+DTAGRLQID+ MM EL +K +
Sbjct: 153 QIDVPVFELGTDIDPVEIAQKGLEKAKADGIDIVIIDTAGRLQIDQDMMAELARIKAAVK 212
Query: 183 PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLV 242
P E LLVVDAMTGQEAA L TFN +IGITGAILTK+DGD+RGGAALSV+ +SG+PIK +
Sbjct: 213 PQETLLVVDAMTGQEAATLTRTFNDQIGITGAILTKMDGDTRGGAALSVRRISGQPIKFI 272
Query: 243 GRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDF 302
G GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE DAE+MQ+KI+SA FDF DF
Sbjct: 273 GVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEFDIADAEKMQEKILSAKFDFTDF 332
Query: 303 LKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLA 362
LKQTR + MGS+ ++ +IPGM KI+ ++++ E LK E+MI +MT +ER+ PELLA
Sbjct: 333 LKQTRLMKNMGSLGGIMKLIPGMNKISDDKLQQGETQLKRCESMINSMTRQERQNPELLA 392
Query: 363 ESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP-----ALSNLEDA 417
+SP RR+R+A SG E+ VS+LV+ FQ RM++LM M G L + +
Sbjct: 393 KSPSRRRRIAGGSGYAEKDVSKLVSD-FQ---RMRSLMQKMGQGDLSGMGMPGMPGMGMP 448
Query: 418 LKSEQKAPPG 427
KAPPG
Sbjct: 449 GMLGGKAPPG 458
>gi|282898237|ref|ZP_06306228.1| Signal recognition particle protein [Raphidiopsis brookii D9]
gi|281196768|gb|EFA71673.1| Signal recognition particle protein [Raphidiopsis brookii D9]
Length = 480
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/409 (59%), Positives = 311/409 (76%), Gaps = 4/409 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V +A G +I GVRPDQQ +KIV DELV++MG E
Sbjct: 31 LREVRRALLEADVNLQVVKDFIVDVENKAQGAEVISGVRPDQQFIKIVYDELVQVMGEEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A+ + TVIL+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAIDQLV L
Sbjct: 91 VPLAQAQDKTTVILMAGLQGTGKTTATAKLALHLRKTNRSCLLVATDVYRPAAIDQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QV VPV+ G++ P +IA+QG+E A+ + ++ VIVDTAGRLQID+ MM EL +K
Sbjct: 151 GKQVDVPVFEMGSDADPVEIARQGVERARNEGINTVIVDTAGRLQIDQDMMAELSRIKST 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++SG PIK
Sbjct: 211 IEPDETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAALSVRQISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+KI+SA FDF
Sbjct: 271 FIGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEKMQEKILSAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ +IPGM KI+ Q+++ E LK E+MI +MT +ER+ P+L
Sbjct: 331 DFLKQLRLMKNMGSLGGMMKLIPGMNKISDEQLKKGETQLKRCESMINSMTKKERKDPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 409
LA SP RRKR+A SG E VS+LV+ FQ +M++LM M G+ P
Sbjct: 391 LASSPSRRKRIASGSGYKESDVSKLVSD-FQ---KMRSLMQQMGQGNFP 435
>gi|428781665|ref|YP_007173451.1| signal recognition particle protein [Dactylococcopsis salina PCC
8305]
gi|428695944|gb|AFZ52094.1| signal recognition particle protein [Dactylococcopsis salina PCC
8305]
Length = 484
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/397 (59%), Positives = 304/397 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++IRR+LL ADV+L VV+ F+ V + A G +I GVRPDQQ +KIV DELVK+MG
Sbjct: 31 LQEIRRSLLSADVNLQVVKTFIADVEKAAQGADVISGVRPDQQFIKIVNDELVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A++ PT+IL+AGLQG GKTT +AKLA +L+KQ +S ++V DVYRPAAIDQL L
Sbjct: 91 VPLAQAETPPTIILMAGLQGTGKTTATAKLALHLRKQNRSALMVGTDVYRPAAIDQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV+ GTE P ++AKQG+E+AK +D VI+DTAGRLQID+ MM EL VK+
Sbjct: 151 GEQIDVPVFEMGTEANPVEVAKQGVEKAKTDGIDTVIIDTAGRLQIDQNMMGELIAVKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P EVLLVVDAMTGQEAA+L TF+ ++G+TGAILTKLDGD+RGGAALSV++VSG+PIK
Sbjct: 211 ISPHEVLLVVDAMTGQEAASLTDTFHQQVGVTGAILTKLDGDTRGGAALSVRQVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYP+RMA RILGMGDV+S VEKAQE + DAE MQ K++ A FDFN
Sbjct: 271 FIGVGEKVEALQPFYPERMASRILGMGDVVSLVEKAQEEIDMADAEAMQAKMLEARFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS ++ MIPGM K++ + + + E LK EAMI +MT +ERE+PEL
Sbjct: 331 DFLKQMRLLKNMGSFGSIMKMIPGMNKLSGSDIEKGETQLKRTEAMINSMTKQEREEPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
LA+SP RR+RV + SG E+ VS+LV +MR M+
Sbjct: 391 LAKSPGRRRRVGKGSGHQEKDVSKLVEDFRKMRSMMQ 427
>gi|427713289|ref|YP_007061913.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. PCC 6312]
gi|427377418|gb|AFY61370.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. PCC 6312]
Length = 480
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/393 (59%), Positives = 304/393 (77%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F++ V ++A+G ++ GVRPDQQ +KIV DELV +MG
Sbjct: 31 LREVRRALLEADVNLQVVKTFIEEVRQRALGAEVVAGVRPDQQFIKIVYDELVTVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA +L+K+ ++ +LVA D+YRPAAIDQL+ L
Sbjct: 91 VPLAQASQAPTVILMAGLQGAGKTTATAKLALHLRKENRTTLLVATDIYRPAAIDQLLTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV P +IA+QG+ + ++ VD VIVDTAGRLQID MM EL D+K+
Sbjct: 151 GKQINVPVFELGTEVNPVEIARQGIAKGRELGVDTVIVDTAGRLQIDADMMAELGDIKKT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVDAMTGQEAA L F+ +IGITGAILTK+DGD+RGGAALSV+++SG+PIK
Sbjct: 211 VTPDEVLLVVDAMTGQEAANLTQAFHEQIGITGAILTKMDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYPDR+A RILGMGDVL+ VEKAQE + DAE M +KI+ A FDFN
Sbjct: 271 FIGVGEKVEALQPFYPDRLASRILGMGDVLTLVEKAQEEVDLADAENMTRKILEAQFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR + MGS+ ++ +IPGMGKI+ Q+ + E LK E+MI +MT +ERE P+L
Sbjct: 331 DFLKQTRLLKNMGSLGGIMKLIPGMGKISNEQLEQGESQLKRAESMINSMTRQERENPQL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
LA SP R+KRVAQ SG + V++LV+ +MR
Sbjct: 391 LANSPSRKKRVAQGSGHKLEDVAKLVSDFQRMR 423
>gi|427716938|ref|YP_007064932.1| signal recognition particle subunit FFH/SRP54 (srp54) [Calothrix
sp. PCC 7507]
gi|427349374|gb|AFY32098.1| signal recognition particle subunit FFH/SRP54 (srp54) [Calothrix
sp. PCC 7507]
Length = 485
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/399 (58%), Positives = 301/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V +A G ++ GVRPDQQ +KIV DELVK+MG E
Sbjct: 31 LREVRRALLEADVNLQVVKDFISTVEAKAQGADVLAGVRPDQQFIKIVHDELVKVMGEEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A T++L+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAIDQL+ L
Sbjct: 91 VPLAEAAGETTIVLMAGLQGTGKTTATAKLALHLRKLERSCLLVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+E AK + ++ VI+DTAGRLQID+ MM EL +K
Sbjct: 151 GKQIDVPVFELGSDANPVEIARQGVERAKAEGINTVIIDTAGRLQIDEDMMAELARIKET 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVD+MTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++SG PIK
Sbjct: 211 VQPHETLLVVDSMTGQEAANLTRTFHDQIGITGAILTKMDGDSRGGAALSVRQISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+KI+SA FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQEKILSAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ +I MIPGM K++ Q+++ E LK EAMI +MT +ER P+L
Sbjct: 331 DFLKQLRMLKNMGSLGGLIKMIPGMNKLSDDQLKQGETQLKRCEAMINSMTRQERHDPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+R+A SG E VS+LVA +MR M+ +
Sbjct: 391 LASSPSRRRRIASGSGYRESDVSKLVADFQKMRSLMQQM 429
>gi|434392620|ref|YP_007127567.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 7428]
gi|428264461|gb|AFZ30407.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 7428]
Length = 484
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/399 (59%), Positives = 302/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V A G +I GVRPDQQ +KIV +ELV++MG
Sbjct: 31 LREVRRALLEADVNLQVVKDFIAEVESHAQGAEVIAGVRPDQQFIKIVYEELVQVMGETN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A+ PT++L+AGLQG GKTT +AKLA +L+K +SCM+VA DVYRPAAIDQLV L
Sbjct: 91 VPLAQAEQPPTIVLMAGLQGTGKTTATAKLALHLRKLERSCMMVATDVYRPAAIDQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+E AK + VD VI+DTAGRLQID+ MM EL +K
Sbjct: 151 GKQIEVPVFEMGSDANPVEIARQGVERAKAEGVDTVIIDTAGRLQIDQDMMAELAQIKET 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVDAMTGQEAA L TF+ EIGITGAILTKLDGDSRGGAALSV+++SG+PIK
Sbjct: 211 VQPHEVLLVVDAMTGQEAANLTRTFHDEIGITGAILTKLDGDSRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DA +MQ+KIM+A FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAAKMQEKIMAAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ +IPGM K++ Q+++ E LK EAMI +MT +ER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGIMKLIPGMNKLSEDQLKQGETQLKRAEAMINSMTAQERRDPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RRKR+A SG E V++LV +MR M+ +
Sbjct: 391 LASSPSRRKRIANGSGYKEADVNKLVGDFQKMRSLMQQM 429
>gi|282899599|ref|ZP_06307563.1| Signal recognition particle protein [Cylindrospermopsis raciborskii
CS-505]
gi|281195478|gb|EFA70411.1| Signal recognition particle protein [Cylindrospermopsis raciborskii
CS-505]
Length = 480
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/409 (58%), Positives = 312/409 (76%), Gaps = 4/409 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V +A G +I GVRPDQQ +KIV DELV++MG E
Sbjct: 31 LREVRRALLEADVNLQVVKDFIADVETKAQGAEVISGVRPDQQFIKIVYDELVQVMGEEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A+++ TV+L+AGLQG GKTT +AKLA +L+K +SC+LVA D+YRPAAIDQLV L
Sbjct: 91 VPLAEAQNQTTVVLMAGLQGTGKTTATAKLALHLRKTNRSCLLVATDIYRPAAIDQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+E A+ + ++ VIVDTAGRLQID+ MM EL +K
Sbjct: 151 GKQIDVPVFEMGSDADPVEIARQGVERARNEGINTVIVDTAGRLQIDQDMMAELSRIKST 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++SG PIK
Sbjct: 211 IEPDETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAALSVRQISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+KI+SA FDF
Sbjct: 271 FIGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEKMQEKILSARFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ V+ +IPGM KI+ Q+++ E LK E+MI +MT +ER+ P+L
Sbjct: 331 DFLKQLRLMKNMGSLGGVMKLIPGMNKISDEQLKQGETQLKRCESMISSMTKQERKDPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 409
LA SP RR+R+A SG E V++LV+ FQ +M++LM M G+ P
Sbjct: 391 LASSPSRRRRIASGSGYKESDVTKLVSD-FQ---KMRSLMQQMGQGNFP 435
>gi|443478735|ref|ZP_21068451.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Pseudanabaena biceps PCC 7429]
gi|443015940|gb|ELS30714.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Pseudanabaena biceps PCC 7429]
Length = 477
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/411 (58%), Positives = 314/411 (76%), Gaps = 5/411 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ FV+ +S+QA G +I GVRPDQQ +KIV DELV+ MG
Sbjct: 31 IREVRRALLEADVNLQVVKEFVEEISKQAQGADVIAGVRPDQQFIKIVYDELVRTMGEAN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A + PTVIL+AGLQG GKTT +AKLA +L+K ++ +LVA DVYRPAAIDQL+ L
Sbjct: 91 VPLAEANNAPTVILMAGLQGTGKTTATAKLALHLRKLDRTALLVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G + P +IA+QGL +AK+ V+ VI+DTAGRLQID+ MMDELK VK
Sbjct: 151 GKQINVPVFEMGADADPVEIARQGLAKAKELGVNTVIIDTAGRLQIDRDMMDELKRVKDT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVDAMTGQEAA L TF+ EIGITGAILTK+DGD+RGGAALSV+++SG+PIK
Sbjct: 211 IKPDEVLLVVDAMTGQEAATLTRTFHDEIGITGAILTKMDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DA +Q+KI+ A FDF+
Sbjct: 271 FIGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDFTDAANLQEKILKAQFDFD 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLK TR + MGS ++ M+PGM KI AQ++EAEK LK E+MI +MT +ER+ P+L
Sbjct: 331 DFLKNTRMMKNMGSFGGMLKMLPGM-KINDAQIQEAEKQLKRCESMISSMTKQERKDPDL 389
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
+A+SP R++R+A +G Q V++LVA FQ +M++LM M G +P
Sbjct: 390 IAKSPSRKQRIANGAGYKLQDVTKLVAD-FQ---KMRSLMQQMGQGKMPNF 436
>gi|428223265|ref|YP_007107435.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. PCC 7502]
gi|427996605|gb|AFY75300.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. PCC 7502]
Length = 470
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/397 (59%), Positives = 309/397 (77%), Gaps = 1/397 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEAD +L VV+ F ++++A G +I GVRPDQQ +KIV DELV++MG E
Sbjct: 31 IREVRRALLEADANLQVVKDFSDRLTQKAQGADVIAGVRPDQQFIKIVYDELVQVMGSEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A++ PTVIL+AGLQG GKTT SAKLA +L+K ++ +LVA D+YRPAAIDQL+ L
Sbjct: 91 APLAEAETAPTVILMAGLQGTGKTTASAKLALHLRKLNRTTLLVATDIYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ GT+ P +IA+QG+ AK + ++ VIVDTAGRLQID+ MM EL +K+
Sbjct: 151 GNQIDVPVFQLGTDANPVEIARQGVAHAKAEGINTVIVDTAGRLQIDETMMAELVQIKQA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+E+SG+PIK
Sbjct: 211 IAPHEVLLVVDAMTGQEAANLTRTFHDQIGITGAILTKLDGDTRGGAALSVREISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DAE++Q+KI+SA FDF+
Sbjct: 271 FVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEINIADAEKLQEKILSAKFDFD 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLK TR + MGS ++ M+PGM KI AQ++EAE LK EAMI +MT +ER+ P+L
Sbjct: 331 DFLKNTRMMKSMGSFGGLLKMLPGM-KINDAQIKEAENQLKRCEAMISSMTKQERQDPDL 389
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
LA+SP R++R+A+ SG Q V++LV+ +MR M+
Sbjct: 390 LAKSPSRKQRIAKGSGYQLQDVTKLVSDFQRMRTMMQ 426
>gi|284928857|ref|YP_003421379.1| signal recognition particle subunit FFH/SRP54 (srp54)
[cyanobacterium UCYN-A]
gi|284809316|gb|ADB95021.1| signal recognition particle subunit FFH/SRP54 (srp54)
[cyanobacterium UCYN-A]
Length = 494
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/399 (57%), Positives = 301/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ + + A+GV +I+GV P QQ +K+V +ELVK+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKDFIADIEKSAIGVKVIQGVNPGQQFIKVVYEELVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L A+S PTVIL+ GLQG GKTT +AKLA+YLKKQ +SC++VA D+YRPAAIDQL L
Sbjct: 91 SPLAKAESDPTVILMVGLQGTGKTTATAKLAHYLKKQKQSCLMVAADIYRPAAIDQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G + P IA QG+ +AK+ DVVI+DTAGRLQID+ MM EL +K
Sbjct: 151 GQQIEVPVFELGNQENPVNIALQGVNKAKEIEADVVIIDTAGRLQIDQGMMLELTQIKES 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP + LLVVDAMTGQEAA L TF+ +I ITG ILTK+DGD+RGGAALSV++VSG+PIK
Sbjct: 211 INPHDTLLVVDAMTGQEAANLAQTFHEKIKITGTILTKMDGDTRGGAALSVRKVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RIL MGD+L+ VEKAQE + D E++Q KI+ A FDFN
Sbjct: 271 FVGVGEKIEALQPFYPDRMASRILNMGDILTLVEKAQEEIDFSDMEQLQSKILDAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR + MGS S ++ M+PG+ KI + + E LK EAMI +MT EER+ P+L
Sbjct: 331 DFLKQTRLMKSMGSFSNILKMVPGLNKINTKDIEKGENELKRTEAMIGSMTLEERKDPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA+SP RR R+A+ SG +E ++S+L+ +MR M+ L
Sbjct: 391 LAKSPSRRYRIAKGSGYSETEISKLIKNFTRMRTMMQQL 429
>gi|17229444|ref|NP_485992.1| signal recognition particle protein [Nostoc sp. PCC 7120]
gi|17131042|dbj|BAB73651.1| signal recognition particle protein [Nostoc sp. PCC 7120]
Length = 490
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 234/399 (58%), Positives = 304/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V +A G +I GVRPDQQ +KIV DELV++MG E
Sbjct: 31 LREVRRALLEADVNLQVVKDFISEVEAKAQGAEVISGVRPDQQFIKIVYDELVQVMGEEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L + +PT++L+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAIDQL+ L
Sbjct: 91 VPLAEVEQKPTIVLMAGLQGTGKTTATAKLALHLRKLERSCLLVATDVYRPAAIDQLLTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+E AK + V+ VI+DTAGRLQID+ MM EL +K
Sbjct: 151 GKQIDVPVFELGSDADPVEIARQGVERAKAEGVNTVIIDTAGRLQIDEDMMAELARIKET 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVD+MTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++SG PIK
Sbjct: 211 VQPHETLLVVDSMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAALSVRQISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+KI+SA FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQEKILSAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF+KQ R + MGS+ ++ MIPGMGK++ Q+++ E LK EAMI +MT +ER P+L
Sbjct: 331 DFVKQLRMLKNMGSLGGLLKMIPGMGKLSDDQLKQGETQLKRCEAMINSMTMQERRDPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+R+A SG E V++LVA +MR M+ +
Sbjct: 391 LASSPNRRRRIASGSGYKEADVNKLVADFQKMRSLMQQM 429
>gi|186683137|ref|YP_001866333.1| signal recognition particle protein [Nostoc punctiforme PCC 73102]
gi|186465589|gb|ACC81390.1| signal recognition particle protein [Nostoc punctiforme PCC 73102]
Length = 488
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/399 (58%), Positives = 302/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V +A G ++ GVRPDQQ +KIV DELV++MG E
Sbjct: 31 LREVRRALLEADVNLQVVKDFISEVEAKAQGAEVVTGVRPDQQFIKIVHDELVEVMGEEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ A+ +PT++L+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAIDQL+ L
Sbjct: 91 VPIAEAQEKPTIVLMAGLQGTGKTTATAKLALHLRKLDRSCLLVATDVYRPAAIDQLLTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+E A+ + V+ VI+DTAGRLQID+ MM EL +K
Sbjct: 151 GKQIDVPVFELGSDADPVEIARQGVERARAEGVNTVIIDTAGRLQIDEDMMAELARIKAT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++SG PIK
Sbjct: 211 VQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAALSVRKISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+KI+SA FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQEKILSAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ I MIPGM K++ Q+++ E LK EAMI +MT +ER P+L
Sbjct: 331 DFLKQLRMLKNMGSLGGFIKMIPGMNKLSDDQLKQGETQLKRCEAMINSMTRQERHDPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+R+A SG E V++LV +MR M+ +
Sbjct: 391 LASSPSRRRRIAAGSGYRESDVTKLVGDFQKMRSLMQQM 429
>gi|434398063|ref|YP_007132067.1| signal recognition particle subunit FFH/SRP54 (srp54) [Stanieria
cyanosphaera PCC 7437]
gi|428269160|gb|AFZ35101.1| signal recognition particle subunit FFH/SRP54 (srp54) [Stanieria
cyanosphaera PCC 7437]
Length = 485
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/399 (58%), Positives = 301/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V ++A G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKNFIAEVEKEANGAEVISGVNPGQQFIKIVYDELVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PT+IL+AGLQG GKTT +AKLA YL+KQ ++C++VA DVYRPAAI+QL+ L
Sbjct: 91 VPLAQADKAPTIILMAGLQGTGKTTATAKLALYLQKQQQTCLMVATDVYRPAAINQLLTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ P +IA+QG+E+AK+ VD V++DTAGRLQID+ MM EL +K
Sbjct: 151 GKQINVPVFEMGTDANPVEIARQGIEKAKELGVDTVLIDTAGRLQIDQDMMAELAQIKET 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV++VSG+PIK
Sbjct: 211 VQPHDTLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAALSVRQVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPFYPDR+A RIL MGD+L+ VEKAQE + D E MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALEPFYPDRLASRILNMGDILTLVEKAQEEIDLADMENMQSKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ V+ +IPGM KI+ A +++ E LK EAMI +MT EE+ PEL
Sbjct: 331 DFLKQMRLLKNMGSLGGVLKLIPGMNKISGADLQKGETQLKRTEAMINSMTKEEKSNPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA+SP RR+RVA+ SG E VS+L+ +MR M+ +
Sbjct: 391 LAQSPSRRRRVAKGSGFEETDVSKLIKDFTRMRSLMQQM 429
>gi|75910555|ref|YP_324851.1| signal recognition particle subunit FFH/SRP54 (srp54) [Anabaena
variabilis ATCC 29413]
gi|75704280|gb|ABA23956.1| signal recognition particle subunit FFH/SRP54 (srp54) [Anabaena
variabilis ATCC 29413]
Length = 490
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/399 (58%), Positives = 304/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V +A G +I GVRPDQQ +KIV DELV++MG E
Sbjct: 31 LREVRRALLEADVNLQVVKDFISEVEAKAQGAEVISGVRPDQQFIKIVYDELVQVMGEEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L + +PT++L+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAIDQL+ L
Sbjct: 91 VPLAEVEQKPTIVLMAGLQGTGKTTATAKLALHLRKLERSCLLVATDVYRPAAIDQLLTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+E AK + V+ VI+DTAGRLQID+ MM EL +K
Sbjct: 151 GKQIDVPVFELGSDADPVEIARQGVERAKAEGVNTVIIDTAGRLQIDEDMMAELARIKET 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVD+MTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++SG PIK
Sbjct: 211 VQPHETLLVVDSMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAALSVRQISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+KI+SA FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQEKILSAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF+KQ R + MGS+ ++ MIPGMGK++ Q+++ E LK EAMI +MT +ER P+L
Sbjct: 331 DFVKQLRMLKNMGSLGGLLKMIPGMGKLSDDQLKQGETQLKRCEAMINSMTIQERRDPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+R+A SG E V++LVA +MR M+ +
Sbjct: 391 LASSPNRRRRIASGSGYKEADVNKLVADFQKMRSLMQQM 429
>gi|119488999|ref|ZP_01621934.1| Signal recognition particle protein [Lyngbya sp. PCC 8106]
gi|119454955|gb|EAW36098.1| Signal recognition particle protein [Lyngbya sp. PCC 8106]
Length = 480
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/399 (59%), Positives = 301/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALLEADV+L VV+ FV V EQA G + GVRP +Q VKIV DELVK+MG
Sbjct: 31 LKDVRRALLEADVNLQVVKEFVAEVGEQAQGSQVFSGVRPGEQFVKIVHDELVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A S PT++L+AGLQG GKTT +AKLA +L+K+ ++ ++VA DVYRPAAIDQL L
Sbjct: 91 VPLATADSPPTIVLMAGLQGTGKTTATAKLALHLRKENRTALMVATDVYRPAAIDQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+E AK + VD VI+DTAGRLQID+ MM EL +K V
Sbjct: 151 GQQIEVPVFELGSDADPVEIARQGVEYAKTQGVDTVIIDTAGRLQIDQDMMAELARIKAV 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P + LLVVDAMTGQEAA L TFN +IGI+GAILTKLDGDSRGGAALS++ +SG PIK
Sbjct: 211 VQPHDTLLVVDAMTGQEAATLTQTFNEQIGISGAILTKLDGDSRGGAALSIRRISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE DAE+MQ+KIM A FDF
Sbjct: 271 FVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEFDLADAEKMQQKIMEAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR + MGS+ + +IPGM KI+ Q+ + E+ LK EAMI +MT EER+ PE+
Sbjct: 331 DFLKQTRLMKNMGSLGGLAKLIPGMNKISKEQLEQGEQQLKRSEAMINSMTTEERKNPEV 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+R+A+ SG +E+ V +LV +MR M+ +
Sbjct: 391 LASSPSRRRRIAKGSGHSEKDVMRLVGDFQKMRGMMQQM 429
>gi|443312631|ref|ZP_21042247.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechocystis sp. PCC 7509]
gi|442777350|gb|ELR87627.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechocystis sp. PCC 7509]
Length = 482
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/444 (54%), Positives = 318/444 (71%), Gaps = 9/444 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V +A G ++ GVRPDQQ +KIV DEL+++MG
Sbjct: 31 LKEVRRALLEADVNLQVVKDFIAGVETKAQGAEVVSGVRPDQQFIKIVYDELLEVMGETN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PT++L+AGLQG GKTT +AKLA +LKK +SC+LVA D+YRPAAIDQLV L
Sbjct: 91 VPLAKADQAPTIVLMAGLQGTGKTTATAKLALHLKKINRSCLLVATDIYRPAAIDQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IAK+G+E+AK++ VD VI+DTAGRLQID MM EL +K
Sbjct: 151 GKQIQVPVFEMGSDADPVEIAKRGVEQAKEQGVDTVIIDTAGRLQIDVDMMGELARIKAA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV++VSG+PIK
Sbjct: 211 VQPQETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAALSVRQVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+K++SA FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEQMQQKMLSAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ MIPGM K+ Q+++ E LK EAMI++MT +ER+ P++
Sbjct: 331 DFLKQMRLLKNMGSLGGLMKMIPGMNKLNSDQLKQGETQLKRCEAMIKSMTTKERKDPDI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
LA SP RR+R+A SG E V++LV+ +MR M+ M G P + + +++
Sbjct: 391 LASSPSRRRRIAGGSGYKESDVAKLVSDFQKMRTMMQQ----MTQGGFPGMPGMFGGMEN 446
Query: 421 EQKAPPGTARRKRRSESRRQFVDP 444
P + R + DP
Sbjct: 447 -----PAAVGNRPAQAGWRGYSDP 465
>gi|428212117|ref|YP_007085261.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
acuminata PCC 6304]
gi|428000498|gb|AFY81341.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
acuminata PCC 6304]
Length = 476
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/389 (60%), Positives = 297/389 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+RD+RRALLEADV+L VV+ F+ V E+A+G ++ GVRPDQQ +KIV DELV++MG
Sbjct: 31 LRDVRRALLEADVNLQVVKAFIADVEEKALGAEVVSGVRPDQQFIKIVYDELVEVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A++ PTV+L+AGLQG GKTT +AKLA +L+KQ ++ +LVA D+YRPAAIDQL+ L
Sbjct: 91 VPLAQAETAPTVVLMAGLQGTGKTTATAKLALHLRKQNRTTLLVATDIYRPAAIDQLLTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ P +IA+QG++ A VD VIVDTAGRLQID MM EL +K
Sbjct: 151 GKQIDVPVFELGTDADPVEIARQGIQHAVAIGVDTVIVDTAGRLQIDADMMAELAQIKET 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TFN EIGITGAILTKLDGD+RGGAALSV+++SG+PIK
Sbjct: 211 IQPHETLLVVDAMTGQEAANLTRTFNDEIGITGAILTKLDGDTRGGAALSVRQLSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VE+A E + DAE+MQ+KI+ A FDFN
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVERAAEQVDLADAEKMQQKILQAQFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ MIPG+GKI+ Q+ + E LK EAMI +MT +ER P+L
Sbjct: 331 DFLKQMRLMKNMGSLGGLLKMIPGVGKISDDQLSKGESQLKSAEAMINSMTAQERVNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
LA SP RRKRVA+ SG + V++LV
Sbjct: 391 LAGSPSRRKRVARGSGHDDAAVTKLVTDF 419
>gi|411120536|ref|ZP_11392908.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Oscillatoriales cyanobacterium JSC-12]
gi|410709205|gb|EKQ66720.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Oscillatoriales cyanobacterium JSC-12]
Length = 487
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/408 (58%), Positives = 311/408 (76%), Gaps = 4/408 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ FV V +A G +I+GVRPDQQ V+IV ELV++MG
Sbjct: 31 VREVRRALLEADVNLQVVKDFVAGVERKAQGAEVIKGVRPDQQFVEIVYTELVQVMGETN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L + PT++L+AGLQG GKTT +AKLA +L+K+ +S MLVA DVYRPAAIDQL+ L
Sbjct: 91 SPLAEVEPAPTIVLMAGLQGTGKTTATAKLALHLRKENRSTMLVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G + P +IA+QG+E+AK ++ VI+DTAGRLQID+ MM EL +K
Sbjct: 151 GKQIDVPVFELGKDANPVEIARQGVEKAKADGINTVIIDTAGRLQIDQDMMAELAQIKEA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAALSV+++SG+PIK
Sbjct: 211 VQPHEVLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYPDRMA RILGMGDVL+ VEKA+E + +AE+MQ+KI+SA FDF
Sbjct: 271 FIGTGEKVEALQPFYPDRMASRILGMGDVLTLVEKAREEVDLVEAEKMQEKILSAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR + MGS+ ++ +IPGM KI+ Q+ + E LK E+MI +MTPEER+ P+L
Sbjct: 331 DFLKQTRLLKTMGSLGGIMKLIPGMNKISSDQLEKGESELKKAESMINSMTPEERKNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 408
LA SP RR+R+A+ SG E VS LV + FQ +M+N+M +M G
Sbjct: 391 LASSPSRRRRIARGSGYREADVSDLVNK-FQ---KMRNMMQMMGKGQF 434
>gi|428776938|ref|YP_007168725.1| signal recognition particle subunit FFH/SRP54 (srp54) [Halothece
sp. PCC 7418]
gi|428691217|gb|AFZ44511.1| signal recognition particle subunit FFH/SRP54 (srp54) [Halothece
sp. PCC 7418]
Length = 483
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/393 (59%), Positives = 300/393 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL ADV+L VV+ F+ V + A G ++ GVRPDQQ VKIV DELVK+MG
Sbjct: 31 LQEVRRALLSADVNLQVVKGFIADVEKAAEGAEVLSGVRPDQQFVKIVNDELVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A++ PTVIL+AGLQG GKTT +AKLA +L+KQ +S ++V DVYRPAAIDQL L
Sbjct: 91 VPLAEAETAPTVILMAGLQGTGKTTATAKLALHLRKQNRSALMVGTDVYRPAAIDQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV+ GTE P +AKQG+E+AK + +D V+VDTAGRLQID+ MM EL +K
Sbjct: 151 GEQIDVPVFEMGTEANPVDVAKQGIEKAKAEGIDTVLVDTAGRLQIDQDMMQELIAIKNE 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P EVLLVVDAMTGQEAA+L TF+ ++G+TGAILTKLDGD+RGGAALSV++VSG+PIK
Sbjct: 211 ISPHEVLLVVDAMTGQEAASLTDTFHQQVGVTGAILTKLDGDTRGGAALSVRQVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYP+RMA RILGMGDV+S VEKAQE + DAE MQ K++ A FDFN
Sbjct: 271 FIGVGEKVEALQPFYPERMASRILGMGDVVSLVEKAQEEIDMADAEAMQAKMLEARFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS V+ MIPGM K++ + + + E LK EAMI +MT +ERE+PEL
Sbjct: 331 DFLKQMRLLKNMGSFGSVMKMIPGMNKLSGSDIEKGETQLKRTEAMINSMTKQEREEPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
LA+SP RR+RV + SG E+ V +LV +MR
Sbjct: 391 LAKSPSRRRRVGKGSGHQEKDVVKLVNDFTKMR 423
>gi|257058483|ref|YP_003136371.1| signal recognition particle protein [Cyanothece sp. PCC 8802]
gi|256588649|gb|ACU99535.1| signal recognition particle protein [Cyanothece sp. PCC 8802]
Length = 492
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/393 (58%), Positives = 298/393 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+ ++RRALL ADV+L VV+ F+ V + A+G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LTEVRRALLAADVNLQVVKNFIADVEKAALGAEVISGVNPGQQFIKIVYDELVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L + PTVIL+AGLQG GKTT +AKLA YL+KQ +SC++VA D+YRPAAIDQL+ L
Sbjct: 91 VPLATTATAPTVILMAGLQGTGKTTATAKLALYLRKQKRSCLMVATDIYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G+E P IA+QG+E+AK+ VD V++DTAGRLQID++MM EL +K
Sbjct: 151 GQQIEVPVFELGSEANPVDIARQGVEKAKELGVDTVLIDTAGRLQIDESMMVELARIKEA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P + LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAALSV+++SG+PIK
Sbjct: 211 VKPDDTLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYPDRMA RIL MGD+LS VEKAQE + D E+MQ KI+ A FDFN
Sbjct: 271 FIGVGEKVEALQPFYPDRMASRILNMGDILSLVEKAQEEIDIADVEKMQSKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ MIPG+ K++ + + EK LK EAMI +MT EER+ P+L
Sbjct: 331 DFLKQMRLMKNMGSLGGLLKMIPGLNKLSSTDIEKGEKELKRTEAMINSMTVEERKNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
LA+SP RR+R+A+ SG E +VS+LV +MR
Sbjct: 391 LAKSPSRRRRIAKGSGHAESEVSKLVTNFTRMR 423
>gi|307151061|ref|YP_003886445.1| signal recognition particle protein [Cyanothece sp. PCC 7822]
gi|306981289|gb|ADN13170.1| signal recognition particle protein [Cyanothece sp. PCC 7822]
Length = 487
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/399 (56%), Positives = 302/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRAL+ ADV+L VV+ F+ V +QA+G +I GV P QQ +KIV D+LVK+MG
Sbjct: 31 LKEVRRALISADVNLQVVKNFIAEVEKQALGAEVISGVNPGQQFIKIVYDQLVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A + PTVIL+AGLQG GKTT +AKLA +L+K+ +SC++VA DVYRPAAIDQL+ L
Sbjct: 91 VPLAQASTPPTVILMAGLQGTGKTTATAKLALFLRKENRSCLMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE P +IA+QG+++AK+ VD VI+DTAGRLQID+ MM EL +K
Sbjct: 151 GQQIDVPVFELGTEADPVEIARQGVQKAKELGVDTVIIDTAGRLQIDEDMMAELARIKAT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P + LLVVD+MTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV++VSG+PIK
Sbjct: 211 VKPHDTLLVVDSMTGQEAATLTHTFHEQIGITGAILTKLDGDTRGGAALSVRQVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RIL MGD+++ VEKAQE + D E+MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILNMGDIITLVEKAQEELDLSDVEKMQSKILQAQFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ + + MGS+ ++ +IPGMGK++ A + + E LK E+MI +MT EER P+L
Sbjct: 331 DFLKQMKLLKNMGSLGGILKLIPGMGKLSGADIAKGETELKRTESMINSMTAEERTNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+R+A+ SG +E VS L+ +MR M+ +
Sbjct: 391 LASSPSRRRRIAKGSGHSESDVSALIKNFSRMRGMMQQM 429
>gi|428219543|ref|YP_007104008.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Pseudanabaena sp. PCC 7367]
gi|427991325|gb|AFY71580.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Pseudanabaena sp. PCC 7367]
Length = 472
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/407 (58%), Positives = 315/407 (77%), Gaps = 5/407 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+RD+RRALLEADV+L VV+ V + E+A+G +I GVRPDQQ +++V +ELV+LMG +
Sbjct: 31 IRDVRRALLEADVNLQVVKEVVDRIGEKALGTDVIAGVRPDQQFIQVVYNELVELMGTDN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L +++ PT+IL+AGLQG GKTT SAKLA L+KQ +S +LVA DVYRPAAIDQL+ L
Sbjct: 91 QPLAQSENSPTIILMAGLQGTGKTTASAKLALQLRKQERSALLVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ P +IAKQG+ +A+ + +D VIVDTAGRLQID+ MM EL +K
Sbjct: 151 GKQINVPVFQLGTDANPVEIAKQGVAQAQAEGIDTVIVDTAGRLQIDQDMMAELSQIKGA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P EVLLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+E+SG+PIK
Sbjct: 211 IDPDEVLLVVDAMTGQEAANLTQTFHDQIGITGAILTKLDGDTRGGAALSVREISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DAE++Q+KI+ A FDF+
Sbjct: 271 FVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDIADAEKLQEKILEARFDFD 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR + MGS ++ +IPGM KI+ Q+ +AE LK +E+MI +MT +ER+ P+L
Sbjct: 331 DFLKQTRMMKNMGSFGGIMKLIPGM-KISDDQLNQAETQLKRVESMISSMTKQERKDPDL 389
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 407
LA SP R++RVA+ +G Q V++LV+ FQ RM+ LM M G+
Sbjct: 390 LARSPGRKQRVAKGAGYKTQDVTKLVSD-FQ---RMRGLMQQMGQGN 432
>gi|428226672|ref|YP_007110769.1| signal recognition particle subunit FFH/SRP54 (srp54) [Geitlerinema
sp. PCC 7407]
gi|427986573|gb|AFY67717.1| signal recognition particle subunit FFH/SRP54 (srp54) [Geitlerinema
sp. PCC 7407]
Length = 482
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/399 (57%), Positives = 304/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ FV V E+A+G +I+G+RPDQ VK+V D+LV++MG
Sbjct: 31 IREVRRALLEADVNLQVVKDFVAEVQEKALGADVIKGLRPDQVFVKVVHDQLVEVMGSAN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L + P V+L+AGLQG GKTT +AKLA YL+K+ + ++VA DVYRPAA+DQL+ L
Sbjct: 91 APLASPDTPPAVVLMAGLQGTGKTTATAKLALYLRKENRKALMVATDVYRPAAVDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ P +IA++G+E ++ VDVV++DTAGRLQID++MM EL +K
Sbjct: 151 GKQIDVPVFEMGTQANPVEIARRGVERGRELGVDVVLIDTAGRLQIDQSMMAELAQIKET 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAALSV+ +SG+PIK
Sbjct: 211 VQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDARGGAALSVRRISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+KI+ A FDFN
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQEKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ VI +IPG+ KI+ Q+ + E LK E+MI +MT ER P+L
Sbjct: 331 DFLKQMRFLKNMGSLGSVIKLIPGLNKISSEQLEQGESQLKRAESMISSMTKAERRNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
L+ SP RR+RVA+ SG +E+ VS+LV+ +MR M+ +
Sbjct: 391 LSSSPSRRQRVAKGSGHSERDVSKLVSDFQRMRAMMQQM 429
>gi|218245446|ref|YP_002370817.1| signal recognition particle protein [Cyanothece sp. PCC 8801]
gi|218165924|gb|ACK64661.1| signal recognition particle protein [Cyanothece sp. PCC 8801]
Length = 492
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/393 (58%), Positives = 298/393 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+ ++RRALL ADV+L VV+ F+ V + A+G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LTEVRRALLAADVNLQVVKNFIADVEKAALGAEVISGVNPGQQFIKIVYDELVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L + PTVIL+AGLQG GKTT +AKLA YL+KQ +SC++VA D+YRPAAIDQL+ L
Sbjct: 91 VPLATTATAPTVILMAGLQGTGKTTATAKLALYLRKQKRSCLMVATDIYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G+E P IA+QG+E+AK+ VD V++DTAGRLQID++MM EL +K
Sbjct: 151 GQQIEVPVFELGSEANPVDIARQGVEKAKELGVDTVLIDTAGRLQIDESMMVELARIKEA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P + LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAALSV+++SG+PIK
Sbjct: 211 VKPDDTLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYPDRMA RIL MGD+LS VEKAQE + D E+MQ KI+ A FDFN
Sbjct: 271 FIGVGEKVEALQPFYPDRMASRILNMGDILSLVEKAQEEIDIADVEKMQSKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ MIPG+ K++ + + EK LK EAMI +MT EER+ P+L
Sbjct: 331 DFLKQMRLMKNMGSLGGLLKMIPGLNKLSSTDIEKGEKELKRTEAMINSMTVEERKNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
LA+SP RR+R+A+ SG E +VS+LV +MR
Sbjct: 391 LAKSPSRRRRIAKGSGHAESEVSKLVTNFTRMR 423
>gi|443324440|ref|ZP_21053193.1| signal recognition particle subunit FFH/SRP54 (srp54) [Xenococcus
sp. PCC 7305]
gi|442795959|gb|ELS05293.1| signal recognition particle subunit FFH/SRP54 (srp54) [Xenococcus
sp. PCC 7305]
Length = 489
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/397 (59%), Positives = 297/397 (74%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL ADV+L VV+ F+ + E+AVG ++ GV P QQ +KIV DELV +MG
Sbjct: 31 LKEVRRALLSADVNLQVVKNFIARIEEKAVGAEVLSGVNPGQQFIKIVYDELVAVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA YL+KQ +SC++V DVYRPAAIDQL+ L
Sbjct: 91 VPLAEADKPPTVILMAGLQGTGKTTATAKLALYLRKQQRSCLMVGTDVYRPAAIDQLLTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ P +IA+QGL +A++ +VD VIVDTAGRLQID MM EL +K
Sbjct: 151 GKQIDVPVFEMGTDADPVEIARQGLAKAREMSVDTVIVDTAGRLQIDSDMMGELAQIKET 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P +VLLVVD+MTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV++VSG+PIK
Sbjct: 211 IQPDDVLLVVDSMTGQEAANLTHTFHEQIGITGAILTKLDGDTRGGAALSVRQVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE DA +MQ KIM A FDFN
Sbjct: 271 FVGTGEKVEALEPFYPDRIASRILNMGDVLTLVEKAQEEFDLADAAQMQAKIMEARFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ V+ +IPGM K++ A + + E LK EAMI +MT ER +PEL
Sbjct: 331 DFLKQMRLLKNMGSLGGVMKLIPGMNKLSGADLEKGETQLKRTEAMINSMTKAERAEPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
LA+SP RR+RVA SG E+ VS+L+ +MR M+
Sbjct: 391 LAQSPSRRRRVASGSGFLERDVSKLIKDFTRMRSLMQ 427
>gi|126658775|ref|ZP_01729919.1| signal recognition particle protein [Cyanothece sp. CCY0110]
gi|126619873|gb|EAZ90598.1| signal recognition particle protein [Cyanothece sp. CCY0110]
Length = 488
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/389 (58%), Positives = 296/389 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V + A+G +I GV P QQL+KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKTFIADVEKAAIGAEVIAGVNPGQQLIKIVYDELVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A++ PTVIL+AGLQG GKTT +AKLA YL+KQ +S ++VA D+YRPAAIDQL+ L
Sbjct: 91 VPLAQAENAPTVILMAGLQGTGKTTATAKLALYLRKQQRSALMVATDIYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV+ G + P IA QG+E+AK+ +D VI+DTAGRLQID+ MM EL VK+
Sbjct: 151 GEQIDVPVFELGNQANPVDIATQGVEKAKEMGIDTVIIDTAGRLQIDEEMMLELSRVKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP + LLVVDAMTGQEAA L TF+ +IG+TGAILTK+DGD+RGGAALSV+++SG+PIK
Sbjct: 211 VNPDDTLLVVDAMTGQEAANLTRTFHDQIGVTGAILTKMDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RIL MGDVL+ VEKAQE + D E+MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILSMGDVLTLVEKAQEEIDLSDVEQMQSKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS ++ MIPGM K++ + + E LK EAMI +MT EER+ P+L
Sbjct: 331 DFLKQMRLMKNMGSFGSILKMIPGMNKLSTKDIEKGEGELKRTEAMISSMTLEERKNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
LA+SP RR+R+A+ SG E +VS+L+
Sbjct: 391 LAKSPNRRRRIAKGSGHPETEVSKLIKNF 419
>gi|16330898|ref|NP_441626.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|383322640|ref|YP_005383493.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325809|ref|YP_005386662.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491693|ref|YP_005409369.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436960|ref|YP_005651684.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|451815056|ref|YP_007451508.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|2500885|sp|P74214.1|SRP54_SYNY3 RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|1653392|dbj|BAA18306.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|339273992|dbj|BAK50479.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|359271959|dbj|BAL29478.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275129|dbj|BAL32647.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278299|dbj|BAL35816.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407961740|dbj|BAM54980.1| signal recognition particle protein [Bacillus subtilis BEST7613]
gi|451781025|gb|AGF51994.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
Length = 482
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/394 (57%), Positives = 301/394 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL ADV+L VV+ F++ V ++A+G +I GV P QQ +KIV DELV LMG
Sbjct: 31 LQEVRRALLAADVNLQVVKGFIKDVEQKALGADVISGVNPGQQFIKIVYDELVNLMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A+ PTVIL+AGLQG GKTT +AKLA YL+KQ +S ++VA DVYRPAAIDQL L
Sbjct: 91 VPLAQAEQAPTVILMAGLQGTGKTTATAKLALYLRKQKRSALMVATDVYRPAAIDQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+E+AK+ VD V++DTAGRLQID MM EL ++K+V
Sbjct: 151 GQQIDVPVFDLGSDANPVEIARQGVEKAKELGVDTVLIDTAGRLQIDPQMMAELAEIKQV 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+++SG+PIK
Sbjct: 211 VKPDDTLLVVDAMTGQEAANLTHTFHEQIGITGAILTKLDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDR+A RIL MGDVL+ VEKAQE + D E++Q KI+ A FDF+
Sbjct: 271 FVGVGEKVEALQPFYPDRLASRILNMGDVLTLVEKAQEAIDVGDVEKLQNKILEATFDFD 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF+KQ R + MGS+ ++ MIPGM K++ + + EK LK EAMI +MT EER+ P+L
Sbjct: 331 DFIKQMRFMKNMGSLGGLLKMIPGMNKLSSGDIEKGEKELKRTEAMISSMTTEERKNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRV 394
LA+SP RR+R+AQ SG +E VS+L+ +MR
Sbjct: 391 LAKSPSRRRRIAQGSGHSETDVSKLITNFTKMRT 424
>gi|428200946|ref|YP_007079535.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pleurocapsa
sp. PCC 7327]
gi|427978378|gb|AFY75978.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pleurocapsa
sp. PCC 7327]
Length = 486
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/399 (57%), Positives = 300/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ FV V ++A+G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LQEVRRALLEADVNLQVVKTFVAEVEKKALGAEVISGVNPGQQFIKIVYDELVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA YL+KQ ++C++VA DVYRPAAIDQL+ L
Sbjct: 91 VPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQNQTCLMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+ G+E AK+ +D V++DTAGRLQID+ MM EL +K
Sbjct: 151 GQQIDVPVFEMGSDADPVEIARAGVERAKEMGIDTVLIDTAGRLQIDRDMMAELARIKAT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP + LLVVDAMTGQEAA L TF +IGITGAILTKLDGD+RGGAALSV++VSG+PIK
Sbjct: 211 VNPHDTLLVVDAMTGQEAANLTRTFQEQIGITGAILTKLDGDTRGGAALSVRQVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RIL MGDVL+ VEKAQE + D E+MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILNMGDVLTLVEKAQEQIDIADVEKMQSKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ MIPG K++ + + + E LK EAMI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGLLKMIPGFNKLSGSDIEKGETELKRTEAMINSMTTEERANPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA+SP RR+R+A+ SG E V++LV+ +MR M+ +
Sbjct: 391 LAKSPNRRRRIARGSGYEESDVTKLVSNFTRMRNMMQQM 429
>gi|298490416|ref|YP_003720593.1| signal recognition particle protein ['Nostoc azollae' 0708]
gi|298232334|gb|ADI63470.1| signal recognition particle protein ['Nostoc azollae' 0708]
Length = 485
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/399 (57%), Positives = 303/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V +A G +I GVRPDQQ +KIV DELV++MG E
Sbjct: 31 LREVRRALLEADVNLQVVKDFISEVETKAQGAEVITGVRPDQQFIKIVYDELVQVMGEEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L + + T++L+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAI+QL+ L
Sbjct: 91 IPLAEVEGKTTIVLMAGLQGTGKTTATAKLALHLRKLNRSCLLVATDVYRPAAIEQLLTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+E A+ + ++ VIVDTAGRLQID+ MM EL +K
Sbjct: 151 GKQIDVPVFELGSDADPVEIARQGVEHARAEGINTVIVDTAGRLQIDQDMMAELSRIKST 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVD+MTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV+++SG PIK
Sbjct: 211 IEPDETLLVVDSMTGQEAANLTRTFHDQIGITGAILTKLDGDSRGGAALSVRQISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DAE+MQ+KI+SA FDF
Sbjct: 271 FVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDLADAEQMQEKILSAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ +IPGMGK++ Q+++ E LK EAMI +MT +ER P+L
Sbjct: 331 DFLKQLRLMKNMGSLGGIMKLIPGMGKLSDDQLKQGETQLKRCEAMINSMTKQERRNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+R+A +G E VS+LV +MR M+ +
Sbjct: 391 LASSPSRRRRIASGAGYRESDVSKLVGDFQKMRSLMQQM 429
>gi|172038385|ref|YP_001804886.1| signal recognition particle protein [Cyanothece sp. ATCC 51142]
gi|354554267|ref|ZP_08973572.1| signal recognition particle protein [Cyanothece sp. ATCC 51472]
gi|171699839|gb|ACB52820.1| signal recognition particle protein [Cyanothece sp. ATCC 51142]
gi|353553946|gb|EHC23337.1| signal recognition particle protein [Cyanothece sp. ATCC 51472]
Length = 489
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/389 (58%), Positives = 296/389 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V + A+G +I GV P QQL+KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKTFIADVEKAAIGAEVIAGVNPGQQLIKIVYDELVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A++ PTVIL+AGLQG GKTT +AKLA YL+KQ ++ ++VA D+YRPAAIDQLV L
Sbjct: 91 VPLAQAENAPTVILMAGLQGTGKTTATAKLALYLRKQQRTALMVATDIYRPAAIDQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV+ G + P IA QG+E+AK+ +D VI+DTAGRLQID+ MM EL VK+
Sbjct: 151 GEQIEVPVFELGNQANPVDIATQGVEKAKEMGIDTVIIDTAGRLQIDEEMMLELARVKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP + LLVVDAMTGQEAA L TF+ +IG+TGAILTK+DGD+RGGAALSV+++SG+PIK
Sbjct: 211 VNPDDTLLVVDAMTGQEAANLTRTFHDQIGVTGAILTKMDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RIL MGDVL+ VEKAQE + D E+MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILSMGDVLTLVEKAQEEIDLSDVEQMQSKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS ++ MIPGM K++ + + E LK EAMI +MT EER+ P++
Sbjct: 331 DFLKQMRLMKNMGSFGSILKMIPGMNKLSTKDIEKGEGELKRTEAMISSMTLEERKNPDI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
LA+SP RR+R+AQ SG E +VS+L+
Sbjct: 391 LAKSPSRRRRIAQGSGHPEAEVSKLIKNF 419
>gi|67924644|ref|ZP_00518055.1| Signal recognition particle protein [Crocosphaera watsonii WH 8501]
gi|416379090|ref|ZP_11683820.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Crocosphaera watsonii WH 0003]
gi|67853517|gb|EAM48865.1| Signal recognition particle protein [Crocosphaera watsonii WH 8501]
gi|357265970|gb|EHJ14666.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Crocosphaera watsonii WH 0003]
Length = 488
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/389 (58%), Positives = 295/389 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V + A+G +I GV P QQL+KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKTFIAEVEKAAIGAEVIAGVNPGQQLIKIVYDELVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A+ PTVIL+AGLQG GKTT +AKL+ YL+KQ ++C++VA D+YRPAAIDQL L
Sbjct: 91 VPLAQAEKSPTVILMAGLQGTGKTTATAKLSLYLRKQERTCLMVATDIYRPAAIDQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV+ GT+ P IA QG+ +AK+ +D VI+DTAGRLQID+ MM EL VK+
Sbjct: 151 GEQIEVPVFELGTQANPVDIATQGVAKAKEMGIDTVIIDTAGRLQIDEEMMLELARVKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP + LLVVDAMTGQEAA L TF+ +IG+TGAILTK+DGD+RGGAALSV+++SG+PIK
Sbjct: 211 VNPDDTLLVVDAMTGQEAANLTRTFHEQIGVTGAILTKMDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RIL MGDVL+ VEKAQE + D E+MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILSMGDVLTLVEKAQEEIDLSDVEQMQSKILEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS ++ MIPGM K++ + + E LK EAMI +MT EER+ P+L
Sbjct: 331 DFLKQMRLMKNMGSFGSILKMIPGMNKLSSTDIEKGEGELKRTEAMISSMTLEERKNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
LA+SP RR+R+A+ SG E +VS+L+
Sbjct: 391 LAKSPNRRRRIAKGSGHPEAEVSKLIKNF 419
>gi|218441087|ref|YP_002379416.1| signal recognition particle protein [Cyanothece sp. PCC 7424]
gi|218173815|gb|ACK72548.1| signal recognition particle protein [Cyanothece sp. PCC 7424]
Length = 488
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/399 (57%), Positives = 301/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRAL+ ADV+L VV+ FV V ++A+G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LKEVRRALISADVNLQVVKGFVAEVEKKALGAEVISGVNPGQQFIKIVYDELVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A + PTVIL+AGLQG GKTT +AKLA +L+K+ ++C++VA DVYRPAAIDQL+ L
Sbjct: 91 IPLAKASTPPTVILMAGLQGTGKTTATAKLALFLRKEKRTCLMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ P +IA+ G+E+AK+ VD VI+DTAGRLQID+ MM EL +K
Sbjct: 151 GQQIEVPVFEMGTDADPVEIARLGVEKAKELGVDTVIIDTAGRLQIDQDMMGELARIKAT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV++VSG+PIK
Sbjct: 211 VKPDDTLLVVDAMTGQEAATLTHTFHEQIGITGAILTKLDGDTRGGAALSVRQVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYP+RMA RIL MGDVL+ VEKAQE + D E+MQ KI+ A FDFN
Sbjct: 271 FVGVGEKVEALQPFYPERMASRILNMGDVLTLVEKAQEELDLSDVEKMQSKILQAQFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ +IPGMGK++ + + + E LK E+MI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGLLKLIPGMGKLSGSDIAKGETELKRTESMINSMTKEERANPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+R+A+ SG +E VS L+ +MR MK +
Sbjct: 391 LASSPGRRRRIAKGSGHSESDVSNLIKNFTRMRAMMKQM 429
>gi|354565512|ref|ZP_08984687.1| signal recognition particle protein [Fischerella sp. JSC-11]
gi|353549471|gb|EHC18913.1| signal recognition particle protein [Fischerella sp. JSC-11]
Length = 486
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/399 (58%), Positives = 301/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V +A G +I GVRPDQQ +KIV DELV++MG
Sbjct: 31 LREVRRALLEADVNLQVVKEFISEVEAKAQGAEVIAGVRPDQQFIKIVYDELVQVMGETN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
LV A++ PT++L+AGLQG GKTT +AKLA +L+K ++C++VA DVYRPAAI+QLV L
Sbjct: 91 VPLVQAQNPPTIVLMAGLQGTGKTTATAKLALHLRKIDRTCLMVATDVYRPAAIEQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+ G+E + + D VI+DTAGRLQID MM EL +K V
Sbjct: 151 GKQIDVPVFEMGSDADPVEIARLGVERGRAEKFDTVIIDTAGRLQIDADMMAELARIKEV 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV+ +SG PIK
Sbjct: 211 VQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDSRGGAALSVRRISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+KI++A FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQEKILAAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ +IPGM K++ Q+++ E LK EAMI +MT EER+ P+L
Sbjct: 331 DFLKQLRLLKNMGSLGGILKLIPGMNKLSSDQLQQGETQLKRCEAMINSMTQEERKNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+R+A SG E VS+LV+ +MR M+ +
Sbjct: 391 LASSPSRRRRIAGGSGYKEADVSKLVSDFQKMRSLMQQM 429
>gi|428770653|ref|YP_007162443.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium aponinum PCC 10605]
gi|428684932|gb|AFZ54399.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium aponinum PCC 10605]
Length = 480
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/389 (59%), Positives = 291/389 (74%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++R+ALLEADV+ VV+ FV V + A+G +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LQEVRKALLEADVNFQVVKSFVAEVEKNALGAEVISGVNPQQQFIKIVYDELVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A P V+L+AGLQG GKTT +AKLA YL+KQ +SC++VA DVYRPAAI QL+ L
Sbjct: 91 APLAEADKPPRVVLMAGLQGAGKTTATAKLALYLQKQKRSCLMVATDVYRPAAIQQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ GT P IA+QGLEEAK K +D VI+DTAGRLQID+ MM EL VK
Sbjct: 151 GTQISVPVFELGTGANPVDIARQGLEEAKNKGIDTVIIDTAGRLQIDQEMMAELAQVKDA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP EVLLVVD+MTGQEAA + +F+ EIGITGAILTK+DGDSRGGAALS++ +SG+PIK
Sbjct: 211 VNPDEVLLVVDSMTGQEAANVTRSFHEEIGITGAILTKMDGDSRGGAALSIRTISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E LEPFYPDRMA RIL MGD+++ VEKAQE + D E+MQKK+M A FDFN
Sbjct: 271 FIGVGEKVEALEPFYPDRMASRILNMGDIVTLVEKAQEELDIADVEKMQKKMMEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS + V+ +IPGM K+ + + E LK E MI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSFAGVMKLIPGMNKLGAGALEQGEVQLKRTETMINSMTKEERANPQL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
LA+SP RR+RVA+ SG E+ VS+LV+
Sbjct: 391 LAQSPSRRRRVAKGSGHQEKDVSRLVSDF 419
>gi|443316813|ref|ZP_21046243.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 6406]
gi|442783601|gb|ELR93511.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 6406]
Length = 494
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/400 (60%), Positives = 310/400 (77%), Gaps = 1/400 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V QA+G +I G+ P QQ +KIV DELVKLMG
Sbjct: 31 LREVRRALLEADVNLQVVKTFIAEVQNQALGAEVITGINPGQQFIKIVNDELVKLMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L A S PTV+L+AGLQG GKTT +AKLA +L+K+ ++ +LVA DVYRPAA+DQL+ L
Sbjct: 91 SPLAQADSGPTVVLMAGLQGTGKTTAAAKLALHLRKEKRTTLLVATDVYRPAAVDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ P IA+QGLE+A++ +VD VIVDTAGRLQID AMM EL +K V
Sbjct: 151 GKQIDVPVFDLGTDANPVDIARQGLEKARELDVDTVIVDTAGRLQIDPAMMAELAQIKAV 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVDAMTGQEAA L TF+ EIGITGAILTK+DGD+RGGAALSV+++SG+PIK
Sbjct: 211 IQPHEVLLVVDAMTGQEAANLTRTFHEEIGITGAILTKMDGDARGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + D E++QKKI+ A FDFN
Sbjct: 271 FIGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEAVDIADVEKLQKKIIEAKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF+KQ R + MGS ++ +IPGM GKI+ Q+++ E LK +EAMI +MT ER++PE
Sbjct: 331 DFIKQMRLMKTMGSFGGILKLIPGMAGKISDEQLQQGEVQLKRVEAMIGSMTKSERQQPE 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LL+ SP RR+R+AQ SG E+ VS+LV+ +MR M+ +
Sbjct: 391 LLSSSPSRRRRIAQGSGYQEKDVSKLVSDFQKMRSMMQQM 430
>gi|423062554|ref|ZP_17051344.1| signal recognition particle subunit SRP54 [Arthrospira platensis
C1]
gi|406715889|gb|EKD11041.1| signal recognition particle subunit SRP54 [Arthrospira platensis
C1]
Length = 471
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/399 (57%), Positives = 298/399 (74%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F++ V QA G ++ GV+P QQ +KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLMVVKDFIKEVGVQAQGSQVVSGVKPGQQFIKIVHDELVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A+ PT++L+AGLQG GKTT SAKLA +L+K+ +S +LVA DVYRPAAIDQL+ L
Sbjct: 91 VPLAEAQQPPTIVLMAGLQGTGKTTASAKLALHLQKENRSSLLVATDVYRPAAIDQLMTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G + P +IA+QG+E K + +D +I+DTAGRLQID+ MM EL +K
Sbjct: 151 GKQINVPVFELGKDADPVEIARQGIEYGKAQGIDTIIIDTAGRLQIDQNMMAELAQIKET 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TFN IGITGAILTK+DGDSRGGAALS++ VSG PIK
Sbjct: 211 VQPHETLLVVDAMTGQEAATLTQTFNDRIGITGAILTKMDGDSRGGAALSIRRVSGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYP+RMA RILGMGD+L+ VEKAQE DAE+MQ+KI+ A FDF
Sbjct: 271 FVGVGEKVEALQPFYPERMASRILGMGDILTLVEKAQEEFDIADAEKMQEKILEAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR + MGS+ ++ +IPGM KI+ Q+ E LK EAMI +MT EER+ PEL
Sbjct: 331 DFLKQTRLMKNMGSLGGLVKLIPGMNKISQEQLDAGESQLKRSEAMINSMTIEERKNPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
L+ SP RRKRVA+ +G E+ V +LV+ +MR M+ +
Sbjct: 391 LSNSPSRRKRVAKGAGYAEKDVMRLVSDFQRMRSLMQQM 429
>gi|22299516|ref|NP_682763.1| signal recognition particle protein [Thermosynechococcus elongatus
BP-1]
gi|22295699|dbj|BAC09525.1| signal recognition particle protein [Thermosynechococcus elongatus
BP-1]
Length = 469
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/399 (58%), Positives = 307/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L V + F++ V ++A+G +I GVRPDQQ +KIV D LV++MG
Sbjct: 31 LREVRRALLEADVNLQVAKDFIENVRQRAIGAEVIAGVRPDQQFIKIVYDALVEVMGESH 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L + PT+IL+AGLQG GKTT +AKLA +L+K+G+S +LVA DVYRPAAIDQL+ L
Sbjct: 91 SPLAHVEPPPTIILMAGLQGTGKTTATAKLALHLRKEGRSTLLVATDVYRPAAIDQLMTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GVPV+ GTEV P +IA+QG+ +AK+ VD VI+DTAGRLQID MM EL +K
Sbjct: 151 GKQIGVPVFEMGTEVSPVEIARQGVAKAKELGVDTVIIDTAGRLQIDAEMMAELAAIKEG 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L F+ ++GITGAILTKLDGD+RGGAALSV++VSG+PIK
Sbjct: 211 VQPHETLLVVDAMTGQEAANLTRAFHEQVGITGAILTKLDGDTRGGAALSVRQVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYPDR+A RILGMGDVL+ VEKAQE + DAE+M +KI+ A FDF+
Sbjct: 271 FIGVGEKVEALQPFYPDRLASRILGMGDVLTLVEKAQEEVDLADAEKMSRKILEAQFDFD 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS++ +I +IPGM KI+ Q+++ E+ LK EAMI +MT EER PEL
Sbjct: 331 DFLKQLRLLKNMGSLAGIIKLIPGMNKISTEQLQQGEQQLKRAEAMINSMTREERRNPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+RVA+ SG V++LV+ +MR M+ +
Sbjct: 391 LASSPSRRERVAKGSGYQVADVTKLVSDFQRMRSLMQQM 429
>gi|427733956|ref|YP_007053500.1| signal recognition particle subunit FFH/SRP54 (srp54) [Rivularia
sp. PCC 7116]
gi|427368997|gb|AFY52953.1| signal recognition particle subunit FFH/SRP54 (srp54) [Rivularia
sp. PCC 7116]
Length = 481
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/399 (56%), Positives = 300/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RR+LLEADV+L V++ F+ V +A G ++ GVRP +Q +KIV DELV +MG
Sbjct: 31 LREVRRSLLEADVNLQVIKEFISEVEAKAQGAEVLNGVRPGEQFIKIVHDELVNVMGETN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
LV A+ PT++L+AGLQG GKTT +AKLA +L+K ++C++VA DVYRPAAIDQL+ L
Sbjct: 91 VPLVQAEESPTIVLMAGLQGTGKTTATAKLALHLRKLERNCLMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+E AK + +D VI+DTAGRLQID+ MM EL VK
Sbjct: 151 GKQIDVPVFELGSDANPVEIARQGVERAKAEGIDTVIIDTAGRLQIDEDMMAELASVKET 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ +IGI+GAILTKLDGDSRGGAALSV+ +SG PIK
Sbjct: 211 VQPHETLLVVDAMTGQEAANLTRTFHEKIGISGAILTKLDGDSRGGAALSVRRISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+M +K++SA FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMTEKMLSAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ MIPGM KI+ Q+ + + L+ EAMI++MT +ER P+L
Sbjct: 331 DFLKQLRLLKNMGSLGGIMKMIPGMNKISNEQLEQGQSQLQRCEAMIKSMTKQERTDPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+R+A SG E+ VS+L++ +MR M+ +
Sbjct: 391 LASSPSRRRRIASGSGYKEKDVSKLISDFQKMRNMMQQM 429
>gi|170078230|ref|YP_001734868.1| signal recognition particle protein [Synechococcus sp. PCC 7002]
gi|169885899|gb|ACA99612.1| signal recognition particle protein [Synechococcus sp. PCC 7002]
Length = 478
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/394 (58%), Positives = 302/394 (76%), Gaps = 1/394 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V + AVG +I GV P QQ +KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKGFISDVEKAAVGAEVISGVNPGQQFIKIVYDELVKIMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A+++P+VIL+AGLQG GKTT +AKL+ YL+KQ K+ ++VA DVYRPAAIDQL L
Sbjct: 91 VPLAEAENKPSVILMAGLQGTGKTTATAKLSLYLRKQNKTALMVATDVYRPAAIDQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV+ G++ P IAKQG+E+AK+ VDVV+VDTAGRLQID MM ELK +K
Sbjct: 151 GEQIDVPVFDLGSDANPVDIAKQGVEKAKELGVDVVLVDTAGRLQIDADMMAELKQIKES 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP + LLVVD+MTGQEAA+L TF+ EIG+TGAILTK+DGD+RGGAALSV+ +SG+PIK
Sbjct: 211 INPDDTLLVVDSMTGQEAASLTRTFHEEIGVTGAILTKMDGDTRGGAALSVRMISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E LEPFYPDR+A RIL MGDVL+ VEKAQE + D EEMQ K++ A FDF+
Sbjct: 271 FIGVGEKVEALEPFYPDRLASRILNMGDVLTLVEKAQEAVDLSDVEEMQAKLLEARFDFD 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFLKQ R + MGS+ ++ +IPGMG KI + + E LK +E MI +MT EER+ P+
Sbjct: 331 DFLKQMRLLKNMGSLGGMLKLIPGMGNKIDKNMLEQGEVQLKRVETMINSMTKEERKNPD 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
+LA++P RR R+A+ SG +E+ VS+L+A +MR
Sbjct: 391 VLAQTPKRRTRIAKGSGLSEKDVSKLIADFTRMR 424
>gi|2500884|sp|Q55311.1|SRP54_SYNE7 RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|1279743|emb|CAA63054.1| signal sequence binding protein [Synechococcus elongatus PCC 7942]
Length = 485
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/380 (59%), Positives = 298/380 (78%), Gaps = 1/380 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V E+AVG +I G+RPDQQ +K+V DELV++MG
Sbjct: 31 LKEVRRALLEADVNLGVVKEFIAQVQEKAVGTQVISGIRPDQQFIKVVYDELVQVMGETH 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA +L+K+G+S +LVA DVYRPAAIDQL+ L
Sbjct: 91 VPLAQAAKAPTVILMAGLQGAGKTTATAKLALHLRKEGRSTLLVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+E+A+++ +D VIVDTAGRLQID MM+EL VK
Sbjct: 151 GKQIDVPVFELGSDANPVEIARQGVEKARQEGIDTVIVDTAGRLQIDTEMMEELAQVKEA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA+L +F+ IGITGAILTKLDGDSRGGAALS++ VSG+PIK
Sbjct: 211 IAPHEVLLVVDSMIGQEAASLTRSFHERIGITGAILTKLDGDSRGGAALSIRRVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PF+P+RMA RILGMGDVL+ VEKAQE + D E+MQ+KI++A FDF
Sbjct: 271 FVGLGEKVEALQPFHPERMASRILGMGDVLTLVEKAQEEIDLADVEKMQEKILAAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFLKQ R + MGS++ I +IPG+ GKI Q+R+ E+ LK +EAMI +MTP+ER P+
Sbjct: 331 DFLKQMRLLKNMGSLAGFIKLIPGLGGKINDEQLRQGERQLKRVEAMINSMTPQERRDPD 390
Query: 360 LLAESPVRRKRVAQDSGKTE 379
LL+ SP RR R+A+ G+TE
Sbjct: 391 LLSNSPSRRHRIAKGCGQTE 410
>gi|220909384|ref|YP_002484695.1| signal recognition particle protein [Cyanothece sp. PCC 7425]
gi|219865995|gb|ACL46334.1| signal recognition particle protein [Cyanothece sp. PCC 7425]
Length = 489
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/399 (57%), Positives = 309/399 (77%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F++ V +A+G +I G+RPDQQ +KIV DELV++MG
Sbjct: 31 LREVRRALLEADVNLQVVKDFIEEVRVKALGAEVIAGIRPDQQFIKIVYDELVQVMGETN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A++ PT++L+AGLQG GKTT +AKLA +L+KQ +S +LVA D+YRPAAIDQLV L
Sbjct: 91 APLAEAETAPTIVLMAGLQGTGKTTAAAKLALHLRKQNRSALLVATDIYRPAAIDQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV P +IA+QG+E + NVD VIVDTAGRLQID MM EL +K
Sbjct: 151 GKQIDVPVFQLGTEVNPVEIARQGVEHGRSLNVDTVIVDTAGRLQIDPEMMAELAQIKTT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGD+RGGAALSV+++SG+PIK
Sbjct: 211 IAPQETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDTRGGAALSVRQISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYPDR+A R+LGMGDVL+ VEKAQE + DAE++ +KI+ A FDF
Sbjct: 271 FIGVGEKVEALQPFYPDRLASRVLGMGDVLTLVEKAQEEVDLADAEKLSRKILEAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR + MGS+ ++ +IPGM KI+ Q+++ E LK E+MI +MTP+ER PEL
Sbjct: 331 DFLKQTRLLKNMGSLGGIMKLIPGMNKISADQLQKGEDQLKRAESMINSMTPDERRNPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
L+ SP RR+R+A+ SG + + VS+LV+ +MR M+ +
Sbjct: 391 LSSSPSRRRRIAKGSGHSLEDVSKLVSDFQKMRSLMQQM 429
>gi|81300580|ref|YP_400788.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus elongatus PCC 7942]
gi|2126515|pir||S68160 probable RNA binding protein ffh - Synechococcus sp. (strain PCC
7942)
gi|81169461|gb|ABB57801.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus elongatus PCC 7942]
Length = 496
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/380 (59%), Positives = 298/380 (78%), Gaps = 1/380 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V E+AVG +I G+RPDQQ +K+V DELV++MG
Sbjct: 42 LKEVRRALLEADVNLGVVKEFIAQVQEKAVGTQVISGIRPDQQFIKVVYDELVQVMGETH 101
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA +L+K+G+S +LVA DVYRPAAIDQL+ L
Sbjct: 102 VPLAQAAKAPTVILMAGLQGAGKTTATAKLALHLRKEGRSTLLVATDVYRPAAIDQLITL 161
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+E+A+++ +D VIVDTAGRLQID MM+EL VK
Sbjct: 162 GKQIDVPVFELGSDANPVEIARQGVEKARQEGIDTVIVDTAGRLQIDTEMMEELAQVKEA 221
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA+L +F+ IGITGAILTKLDGDSRGGAALS++ VSG+PIK
Sbjct: 222 IAPHEVLLVVDSMIGQEAASLTRSFHERIGITGAILTKLDGDSRGGAALSIRRVSGQPIK 281
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PF+P+RMA RILGMGDVL+ VEKAQE + D E+MQ+KI++A FDF
Sbjct: 282 FVGLGEKVEALQPFHPERMASRILGMGDVLTLVEKAQEEIDLADVEKMQEKILAAKFDFT 341
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFLKQ R + MGS++ I +IPG+ GKI Q+R+ E+ LK +EAMI +MTP+ER P+
Sbjct: 342 DFLKQMRLLKNMGSLAGFIKLIPGLGGKINDEQLRQGERQLKRVEAMINSMTPQERRDPD 401
Query: 360 LLAESPVRRKRVAQDSGKTE 379
LL+ SP RR R+A+ G+TE
Sbjct: 402 LLSNSPSRRHRIAKGCGQTE 421
>gi|291567513|dbj|BAI89785.1| signal recognition particle protein [Arthrospira platensis NIES-39]
Length = 470
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/399 (57%), Positives = 298/399 (74%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F++ V QA G ++ GV+P QQ +KIV DELVK+MG
Sbjct: 31 LKEVRRALLEADVNLMVVKDFIKEVGVQAQGSQVVSGVKPGQQFIKIVHDELVKVMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A+ PT++L+AGLQG GKTT SAKLA +L+K+ +S +LVA DVYRPAAIDQL+ L
Sbjct: 91 VPLAEAQQPPTIVLMAGLQGTGKTTASAKLALHLQKENRSSLLVATDVYRPAAIDQLMTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G + P +IA+QG+E K + +D +I+DTAGRLQID+ MM EL +K
Sbjct: 151 GKQINVPVFELGKDADPVEIARQGIEYGKAQGIDTIIIDTAGRLQIDQNMMAELAQIKET 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TFN IGITGAILTK+DGDSRGGAALS++ VSG PIK
Sbjct: 211 VQPHETLLVVDAMTGQEAATLTQTFNDRIGITGAILTKMDGDSRGGAALSIRRVSGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYP+RMA RILGMGD+L+ VEKA+E DAE+MQ+KI+ A FDF
Sbjct: 271 FVGVGEKVEALQPFYPERMASRILGMGDILTLVEKAEEEFDIADAEKMQEKILEAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQTR + MGS+ ++ +IPGM KI+ Q+ E LK EAMI +MT EER+ PEL
Sbjct: 331 DFLKQTRLMKNMGSLGGLVKLIPGMNKISQEQLDAGESQLKRSEAMINSMTIEERKNPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
L+ SP RRKRVA+ +G E+ V +LV+ +MR M+ +
Sbjct: 391 LSNSPSRRKRVAKGAGYAEKDVMRLVSDFQRMRSLMQQM 429
>gi|159903874|ref|YP_001551218.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9211]
gi|159889050|gb|ABX09264.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9211]
Length = 485
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/399 (56%), Positives = 302/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++ +RRALLEADVSL VV+ FV V ++A+G ++RGV+P Q+ V++V+ ELV++MGGE
Sbjct: 31 LKQVRRALLEADVSLSVVKEFVAEVGQKAIGAEVVRGVKPGQKFVEVVKQELVEVMGGEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L +PTVIL+AGLQG GKTT +AKLA +LK QG+ ++VA DVYRPAAI+QL L
Sbjct: 91 APLANVSEKPTVILMAGLQGAGKTTATAKLALHLKDQGRKALMVAADVYRPAAIEQLTTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ + V++ G+ +KP QIA GLE+A+ + D ++VDTAGRLQID MMDE+ ++
Sbjct: 151 GSQIDIDVFSLGSNLKPEQIAASGLEKARNEGFDTLLVDTAGRLQIDSEMMDEMVRIRSA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+K++SGKPIK
Sbjct: 211 VNPDEVLLVVDSMIGQEAAELTRAFHEKVGITGAVLTKLDGDSRGGAALSIKKISGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E LEPF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE+MQKK A+FDF+
Sbjct: 271 FIGTGEKVEALEPFHPERMASRILGMGDVLTLVEKAQKEVEIADAEQMQKKFQEASFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF+KQ R + RMGS+ ++ MIPGM KI ++ E+ LK +EAMI +MTP ER +PEL
Sbjct: 331 DFVKQMRLIKRMGSLGGLMKMIPGMNKIDDGMIKSGEEQLKRIEAMIGSMTPAERTQPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+RVA SG T + +++A +MR MK +
Sbjct: 391 LAAQPSRRRRVALGSGHTPADMDKVLADFQKMRGFMKQM 429
>gi|56752330|ref|YP_173031.1| signal recognition particle receptor [Synechococcus elongatus PCC
6301]
gi|56687289|dbj|BAD80511.1| signal recognition particle receptor [Synechococcus elongatus PCC
6301]
Length = 496
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/380 (59%), Positives = 296/380 (77%), Gaps = 1/380 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V E+AVG +I G+RPDQQ +K+V DELV++MG
Sbjct: 42 LKEVRRALLEADVNLGVVKEFIAQVQEKAVGTQVISGIRPDQQFIKVVYDELVQVMGETH 101
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PTVIL+AGLQG GKTT +AKLA +L+K+G+S +LVA DVYRPAAIDQL+ L
Sbjct: 102 VPLAQAAKAPTVILMAGLQGAGKTTATAKLALHLRKEGRSTLLVATDVYRPAAIDQLITL 161
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+E+A+++ +D VIVDTAGRLQID MM+EL VK
Sbjct: 162 GKQIDVPVFELGSDANPVEIARQGVEKARQEGIDTVIVDTAGRLQIDTEMMEELAQVKEA 221
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEA +L +F+ IGITGAILTKLDGDSRGGAALS++ VSG PIK
Sbjct: 222 IAPHEVLLVVDSMIGQEAPSLTRSFHERIGITGAILTKLDGDSRGGAALSIRRVSGHPIK 281
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PF+P+RMA RILGMGDVL+ VEKAQE + D E+MQ+KI++A FDF
Sbjct: 282 FVGLGEKVEALQPFHPERMASRILGMGDVLTLVEKAQEEIDLADVEKMQEKILAAKFDFT 341
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFLKQ R + MGS++ I +IPG+ GKI Q+R+ E+ LK +EAMI +MTP+ER P+
Sbjct: 342 DFLKQMRLLKNMGSLAGFIKLIPGLGGKINDEQLRQGERQLKRVEAMINSMTPQERRDPD 401
Query: 360 LLAESPVRRKRVAQDSGKTE 379
LL+ SP RR R+A+ G+TE
Sbjct: 402 LLSNSPSRRHRIAKGCGQTE 421
>gi|434407141|ref|YP_007150026.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cylindrospermum stagnale PCC 7417]
gi|428261396|gb|AFZ27346.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cylindrospermum stagnale PCC 7417]
Length = 484
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/399 (58%), Positives = 304/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V +A G +I GVRPDQQ +KIV DELV++MG E
Sbjct: 31 LREVRRALLEADVNLQVVKDFITQVEAKAQGAEVISGVRPDQQFIKIVYDELVQVMGEEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L + + TV+L+AGLQG GKTT SAKLA +L+K +SC+LVA DVYRPAAIDQL+ L
Sbjct: 91 VPLAETEGQTTVVLMAGLQGTGKTTASAKLALHLRKLNRSCLLVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+E A+ + V+ VI+DTAGRLQID+ MM EL +K
Sbjct: 151 GKQIDVPVFELGSDADPVEIARQGVERARAEGVNTVIIDTAGRLQIDEDMMAELARIKAT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVD+MTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV+++SG PIK
Sbjct: 211 VQPDETLLVVDSMTGQEAANLTRTFHDQIGITGAILTKLDGDSRGGAALSVRQISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+KI+SA FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEQMQEKILSAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ MIPGMGK++ Q+++ E LK EAMI +MT +ER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGIMKMIPGMGKLSDDQLKQGETQLKRCEAMINSMTKQERRDPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
L+ SP RR+R+A +G E VS+LVA +MR M+ +
Sbjct: 391 LSSSPSRRRRIANGAGYRESDVSKLVADFQKMRSLMQQM 429
>gi|434384585|ref|YP_007095196.1| signal recognition particle protein [Chamaesiphon minutus PCC 6605]
gi|428015575|gb|AFY91669.1| signal recognition particle protein [Chamaesiphon minutus PCC 6605]
Length = 466
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/389 (57%), Positives = 295/389 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL ADV++ VV FV+ V +A G ++ GVRPDQQ +KIV DELVK MG
Sbjct: 31 LKEVRRALLSADVNVQVVTNFVKEVETKAQGANVVSGVRPDQQFIKIVYDELVKTMGETN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L A ++PTVIL+AGLQG GKTT +AKLA +L+K+ ++ ++VA DVYRPAAIDQL+ L
Sbjct: 91 SPLANASTKPTVILMAGLQGAGKTTATAKLALHLRKENRTALMVATDVYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ P +IA+QG+ +A++ VD VIVDTAGRLQID MM EL DVK
Sbjct: 151 GKQIDVPVFDMGTDANPVEIARQGIAKARELGVDTVIVDTAGRLQIDDRMMTELADVKAA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+ GQEAA + TF+ IGITGAILTKLDGD+RGGAALSV+ +SG+PIK
Sbjct: 211 IQPDEILLVVDSAIGQEAANVTMTFHDRIGITGAILTKLDGDTRGGAALSVRAISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE DA ++ +KI+ A FDFN
Sbjct: 271 FVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEDFDIADAAKLTEKIIEARFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF+KQ R + MGS+ ++ MIPGMGK++ Q+++ E LK EAMI++MT EER P+L
Sbjct: 331 DFIKQMRLLKNMGSLGGLLKMIPGMGKLSDGQLKQGEDQLKKAEAMIQSMTKEERGNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
LA +P RR+R+A+ G E VS+L+++
Sbjct: 391 LASTPSRRRRIAKGCGYNESDVSKLISEF 419
>gi|300867755|ref|ZP_07112400.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
sp. PCC 6506]
gi|300334338|emb|CBN57572.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oscillatoria
sp. PCC 6506]
Length = 483
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/399 (58%), Positives = 303/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V+ +A G +I GVRPDQQ +KIV DELV++MG
Sbjct: 31 LREVRRALLEADVNLQVVKDFIAEVAVKAQGAEVISGVRPDQQFIKIVYDELVRVMGETN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L A S PT++L+AGLQG GKTT SAKLA L+KQ +S +LVA D+YRPAAIDQL+ L
Sbjct: 91 SPLAIADSAPTIVLMAGLQGTGKTTASAKLALQLRKQNRSTLLVATDIYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G + P +IA+QG++ A++ VD VIVDTAGRLQID+ MM EL +K
Sbjct: 151 GKQIDVPVFELGKDTDPVEIARQGIDRARELGVDTVIVDTAGRLQIDQDMMAELARIKET 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++SG PIK
Sbjct: 211 IQPHETLLVVDAMTGQEAANLTRTFHDQIGITGAILTKMDGDSRGGAALSVRQISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+KI++A FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDITDAEQMQEKILTAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ MIPG+ K++ +R+ E L+ EAMI +MT EER PEL
Sbjct: 331 DFLKQMRLLKNMGSLGGILKMIPGLNKMSDDDMRKGEVQLRRTEAMINSMTTEERRNPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
L+ SP RR+R+A+ SG E V++LV+ +MR M+ L
Sbjct: 391 LSSSPSRRRRIAKGSGFVEADVAKLVSDFQKMRNMMQQL 429
>gi|428312529|ref|YP_007123506.1| signal recognition particle subunit FFH/SRP54 (srp54) [Microcoleus
sp. PCC 7113]
gi|428254141|gb|AFZ20100.1| signal recognition particle subunit FFH/SRP54 (srp54) [Microcoleus
sp. PCC 7113]
Length = 481
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/399 (57%), Positives = 306/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL ADV+L VV+ FV V +A G ++ GVRPDQQ +KIV DELV++MG
Sbjct: 31 LKEVRRALLSADVNLQVVKDFVADVETKAQGAEVLSGVRPDQQFIKIVYDELVQVMGETN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L + PT++L+AGLQG GKTT +AKLA +L+KQ ++C+LVA DVYRPAAIDQLV L
Sbjct: 91 IPLAQVDTAPTIVLMAGLQGTGKTTATAKLALHLQKQNRTCLLVATDVYRPAAIDQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G + P +IA+QG+ AK+ VD VI+DTAGRLQID+ MM EL +K+
Sbjct: 151 GQQINVPVFELGADADPVEIARQGVARAKETGVDTVIIDTAGRLQIDQDMMGELARIKQT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVD+MTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+ VSG+PIK
Sbjct: 211 VQPHETLLVVDSMTGQEAANLTRTFHDQIGITGAILTKLDGDTRGGAALSVRRVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+K+++A FDF+
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEKMQEKMLTAKFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ MIPGMGK++ Q+++ E LK EA+I +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGLMKMIPGMGKLSADQLQQGETKLKQSEALINSMTAEERRNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA SP RR+R+A+ +G TE+ V+ LV++ +MR M+ +
Sbjct: 391 LASSPSRRRRIARGAGYTERDVTNLVSEFTKMRNLMQQM 429
>gi|428305921|ref|YP_007142746.1| signal recognition particle subunit FFH/SRP54 (srp54) [Crinalium
epipsammum PCC 9333]
gi|428247456|gb|AFZ13236.1| signal recognition particle subunit FFH/SRP54 (srp54) [Crinalium
epipsammum PCC 9333]
Length = 482
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/411 (58%), Positives = 310/411 (75%), Gaps = 4/411 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALL ADV+L VV+ FV V +A+G +I GVRPDQQ +KIV D+LV++MG
Sbjct: 31 LREVRRALLGADVNLQVVKDFVAEVETKALGADVIAGVRPDQQFIKIVYDQLVEVMGETN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A++ PTV+L+AGLQG GKTT +AKLA +L+K + +LVA DVYRPAAIDQLV L
Sbjct: 91 VPLAKAETSPTVVLMAGLQGTGKTTATAKLALHLQKLERRALLVATDVYRPAAIDQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ P +IA+QG+E+AK+ VD VI+DTAGRLQID+ MM EL +K +
Sbjct: 151 GQQINVPVFAMGTDADPVEIARQGVEKAKEMGVDTVIIDTAGRLQIDENMMGELARIKEI 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+ +SG+PIK
Sbjct: 211 VQPHETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKLDGDTRGGAALSVRRISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DA +MQ+K+MSA FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLVDAAKMQEKMMSAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ MIPGMGK++ Q+ + E LK E+MI +MT EER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGMLKMIPGMGKLSNEQLSQGETQLKRAESMINSMTKEERGNPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
L+ SP RR+RVA+ G E VS+LV+ +MR +LM M G++P++
Sbjct: 391 LSSSPSRRRRVARGCGYGESDVSKLVSDFTKMR----SLMQQMSQGAMPSM 437
>gi|414078759|ref|YP_006998077.1| signal recognition particle protein SRP [Anabaena sp. 90]
gi|280987222|gb|ADA00385.1| signal recognition particle protein SRP [Anabaena sp. 90]
gi|413972175|gb|AFW96264.1| signal recognition particle protein SRP [Anabaena sp. 90]
Length = 482
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/397 (58%), Positives = 301/397 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V +A G +I GVRPDQQ +KIV DELV++MG E
Sbjct: 31 LREVRRALLEADVNLQVVKDFISEVETKAQGAEVIAGVRPDQQFIKIVYDELVQVMGEEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L + TV+L+AGLQG GKTT +AKLA +L+KQ +SC+LVA D+YRPAAIDQL+ L
Sbjct: 91 VPLAEVAGKTTVVLMAGLQGTGKTTATAKLALHLRKQDRSCLLVATDIYRPAAIDQLITL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G P +IA+QG+E A+ + ++ VI+DTAGRLQID+ MM EL +K V
Sbjct: 151 GKQIDVPVFELGIAADPVEIARQGVERARAEGINTVIIDTAGRLQIDEDMMAELARIKEV 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ +IGITGAILTK+DGDSRGGAALSV+++SG PIK
Sbjct: 211 VQPDETLLVVDAMTGQEAANLTRTFHNQIGITGAILTKMDGDSRGGAALSVRQISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE + DAE+MQ+KI+SA FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEIDLADAEQMQEKILSAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ MIPGM K++ Q+++ E LK EAMI +MT +ER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGIMKMIPGMNKLSEDQLKQGETQLKRCEAMINSMTGKERRDPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
L+ SP RR+R+A SG E VS+LVA +MR M+
Sbjct: 391 LSSSPSRRRRIASGSGYREADVSKLVADFQKMRSLMQ 427
>gi|427725123|ref|YP_007072400.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7376]
gi|427356843|gb|AFY39566.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7376]
Length = 481
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/394 (56%), Positives = 299/394 (75%), Gaps = 1/394 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADV+L VV+ F+ V + A+G +I GV P QQ +KIV DEL+K+MG
Sbjct: 31 LKEVRRALLEADVNLQVVKGFIGDVEKAALGADVISGVNPGQQFIKIVNDELIKIMGESN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A+++PTVIL+AGLQG GKTT +AKL+ +L+KQ K+ ++VA DVYRPAAIDQL L
Sbjct: 91 APLAEAENKPTVILMAGLQGTGKTTATAKLSLFLRKQEKTTLMVATDVYRPAAIDQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ G++ P +IA+QG+E+ K+ VD VIVDTAGRLQID MM ELK +K
Sbjct: 151 GAQIDVPVFDLGSDANPVEIARQGIEKGKELGVDYVIVDTAGRLQIDADMMGELKQIKDT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P + LLVVDAMTGQEAA+L TF+ EIG+TGAILTK+DGD+RGGAALSV+ +SG+PIK
Sbjct: 211 IQPDDTLLVVDAMTGQEAASLTRTFHTEIGVTGAILTKMDGDTRGGAALSVRTISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYPDRMA RIL MGDVL+ VEKAQE + D EEMQ K++ A FDF+
Sbjct: 271 FIGVGEKVEALDPFYPDRMASRILNMGDVLTLVEKAQEAIDLSDVEEMQSKLLEARFDFD 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF+KQ R + MGS+ ++ +IPGMG K+ + + E LK +E MI +MT EER+ P+
Sbjct: 331 DFVKQMRLLKNMGSLGGLMKLIPGMGSKLDSGMLEQGEAQLKRVEIMINSMTKEERKNPD 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
LLA++P RR R+A+ SG +++ VS+L+ +MR
Sbjct: 391 LLAQTPKRRTRIAKGSGMSDKDVSKLITDFTRMR 424
>gi|412993787|emb|CCO14298.1| signal recognition particle protein [Bathycoccus prasinos]
Length = 571
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 251/459 (54%), Positives = 323/459 (70%), Gaps = 16/459 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALLEADVSLPVVRRF++ V E+A GV + +GV P Q+LVK+V DEL LMGG
Sbjct: 100 LKDVRRALLEADVSLPVVRRFIKKVEERAPGVKVTKGVEPSQELVKLVADELCTLMGGVG 159
Query: 61 SELVFAKSR---PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQL 117
++ + + PTVIL+AGLQGVGKTT KLA LKKQ K+C+LVA DVYRPAAIDQL
Sbjct: 160 ADGINFREEGNGPTVILMAGLQGVGKTTACGKLALSLKKQNKTCLLVATDVYRPAAIDQL 219
Query: 118 VILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKK-NVDVVIVDTAGRLQIDKAMMDELKD 176
LG + VPVY G P IA G+ EAKK+ ++DVVIVDTAGRL ID+A+M+EL
Sbjct: 220 KKLGSDLNVPVYDEGANASPPSIAANGVAEAKKRGDIDVVIVDTAGRLNIDEALMNELIA 279
Query: 177 VKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSG 236
K E LLVVDAMTGQEAA L +F I ITGAILTKLDGD+RGGAALSV+EVSG
Sbjct: 280 TKMSTQADETLLVVDAMTGQEAATLTKSFADAIDITGAILTKLDGDTRGGAALSVREVSG 339
Query: 237 KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN 296
KPIK G GE+M+ L+PFYP+RM RILGMGDV+SFVEKAQE ++Q DAE+M++KIM A
Sbjct: 340 KPIKFTGVGEKMDALDPFYPERMTSRILGMGDVVSFVEKAQEAVKQADAEQMKEKIMKAT 399
Query: 297 FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEERE 356
FDF+DFLK + MGSMS+++ MIPG K++ ++EAEKS KI +++I +MTPEER+
Sbjct: 400 FDFDDFLKNMDMMGDMGSMSQLMKMIPGANKLSDKDMQEAEKSFKIAKSLIMSMTPEERK 459
Query: 357 KPELLAESPV---RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSL--- 408
P++L S RR R+ + +GKTE+ +++L+ MRV+M+ + M E L
Sbjct: 460 YPDMLVASSTAESRRNRIVKGAGKTEEDLAELIVMFGGMRVKMQQMSAAMGSEAAKLGLQ 519
Query: 409 PALSNLE-DALKSE---QKAPPGTARRKRRSESRRQFVD 443
P LS+ E L SE ++ PG RR + + + V+
Sbjct: 520 PQLSSDEMTKLASEKVRKRIKPGHVRRNKAKKVPKSLVE 558
>gi|428206885|ref|YP_007091238.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Chroococcidiopsis thermalis PCC 7203]
gi|428008806|gb|AFY87369.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Chroococcidiopsis thermalis PCC 7203]
Length = 487
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/463 (53%), Positives = 322/463 (69%), Gaps = 28/463 (6%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V +A G ++ GVRPDQQ +K+V DELV++MG
Sbjct: 31 LREVRRALLEADVNLQVVKDFIADVETKAQGAEVLSGVRPDQQFIKVVYDELVEVMGETN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A + PT++L+AGLQG GKTT +AKLA +L+KQ SC++VA DVYRPAAIDQLV L
Sbjct: 91 VPLAQADAAPTIVLMAGLQGTGKTTATAKLALHLRKQDLSCLMVATDVYRPAAIDQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G+ P +IA++G+E+AK + VD VI+DTAGRLQID+ MM EL VK
Sbjct: 151 GKQIDVPVFEMGSNADPVEIAREGVEQAKAQGVDTVIIDTAGRLQIDQDMMAELIRVKEA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEAA L TF+ ++GITGAILTKLDGDSRGGAALSV+ +SG+PIK
Sbjct: 211 VQPHETLLVVDAMTGQEAANLTRTFHEQVGITGAILTKLDGDSRGGAALSVRRISGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGDVL+ VEKAQE DAE+MQ+KI+SA FDF
Sbjct: 271 FVGVGEKVEALQPFYPDRMASRILGMGDVLTLVEKAQEEFDLADAEKMQEKILSAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ +IPGM K++ Q+++ E LK EAMI +MT +ER+ P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGIMKLIPGMNKMSDDQLKQGETQLKRCEAMINSMTKQERKDPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALKS 420
L+ SP RR+R+A+ SG E VS+LV+ +MR M+ + P + NL
Sbjct: 391 LSSSPSRRRRIARGSGYKESDVSKLVSDFQRMRAMMQQMGQGG---GFPGMPNL------ 441
Query: 421 EQKAPPGTARRKRRSESRRQFVDP--ASTRPSP---RGFGGGS 458
DP A +RP+P RG+ GG+
Sbjct: 442 --------------FGGGGGMGDPYAAGSRPTPPGWRGYAGGA 470
>gi|87125498|ref|ZP_01081343.1| Signal recognition particle protein [Synechococcus sp. RS9917]
gi|86166798|gb|EAQ68060.1| Signal recognition particle protein [Synechococcus sp. RS9917]
Length = 492
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/399 (54%), Positives = 304/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADVSLPVV+ FV V ++AVG ++RG+ PDQ+ +++V D+LV++MGG
Sbjct: 31 LKEVRRALLEADVSLPVVKDFVAEVRQKAVGADVVRGISPDQKFIQVVHDQLVEVMGGGN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A+ PTV+L+AGLQG GKTT +AKL YLK QG+ ++V DVYRPAAIDQL L
Sbjct: 91 APLARAEQAPTVVLMAGLQGAGKTTATAKLGLYLKDQGRRALMVGADVYRPAAIDQLRTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+GV V++ G E KP IA GL +A+++ D ++VDTAGRLQID++MMDE+ ++
Sbjct: 151 GEQIGVEVFSLGAEAKPEDIASAGLAKARQEGFDTLLVDTAGRLQIDQSMMDEMVRIRSA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VSG+PIK
Sbjct: 211 VQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAALSIRKVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A+FDF+
Sbjct: 271 FIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEASFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q R + RMGS+ ++ MIPGM K+ +++ E+ LK +EAMI +MT ER++PEL
Sbjct: 331 DFLQQMRLIKRMGSLGGLMKMIPGMNKLDDGMLKQGEQQLKKIEAMIGSMTVAERQQPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+R+A SG + V +++A +MR M+ +
Sbjct: 391 LAAQPSRRRRIASGSGHSPADVDKVLADFQKMRGFMQQM 429
>gi|86607761|ref|YP_476523.1| signal recognition particle protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556303|gb|ABD01260.1| signal recognition particle protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 487
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/393 (56%), Positives = 300/393 (76%), Gaps = 1/393 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALL+ADV+L VV++F++ V E A+G +I GV PDQQ +KIV DELVK+MG
Sbjct: 31 LREVRRALLDADVNLQVVKQFIEDVREAALGSEVILGVTPDQQFIKIVHDELVKVMGEAN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ A+ PT++L+AGLQG GKTT AKLA YL+KQGK ++VAGD+YRPAAIDQL L
Sbjct: 91 VPIAQAEQPPTIVLMAGLQGSGKTTTCAKLALYLRKQGKKSLMVAGDIYRPAAIDQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV+ G + P +IA+QG+E A+++ D VI+DTAGRLQID MM EL+ +K
Sbjct: 151 GQQIQIPVFDLG-KADPVEIARQGVETARQQGYDYVILDTAGRLQIDLEMMAELERIKAA 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQEAA+L F+ +GITGAILTKLDGD+RGGAALS+++VSG+PIK
Sbjct: 210 VQPHEILLVVDAMIGQEAASLTRAFHERLGITGAILTKLDGDTRGGAALSIRQVSGQPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYPDRMA RILGMGD+LS VEKAQE + DA M +K+M+A FDF
Sbjct: 270 FIGVGEKVEALDPFYPDRMASRILGMGDILSLVEKAQEEIDLGDAASMAEKMMTAQFDFT 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + RMGS++ ++ ++PGMGKI+ Q+++ + L EAMI +MTPEER P+L
Sbjct: 330 DFLKQMRLIKRMGSLAGLLRLMPGMGKISEEQLQKGQDQLARAEAMINSMTPEERRNPDL 389
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
LA S R++RVA+ SG + VS+LV+ +MR
Sbjct: 390 LARSVSRKRRVARGSGHKLEDVSRLVSDFQRMR 422
>gi|440681861|ref|YP_007156656.1| signal recognition particle subunit FFH/SRP54 (srp54) [Anabaena
cylindrica PCC 7122]
gi|428678980|gb|AFZ57746.1| signal recognition particle subunit FFH/SRP54 (srp54) [Anabaena
cylindrica PCC 7122]
Length = 482
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/399 (58%), Positives = 302/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+L VV+ F+ V +A G +I GVRPDQQ +KIV DELV++MG E
Sbjct: 31 LREVRRALLEADVNLQVVKDFIAEVETKAQGSEVISGVRPDQQFIKIVYDELVQVMGEEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L + + TV+L+AGLQG GKTT +AKLA +L+K +SC+LVA DVYRPAAIDQL+ L
Sbjct: 91 VPLAEVEGKTTVVLMAGLQGTGKTTATAKLALHLRKLNRSCLLVATDVYRPAAIDQLLTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G++ P +IA+QG+E A+ + ++ VIVDTAGRLQID+ MM EL +K
Sbjct: 151 GKQIDVPVFELGSDADPVEIARQGVERARAEGINTVIVDTAGRLQIDQEMMAELARIKST 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVD+MTGQEAA L TF+ +IGITGAILTKLDGDSRGGAALSV+++SG PIK
Sbjct: 211 IEPDETLLVVDSMTGQEAANLTRTFHDQIGITGAILTKLDGDSRGGAALSVRQISGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DAE+MQ KI+SA FDF
Sbjct: 271 FVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDLADAEQMQAKILSAKFDFT 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + MGS+ ++ MIPGM K++ Q+++ E LK EAMI +MT +ER P+L
Sbjct: 331 DFLKQMRLLKNMGSLGGIMKMIPGMNKLSDDQLKQGETQLKRCEAMINSMTRQERLDPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
L+ SP RR+R+A +G E VS+LVA +MR M+ +
Sbjct: 391 LSSSPSRRRRIASGAGYREADVSKLVADFQKMRSLMQQM 429
>gi|303273580|ref|XP_003056150.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226462234|gb|EEH59526.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 559
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/452 (52%), Positives = 324/452 (71%), Gaps = 15/452 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++DIRRALLEADVSLPVVRRF+++V E+++GV + +GV QQL K+V DEL +LMGG
Sbjct: 106 LKDIRRALLEADVSLPVVRRFIKSVEEKSIGVKVTKGVSASQQLTKVVADELCELMGGFG 165
Query: 61 SE-LVFAKSR--PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQL 117
+ L+F K PTVIL+AGLQGVGKTT KLA +LK QGK +LVA DVYRPAAIDQL
Sbjct: 166 GDKLIFRKEGEGPTVILMAGLQGVGKTTACGKLALFLKAQGKQSLLVATDVYRPAAIDQL 225
Query: 118 VILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDV 177
LGEQ+ VPV+ GT+ P IA+ G+E+AK +N DVVIVDTAGRLQ+D+ +M EL
Sbjct: 226 KKLGEQIDVPVFELGTDFSPPDIARSGVEKAKLENFDVVIVDTAGRLQVDEMLMAELLAT 285
Query: 178 KRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGK 237
K E LLVVDAMTGQEAA+L FN +GITGA+LTK+DGD+RGGAALSV+EVSGK
Sbjct: 286 KAATRADETLLVVDAMTGQEAASLTAAFNDAVGITGAVLTKMDGDTRGGAALSVREVSGK 345
Query: 238 PIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANF 297
PIK +G GE+++ LEPF+P+RM RILGMGDV+S VE+AQ +++E A M+ KI+SA F
Sbjct: 346 PIKFIGSGEKLDALEPFFPERMTTRILGMGDVVSLVERAQVAVKEEQANLMRDKILSATF 405
Query: 298 DFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREK 357
DFNDFL Q + +MG M + M+PGM ++ ++++AEKSL + +++I +MTP ER+
Sbjct: 406 DFNDFLSQLEMMGKMGGMGGLTKMMPGMNTMSDKELQDAEKSLSVAKSLIMSMTPRERQF 465
Query: 358 PELL---AESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG-----GSLP 409
P+LL + + RR RV + SG++++ ++ L+ MRV+M++L M G G +P
Sbjct: 466 PDLLVAGSSAASRRGRVVEGSGRSDKDLANLIVMFGSMRVKMQSLSAQMNGTAKEVGLVP 525
Query: 410 ALSNLE-DALKSE---QKAPPGTARRKRRSES 437
LS ++ + L E ++ PG RR++ + S
Sbjct: 526 QLSEVDLNKLAFEGVGKRVSPGMVRRRKLNAS 557
>gi|148242807|ref|YP_001227964.1| Signal recognition particle protein [Synechococcus sp. RCC307]
gi|147851117|emb|CAK28611.1| Signal recognition particle protein [Synechococcus sp. RCC307]
Length = 493
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/399 (54%), Positives = 303/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADVSLPVV+ F+ V E+A+G ++RGV PDQQ +K+V +ELV++MGG
Sbjct: 35 LKDVRRALLDADVSLPVVKSFIAEVREKALGADVVRGVSPDQQFIKLVHEELVEVMGGAN 94
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A+ PTV+L+AGLQG GKTT +AKL +LK+QG+ +LVA D YRPAAIDQL L
Sbjct: 95 APLAKAEQSPTVVLMAGLQGAGKTTATAKLGLHLKEQGRRALLVAADTYRPAAIDQLQTL 154
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ V V++ G + KP IA+ GL + +++ D VIVDTAGRLQID +MM+E+ ++
Sbjct: 155 GQQIDVEVFSLGADAKPEAIAEAGLAKGREEGFDTVIVDTAGRLQIDTSMMEEMVRIRSA 214
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA L +F+ ++GITGA+LTK+DGDSRGGAALS+++VSG PIK
Sbjct: 215 VAPDEVLLVVDSMIGQEAADLTRSFHEQVGITGAVLTKMDGDSRGGAALSIRKVSGAPIK 274
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQ+K+ A+FDF+
Sbjct: 275 FIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVEIADVEKMQRKLQEASFDFS 334
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF+KQ R + RMGS+ ++ MIPGM KI +++ E LK +EAMI +MT +ERE P+L
Sbjct: 335 DFVKQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEAQLKRIEAMIGSMTVQERENPDL 394
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+R+A+ SG +V +++A +MR M+ +
Sbjct: 395 LASQPSRRRRIAKGSGHQPAEVDKMLADFQKMRGFMQQM 433
>gi|33866152|ref|NP_897711.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
8102]
gi|33639127|emb|CAE08133.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
8102]
Length = 487
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/399 (54%), Positives = 302/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALLEADVSLPVV+ FV V E+AVG ++RGV PDQ+ +++V ++LV++MGG+
Sbjct: 31 LKDVRRALLEADVSLPVVKDFVADVREKAVGAEVVRGVSPDQKFIQVVHEQLVEVMGGDN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+QL L
Sbjct: 91 APLAKAAEAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRRALMVGADVYRPAAIEQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+GV V++ GTE KP +IA GL +AK++ D ++VDTAGRLQID MM+E+ ++
Sbjct: 151 GGQIGVEVFSLGTEAKPEEIAAAGLAKAKEEGFDTLLVDTAGRLQIDTEMMEEMVRIRTA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VSG+PIK
Sbjct: 211 VQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAALSIRKVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A FDF+
Sbjct: 271 FIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEATFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF++Q R + RMGS+ ++ MIPGM K+ +++ E+ LK +EAMI +MTP+ERE P+L
Sbjct: 331 DFVQQMRLIKRMGSLGGLMKMIPGMNKLDDGILKQGEQQLKRIEAMIGSMTPKERENPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+R+A SG V +++A +MR M+ +
Sbjct: 391 LAGQPSRRRRIAAGSGHQPADVDKVLADFQKMRGFMQQM 429
>gi|255070283|ref|XP_002507223.1| type II secretory pathway family [Micromonas sp. RCC299]
gi|226522498|gb|ACO68481.1| type II secretory pathway family [Micromonas sp. RCC299]
Length = 568
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/448 (53%), Positives = 324/448 (72%), Gaps = 15/448 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++DIRRALLEADVSLPVVRRF++ + ++A+G + +GV QQL K+V DEL +LMGG
Sbjct: 114 LKDIRRALLEADVSLPVVRRFIKNIEQKAIGTRVTKGVNAGQQLTKVVADELCELMGGFG 173
Query: 61 SE-LVFAKSR--PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQL 117
+ L F PTVIL+AGLQGVGKTT KLA YLKKQGK +LVA DVYRPAAI+QL
Sbjct: 174 GDSLAFKDPSMGPTVILMAGLQGVGKTTACGKLALYLKKQGKDSLLVATDVYRPAAIEQL 233
Query: 118 VILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDV 177
LGEQV PV+ G V P ++A+ GLE+A+ + +DVVI+DTAGRLQ+D +M+EL+
Sbjct: 234 KRLGEQVKTPVFDMGVRVDPPEVARLGLEKARAEGIDVVIIDTAGRLQVDVHLMEELRAT 293
Query: 178 KRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGK 237
K E+LLVVDAMTGQEAAAL F+ +GITGA+LTK+DGD+RGGAALSV+EVSGK
Sbjct: 294 KIATAADEILLVVDAMTGQEAAALTAAFDEAVGITGAVLTKMDGDTRGGAALSVREVSGK 353
Query: 238 PIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANF 297
PIK G GE+ME LEPFYP+RMA RILGMGDV++ VE+AQ+V++ E+AE+M+ KI+SA F
Sbjct: 354 PIKFTGVGEKMEALEPFYPERMASRILGMGDVVTLVERAQQVVKNEEAEQMRDKILSATF 413
Query: 298 DFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREK 357
DFNDF+KQ + +MG M + ++PGM ++ +++EA+KSLK+ +++I +MT +ER+
Sbjct: 414 DFNDFIKQMEMMGQMGGMDGFMKLLPGMSGMSEREMQEADKSLKVAKSLILSMTSKERQF 473
Query: 358 PELL---AESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS-----LP 409
P++L A + RRKR+ + +G++E+ +SQL+ MRV+M+ + + G S P
Sbjct: 474 PDILVAGASAKSRRKRIIEGAGRSEKDLSQLIVLFGSMRVKMQKMTAEITGASAEVGLTP 533
Query: 410 ALSNLE-DALKSE---QKAPPGTARRKR 433
LS + + L +E + PG RR R
Sbjct: 534 QLSEEDMNTLANEGLRKNVSPGMVRRLR 561
>gi|124023656|ref|YP_001017963.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9303]
gi|123963942|gb|ABM78698.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9303]
Length = 494
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/399 (54%), Positives = 304/399 (76%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++ +RRALL ADVSL VVR FV V ++AVG ++RGV PDQ+ V++V +LV++MGG+
Sbjct: 31 LKQVRRALLGADVSLEVVREFVDEVRQKAVGAEVVRGVTPDQKFVQVVHQQLVEVMGGDN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ + AK PTV+L+AGLQG GKTT +AKL +LK QG+ ++VA DVYRPAAIDQL L
Sbjct: 91 APMAEAKDSPTVVLMAGLQGAGKTTATAKLGLHLKDQGQRPLMVAADVYRPAAIDQLRTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+GV V++ G +VKP +IA GL +A+++ D ++VDTAGRLQID MM+E+ ++
Sbjct: 151 GEQIGVDVFSLGDDVKPEEIAAAGLAKAREEGFDTLLVDTAGRLQIDTEMMEEMVRIRSA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA L F+ ++GITG++LTKLDGDSRGGAALS+++VSG+PIK
Sbjct: 211 VEPDEVLLVVDSMIGQEAAELTRAFHDKVGITGSVLTKLDGDSRGGAALSIRKVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A+FDF+
Sbjct: 271 FIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEASFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+QTR + RMGS+ +I M+PGM K+ +++ E+ LK +EAMI +MT +ER++PEL
Sbjct: 331 DFLQQTRLIKRMGSLGGLIKMMPGMNKLDDGMLKQGEQQLKRIEAMIGSMTADERKQPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+R+A SG + V +++A +MR M+ +
Sbjct: 391 LASQPSRRRRIAGGSGHSPADVDKVLADFQKMRGFMQQM 429
>gi|260435394|ref|ZP_05789364.1| signal recognition particle protein [Synechococcus sp. WH 8109]
gi|260413268|gb|EEX06564.1| signal recognition particle protein [Synechococcus sp. WH 8109]
Length = 486
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/399 (54%), Positives = 298/399 (74%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALLEADVSLPVV+ FV V ++AVG ++RGV PDQ+ +++V ++LV++MGG+
Sbjct: 31 LKDVRRALLEADVSLPVVKEFVAEVRDKAVGAEVVRGVSPDQKFIQVVHEQLVEVMGGDN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+QL L
Sbjct: 91 APLAKAAEAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRRALMVGADVYRPAAIEQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ V V++ G E KP IA GL +AK++ D ++VDTAGRLQID MM+E+ ++
Sbjct: 151 GAQIDVEVFSLGAEAKPEDIAAAGLAKAKEEGFDTLLVDTAGRLQIDTEMMEEMVRIRTA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VSG+PIK
Sbjct: 211 VQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAALSIRKVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A FDF+
Sbjct: 271 FIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEATFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF+KQ R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +MT +ERE P+L
Sbjct: 331 DFVKQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKRIEAMIGSMTQQERENPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+R+A SG V +++A +MR M+ +
Sbjct: 391 LASQPSRRRRIASGSGHQAADVDKVLADFQKMRGFMQQM 429
>gi|78212426|ref|YP_381205.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. CC9605]
gi|78196885|gb|ABB34650.1| signal recognition particle protein [Synechococcus sp. CC9605]
Length = 492
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/399 (54%), Positives = 298/399 (74%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALLEADVSLPVV+ FV V ++AVG ++RGV PDQ+ +++V ++LV++MGG+
Sbjct: 31 LKDVRRALLEADVSLPVVKEFVADVRDKAVGAEVVRGVSPDQKFIQVVHEQLVEVMGGDN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+QL L
Sbjct: 91 APLAKAADAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRRALMVGADVYRPAAIEQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ V V++ G E KP IA GL +AK++ D ++VDTAGRLQID MM+E+ ++
Sbjct: 151 GAQIDVEVFSLGAEAKPEDIAAAGLAKAKEEGFDTLLVDTAGRLQIDTEMMEEMVRIRTA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VSG+PIK
Sbjct: 211 VQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAALSIRKVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A FDF+
Sbjct: 271 FIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEATFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF+KQ R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +MT +ERE P+L
Sbjct: 331 DFVKQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKRIEAMIGSMTQQERENPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+R+A SG V +++A +MR M+ +
Sbjct: 391 LASQPSRRRRIASGSGHQAADVDKVLADFQKMRGFMQQM 429
>gi|124026411|ref|YP_001015526.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. NATL1A]
gi|123961479|gb|ABM76262.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. NATL1A]
Length = 487
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/399 (55%), Positives = 296/399 (74%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++ +RRALL+ADVSL VV+ F+ V +AVG ++RG+ P Q+ +++V +ELV +MGGE
Sbjct: 31 LKQVRRALLDADVSLSVVKEFIDEVRVKAVGTEVVRGIDPGQKFIQVVHEELVNVMGGEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L ++ +PTVIL+AGLQG GKTT +AKL LK++ K +LVA D YRPAAIDQLV L
Sbjct: 91 DPLANSEEQPTVILMAGLQGAGKTTATAKLGLLLKEKNKKPLLVAADTYRPAAIDQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ V V+ + +KP +IAK+GLE+AKK+ D V+VDTAGRLQID MM E+ +K
Sbjct: 151 GKQIDVEVFNLSSNLKPEEIAKKGLEKAKKEGFDTVLVDTAGRLQIDTDMMGEMVRIKEA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA + +F+ ++GITGA+LTKLDGDSRGGAALS++++SGKPIK
Sbjct: 211 VQPDEVLLVVDSMIGQEAADITRSFHEKVGITGAVLTKLDGDSRGGAALSIRKISGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYP+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQKK+ A FDF+
Sbjct: 271 FIGTGEKVEALQPFYPERMASRILGMGDVLTLVEKAQKEVEIADAEIMQKKLQEATFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF+KQ R + RMGS+ ++ MIPGM KI ++ E LK +EAMI +M+ EER KPEL
Sbjct: 331 DFVKQMRMIKRMGSLGGLLKMIPGMNKIDDGMIKSGEDQLKKIEAMIGSMSVEERNKPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+RVA SG V +++A +MR MK +
Sbjct: 391 LAAQPSRRRRVASGSGHKPADVDKVLADFQRMRGLMKQM 429
>gi|145341290|ref|XP_001415746.1| IISP family transporter: signal recognition particle protein
(SRP54) [Ostreococcus lucimarinus CCE9901]
gi|144575969|gb|ABO94038.1| IISP family transporter: signal recognition particle protein
(SRP54) [Ostreococcus lucimarinus CCE9901]
Length = 498
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/447 (52%), Positives = 315/447 (70%), Gaps = 14/447 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALLEADVSLPVVRRF+ E+AVG+ + +GV P Q LVK V DEL +LMGG
Sbjct: 36 LKDVRRALLEADVSLPVVRRFIARCEEKAVGMKVTKGVEPGQMLVKCVADELCELMGGVG 95
Query: 61 SELVFAKS--RPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLV 118
+E + + PTV+L+AGLQGVGKTT KL+ L+KQGKS +LVA DVYRPAAIDQL
Sbjct: 96 AEGIKFRDDGEPTVVLMAGLQGVGKTTACGKLSLALRKQGKSVLLVATDVYRPAAIDQLK 155
Query: 119 ILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVK 178
LG+Q+GVPV+ G + P +IA +G+ +AK +++DVVIVDTAGRL ID+ +M ELK K
Sbjct: 156 TLGKQIGVPVFDMGVDGNPPEIAARGVRKAKDEDIDVVIVDTAGRLNIDEKLMGELKATK 215
Query: 179 RVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKP 238
+ E LLVVDAMTGQEAA L +FN + ITGAILTK+DGD+RGGAALSV+EVSGKP
Sbjct: 216 EATSADETLLVVDAMTGQEAATLTASFNEAVEITGAILTKMDGDTRGGAALSVREVSGKP 275
Query: 239 IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 298
IK G GE+M+ LEPFYP+RM RILGMGD++S VEK Q +++E+AE++++KIMSA FD
Sbjct: 276 IKFTGVGEKMDALEPFYPERMTSRILGMGDIVSLVEKVQAGVKEEEAEKIKQKIMSATFD 335
Query: 299 FNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
FNDF+ Q + MG M +++ M+PG K++ A + A KS+ I +++I +MT EER+ P
Sbjct: 336 FNDFVGQLEMMNNMGGMKQIMQMMPGTAKLSEADMEAAGKSMTIAKSLINSMTKEERQYP 395
Query: 359 ELLAESPV---RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG-----GSLPA 410
++L S RR+R+ + SG+TE ++QL+ MR +M+ + G + G G P
Sbjct: 396 DMLVASTTADSRRQRIVKGSGRTEADLAQLIMMFGGMRTQMQKMSGQLGGQAGDVGLQPQ 455
Query: 411 LSNLEDAL----KSEQKAPPGTARRKR 433
LS E + K + PG RR++
Sbjct: 456 LSEAELSKLAMNKIRKTVKPGMVRRQK 482
>gi|33240809|ref|NP_875751.1| signal recognition particle protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238338|gb|AAQ00404.1| Signal recognition particle GTPase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 485
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/399 (55%), Positives = 301/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++ +RRALLEADVSL VV++FVQ V ++A+G ++RGV P Q+ +++V ELV++MGG
Sbjct: 31 LKQVRRALLEADVSLSVVKQFVQEVRDKAIGAEVVRGVNPGQKFIEVVHQELVEVMGGAN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L + +P+VIL+AGLQG GKTT +AKL YLK +G ++VA DVYRPAAIDQL L
Sbjct: 91 SPLADSTKKPSVILMAGLQGAGKTTAAAKLGLYLKDKGLKPLMVAADVYRPAAIDQLNTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ V V++ G E KP IA GL++A++++ D +IVDTAGRLQID+ MM+E+ ++
Sbjct: 151 GKQINVEVFSLGKESKPEDIAASGLKKAQEEDFDTLIVDTAGRLQIDEEMMNEMVRIRSA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VSG+PIK
Sbjct: 211 VDPDEVLLVVDSMIGQEAADLTRAFHEKVGITGAVLTKLDGDSRGGAALSIRKVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMAGRILGMGDVL+ VEKAQ+ ++ DAE+MQ+K A FDF+
Sbjct: 271 FIGTGEKVEALQPFHPERMAGRILGMGDVLTLVEKAQKEVEIADAEQMQRKFQEATFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF+KQ R + RMGS+ ++ MIPGM KI ++ E LK +EAMI +MT E+ +PEL
Sbjct: 331 DFVKQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKSGEDQLKRIEAMIGSMTNAEQTQPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RRKRVA SG T +V +++A +MR MK +
Sbjct: 391 LAAQPSRRKRVAFGSGHTPVEVDKVLADFQKMRGLMKQM 429
>gi|72382692|ref|YP_292047.1| signal recognition particle protein [Prochlorococcus marinus str.
NATL2A]
gi|72002542|gb|AAZ58344.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Prochlorococcus marinus str. NATL2A]
Length = 487
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/399 (55%), Positives = 295/399 (73%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++ +RRALL+ADVSL VV+ F+ V +AVG ++RG+ P Q+ +++V +ELV +MGGE
Sbjct: 31 LKQVRRALLDADVSLSVVKEFIDEVRVKAVGTEVVRGIDPGQKFIQVVHEELVNVMGGEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L ++ +PTVIL+AGLQG GKTT +AKL LK++ K +LVA D YRPAAIDQLV L
Sbjct: 91 DPLANSEEQPTVILMAGLQGAGKTTATAKLGLLLKEKNKKPLLVAADTYRPAAIDQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ V V+ + +KP +IAK+GLE+AK + D V+VDTAGRLQID MM E+ +K
Sbjct: 151 GKQIDVEVFNLSSNLKPEEIAKKGLEKAKNEGFDTVLVDTAGRLQIDTDMMGEMVRIKEA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA + +F+ ++GITGA+LTKLDGDSRGGAALS++++SGKPIK
Sbjct: 211 VQPDEVLLVVDSMIGQEAADITRSFHEKVGITGAVLTKLDGDSRGGAALSIRKISGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PFYP+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQKK+ A FDF+
Sbjct: 271 FIGTGEKVEALQPFYPERMASRILGMGDVLTLVEKAQKEVEIADAEIMQKKLQEATFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF+KQ R + RMGS+ ++ MIPGM KI ++ E LK +EAMI +M+ EER KPEL
Sbjct: 331 DFVKQMRMIKRMGSLGGLLKMIPGMNKIDDGMIKSGEDQLKKIEAMIGSMSVEERNKPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+RVA SG V +++A +MR MK +
Sbjct: 391 LAAQPSRRRRVASGSGHKPADVDKVLADFQRMRGLMKQM 429
>gi|86605764|ref|YP_474527.1| signal recognition particle protein [Synechococcus sp. JA-3-3Ab]
gi|86554306|gb|ABC99264.1| signal recognition particle protein [Synechococcus sp. JA-3-3Ab]
Length = 483
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/411 (55%), Positives = 304/411 (73%), Gaps = 5/411 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALL+ADV+L VV++F++ V + A+G +I GV PDQQ +KIV DELVK+MG
Sbjct: 31 LREVRRALLDADVNLQVVKQFIEDVRQAALGAEVILGVTPDQQFIKIVHDELVKVMGEAN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ A+ PT++++ GLQG GKTT AKLA YL+KQGK +LVAGD+YRPAAIDQL L
Sbjct: 91 VPIAQAEQPPTIVVMVGLQGSGKTTTCAKLALYLRKQGKRPLLVAGDIYRPAAIDQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV+ G + P +IA+QG+ A+++ D VI+DTAGRLQID MM EL+ +K
Sbjct: 151 GQQIQIPVFDLG-KTDPVEIARQGVAAAREQGYDYVILDTAGRLQIDLEMMAELERIKAA 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQEAA L F+ +G+TG ILTKLDGDSRGGAALS+++VSG+PIK
Sbjct: 210 VQPHEILLVVDAMIGQEAANLTQAFHERLGLTGTILTKLDGDSRGGAALSIRQVSGQPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E L+PFYPDRMA RILGMGD+LS VEKAQE + DA M +K+M+A FDF
Sbjct: 270 FVGVGEKVEALDPFYPDRMASRILGMGDILSLVEKAQEEIDLGDAARMAEKMMTAQFDFT 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ R + RMGS++ ++ ++PGMGKI+ Q+++ + L EAMI +MTPEER P+L
Sbjct: 330 DFLKQMRLIKRMGSLAGLLRLMPGMGKISEEQLQKGQDQLARAEAMINSMTPEERRNPDL 389
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
LA S R++RVA SG + VS+LV+ FQ RM+++M M G L +
Sbjct: 390 LARSVSRKRRVALGSGHKLEDVSRLVSD-FQ---RMRDMMRSMSLGGLAGM 436
>gi|113955128|ref|YP_729980.1| signal recognition particle protein [Synechococcus sp. CC9311]
gi|113882479|gb|ABI47437.1| signal recognition particle protein [Synechococcus sp. CC9311]
Length = 493
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/399 (54%), Positives = 296/399 (74%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADVSLPVV+ FV V E+AVG ++RGV PDQ+ +++V ++LV +MGG
Sbjct: 31 LKEVRRALLEADVSLPVVKDFVSEVREKAVGAEVVRGVTPDQKFIQVVHEQLVDVMGGGN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+QL L
Sbjct: 91 APLAQADQAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRKALMVGADVYRPAAIEQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+GV V++ G E KP IA GL +AK++ D ++VDTAGRLQID MM+E+ ++
Sbjct: 151 GGQIGVDVFSLGIEAKPEDIAAAGLAKAKEEGYDTLLVDTAGRLQIDSEMMEEMVRIRSA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VSG+PIK
Sbjct: 211 VQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAALSIRKVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A+FDF+
Sbjct: 271 FIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEASFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +MT ER +PEL
Sbjct: 331 DFLQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKKIEAMIGSMTAAERTQPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+R+A G V +++A +MR M+ +
Sbjct: 391 LAAQPSRRRRIASGCGYQAADVDKVLADFQKMRGFMQQM 429
>gi|427702484|ref|YP_007045706.1| signal recognition particle protein [Cyanobium gracile PCC 6307]
gi|427345652|gb|AFY28365.1| signal recognition particle protein [Cyanobium gracile PCC 6307]
Length = 496
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/399 (54%), Positives = 293/399 (73%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+RD+RRALLEADVSLPVV+ F++ V +AVG ++RGV PDQQ +++V +LV+ MGG
Sbjct: 31 LRDVRRALLEADVSLPVVKEFIEEVRRKAVGAEVVRGVSPDQQFIQLVHAQLVETMGGAN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A PTVIL+AGLQG GKTT +AKL +LK+QG+ +LVA DVYRPAAIDQL L
Sbjct: 91 APLARAAEGPTVILMAGLQGAGKTTATAKLGLHLKEQGRRPLLVAADVYRPAAIDQLQTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+GV V++ G+E P IA G+ +++ D V+VDTAGRLQID AMM E+ ++
Sbjct: 151 GRQIGVEVFSLGSEASPEAIAAAGVARGREEGFDTVLVDTAGRLQIDTAMMGEMVRIREA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VSG PIK
Sbjct: 211 AAPDEVLLVVDSMIGQEAADLTRAFHEQVGITGAVLTKLDGDSRGGAALSIRKVSGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMA RILGMGDVL+ VEKA + ++ D E+MQ+K+ A+FDF+
Sbjct: 271 FIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKATKEVELADVEKMQRKLQEASFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF++Q R + RMGS+ ++ +IPGM KI +R+ E LK +EAMI +MT ER +PEL
Sbjct: 331 DFVQQMRLIKRMGSLGGLMKLIPGMNKIDDGMLRQGESQLKRIEAMIGSMTEAERRQPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+R+A SG T V +++A +MR M+ +
Sbjct: 391 LAAQPSRRRRIAAGSGHTPADVDKVLADFQKMRGFMQQM 429
>gi|116073373|ref|ZP_01470635.1| signal recognition particle protein [Synechococcus sp. RS9916]
gi|116068678|gb|EAU74430.1| signal recognition particle protein [Synechococcus sp. RS9916]
Length = 499
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/399 (53%), Positives = 298/399 (74%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADVSLPVV+ FV V E+AVG ++RGV PDQ+ +++V ++LV++MGG
Sbjct: 31 LKEVRRALLEADVSLPVVKDFVAEVREKAVGAEVVRGVSPDQKFIQVVHEQLVEVMGGGN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+QL L
Sbjct: 91 APLAKADQAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRRALMVGADVYRPAAIEQLRTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ V V++ G E KP IA GL +AK++ D ++VDTAGRLQID +MM+E+ ++
Sbjct: 151 GEQIDVEVFSLGAEAKPEDIAAAGLAKAKEEGFDTLLVDTAGRLQIDTSMMEEMVRIRTA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VSG+PIK
Sbjct: 211 VQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAALSIRKVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A+FDF+
Sbjct: 271 FMGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEASFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q R + RMGS+ ++ MIPGM K+ +++ E+ LK +EAMI +MT ER +PEL
Sbjct: 331 DFLQQMRLIKRMGSLGGLMKMIPGMNKLDDGMLKQGEQQLKKIEAMIGSMTAAERTQPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+R+A G V +++A +MR M+ +
Sbjct: 391 LAAQPSRRRRIAAGCGYQPADVDKVLADFQKMRGFMQQM 429
>gi|87301099|ref|ZP_01083940.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
5701]
gi|87284067|gb|EAQ76020.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
5701]
Length = 492
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/399 (53%), Positives = 296/399 (74%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++ +RRALLEADVSL VV+ F++ V QAVG ++RGV PDQQ +++V LV++MGGE
Sbjct: 31 LKQVRRALLEADVSLEVVKGFIEEVRTQAVGAEVVRGVSPDQQFIQLVHQALVEVMGGEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A PTVIL+AGLQG GKTT +AKL +LK+QGK ++VA DVYRPAAIDQL L
Sbjct: 91 APLAVADQAPTVILMAGLQGAGKTTATAKLGLHLKEQGKRALMVAADVYRPAAIDQLQTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV V++ G + +P IA G+ AK++ D V+VDTAGRLQID AMM+E+ +++
Sbjct: 151 GQQIGVEVFSLGADARPEDIAAAGIARAKEEGFDTVLVDTAGRLQIDTAMMEEMVRIRQA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P EVLLVVD+M GQEAA L F+ ++G+TGA+LTKLDGDSRGGAALS+++VSG PIK
Sbjct: 211 AAPDEVLLVVDSMIGQEAAELTRAFHEQVGLTGAVLTKLDGDSRGGAALSIRKVSGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMA RILGMGDVL+ VEKA + ++ D +MQ+K+ A+FDF+
Sbjct: 271 FIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKASKEVELADVAKMQQKLQEASFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q R + RMGS+ ++ +IPGM KI +++ E+ L +EAMI +MT ERE+P+L
Sbjct: 331 DFLQQMRMIKRMGSLGGLMKLIPGMNKIDDGMLKQGEEQLGKIEAMIGSMTAAEREQPQL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+R+A SG + V +++A +MR M+ +
Sbjct: 391 LAAQPSRRRRIAAGSGHSPADVDKVLADFQKMRGFMQQM 429
>gi|194476608|ref|YP_002048787.1| signal recognition particle protein (SRP54) [Paulinella
chromatophora]
gi|171191615|gb|ACB42577.1| signal recognition particle protein (SRP54) [Paulinella
chromatophora]
Length = 481
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/399 (52%), Positives = 296/399 (74%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++ +RRAL+EADVSL VV+ F++ V +++G+ ++RG++PDQ+ +++V ++L+++MG
Sbjct: 31 LKQVRRALIEADVSLVVVKEFMEEVRSKSIGIEVVRGIKPDQKFIQVVYEQLIEIMGANN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L TV+L+AGLQG GKTT +AKLA YLK QG+ ++VA DVYRPAAIDQL +L
Sbjct: 91 TPLHKQSHTVTVVLMAGLQGAGKTTAAAKLALYLKNQGEKVLMVAADVYRPAAIDQLFVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ V V+T E P IA GL++A ++ D +IVDTAGRLQID AMM E+ ++
Sbjct: 151 GKQIDVEVFTLNPESIPEDIAAAGLQKAIREGFDYLIVDTAGRLQIDTAMMQEMVRIRSA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+LLVVD+M GQEAA L F+ +IGITGA+LTKLDGD+RGGAALS+++VSG PIK
Sbjct: 211 VNPNEILLVVDSMIGQEAAELTRAFHEQIGITGAVLTKLDGDARGGAALSIRKVSGAPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMA RILGMGD+++ VEKAQE ++ D E+MQ+K+ A+FDF+
Sbjct: 271 FIGTGEKVEALQPFHPERMASRILGMGDIVTLVEKAQEEVELADVEKMQRKLQEASFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q R V RMGS+ ++ MIPGM KI +RE E LK +E+MI +MTP EREKPEL
Sbjct: 331 DFLQQMRLVKRMGSLGGLMKMIPGMNKIDSTMLREGEAQLKRIESMIGSMTPTEREKPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR R+A+ SG V +++ +MR M+ +
Sbjct: 391 LASQPSRRGRIAKGSGHKIADVDKMLVDFQKMRGFMQQM 429
>gi|352096234|ref|ZP_08957114.1| signal recognition particle protein [Synechococcus sp. WH 8016]
gi|351676928|gb|EHA60079.1| signal recognition particle protein [Synechococcus sp. WH 8016]
Length = 496
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/399 (53%), Positives = 296/399 (74%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL+ADVSLPVV+ FV V E+AVG ++RGV PDQ+ +++V ++LV +MGG
Sbjct: 31 LKEVRRALLDADVSLPVVKDFVSEVREKAVGAEVVRGVTPDQKFIQVVHEQLVDVMGGGN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+QL L
Sbjct: 91 APLAKADQAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRKALMVGADVYRPAAIEQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+GV V++ G E KP IA GL +AK++ D ++VDTAGRLQID MM+E+ ++
Sbjct: 151 GGQIGVDVFSLGIEAKPEDIAAAGLAKAKQEGYDTLLVDTAGRLQIDSEMMEEMVRIRGA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VSG+PIK
Sbjct: 211 VQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAALSIRKVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A+FDF+
Sbjct: 271 FIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEASFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF++Q R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +MT ER +PEL
Sbjct: 331 DFVQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKKIEAMIGSMTEAERTQPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+R+A G V +++A +MR M+ +
Sbjct: 391 LAAQPSRRRRIASGCGYQAADVDKVLADFQKMRGVMQQM 429
>gi|318042117|ref|ZP_07974073.1| signal recognition particle protein [Synechococcus sp. CB0101]
Length = 487
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/401 (52%), Positives = 297/401 (74%), Gaps = 2/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADVSLPVV+ FV V ++A+G ++RG+ PDQ+ +++V ++LV MGGE
Sbjct: 31 LKEVRRALLEADVSLPVVKDFVDEVRKKALGAEVVRGISPDQKFIQVVHEQLVDTMGGEN 90
Query: 61 SELVFAK--SRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLV 118
+ L P+V+L+AGLQG GKTT +AKL +LK+QG+ +LV DVYRPAAIDQL
Sbjct: 91 APLAAGGKPGEPSVVLMAGLQGAGKTTATAKLGLHLKEQGRKALLVGADVYRPAAIDQLK 150
Query: 119 ILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVK 178
LG Q+GV V++ GT+ KP IA G+E+AK + D V+VDTAGRLQID++MM+E+ ++
Sbjct: 151 TLGGQIGVEVFSLGTDAKPEAIAAAGIEKAKAEGFDTVLVDTAGRLQIDESMMEEMVRIR 210
Query: 179 RVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKP 238
+P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VSG P
Sbjct: 211 EACSPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAALSIRKVSGAP 270
Query: 239 IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 298
IK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D +MQ+K+ A FD
Sbjct: 271 IKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVAKMQQKLQEATFD 330
Query: 299 FNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
F+DF++Q R + RMGS+ ++ +IPGM KI +++ E+ LK +EAMI +MT ER P
Sbjct: 331 FSDFVQQMRLIKRMGSLGGLMKLIPGMNKIDDGMLKQGEEQLKKIEAMISSMTEAERRDP 390
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LLA +P RR+R+A SG T V +++ QMR M+ +
Sbjct: 391 DLLAANPSRRRRIASGSGHTSADVDKVLQNFQQMRGFMQQM 431
>gi|126696809|ref|YP_001091695.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9301]
gi|126543852|gb|ABO18094.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9301]
Length = 492
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/400 (53%), Positives = 298/400 (74%), Gaps = 1/400 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++RALL+ADVSL VV+ F+ V ++A+G ++RGV P Q+ +++V EL+K+MG E
Sbjct: 31 LKEVKRALLDADVSLSVVKEFITDVKDKAIGEEVVRGVNPGQKFIEVVNKELIKIMGNEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L ++ PTVIL+AGLQG GKTT + KL YLK++ K +LVA D+YRPAA++QL L
Sbjct: 91 SPLNENENSPTVILMAGLQGAGKTTATGKLGLYLKEKDKKVLLVAADIYRPAAVEQLKTL 150
Query: 121 GEQVGVPVYTAGTE-VKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
G Q + V++A + KP +IAK+ L A + + + +I+DTAGRLQID +MM E+ +K
Sbjct: 151 GSQYELEVFSAKEKNSKPEEIAKEALNFANENDFNSIIIDTAGRLQIDDSMMSEMVRIKE 210
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP EVLLVVD+M GQEAA L +F+ ++GITGAILTKLDGDSRGGAALS++++SGKPI
Sbjct: 211 VSNPDEVLLVVDSMIGQEAADLTKSFHEKVGITGAILTKLDGDSRGGAALSIRKISGKPI 270
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQKK+ A FDF
Sbjct: 271 KFIGVGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEAMQKKLQEATFDF 330
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF+KQ R + RMGS+ +I +IPGM KI +++ E LK +E+MI +MT EE++KPE
Sbjct: 331 NDFVKQMRLIKRMGSLGGLIKLIPGMNKIDDGMIKDGEDQLKKIESMISSMTLEEKQKPE 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 391 VLAAQPSRRQRIAQGSGYEAKDVDKVLADFQRMRGFMKQM 430
>gi|317969124|ref|ZP_07970514.1| signal recognition particle protein [Synechococcus sp. CB0205]
Length = 488
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/401 (53%), Positives = 299/401 (74%), Gaps = 2/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALLEADVSLPVV+ FV+ V ++A+G ++RG+ PDQ+ +++V ++LV+ MGGE
Sbjct: 31 LKDVRRALLEADVSLPVVKDFVEEVRKKALGEEVVRGISPDQKFIQVVHEQLVETMGGEN 90
Query: 61 SELVFA--KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLV 118
+ L A + P V+L+AGLQG GKTT +AKL +LK++G+ +LV DVYRPAAI+QL
Sbjct: 91 APLAPAGKEGAPAVVLMAGLQGAGKTTATAKLGLHLKEKGRRALLVGADVYRPAAIEQLK 150
Query: 119 ILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVK 178
LG Q+GV V++ GT+ KP IA G+E+AK + D V+VDTAGRLQID +MM+E+ ++
Sbjct: 151 TLGGQIGVEVFSLGTDAKPEAIAAAGIEKAKAEGFDTVLVDTAGRLQIDTSMMEEMVRIR 210
Query: 179 RVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKP 238
+ P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VSG P
Sbjct: 211 EAVQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAALSIRKVSGAP 270
Query: 239 IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 298
IK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D +MQ+K+ A FD
Sbjct: 271 IKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVAKMQQKLQEATFD 330
Query: 299 FNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
F+DF+KQ R + RMGS+ ++ MIPGM KI +++ E+ LK +EAM+ +MT ER P
Sbjct: 331 FSDFIKQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEEQLKKIEAMVGSMTEAERCDP 390
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LLA +P RR+R+A SG T V +++ QMR M+ +
Sbjct: 391 DLLAANPSRRRRIASGSGHTPADVDKVLQNFQQMRGFMQQM 431
>gi|254432051|ref|ZP_05045754.1| signal recognition particle protein [Cyanobium sp. PCC 7001]
gi|197626504|gb|EDY39063.1| signal recognition particle protein [Cyanobium sp. PCC 7001]
Length = 494
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/401 (52%), Positives = 298/401 (74%), Gaps = 2/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALLEADVSLPVV+ FV V +AVG ++RG+ PDQ+ +++V ++LV MGGE
Sbjct: 31 LKDVRRALLEADVSLPVVKDFVDEVRRKAVGAEVVRGISPDQKFIQVVHEQLVDTMGGEN 90
Query: 61 SELVFA--KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLV 118
+ L P+V+L+AGLQG GKTT +AKL +LK+QG+ +LV DVYRPAAI+QL
Sbjct: 91 APLAAGGKPGEPSVVLMAGLQGAGKTTATAKLGLHLKEQGRRALLVGADVYRPAAIEQLR 150
Query: 119 ILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVK 178
LG Q+GV V++ GTE +P IA G+E+A+++ D V+VDTAGRLQID +MM+E+ ++
Sbjct: 151 TLGGQIGVEVFSLGTEARPEDIAAAGVEKAREEGFDTVLVDTAGRLQIDTSMMEEMVRIR 210
Query: 179 RVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKP 238
+ P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VSG P
Sbjct: 211 EAVQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAALSIRKVSGAP 270
Query: 239 IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 298
IK +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D MQ+K+ A+FD
Sbjct: 271 IKFIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVARMQQKLQEASFD 330
Query: 299 FNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
F+DF++Q R + RMGS+ ++ MIPGM KI +++ E+ L +E+MI +MT ERE P
Sbjct: 331 FSDFVQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLGKIESMISSMTAAERENP 390
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LLA P RR+R+A+ SG T +V +++A +MR M+ +
Sbjct: 391 DLLALMPSRRRRIAKGSGHTPAEVDKVLADFQRMRGFMQQM 431
>gi|159478459|ref|XP_001697320.1| chloroplast SRP54 subunit of signal recognition particle
[Chlamydomonas reinhardtii]
gi|158274478|gb|EDP00260.1| chloroplast SRP54 subunit of signal recognition particle
[Chlamydomonas reinhardtii]
Length = 549
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/464 (50%), Positives = 316/464 (68%), Gaps = 17/464 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADVSLPVVRRF++ V E+A+G + G + +V L +G
Sbjct: 96 LKEVRRALLEADVSLPVVRRFIKKVEERALGTKVREGRAMGTKWKSVVNCPLQDGLGNRG 155
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ + G +GVGKTT + KLA YLKK KSC+LVA DVYRPAAIDQLV L
Sbjct: 156 VGRARTEVGHRAACVHGARGVGKTTAAGKLALYLKKAKKSCLLVATDVYRPAAIDQLVKL 215
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G + VPV+ GT+V P +IAK+G+EEA++ VD VI+DTAGRLQ+D+ MM EL+DVK
Sbjct: 216 GAAIDVPVFEMGTDVSPVEIAKKGVEEARRLGVDAVIIDTAGRLQVDEGMMAELRDVKSA 275
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P++ LLVVDAMTGQEAA LV +FN + I+GAILTK+DGDSRGGAALSV+EVSGKPIK
Sbjct: 276 VRPSDTLLVVDAMTGQEAANLVRSFNEAVDISGAILTKMDGDSRGGAALSVREVSGKPIK 335
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+ME LEPFYP+RMA RILGMGDVL+ EKA+ +++EDA++ +++M FDFN
Sbjct: 336 FVGVGEKMEALEPFYPERMASRILGMGDVLTLYEKAEAAIKEEDAQKTMERLMEEKFDFN 395
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + MG + +++ M+PG KI+ Q+ EAEK + EA+I AM EER PE+
Sbjct: 396 DFLNQWKAMNNMGGL-QMLKMMPGFNKISEKQLYEAEKQFGVYEAIIGAMDEEERSNPEV 454
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVR---MKNLMGVMEGGSLPALSN--LE 415
L ++ RR+RVAQDSGK+E +V++L+A M+ + M L+ + + G+ P +N L+
Sbjct: 455 LIKNLARRRRVAQDSGKSEAEVTKLMAAYTSMKAQVGGMSKLLKLQKAGADPQKANSLLQ 514
Query: 416 DALKSE-QKAPPGTARRKRRSESRRQFVDPASTRPSPRGFGGGS 458
+ + S +K PG RRK+ E P S RGFG S
Sbjct: 515 ELVASAGKKVAPGKVRRKKEKE-------PLS---KARGFGSSS 548
>gi|78779766|ref|YP_397878.1| signal recognition particle protein [Prochlorococcus marinus str.
MIT 9312]
gi|78713265|gb|ABB50442.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Prochlorococcus marinus str. MIT 9312]
Length = 489
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/400 (53%), Positives = 295/400 (73%), Gaps = 1/400 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++RALL+ADVSL VV+ F+ V ++A+G ++RGV P Q+ +++V EL+ +MG E
Sbjct: 31 LKEVKRALLDADVSLSVVKEFISDVKDKAIGEEVVRGVNPGQKFIEVVNKELINIMGNEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L +S PTVIL+AGLQG GKTT + KL YLK++ K +LVA D+YRPAA++QL L
Sbjct: 91 SPLNENQSSPTVILMAGLQGAGKTTATGKLGLYLKEKDKKVLLVAADIYRPAAVEQLKTL 150
Query: 121 GEQVGVPVYTAGTE-VKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
G Q + V++A + KP +I K L A + N + +I+DTAGRLQID +MM E+ +K
Sbjct: 151 GSQYDLEVFSAKEKNSKPEEITKDALNYANENNFNSIIIDTAGRLQIDDSMMSEMVRIKE 210
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP EVLLVVD+M GQEAA L +F+ ++GI+GAILTKLDGDSRGGAALS++++SGKPI
Sbjct: 211 VSNPDEVLLVVDSMIGQEAADLTKSFHEKVGISGAILTKLDGDSRGGAALSIRKISGKPI 270
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQKK+ A FDF
Sbjct: 271 KFIGVGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEVMQKKLQEATFDF 330
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF+KQ R + RMGS+ +I +IPGM KI +++ E LK +E+MI +MT EE++KPE
Sbjct: 331 NDFVKQMRLIKRMGSLGGLIKLIPGMNKIDDGMIKDGEYQLKKIESMISSMTLEEKQKPE 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 391 VLAAQPSRRQRIAQGSGYEAKDVDKVLADFQRMRGFMKQM 430
>gi|123969017|ref|YP_001009875.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. AS9601]
gi|123199127|gb|ABM70768.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. AS9601]
Length = 498
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/400 (52%), Positives = 296/400 (74%), Gaps = 1/400 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++RALL+ADVSL VV+ F+ V ++A+G ++RGV P Q+ +++V EL+ +MG E
Sbjct: 31 LKEVKRALLDADVSLSVVKEFISDVKDKAIGEEVVRGVNPGQKFIEVVNKELINIMGNEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L + PTVIL+AGLQG GKTT + KL YLK++ K +LVA D+YRPAA++QL L
Sbjct: 91 SPLNENEKSPTVILMAGLQGAGKTTATGKLGLYLKEKDKKVLLVAADIYRPAAVEQLKTL 150
Query: 121 GEQVGVPVYTAGTE-VKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
G Q + V++A + KP +IAK+ L A + + + +I+DTAGRLQID +MM E+ +K
Sbjct: 151 GSQYELEVFSAKEKNSKPEEIAKEALNFANENDFNSIIIDTAGRLQIDDSMMSEMVRIKE 210
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP E+LLVVD+M GQEAA L +F+ ++GITGAILTKLDGDSRGGAALS++++SGKPI
Sbjct: 211 VSNPDEILLVVDSMIGQEAADLTKSFHEKVGITGAILTKLDGDSRGGAALSIRKISGKPI 270
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQKK+ A FDF
Sbjct: 271 KFIGVGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEAMQKKLQEATFDF 330
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF+KQ R + RMGS+ +I +IPGM KI +++ E LK +E+MI +MT EE++KPE
Sbjct: 331 NDFVKQMRLIKRMGSLGGLIKLIPGMNKIDDGMIKDGEDQLKKIESMISSMTLEEKQKPE 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 391 VLAAHPSRRQRIAQGSGYEAKDVDKVLADFQRMRGFMKQM 430
>gi|148240067|ref|YP_001225454.1| Signal recognition particle protein [Synechococcus sp. WH 7803]
gi|147848606|emb|CAK24157.1| Signal recognition particle protein [Synechococcus sp. WH 7803]
Length = 523
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/399 (54%), Positives = 301/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALLEADVSLPVV+ FV V E+AVG ++RGV PDQ+ +++V ++LV++MGG
Sbjct: 60 LKDVRRALLEADVSLPVVKAFVADVREKAVGSDVVRGVSPDQKFIQVVHEQLVEVMGGGN 119
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A++ PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+QL L
Sbjct: 120 APLAQAETAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRRALMVGADVYRPAAIEQLKTL 179
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+GV V++ G + KP IA GL +AK++ D ++VDTAGRLQID MM+E+ ++
Sbjct: 180 GGQIGVEVFSLGADAKPEAIAAAGLAKAKEEGFDTLLVDTAGRLQIDSEMMEEMVRIRTA 239
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VSG+PIK
Sbjct: 240 VQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAALSIRKVSGQPIK 299
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A FDF+
Sbjct: 300 FIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEATFDFS 359
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF++Q R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +MT +ERE P+L
Sbjct: 360 DFVQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKKIEAMIGSMTQQERENPDL 419
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+R+A+ SG V +++A +MR M+ +
Sbjct: 420 LAGQPSRRRRIARGSGHQPADVDKVLADFQKMRGFMQQM 458
>gi|123966680|ref|YP_001011761.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9515]
gi|123201046|gb|ABM72654.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9515]
Length = 492
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/400 (53%), Positives = 296/400 (74%), Gaps = 1/400 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++ +++ALL+ADVSL VV+ FV V ++A+G ++RGV P Q+ +++V EL+ +MG E
Sbjct: 31 LKQVKKALLDADVSLSVVKEFVSDVKDKAIGEDVVRGVNPGQKFIEVVNKELINVMGNEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L ++ PTVIL+AGLQG GKTT + KL YLK++ K +LVA D+YRPAA++QL +
Sbjct: 91 SPLFEKETPPTVILMAGLQGAGKTTATGKLGLYLKEKEKKVLLVAADIYRPAAVEQLKTI 150
Query: 121 GEQVGVPVYTAG-TEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
G Q + V++A + KP +IAK L A + NVD +IVDTAGRLQID+ MM E+ +K
Sbjct: 151 GNQYDLEVFSAKEKDSKPEEIAKDALIYANENNVDTLIVDTAGRLQIDELMMSEMVRIKE 210
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP EVLLVVD+M GQEAA L +F+ ++GI+GAILTKLDGDSRGGAALS++++SGKPI
Sbjct: 211 VTNPDEVLLVVDSMIGQEAADLTKSFHEKVGISGAILTKLDGDSRGGAALSIRKISGKPI 270
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQKK+ A FDF
Sbjct: 271 KFIGTGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEVMQKKLQEATFDF 330
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF+KQ R + RMGS+ +I +IPGM KI ++ E+ LK +E+MI +MT EE++KPE
Sbjct: 331 NDFVKQMRLMKRMGSLGGLIKLIPGMNKIDDGMIKNGEEQLKKIESMISSMTLEEKQKPE 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 391 VLAAQPSRRQRIAQGSGYQAKDVDKVLADFQRMRGFMKQM 430
>gi|157413847|ref|YP_001484713.1| signal recognition particle protein [Prochlorococcus marinus str.
MIT 9215]
gi|157388422|gb|ABV51127.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9215]
Length = 492
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/400 (53%), Positives = 294/400 (73%), Gaps = 1/400 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+ ++RALL+ADVSL VV+ F+ V E+A+G ++RGV P Q+ +++V EL+ +MG E
Sbjct: 31 LNQVKRALLDADVSLSVVKDFISEVKEKAIGEEVVRGVNPGQKFIEVVNKELINIMGNEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L K+ PTVIL+AGLQG GKTT + KL YLK++ K +LVA D+YRPAA++QL L
Sbjct: 91 SPLNENKNSPTVILMAGLQGAGKTTATGKLGLYLKEKDKKVLLVAADIYRPAAVEQLKTL 150
Query: 121 GEQVGVPVYTAGTE-VKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
G Q + V++A + KP IAK L A++ + + +I+DTAGRLQID +MM E+ +K
Sbjct: 151 GSQYDLEVFSAKEKNCKPEVIAKDALNFARENDFNSIIIDTAGRLQIDDSMMSEMVRIKE 210
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP EVLLVVD+M GQEAA L +F+ ++GI+GAILTKLDGDSRGGAALS++++SGKPI
Sbjct: 211 VSNPDEVLLVVDSMIGQEAADLTKSFHEKVGISGAILTKLDGDSRGGAALSIRKISGKPI 270
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQ+K+ A FDF
Sbjct: 271 KFIGVGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEAMQRKLQEATFDF 330
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF+KQ R + RMGS+ +I +IPGM KI +++ E LK +E+MI +MT EE++KPE
Sbjct: 331 NDFVKQMRLIKRMGSLGGLIKLIPGMNKIDDGMIKDGEDQLKKIESMISSMTLEEKQKPE 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 391 VLAAQPSRRQRIAQGSGYEAKDVDKVLADFQRMRGFMKQM 430
>gi|88809131|ref|ZP_01124640.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
7805]
gi|88787073|gb|EAR18231.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH
7805]
Length = 489
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/399 (54%), Positives = 300/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALLEADVSLPVV+ FV V E+AVG ++RGV PDQ+ +++V ++LV++MGG
Sbjct: 31 LKDVRRALLEADVSLPVVKDFVADVREKAVGSDVVRGVSPDQKFIQVVHEQLVEVMGGGN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A+ PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+QL L
Sbjct: 91 APLAQAEEAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRRALMVGADVYRPAAIEQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+GV V++ G + KP IA GL +AK++ D ++VDTAGRLQID MM+E+ ++
Sbjct: 151 GGQIGVEVFSLGADAKPEAIAAAGLAKAKEEGFDTLLVDTAGRLQIDTEMMEEMVRIRTA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VSG+PIK
Sbjct: 211 VQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAALSIRKVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A FDF+
Sbjct: 271 FIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEATFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF++Q R + RMGS+ ++ MIPGM KI +++ E+ LK +EAMI +MT +ERE P+L
Sbjct: 331 DFVQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEQQLKKIEAMIGSMTQQERENPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+R+A+ SG V +++A +MR M+ +
Sbjct: 391 LAGQPSRRRRIARGSGHQPADVDKVLADFQKMRGFMQQM 429
>gi|33861842|ref|NP_893403.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|33640210|emb|CAE19745.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 498
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/400 (52%), Positives = 296/400 (74%), Gaps = 1/400 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++ +++ALL+ADVSL VV+ FV V ++A+G ++RGV P Q+ +++V EL+ +MG E
Sbjct: 31 LKQVKKALLDADVSLSVVKEFVSDVKDKAIGEEVVRGVNPGQKFIEVVNKELINIMGNEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L ++ PTVIL+AGLQG GKTT + KL YLK++ + +LVA D+YRPAA++QL +
Sbjct: 91 SPLNKKETTPTVILMAGLQGAGKTTATGKLGLYLKEKEEKVLLVAADIYRPAAVEQLKTI 150
Query: 121 GEQVGVPVYTAGTE-VKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
G Q + V++A + KP +IA+ L A N+D +IVDTAGRLQID++MM E+ +K+
Sbjct: 151 GNQYDLEVFSAKEKNSKPEEIARDALSYANANNIDTLIVDTAGRLQIDESMMGEMVRIKQ 210
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P EVLLVVD+M GQEAA L +F+ ++GITGAILTKLDGDSRGGAALS++++SGKPI
Sbjct: 211 VTKPDEVLLVVDSMIGQEAADLTKSFHEKVGITGAILTKLDGDSRGGAALSIRKISGKPI 270
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQKK+ A FDF
Sbjct: 271 KFIGTGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEVMQKKLQEATFDF 330
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF+KQ R + RMGS+ +I +IPGM KI ++ E+ LK +E+MI +MT EE++KPE
Sbjct: 331 NDFVKQMRLMKRMGSLGGLIKLIPGMNKIDDGMIKNGEEQLKKIESMISSMTLEEKQKPE 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 391 VLAAQPSRRQRIAQGSGYQAKDVDKVLADFQRMRGFMKQM 430
>gi|254525556|ref|ZP_05137608.1| signal recognition particle protein [Prochlorococcus marinus str.
MIT 9202]
gi|221536980|gb|EEE39433.1| signal recognition particle protein [Prochlorococcus marinus str.
MIT 9202]
Length = 486
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/400 (52%), Positives = 293/400 (73%), Gaps = 1/400 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+ ++RALL+ADVSL VV+ F+ V E+A+G ++RGV P Q+ +++V EL+ +MG E
Sbjct: 31 LNQVKRALLDADVSLSVVKDFISEVKEKAIGEEVVRGVNPGQKFIEVVNKELINIMGNEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L ++ PTVIL+AGLQG GKTT + KL YLK + K +LVA D+YRPAA++QL L
Sbjct: 91 SPLNENENSPTVILMAGLQGAGKTTATGKLGLYLKAKDKKVLLVAADIYRPAAVEQLKTL 150
Query: 121 GEQVGVPVYTAGTE-VKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
G Q + V++A + KP IAK L A++ + + +I+DTAGRLQID +MM E+ +K
Sbjct: 151 GSQYDLEVFSAKEKNCKPEVIAKDALNFARENDFNSIIIDTAGRLQIDDSMMSEMVRIKE 210
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP EVLLVVD+M GQEAA L +F+ ++GI+GAILTKLDGDSRGGAALS++++SGKPI
Sbjct: 211 VSNPDEVLLVVDSMIGQEAADLTKSFHEKVGISGAILTKLDGDSRGGAALSIRKISGKPI 270
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ DAE MQ+K+ A FDF
Sbjct: 271 KFIGVGEKIEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADAEAMQRKLQEATFDF 330
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF+KQ R + RMGS+ +I +IPGM KI +++ E LK +E+MI +MT EE++KPE
Sbjct: 331 NDFVKQMRLIKRMGSLGGLIKLIPGMNKIDDGMIKDGEDQLKKIESMISSMTLEEKQKPE 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LA P RR+R+AQ SG + V +++A +MR MK +
Sbjct: 391 VLAAQPSRRQRIAQGSGYEAKDVDKVLADFQRMRGFMKQM 430
>gi|78185084|ref|YP_377519.1| Signal recognition particle protein [Synechococcus sp. CC9902]
gi|78169378|gb|ABB26475.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechococcus sp. CC9902]
Length = 492
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/399 (54%), Positives = 296/399 (74%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADVSLPVV+ FV V +AVG ++RGV PDQ+ +++V D+LV +MGG+
Sbjct: 31 LKEVRRALLEADVSLPVVKDFVSEVRGKAVGAEVVRGVSPDQKFIQVVHDQLVDVMGGDN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+QL L
Sbjct: 91 APLARASEAPTVVLMAGLQGAGKTTATAKLGLHLKDQGRRSLMVGADVYRPAAIEQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+GV V++ GT+ KP +IA GL +AK + D ++VDTAGRLQID MM E+ ++
Sbjct: 151 GGQIGVDVFSLGTDAKPEEIAAAGLAKAKAEGYDTLLVDTAGRLQIDTEMMGEMVRIRSA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VSG+PIK
Sbjct: 211 VQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAALSIRKVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMA RILGMGDVL+ VE+AQ+ ++ D E+MQKK+ A+FDF+
Sbjct: 271 FIGTGEKVEALQPFHPERMASRILGMGDVLTLVERAQKEVELADVEKMQKKLQEASFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q R + RMGS+ ++ MIPGM KI +++ E LK +EAMI +MT ER +PEL
Sbjct: 331 DFLQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEDQLKRVEAMIGSMTESERCQPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+R+A SG V +++A +MR M+ +
Sbjct: 391 LASQPSRRRRIATGSGHQPADVDKVLADFQKMRGFMQQM 429
>gi|116072341|ref|ZP_01469608.1| Signal recognition particle protein [Synechococcus sp. BL107]
gi|116064863|gb|EAU70622.1| Signal recognition particle protein [Synechococcus sp. BL107]
Length = 486
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/399 (54%), Positives = 296/399 (74%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADVSLPVV+ FV V +AVG ++RGV PDQ+ +++V D+LV +MGG+
Sbjct: 31 LKEVRRALLEADVSLPVVKDFVSEVRGKAVGAEVVRGVSPDQKFIQVVHDQLVDVMGGDN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A PTV+L+AGLQG GKTT +AKL +LK QG+ ++V DVYRPAAI+QL L
Sbjct: 91 APLARASETPTVVLMAGLQGAGKTTATAKLGLHLKDQGRRSLMVGADVYRPAAIEQLKTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+GV V++ GT+ KP +IA GL +AK + D ++VDTAGRLQID MM E+ ++
Sbjct: 151 GGQIGVDVFSLGTDAKPEEIAAAGLAKAKAEGYDTLLVDTAGRLQIDTEMMGEMVRIRSA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA L F+ ++GITGA+LTKLDGDSRGGAALS+++VSG+PIK
Sbjct: 211 VQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAALSIRKVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A+FDF+
Sbjct: 271 FIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEASFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q R + RMGS+ ++ MIPGM KI +++ E LK +EAMI +MT ER +PEL
Sbjct: 331 DFLQQMRLIKRMGSLGGLMKMIPGMNKIDDGMLKQGEDQLKRVEAMIGSMTESERCQPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
L+ P RR+R+A SG V +++A +MR M+ +
Sbjct: 391 LSSQPSRRRRIAAGSGHQPADVDKVLADFQKMRGFMQQM 429
>gi|33862622|ref|NP_894182.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9313]
gi|33634538|emb|CAE20524.1| signal recognition particle protein (SRP54) [Prochlorococcus
marinus str. MIT 9313]
Length = 497
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/399 (53%), Positives = 303/399 (75%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++ +RRALL ADVSL VVR FV+ V ++AVG ++RGV PDQ+ V++V +LV++MGG+
Sbjct: 31 LKQVRRALLGADVSLEVVREFVEEVRQKAVGAEVVRGVTPDQKFVQVVHQQLVEVMGGDN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ + A+ PTV+L+AGLQG GKTT +AKL +LK QG+ ++VA DVYRPAAIDQL L
Sbjct: 91 APMAEAEDSPTVVLMAGLQGAGKTTATAKLGLHLKDQGQRPLMVAADVYRPAAIDQLRTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+GV V++ G +VKP +IA GL +A+++ D ++VDTAGRLQID MM+E+ ++
Sbjct: 151 GEQIGVDVFSLGDDVKPEEIAAAGLAKAREEGFDTLLVDTAGRLQIDTEMMEEMVRIRSA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+M GQEAA L F+ ++GITG++LTKLDGDSRGGAALS+++VSG+PIK
Sbjct: 211 VEPDEVLLVVDSMIGQEAAELTRAFHDKVGITGSVLTKLDGDSRGGAALSIRKVSGQPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++E L+PF+P+RMA RILGMGDVL+ VEKAQ+ ++ D E+MQKK+ A+FDF+
Sbjct: 271 FIGTGEKVEALQPFHPERMASRILGMGDVLTLVEKAQKEVELADVEKMQKKLQEASFDFS 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q R + RMGS+ +I M+PGM K+ +++ E+ LK +EAMI +MT +ER +PEL
Sbjct: 331 DFLQQMRLIKRMGSLGGLIKMMPGMNKLDDGMLKQGEQQLKRIEAMIGSMTADERNQPEL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LA P RR+R+A SG + V +++A +MR M+ +
Sbjct: 391 LASQPSRRRRIAGGSGHSPADVDKVLADFQKMRGFMQQM 429
>gi|124359738|gb|ABN06080.1| GTP-binding signal recognition particle SRP54, G-domain [Medicago
truncatula]
Length = 341
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/233 (90%), Positives = 222/233 (95%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIRRALLEADVSLPVVRRFVQ+V++QAVGVG+ RGV+PDQQLVKIV DELV+LMGGEV
Sbjct: 97 MRDIRRALLEADVSLPVVRRFVQSVTDQAVGVGVTRGVKPDQQLVKIVHDELVQLMGGEV 156
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SEL FAK+ PTVILLAGLQGVGKTTV AKLANY KKQGKSCMLVAGDVYRPAAIDQL IL
Sbjct: 157 SELTFAKTGPTVILLAGLQGVGKTTVCAKLANYFKKQGKSCMLVAGDVYRPAAIDQLTIL 216
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QV VPVYTAGT+VKPS IAKQG EEAKKK +DVVIVDTAGRLQIDKAMMDELKDVKRV
Sbjct: 217 GKQVDVPVYTAGTDVKPSDIAKQGFEEAKKKKIDVVIVDTAGRLQIDKAMMDELKDVKRV 276
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE 233
LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKE
Sbjct: 277 LNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKE 329
>gi|392529142|ref|ZP_10276279.1| signal recognition particle protein [Carnobacterium maltaromaticum
ATCC 35586]
Length = 474
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/416 (50%), Positives = 300/416 (72%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VS++A+G ++ + P QQ+VKIV +EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFVKTVSDRAIGSEVLESLSPAQQIVKIVDEELTALMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S + A PTVI++ GLQG GKTT + KLAN+L KKQ + +LVA D+YRPAAI QL
Sbjct: 92 STIQSAPKSPTVIMMVGLQGAGKTTTAGKLANFLRKKQNRRPLLVAADIYRPAAIQQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+ +PV++ G +V P +IAK G+E+AK++++D VI+DTAGRL ID+ +M EL D+K
Sbjct: 152 LGEQLDIPVFSMGDQVSPVEIAKMGIEKAKEEHLDFVIIDTAGRLHIDETLMTELTDIKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NPTE+ LVVDAMTGQ+A + +FN ++ ITG ILTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 VTNPTEIFLVVDAMTGQDAVNVAESFNEQLDITGVILTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G+GE++EDLEPFYPDRMA RILGMGD+L+ +EKAQ+ ++ AEEM +K+ +FDF
Sbjct: 272 KFTGQGEKLEDLEPFYPDRMASRILGMGDMLTLIEKAQQDFDEKKAEEMTQKMQDNSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPEEREKP 358
NDF++Q + MG + ++ MIPGM + + + K M+A++ +MTP+ERE P
Sbjct: 332 NDFIEQMDQLNNMGPIEDILKMIPGMNNVPGLDKMQIDPKDTARMKAIVLSMTPQERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+LL++S RR+R+A+ SG+ +V++++ Q + K +M M G+ + +
Sbjct: 392 DLLSQS--RRRRIARGSGRPIAEVNRMIKQFNE----SKKMMSQMSKGNFNGMDGM 441
>gi|387219191|gb|AFJ69304.1| signal recognition particle subunit SRP54, partial [Nannochloropsis
gaditana CCMP526]
Length = 604
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/409 (53%), Positives = 292/409 (71%), Gaps = 10/409 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+RD++RALL+ADV+L V ++AV E+A+G+ + +GV PDQ+ VKI+ DELV LMG E
Sbjct: 117 LRDVKRALLDADVNLKVTNALLEAVKEKALGMDVTKGVTPDQEFVKIMYDELVDLMGAEQ 176
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSC------MLVAGDVYRPAAI 114
+EL A PTVILLAGLQG GKTT +AKLA Y + + + ++VA DVYRPAAI
Sbjct: 177 AELAQASKPPTVILLAGLQGAGKTTAAAKLALYCQSRAEKAEAFEKILMVAADVYRPAAI 236
Query: 115 DQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDEL 174
DQL LGE++ V V++ GT+ P IA++ LE+AK + VIVDTAGR ID+ +M E+
Sbjct: 237 DQLRTLGERIDVEVFSMGTDEDPIVIARKALEKAKAQGFTTVIVDTAGRQVIDEKLMKEI 296
Query: 175 KDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEV 234
K VK + P EVLLVVDAMTGQEAA + FN EIG+TGAILTKLDGD+RGGAALSV+ V
Sbjct: 297 KGVKTAVKPDEVLLVVDAMTGQEAATVTARFNDEIGLTGAILTKLDGDTRGGAALSVRGV 356
Query: 235 SGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMS 294
SGKPIK +G GE +E LEPFYPDRMA RILGMGDV+S VEKAQ+ + Q+DA + KK+M+
Sbjct: 357 SGKPIKFIGVGETLEKLEPFYPDRMASRILGMGDVVSLVEKAQDEINQDDAMAIFKKMMT 416
Query: 295 ANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPE 353
FDF+DF+ QTR +++MGS+S ++ MIPGM + P + E EK L + MI M PE
Sbjct: 417 GTFDFDDFMTQTRMISKMGSLSGMMKMIPGMAGVLPGDAMYEGEKKLFAYQEMINVMEPE 476
Query: 354 EREKPELLAESP---VRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
ER+ P++L ++P +R KR+ ++SG++ ++ + +R+ M +
Sbjct: 477 ERKDPKMLLDNPGADLRWKRIVEESGRSMEEAKNFQREFSNLRLMMTRM 525
>gi|414083599|ref|YP_006992307.1| signal recognition particle protein [Carnobacterium maltaromaticum
LMA28]
gi|412997183|emb|CCO10992.1| signal recognition particle protein [Carnobacterium maltaromaticum
LMA28]
Length = 494
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/416 (50%), Positives = 300/416 (72%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VS++A+G ++ + P QQ+VKIV +EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFVKTVSDRAIGSEVLESLSPAQQIVKIVDEELTALMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S + A PTVI++ GLQG GKTT + KLAN+L KKQ + +LVA D+YRPAAI QL
Sbjct: 92 STIQSAPKSPTVIMMVGLQGAGKTTTAGKLANFLRKKQNRRPLLVAADIYRPAAIQQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+ +PV++ G +V P +IAK G+E+AK++++D VI+DTAGRL ID+ +M EL D+K
Sbjct: 152 LGEQLDIPVFSMGDQVSPVEIAKMGIEKAKEEHLDFVIIDTAGRLHIDETLMTELTDIKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NPTE+ LVVDAMTGQ+A + +FN ++ ITG ILTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 VTNPTEIFLVVDAMTGQDAVNVAESFNEQLDITGVILTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G+GE++EDLEPFYPDRMA RILGMGD+L+ +EKAQ+ ++ AEEM +K+ +FDF
Sbjct: 272 KFTGQGEKLEDLEPFYPDRMASRILGMGDMLTLIEKAQQDFDEKKAEEMTQKMQDNSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPEEREKP 358
NDF++Q + MG + ++ MIPGM + + + K M+A++ +MTP+ERE P
Sbjct: 332 NDFIEQMDQLNNMGPIEDILKMIPGMNNVPGLDKMQIDPKDTARMKAIVLSMTPQERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+LL++S RR+R+A+ SG+ +V++++ Q + K +M M G+ + +
Sbjct: 392 DLLSQS--RRRRIARGSGRPIAEVNRMIKQFNE----SKKMMSQMSKGNFNGMDGM 441
>gi|78042676|ref|YP_360266.1| signal recognition particle protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77994791|gb|ABB13690.1| signal recognition particle protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 446
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/402 (53%), Positives = 292/402 (72%), Gaps = 3/402 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VV+ F+ V E+AVG ++ + P QQ++KIV +EL+ LMG
Sbjct: 32 LREVRIALLEADVNFQVVKDFIAKVKEKAVGHEVLESLTPGQQVIKIVHEELINLMGKTN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L A S PT+I+L GLQG GKTT +AKLA LKKQGK +LVA DVYRPAAI QL +L
Sbjct: 92 AKLNDAGSPPTIIMLVGLQGAGKTTTAAKLAYLLKKQGKKPLLVAADVYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+ + VPV+T G E P IAK + AK + VI+DTAGRL I++ +MDELK +K V
Sbjct: 152 GDTIDVPVFTMG-EQSPVDIAKASINFAKSNLKNYVIIDTAGRLHINEELMDELKKIKDV 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P E+LLVVDAMTGQ+A + +FN E+G+TG ILTKLDGD++GGAALSVK V+G PIK
Sbjct: 211 VHPHEILLVVDAMTGQDAVNVAKSFNDELGLTGVILTKLDGDTKGGAALSVKAVTGCPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++E+LEPFYPDRMA RILGMGDVL+ +EKA+E + E A++MQ+K+ S FD
Sbjct: 271 FAGMGEKIENLEPFYPDRMASRILGMGDVLTLIEKAKEALDAEKAQKMQEKLKSREFDLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL + + +MG + +++GMIPGMGK+ EK LK +EA+I +MTPEER KPE+
Sbjct: 331 DFLDSMQQIKKMGPLEQLLGMIPGMGKVKDIAGMVDEKELKHIEAIIYSMTPEERRKPEI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+ S R+KR+A+ SG + Q+V++L+ Q QM+ MK G+
Sbjct: 391 IDGS--RKKRIAKGSGTSIQEVNRLLKQFEQMKKLMKQFGGM 430
>gi|13123461|gb|AAK12834.1|AF238499_1 chloroplast SRP54 precursor [Chlamydomonas reinhardtii]
Length = 549
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/457 (49%), Positives = 322/457 (70%), Gaps = 15/457 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALLEADVSLPVVRRF++ V E+A+G ++ GV PD Q +K V +EL+ LMGG
Sbjct: 96 LKEVRRALLEADVSLPVVRRFIKKVEERALGTKVLEGVTPDVQFIKTVSNELIDLMGGGN 155
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++++ +IL+AGLQGVG+ + KLA YL+ + +L+ DVY AA QL
Sbjct: 156 RGKTWSRASRKIILMAGLQGVGRH-CAGKLALYLRARE---LLLLHDVY--AAHRQLSA- 208
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G + VPV+ GT+V P +IAK+G+EEA++ VD VI+DTAGRLQ+D+ MM EL+DVK
Sbjct: 209 GAAIDVPVFEDGTDVSPVRIAKKGVEEARRLGVDAVIIDTAGRLQVDEGMMAELRDVKSA 268
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P++ LLVVDAMTGQEAA LV +FN + I+GAILTK+DGDSRGGAALSV+EVSGKPIK
Sbjct: 269 VRPSDTLLVVDAMTGQEAANLVRSFNEAVDISGAILTKMDGDSRGGAALSVREVSGKPIK 328
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+ME LEPFYP+RMA RILGMGDVL+ EKA+ +++EDA++ +++M FDFN
Sbjct: 329 FVGVGEKMEALEPFYPERMASRILGMGDVLTLYEKAEAAIKEEDAQKTMERLMEEKFDFN 388
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + MG + +++ M+PG KI+ + EAEK + EA+I AM EER PE+
Sbjct: 389 DFLNQWKAMNNMGGL-QMLKMMPGFNKISEKHLYEAEKQFGVYEAIIGAMDEEERSNPEV 447
Query: 361 LAES-PVRRKRVAQDSGKTEQQVSQLVAQLFQMRVR---MKNLMGVMEGGSLPALSN--L 414
L ++ +RR+RVAQDSGK+E +V++L+A M+ + M L+ + + G+ P +N L
Sbjct: 448 LIKNLALRRRRVAQDSGKSEAEVTKLMAAYTSMKAQVGGMSKLLKLQKAGADPQKANSLL 507
Query: 415 EDALKSE-QKAPPGTARRKRRSESRRQFVDPASTRPS 450
++ + S +K PG RRK+ ++ Q ++ RP+
Sbjct: 508 QELVASAGKKVAPGKVRRKKEKDALSQGSRASAHRPN 544
>gi|403667650|ref|ZP_10932950.1| signal recognition particle-like (SRP) component [Kurthia sp. JC8E]
Length = 453
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/404 (51%), Positives = 299/404 (74%), Gaps = 4/404 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R AL+EADV+L V+++FV++VSE+AVG +++ + P QQ++KIV+DEL LMGGE
Sbjct: 32 MREVRFALIEADVNLKVIKKFVKSVSERAVGSDVMQSLTPGQQIIKIVQDELTNLMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S + F+ PTVI++ GLQG GKTT + KLAN L KK K +LVA DVYRPAA+ QL
Sbjct: 92 SPVKFSTRPPTVIMMVGLQGAGKTTTTGKLANVLRKKYNKKPLLVAADVYRPAAVKQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG Q+ +PV+ GT+V P +IA++ +E AK+++ DVVI+DTAGRL ID+ +M ELKD++
Sbjct: 152 LGNQLSIPVFEKGTDVSPVEIAREAIEFAKEEHHDVVIIDTAGRLHIDETLMQELKDIRA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P EV LVVDAMTGQ+A + +FN +GITG +LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IKEPDEVFLVVDAMTGQDAVNVAESFNEAVGITGVVLTKLDGDTRGGAALSIRSVTEKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ LEPF+P+RMA RILGMGDVL+ +EKAQ + QE A+E+++K + +F F
Sbjct: 272 KFVGMGEKMDALEPFHPERMAQRILGMGDVLTLIEKAQATVDQEKAKELEEKFKTQSFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q V +MG + +I MIPGM K+ ++ +K + +EA+I++MT ER P
Sbjct: 332 DDFLDQMSQVKKMGPLEDIIKMIPGMNKMKGLDKMNFDDKQINHIEAIIQSMTVAERTNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
E++ S RRKR+++ SG++ Q+V++L+ Q +M+ MK + G+
Sbjct: 392 EIINAS--RRKRISKGSGRSVQEVNRLIKQFDEMKKMMKQMTGL 433
>gi|374296102|ref|YP_005046293.1| signal recognition particle protein [Clostridium clariflavum DSM
19732]
gi|359825596|gb|AEV68369.1| signal recognition particle protein [Clostridium clariflavum DSM
19732]
Length = 450
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/399 (52%), Positives = 288/399 (72%), Gaps = 4/399 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+I+ ALLEADV+ VV+ F+ VSE+AVG ++ + P QQ++KIV +EL+ LMG
Sbjct: 32 MREIKLALLEADVNFKVVKDFIAKVSERAVGQDVLESLTPGQQVIKIVHEELINLMGPGQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+LVFA PTV ++ GLQG GKTT S KLAN L+KQGK +LVA DVYRPAAI QL ++
Sbjct: 92 SKLVFAPKPPTVYMMVGLQGSGKTTTSGKLANLLRKQGKKPLLVACDVYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+GV V++ G + P IAK +E AK K D+VI+DTAGRL ID+A+MDELK++K
Sbjct: 152 GGQLGVDVFSMGDKTNPIDIAKAAIEHAKSKQYDLVIIDTAGRLHIDEALMDELKNIKES 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ PTE+LLVVD+MTGQ+A + TFN ++GI G ILTKLDGD+RGGAALSVK V+GKPIK
Sbjct: 212 VRPTEILLVVDSMTGQDAVNVSETFNEKLGIDGVILTKLDGDTRGGAALSVKTVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ DLEPF+PDRMA RILGMGDVLS +EKAQE ++ A E+++K+ + F
Sbjct: 272 FIGMGEKLNDLEPFFPDRMASRILGMGDVLSLIEKAQEAFDEKKALELERKMRTQQFTLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+Q + + +MG +++++GMIPG+ + ++EK L EA+I++MT +ER P
Sbjct: 332 DFLEQMQQIKKMGPLNKILGMIPGINAEALNAINTADSEKELARFEAIIKSMTKQERNDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
++ S RRKR+A SG Q V++++ +M+ MK
Sbjct: 392 SIINGS--RRKRIAAGSGTKVQDVNKVLKSFEEMKKMMK 428
>gi|335040129|ref|ZP_08533265.1| signal recognition particle protein [Caldalkalibacillus thermarum
TA2.A1]
gi|334179954|gb|EGL82583.1| signal recognition particle protein [Caldalkalibacillus thermarum
TA2.A1]
Length = 449
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/400 (52%), Positives = 294/400 (73%), Gaps = 3/400 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VVR FV V E+AVG +++ + P QQ++K+V +EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVRDFVNRVKERAVGQEVLKSLTPGQQVIKVVNEELTALMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L ++ PTVI++ GLQG GKTT + KLA YL+KQ ++ +LVA D+YRPAAI QL +L
Sbjct: 92 AKLAVSQRPPTVIMMVGLQGAGKTTTTGKLAKYLQKQNRNPLLVAADIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV++ G + P IAK+ +E+AK+++ D V++DTAGRL ID+ +M+EL +K
Sbjct: 152 GEQINVPVFSLGDKESPVVIAKKAIEQAKEQHNDYVLIDTAGRLHIDETLMNELNQIKEE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +FN ++ ITG ILTKLDGD+RGGAALSVK V+G+PIK
Sbjct: 212 VRPDEILLVVDAMTGQDAVNVAQSFNEQLNITGVILTKLDGDTRGGAALSVKAVTGQPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ + QE A+E+++KI F F+
Sbjct: 272 FVGMGEKLDALEPFHPDRMASRILGMGDVLTLIEKAQREVDQEKAKELERKIRKMEFTFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V MG + ++ M+PG GK+ + ++ EK LK +EA+I +MT EE++ PE
Sbjct: 332 DFLEQLEQVRNMGPLDELLSMLPGAGKMKGLKDLKVDEKKLKQVEAIIRSMTKEEKQNPE 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ S RRKR+AQ SG + Q V++L+ Q M+ MK +
Sbjct: 392 IINAS--RRKRIAQGSGTSVQDVNRLLKQFQDMKKMMKQM 429
>gi|326791391|ref|YP_004309212.1| signal recognition particle protein [Clostridium lentocellum DSM
5427]
gi|326542155|gb|ADZ84014.1| signal recognition particle protein [Clostridium lentocellum DSM
5427]
Length = 446
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/405 (51%), Positives = 297/405 (73%), Gaps = 4/405 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ ALLEADV+ VV++F++ + E+AVG ++ + P QQ++KIV +EL+ LMG
Sbjct: 32 LREVKLALLEADVNFKVVKQFIKTIEERAVGHEVMESLTPGQQVIKIVNEELINLMGSTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ FA TVI++ GLQG GKTT SAKL++++K QGK +LVA DVYRPAAIDQL +
Sbjct: 92 SKINFAPRGITVIMMVGLQGAGKTTTSAKLSSHIKSQGKRPLLVACDVYRPAAIDQLTKV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QV VPV++ G++ P IA+ G+ AK+ N+DVVI+DTAGRL ID+ +MDELK++K +
Sbjct: 152 GKQVNVPVFSMGSDKNPVDIAQAGVNYAKENNLDVVIIDTAGRLHIDEVLMDELKNIKAL 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +F+ +G+ G ++TKLDGDSRGGAALSVK V+ KPIK
Sbjct: 212 VKPQEILLVVDAMTGQDAVNVAESFDQTLGLDGVVMTKLDGDSRGGAALSVKAVTNKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++ DLEPF+P+R+A RILGMGDVL+ +EKAQ+ + ++ A+E++ K A F+F
Sbjct: 272 FVGMGEKLNDLEPFHPERIASRILGMGDVLTLIEKAQQNIDEKKAKELEAKFRKAEFNFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+Q + + MG +S+++GMIPGM K+ Q + EK + +EA+I +MT ER P
Sbjct: 332 DFLEQMQQIKNMGPISQLLGMIPGMNAAKLNEIQGQVDEKQMAHIEAIILSMTKAERLNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 403
LL S R+KR+AQ SG+ Q+V++L+ Q QM+ MK G M
Sbjct: 392 SLLNMS--RKKRIAQGSGRDLQEVNRLIKQFEQMQGMMKQFSGAM 434
>gi|37522208|ref|NP_925585.1| signal recognition particle protein SRP54 [Gloeobacter violaceus
PCC 7421]
gi|35213208|dbj|BAC90580.1| signal recognition particle protein SRP54 [Gloeobacter violaceus
PCC 7421]
Length = 497
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/388 (55%), Positives = 281/388 (72%), Gaps = 4/388 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV+ V + FV V + A+G ++ GV PDQQ +KIV D+LV LMG +
Sbjct: 31 LREVRRALLEADVNFQVAKEFVADVRDDALGAEVVSGVTPDQQFIKIVHDQLVALMGEQN 90
Query: 61 SELV--FAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLV 118
L AK RP V+L+AGLQG GKTT SAKLA YL+K G+ +L A DVYRPAAIDQL
Sbjct: 91 VPLAEPRAKGRPAVVLMAGLQGTGKTTASAKLALYLQKNGQKPLLAAADVYRPAAIDQLQ 150
Query: 119 ILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVK 178
LG Q+ VPV+T G E P IA+ LE A DV+IVDTAGRL ID AMM EL+ +K
Sbjct: 151 TLGGQIQVPVFTLGKEADPVDIARASLERAIADRHDVLIVDTAGRLSIDDAMMAELERIK 210
Query: 179 RVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKP 238
++P E+LLVVDAMTGQEAA L F+ +GITGAILTKLDGD+RGGAALSV+++SG+P
Sbjct: 211 AAIDPEEILLVVDAMTGQEAANLTRAFHDRLGITGAILTKLDGDTRGGAALSVRKISGQP 270
Query: 239 IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 298
IK VG GE++E L+PFYP+RMA RILGMGDVL+ VEKAQE + DA +M++++++ FD
Sbjct: 271 IKFVGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDFADAAKMEQQLLTGQFD 330
Query: 299 FNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
F F+KQ R + MG + V+ MIPGM KI+ Q+R+ E LK EAMI +MT +ER P
Sbjct: 331 FESFIKQMRMIKNMGPLGGVLKMIPGMNKISDDQIRQGEVQLKKAEAMIGSMTTQERRNP 390
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLV 386
+L+ S R++R+++ SG + + V +L+
Sbjct: 391 DLINLS--RKRRISKGSGVSLEDVGKLL 416
>gi|328957317|ref|YP_004374703.1| signal recognition particle-like (SRP) GTPase [Carnobacterium sp.
17-4]
gi|328673641|gb|AEB29687.1| signal recognition particle-like (SRP) GTPase [Carnobacterium sp.
17-4]
Length = 475
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/416 (49%), Positives = 300/416 (72%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VS +AVG ++ + P QQ++KIV +EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKTVSARAVGSEVLDSLSPGQQVIKIVNEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA+YL+K Q K +L+A D+YRPAAI QL
Sbjct: 92 ATIQTSPKAPTVVMMVGLQGAGKTTTAGKLASYLRKNQNKRPLLIAADIYRPAAIQQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV++ G +V P +IA+QG+E+AK +++D V++DTAGRLQID+ +M EL D+K
Sbjct: 152 IGKQLDVPVFSMGDQVSPVEIARQGIEKAKAEHLDFVLIDTAGRLQIDETLMQELSDIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
PTE+ LVVDAMTGQEAA + ++FN ++ ITG ILTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 TSQPTEIFLVVDAMTGQEAANVASSFNEQLDITGVILTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPFYP+RMA RILGMGD+L+ +EKAQE ++ +EEM K+ +FDF
Sbjct: 272 KFTGSGEKLDALEPFYPERMANRILGMGDMLTLIEKAQEDFDEKKSEEMMTKLRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPEEREKP 358
NDF++Q V+ MG M ++ MIPGM + + + K M+A++ +MTP+ERE P
Sbjct: 332 NDFIEQMDQVSNMGPMEDILKMIPGMSNVPGLDKLQIDPKDTARMKAIVLSMTPQERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+LL++S RR+R+A+ S + +V++L+ Q + K +M M G++ + NL
Sbjct: 392 DLLSQS--RRRRIARGSARPIAEVNRLIKQFNE----SKKMMSQMSKGNMNGMENL 441
>gi|399047100|ref|ZP_10739232.1| signal recognition particle protein [Brevibacillus sp. CF112]
gi|398054933|gb|EJL47031.1| signal recognition particle protein [Brevibacillus sp. CF112]
Length = 471
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/402 (51%), Positives = 287/402 (71%), Gaps = 3/402 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+AVG +++ + P Q ++KIV +ELV LMGG V
Sbjct: 32 MREVRLALLEADVNFKVVKDFVARVKERAVGQEVMKSLTPGQMVIKIVNEELVALMGGSV 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L A PTVI++AGLQG GKTT + KLA YL+KQ K +LVA D+YRPAAI QL +L
Sbjct: 92 AQLTMAHRPPTVIMMAGLQGAGKTTTTGKLAKYLQKQNKKPLLVAADIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV+T G +V P IA+Q +E AK ++DVVI+DTAGRL ID+A+MDELK ++ V
Sbjct: 152 GEQLNVPVFTLGDQVSPVDIARQAIEHAKANHLDVVILDTAGRLHIDEALMDELKQIREV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+GKPIK
Sbjct: 212 AKPDEILLVVDAMTGQDAVNVAESFNSQLELTGVVLTKLDGDTRGGAALSVKAVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ LEPF+PDRMA RILGMGDVLS +EKAQ + +E A +M++++ F F+
Sbjct: 272 FAAMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQASVDEEKARDMERQMRQGEFTFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
FL + + +G ++GM+PGM K+ ++ EK + +EA+ ++MT ER P+L
Sbjct: 332 MFLDSMQQLRNLGPFEDILGMLPGMNKMK-GKMNVDEKQIARVEAIAKSMTKAERANPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
L S RRKR+A SG + Q+V++ + Q +M+ MK GV
Sbjct: 391 LNAS--RRKRIASGSGTSIQEVNRFIKQFEEMKKMMKQFTGV 430
>gi|433546093|ref|ZP_20502431.1| hypothetical protein D478_20514 [Brevibacillus agri BAB-2500]
gi|432182709|gb|ELK40272.1| hypothetical protein D478_20514 [Brevibacillus agri BAB-2500]
Length = 471
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/402 (51%), Positives = 287/402 (71%), Gaps = 3/402 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+AVG +++ + P Q ++KIV +ELV LMGG V
Sbjct: 32 MREVRLALLEADVNFKVVKDFVARVKERAVGQEVMKSLTPGQMVIKIVNEELVALMGGSV 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L A PTVI++AGLQG GKTT + KLA YL+KQ K +LVA D+YRPAAI QL +L
Sbjct: 92 AQLTMAHRPPTVIMMAGLQGAGKTTTTGKLAKYLQKQNKKPLLVAADIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV+T G +V P IA+Q +E AK ++DVVI+DTAGRL ID+A+MDELK ++ V
Sbjct: 152 GEQLNVPVFTLGDQVSPVDIARQAIEHAKANHLDVVILDTAGRLHIDEALMDELKQIREV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+GKPIK
Sbjct: 212 AKPDEILLVVDAMTGQDAVNVAESFNSQLELTGVVLTKLDGDTRGGAALSVKAVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ LEPF+PDRMA RILGMGDVLS +EKAQ + +E A +M++++ F F+
Sbjct: 272 FAAMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQASVDEEKARDMERQMRQGEFTFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
FL + + +G ++GM+PGM K+ ++ EK + +EA+ ++MT ER P+L
Sbjct: 332 MFLDSMQQLRNLGPFEDILGMLPGMNKMK-GKMNVDEKQIARVEAIAKSMTKAERANPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
L S RRKR+A SG + Q+V++ + Q +M+ MK GV
Sbjct: 391 LNAS--RRKRIASGSGTSIQEVNRFIKQFEEMKKMMKQFSGV 430
>gi|294783942|ref|ZP_06749264.1| signal recognition particle protein [Fusobacterium sp. 1_1_41FAA]
gi|294479754|gb|EFG27533.1| signal recognition particle protein [Fusobacterium sp. 1_1_41FAA]
Length = 444
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/417 (50%), Positives = 296/417 (70%), Gaps = 12/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +IRGV P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNRISEKAIGTEVIRGVNPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK++KR
Sbjct: 151 GQQIGVDVYSEEDNKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMNELKELKRA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTIEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGSLP 409
L S R+ R+A+ SG V++L+ Q QM+ MK NL G+ +GG P
Sbjct: 389 LKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNLGGMGKGGKFP 443
>gi|373497899|ref|ZP_09588415.1| signal recognition particle protein [Fusobacterium sp. 12_1B]
gi|404367833|ref|ZP_10973195.1| signal recognition particle protein [Fusobacterium ulcerans ATCC
49185]
gi|371962421|gb|EHO80022.1| signal recognition particle protein [Fusobacterium sp. 12_1B]
gi|404288644|gb|EFS25760.2| signal recognition particle protein [Fusobacterium ulcerans ATCC
49185]
Length = 446
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/409 (50%), Positives = 292/409 (71%), Gaps = 8/409 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++R +LLEADV+ VV+ F + E++VG +++G+ P QQ +K+V DELV+L+GG
Sbjct: 31 LKEVRMSLLEADVNYKVVKDFTNKILEKSVGTDVLKGINPGQQFIKVVNDELVELLGGTN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L PTV++L+GLQG GKTT +AKLANYLKKQG+S ++V DVYRPAAI QL +L
Sbjct: 91 SRLTKGVRNPTVLMLSGLQGAGKTTFAAKLANYLKKQGESVLMVGADVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQV VPVY I + GL +AK+ N +I+DTAGRL ID+ +MDEL+++K+
Sbjct: 151 GEQVDVPVYAEEDNKDAVAICEHGLAKAKELNSTYMIIDTAGRLHIDEKLMDELRNIKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + I G +LTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 VRPQEILLVVDAMIGQDAVNLAESFNNVLSIDGIVLTKLDGDTRGGAALSIKSVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GER++D+E F+P+R+ RILGMGDV+S VEKAQ + +EDA+ +++KI + FD N
Sbjct: 271 FVGVGERIDDIELFHPERLVSRILGMGDVVSLVEKAQSAIDEEDAKSLEEKIRTQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ + + ++GS+ ++ MIPGMG++ + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQNIKKLGSLGSILKMIPGMGQV--GDLAPAEKEMKKVEAIIQSMTKEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 409
L + R+KR+A SG +++L+ Q Q MK +M + GG +P
Sbjct: 389 LKAN--RKKRIALGSGTEVADINRLLKQFEQ----MKGMMKMFSGGKMP 431
>gi|304384767|ref|ZP_07367113.1| signal recognition particle protein [Pediococcus acidilactici DSM
20284]
gi|304328961|gb|EFL96181.1| signal recognition particle protein [Pediococcus acidilactici DSM
20284]
Length = 487
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/412 (51%), Positives = 289/412 (70%), Gaps = 10/412 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV++FV+ V EQA+G ++ G+ P QQ+VK+V DELVK+MG E
Sbjct: 42 MREIRLALLEADVNFTVVKKFVKTVREQALGSDILEGLNPAQQIVKLVNDELVKMMGTEA 101
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
S L A PTVI++AGLQG GKTT + KLA LK + K+ +L+A DVYRPAAIDQLV
Sbjct: 102 SPLNQAPKIPTVIMMAGLQGAGKTTTTGKLALKLKNEKKARPLLIAADVYRPAAIDQLVQ 161
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+ VPVY GT+V P +I + GLE+A + D V +DTAGRLQID+ +M EL D+K
Sbjct: 162 VGEQIDVPVYQEGTDVSPVEIVRHGLEQAAENKNDYVFIDTAGRLQIDEKLMQELADIKD 221
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LLVVDAMTGQ A FN ++ +TG ILTKLDGD+RGGAALS++ V+GKPI
Sbjct: 222 LAHPDEILLVVDAMTGQNAVNTAEGFNDKLDVTGVILTKLDGDTRGGAALSIRAVTGKPI 281
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+MEDL+ F+PDRMA RILGMGD+L+ +EK Q+ ++ A EM +KI FDF
Sbjct: 282 KFVGQGEKMEDLDVFHPDRMASRILGMGDMLTLIEKTQKEFDEKQAAEMSQKIRENTFDF 341
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q V MG + ++ MIPGM PA + K ++ +A++ +MT +ERE
Sbjct: 342 NDFLDQMNQVQSMGPIEDIVKMIPGMAN-NPALKNINVDPKDIEHTKAIVYSMTKQEREN 400
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL----MGVMEG 405
P++L +P RR+R+A SG+ +V++++ Q QM+ M + G MEG
Sbjct: 401 PDIL--NPSRRRRIAAGSGRPVVEVNRMIKQFNQMKKMMNQMSKGNFGPMEG 450
>gi|270290355|ref|ZP_06196580.1| signal recognition particle protein [Pediococcus acidilactici 7_4]
gi|418069039|ref|ZP_12706319.1| signal recognition particle protein [Pediococcus acidilactici
MA18/5M]
gi|427441885|ref|ZP_18925463.1| signal recognition particle protein [Pediococcus lolii NGRI 0510Q]
gi|270281136|gb|EFA26969.1| signal recognition particle protein [Pediococcus acidilactici 7_4]
gi|357537772|gb|EHJ21795.1| signal recognition particle protein [Pediococcus acidilactici
MA18/5M]
gi|425786911|dbj|GAC46251.1| signal recognition particle protein [Pediococcus lolii NGRI 0510Q]
Length = 477
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/412 (51%), Positives = 289/412 (70%), Gaps = 10/412 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV++FV+ V EQA+G ++ G+ P QQ+VK+V DELVK+MG E
Sbjct: 32 MREIRLALLEADVNFTVVKKFVKTVREQALGSDILEGLNPAQQIVKLVNDELVKMMGTEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
S L A PTVI++AGLQG GKTT + KLA LK + K+ +L+A DVYRPAAIDQLV
Sbjct: 92 SPLNQAPKIPTVIMMAGLQGAGKTTTTGKLALKLKNEKKARPLLIAADVYRPAAIDQLVQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+ VPVY GT+V P +I + GLE+A + D V +DTAGRLQID+ +M EL D+K
Sbjct: 152 VGEQIDVPVYQEGTDVSPVEIVRHGLEQAAENKNDYVFIDTAGRLQIDEKLMQELADIKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LLVVDAMTGQ A FN ++ +TG ILTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAHPDEILLVVDAMTGQNAVNTAEGFNDKLDVTGVILTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+MEDL+ F+PDRMA RILGMGD+L+ +EK Q+ ++ A EM +KI FDF
Sbjct: 272 KFVGQGEKMEDLDVFHPDRMASRILGMGDMLTLIEKTQKEFDEKQAAEMSQKIRENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q V MG + ++ MIPGM PA + K ++ +A++ +MT +ERE
Sbjct: 332 NDFLDQMNQVQSMGPIEDIVKMIPGMAN-NPALKNINVDPKDIEHTKAIVYSMTKQEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL----MGVMEG 405
P++L +P RR+R+A SG+ +V++++ Q QM+ M + G MEG
Sbjct: 391 PDIL--NPSRRRRIAAGSGRPVVEVNRMIKQFNQMKKMMNQMSKGNFGPMEG 440
>gi|262065932|ref|ZP_06025544.1| signal recognition particle protein [Fusobacterium periodonticum
ATCC 33693]
gi|291380412|gb|EFE87930.1| signal recognition particle protein [Fusobacterium periodonticum
ATCC 33693]
Length = 444
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/417 (50%), Positives = 296/417 (70%), Gaps = 12/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +IRGV P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNRISEKAIGTEVIRGVNPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL ID+ +M+ELK++K+
Sbjct: 151 GQQIGVDVYSEEDNKDVVGIATRAIEKAKEINATYMIVDTAGRLHIDETLMNELKELKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTIEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGSLP 409
L S R+ R+A+ SG V++L+ Q QM+ MK NL G+ +GG P
Sbjct: 389 LKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNLGGMGKGGKFP 443
>gi|226313205|ref|YP_002773099.1| signal recognition particle protein fifty-four homolog
[Brevibacillus brevis NBRC 100599]
gi|226096153|dbj|BAH44595.1| signal recognition particle protein fifty-four homolog
[Brevibacillus brevis NBRC 100599]
Length = 470
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/401 (51%), Positives = 289/401 (72%), Gaps = 3/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+AVG +++ + P Q ++KIV +ELV LMGG V
Sbjct: 32 MREVRLALLEADVNFKVVKDFVARVKERAVGQEVMKSLTPGQMVIKIVNEELVALMGGNV 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L A PTVI++AGLQG GKTT + KLA YL+KQ + +LVAGD+YRPAAI QL +L
Sbjct: 92 AQLTMAHRPPTVIMMAGLQGAGKTTTTGKLAKYLQKQNRKPLLVAGDIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV+T G +V P +IA+Q +E AK ++DVV++DTAGRL ID+A+MDELK ++ V
Sbjct: 152 GEQLNVPVFTLGDQVSPVEIARQAIEHAKTNHLDVVLIDTAGRLHIDEALMDELKQIREV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+GKPIK
Sbjct: 212 TKPDEILLVVDAMTGQDAVNVAESFNSQLELTGVVLTKLDGDTRGGAALSVKAVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ LEPF+PDRMA RILGMGDVLS +EKAQ + ++ A +M++++ F F+
Sbjct: 272 FAAMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQASVDEDKARDMERQMRQGEFTFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
FL + + +G ++GM+PGM K+ ++ EK + +EA+ ++MT +ER P+L
Sbjct: 332 MFLDSMQQLRNLGPFEDILGMLPGMNKMK-GKMNVDEKQIARVEAIAKSMTKQERANPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
L S RRKR+A SG + Q+V++ + Q +M+ MK G
Sbjct: 391 LNAS--RRKRIASGSGTSIQEVNRFLKQFEEMKKMMKQFSG 429
>gi|158320496|ref|YP_001513003.1| signal recognition particle protein [Alkaliphilus oremlandii
OhILAs]
gi|158140695|gb|ABW19007.1| signal recognition particle protein [Alkaliphilus oremlandii
OhILAs]
Length = 448
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/399 (51%), Positives = 282/399 (70%), Gaps = 2/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F+ V E+AVG+ ++ + P QQ++KIV +EL +LMG
Sbjct: 32 MREVRLALLEADVNFKVVKDFINKVKERAVGIEVLESLTPGQQVIKIVNEELTELMGTSQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ F+ PT+I+L GLQG GKTT + KLA LKKQGK +L+A D+YRPAAI QL ++
Sbjct: 92 SKINFSSKPPTIIMLVGLQGAGKTTTTGKLAGMLKKQGKRPLLIACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE+VGVPV+T G + P I+K G++ DV+++DTAGRL +D+ +MDELKD+K
Sbjct: 152 GEKVGVPVFTMGDKQSPVDISKAGIDHGMSHGNDVILIDTAGRLHVDEELMDELKDIKND 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + FN ++GI G ILTKLDGD+RGGAALSV+ V+ KPIK
Sbjct: 212 VKPHEILLVVDSMTGQDAVNVAEHFNEKLGIDGVILTKLDGDTRGGAALSVRAVTNKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++DLEPFYPDRMA RILGMGD+LS +EKAQ + A+E++ KI + F F+
Sbjct: 272 FTGLGEKLDDLEPFYPDRMASRILGMGDMLSLIEKAQANFDAKKAKELENKIKTQQFTFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q V +MGS+S+++ MIPGMG + EK L ++A+I++MT ER P +
Sbjct: 332 DFLDQLEQVQKMGSLSQILEMIPGMGGKQLKGMDVDEKELVYVKAIIQSMTKNERHDPSI 391
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S RRKR+A SG + QQV++L+ Q Q R MK
Sbjct: 392 INGS--RRKRIASGSGTSVQQVNKLLKQFEQTRKMMKQF 428
>gi|336400339|ref|ZP_08581118.1| signal recognition particle protein [Fusobacterium sp. 21_1A]
gi|336162527|gb|EGN65491.1| signal recognition particle protein [Fusobacterium sp. 21_1A]
Length = 443
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/416 (50%), Positives = 296/416 (71%), Gaps = 11/416 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +IRGV P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNKISEKAIGTEVIRGVNPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK++K+
Sbjct: 151 GQQIGVDVYSEENNKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMEELKELKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E FYPDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFYPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPGM KI + AEK ++ +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMRKVEAIIQSMTKEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL------MGVM-EGGSLP 409
L S R+ R+A+ SG V++L+ Q QM+ MK MG+M +GG P
Sbjct: 389 LKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPMGLMGKGGKFP 442
>gi|167040350|ref|YP_001663335.1| signal recognition particle protein [Thermoanaerobacter sp. X514]
gi|256750717|ref|ZP_05491602.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914434|ref|ZP_07131750.1| signal recognition particle protein [Thermoanaerobacter sp. X561]
gi|307724330|ref|YP_003904081.1| signal recognition particle protein [Thermoanaerobacter sp. X513]
gi|166854590|gb|ABY92999.1| signal recognition particle protein [Thermoanaerobacter sp. X514]
gi|256750300|gb|EEU63319.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889369|gb|EFK84515.1| signal recognition particle protein [Thermoanaerobacter sp. X561]
gi|307581391|gb|ADN54790.1| signal recognition particle protein [Thermoanaerobacter sp. X513]
Length = 446
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 286/402 (71%), Gaps = 2/402 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+ +V+E+A+G ++ + P QQ++KIV DEL+ LMG
Sbjct: 32 MREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESLTPGQQVIKIVNDELIALMGSTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L P VI++ GLQG GKTT KLAN LKKQGK+ +LVA DV RPAAI QL ++
Sbjct: 92 SRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACDVVRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G V VPV+T G +V P IAK ++ AK N DV+I+DTAGRL +D+ +M+EL ++K+
Sbjct: 152 GANVNVPVFTMGDKVNPVDIAKASIDYAKSHNSDVIIIDTAGRLHVDEELMEELVNIKKA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + ++FN + ITG ILTKLDGD+RGGAALS+K V+ KPIK
Sbjct: 212 VQPDEILLVVDAMTGQDAVNVASSFNARLDITGVILTKLDGDTRGGAALSIKAVTQKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ DLEPFYPDRMA RILGMGDVL+ +EKAQ + ++ A+E+ +K+++ F
Sbjct: 272 YIGTGEKLTDLEPFYPDRMASRILGMGDVLTLIEKAQAAIDEKKAQELGQKLLTKQFTLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q +++ MG + +++ MIPGM K V +EK LK +EA+I++MT EER+ P +
Sbjct: 332 DFLEQLQSLKNMGPLDQLLSMIPGMNKNMLKNVDFSEKDLKRIEAIIQSMTKEERQNPSI 391
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+ S R+KR+A+ SG T QQV+ L+ Q + + MK +
Sbjct: 392 INGS--RKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADI 431
>gi|90961606|ref|YP_535522.1| signal recognition particle protein [Lactobacillus salivarius
UCC118]
gi|90820800|gb|ABD99439.1| Signal recognition particle protein [Lactobacillus salivarius
UCC118]
Length = 482
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/402 (51%), Positives = 288/402 (71%), Gaps = 6/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V +A+G ++ + P QQ+VKIV +ELVK+MG E
Sbjct: 35 MREIRLALLEADVNFKVVKDFVKTVRSRAIGAEVLESLTPAQQIVKIVNEELVKVMGEEA 94
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
+ L + PT+I++ GLQG GKTT ++KLAN LKK+ + ++A DVYRPAAIDQL I
Sbjct: 95 APLNKSAKIPTIIMMVGLQGAGKTTTASKLANKLKKEKNARPFMIAADVYRPAAIDQLKI 154
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+ + VPV++ G +V P +I +QGLEEAK K D VI+DTAGRLQID+ +M EL +K
Sbjct: 155 LGKDIDVPVFSLGVDVDPVEIVRQGLEEAKDKKNDYVIIDTAGRLQIDEKLMQELSSIKE 214
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 215 LAQPDEILLTVDAMTGQNAVEVAKGFNDQLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 274
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+ +K+ NFDF
Sbjct: 275 KFIGQGEKMTDLDVFYPDRMASRILGMGDMLTLIEKAQQEYDQKQAEELAEKMRENNFDF 334
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q V MG M +I MIPGM PA ++ K ++ +A++ +MTP+ERE
Sbjct: 335 NDFLIQMEQVQNMGPMEDIIKMIPGMAN-NPALKNLKVDPKDIEHTKAIVYSMTPQEREN 393
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
P+LL +P RR+R+A SG+ Q+V++++ Q QM+ MK +
Sbjct: 394 PDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMQDMMKKM 433
>gi|385840301|ref|YP_005863625.1| Signal recognition particle protein [Lactobacillus salivarius CECT
5713]
gi|417810407|ref|ZP_12457086.1| signal recognition particle protein [Lactobacillus salivarius
GJ-24]
gi|300214422|gb|ADJ78838.1| Signal recognition particle protein [Lactobacillus salivarius CECT
5713]
gi|335349203|gb|EGM50703.1| signal recognition particle protein [Lactobacillus salivarius
GJ-24]
Length = 479
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/402 (51%), Positives = 288/402 (71%), Gaps = 6/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V +A+G ++ + P QQ+VKIV +ELVK+MG E
Sbjct: 32 MREIRLALLEADVNFKVVKDFVKTVRSRAIGAEVLESLTPAQQIVKIVNEELVKVMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
+ L + PT+I++ GLQG GKTT ++KLAN LKK+ + ++A DVYRPAAIDQL I
Sbjct: 92 APLNKSAKIPTIIMMVGLQGAGKTTTASKLANKLKKEKNARPFMIAADVYRPAAIDQLKI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+ + VPV++ G +V P +I +QGLEEAK K D VI+DTAGRLQID+ +M EL +K
Sbjct: 152 LGKDIDVPVFSLGVDVDPVEIVRQGLEEAKDKKNDYVIIDTAGRLQIDEKLMQELSSIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAQPDEILLTVDAMTGQNAVEVAKGFNDQLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+ +K+ NFDF
Sbjct: 272 KFIGQGEKMTDLDVFYPDRMASRILGMGDMLTLIEKAQQEYDQKQAEELAEKMRENNFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q V MG M +I MIPGM PA ++ K ++ +A++ +MTP+ERE
Sbjct: 332 NDFLIQMEQVQNMGPMEDIIKMIPGMAN-NPALKNLKVDPKDIEHTKAIVYSMTPQEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
P+LL +P RR+R+A SG+ Q+V++++ Q QM+ MK +
Sbjct: 391 PDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMQDMMKKM 430
>gi|340754117|ref|ZP_08690884.1| signal recognition particle protein [Fusobacterium sp. 2_1_31]
gi|358465943|ref|ZP_09175824.1| hypothetical protein HMPREF9093_00284 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|422317421|ref|ZP_16398777.1| signal recognition particle protein [Fusobacterium periodonticum
D10]
gi|229423656|gb|EEO38703.1| signal recognition particle protein [Fusobacterium sp. 2_1_31]
gi|357069550|gb|EHI79447.1| hypothetical protein HMPREF9093_00284 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|404589799|gb|EKA92378.1| signal recognition particle protein [Fusobacterium periodonticum
D10]
Length = 444
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/417 (50%), Positives = 296/417 (70%), Gaps = 12/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +IRGV P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNRISEKAIGTEVIRGVNPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK++K+
Sbjct: 151 GQQIGVDVYSEEDNKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMNELKELKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTIEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGSLP 409
L S R+ R+A+ SG V++L+ Q QM+ MK NL G+ +GG P
Sbjct: 389 LKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNLGGMGKGGKFP 443
>gi|421527575|ref|ZP_15974173.1| signal recognition particle protein [Fusobacterium nucleatum ChDC
F128]
gi|402256254|gb|EJU06738.1| signal recognition particle protein [Fusobacterium nucleatum ChDC
F128]
Length = 444
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/417 (50%), Positives = 296/417 (70%), Gaps = 12/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +IRGV P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNRISEKAIGTEVIRGVNPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK++K+V
Sbjct: 151 GKQIGVDVYSEEDNKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMEELKELKKV 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTKEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL-------MGVM-EGGSLP 409
L S R+ R+A+ SG V++L+ Q QM+ MK MG M +GG P
Sbjct: 389 LKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNMGAMGKGGKFP 443
>gi|260495487|ref|ZP_05815613.1| signal recognition particle protein [Fusobacterium sp. 3_1_33]
gi|260197024|gb|EEW94545.1| signal recognition particle protein [Fusobacterium sp. 3_1_33]
Length = 443
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/416 (50%), Positives = 296/416 (71%), Gaps = 11/416 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +IRGV P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNKISEKAIGTEVIRGVNPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK++K+
Sbjct: 151 GQQIGVDVYSEENSKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMEELKELKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTKEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL------MGVM-EGGSLP 409
L S R+ R+A+ SG V++L+ Q QM+ MK MG+M +GG P
Sbjct: 389 LKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPMGLMGKGGKFP 442
>gi|339448384|ref|ZP_08651940.1| signal recognition particle protein [Lactobacillus fructivorans
KCTC 3543]
Length = 481
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/417 (50%), Positives = 292/417 (70%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VVR+FV+ V E+A G ++ G+ P QQ+VKIV DEL +MG
Sbjct: 32 MREIRLALLEADVNFKVVRQFVKTVQEKAKGADVLEGLNPAQQIVKIVNDELTNMMGKSA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
+ LV + PTVI++ GLQG GKTT + KLA LK + +++A DVYRPAAI+QL
Sbjct: 92 TPLVKSDKIPTVIMMVGLQGAGKTTSAGKLAKKLKTDDHARPLMIAADVYRPAAIEQLEK 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGVPV+ GT+V P QI + GL+EA K N D V++DTAGRLQID+ +MDELK++K+
Sbjct: 152 VGEQVGVPVFQEGTDVDPVQIVQDGLKEADKNNNDYVLIDTAGRLQIDENLMDELKNIKK 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP ++LLVVDAMTGQ A FN + ITG ILTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 VANPNDILLVVDAMTGQNAVDTAVGFNDALDITGVILTKLDGDTRGGAALSIRAVTDKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
VG+GE+++DL+ F+PDRMA RILGMGD+LSF+EK Q+ + A+E+ +KI +FDF
Sbjct: 272 MFVGQGEKLDDLDVFHPDRMASRILGMGDMLSFIEKTQKEYDENQAKELTEKIKENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
+DF+ Q + +MG + ++ MIPGM PA + K L ++A+I +MT EER
Sbjct: 332 DDFIDQLEQIQKMGPIQDLVKMIPGMAN-NPALKNLNVNPKDLDHIKAIIYSMTSEERSN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P++L +P RR+R+A+ S + QQV++L+ Q Q MK +M + G++ LSN+
Sbjct: 391 PDVL--NPSRRRRIARGSAQPIQQVNRLIKQFDQ----MKKMMNKVSNGNMSGLSNM 441
>gi|227890693|ref|ZP_04008498.1| signal recognition particle protein [Lactobacillus salivarius ATCC
11741]
gi|227867631|gb|EEJ75052.1| signal recognition particle protein [Lactobacillus salivarius ATCC
11741]
Length = 482
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/417 (50%), Positives = 293/417 (70%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V +A+G ++ + P QQ+VKIV +ELVK+MG E
Sbjct: 35 MREIRLALLEADVNFKVVKDFVKTVRSRAIGAEVLESLTPAQQIVKIVNEELVKVMGEEA 94
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
+ L + PT+I++ GLQG GKTT ++KLAN LKK+ + ++A DVYRPAAIDQL I
Sbjct: 95 APLNKSAKIPTIIMMVGLQGAGKTTTASKLANKLKKEKNARPFMIAADVYRPAAIDQLKI 154
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+ + VPV++ G +V P +I +QGLEEAK K D VI+DTAGRLQID+ +M EL +K
Sbjct: 155 LGKDIDVPVFSLGVDVDPVEIVRQGLEEAKDKKNDYVIIDTAGRLQIDEKLMQELSSIKE 214
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 215 LAQPDEILLTVDAMTGQNAVEVAKGFNDQLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 274
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+ +K+ NFDF
Sbjct: 275 KFIGQGEKMTDLDVFYPDRMASRILGMGDMLTLIEKAQQEYDQKQAEELAEKMRENNFDF 334
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q V MG M +I MIPGM PA ++ K ++ +A++ +MTP+ERE
Sbjct: 335 NDFLIQMEQVQNMGPMEDIIKMIPGMAN-NPALKNLKVDPKDIEHTKAIVYSMTPQEREN 393
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+LL +P RR+R+A SG+ Q+V++++ Q Q M+++M M G+ + L
Sbjct: 394 PDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQ----MQDMMKKMSNGNFSGMEGL 444
>gi|172057910|ref|YP_001814370.1| signal recognition particle protein [Exiguobacterium sibiricum
255-15]
gi|171990431|gb|ACB61353.1| signal recognition particle protein [Exiguobacterium sibiricum
255-15]
Length = 450
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/407 (51%), Positives = 292/407 (71%), Gaps = 6/407 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++FV V E+AVG ++ + P QQ+VKIV DEL KLMG EV
Sbjct: 32 MREVRLALLEADVNFKVVKQFVNDVKERAVGQDVMTSLTPGQQVVKIVHDELTKLMGSEV 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S L + PTVI++ GLQG GKTT KLAN+L KKQ +S +LVA D+YRPAAI QL
Sbjct: 92 SPLTLSNRPPTVIMMTGLQGAGKTTTVGKLANHLRKKQNRSPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +I L+ AK+ + D+V++DTAGRL ID+ +M EL DVK
Sbjct: 152 LGKQLELPVFSMGDQVSPQEIVTNALDYAKEHHHDIVLIDTAGRLHIDEDLMQELVDVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS+K V+G PI
Sbjct: 212 IAKPNEIFLVVDSMTGQDAVNVAQSFNEKLGVTGVVLTKLDGDTRGGAALSIKAVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ +EPFYP+RMA RILGMGD+L+ +EKA+ M A+E++ K+ A+F F
Sbjct: 272 KFVGLGEKLDAIEPFYPERMASRILGMGDMLTLIEKAESQMDATRAKELEGKMRDASFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTPEERE 356
+DF++Q + V +MG + ++GMIPG GK ++ A EK L +EA+I++MT ER
Sbjct: 332 DDFIEQLQQVKQMGPLDELLGMIPGAGKGKMKGLKNAQIDEKQLVYVEAIIQSMTKRERT 391
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 403
+PE+L S RRKR+A+ SG++ Q+V++L+ Q MR MK G M
Sbjct: 392 EPEILNAS--RRKRIARGSGRSIQEVNRLIKQFEDMRKMMKQFSGQM 436
>gi|417788149|ref|ZP_12435832.1| signal recognition particle, subunit Ffh SRP54 [Lactobacillus
salivarius NIAS840]
gi|334308326|gb|EGL99312.1| signal recognition particle, subunit Ffh SRP54 [Lactobacillus
salivarius NIAS840]
Length = 479
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/402 (51%), Positives = 288/402 (71%), Gaps = 6/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V +A+G ++ + P QQ+VKIV +ELVK+MG E
Sbjct: 32 MREIRLALLEADVNFKVVKDFVKTVRSRAIGAEVLESLTPAQQIVKIVNEELVKVMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
+ L + PT+I++ GLQG GKTT ++KLAN LKK+ + ++A DVYRPAAIDQL I
Sbjct: 92 APLNKSAKIPTIIMMVGLQGAGKTTTASKLANKLKKEKNARPFMIAADVYRPAAIDQLKI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+ + VPV++ G +V P +I +QGLEEAK K D VI+DTAGRLQID+ +M EL +K
Sbjct: 152 LGKDIDVPVFSLGVDVDPVEIVRQGLEEAKDKKNDYVIIDTAGRLQIDEKLMQELSSIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAQPDEILLTVDAMTGQNAVEVAKGFNDQLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+ +K+ NFDF
Sbjct: 272 KFIGQGEKMTDLDVFYPDRMASRILGMGDMLTLIEKAQQEYDQKQAEELAEKMRENNFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q V MG M +I MIPGM PA ++ K ++ +A++ +MTP+ERE
Sbjct: 332 NDFLIQMEQVQNMGPMEDIIKMIPGMAN-NPALKNLKVDPKDIEHTKAIVYSMTPQEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
P+LL +P RR+R+A SG+ Q+V++++ Q QM+ MK +
Sbjct: 391 PDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMQDMMKKM 430
>gi|403234825|ref|ZP_10913411.1| signal recognition particle protein [Bacillus sp. 10403023]
Length = 446
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/407 (50%), Positives = 300/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVSERAVGQEVMKSLTPGQQVIKVVQEELTALMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAIDQL
Sbjct: 92 SKIAVAKRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G ++ P +IAKQ +E+AK+++ D V++DTAGRL ID+ +MDELK VK
Sbjct: 152 LGKQLNMPVFSLGDKISPVEIAKQAIEKAKEEHHDYVLIDTAGRLHIDEELMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +FN +G+TG +LTKLDGD+RGGAALSVK V+ PI
Sbjct: 212 VAQPDEIFLVVDAMTGQDAVNVAQSFNDLLGLTGVVLTKLDGDTRGGAALSVKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ +E F+P+RMA RILGMGDVLS +EKAQ + ++ A+E++KK S +F F
Sbjct: 272 KFVGLGEKLDAIEAFHPERMASRILGMGDVLSLIEKAQASVDEDKAKELEKKFKSMSFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +MG + ++GM+PG K+ + V+ +K + +EA+I +MT ERE+P
Sbjct: 332 DDFLEQLAQVRKMGPLDEILGMLPGANKMKGLKNVQVDDKQIGHVEAIIRSMTKAEREQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
E++ S R+KR+A+ SG+T Q+V++L+ Q M+ MK + + +G
Sbjct: 392 EIINSS--RKKRIAKGSGRTVQEVNRLLKQFEDMKKMMKQMTNMTKG 436
>gi|289764649|ref|ZP_06524027.1| signal recognition particle [Fusobacterium sp. D11]
gi|289716204|gb|EFD80216.1| signal recognition particle [Fusobacterium sp. D11]
Length = 444
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/417 (50%), Positives = 295/417 (70%), Gaps = 12/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +IRGV P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNKISEKAIGTEVIRGVNPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK++K+
Sbjct: 151 GQQIGVDVYSEENSKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMEELKELKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTKEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL-------MGVM-EGGSLP 409
L S R+ R+A+ SG V++L+ Q QM+ MK MG M +GG P
Sbjct: 389 LKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPNMGAMGKGGKFP 443
>gi|407477591|ref|YP_006791468.1| Signal recognition particle protein [Exiguobacterium antarcticum
B7]
gi|407061670|gb|AFS70860.1| Signal recognition particle protein [Exiguobacterium antarcticum
B7]
Length = 450
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/407 (51%), Positives = 293/407 (71%), Gaps = 6/407 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++FV V E+AVG ++ + P QQ+VKIV DEL KLMG EV
Sbjct: 32 MREVRLALLEADVNFKVVKQFVNDVKERAVGQDVMTSLTPGQQVVKIVHDELTKLMGSEV 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S L + PTVI++ GLQG GKTT + KLAN+L KKQ +S +LVA D+YRPAAI QL
Sbjct: 92 SPLTLSNRPPTVIMMTGLQGAGKTTTTGKLANHLRKKQNRSPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +I L+ AK+ + D+V++DTAGRL ID+ +M EL DVK
Sbjct: 152 LGKQLELPVFSMGDQVSPQEIVTGALDYAKEHHHDIVLIDTAGRLHIDEDLMQELVDVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS+K V+G PI
Sbjct: 212 IAKPNEIFLVVDSMTGQDAVNVAESFNEKLGVTGVILTKLDGDTRGGAALSIKAVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ +EPFYP+RMA RILGMGD+L+ +EKA+ M A+E++ K+ A+F F
Sbjct: 272 KFVGLGEKLDAIEPFYPERMASRILGMGDMLTLIEKAEFQMDATRAKELEGKMRDASFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTPEERE 356
+DF++Q + V +MG + ++GMIPG GK ++ A EK L +EA+I++MT ER
Sbjct: 332 DDFIEQLQQVKQMGPLDELLGMIPGAGKGKMKGLKNAQIDEKQLVYVEAIIQSMTKRERT 391
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 403
+PE+L S RRKR+A+ SG++ Q+V++L+ Q MR MK G M
Sbjct: 392 EPEILNAS--RRKRIARGSGRSIQEVNRLIKQFEDMRKMMKQFSGQM 436
>gi|167037689|ref|YP_001665267.1| signal recognition particle protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116104|ref|YP_004186263.1| signal recognition particle protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|326389503|ref|ZP_08211070.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
JW 200]
gi|392940886|ref|ZP_10306530.1| LOW QUALITY PROTEIN: signal recognition particle protein
[Thermoanaerobacter siderophilus SR4]
gi|166856523|gb|ABY94931.1| signal recognition particle protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929195|gb|ADV79880.1| signal recognition particle protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|325994508|gb|EGD52933.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
JW 200]
gi|392292636|gb|EIW01080.1| LOW QUALITY PROTEIN: signal recognition particle protein
[Thermoanaerobacter siderophilus SR4]
Length = 446
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/402 (50%), Positives = 286/402 (71%), Gaps = 2/402 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+ +V+E+A+G ++ + P QQ++KIV DEL+ LMG
Sbjct: 32 MREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESLTPGQQVIKIVNDELIALMGSTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L P VI++ GLQG GKTT KLAN LKKQGK+ +LVA DV RPAAI QL ++
Sbjct: 92 SRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACDVVRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G V VPV+T G +V P IAK ++ A+ N DV+I+DTAGRL ID+ +M+EL ++K+
Sbjct: 152 GANVNVPVFTMGDKVNPVDIAKASIDYARSHNSDVIIIDTAGRLHIDEELMEELVNIKKA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + ++FN + ITG ILTKLDGD+RGGAALS+K V+ KPIK
Sbjct: 212 VQPDEILLVVDAMTGQDAVNVASSFNERLDITGVILTKLDGDTRGGAALSIKAVTQKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++ DLEPFYPDRMA RILGMGDVL+ +EKAQ + ++ A+E+ +K+++ F
Sbjct: 272 YVGTGEKLTDLEPFYPDRMASRILGMGDVLTLIEKAQAAIDEKKAQELGQKLLTKQFTLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q +++ MG + +++ MIPGM K V +EK LK +EA+I++MT EER+ P +
Sbjct: 332 DFLEQLQSLKNMGPLDQLLSMIPGMNKNMLKNVDISEKDLKRIEAIIQSMTKEERQNPSI 391
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+ S R+KR+A+ SG T QQV+ L+ Q + + MK +
Sbjct: 392 INGS--RKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADI 431
>gi|323484786|ref|ZP_08090143.1| hypothetical protein HMPREF9474_01894 [Clostridium symbiosum
WAL-14163]
gi|323691859|ref|ZP_08106113.1| signal recognition particle protein [Clostridium symbiosum
WAL-14673]
gi|355627802|ref|ZP_09049433.1| signal recognition particle protein [Clostridium sp. 7_3_54FAA]
gi|323401892|gb|EGA94233.1| hypothetical protein HMPREF9474_01894 [Clostridium symbiosum
WAL-14163]
gi|323504066|gb|EGB19874.1| signal recognition particle protein [Clostridium symbiosum
WAL-14673]
gi|354820127|gb|EHF04553.1| signal recognition particle protein [Clostridium sp. 7_3_54FAA]
Length = 454
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/400 (52%), Positives = 288/400 (72%), Gaps = 3/400 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++ ALLEADVS VV++F+ +V EQAVG ++ G+ P Q ++KIV DELVKLMG E+
Sbjct: 32 LKEVKMALLEADVSFKVVKQFINSVQEQAVGTDVLNGLHPGQMVIKIVNDELVKLMGSEM 91
Query: 61 SELVFAKSRP-TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ S TVI++AGLQG GKTT +AK+A LK +G++ +L A DVYRPAA++QL
Sbjct: 92 TEIALKPSNEITVIMMAGLQGAGKTTTTAKIAGKLKAKGRNPLLAACDVYRPAAVEQLQK 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
GE+ GVPV++ GT KP IAK +E A K +VVI+DTAGRL ID+ MM+EL ++K
Sbjct: 152 NGEKQGVPVFSMGTGHKPVNIAKAAIEHASKNGHNVVIIDTAGRLHIDEDMMNELVEIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++ + LLVVDAMTGQ+A + FN +IGI G ILTK+DGD+RGGAALS+K V+GKPI
Sbjct: 212 NVDVYQTLLVVDAMTGQDAVNVAGMFNDKIGIDGVILTKMDGDTRGGAALSIKAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
VG GE++ DLE FYPDRMA RILGMGDVLS ++KA VM +E A+E+ KKI A FD+
Sbjct: 272 IYVGMGEKLSDLEQFYPDRMASRILGMGDVLSIIDKAAAVMDEEKAKELSKKIKKAEFDY 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q R + +MG MS ++ M+PGM ++ + EK++ +EA+I +MT EER P+
Sbjct: 332 NDFLDQMRQIKQMGGMSSILTMMPGMNQLKGVDLDGNEKAMDRVEAIILSMTDEERRNPD 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
L+ +P R+KR+A +G +V+++V Q +M+ MK L
Sbjct: 392 LI--NPSRKKRIANGAGVDIAEVNRMVKQFGEMKKMMKQL 429
>gi|295397866|ref|ZP_06807929.1| signal recognition particle protein [Aerococcus viridans ATCC
11563]
gi|294973911|gb|EFG49675.1| signal recognition particle protein [Aerococcus viridans ATCC
11563]
Length = 484
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/416 (50%), Positives = 290/416 (69%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ V+E+A+ +++ + P QQ+VKIV DEL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVNERALNSEVLQSLSPAQQVVKIVNDELTDLMGGEH 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVI 119
++ FA + PTVI++AGLQG GKTT KLA +LKK K +LVAGD+YRPAAI+QL
Sbjct: 92 EDIQFATTPPTVIMMAGLQGAGKTTTVGKLAAFLKKNDHKKPLLVAGDIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PV+T G +V P +IA Q +E AK D+V +DTAGRLQID+ +M ELKD+K
Sbjct: 152 IGQQLDLPVFTLGDQVSPVEIATQAIEYAKMNGHDLVFIDTAGRLQIDERLMTELKDIKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VD+MTGQEAA + F+ E+ ITG +LTKLDGD+RGGAALS+ V+GKPI
Sbjct: 212 AVEPDEILLTVDSMTGQEAANVAKAFDEELDITGVVLTKLDGDTRGGAALSIVSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE++ ++E FYPDRMA RILGMGD+L+ +EKAQ + +AE M K+ +DF
Sbjct: 272 KFTGTGEKLNEIERFYPDRMANRILGMGDMLTLIEKAQAEFDENEAEAMAAKMRENTYDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPEEREKP 358
NDF+K + +MGSM ++ MIPGM K+ + K + +AMI++MTP ERE P
Sbjct: 332 NDFIKNMDQMNKMGSMKDILKMIPGMNKLGNLDDLNIDPKQMAQTKAMIQSMTPYERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+ + +S RR+R+A+ S T Q+V++L+ Q + R LM M G++ AL N+
Sbjct: 392 DSINQS--RRRRIAKGSATTLQEVNRLIKQFNESR----KLMSAMSNGNMGALQNM 441
>gi|19704725|ref|NP_604287.1| Signal recognition particle, subunit FFH/SRP54 [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|296328503|ref|ZP_06871023.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|19715045|gb|AAL95586.1| Signal recognition particle, subunit FFH/SRP54 [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|296154409|gb|EFG95207.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 444
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/411 (50%), Positives = 294/411 (71%), Gaps = 8/411 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +IRGV P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNRISEKAIGTEVIRGVNPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +MDELK++K+
Sbjct: 151 GQQIGVDVYSEEDNKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMDELKELKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTKEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
L S R+ R+A+ SG V++L+ Q Q MK++M + G +P +
Sbjct: 389 LKAS--RKIRIAKGSGTDVSDVNKLLKQFDQ----MKSMMKMFSSGKMPNI 433
>gi|345017770|ref|YP_004820123.1| signal recognition particle protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033113|gb|AEM78839.1| signal recognition particle protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 446
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/402 (50%), Positives = 286/402 (71%), Gaps = 2/402 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+ +V+E+A+G ++ + P QQ++KIV DEL+ LMG
Sbjct: 32 MREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESLTPGQQVIKIVNDELIALMGSTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L P VI++ GLQG GKTT KLAN LKKQGK+ +LVA DV RPAAI QL ++
Sbjct: 92 SRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACDVVRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G V VPV+T G +V P IAK ++ A+ N DV+I+DTAGRL ID+ +M+EL ++K+
Sbjct: 152 GANVNVPVFTMGDKVNPVDIAKASIDYARSHNSDVIIIDTAGRLHIDEELMEELVNIKKA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + ++FN + ITG ILTKLDGD+RGGAALS+K V+ KPIK
Sbjct: 212 VQPDEILLVVDAMTGQDAVNVASSFNERLDITGVILTKLDGDTRGGAALSIKAVTQKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++ DLEPFYPDRMA RILGMGDVL+ +EKAQ + ++ A+E+ +K+++ F
Sbjct: 272 YVGAGEKLTDLEPFYPDRMASRILGMGDVLTLIEKAQAAIDEKKAQELGQKLLTKQFTLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q +++ MG + +++ MIPGM K V +EK LK +EA+I++MT EER+ P +
Sbjct: 332 DFLEQLQSLKNMGPLDQLLSMIPGMNKNMLKNVDISEKDLKRIEAIIQSMTKEERQNPSI 391
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+ S R+KR+A+ SG T QQV+ L+ Q + + MK +
Sbjct: 392 INGS--RKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADI 431
>gi|229918605|ref|YP_002887251.1| signal recognition particle protein [Exiguobacterium sp. AT1b]
gi|229470034|gb|ACQ71806.1| signal recognition particle protein [Exiguobacterium sp. AT1b]
Length = 446
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/407 (50%), Positives = 294/407 (72%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++FV V E+AVG +++ + P QQ+VKIV +EL LMG +V
Sbjct: 32 MREVRLALLEADVNFKVVKQFVNDVKERAVGQDVMKSLTPGQQVVKIVHEELSNLMGSDV 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ F++ PTV+++ GLQG GKTT + KLAN + KK +S +LVA D+YRPAAI QL
Sbjct: 92 VPITFSQKPPTVVMMVGLQGAGKTTTTGKLANLIRKKHNRSPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +VKP +I + LE AK + D V++DTAGRL ID+ +M EL++VK
Sbjct: 152 LGKQLDLPVFSLGDQVKPEEIVTKALEYAKTNHHDFVLIDTAGRLHIDETLMGELENVKT 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+ LVVD+MTGQ+A + +FN ++GITG +LTKLDGD+RGGAALS+K V+G PI
Sbjct: 212 IAKPNEIFLVVDSMTGQDAVNVADSFNEKLGITGVVLTKLDGDTRGGAALSIKAVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ LEPF+P+RMA RILGMGDVLS +EKA+ M Q+ A+E++ KI A+F F
Sbjct: 272 KFVGLGEKLDALEPFHPERMASRILGMGDVLSLIEKAETQMDQDAAKELESKIRDASFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DF++Q V MG + ++ M+PG GK+ + V+ EK L +EA+I +MT ER P
Sbjct: 332 DDFIEQLAQVKNMGPIDELLSMLPGAGKMKGLKNVQIDEKQLDHVEAIIRSMTKHERANP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
E+L S RRKR+A+ SG++ Q+V++L+ Q M+ MK + G M+G
Sbjct: 392 EVLNAS--RRKRIAKGSGRSIQEVNRLIKQFDDMKKMMKQMSGQMKG 436
>gi|422340385|ref|ZP_16421333.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|355369069|gb|EHG16473.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 444
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/417 (50%), Positives = 295/417 (70%), Gaps = 12/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +IRGV P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNKISEKAIGTEVIRGVNPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLEVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK++K+
Sbjct: 151 GQQIGVDVYSEEDNKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMEELKELKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTKEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL-------MGVM-EGGSLP 409
L S R+ R+A+ SG V++L+ Q QM+ MK MG M +GG P
Sbjct: 389 LKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNMGAMGKGGKFP 443
>gi|418961237|ref|ZP_13513124.1| signal recognition particle protein [Lactobacillus salivarius
SMXD51]
gi|380344904|gb|EIA33250.1| signal recognition particle protein [Lactobacillus salivarius
SMXD51]
Length = 479
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/417 (50%), Positives = 293/417 (70%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V +A+G ++ + P QQ+VKIV +ELV++MG E
Sbjct: 32 MREIRLALLEADVNFKVVKDFVKTVRSRAIGAEVLESLTPAQQIVKIVNEELVRVMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
+ L + PT+I++ GLQG GKTT ++KLAN LKK+ + ++A DVYRPAAIDQL I
Sbjct: 92 APLNKSAKIPTIIMMVGLQGAGKTTTASKLANKLKKEKNARPFMIAADVYRPAAIDQLKI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+ + VPV++ G +V P +I +QGLEEAK K D VI+DTAGRLQID+ +M EL +K
Sbjct: 152 LGKDIDVPVFSLGIDVDPVEIVRQGLEEAKDKKNDYVIIDTAGRLQIDEKLMQELSSIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAQPDEILLTVDAMTGQNAVEVAKGFNDQLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+ +K+ NFDF
Sbjct: 272 KFIGQGEKMTDLDVFYPDRMASRILGMGDMLTLIEKAQQEYDQKQAEELAEKMRENNFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q V MG M +I MIPGM PA ++ K ++ +A++ +MTP+ERE
Sbjct: 332 NDFLIQMEQVQNMGPMEDIIKMIPGMAN-NPALKNLKVDPKDIEHTKAIVYSMTPQEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+LL +P RR+R+A SG+ Q+V++++ Q Q M+++M M G+ + L
Sbjct: 391 PDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQ----MQDMMKKMSNGNFSGMEGL 441
>gi|150390508|ref|YP_001320557.1| signal recognition particle protein [Alkaliphilus metalliredigens
QYMF]
gi|149950370|gb|ABR48898.1| signal recognition particle protein [Alkaliphilus metalliredigens
QYMF]
Length = 447
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/399 (52%), Positives = 281/399 (70%), Gaps = 2/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ FV+ V E+A G + + P QQ++KIV +EL +LMG
Sbjct: 32 MREVKLALLEADVNFKVVKDFVKIVKERATGSEVFESLTPGQQVIKIVNEELTELMGTTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ F+ PTVI+L GLQG GKTT S KLA YLKKQGK +LVAGD+YRPAAI QL ++
Sbjct: 92 SKITFSSKPPTVIMLVGLQGAGKTTTSGKLAGYLKKQGKRPLLVAGDIYRPAAIKQLEVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G QV VPV+T G ++ P IAK G+E K DVV++DTAGRL ID +MDELKD+K
Sbjct: 152 GSQVDVPVFTLGDQISPVDIAKAGVEHGIKHGNDVVLIDTAGRLHIDDTLMDELKDIKTT 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + F+ ++G+ G ILTKLDGD+RGGAALSV+ V+ KPIK
Sbjct: 212 VKPQEILLVVDSMTGQDAVNVAEHFDTKLGVDGIILTKLDGDTRGGAALSVRAVTRKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++ DLEPF+PDRMA RILGMGDVLS +EKAQ ++ A+E++ KI + F F
Sbjct: 272 FVGLGEKLNDLEPFHPDRMASRILGMGDVLSLIEKAQVSFDEKKAKELENKIKTQQFTFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q + V MG +S+++ MIPG G + EK L ++A+I++MT ER+ P +
Sbjct: 332 DFLEQLQQVQSMGPISQLLEMIPGAGGKQMKNLEVDEKELVHIQAIIQSMTTGERKTPTI 391
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S RRKR+A+ SG + QV++L+ Q Q + MK
Sbjct: 392 INGS--RRKRIAKGSGTSVAQVNRLIKQFDQTKKMMKQF 428
>gi|269124183|ref|YP_003306760.1| signal recognition particle protein [Streptobacillus moniliformis
DSM 12112]
gi|268315509|gb|ACZ01883.1| signal recognition particle protein [Streptobacillus moniliformis
DSM 12112]
Length = 443
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/414 (48%), Positives = 289/414 (69%), Gaps = 5/414 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VV+ FV+ + E+A G +I+GV P QQ +KI+ DEL++++GG+
Sbjct: 31 LREVRLALLEADVNYSVVKNFVKRIKEKAQGQEVIKGVNPRQQFIKIINDELIEVLGGQN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L + S+PT+I+L GLQG GKTT + KLA +LKK+ L+ DVYRPAA QL++L
Sbjct: 91 TSLNKSTSKPTIIMLVGLQGAGKTTFAGKLAKFLKKEKSKAFLIGADVYRPAAKKQLMVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
Q+GVP ++ +I GL EAKK++ D V++DTAGRL +D+A+M EL+DVK
Sbjct: 151 ANQIGVPFFSIEDSNNVLEIVNNGLLEAKKEDADYVLIDTAGRLHVDEALMQELQDVKSS 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTE+LLVVD MTGQ+A + TFN + ITG ++TKLDGD+RGGAALS+KE+SGKPIK
Sbjct: 211 VNPTEILLVVDGMTGQDAVNVAKTFNDVLDITGVVVTKLDGDTRGGAALSIKEISGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+ GE+++D+ F+P+R+A RILGMGDV+S VEKA+E + +++A EM+ K FDF
Sbjct: 271 YISEGEKLDDIAVFHPERLASRILGMGDVVSLVEKAKEAIDEKEAREMEAKFRKNQFDFE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ + + RMGS+ ++ M+PGMG + + AEK +K +EA+I +MT EER P L
Sbjct: 331 DFLKQFKMIKRMGSLGGILKMLPGMGALGDIDLTGAEKEMKKVEAIIYSMTVEERRNPNL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
L S R+ R+A+ SG QV++L+ Q Q MK +M + G++P +
Sbjct: 391 LKVSS-RKIRIAKGSGTDVTQVNKLLKQFEQ----MKQMMKMFNSGNIPGFGQI 439
>gi|255529983|ref|YP_003090355.1| signal recognition particle protein [Pedobacter heparinus DSM 2366]
gi|255342967|gb|ACU02293.1| signal recognition particle protein [Pedobacter heparinus DSM 2366]
Length = 446
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/399 (52%), Positives = 278/399 (69%), Gaps = 4/399 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++IR+ALL+ADV+ + F V E+A+G ++ V P Q L KI+ DEL LMGGEV
Sbjct: 31 MKEIRKALLDADVNYKTAKSFTDEVKEKALGANVLTAVSPGQLLTKIMNDELAALMGGEV 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+EL K+ PT+IL+AGL G GKTT + KLAN+LK +GK +LVAGDVYRPAA+DQL IL
Sbjct: 91 TELDL-KTNPTIILIAGLNGAGKTTFTGKLANFLKNKGKKPLLVAGDVYRPAAVDQLQIL 149
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+GVPVY P IA +G+ E KK+ +V+I+DTAGRL ID+ MMDE+ VK
Sbjct: 150 GEQIGVPVYANTASKDPVGIALEGIAEGKKQQNNVIIIDTAGRLAIDEQMMDEIAAVKES 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+L VVDAMTGQ+A FN + TG +LTKLDGD+RGGAALS+K V KPIK
Sbjct: 210 TKPHEILFVVDAMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAALSIKSVVNKPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+ME L+ FYP+RMA RILGMGDV+S VE+AQ+ +++A E+QKKI FDFN
Sbjct: 270 FIGTGEKMEALDVFYPERMASRILGMGDVVSLVERAQQQFDEKEAAELQKKIRKNKFDFN 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF Q + + +MG+M ++GMIPG+GK+ V + + K +EA+I++MT ERE P+
Sbjct: 330 DFYNQIQQIKKMGNMKDLMGMIPGVGKMMK-NVDIEDDAFKNVEAIIQSMTKYERENPDS 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ +S RR R+A+ SG ++V++L+ Q MR MK
Sbjct: 389 IQQS--RRLRIAKGSGNKIEEVTKLIKQFEDMRKVMKQF 425
>gi|312134783|ref|YP_004002121.1| signal recognition particle protein [Caldicellulosiruptor
owensensis OL]
gi|311774834|gb|ADQ04321.1| signal recognition particle protein [Caldicellulosiruptor
owensensis OL]
Length = 443
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/399 (51%), Positives = 283/399 (70%), Gaps = 2/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++++ ALLEADV+ VV+ F+ V+++AVG ++ + P QQ++KIV DE+V L+GG
Sbjct: 31 MKEVKLALLEADVNYKVVKDFINNVTQKAVGEEVLESLTPAQQVIKIVYDEMVNLLGGSD 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L F+ S ++ ++ GLQG GKTT + KLA LKKQGK+ +LVA D+YRPAAI QL ++
Sbjct: 91 AKLTFSPSGFSIYMMVGLQGSGKTTTAGKLAGLLKKQGKNPLLVACDIYRPAAIKQLEVV 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
++VGV Y T +IAK G+E AK DVVI+DTAGRL I++ +MDELK++K
Sbjct: 151 AQKVGVKCYADYTSQDAVKIAKDGIEFAKSNRSDVVIIDTAGRLHINQELMDELKNIKNA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ PTE+LLVVDAMTGQ+A + FN ++GI G I+TKLDGD+RGGAALSVK ++GKPIK
Sbjct: 211 VKPTEILLVVDAMTGQDAVNVAEAFNAQLGIDGIIMTKLDGDTRGGAALSVKAITGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+MEDLEPFYPDRMA RILGMGD+L+ +EKAQE + Q+ AEE++KK+ S F
Sbjct: 271 FAGVGEKMEDLEPFYPDRMASRILGMGDILTLIEKAQEAIDQKKAEELEKKLRSMQFTLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +MT EER+ P +
Sbjct: 331 DFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKELKKIEAIINSMTREERQDPSI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 391 INSS--RKRRIAMGSGTTVQDVNRLLKQFEDMKRMMKQF 427
>gi|423138302|ref|ZP_17125945.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
animalis F0419]
gi|371958340|gb|EHO76059.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
animalis F0419]
Length = 443
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/416 (50%), Positives = 296/416 (71%), Gaps = 11/416 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +IRGV P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNKISEKAIGTEVIRGVNPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK++K+
Sbjct: 151 GQQIGVDVYSEENSKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMEELKELKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQSMTKEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL------MGVM-EGGSLP 409
L S R+ R+A+ SG V++L+ Q QM+ MK MG+M +GG P
Sbjct: 389 LKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPMGLMGKGGKFP 442
>gi|336419495|ref|ZP_08599757.1| signal recognition particle protein [Fusobacterium sp. 11_3_2]
gi|336163626|gb|EGN66544.1| signal recognition particle protein [Fusobacterium sp. 11_3_2]
Length = 443
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/416 (50%), Positives = 296/416 (71%), Gaps = 11/416 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +IRGV P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNKISEKAIGTEVIRGVNPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +++ +M+ELK++K+
Sbjct: 151 GQQIGVDVYSEENSKDVVGIATRAIEKAKEINATYMIVDTAGRLHVNETLMEELKELKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTKEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL------MGVM-EGGSLP 409
L S R+ R+A+ SG V++L+ Q QM+ MK MG+M +GG P
Sbjct: 389 LKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPMGLMGKGGKFP 442
>gi|340758049|ref|ZP_08694641.1| signal recognition particle protein [Fusobacterium varium ATCC
27725]
gi|251836338|gb|EES64875.1| signal recognition particle protein [Fusobacterium varium ATCC
27725]
Length = 446
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/409 (49%), Positives = 289/409 (70%), Gaps = 8/409 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++R +LLEADV+ VV+ F + E++VG +++G+ P QQ +K+V DELV+L+GG
Sbjct: 31 LKEVRMSLLEADVNYKVVKDFTNKILEKSVGTDVLKGINPGQQFIKVVNDELVELLGGTN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L PTV++L+GLQG GKTT + KLANYLKKQG+S ++V DVYRPAAI QL +L
Sbjct: 91 SRLTKGVRNPTVLMLSGLQGAGKTTFAVKLANYLKKQGESVLMVGADVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPVY I + GL +AK+ N +I+DTAGRL ID+ +M+EL+ +K+
Sbjct: 151 GEQINVPVYAEEDNKDTVAICEHGLAKAKELNSTYMIIDTAGRLHIDEKLMEELRSIKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L FN + I G +LTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 VRPQEILLVVDAMIGQDAVNLAEAFNNVLSIDGIVLTKLDGDTRGGAALSIKSVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GER++D+E F+P+R+ RILGMGDV+S VEKAQ + ++DA+ +++KI + FD N
Sbjct: 271 FVGVGERIDDIELFHPERLVSRILGMGDVVSLVEKAQSAIDEDDAKSLEEKIRTQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ + + ++GS+ ++ MIPGMG+I + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQNIKKLGSLGSILKMIPGMGQI--GDIAPAEKEMKKVEAIIQSMTKEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 409
L S R+KR+A SG V++L+ Q Q MK +M + GG +P
Sbjct: 389 LKAS--RKKRIALGSGTEVADVNRLLKQFEQ----MKGMMKMFSGGKMP 431
>gi|340749889|ref|ZP_08686736.1| signal recognition particle protein [Fusobacterium mortiferum ATCC
9817]
gi|229419531|gb|EEO34578.1| signal recognition particle protein [Fusobacterium mortiferum ATCC
9817]
Length = 449
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/411 (49%), Positives = 293/411 (71%), Gaps = 8/411 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++ +LLEADV+ VV+ F + E+A+G +++G+ P QQ +KIV DELV+L+GG
Sbjct: 31 LKEVKMSLLEADVNYKVVKDFTAKIQEKAIGTDVLKGINPGQQFIKIVNDELVELLGGTN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L PTV++LAGLQG GKTT +AKL NYLKKQG+ ++V DVYRPAAI QL +L
Sbjct: 91 ARLTKGVRNPTVLMLAGLQGAGKTTFAAKLGNYLKKQGEKVLMVGADVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ G+ VY+ I ++GL +AK+ +I+DTAGRL ID+ +MDELK++KR+
Sbjct: 151 GEQTGIEVYSEENHQDAVGICERGLAKAKELGSTYMIIDTAGRLHIDEKLMDELKEIKRL 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQ+A L +FN + I G +LTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 TRPQEILLVVDAMIGQDAVNLAESFNNVLNIDGVVLTKLDGDTRGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++D+E F+P+R+ RILGMGDV+S VEKAQ + +EDA+ +++KI + FD +
Sbjct: 271 FVGVGEKIDDIELFHPERLVSRILGMGDVVSLVEKAQSAIDEEDAKSLEEKIRTQKFDLD 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ + + ++GS+ ++ MIPGMG+I + AEK +K +EA+I++MT EER+KPE+
Sbjct: 331 DFLKQLQNIKKLGSLGSILKMIPGMGQI--GDLAPAEKEMKKVEAIIQSMTKEERKKPEI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
L S R++R+A+ SG +++L+ Q QM+ MK + GG +P+L
Sbjct: 389 LKAS--RKQRIAKGSGTEVADINRLLKQFEQMKAMMK----MFSGGKIPSL 433
>gi|392957499|ref|ZP_10323022.1| signal recognition particle protein [Bacillus macauensis ZFHKF-1]
gi|391876462|gb|EIT85059.1| signal recognition particle protein [Bacillus macauensis ZFHKF-1]
Length = 447
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 297/401 (74%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ V+E+AVG +++ + P QQ+VK+V DEL L+GGE
Sbjct: 32 MREVRLALLEADVNFRVVKDFIKKVTERAVGQEVLKSLTPGQQVVKVVHDELTTLLGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVI 119
S+L PTVI++ GLQG GKTT + KLAN+L+K+ + +LVA D+YRPAAI QL
Sbjct: 92 SKLAVGTKPPTVIMMVGLQGAGKTTTTGKLANHLRKKLNRQPLLVAADIYRPAAIQQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IA + LE+AK ++ D VI+DTAGRL ID+ +M+EL+ VK
Sbjct: 152 LGKQLSLPVFSMGDQVSPVEIATKALEKAKAEHYDYVIIDTAGRLHIDEVLMEELQQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+LLVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 IANPHEILLVVDSMTGQDAVNVAESFNEKLGVTGVVLTKLDGDTRGGAALSIKAVTNLPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+M+ LEPF+PDRM+ RILGMGDVL+ +EKAQ + +E A+E+QKK+ +F F
Sbjct: 272 KFAGMGEKMDALEPFHPDRMSSRILGMGDVLTLIEKAQTTVDEEKAKELQKKMRDMSFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + +++GM+PG GK+ + V EK + +EA+I++MT ERE+P
Sbjct: 332 DDFLEQMGQVRNLGPLDQLLGMMPGAGKMKGLKNVSIDEKQISHVEAIIKSMTKLEREQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E+++ S R++R+A SG+T Q+V++L+ Q M+ MK +
Sbjct: 392 EIISAS--RKRRIANGSGRTVQEVNRLIKQFEDMKKMMKQM 430
>gi|392989044|ref|YP_006487637.1| signal recognition particle protein [Enterococcus hirae ATCC 9790]
gi|392336464|gb|AFM70746.1| signal recognition particle protein [Enterococcus hirae ATCC 9790]
Length = 472
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/401 (51%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+A+GV ++ + P QQ+VKIV +EL +G E
Sbjct: 32 MREIRLALLEADVNLQVVKDFTKRVRERAIGVEVLESLTPAQQIVKIVDEELTITLGAET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
EL + PTVI++AGLQG GKTT + KLANYLKK + +L+AGDVYRPAAIDQL +
Sbjct: 92 VELNKSPKIPTVIMMAGLQGAGKTTFTGKLANYLKKNENARPLLIAGDVYRPAAIDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GT+V P +I +QG+E AK+K D V++DTAGRL ID+ +MDELK +K
Sbjct: 152 LGQQLDVPVFDMGTDVSPVEIVRQGMELAKEKKNDYVLIDTAGRLHIDETLMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAALS++ V+G PI
Sbjct: 212 LTQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAALSIRSVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE++ DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+ KK+ +FDF
Sbjct: 272 KFIGSGEKLTDLEVFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELAKKMRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF++Q V MG + +I MIPGM ++ + V+ K ++ +AM+ +MTP ERE P
Sbjct: 332 NDFIEQLDQVMGMGPLEDLIKMIPGMNQVPGIENVKVDPKDVERKKAMVYSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 392 DLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|398814569|ref|ZP_10573250.1| signal recognition particle protein [Brevibacillus sp. BC25]
gi|398036838|gb|EJL30047.1| signal recognition particle protein [Brevibacillus sp. BC25]
Length = 470
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 289/401 (72%), Gaps = 3/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+AVG +++ + P Q ++KIV +ELV LMGG V
Sbjct: 32 MREVRLALLEADVNFKVVKDFVARVKERAVGQEVMKSLTPGQMVIKIVNEELVALMGGNV 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L A PTVI++AGLQG GKTT + KLA YL+KQ + +LVAGD+YRPAAI QL +L
Sbjct: 92 AQLTMAHRPPTVIMMAGLQGAGKTTTTGKLAKYLQKQNRKPLLVAGDIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+T G +V P +IA+Q +E AK ++DVV++DTAGRL ID+A+MDELK ++ V
Sbjct: 152 GDQLNVPVFTLGDQVSPVEIARQAIEHAKTNHLDVVLIDTAGRLHIDEALMDELKQIREV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+MTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+GKPIK
Sbjct: 212 TKPDEILLVVDSMTGQDAVNVAESFNSQLELTGVVLTKLDGDTRGGAALSVKAVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ LEPF+PDRMA RILGMGDVLS +EKAQ + ++ A +M++++ F F+
Sbjct: 272 FAAMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQASVDEDKARDMERQMRQGEFTFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
FL + + +G ++GM+PGM K+ ++ EK + +EA+ ++MT +ER P+L
Sbjct: 332 MFLDSMQQLRNLGPFEDILGMLPGMNKMK-GKMNVDEKQIARVEAIAKSMTKQERANPDL 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
L + RRKR+A SG + Q+V++ + Q +M+ MK G
Sbjct: 391 LNAN--RRKRIASGSGTSIQEVNRFLKQFEEMKKMMKQFSG 429
>gi|254304380|ref|ZP_04971738.1| IISP Type II signal recognition particle GTPase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
gi|148324572|gb|EDK89822.1| IISP Type II signal recognition particle GTPase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
Length = 444
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/417 (50%), Positives = 295/417 (70%), Gaps = 12/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +IRGV P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNKISEKAIGTEVIRGVNPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLEVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK++K+
Sbjct: 151 GQQIGVDVYSEEDNKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDETLMEELKELKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTKEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGSLP 409
L S R+ R+A+ SG V++L+ Q QM+ MK N+ + +GG P
Sbjct: 389 LKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNIGAMGKGGKFP 443
>gi|315917604|ref|ZP_07913844.1| signal recognition particle protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|313691479|gb|EFS28314.1| signal recognition particle protein [Fusobacterium gonidiaformans
ATCC 25563]
Length = 449
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/414 (48%), Positives = 299/414 (72%), Gaps = 8/414 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++ +LLEADV+ VV+ F++++ E+A+G +++G+ P QQ +K+V DELV+L+GG
Sbjct: 31 LKEVKMSLLEADVNYKVVKDFIESIREKAIGTEVLKGINPGQQFIKLVNDELVQLLGGTN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A PTV++L+GLQG GKTT + KLA +LKKQ + +LVA DVYRPAAI QL +L
Sbjct: 91 ARLTKAPKNPTVLMLSGLQGAGKTTFAGKLAKFLKKQNEKVLLVAADVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QV V VY I ++ LE+AK+++ +I+DTAGRL ID+A+M+EL+++KR+
Sbjct: 151 GQQVDVAVYAEEGHQDVLGICERALEKAKEEHATYMIIDTAGRLHIDEALMEELRNIKRL 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQ+A L +FN + I G +LTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 TRPQEILLVVDSMIGQDAVNLAKSFNESLSIDGVVLTKLDGDTRGGAALSIKSVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+++D+E F+PDR+ RILGMGDV+S VEKAQ +++EDA+ +++KI + FD N
Sbjct: 271 FIGVGEKLDDIELFHPDRLVSRILGMGDVVSLVEKAQSAIEEEDAKSLEEKIRTQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ + + ++GS+ ++ +IPGMG+I + AEK +K +EA+I++MT +ER+KPE+
Sbjct: 331 DFLKQLQNIKKLGSLGSILKLIPGMGQI--GDLAPAEKEMKKVEAIIQSMTKQERKKPEI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
L S R++R+A+ SG +++L+ Q QM+ MK + GG +P NL
Sbjct: 389 LKAS--RKQRIAKGSGTDVADINRLLKQFDQMKTMMK----MFAGGKMPNFPNL 436
>gi|317133004|ref|YP_004092318.1| signal recognition particle protein [Ethanoligenens harbinense
YUAN-3]
gi|315470983|gb|ADU27587.1| signal recognition particle protein [Ethanoligenens harbinense
YUAN-3]
Length = 443
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/402 (51%), Positives = 289/402 (71%), Gaps = 4/402 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ + ++FV V+E+A+G ++ + P QQ++KIV +EL LMGGE
Sbjct: 32 MREVRLALLEADVNYKIAKQFVNDVTERAIGSAVLESLTPAQQVIKIVNEELTALMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S + +A PTVILL GLQG GKTT +AKLA +KKQGK +L A DVYRPAAI QL ++
Sbjct: 92 SRIRYASKPPTVILLCGLQGSGKTTHAAKLALSMKKQGKRPLLAACDVYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE+ GVPV+ G + P +IAK L AK DV+I+DTAGRL +D+A+MDELK +K
Sbjct: 152 GEKAGVPVFEQG-QGDPVKIAKAALHHAKDHGSDVLILDTAGRLHVDEALMDELKRIKAA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + ++FN +GI G ILTKLDGD+RGGAALSV+ V+GKPIK
Sbjct: 211 VEPDEILLVVDAMTGQDAVNVASSFNEVLGIDGVILTKLDGDTRGGAALSVRAVTGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++DLEPF+P+RMA RILGMGD+L+ +EKA++ + Q+ A EM KK+ DFN
Sbjct: 271 FAGTGEKLDDLEPFHPERMASRILGMGDMLTLIEKAEQEVDQKKAAEMAKKLKHNAIDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+ R + +MGS+S V+ M+PG+ GK++ Q+ + E +K EA+I +MT ERE+PE
Sbjct: 331 DFLESIRQMKKMGSLSSVMNMLPGVRGKVSEEQMDKGEIEMKRTEAIITSMTAYERERPE 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+ +P R++R+A SG + V++L+ Q R MK + G
Sbjct: 391 SI--NPSRKRRIASGSGTKVEDVNRLLRNFEQTRKMMKQMGG 430
>gi|317059129|ref|ZP_07923614.1| signal recognition particle protein [Fusobacterium sp. 3_1_5R]
gi|313684805|gb|EFS21640.1| signal recognition particle protein [Fusobacterium sp. 3_1_5R]
Length = 449
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/414 (48%), Positives = 299/414 (72%), Gaps = 8/414 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++ +LLEADV+ VV+ F++++ E+A+G +++G+ P QQ +K+V DELV+L+GG
Sbjct: 31 LKEVKMSLLEADVNYKVVKDFIESIREKAIGTEVLKGINPGQQFIKLVNDELVQLLGGTN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A PTV++L+GLQG GKTT + KLA +LKKQ + +LVA DVYRPAAI QL +L
Sbjct: 91 ARLTKAPKNPTVLMLSGLQGAGKTTFAGKLAKFLKKQNEKVLLVAADVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QV V VY I ++ LE+AK+++ +I+DTAGRL ID+A+M+EL+++KR+
Sbjct: 151 GQQVDVAVYAEEGHQDVLGICERALEKAKEEHATYMIIDTAGRLHIDEALMEELRNIKRL 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQ+A L +FN + I G +LTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 TRPQEILLVVDSMIGQDAVNLAKSFNESLSIDGVVLTKLDGDTRGGAALSIKSVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+++D+E F+PDR+ RILGMGDV+S VEKAQ +++EDA+ +++KI + FD N
Sbjct: 271 FIGVGEKLDDIELFHPDRLVSRILGMGDVVSLVEKAQSAIEEEDAKSLEEKIRTQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ + + ++GS+ ++ +IPGMG+I + AEK +K +EA+I++MT +ER+KPE+
Sbjct: 331 DFLKQLQNIKKLGSLGSILKLIPGMGQI--GDLAPAEKEMKKVEAIIQSMTKQERKKPEI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
L S R++R+A+ SG +++L+ Q QM+ MK + GG +P NL
Sbjct: 389 LKAS--RKQRIARGSGTDVADINRLLKQFDQMKTMMK----MFAGGKMPNFPNL 436
>gi|442804649|ref|YP_007372798.1| signal recognition particle protein Ffh [Clostridium stercorarium
subsp. stercorarium DSM 8532]
gi|442740499|gb|AGC68188.1| signal recognition particle protein Ffh [Clostridium stercorarium
subsp. stercorarium DSM 8532]
Length = 447
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/397 (50%), Positives = 287/397 (72%), Gaps = 2/397 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F+ VSE+AVG ++ + P QQ++KIV +EL++LMGG V
Sbjct: 32 MREVRMALLEADVNYKVVKDFIAKVSERAVGQEVLESLTPGQQVIKIVHEELIQLMGGAV 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L + S PTV ++ GLQG GKTTV KLANYL+KQGK +LVA DVYRPAA+ QL +L
Sbjct: 92 AKLTVSPSPPTVYMMVGLQGAGKTTVCGKLANYLRKQGKRPLLVACDVYRPAAVKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV+ GT P +IAK+ ++ A+ D VI+DTAGRL ID+ +M EL+++K
Sbjct: 152 GKQIDIPVFEMGTGTSPVEIAKKSVDYARSMQFDTVIIDTAGRLHIDEELMHELENIKLS 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + +FN + I G ILTKLDGD+RGGAALS K V+GKP+K
Sbjct: 212 VKPHEILLVVDSMTGQDAVNVAESFNNRLDIDGIILTKLDGDTRGGAALSTKAVTGKPVK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++ D EPFYPDRMA RILGMGDVL+ +EKAQ ++ A E++KK+ + F +
Sbjct: 272 FVGIGEKLSDFEPFYPDRMASRILGMGDVLTLIEKAQASFDEKKALELEKKLRTQQFTLD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q + + MG +S+ +GM+PG+ ++ EK + +EA+I++MT +ERE P +
Sbjct: 332 DFLEQLQQIKNMGPISQFLGMLPGVNSKVLKDIQIDEKQMVYVEAIIQSMTKKERENPSI 391
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
+ S R++R+A+ SG + QQV+Q++ Q Q++ MK
Sbjct: 392 INSS--RKRRIAEGSGTSIQQVNQVLKQFEQVKKMMK 426
>gi|422933064|ref|ZP_16965988.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
gi|339891771|gb|EGQ80711.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
Length = 443
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/416 (50%), Positives = 296/416 (71%), Gaps = 11/416 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +IRGV P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNKISEKAIGTEVIRGVNPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK++K+
Sbjct: 151 GQQIGVDVYSEENSEDVVGIATRAIEKAKEINATYMIVDTAGRLHVDEILMEELKELKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQSMTKEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL------MGVM-EGGSLP 409
L S R+ R+A+ SG V++L+ Q QM+ MK MG+M +GG P
Sbjct: 389 LKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPMGLMGKGGKFP 442
>gi|28210935|ref|NP_781879.1| signal recognition particle, subunit ffh/srp54 [Clostridium tetani
E88]
gi|28203374|gb|AAO35816.1| signal recognition particle, subunit ffh/srp54 [Clostridium tetani
E88]
Length = 451
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/404 (48%), Positives = 294/404 (72%), Gaps = 2/404 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ +V+ FV++VSE+ G ++ + P QQ+VKIV DEL++LMG +
Sbjct: 32 MREVRLALLEADVNYKIVKDFVKSVSEKCNGKEVLESLTPGQQVVKIVNDELIELMGSKE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SE+ F ++PTVI+L GLQG GKTT++ KLA L+K+ K +LVA D+YRPAAI QL ++
Sbjct: 92 SEINFEANKPTVIMLVGLQGAGKTTMAGKLALQLRKKNKKPLLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+T G + P I+K ++ AK+ N++ +I+DTAGRL ID+ +MDELK +K
Sbjct: 152 GSQIDVPVFTLGDKTNPVDISKAAIKHAKENNLNTIIIDTAGRLHIDENLMDELKSIKEN 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+MTGQ+A + +FN ++ I+G ILTKLDGD+RGGAALS+K ++GKPIK
Sbjct: 212 IEPNEVLLVVDSMTGQDAINVAESFNEKLNISGVILTKLDGDTRGGAALSIKAMTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+M DLE FYP+RMA RILGMGDVLS +EKA++ + +++AE++ +IM+ F+
Sbjct: 272 FIGIGEKMNDLEVFYPERMASRILGMGDVLSLIEKAEQEIDKDEAEKIGSRIMNQEFNLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL + + ++G +++++ M+PG ++ + EK LK +E++I +MT +ER+ P
Sbjct: 332 DFLSAMQQMKKLGPLNKLVEMLPGANSKELKGIDFDKGEKDLKRIESIISSMTIKERKNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
L++ SP R+KR+A SG T QQV++++ MR MK + G+
Sbjct: 392 SLVSGSPTRKKRIANGSGTTVQQVNKILKDFENMRKMMKQMNGI 435
>gi|297544730|ref|YP_003677032.1| signal recognition particle protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842505|gb|ADH61021.1| signal recognition particle protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 446
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 285/402 (70%), Gaps = 2/402 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+ +V+E+A+G ++ + P QQ++KIV DEL+ LMG
Sbjct: 32 MREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESLTPGQQVIKIVNDELIALMGSTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L P VI++ GLQG GKTT KLAN LKKQGK+ +LVA DV RPAAI QL ++
Sbjct: 92 SRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACDVVRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G V VPV+T G + P IAK ++ A+ N DV+I+DTAGRL ID+ +M+EL ++KR
Sbjct: 152 GANVNVPVFTMGDKANPVDIAKASIDYARSHNSDVIIIDTAGRLHIDEELMEELVNIKRA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + ++FN + ITG ILTKLDGD+RGGAALS+K V+ KPIK
Sbjct: 212 VQPDEILLVVDAMTGQDAVNVASSFNERLDITGVILTKLDGDTRGGAALSIKAVTQKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++ DLEPFYP+RMA RILGMGDVL+ +EKAQ + ++ A+E+ +K+++ F
Sbjct: 272 YVGTGEKLTDLEPFYPNRMASRILGMGDVLTLIEKAQAAIDEKKAQELGQKLLTKQFTLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q +++ MG + +++ MIPGM K V +EK LK +EA+I++MT EER+ P +
Sbjct: 332 DFLEQLQSLKNMGPLDQLLSMIPGMNKNMLKNVDISEKDLKRIEAIIQSMTKEERQNPSI 391
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+ S R+KR+A+ SG T QQV+ L+ Q + + MK +
Sbjct: 392 INGS--RKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADI 431
>gi|237741085|ref|ZP_04571566.1| signal recognition particle protein [Fusobacterium sp. 4_1_13]
gi|256846224|ref|ZP_05551681.1| signal recognition particle protein [Fusobacterium sp. 3_1_36A2]
gi|229430617|gb|EEO40829.1| signal recognition particle protein [Fusobacterium sp. 4_1_13]
gi|256717993|gb|EEU31549.1| signal recognition particle protein [Fusobacterium sp. 3_1_36A2]
Length = 444
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/417 (50%), Positives = 295/417 (70%), Gaps = 12/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +IRG+ P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNKISEKAIGTEVIRGINPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL ID+ +M+ELK++KR
Sbjct: 151 GQQIGVDVYSEEDTKDVVGIATRAIEKAKEINATYMIVDTAGRLHIDETLMEELKELKRA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQSMTKEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGSLP 409
L S R+ R+A+ SG V++L+ Q QM+ MK N+ + +GG P
Sbjct: 389 LKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNIGAMGKGGKFP 443
>gi|237745294|ref|ZP_04575775.1| signal recognition particle, subunit FFH/SRP54 [Fusobacterium sp.
7_1]
gi|229432523|gb|EEO42735.1| signal recognition particle, subunit FFH/SRP54 [Fusobacterium sp.
7_1]
Length = 444
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/417 (50%), Positives = 294/417 (70%), Gaps = 12/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +IRGV P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNKISEKAIGTEVIRGVNPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL +D+ +M+ELK++K+
Sbjct: 151 GQQIGVDVYSEENSKDVVGIATRAIEKAKEINATYMIVDTAGRLHVDEILMEELKELKKA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+ GGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTHGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPGM KI + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGMPKID--DLAPAEKEMKKVEAIIQSMTKEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL-------MGVM-EGGSLP 409
L S R+ R+A+ SG V++L+ Q QM+ MK MG M +GG P
Sbjct: 389 LKAS--RKIRIAKGSGTEVSDVNKLLKQFDQMKSMMKMFSSGKMPNMGAMGKGGKFP 443
>gi|393201748|ref|YP_006463590.1| signal recognition particle GTPase [Solibacillus silvestris
StLB046]
gi|406664625|ref|ZP_11072400.1| Signal recognition particle GTPase [Bacillus isronensis B3W22]
gi|327441079|dbj|BAK17444.1| signal recognition particle GTPase [Solibacillus silvestris
StLB046]
gi|405387473|gb|EKB46897.1| Signal recognition particle GTPase [Bacillus isronensis B3W22]
Length = 452
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/404 (51%), Positives = 302/404 (74%), Gaps = 4/404 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R AL+EADV+L VV+ FV+ VSE+AVGV +++ + P QQ++KIV+DEL LMGGE
Sbjct: 32 MREVRFALIEADVNLKVVKEFVKKVSERAVGVDVMKSLTPGQQVIKIVQDELKNLMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S + F+ PTVI++ GLQG GKTT + KLAN L KK K +LVA D+YRPAA++QL
Sbjct: 92 SPIKFSNRPPTVIMMVGLQGAGKTTTTGKLANVLRKKYNKKPLLVAADIYRPAAVEQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ GT+V P +IA+Q +E AK++++DVV++DTAGRL ID+ +M ELKD++
Sbjct: 152 LGKQLSLPVFSLGTDVSPVEIARQAIEHAKEEHLDVVLIDTAGRLHIDEELMQELKDIRG 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P EV LVVDAMTGQ+A + +FN +GITG +LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 LKEPDEVFLVVDAMTGQDAVNVAQSFNETVGITGVVLTKLDGDTRGGAALSIRSVTEKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ LEPF+P+RMA RILGMGDVLS +EKAQ + E A+E+++K M+ +F F
Sbjct: 272 KFVGMGEKMDALEPFHPERMASRILGMGDVLSLIEKAQANVDMEKAKELEEKFMTQSFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DF++Q + V +MG + ++ MIPG K+ V+ EK + +EA+I +MTP E+ P
Sbjct: 332 DDFIEQLQAVKKMGPLDELLKMIPGANKMKGLDNVKVDEKQMGRIEAIIYSMTPNEKTNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
E+++ S R+KR+A SG T Q+V++L+ Q +M+ MK + G+
Sbjct: 392 EIISAS--RKKRIATGSGTTIQEVNRLLKQFEEMKKMMKQMTGM 433
>gi|289578454|ref|YP_003477081.1| signal recognition particle protein [Thermoanaerobacter italicus
Ab9]
gi|289528167|gb|ADD02519.1| signal recognition particle protein [Thermoanaerobacter italicus
Ab9]
Length = 446
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/402 (50%), Positives = 285/402 (70%), Gaps = 2/402 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+ +V+E+A+G ++ + P QQ++KIV DEL+ LMG
Sbjct: 32 MREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESLTPGQQVIKIVNDELIALMGSTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L P VI++ GLQG GKTT KLAN LKKQGK+ +LVA DV RPAAI QL ++
Sbjct: 92 SRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACDVVRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G V VPV+T G + P IAK ++ A+ N DV+I+DTAGRL ID+ +M+EL ++KR
Sbjct: 152 GANVNVPVFTMGDKANPVDIAKASIDYARSHNSDVIIIDTAGRLHIDEELMEELVNIKRA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + ++FN + ITG +LTKLDGD+RGGAALS+K V+ KPIK
Sbjct: 212 VQPDEILLVVDAMTGQDAVNVASSFNERLDITGVVLTKLDGDTRGGAALSIKAVTQKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++ DLEPFYP+RMA RILGMGDVL+ +EKAQ + ++ A+E+ +K+++ F
Sbjct: 272 YVGTGEKLTDLEPFYPNRMASRILGMGDVLTLIEKAQAAIDEKKAQELGQKLLTKQFTLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q +++ MG + +++ MIPGM K V +EK LK +EA+I++MT EER+ P +
Sbjct: 332 DFLEQLQSLKNMGPLDQLLSMIPGMNKNMLKNVDISEKDLKRIEAIIQSMTKEERQNPSI 391
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+ S R+KR+A+ SG T QQV+ L+ Q + + MK +
Sbjct: 392 INGS--RKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADI 431
>gi|431771034|ref|ZP_19559423.1| signal recognition particle protein [Enterococcus faecium E1644]
gi|431772480|ref|ZP_19560819.1| signal recognition particle protein [Enterococcus faecium E2369]
gi|430634058|gb|ELB70199.1| signal recognition particle protein [Enterococcus faecium E1644]
gi|430637931|gb|ELB73923.1| signal recognition particle protein [Enterococcus faecium E2369]
Length = 472
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/401 (51%), Positives = 291/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+AVG ++ + P QQ+VKIV +EL +G E
Sbjct: 32 MREIRLALLEADVNLQVVKNFTKRVRERAVGAEVLESLSPAQQIVKIVDEELTITLGSET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
+EL + PTVI++AGLQG GKTT + KLANYLKK + +L+AGDVYRPAAIDQL +
Sbjct: 92 AELNKSPKIPTVIMMAGLQGAGKTTFTGKLANYLKKNENARPLLIAGDVYRPAAIDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GTEV P +I +QG+E AK+K D V++DTAGRL ID+ +MDELK +K
Sbjct: 152 LGQQLDVPVFDMGTEVSPVEIVRQGMELAKEKKNDYVLIDTAGRLHIDETLMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAALS++ V+G PI
Sbjct: 212 LTQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAALSIRSVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE++ DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+ +K+ +FDF
Sbjct: 272 KFIGSGEKLTDLEVFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELAQKMRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF++Q V MG + +I MIPGM ++ + V+ K ++ +AM+ +MTP ER P
Sbjct: 332 NDFIEQLDQVVGMGPLEDLIKMIPGMNQVPGIENVKVDPKDVERKKAMVYSMTPAERANP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 392 DLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|294786046|ref|ZP_06751331.1| signal recognition particle protein [Fusobacterium sp. 3_1_27]
gi|294486268|gb|EFG33633.1| signal recognition particle protein [Fusobacterium sp. 3_1_27]
Length = 444
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/417 (50%), Positives = 295/417 (70%), Gaps = 12/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +I+GV P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNKISEKAIGTEVIKGVNPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL ID+ +M+ELK++KR
Sbjct: 151 GQQIGVDVYSEEDTKDVVGIATRAIEKAKEINATYMIVDTAGRLHIDETLMEELKELKRA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQSMTKEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGSLP 409
L S R+ R+A+ SG V++L+ Q QM+ MK N+ + +GG P
Sbjct: 389 LKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNIGAMGKGGKFP 443
>gi|294622904|ref|ZP_06701817.1| signal recognition particle protein [Enterococcus faecium U0317]
gi|425030604|ref|ZP_18435770.1| signal recognition particle protein [Enterococcus faecium 515]
gi|431301266|ref|ZP_19507585.1| signal recognition particle protein [Enterococcus faecium E1626]
gi|431775548|ref|ZP_19563820.1| signal recognition particle protein [Enterococcus faecium E2560]
gi|291597676|gb|EFF28829.1| signal recognition particle protein [Enterococcus faecium U0317]
gi|403017277|gb|EJY30044.1| signal recognition particle protein [Enterococcus faecium 515]
gi|430580456|gb|ELB18923.1| signal recognition particle protein [Enterococcus faecium E1626]
gi|430642817|gb|ELB78583.1| signal recognition particle protein [Enterococcus faecium E2560]
Length = 472
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/401 (51%), Positives = 291/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+AVG ++ + P QQ+VKIV +EL +G E
Sbjct: 32 MREIRLALLEADVNLQVVKNFTKRVRERAVGAEVLESLSPAQQIVKIVDEELTITLGSET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
+EL + PTVI++AGLQG GKTT + KLANYLKK + +L+AGDVYRPAAIDQL +
Sbjct: 92 AELNKSPKIPTVIMMAGLQGAGKTTFTGKLANYLKKNENARPLLIAGDVYRPAAIDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GTEV P +I +QG+E AK+K D V++DTAGRL ID+ +MDELK +K
Sbjct: 152 LGQQLDVPVFDMGTEVSPVEIVRQGMELAKEKKNDYVLIDTAGRLHIDETLMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAALS++ V+G PI
Sbjct: 212 LTQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAALSIRSVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE++ DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+ +K+ +FDF
Sbjct: 272 KFIGSGEKLTDLEVFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELAQKMRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF++Q V MG + +I MIPGM ++ + V+ K ++ +AM+ +MTP ER P
Sbjct: 332 NDFIEQLDQVMGMGPLEDLIKMIPGMNQVPGIENVKVDPKDVERKKAMVYSMTPAERANP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 392 DLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|421146007|ref|ZP_15605809.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395487592|gb|EJG08545.1| signal recognition particle protein [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 444
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/417 (50%), Positives = 295/417 (70%), Gaps = 12/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +I+GV P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNKISEKAIGTEVIKGVNPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL ID+ +M+ELK++KR
Sbjct: 151 GQQIGVDVYSEEDTKDVVGIATRAIEKAKEINATYMIVDTAGRLHIDETLMEELKELKRA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDARGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E F+PDR+ RILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFHPDRLVSRILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQSMTKEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGSLP 409
L S R+ R+A+ SG V++L+ Q QM+ MK N+ + +GG P
Sbjct: 389 LKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNIGAMGKGGKFP 443
>gi|260583609|ref|ZP_05851357.1| signal recognition particle protein [Granulicatella elegans ATCC
700633]
gi|260158235|gb|EEW93303.1| signal recognition particle protein [Granulicatella elegans ATCC
700633]
Length = 478
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/413 (49%), Positives = 293/413 (70%), Gaps = 8/413 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ V+E+A+G ++ + P QQ+VKIV +EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVRKVNERALGSNVLEALSPAQQVVKIVNEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S F+ PTV+++ GLQG GKTT + KLA++L K + K +LVA DVYRPAAIDQL
Sbjct: 92 SPFQFSPKPPTVVMMIGLQGAGKTTTAGKLASFLAKHENKRPLLVAADVYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ PV++ GT+V P +IA+Q +E A + D+VI+DTAGRL ID+A+M+EL+++K
Sbjct: 152 LGKQLNYPVFSLGTDVNPVEIARQAIERATIEGRDLVIIDTAGRLHIDEALMEELQNIKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP E+LLVVD MTGQ+A + TFN + ITG ILTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 VANPNEILLVVDVMTGQDAVNVAETFNERLDITGVILTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K GRGE++ED E FYP+RMA RILGMGD+++ +EKAQ+ + A+EM KI + FDF
Sbjct: 272 KFSGRGEKLEDFEIFYPERMASRILGMGDIMTLIEKAQQDFDEAKAQEMADKIKANTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF+ Q V +MG + ++ MIPG+ KI ++ K M+A++ +MTP ERE P
Sbjct: 332 NDFIDQLDQVNKMGPLEDILKMIPGLNKIPGLNDLKVDPKDTARMKAIVLSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
++L+++ RRKR+A S + +V++L+ Q + K +M M G++ A+
Sbjct: 392 DILSQA--RRKRIAAGSARPLAEVNRLIKQFNE----SKKMMNQMSNGNMQAM 438
>gi|149280108|ref|ZP_01886232.1| signal recognition particle protein [Pedobacter sp. BAL39]
gi|149229122|gb|EDM34517.1| signal recognition particle protein [Pedobacter sp. BAL39]
Length = 446
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/399 (51%), Positives = 278/399 (69%), Gaps = 4/399 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++IR+ALL+ADV+ + F V E+A+G+ ++ V P Q L K++ DEL LMGGEV
Sbjct: 31 MKEIRKALLDADVNYKTAKSFTDDVKEKALGLNVLTAVSPGQLLTKVMNDELTALMGGEV 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+E+ K+ PT+IL+AGL G GKTT + KLANYLK +GK +LVAGDVYRPAA+DQL IL
Sbjct: 91 TEIDL-KNNPTIILIAGLNGAGKTTFTGKLANYLKSKGKKPLLVAGDVYRPAAVDQLQIL 149
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+GVPVY P IA +G+ E KK++ +V+I+DTAGRL ID+ MMDE+ VK
Sbjct: 150 GEQIGVPVYANIESKDPVGIALEGIAEGKKQHNNVIIIDTAGRLAIDEQMMDEIAAVKEN 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+L VVDAMTGQ+A FN + TG +LTKLDGD+RGGAALS+K V KPIK
Sbjct: 210 TKPHEILFVVDAMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAALSIKSVVNKPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+ME L+ FYP+RMA RILGMGDV+S VE+AQ+ +++A E+QKKI FDFN
Sbjct: 270 FIGTGEKMEALDVFYPERMASRILGMGDVVSLVERAQQQFDEKEAAELQKKIRKNKFDFN 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF Q + + +MG+M ++GMIPG+ K+ V + + K +EA+I++MT ERE P+
Sbjct: 330 DFYSQIQQIKKMGNMKDLMGMIPGVSKMMK-NVEIEDDAFKNVEAIIQSMTKYERENPDS 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ +S RR R+A+ SG + V++L+ Q MR MK
Sbjct: 389 IQQS--RRARIAKGSGNKVEDVTKLIKQFEDMRKVMKQF 425
>gi|381183946|ref|ZP_09892631.1| signal recognition particle protein [Listeriaceae bacterium TTU
M1-001]
gi|380316157|gb|EIA19591.1| signal recognition particle protein [Listeriaceae bacterium TTU
M1-001]
Length = 452
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/401 (50%), Positives = 298/401 (74%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE++VG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKNFIKTVSERSVGQDVMKSLTPGQQVIKIVQEELTNLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ ++ PTVI++ GLQG GKTT + KLAN L KKQ + +LVA D+YRPAAI QL
Sbjct: 92 SKIAVSEKPPTVIMMVGLQGAGKTTTTGKLANLLRKKQNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK++++D VI+DTAGRL ID+ +M ELK+VK
Sbjct: 152 LGKQLNIPVFSLGDQVSPVEIAKQAIEKAKEEHLDYVIIDTAGRLHIDEELMGELKEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP E+LLVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 VTNPAEILLVVDSMTGQDAVNVAESFNEQLGVTGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + QE EM++K+ +
Sbjct: 272 KFVGMGEKMEALETFHPDRMASRILGMGDVLSLIEKAQVDVDQEKMREMERKMKENSMTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +MG + ++ M+PG GK+ ++ +K L +EA+I++MT E++ P
Sbjct: 332 DDFLEQLGQVKQMGPLDELLKMLPGAGKMKGLDNMQVDDKQLGHIEAIIKSMTKNEKDNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ S RRKR+A+ SG+ Q+V++L+ Q +M+ MK +
Sbjct: 392 DIINAS--RRKRIARGSGRPIQEVNRLLKQFNEMKKMMKQM 430
>gi|69248474|ref|ZP_00604748.1| Signal recognition particle protein [Enterococcus faecium DO]
gi|257878620|ref|ZP_05658273.1| signal recognition particle protein [Enterococcus faecium
1,230,933]
gi|257883120|ref|ZP_05662773.1| signal recognition particle protein [Enterococcus faecium
1,231,502]
gi|257891867|ref|ZP_05671520.1| signal recognition particle protein [Enterococcus faecium
1,231,410]
gi|257894437|ref|ZP_05674090.1| signal recognition particle protein [Enterococcus faecium
1,231,408]
gi|260559333|ref|ZP_05831515.1| signal recognition particle protein [Enterococcus faecium C68]
gi|261208009|ref|ZP_05922687.1| signal recognition particle protein [Enterococcus faecium TC 6]
gi|289566895|ref|ZP_06447302.1| signal recognition particle protein [Enterococcus faecium D344SRF]
gi|293556478|ref|ZP_06675052.1| signal recognition particle protein [Enterococcus faecium E1039]
gi|293563841|ref|ZP_06678274.1| signal recognition particle protein [Enterococcus faecium E1162]
gi|293567270|ref|ZP_06678624.1| signal recognition particle protein [Enterococcus faecium E1071]
gi|294615586|ref|ZP_06695442.1| signal recognition particle protein [Enterococcus faecium E1636]
gi|294619810|ref|ZP_06699200.1| signal recognition particle protein [Enterococcus faecium E1679]
gi|314938080|ref|ZP_07845388.1| signal recognition particle protein [Enterococcus faecium
TX0133a04]
gi|314943602|ref|ZP_07850359.1| signal recognition particle protein [Enterococcus faecium TX0133C]
gi|314949239|ref|ZP_07852588.1| signal recognition particle protein [Enterococcus faecium TX0082]
gi|314952611|ref|ZP_07855603.1| signal recognition particle protein [Enterococcus faecium TX0133A]
gi|314992459|ref|ZP_07857881.1| signal recognition particle protein [Enterococcus faecium TX0133B]
gi|314997379|ref|ZP_07862334.1| signal recognition particle protein [Enterococcus faecium
TX0133a01]
gi|383329196|ref|YP_005355080.1| signal recognition particle protein [Enterococcus faecium Aus0004]
gi|389869023|ref|YP_006376446.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium DO]
gi|406581072|ref|ZP_11056251.1| signal recognition particle protein [Enterococcus sp. GMD4E]
gi|406583326|ref|ZP_11058408.1| signal recognition particle protein [Enterococcus sp. GMD3E]
gi|406585675|ref|ZP_11060654.1| signal recognition particle protein [Enterococcus sp. GMD2E]
gi|406591244|ref|ZP_11065537.1| signal recognition particle protein [Enterococcus sp. GMD1E]
gi|410936498|ref|ZP_11368363.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus sp. GMD5E]
gi|415894168|ref|ZP_11550289.1| signal recognition particle protein [Enterococcus faecium E4453]
gi|416142609|ref|ZP_11599613.1| signal recognition particle protein [Enterococcus faecium E4452]
gi|424780120|ref|ZP_18207001.1| signal recognition particle protein [Enterococcus faecium V689]
gi|424802491|ref|ZP_18228004.1| signal recognition particle protein [Enterococcus faecium S447]
gi|424850064|ref|ZP_18274479.1| signal recognition particle protein [Enterococcus faecium R501]
gi|424857588|ref|ZP_18281718.1| signal recognition particle protein [Enterococcus faecium R499]
gi|424907911|ref|ZP_18331345.1| signal recognition particle protein [Enterococcus faecium R497]
gi|424951324|ref|ZP_18366439.1| signal recognition particle protein [Enterococcus faecium R496]
gi|424953399|ref|ZP_18368365.1| signal recognition particle protein [Enterococcus faecium R494]
gi|424958870|ref|ZP_18373490.1| signal recognition particle protein [Enterococcus faecium R446]
gi|424962238|ref|ZP_18376608.1| signal recognition particle protein [Enterococcus faecium P1986]
gi|424962648|ref|ZP_18376966.1| signal recognition particle protein [Enterococcus faecium P1190]
gi|424968649|ref|ZP_18382259.1| signal recognition particle protein [Enterococcus faecium P1140]
gi|424972691|ref|ZP_18386013.1| signal recognition particle protein [Enterococcus faecium P1139]
gi|424975462|ref|ZP_18388619.1| signal recognition particle protein [Enterococcus faecium P1137]
gi|424978927|ref|ZP_18391807.1| signal recognition particle protein [Enterococcus faecium P1123]
gi|424980489|ref|ZP_18393283.1| signal recognition particle protein [Enterococcus faecium ERV99]
gi|424985230|ref|ZP_18397718.1| signal recognition particle protein [Enterococcus faecium ERV69]
gi|424988719|ref|ZP_18401022.1| signal recognition particle protein [Enterococcus faecium ERV38]
gi|424992574|ref|ZP_18404627.1| signal recognition particle protein [Enterococcus faecium ERV26]
gi|424996450|ref|ZP_18408257.1| signal recognition particle protein [Enterococcus faecium ERV168]
gi|424999108|ref|ZP_18410749.1| signal recognition particle protein [Enterococcus faecium ERV165]
gi|424999881|ref|ZP_18411474.1| signal recognition particle protein [Enterococcus faecium ERV161]
gi|425006151|ref|ZP_18417344.1| signal recognition particle protein [Enterococcus faecium ERV102]
gi|425009463|ref|ZP_18420482.1| signal recognition particle protein [Enterococcus faecium ERV1]
gi|425012624|ref|ZP_18423426.1| signal recognition particle protein [Enterococcus faecium E422]
gi|425015748|ref|ZP_18426339.1| signal recognition particle protein [Enterococcus faecium E417]
gi|425019469|ref|ZP_18429832.1| signal recognition particle protein [Enterococcus faecium C621]
gi|425020205|ref|ZP_18430524.1| signal recognition particle protein [Enterococcus faecium C497]
gi|425023133|ref|ZP_18433270.1| signal recognition particle protein [Enterococcus faecium C1904]
gi|425035379|ref|ZP_18440220.1| signal recognition particle protein [Enterococcus faecium 514]
gi|425040142|ref|ZP_18444628.1| signal recognition particle protein [Enterococcus faecium 513]
gi|425043894|ref|ZP_18448093.1| signal recognition particle protein [Enterococcus faecium 511]
gi|425045035|ref|ZP_18449158.1| signal recognition particle protein [Enterococcus faecium 510]
gi|425050560|ref|ZP_18454293.1| signal recognition particle protein [Enterococcus faecium 509]
gi|425051000|ref|ZP_18454694.1| signal recognition particle protein [Enterococcus faecium 506]
gi|425055763|ref|ZP_18459232.1| signal recognition particle protein [Enterococcus faecium 505]
gi|425058389|ref|ZP_18461771.1| signal recognition particle protein [Enterococcus faecium 504]
gi|425062030|ref|ZP_18465213.1| signal recognition particle protein [Enterococcus faecium 503]
gi|427396388|ref|ZP_18889147.1| signal recognition particle protein [Enterococcus durans
FB129-CNAB-4]
gi|430819711|ref|ZP_19438357.1| signal recognition particle protein [Enterococcus faecium E0045]
gi|430822757|ref|ZP_19441332.1| signal recognition particle protein [Enterococcus faecium E0120]
gi|430825710|ref|ZP_19443912.1| signal recognition particle protein [Enterococcus faecium E0164]
gi|430827813|ref|ZP_19445944.1| signal recognition particle protein [Enterococcus faecium E0269]
gi|430830914|ref|ZP_19448970.1| signal recognition particle protein [Enterococcus faecium E0333]
gi|430832888|ref|ZP_19450904.1| signal recognition particle protein [Enterococcus faecium E0679]
gi|430837718|ref|ZP_19455678.1| signal recognition particle protein [Enterococcus faecium E0680]
gi|430838321|ref|ZP_19456268.1| signal recognition particle protein [Enterococcus faecium E0688]
gi|430843828|ref|ZP_19461727.1| signal recognition particle protein [Enterococcus faecium E1050]
gi|430848123|ref|ZP_19465953.1| signal recognition particle protein [Enterococcus faecium E1133]
gi|430849397|ref|ZP_19467177.1| signal recognition particle protein [Enterococcus faecium E1185]
gi|430857923|ref|ZP_19475554.1| signal recognition particle protein [Enterococcus faecium E1552]
gi|430860428|ref|ZP_19478028.1| signal recognition particle protein [Enterococcus faecium E1573]
gi|430865375|ref|ZP_19481073.1| signal recognition particle protein [Enterococcus faecium E1574]
gi|430876823|ref|ZP_19483925.1| signal recognition particle protein [Enterococcus faecium E1575]
gi|430948278|ref|ZP_19485867.1| signal recognition particle protein [Enterococcus faecium E1576]
gi|431003805|ref|ZP_19488903.1| signal recognition particle protein [Enterococcus faecium E1578]
gi|431147517|ref|ZP_19499227.1| signal recognition particle protein [Enterococcus faecium E1620]
gi|431230043|ref|ZP_19502246.1| signal recognition particle protein [Enterococcus faecium E1622]
gi|431252112|ref|ZP_19504170.1| signal recognition particle protein [Enterococcus faecium E1623]
gi|431373172|ref|ZP_19510081.1| signal recognition particle protein [Enterococcus faecium E1627]
gi|431413391|ref|ZP_19512150.1| signal recognition particle protein [Enterococcus faecium E1630]
gi|431497436|ref|ZP_19514590.1| signal recognition particle protein [Enterococcus faecium E1634]
gi|431542316|ref|ZP_19518344.1| signal recognition particle protein [Enterococcus faecium E1731]
gi|431730890|ref|ZP_19525566.1| signal recognition particle protein [Enterococcus faecium E1904]
gi|431742899|ref|ZP_19531782.1| signal recognition particle protein [Enterococcus faecium E2071]
gi|431746433|ref|ZP_19535259.1| signal recognition particle protein [Enterococcus faecium E2134]
gi|431750302|ref|ZP_19539022.1| signal recognition particle protein [Enterococcus faecium E2297]
gi|431755033|ref|ZP_19543691.1| signal recognition particle protein [Enterococcus faecium E2883]
gi|431759542|ref|ZP_19548154.1| signal recognition particle protein [Enterococcus faecium E3346]
gi|431764354|ref|ZP_19552897.1| signal recognition particle protein [Enterococcus faecium E4215]
gi|431767459|ref|ZP_19555911.1| signal recognition particle protein [Enterococcus faecium E1321]
gi|431780833|ref|ZP_19568998.1| signal recognition particle protein [Enterococcus faecium E4389]
gi|431781698|ref|ZP_19569842.1| signal recognition particle protein [Enterococcus faecium E6012]
gi|431785919|ref|ZP_19573940.1| signal recognition particle protein [Enterococcus faecium E6045]
gi|447912364|ref|YP_007393776.1| Signal recognition particle, subunit Ffh SRP54 [Enterococcus
faecium NRRL B-2354]
gi|68194411|gb|EAN08916.1| Signal recognition particle protein [Enterococcus faecium DO]
gi|257812848|gb|EEV41606.1| signal recognition particle protein [Enterococcus faecium
1,230,933]
gi|257818778|gb|EEV46106.1| signal recognition particle protein [Enterococcus faecium
1,231,502]
gi|257828227|gb|EEV54853.1| signal recognition particle protein [Enterococcus faecium
1,231,410]
gi|257830816|gb|EEV57423.1| signal recognition particle protein [Enterococcus faecium
1,231,408]
gi|260074693|gb|EEW63013.1| signal recognition particle protein [Enterococcus faecium C68]
gi|260077767|gb|EEW65480.1| signal recognition particle protein [Enterococcus faecium TC 6]
gi|289161301|gb|EFD09194.1| signal recognition particle protein [Enterococcus faecium D344SRF]
gi|291590019|gb|EFF21813.1| signal recognition particle protein [Enterococcus faecium E1071]
gi|291591529|gb|EFF23182.1| signal recognition particle protein [Enterococcus faecium E1636]
gi|291593943|gb|EFF25427.1| signal recognition particle protein [Enterococcus faecium E1679]
gi|291601357|gb|EFF31635.1| signal recognition particle protein [Enterococcus faecium E1039]
gi|291604211|gb|EFF33712.1| signal recognition particle protein [Enterococcus faecium E1162]
gi|313588547|gb|EFR67392.1| signal recognition particle protein [Enterococcus faecium
TX0133a01]
gi|313593001|gb|EFR71846.1| signal recognition particle protein [Enterococcus faecium TX0133B]
gi|313595279|gb|EFR74124.1| signal recognition particle protein [Enterococcus faecium TX0133A]
gi|313597720|gb|EFR76565.1| signal recognition particle protein [Enterococcus faecium TX0133C]
gi|313642569|gb|EFS07149.1| signal recognition particle protein [Enterococcus faecium
TX0133a04]
gi|313644380|gb|EFS08960.1| signal recognition particle protein [Enterococcus faecium TX0082]
gi|364089611|gb|EHM32283.1| signal recognition particle protein [Enterococcus faecium E4452]
gi|364092330|gb|EHM34712.1| signal recognition particle protein [Enterococcus faecium E4453]
gi|378938890|gb|AFC63962.1| signal recognition particle protein [Enterococcus faecium Aus0004]
gi|388534272|gb|AFK59464.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium DO]
gi|402916210|gb|EJX37106.1| signal recognition particle protein [Enterococcus faecium R501]
gi|402919953|gb|EJX40511.1| signal recognition particle protein [Enterococcus faecium S447]
gi|402924607|gb|EJX44804.1| signal recognition particle protein [Enterococcus faecium V689]
gi|402928616|gb|EJX48462.1| signal recognition particle protein [Enterococcus faecium R499]
gi|402929375|gb|EJX49141.1| signal recognition particle protein [Enterococcus faecium R497]
gi|402930680|gb|EJX50312.1| signal recognition particle protein [Enterococcus faecium R496]
gi|402938666|gb|EJX57652.1| signal recognition particle protein [Enterococcus faecium R446]
gi|402939172|gb|EJX58110.1| signal recognition particle protein [Enterococcus faecium R494]
gi|402941446|gb|EJX60175.1| signal recognition particle protein [Enterococcus faecium P1986]
gi|402951133|gb|EJX69084.1| signal recognition particle protein [Enterococcus faecium P1140]
gi|402951484|gb|EJX69407.1| signal recognition particle protein [Enterococcus faecium P1190]
gi|402952859|gb|EJX70629.1| signal recognition particle protein [Enterococcus faecium P1139]
gi|402953431|gb|EJX71149.1| signal recognition particle protein [Enterococcus faecium P1137]
gi|402959911|gb|EJX77113.1| signal recognition particle protein [Enterococcus faecium P1123]
gi|402966338|gb|EJX82977.1| signal recognition particle protein [Enterococcus faecium ERV69]
gi|402966421|gb|EJX83049.1| signal recognition particle protein [Enterococcus faecium ERV99]
gi|402971075|gb|EJX87376.1| signal recognition particle protein [Enterococcus faecium ERV38]
gi|402972744|gb|EJX88923.1| signal recognition particle protein [Enterococcus faecium ERV26]
gi|402973572|gb|EJX89685.1| signal recognition particle protein [Enterococcus faecium ERV168]
gi|402980395|gb|EJX96006.1| signal recognition particle protein [Enterococcus faecium ERV165]
gi|402984170|gb|EJX99494.1| signal recognition particle protein [Enterococcus faecium ERV102]
gi|402989128|gb|EJY04080.1| signal recognition particle protein [Enterococcus faecium ERV1]
gi|402990604|gb|EJY05473.1| signal recognition particle protein [Enterococcus faecium ERV161]
gi|402992577|gb|EJY07267.1| signal recognition particle protein [Enterococcus faecium E422]
gi|402994145|gb|EJY08702.1| signal recognition particle protein [Enterococcus faecium E417]
gi|402997904|gb|EJY12200.1| signal recognition particle protein [Enterococcus faecium C621]
gi|403009720|gb|EJY23146.1| signal recognition particle protein [Enterococcus faecium C497]
gi|403010704|gb|EJY24057.1| signal recognition particle protein [Enterococcus faecium C1904]
gi|403013586|gb|EJY26670.1| signal recognition particle protein [Enterococcus faecium 513]
gi|403017560|gb|EJY30299.1| signal recognition particle protein [Enterococcus faecium 511]
gi|403018194|gb|EJY30891.1| signal recognition particle protein [Enterococcus faecium 514]
gi|403023055|gb|EJY35348.1| signal recognition particle protein [Enterococcus faecium 509]
gi|403028037|gb|EJY39881.1| signal recognition particle protein [Enterococcus faecium 510]
gi|403033144|gb|EJY44663.1| signal recognition particle protein [Enterococcus faecium 505]
gi|403038537|gb|EJY49749.1| signal recognition particle protein [Enterococcus faecium 504]
gi|403039030|gb|EJY50209.1| signal recognition particle protein [Enterococcus faecium 506]
gi|403039670|gb|EJY50804.1| signal recognition particle protein [Enterococcus faecium 503]
gi|404453120|gb|EKA00214.1| signal recognition particle protein [Enterococcus sp. GMD4E]
gi|404456877|gb|EKA03486.1| signal recognition particle protein [Enterococcus sp. GMD3E]
gi|404462274|gb|EKA08055.1| signal recognition particle protein [Enterococcus sp. GMD2E]
gi|404468030|gb|EKA13066.1| signal recognition particle protein [Enterococcus sp. GMD1E]
gi|410735141|gb|EKQ77057.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus sp. GMD5E]
gi|425723058|gb|EKU85949.1| signal recognition particle protein [Enterococcus durans
FB129-CNAB-4]
gi|430440303|gb|ELA50571.1| signal recognition particle protein [Enterococcus faecium E0045]
gi|430442686|gb|ELA52707.1| signal recognition particle protein [Enterococcus faecium E0120]
gi|430445868|gb|ELA55581.1| signal recognition particle protein [Enterococcus faecium E0164]
gi|430482503|gb|ELA59621.1| signal recognition particle protein [Enterococcus faecium E0333]
gi|430484159|gb|ELA61189.1| signal recognition particle protein [Enterococcus faecium E0269]
gi|430486938|gb|ELA63767.1| signal recognition particle protein [Enterococcus faecium E0679]
gi|430487045|gb|ELA63824.1| signal recognition particle protein [Enterococcus faecium E0680]
gi|430491916|gb|ELA68365.1| signal recognition particle protein [Enterococcus faecium E0688]
gi|430497687|gb|ELA73724.1| signal recognition particle protein [Enterococcus faecium E1050]
gi|430535954|gb|ELA76342.1| signal recognition particle protein [Enterococcus faecium E1133]
gi|430537855|gb|ELA78169.1| signal recognition particle protein [Enterococcus faecium E1185]
gi|430546403|gb|ELA86362.1| signal recognition particle protein [Enterococcus faecium E1552]
gi|430552087|gb|ELA91833.1| signal recognition particle protein [Enterococcus faecium E1573]
gi|430553028|gb|ELA92741.1| signal recognition particle protein [Enterococcus faecium E1574]
gi|430557495|gb|ELA96952.1| signal recognition particle protein [Enterococcus faecium E1575]
gi|430558051|gb|ELA97483.1| signal recognition particle protein [Enterococcus faecium E1576]
gi|430561894|gb|ELB01148.1| signal recognition particle protein [Enterococcus faecium E1578]
gi|430574029|gb|ELB12807.1| signal recognition particle protein [Enterococcus faecium E1622]
gi|430575641|gb|ELB14346.1| signal recognition particle protein [Enterococcus faecium E1620]
gi|430578538|gb|ELB17090.1| signal recognition particle protein [Enterococcus faecium E1623]
gi|430583317|gb|ELB21701.1| signal recognition particle protein [Enterococcus faecium E1627]
gi|430588371|gb|ELB26563.1| signal recognition particle protein [Enterococcus faecium E1634]
gi|430589299|gb|ELB27437.1| signal recognition particle protein [Enterococcus faecium E1630]
gi|430592880|gb|ELB30881.1| signal recognition particle protein [Enterococcus faecium E1731]
gi|430595449|gb|ELB33352.1| signal recognition particle protein [Enterococcus faecium E1904]
gi|430607562|gb|ELB44874.1| signal recognition particle protein [Enterococcus faecium E2071]
gi|430608667|gb|ELB45906.1| signal recognition particle protein [Enterococcus faecium E2134]
gi|430609840|gb|ELB47013.1| signal recognition particle protein [Enterococcus faecium E2297]
gi|430618019|gb|ELB54876.1| signal recognition particle protein [Enterococcus faecium E2883]
gi|430625942|gb|ELB62541.1| signal recognition particle protein [Enterococcus faecium E3346]
gi|430630973|gb|ELB67311.1| signal recognition particle protein [Enterococcus faecium E1321]
gi|430631539|gb|ELB67861.1| signal recognition particle protein [Enterococcus faecium E4215]
gi|430638743|gb|ELB74653.1| signal recognition particle protein [Enterococcus faecium E4389]
gi|430646636|gb|ELB82107.1| signal recognition particle protein [Enterococcus faecium E6045]
gi|430648916|gb|ELB84305.1| signal recognition particle protein [Enterococcus faecium E6012]
gi|445188073|gb|AGE29715.1| Signal recognition particle, subunit Ffh SRP54 [Enterococcus
faecium NRRL B-2354]
Length = 472
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/401 (51%), Positives = 291/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+AVG ++ + P QQ+VKIV +EL +G E
Sbjct: 32 MREIRLALLEADVNLQVVKDFTKRVRERAVGAEVLESLSPAQQIVKIVDEELTITLGSET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
+EL + PTVI++AGLQG GKTT + KLANYLKK + +L+AGDVYRPAAIDQL +
Sbjct: 92 AELNKSPKIPTVIMMAGLQGAGKTTFTGKLANYLKKNENARPLLIAGDVYRPAAIDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GTEV P +I +QG+E AK+K D V++DTAGRL ID+ +MDELK +K
Sbjct: 152 LGQQLDVPVFDMGTEVSPVEIVRQGMELAKEKKNDYVLIDTAGRLHIDETLMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAALS++ V+G PI
Sbjct: 212 LTQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAALSIRSVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE++ DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+ +K+ +FDF
Sbjct: 272 KFIGSGEKLTDLEVFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELAQKMRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF++Q V MG + +I MIPGM ++ + V+ K ++ +AM+ +MTP ER P
Sbjct: 332 NDFIEQLDQVMGMGPLEDLIKMIPGMNQVPGIENVKVDPKDVERKKAMVYSMTPAERANP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 392 DLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|325955366|ref|YP_004239026.1| signal recognition particle protein [Weeksella virosa DSM 16922]
gi|323437984|gb|ADX68448.1| signal recognition particle protein [Weeksella virosa DSM 16922]
Length = 458
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/398 (52%), Positives = 281/398 (70%), Gaps = 5/398 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRAL++ADVS V + F V + A+G ++ + P Q +VKIV DELVKLMGGE
Sbjct: 31 VKEVRRALVDADVSYKVAKEFTDTVRKNAIGENVLTSLNPSQLMVKIVHDELVKLMGGEH 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
SEL + + PT+IL+AGLQG GKTT S KLANYLK K+ K +LVAGDVYRPAAI+QL +
Sbjct: 91 SELTIS-ANPTIILIAGLQGSGKTTFSGKLANYLKTKKNKKPLLVAGDVYRPAAINQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+GV VY P +IA++ + AK+ +V+I+DTAGRL +D+ MMDE++ V
Sbjct: 150 LGEQIGVEVYAEEENKNPVEIAEKAIAYAKQNGNNVIILDTAGRLAVDQEMMDEIRRVHA 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
NPTE L VVD+MTGQ+A FN + +G +LTKLDGD+RGGAAL++K V KPI
Sbjct: 210 ATNPTETLFVVDSMTGQDAVNTARAFNDVLDYSGVVLTKLDGDTRGGAALTIKTVVDKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+ME L+ FYP RMA RILGMGDV+S VE+AQE +E+A +QKKI NFDF
Sbjct: 270 KFISTGEKMEALDLFYPSRMADRILGMGDVVSLVERAQEQFDEEEARRLQKKIAKNNFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFLKQ + + RMG+M ++GMIPG GK V + + K +EA+I +MTP+ER+ P+
Sbjct: 330 DDFLKQIQQIKRMGNMKDLVGMIPGAGKALK-DVEINDDAFKGVEAIIHSMTPQERKNPK 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
++ S R+ R+A+ SG + Q+V+QL+ Q +M MK
Sbjct: 389 IIDNS--RKNRIAKGSGTSIQEVNQLLKQFSEMGKMMK 424
>gi|227551902|ref|ZP_03981951.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium
TX1330]
gi|257884147|ref|ZP_05663800.1| signal recognition particle protein [Enterococcus faecium
1,231,501]
gi|257886935|ref|ZP_05666588.1| signal recognition particle protein [Enterococcus faecium
1,141,733]
gi|257895507|ref|ZP_05675160.1| signal recognition particle protein [Enterococcus faecium Com12]
gi|257898122|ref|ZP_05677775.1| signal recognition particle protein [Enterococcus faecium Com15]
gi|293378372|ref|ZP_06624541.1| signal recognition particle protein [Enterococcus faecium PC4.1]
gi|293571524|ref|ZP_06682547.1| signal recognition particle protein [Enterococcus faecium E980]
gi|424766376|ref|ZP_18193729.1| signal recognition particle protein [Enterococcus faecium TX1337RF]
gi|430841665|ref|ZP_19459584.1| signal recognition particle protein [Enterococcus faecium E1007]
gi|430851902|ref|ZP_19469637.1| signal recognition particle protein [Enterococcus faecium E1258]
gi|430855109|ref|ZP_19472820.1| signal recognition particle protein [Enterococcus faecium E1392]
gi|431033237|ref|ZP_19491083.1| signal recognition particle protein [Enterococcus faecium E1590]
gi|431076960|ref|ZP_19494996.1| signal recognition particle protein [Enterococcus faecium E1604]
gi|431108321|ref|ZP_19497472.1| signal recognition particle protein [Enterococcus faecium E1613]
gi|431586239|ref|ZP_19520754.1| signal recognition particle protein [Enterococcus faecium E1861]
gi|431737188|ref|ZP_19526142.1| signal recognition particle protein [Enterococcus faecium E1972]
gi|431739675|ref|ZP_19528595.1| signal recognition particle protein [Enterococcus faecium E2039]
gi|431752200|ref|ZP_19540884.1| signal recognition particle protein [Enterococcus faecium E2620]
gi|431757047|ref|ZP_19545678.1| signal recognition particle protein [Enterococcus faecium E3083]
gi|431762305|ref|ZP_19550867.1| signal recognition particle protein [Enterococcus faecium E3548]
gi|227178974|gb|EEI59946.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium
TX1330]
gi|257819985|gb|EEV47133.1| signal recognition particle protein [Enterococcus faecium
1,231,501]
gi|257822989|gb|EEV49921.1| signal recognition particle protein [Enterococcus faecium
1,141,733]
gi|257832072|gb|EEV58493.1| signal recognition particle protein [Enterococcus faecium Com12]
gi|257836034|gb|EEV61108.1| signal recognition particle protein [Enterococcus faecium Com15]
gi|291608390|gb|EFF37689.1| signal recognition particle protein [Enterococcus faecium E980]
gi|292643236|gb|EFF61377.1| signal recognition particle protein [Enterococcus faecium PC4.1]
gi|402410897|gb|EJV43285.1| signal recognition particle protein [Enterococcus faecium TX1337RF]
gi|430494441|gb|ELA70691.1| signal recognition particle protein [Enterococcus faecium E1007]
gi|430542484|gb|ELA82592.1| signal recognition particle protein [Enterococcus faecium E1258]
gi|430547647|gb|ELA87570.1| signal recognition particle protein [Enterococcus faecium E1392]
gi|430564338|gb|ELB03522.1| signal recognition particle protein [Enterococcus faecium E1590]
gi|430566415|gb|ELB05528.1| signal recognition particle protein [Enterococcus faecium E1604]
gi|430569445|gb|ELB08449.1| signal recognition particle protein [Enterococcus faecium E1613]
gi|430593417|gb|ELB31403.1| signal recognition particle protein [Enterococcus faecium E1861]
gi|430598845|gb|ELB36561.1| signal recognition particle protein [Enterococcus faecium E1972]
gi|430604291|gb|ELB41782.1| signal recognition particle protein [Enterococcus faecium E2039]
gi|430614124|gb|ELB51117.1| signal recognition particle protein [Enterococcus faecium E2620]
gi|430619336|gb|ELB56163.1| signal recognition particle protein [Enterococcus faecium E3083]
gi|430624997|gb|ELB61647.1| signal recognition particle protein [Enterococcus faecium E3548]
Length = 472
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/401 (51%), Positives = 291/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+AVG ++ + P QQ+VKIV +EL +G E
Sbjct: 32 MREIRLALLEADVNLQVVKDFTKRVRERAVGAEVLESLSPAQQIVKIVDEELTITLGSET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
+EL + PTVI++AGLQG GKTT + KLANYLKK + +L+AGDVYRPAAIDQL +
Sbjct: 92 AELNKSPKIPTVIMMAGLQGAGKTTFTGKLANYLKKNENARPLLIAGDVYRPAAIDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GTEV P +I +QG+E A++K D V++DTAGRL ID+ +MDELK +K
Sbjct: 152 LGQQLDVPVFDMGTEVSPVEIVRQGMELAREKKNDYVLIDTAGRLHIDETLMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAALS++ V+G PI
Sbjct: 212 LTQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAALSIRSVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE++ DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+ +K+ +FDF
Sbjct: 272 KFIGSGEKLTDLEVFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELAQKMRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF++Q V MG + +I MIPGM ++ + V+ K ++ +AM+ +MTP ER P
Sbjct: 332 NDFIEQLDQVMGMGPLEDLIKMIPGMNQVPGIENVKVDPKDVERKKAMVYSMTPAERANP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 392 DLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|163790804|ref|ZP_02185229.1| signal recognition particle protein [Carnobacterium sp. AT7]
gi|159873872|gb|EDP67951.1| signal recognition particle protein [Carnobacterium sp. AT7]
Length = 437
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/410 (49%), Positives = 296/410 (72%), Gaps = 8/410 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VS +AVG ++ + P QQ++KIV +EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKTVSARAVGAEVLESLSPGQQIIKIVSEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
+ + A PTV+++ GLQG GKTT + KLA+YL+K Q K +LVA D+YRPAAI QL
Sbjct: 92 ATIQTAAKAPTVVMMVGLQGAGKTTTAGKLASYLRKNQNKRPLLVAADIYRPAAIQQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV++ G +V P +IA+QG+E+AK +++D V++DTAGRLQID+ +M EL D+K
Sbjct: 152 IGKQLDVPVFSMGDQVSPVEIARQGIEKAKAEHLDFVLIDTAGRLQIDETLMQELSDIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
PTE+ LVVDAMTGQEAA + +F+ ++ ITG ILTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 TTQPTEIFLVVDAMTGQEAANVAASFDEQLDITGVILTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPFYPDRMA RILGMGD+L+ +EKAQ+ ++ +EEM K+ +FDF
Sbjct: 272 KFTGSGEKLDALEPFYPDRMANRILGMGDMLTLIEKAQQDFDEKKSEEMITKLRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPEEREKP 358
NDF++Q V+ MG + ++ MIPGM + + + K M+A++ +MTP+ERE P
Sbjct: 332 NDFIEQMDQVSNMGPIEDILKMIPGMNNVPGLDKLQIDPKDTARMKAIVLSMTPQERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 408
++L++S RR+R+A+ S + +V++++ Q + K +M M G++
Sbjct: 392 DILSQS--RRRRIARGSARPIAEVNRMIKQFNE----SKKMMSQMSKGNM 435
>gi|366162322|ref|ZP_09462077.1| signal recognition particle protein [Acetivibrio cellulolyticus
CD2]
Length = 450
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/388 (52%), Positives = 281/388 (72%), Gaps = 4/388 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+I+ ALLEADV+ VV+ F+ VSE+AVG ++ + P QQ++KIV +EL+ LMG
Sbjct: 32 MREIKLALLEADVNFKVVKDFIAKVSERAVGQDVLESLTPGQQIIKIVHEELINLMGPGQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++VFA PTV ++ GLQG GKTT S KLAN L+KQGK+ +LVA DVYRPAAI QL ++
Sbjct: 92 SKVVFAPKPPTVYMMVGLQGSGKTTTSGKLANLLRKQGKNPLLVACDVYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+GV V++ G + P IAK +E AK K D+VI+DTAGRL ID+ +MDELK++K
Sbjct: 152 GGQLGVDVFSMGDQTNPVDIAKAAVEHAKIKQYDLVIIDTAGRLHIDEKLMDELKNIKDT 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + TFN ++G+ G ILTKLDGD+RGGAALSVK V+GKPIK
Sbjct: 212 VRPHEILLVVDSMTGQDAVNVSETFNEKLGVDGVILTKLDGDTRGGAALSVKTVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ DLEPF+PDRMA RILGMGDVLS +EKAQE ++ A EM++K+ + F
Sbjct: 272 FIGMGEKLSDLEPFFPDRMASRILGMGDVLSLIEKAQEAFDEKAALEMERKMRTQQFTLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA--EKSLKIMEAMIEAMTPEEREKP 358
DFL Q + + +MG +++++GM+PG+ ++ A +K L EA+I +MT +ER P
Sbjct: 332 DFLDQMQQIKKMGPLNKIVGMLPGVNADALKEINSADSDKELGRFEAIIRSMTKKERNDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLV 386
++ S RRKR+A SG T Q V++++
Sbjct: 392 SIINGS--RRKRIAAGSGTTVQDVNKVL 417
>gi|452995947|emb|CCQ92348.1| signal recognition particle-like (SRP) GTPase [Clostridium
ultunense Esp]
Length = 446
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/400 (50%), Positives = 294/400 (73%), Gaps = 5/400 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ + V E+AVG+ +++ + P QQ++K+V +EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDLIARVKERAVGIEVLKTLNPAQQVIKVVNEELTALMGGEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVI 119
+ L K P VI++ GLQG GKTT + KLA +LKKQ GK +LVA DVYRPAAI QL +
Sbjct: 92 ARLELGKKPPAVIMMVGLQGAGKTTTTGKLALHLKKQQGKRSLLVACDVYRPAAIKQLQV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGE +G+PV++ GTEV P +IA+QGLE+A+++++DVVI+DTAGRL +D+ +M ELK++K
Sbjct: 152 LGESIGLPVFSMGTEVSPVEIARQGLEKAREEHLDVVIIDTAGRLHVDERLMVELKEIKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E+LLVVDAMTGQ+A + +F+ ++ +TG +LTKLDGD+RGGAALSVK V+G PI
Sbjct: 212 QVHPQEILLVVDAMTGQDAVTVAESFHQQLDLTGVVLTKLDGDTRGGAALSVKAVTGCPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K GE++E LEPFYPDRMA RILGMGDVL+ +EKAQ + E A+E+++K+ A F
Sbjct: 272 KFAAMGEKLEALEPFYPDRMASRILGMGDVLTLIEKAQAEVDAEKAKELERKLRKAEFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V ++G + ++ MIPGM ++ ++ EK + +EA+I++MT +E++ P+
Sbjct: 332 EDFLEQMEQVRKLGPLEDLLAMIPGMNRLKDLKI--DEKQIAHVEAIIKSMTRQEKQNPQ 389
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ S RRKR+AQ SG + +V++L+ Q + + MK L
Sbjct: 390 IINYS--RRKRIAQGSGTSLTEVNRLLKQFEETKKMMKQL 427
>gi|34763935|ref|ZP_00144833.1| SIGNAL RECOGNITION PARTICLE, SUBUNIT FFH/SRP54 [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|27886292|gb|EAA23570.1| SIGNAL RECOGNITION PARTICLE, SUBUNIT FFH/SRP54 [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
Length = 444
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/417 (49%), Positives = 294/417 (70%), Gaps = 12/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ +LLEADV+ VV+ F +SE+A+G +IRG+ P QQ +K+V DELV+L+GG
Sbjct: 31 LREVKMSLLEADVNYKVVKDFTNKISEKAIGTEVIRGINPAQQFIKLVNDELVELLGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L PT+I+LAGLQG GKTT +AKLA +LKKQ + +LV DVYRPAAI QL +L
Sbjct: 91 SKLTKGLRNPTIIMLAGLQGAGKTTFAAKLAKFLKKQNEKLLLVGVDVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+GV VY+ IA + +E+AK+ N +IVDTAGRL ID+ +M+ELK++KR
Sbjct: 151 GQQIGVDVYSEEDTKDVVGIATRAIEKAKEINATYMIVDTAGRLHIDETLMEELKELKRA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQ+A L +FN + + G ILTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 IKPQEILLVVDAMIGQDAVNLAESFNNALSVDGVILTKLDGDTRGGAALSIKAVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E F+PDR+ ILGMGDV+S VEKAQEV+ + +A+ +++KI S FD N
Sbjct: 271 FIGVGEKLNDIEIFHPDRLVSGILGMGDVVSLVEKAQEVIDENEAKSLEEKIKSQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ +T+ R+GS+ ++ +IPG+ KI + AEK +K +EA+I++MT EER+KP++
Sbjct: 331 DFLKQLQTIKRLGSLGGILKLIPGIPKID--DLAPAEKEMKKVEAIIQSMTKEERKKPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGSLP 409
L S R+ R+A+ SG V++L+ Q QM+ MK N+ + +GG P
Sbjct: 389 LKAS--RKIRIAKGSGTDVSDVNKLLKQFEQMKSMMKMFSSGKMPNIGAMGKGGKFP 443
>gi|392426862|ref|YP_006467856.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfosporosinus acidiphilus SJ4]
gi|391356825|gb|AFM42524.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfosporosinus acidiphilus SJ4]
Length = 452
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/401 (52%), Positives = 286/401 (71%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+ +G ++ + P QQ++KIV +E++ LMGG
Sbjct: 31 MREVRVALLEADVNFKVVKDFVAKVKERCIGQDVLESLSPAQQVIKIVHEEMIDLMGGAT 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+++ A PTVILL GLQG GKTT +AKLAN LKKQGK +LVA D+YRPAAI QL +L
Sbjct: 91 GKILVAPKPPTVILLLGLQGAGKTTHAAKLANMLKKQGKHPLLVACDIYRPAAIKQLEVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV++ G E P+ IA L+ A + DVVI+DTAGRL I++ +MDEL+ +K
Sbjct: 151 GEQIKVPVFSMGQE-PPADIALASLKHAYQNGQDVVIIDTAGRLHINEELMDELRAIKTT 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +F+ EIG+ G ILTKLDGD+RGGAALS+K V+G IK
Sbjct: 210 VKPHEILLVVDAMTGQDAVNVAESFHKEIGLDGVILTKLDGDTRGGAALSIKAVTGCTIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+M+ LEPF+PDRMA RILGMGDVL+ +EKAQE Q+ A+EM++K+ F +
Sbjct: 270 FAGTGEKMDALEPFHPDRMASRILGMGDVLTLIEKAQESFDQKKAKEMEQKLRKQEFTLD 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG +S ++ MIPG+GK V+ EK +EA+I +MT EER KP L
Sbjct: 330 DFLDQMQQMKKMGPLSSLLEMIPGVGK-QLKDVKIDEKDTAHIEAIIRSMTLEERRKPAL 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+ +S R+KR+A+ SG + Q+V +L+ Q QM+ MK L G
Sbjct: 389 IKDS--RKKRIAKGSGTSVQEVGRLLKQFEQMQKMMKQLTG 427
>gi|433655070|ref|YP_007298778.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293259|gb|AGB19081.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 446
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/399 (49%), Positives = 282/399 (70%), Gaps = 2/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++++ ALLEADV+ VV+ F+ V+E+++G ++ + P Q ++KIV DEL LMG +
Sbjct: 32 MKEVKIALLEADVNFKVVKEFINTVTEKSLGQEVMESLTPAQHVIKIVNDELTALMGSKE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ F+ PT+I++ GLQG GKTT S KLANYLK +GK+ +LVA D+YRPAAI QL ++
Sbjct: 92 SKINFSDKPPTIIMMVGLQGSGKTTTSGKLANYLKSKGKNPILVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G + VPV++ G + P IAK ++ AK N +VVI+DTAGRL ID+ +MDELK++K
Sbjct: 152 GSSINVPVFSMGDKTTPVDIAKGAVDFAKNNNYNVVIIDTAGRLHIDEELMDELKNIKDA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+LLVVDAMTGQ+ + +FN ++ I G ILTKLDGD+RGGAALSVK V+ KPIK
Sbjct: 212 VNPNEILLVVDAMTGQDVVNVAESFNEKLDIDGVILTKLDGDTRGGAALSVKAVTHKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+ GE++ D+E F+PDRMA RILGMGDVLS +EKAQ + ++ A E+QKKI+ F F+
Sbjct: 272 FIASGEKLTDIEVFHPDRMASRILGMGDVLSLIEKAQSQIDEKKALELQKKILEQQFSFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q + + MG + ++ MIPG+ V ++K +K +EA+I++MT EER+ P +
Sbjct: 332 DFLEQLQGLKNMGPIDQLFSMIPGVNMSKLKGVNVSDKDIKRIEAIIQSMTKEERQNPSI 391
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S R+KR+A SG + QQV+ L+ Q Q R MK
Sbjct: 392 INGS--RKKRIAAGSGTSIQQVNSLIKQFEQTRKMMKQF 428
>gi|373464402|ref|ZP_09555941.1| signal recognition particle protein [Lactobacillus kisonensis
F0435]
gi|371762604|gb|EHO51133.1| signal recognition particle protein [Lactobacillus kisonensis
F0435]
Length = 461
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/420 (49%), Positives = 297/420 (70%), Gaps = 10/420 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VVR+FV+ V ++A G ++ G+ P QQ+VKIV +EL K+MG +
Sbjct: 15 MREIRLALLEADVNFQVVRQFVKTVEQRATGAKVLEGLNPSQQIVKIVDEELTKMMGEQA 74
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L ++ PTVI+++GLQG GKTT KLA LK +Q +L+A DVYRPAAI+QL
Sbjct: 75 VPLNKSEKIPTVIMMSGLQGAGKTTTVGKLALKLKNEQDARPLLIADDVYRPAAIEQLQT 134
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV+ GT+V P +IAK+GL++A++ + D VI+DTAGRLQID+ +M ELK++K
Sbjct: 135 VGQQIDVPVFQLGTDVDPVEIAKRGLQQAQENHNDYVIIDTAGRLQIDEKLMGELKNIKD 194
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E+LLV+DAMTGQ A A FN + +TG +LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 195 AVHPDEILLVIDAMTGQNAVATAEGFNKTLDVTGVVLTKLDGDTRGGAALSIRAVTDKPI 254
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+M DL+ FYPDRMA RILGMGD+LS +EK Q+ Q+ AEE+Q+KI FDF
Sbjct: 255 KFVGQGEKMSDLDVFYPDRMASRILGMGDMLSLIEKTQKEYDQKQAEELQEKIQENTFDF 314
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q + +MG M ++ MIPGM PA V K + ++A+I +MT +ER
Sbjct: 315 NDFLDQLSQIQKMGPMDEIMKMIPGMAN-NPALQNVNMDPKDMDHLKAIIYSMTEQERTD 373
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDA 417
P++L +P RR+R+A+ SG+ Q+V++++ Q Q MK +M + G++ + N+ +A
Sbjct: 374 PDVL--NPSRRRRIAKGSGRPIQEVNRMIKQFGQ----MKTMMNKVSKGNMSGMENMMNA 427
>gi|259046590|ref|ZP_05736991.1| signal recognition particle protein [Granulicatella adiacens ATCC
49175]
gi|259036755|gb|EEW38010.1| signal recognition particle protein [Granulicatella adiacens ATCC
49175]
Length = 478
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/413 (49%), Positives = 293/413 (70%), Gaps = 8/413 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ V+E+A+G ++ + P QQ+VKIV +EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVRKVNERALGANVLEALSPAQQVVKIVNEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ F PTV+++ GLQG GKTT + KLA+++ K + K +LVA DVYRPAAIDQL
Sbjct: 92 APFRFEAKPPTVVMMVGLQGAGKTTTAGKLASFMAKHEKKRPLLVAADVYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ PV++ G +V P +IAKQ +E+AK D+VI+DTAGRL ID+ +M+EL+++K
Sbjct: 152 LGKQLNFPVFSLGNQVSPVEIAKQAIEKAKIDGRDLVIIDTAGRLHIDETLMEELQNIKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP+E+LLVVD+MTGQ+A + TFN + ITG ILTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 VANPSEILLVVDSMTGQDAVNVAQTFNERLDITGVILTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K GRGE++ED E FYP+RMA RILGMGD+++ +EKAQ+ + A+EM KI + FDF
Sbjct: 272 KFTGRGEKLEDFEIFYPERMASRILGMGDMMTLIEKAQQDFDEAKAQEMADKIKANTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF+ Q V +MG + ++ MIPG+ K+ ++ K M+A++ +MTP+ERE P
Sbjct: 332 NDFIDQLDQVNKMGPLEDILKMIPGLNKMAGLNDLKVDPKDTARMKAIVLSMTPQERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
++L+++ RRKR+A S + +V++L+ Q + K +M M G++ L
Sbjct: 392 DILSQA--RRKRIAAGSARPLAEVNRLIKQFNE----SKKMMNQMSNGNMKGL 438
>gi|323141933|ref|ZP_08076793.1| signal recognition particle protein [Phascolarctobacterium
succinatutens YIT 12067]
gi|322413600|gb|EFY04459.1| signal recognition particle protein [Phascolarctobacterium
succinatutens YIT 12067]
Length = 448
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/410 (50%), Positives = 292/410 (71%), Gaps = 6/410 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+AVG + G+ P QQ++KIV +EL++L+GG
Sbjct: 32 MREVRMALLEADVNFKVVKDFVAKVKERAVGEAIGEGLNPHQQIIKIVNEELIELLGGTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L A PTVI+L GLQG GKTT + KLANYLK++ K +LVAGDVYRPAAI QL +L
Sbjct: 92 SKLTVAPKPPTVIMLVGLQGAGKTTTAGKLANYLKRKHKKPLLVAGDVYRPAAITQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV+T G +V P +IA++ +E+A D VI+DTAGRL I++ +M+EL+++K
Sbjct: 152 GEQLNVPVFTLGDKVSPVEIAQKAMEKAHSLACDTVIIDTAGRLHINEELMEELRNIKGA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P E+LLVVDAMTGQ+A + +F+ E+GI G I+TKLDGD+RGGA LSVK V+GKP+K
Sbjct: 212 VHPQEILLVVDAMTGQDAVTVAESFDKELGIDGLIVTKLDGDARGGAVLSVKAVTGKPVK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
L+G GE+++ LEPF+PDRMA RILGMGD+L+ VEK Q A EM+KK+ F
Sbjct: 272 LIGLGEKLDALEPFHPDRMASRILGMGDILTLVEKIQSTTDLAKALEMEKKLRKDEFTLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTPEEREK 357
FL Q + V ++GS+ ++G+IPGMG I+ +++EA EK +EA+I +MT +ER+K
Sbjct: 332 QFLDQMQQVKKLGSLETILGLIPGMGGIS-QKLKEANVDEKEFDRIEAIIRSMTKKERQK 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 407
PE++ S RRKR+A G Q V++L+ + + MK + G+ + S
Sbjct: 391 PEIINGS--RRKRIAAGCGMRVQDVNKLLKNFEESKKMMKRMQGMAKFAS 438
>gi|304316926|ref|YP_003852071.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778428|gb|ADL68987.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 446
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/399 (49%), Positives = 283/399 (70%), Gaps = 2/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++++ ALLEADV+ VV+ F+ V+E+++G ++ + P Q ++KIV DEL LMG +
Sbjct: 32 MKEVKIALLEADVNFKVVKEFINTVTEKSLGQEVMESLTPAQHVIKIVNDELTALMGSKE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ F+ PT+I++ GLQG GKTT S KLANYLK +GK+ +LVA D+YRPAAI QL ++
Sbjct: 92 SKINFSDKPPTIIMMVGLQGSGKTTTSGKLANYLKSKGKNPVLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G + VPV++ G + P IAK ++ AK N +VVI+DTAGRL ID+ +MDELK++K
Sbjct: 152 GSSINVPVFSMGDKTTPVDIAKGAVDFAKNNNYNVVIIDTAGRLHIDEELMDELKNIKDA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+LLVVDAMTGQ+ + +FN ++ I G ILTKLDGD+RGGAALSVK V+ KPIK
Sbjct: 212 VNPNEILLVVDAMTGQDVVNVAESFNEKLDIDGVILTKLDGDTRGGAALSVKAVTHKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+ GE++ D+E F+PDRMA RILGMGDVLS +EKAQ + ++ A E+QKKI+ F F+
Sbjct: 272 FIASGEKLTDIEVFHPDRMASRILGMGDVLSLIEKAQSQIDEKKALELQKKILEQQFSFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q + + MG + ++ MIPG+ V ++K++K +EA+I++MT EER+ P +
Sbjct: 332 DFLEQLQGLKNMGPIDQLFSMIPGVNMSKLKGVNVSDKAIKRIEAIIQSMTKEERQNPSI 391
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S R+KR+A SG + QQV+ L+ Q Q R MK
Sbjct: 392 INGS--RKKRIAAGSGTSIQQVNSLIKQFEQTRKMMKQF 428
>gi|404329162|ref|ZP_10969610.1| signal recognition particle protein [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 447
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 287/402 (71%), Gaps = 4/402 (0%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
R+IR ALLEADV+ VV+ FV+ V E+A+G +++ + P QQ++K+V+DEL +LMGGE +
Sbjct: 33 REIRLALLEADVNFKVVKTFVKRVQERAIGQEVLKSLTPGQQIIKVVQDELTELMGGEQT 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVIL 120
+L FA PTVIL GLQG GKTT +AKLANY++K K +++A D+YRPAAI QL L
Sbjct: 93 KLNFALKPPTVILFVGLQGAGKTTSAAKLANYIRKAHNKKPLMIAADIYRPAAIKQLQTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ +PV++ G +V P I +QGLE+A+ + D+V++DTAGRL +D A+M+EL+ +K V
Sbjct: 153 GRQLDIPVFSLGDQVNPVDIVRQGLEQAQTDHNDLVMIDTAGRLHVDDALMEELEQIKSV 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P E+ LVVDAMTGQ+A + FN + ITG I+TKLDGD+RGGAALS++ V+GKPIK
Sbjct: 213 SHPDEIFLVVDAMTGQDAVNVAGAFNDRLDITGVIMTKLDGDTRGGAALSIRSVTGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M+ LEPF+PDRMA RILGMGDVLS +EKAQ + +E A EM KK+ + +F +
Sbjct: 273 FVGMGEKMDALEPFHPDRMASRILGMGDVLSLIEKAQNTVDEEKAREMAKKLQTVSFTLD 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q + +MG + ++ M+PG K + ++ EK + +EAMI +MTP E+ P+
Sbjct: 333 DFLEQIGQIRKMGPLQDLLAMMPGANKFKGMKNMQIDEKKIDQVEAMIRSMTPLEKNDPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
++ S RRKR+A SG + V++L+ Q M+ MK MG
Sbjct: 393 IINAS--RRKRIALGSGTSIADVNRLLKQFKDMKKMMKQFMG 432
>gi|319790268|ref|YP_004151901.1| signal recognition particle protein [Thermovibrio ammonificans
HB-1]
gi|317114770|gb|ADU97260.1| signal recognition particle protein [Thermovibrio ammonificans
HB-1]
Length = 448
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/403 (52%), Positives = 293/403 (72%), Gaps = 8/403 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+I+ ALLEADV+ VV +F+ + E+A+G +++GV P QQLVKIV DELV+ +GGE
Sbjct: 31 LREIKLALLEADVNYKVVSKFINDIKEKALGAEVVKGVNPAQQLVKIVYDELVEALGGEG 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L KS+P VILL GLQG GKTT +AKLANYLKKQGK +L + DVYRPAA+ QL L
Sbjct: 91 AKLEL-KSKPAVILLIGLQGSGKTTTAAKLANYLKKQGKKVLLTSADVYRPAAMLQLKKL 149
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+++GVPV+ E +IAK L++AK++N DV+I+DTAGRL ID+ +++E K +K
Sbjct: 150 GDKIGVPVFLEEDEKDAVKIAKDALKKAKEENYDVLIIDTAGRLHIDEELLEEAKRIKEE 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP EVL V+DAMTGQE+ + FN +G+TG +LTK+D D+RGG ALSVK V+GKPIK
Sbjct: 210 TNPDEVLFVIDAMTGQESVNIAKAFNEAVGMTGIVLTKMDSDARGGVALSVKGVTGKPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ED +PFYPDR+A RILGMGD++S VEKAQEV+ +++A MQ+K++S F
Sbjct: 270 FAGVGEKIEDFQPFYPDRVASRILGMGDIVSLVEKAQEVIDEKEALSMQEKLLSGEFTLE 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREA--EKSLKIMEAMIEAMTPEERE 356
DF KQ + + R+G + +VI MIPG+G KI Q+ E +K LK +EA+I +MTPEER
Sbjct: 330 DFRKQLQMIQRLGPLQQVIRMIPGLGSQKILK-QLEEVIDDKKLKRIEAIINSMTPEERR 388
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ S R++R+A+ SG + ++V L+ Q QM++ MK +
Sbjct: 389 NHAIINAS--RKRRIARGSGTSVKEVDALLKQFVQMKMAMKQM 429
>gi|366053084|ref|ZP_09450806.1| signal recognition particle protein [Lactobacillus suebicus KCTC
3549]
Length = 480
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/420 (50%), Positives = 301/420 (71%), Gaps = 15/420 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDIR ALLEADV+ VV+ FV+ V +A G +++G+ P QQ+VKIV +EL K+MG E
Sbjct: 32 MRDIRLALLEADVNFKVVKDFVKQVRTRAAGAEVLKGLNPAQQIVKIVNEELTKMMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
+L ++ PT+I++AGLQG GKTT + KLA LK Q M +A D+YRPAAIDQL
Sbjct: 92 VDLNKSEKIPTIIMMAGLQGAGKTTTAGKLALKLKNDQNARPMFIAADIYRPAAIDQLEQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ E + VPV+ GT+V P +I +QGLE+A+ ++ D VI+DTAGRLQID+ +MDEL ++K+
Sbjct: 152 VAESIDVPVFQLGTDVDPVEIVRQGLEQARDQHNDYVIIDTAGRLQIDEKLMDELANIKK 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LLVVDAMTGQ A FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LADPDEILLVVDAMTGQNAVETAQGFNDKLDITGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+M+DL+ F+PDRMA RILGMGD+L+ +EKAQ+ +E A++ +K+ +FDF
Sbjct: 272 KFVGQGEKMDDLDVFHPDRMASRILGMGDMLTLIEKAQKDFDEEQAQKTVEKMRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMTPEERE 356
NDFL Q V +MGSM ++ MIPGM PA ++ A K ++ ++A++ +MTPEERE
Sbjct: 332 NDFLDQMSQVQKMGSMEDIMKMIPGMAN-NPA-LKNANIDPKDMEHIKAIVYSMTPEERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGV--MEGGSLP 409
P++L +P RR+R+A +G+ +V++++ Q QM+ MK N+ G+ + GG++P
Sbjct: 390 NPDVL--NPSRRRRLAAGAGRPVVEVNRMIKQFNQMKKMMKQVSNGNMSGMENLMGGNMP 447
>gi|375090633|ref|ZP_09736947.1| signal recognition particle protein [Facklamia languida CCUG 37842]
gi|374565394|gb|EHR36665.1| signal recognition particle protein [Facklamia languida CCUG 37842]
Length = 490
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/423 (48%), Positives = 297/423 (70%), Gaps = 8/423 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V+E+A+G +++ + P QQ+VKIV +EL +LMGGE
Sbjct: 32 MREIRLALLEADVNFKVVKTFVKQVNERALGSEVLQSLSPAQQVVKIVDEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQG-KSCMLVAGDVYRPAAIDQLVI 119
L A PTVI++AGLQG GKTT KLANYLK+QG K +LVAGDVYRPAAIDQL
Sbjct: 92 VPLNLATQPPTVIMMAGLQGAGKTTTVGKLANYLKEQGLKRPLLVAGDVYRPAAIDQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G Q+ V++ GT+V P +IA+Q LE A+ + DVV++DTAGRL +++ +M+ELK +K
Sbjct: 152 IGRQLNFEVFSQGTDVSPVEIARQALERARIQGNDVVLIDTAGRLHVNEELMNELKQIKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E+LL VDAMTGQ+A + FN + ITG I+TKLDGD+RGGAALS++ + KPI
Sbjct: 212 AVHPDEILLTVDAMTGQDAVNVAQAFNDALDITGVIITKLDGDTRGGAALSIRSIIDKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G+GE++ LEPF+PDRM+ RILGMGD+++ +EKAQ+ +E+A +M KI A+FDF
Sbjct: 272 KFTGQGEQLNALEPFHPDRMSSRILGMGDMMTLIEKAQQDFDEEEAAKMADKIKDASFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF+ Q V +MG + +I MIPG+ K+ Q +K + + A++++MTP ER P
Sbjct: 332 NDFIDQMDQVRKMGPLKDLIKMIPGINKVPGIQDFNIDDKDMNRIRAVVQSMTPYERTHP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDAL 418
+ +++S RR+R+A G+T +V+QL+ Q Q R N+M M G + ++ + + +
Sbjct: 392 DEISQS--RRRRIASGCGQTLNEVNQLIKQFNQSR----NMMAQMSNGKMSGMNKMMNQM 445
Query: 419 KSE 421
+ +
Sbjct: 446 QQQ 448
>gi|283798055|ref|ZP_06347208.1| signal recognition particle protein [Clostridium sp. M62/1]
gi|291074194|gb|EFE11558.1| signal recognition particle protein [Clostridium sp. M62/1]
gi|295091808|emb|CBK77915.1| signal recognition particle protein [Clostridium cf.
saccharolyticum K10]
Length = 452
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/403 (51%), Positives = 291/403 (72%), Gaps = 9/403 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ ALLEADVS VV++F+ +V E+AVG ++ G+ P Q ++KIV +ELVKLMG E+
Sbjct: 32 LREVKMALLEADVSFKVVKQFINSVQERAVGQDVLNGLNPGQMVIKIVNEELVKLMGSEM 91
Query: 61 SELVFAKSRP----TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQ 116
+E+ RP TVIL+AGLQG GKTT +AK+A LK +G+S +L A D+YRPAAI+Q
Sbjct: 92 TEIAL---RPANEITVILMAGLQGAGKTTTTAKIAGKLKAKGRSPLLAACDIYRPAAIEQ 148
Query: 117 LVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD 176
L I GE+ GVPV++ GT KP IAK +E A K +VVI+DTAGRL ID+ MM+EL +
Sbjct: 149 LKINGEKQGVPVFSMGTGHKPVNIAKAAIEHAAKNGNNVVILDTAGRLHIDEDMMNELVE 208
Query: 177 VKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSG 236
+K ++ + LL+VDAMTGQ+A + FN +IGI G ILTK+DGD+RGGAALS+K V+G
Sbjct: 209 IKENVSVDQTLLIVDAMTGQDAVNVAGMFNDKIGIDGVILTKMDGDTRGGAALSIKAVTG 268
Query: 237 KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN 296
KPI VG GE++ DLE FYPDRMA RILGMGD++S ++KA V+ +E A+E+ +K+ A
Sbjct: 269 KPILYVGMGEKLSDLEQFYPDRMASRILGMGDIMSIIDKATAVIDEEKAKELSQKLKKAE 328
Query: 297 FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEERE 356
FD+NDFL Q R + +MG M+ ++ M+PGM ++ + EK ++ +EA+I +MT EER
Sbjct: 329 FDYNDFLDQMRQIKKMGGMASILNMMPGMNQLKDVDLDGNEKVMERVEAIILSMTKEERS 388
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
P+L+ +P R+KR+A+ +G +V++LV Q QM+ MK L
Sbjct: 389 NPDLI--NPSRKKRIARGAGVDIAEVNRLVKQFEQMKKMMKQL 429
>gi|116492613|ref|YP_804348.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pediococcus
pentosaceus ATCC 25745]
gi|421894393|ref|ZP_16324882.1| signal recognition particle protein [Pediococcus pentosaceus IE-3]
gi|116102763|gb|ABJ67906.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pediococcus
pentosaceus ATCC 25745]
gi|385272697|emb|CCG90254.1| signal recognition particle protein [Pediococcus pentosaceus IE-3]
Length = 476
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/417 (50%), Positives = 288/417 (69%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV++FV+ V +QA+G ++ G+ P QQ+VK+V DEL+K+MG E
Sbjct: 32 MREIRLALLEADVNFKVVKQFVKTVRDQAIGSDILDGLNPAQQIVKLVNDELIKMMGTED 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
+ L + PT+I+++GLQG GKTT + KLA LK + K+ +L+A DVYRPAAIDQLV
Sbjct: 92 APLNKSPKIPTIIMMSGLQGAGKTTTTGKLALKLKNEQKARPLLIAADVYRPAAIDQLVQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPVY GT+V P I + GLE+A + D V +DTAGRLQID+ +M EL D+K
Sbjct: 152 VGQQIDVPVYQEGTDVNPVDIVRHGLEQAAENKNDYVFIDTAGRLQIDEKLMQELADIKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LLVVDAMTGQ A FN ++ ITG ILTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAHPDEILLVVDAMTGQNAVNTAEGFNEKLDITGVILTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+MEDL+ F+PDRMA RILGMGD+L+ +EK Q+ Q+ A EM +KI FDF
Sbjct: 272 KFVGQGEKMEDLDVFHPDRMASRILGMGDMLTLIEKTQKDFDQKQAAEMTQKIRENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q V MG + ++ MIPGM PA V K L+ +A++ +MT ERE
Sbjct: 332 NDFVDQLNQVQNMGPIEDIMKMIPGMAN-NPAMQNVNVDPKDLEHTKAIVYSMTKAEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+LL +P RR+R+A SG+ +V++++ Q Q MK +M M G+ + +
Sbjct: 391 PDLL--NPSRRRRIAAGSGRPVVEVNRMIKQFNQ----MKKMMNQMSKGNFNGMEGM 441
>gi|261880314|ref|ZP_06006741.1| signal recognition particle protein [Prevotella bergensis DSM
17361]
gi|270333004|gb|EFA43790.1| signal recognition particle protein [Prevotella bergensis DSM
17361]
Length = 451
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/402 (52%), Positives = 282/402 (70%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q LVKIV DEL KLMGGE
Sbjct: 31 LKDVRRALLDADVNFKVAKNFTNTVKDKALGMNVLTAVKPSQLLVKIVHDELAKLMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
SEL + +P V+L++GLQG GKTT S KLAN LK K+GK+ +LVA DVYRPAAI+QL +
Sbjct: 91 SELHLS-GKPAVVLMSGLQGSGKTTFSGKLANLLKNKRGKNPLLVACDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGVPVYT ++IA ++EAK K DVVIVDTAGRL +D+ MM+E+ +K
Sbjct: 150 VGEQVGVPVYTEEGNKNVNEIALHAIQEAKAKGNDVVIVDTAGRLAVDEDMMNEIASLKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E L VVD+MTGQ+A FN I G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AISPDETLFVVDSMTGQDAVNTAKEFNDRIDFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME L+ F+PDRMA RILGMGDV+S VE+AQE +E+A +QKKI FDF
Sbjct: 270 KFIGTGEKMEALDVFHPDRMADRILGMGDVVSLVERAQEQFDEEEARRLQKKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + +EA+I++MTP ER PE
Sbjct: 330 NDFLNQIEQIKKMGNLKDLAAMIPGVGKAIK-DIDIDDNAFVGIEAIIKSMTPRERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L +S RR R+A+ SG + Q+V++LV Q Q R MK + G
Sbjct: 389 VLNQS--RRLRIAKGSGTSIQEVNRLVKQFDQTRKMMKMVTG 428
>gi|260437024|ref|ZP_05790840.1| signal recognition particle protein [Butyrivibrio crossotus DSM
2876]
gi|292810333|gb|EFF69538.1| signal recognition particle protein [Butyrivibrio crossotus DSM
2876]
Length = 448
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/411 (50%), Positives = 294/411 (71%), Gaps = 12/411 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++++ ALLEADV+ VV++FV VSE+AVG ++ + P Q ++KIV +E+V LMG E
Sbjct: 32 MKEVKMALLEADVNFKVVKQFVNTVSERAVGQDVMSSLTPGQMVIKIVNEEMVALMGSET 91
Query: 61 SELVFAK-SRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ F + PTVI++AGLQG GKTT +AK+A LK++GK +LVA DVYRPAAI QL I
Sbjct: 92 TEISFVPGAAPTVIMMAGLQGAGKTTTTAKIAGKLKEKGKRPLLVACDVYRPAAIKQLQI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
GE+ GVPV+ G KP IAK L A+K N +VVI+DTAGRL +D+ MM+ELK++K
Sbjct: 152 NGEKQGVPVFEMGDNNKPVDIAKAALAHAQKNNNNVVILDTAGRLHVDEDMMNELKEIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+N + +LVVDAMTGQ+A + +TFN +IGI G +LTKLDGD+RGGAALS+K V+GKPI
Sbjct: 212 AVNVHQTILVVDAMTGQDAVNVASTFNEQIGIDGVVLTKLDGDTRGGAALSIKAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
+G GE++ DLE FYPDRMA RILGMGDVL+ +EK Q +E A+EM++K+ + FDF
Sbjct: 272 LYIGMGEKLSDLEQFYPDRMASRILGMGDVLTLIEKVQADFDEEKAKEMERKLKKSEFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-----EKSLKIMEAMIEAMTPEE 354
ND+L+ + V ++G + +++ M+PGM +Q++ A EK + +EA+I +MTP E
Sbjct: 332 NDYLESFKQVKKLGGIGKMLNMMPGMN----SQMKNAADNVDEKQIARVEAIIYSMTPAE 387
Query: 355 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
R P+LL +P R+ R+A+ +G +V++LV Q QM+ MK L G+M G
Sbjct: 388 RANPKLL--NPSRKNRIARGAGVDIAEVNRLVKQQEQMKKMMKQLPGMMGG 436
>gi|387793034|ref|YP_006258099.1| signal recognition particle protein [Solitalea canadensis DSM 3403]
gi|379655867|gb|AFD08923.1| signal recognition particle protein [Solitalea canadensis DSM 3403]
Length = 444
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/398 (52%), Positives = 277/398 (69%), Gaps = 5/398 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++R+ALL+ADV+ + F V E+A+G+ ++ V P Q +VK+V DELV+LMGG V
Sbjct: 31 VKEVRKALLDADVNYKTAKAFTDTVKEKALGMNVLTSVSPGQLMVKVVNDELVELMGGNV 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVI 119
SEL K P++IL+AGL G GKTT + KLANYLK Q GK LVA DVYRPAAIDQL +
Sbjct: 91 SELDI-KQNPSIILIAGLNGAGKTTFTGKLANYLKTQKGKKPFLVAADVYRPAAIDQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+GVPVYT P +IA+ G+ +AK VVI+DTAGRL ID+ MM+E+ DVK
Sbjct: 150 LSEQIGVPVYTDYESKDPVKIAEAGIAKAKADGNTVVIIDTAGRLAIDEQMMNEIADVKA 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
P E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAALS+K V KPI
Sbjct: 210 ATKPHEILFVVDSMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAALSIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+M+ ++ FYPDRMA RILGMGDV+S VE+AQ+ ++ A E+QKKI FDF
Sbjct: 270 KFIGTGEKMDAIDVFYPDRMASRILGMGDVVSLVERAQQQFDEKQAAELQKKIRKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ ++GMIPG+GK V + + K +EA+I++MTP ERE PE
Sbjct: 330 NDFLSQLNQIKKMGNIKDLMGMIPGVGKAIK-DVDIDDDAFKHIEAIIQSMTPTERENPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
L+ + RR+R+A SG + +V++L+ Q MR MK
Sbjct: 389 LINGN--RRQRIANGSGTSIAEVNKLLKQFEDMRKMMK 424
>gi|311030155|ref|ZP_07708245.1| signal recognition particle protein [Bacillus sp. m3-13]
Length = 448
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 297/401 (74%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ V+E+AVG +++ + P QQ++K+V++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVNERAVGQEVMKSLTPGQQVIKVVKEELTALMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ + PTVI++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIAVSSRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +++AK ++ D V++DTAGRL +D+ +MDELK VK
Sbjct: 152 LGKQLSMPVFSLGDQVSPVEIAKQAIQKAKDEHHDYVLIDTAGRLHVDENLMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+ LVVDAMTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALSVK V+ PI
Sbjct: 212 ISNPDEIFLVVDAMTGQDAVNVAQSFNEQLGLTGVVLTKLDGDTRGGAALSVKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+++ +EPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + NF F
Sbjct: 272 KYIGMGEKLDAIEPFHPERMASRILGMGDVLTLIEKAQSNVDEEKAKELEQKLRTMNFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + ++GMIPG K+ + V+ EK + +EA+I++MT E++ P
Sbjct: 332 DDFLEQLGQVRNMGPLDEILGMIPGANKMKGLKNVQVDEKQIGHVEAIIQSMTKAEKDNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+L+ S R+KR+A+ SG+ Q+V++L+ Q +M+ MK +
Sbjct: 392 DLINAS--RKKRIAKGSGRPIQEVNRLLKQFEEMKKMMKQM 430
>gi|323702674|ref|ZP_08114335.1| signal recognition particle protein [Desulfotomaculum nigrificans
DSM 574]
gi|333923302|ref|YP_004496882.1| signal recognition particle protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323532337|gb|EGB22215.1| signal recognition particle protein [Desulfotomaculum nigrificans
DSM 574]
gi|333748863|gb|AEF93970.1| signal recognition particle protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 444
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/415 (50%), Positives = 293/415 (70%), Gaps = 8/415 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+A+G ++ + P QQ++KIV+DEL +L+GG
Sbjct: 31 MREVRMALLEADVNFKVVKEFVAHVKERAIGQDVLESLSPAQQVIKIVKDELTELLGGTQ 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+++ + PT+I+L GLQG GKTT + KLA L KQG+ +LVAGD+YRPAAI QL +L
Sbjct: 91 AKINLSPKPPTIIMLVGLQGAGKTTTAGKLAKLLSKQGRRPLLVAGDIYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ +PV++ G E P +IAK +E+A DVVI+DTAGRL I++ +MDEL ++K
Sbjct: 151 GEQLNIPVFSLGQE-DPVKIAKAAVEQANSTGRDVVIIDTAGRLHINEELMDELANIKAS 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQEA + TFN ++G+ G I+TKLDGD+RGGAALSV++V+G PIK
Sbjct: 210 VKPHEILLVVDAMTGQEAVNVADTFNQKLGLDGIIMTKLDGDARGGAALSVRKVTGCPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ E A ++ +KI A F+
Sbjct: 270 FAGMGEKLDALEPFHPDRMADRILGMGDVLTLIEKAQANFDAEQAAKLNRKIRQAEFNLE 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTPEEREK 357
DFL+Q + V +MG + +V+ MIPGM K+T Q+++ EK L +EA+I +MTP ER+
Sbjct: 330 DFLEQMQQVKKMGPLEQVLSMIPGMNKLT-KQLKDQQIDEKELAQVEAIIYSMTPWERQH 388
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-SLPAL 411
PE + S R+KR+A+ SG Q V+QL+ Q Q R MK + + + G LP L
Sbjct: 389 PERIDGS--RKKRIARGSGTRVQDVNQLLKQFEQTRKMMKQIASMTKSGRKLPKL 441
>gi|406669313|ref|ZP_11076592.1| signal recognition particle protein [Facklamia ignava CCUG 37419]
gi|405583826|gb|EKB57757.1| signal recognition particle protein [Facklamia ignava CCUG 37419]
Length = 496
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/437 (47%), Positives = 301/437 (68%), Gaps = 22/437 (5%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V+E+A+G ++ + P QQ+VKIV +EL LMGGE
Sbjct: 32 MREIRLALLEADVNFQVVKTFVKRVNERALGSDVLESLSPAQQVVKIVNEELTDLMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGK--SCMLVAGDVYRPAAIDQLV 118
+ L +K PTVI++AGLQG GKTT KL NYL K + +LVA DVYRPAAIDQL
Sbjct: 92 APLNISKQPPTVIMMAGLQGAGKTTTVGKLTNYLSKHHQLNRPLLVAADVYRPAAIDQLQ 151
Query: 119 ILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVK 178
+G+Q+G V+ GT+V P Q+A L AK + DVVI+DTAGRL +++ +M+EL+++K
Sbjct: 152 TIGQQIGAEVFAQGTDVNPVQLATDALAHAKLQGNDVVIIDTAGRLHVNEELMNELRNIK 211
Query: 179 RVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKP 238
++P E+LL VDAMTGQ+A + FN + ITG I+TKLDGD+RGGAALS++ ++ KP
Sbjct: 212 SAVHPDEILLTVDAMTGQDATNVAEAFNDALDITGVIITKLDGDTRGGAALSIRAITEKP 271
Query: 239 IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 298
IK G+GE+++ LEPF+PDRMAGRILGMGD+L+ +EKAQ+ + +AE M +KI A+FD
Sbjct: 272 IKFTGQGEQLDALEPFHPDRMAGRILGMGDMLTLIEKAQQDFDEAEAERMAEKIKDASFD 331
Query: 299 FNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEERE 356
FNDF++Q V +MG + ++ +IPG+ KI P Q ++K + ++ ++ +MTPEERE
Sbjct: 332 FNDFIQQMDQVTKMGPLKDLMKLIPGVNKI-PGFDQFDVSDKDMARLKGIVMSMTPEERE 390
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ---------------MRVRMKNLMG 401
P+++++S RR+R+A+ SG+ +V+QL+ Q Q MR MK +
Sbjct: 391 NPDIISQS--RRRRIARGSGRELNEVNQLIKQFNQTRKMMSQMSQGKNGSMRKMMKQMKN 448
Query: 402 VMEGGSLPALSNLEDAL 418
+ +G +P + +L + +
Sbjct: 449 LPKGQGMPDMGDLSNLM 465
>gi|403383367|ref|ZP_10925424.1| signal recognition particle-like (SRP) component [Kurthia sp. JC30]
Length = 455
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/423 (51%), Positives = 306/423 (72%), Gaps = 11/423 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R AL+EADV+L VV++FV++VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRFALIEADVNLKVVKKFVKSVSERAVGADVMQSLTPGQQVIKIVQEELTALMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S + F+ PTVI++ GLQG GKTT + KLAN L KK K +LVA DVYRPAA+ QL
Sbjct: 92 SPVKFSNRPPTVIMMVGLQGAGKTTTTGKLANVLRKKYNKKPLLVAADVYRPAAVKQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV+ GTEV P IA+ +E AK+++ DVVI+DTAGRL ID+A+M ELKD++
Sbjct: 152 LGKQLSIPVFEKGTEVSPVDIARDAIEFAKEEHHDVVIIDTAGRLHIDEALMQELKDIRA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P EV LVVDAMTGQ+A + +FN +GITG +LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 LKEPDEVFLVVDAMTGQDAVNVAESFNDAVGITGVVLTKLDGDTRGGAALSIRSVTEKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ LEPF+P+RMA RILGMGDVLS +EKAQE + E A+E+++K + +F F
Sbjct: 272 KFVGMGEKMDALEPFHPERMAQRILGMGDVLSLIEKAQETVDAEKAKELEEKFKTQSFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q V +MG + +I MIPGM K+ ++ +K + +EA+I++MT ER P
Sbjct: 332 DDFLDQMSQVKKMGPLEDIIKMIPGMNKVKGLDKMNFDDKQINHIEAIIQSMTIAERTNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME--GG-----SLPAL 411
E++ S RRKR+A SG++ Q+V++L+ Q +M+ MK + G+M GG LP +
Sbjct: 392 EIITSS--RRKRIALGSGRSVQEVNRLIKQFDEMKKMMKQMSGMMNPAGGKKKKFKLPGM 449
Query: 412 SNL 414
+L
Sbjct: 450 DSL 452
>gi|392394728|ref|YP_006431330.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390525806|gb|AFM01537.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 453
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/399 (51%), Positives = 287/399 (71%), Gaps = 4/399 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+++G ++ + P QQ++KIV +E+V LMGG
Sbjct: 31 MREVRMALLEADVNFKVVKDFVAKVKERSIGQEVLESLSPGQQVIKIVNEEMVALMGGVS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ + PT+I+L GLQG GKTT AKLAN LKKQGK +LVA D+YRPAAI QL +L
Sbjct: 91 SKINISSKPPTIIMLVGLQGAGKTTHGAKLANMLKKQGKHPLLVACDIYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV++ G E P +IA L+ A + +DVVI+DTAGRL I++ +M EL+D+K
Sbjct: 151 GEQIKVPVFSLGQE-NPVEIAAASLQHANSQGLDVVIIDTAGRLHINEELMGELRDIKAS 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGGAALSVK V+G PIK
Sbjct: 210 VKPHEILLVVDAMTGQDAVNVAESFHNELGVDGIILTKLDGDTRGGAALSVKAVTGCPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+M+ +EPF+P+RMA RILGMGDVL+ +EKAQE ++ A EM++K+ F +
Sbjct: 270 FAGIGEKMDAIEPFFPERMASRILGMGDVLTLIEKAQEAFDEKQAREMEQKLRKQEFTLD 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG ++ ++ MIPG+GK V+ EK + +EA+I +MTPEER KP L
Sbjct: 330 DFLDQMQQLKKMGPLNSLLEMIPGVGK-QMKDVQVDEKDMAHVEAIIHSMTPEERRKPAL 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ +S R++R+A+ SG + Q+V +L+ Q QM+ MK
Sbjct: 389 IKDS--RKRRIAKGSGTSVQEVGRLLKQFEQMQKMMKQF 425
>gi|302872185|ref|YP_003840821.1| signal recognition particle protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575044|gb|ADL42835.1| signal recognition particle protein [Caldicellulosiruptor
obsidiansis OB47]
Length = 443
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/399 (50%), Positives = 281/399 (70%), Gaps = 2/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++++ ALLEADV+ VV+ F+ V+++AVG ++ + P QQ++KIV DE+V L+GG
Sbjct: 31 MKEVKLALLEADVNYKVVKDFINTVTQKAVGEEVLESLTPAQQVIKIVYDEMVNLLGGSD 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L F+ S ++ ++ GLQG GKTT + KLA LKKQGK+ LVA D+YRPAAI QL ++
Sbjct: 91 TKLTFSPSGFSIYMMVGLQGSGKTTTAGKLAGLLKKQGKNPSLVACDIYRPAAIKQLEVV 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
++VGV Y T +IAK G+E AK DVVI+DTAGRL I++ +MDELK++K
Sbjct: 151 AQKVGVKCYADYTSQDAVKIAKDGIEFAKSNRSDVVIIDTAGRLHINQELMDELKNIKNA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ PTE+LLVVDAMTGQ+A + FN ++GI G I+TKLDGD+RGGAALSVK ++GKPIK
Sbjct: 211 VKPTEILLVVDAMTGQDAVNVAEAFNDQLGIDGIIMTKLDGDTRGGAALSVKAITGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+MEDLE F+PDRMA RILGMGDVL+ +EKAQE + Q+ AEE++KK+ S F
Sbjct: 271 FAGVGEKMEDLEVFHPDRMASRILGMGDVLTLIEKAQEAIDQKKAEELEKKLRSMQFTLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +MT EER+ P +
Sbjct: 331 DFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKELKKIEAIINSMTKEERQDPSI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 391 INSS--RKRRIAMGSGTTVQDVNRLLKQFEDMKRMMKQF 427
>gi|340355026|ref|ZP_08677720.1| signal recognition particle protein [Sporosarcina newyorkensis
2681]
gi|339622823|gb|EGQ27336.1| signal recognition particle protein [Sporosarcina newyorkensis
2681]
Length = 451
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/403 (50%), Positives = 298/403 (73%), Gaps = 8/403 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R AL+EADV+L VV+ FV+ VSE+AVG +++ + P QQ+VKIV+DEL LMGGE
Sbjct: 32 MREVRFALIEADVNLKVVKSFVKTVSERAVGQDVMKSLTPGQQVVKIVKDELTNLMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + FA+ PTVI++ GLQG GKTT + KLA L KK K+ +LVA D+YRPAAI QL
Sbjct: 92 NPIQFARKSPTVIMMVGLQGAGKTTTTGKLATVLRKKHNKNPLLVAADIYRPAAIQQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ GT+ P +IA++ +EEA+K++ DVVI+DTAGRL +D+ +M ELKD++
Sbjct: 152 LGKQISIPVFSMGTDQSPVEIARRAMEEAEKEHNDVVIIDTAGRLHVDEKLMQELKDIRE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P EV LVVDAMTGQ+A + +F+ IGITG +LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 LTKPDEVFLVVDAMTGQDAVNVAKSFDEMIGITGVVLTKLDGDTRGGAALSIRSVTEKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ LEPF+P+RMA RILGMGDV+S +EKAQE + +E A+E+++K+ + +F
Sbjct: 272 KFVGMGEKMDALEPFHPERMASRILGMGDVMSLIEKAQENVDEEKAKELEQKLRTQSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL Q + V +MG + ++ M+PG KI A+V E + + +EA+I +MT ERE
Sbjct: 332 DDFLDQLQQVKKMGPLDEILKMMPGANKIKGLDNAKVDEGQ--MGRVEAVIYSMTLAERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
P+++ S R+KR+A SG + Q+V++L+ Q +M+ +K +
Sbjct: 390 SPDIINAS--RKKRIAVGSGTSIQEVNRLLKQFEEMKKMVKQM 430
>gi|269836377|ref|YP_003318605.1| signal recognition particle protein [Sphaerobacter thermophilus DSM
20745]
gi|269785640|gb|ACZ37783.1| signal recognition particle protein [Sphaerobacter thermophilus DSM
20745]
Length = 504
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/400 (50%), Positives = 288/400 (72%), Gaps = 3/400 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++RRALLEADV+ VVR FV AV E+AVG +++ + P QQ++ IVRDEL+K++G E
Sbjct: 31 MREVRRALLEADVNYKVVRDFVSAVRERAVGEEVLKALTPAQQVISIVRDELIKILGEER 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A+ PT++++ GLQG GKTT AK+AN LKK+G+ ++VA DVYRPAAIDQL L
Sbjct: 91 VPLQLAQVPPTIVMVVGLQGSGKTTHVAKIANLLKKEGRRPLMVAADVYRPAAIDQLQTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPVY+ GT+ P IAK ++ A+ + VV++DTAGRLQID+ MM E++ +
Sbjct: 151 GGQIDVPVYSEGTKANPVDIAKNAVKLARDRGYTVVLIDTAGRLQIDEPMMQEVERIAEA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLV DAMTGQEA + F+ + +TG +LTK+DGD+RGGAALS++ V G PIK
Sbjct: 211 VKPHEILLVADAMTGQEAVNVAQEFHRRLALTGLVLTKMDGDARGGAALSIRSVVGVPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GER++ +EPFYPDR+A RILGMGDVL+ +E+AQ + +E++ +++K+++ F+F
Sbjct: 271 YIGTGERIDAVEPFYPDRLASRILGMGDVLTLIERAQAEITEEESRALEEKVLAGQFNFE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL Q + + RMG +++++ MIPG+G+ + QV+ ++ K +EAMI +MTPEER P+
Sbjct: 331 DFLNQLQQIKRMGPLTQLLEMIPGIGQALRQQQVQISDDEFKHIEAMIFSMTPEERRNPD 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+L P RRKR+A SG + QV+QLV Q QM+ M
Sbjct: 391 IL--KPSRRKRIAAGSGTSVAQVNQLVNQFKQMQKMMAQF 428
>gi|188585994|ref|YP_001917539.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350681|gb|ACB84951.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Natranaerobius thermophilus JW/NM-WN-LF]
Length = 447
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/392 (52%), Positives = 287/392 (73%), Gaps = 3/392 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+AVG ++ + P QQ++KIVRDEL +LMGGEV
Sbjct: 31 MREVRLALLEADVNYKVVKEFVNNVKERAVGEEVLESLTPGQQVIKIVRDELTQLMGGEV 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SE+ F+ PTVI+L+GLQG GKTT SAKLA KK GK+ ++VA D RPAAI QL +L
Sbjct: 91 SEVNFSDQPPTVIMLSGLQGTGKTTASAKLAKKFKKDGKNPLMVACDTQRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ +PV++ G + P+ IAK +E AKK +DVVI+DTAGRL ID+ +M EL++V+
Sbjct: 151 GEQTDIPVFSMGDKQHPADIAKGAVEHAKKNQMDVVILDTAGRLHIDEDLMTELREVESS 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + F+ ++ ++G ++TKLDGD+RGGAALSVK+V+GKPIK
Sbjct: 211 VEPHEILLVVDAMTGQDAVNVAERFDQDLDLSGIVMTKLDGDTRGGAALSVKKVTGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++++LE F+PDR+A RILGMGDV+S +EKA+ M Q+ A+E++KKI S +F F
Sbjct: 271 FIGTGEKVDELEVFHPDRLASRILGMGDVMSLIEKAETSMDQKKAQELEKKIKSQSFTFE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q + + MG + +++ M+PGM G E+ L +EA+I++MT EER KPE
Sbjct: 331 DFLEQLQQLKSMGPLDQIMDMMPGMAGNKKMKNFSVDEQELVKIEAIIQSMTQEERVKPE 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 391
++ S R+KR+A+ SG Q V++L+ Q Q
Sbjct: 391 VINSS--RKKRIAKGSGTRVQDVNKLLKQFEQ 420
>gi|404418469|ref|ZP_11000236.1| signal recognition particle protein [Staphylococcus arlettae
CVD059]
gi|403489062|gb|EJY94640.1| signal recognition particle protein [Staphylococcus arlettae
CVD059]
Length = 454
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 295/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VS++A+G +++ + P QQ++KIV+DEL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKTVSDRALGSDVMKSLTPGQQVIKIVQDELTQLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S + A PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAIDQL
Sbjct: 92 STITMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPVY+ G +VKP +I + L+ AK++++D VI+DTAGRL ID+A+MDEL+DVK
Sbjct: 152 VGKQLDVPVYSEGDQVKPQEIVENALQHAKEEHLDFVIIDTAGRLHIDEALMDELQDVKT 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDAMTGQDAVNVAQSFDEQLEVSGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LEPF+P+RMA RILGMGDVLS +EKAQ+ + Q+ A+++++K+ S++F
Sbjct: 272 KFVGMSEKLDGLEPFHPERMASRILGMGDVLSLIEKAQQDVDQDKAKDLEQKMRSSSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ + +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKSLGPLDDIMKMIPGMNKMKGLDNLNMSEKQIDHIKAIIQSMTPNERNDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
L S R+KR+A+ SG++ Q+V++L+ Q +M+ MK
Sbjct: 392 NTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNEMKKMMKQF 430
>gi|373954810|ref|ZP_09614770.1| signal recognition particle protein [Mucilaginibacter paludis DSM
18603]
gi|373891410|gb|EHQ27307.1| signal recognition particle protein [Mucilaginibacter paludis DSM
18603]
Length = 442
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/400 (51%), Positives = 279/400 (69%), Gaps = 5/400 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++IR+ALL+ADV+ + F V ++A+G ++ + P Q L KI+ DEL +LMGG
Sbjct: 31 MKEIRKALLDADVNYKTAKAFTDDVRQKALGQNVLTSISPGQLLTKIMNDELTQLMGGST 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVI 119
+EL F + PT+IL+AGL G GKTT + KLAN+LK Q GK +LVAGDVYRPAAI+QL +
Sbjct: 91 AELNFPAT-PTIILIAGLNGAGKTTFTGKLANFLKTQKGKKPLLVAGDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+GVPVY P IA++G+ AK+ +VVIVDTAGRL ID+AMM E++ VK
Sbjct: 150 LGEQIGVPVYANLESKDPIAIAREGVALAKQNGNNVVIVDTAGRLSIDEAMMVEIEQVKA 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
LNP E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAALS+K V KPI
Sbjct: 210 ALNPHEILFVVDSMTGQDAVNTAKVFNDRLDFTGVVLTKLDGDTRGGAALSIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME L+ F+PDRMA RILGMGDV+S VE+AQ+ ++ A E+QKKI FDF
Sbjct: 270 KFIGTGEKMEALDVFHPDRMASRILGMGDVVSLVERAQQQFDEKQAAELQKKIRKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG+M ++GMIPG+GK V + + K +EA+I++MTP E+E P+
Sbjct: 330 NDFYGQIQQIKKMGNMKDLMGMIPGVGKAMK-DVEIDDNAFKAIEAIIQSMTPFEKENPD 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ +S RR R+A SG Q+V++L+ Q MR MK +
Sbjct: 389 SINQS--RRNRIANGSGTNLQEVNRLIKQFDDMRKVMKQM 426
>gi|354584950|ref|ZP_09003841.1| signal recognition particle protein [Paenibacillus lactis 154]
gi|353191067|gb|EHB56576.1| signal recognition particle protein [Paenibacillus lactis 154]
Length = 459
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/418 (49%), Positives = 294/418 (70%), Gaps = 5/418 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+A+G ++ P ++ IV EL +LMGG
Sbjct: 32 MREVRLALLEADVNFKVVKDFVAKVKEKAIGKEVMDSFTPGMVIIDIVNKELTELMGGTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L + PTVI++AGLQG GKTT S KLA L+KQ +LVAGD+YRPAAI QL +L
Sbjct: 92 SKLAKSSKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNSRPLLVAGDIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV++ G + P +IAKQGL+ AK D VI+DTAGRL +D+ +M+ELK +
Sbjct: 152 GEQIKVPVFSLGDKTSPVEIAKQGLQHAKDNGHDYVIIDTAGRLHVDEELMEELKQIHSA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 VNPDEVLLVVDAMTGQDAVNVAESFNQQLTLTGVVLTKLDGDTRGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + E A+EM++K+ +A F F
Sbjct: 272 FAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQSNIDAEKAKEMERKMRNAEFTFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V ++G + +++ MIPGMGK+ A+ ++ EK + +EA++ +MT EE+++P+
Sbjct: 332 DFLEQMEQVKKLGPLDQLMDMIPGMGKMKQAKDLKVDEKQMGRIEAIVHSMTTEEKQQPD 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALSNLE 415
++ + RRKR+A SG + +V++L+ Q +MR MK +M +GG AL L+
Sbjct: 392 IINHN--RRKRIAAGSGTSLAEVNRLIKQFDEMRRVMKQFSDMMGPKGGKNKALKQLK 447
>gi|291542195|emb|CBL15305.1| signal recognition particle subunit FFH/SRP54 (srp54) [Ruminococcus
bromii L2-63]
Length = 469
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/399 (51%), Positives = 288/399 (72%), Gaps = 4/399 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ V + F V+E+AVG +++ + P Q +VKIV +EL LMGGE
Sbjct: 32 MREVRLALLEADVNYKVAKDFTNKVTERAVGQDVMQSLTPAQMVVKIVDEELTSLMGGED 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ + FA PTVI++ GLQG GKTT +AKLA LKKQG++ +L A DVYRPAAIDQL ++
Sbjct: 92 ARIEFASKPPTVIMMCGLQGSGKTTHTAKLAKMLKKQGRNPLLAACDVYRPAAIDQLKVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE+ GVPV+ G + P +IAK+ ++ AK DVVI+DTAGRL ID+A+MDELK++K+
Sbjct: 152 GEKAGVPVFEMG-KANPVKIAKEAIKRAKDYGNDVVILDTAGRLHIDEALMDELKNIKKE 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLV+D+MTGQ+A + +FN + ITG ILTKLDGD+RGGAALSVK V+G+PIK
Sbjct: 211 VEPNEILLVIDSMTGQDAVNVAKSFNELLDITGVILTKLDGDTRGGAALSVKAVTGRPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++D+E F+PDRMA RILGMGDVL+ +E AQ M E AEEM +K+MS FDFN
Sbjct: 271 FAGTGEKLDDIEVFHPDRMASRILGMGDVLTLIEDAQNKMDAEKAEEMAQKMMSNKFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
D Q V +MG + ++ IPG+GK V ++ + ++A+I +MTPEER P +
Sbjct: 331 DLYDQFEQVKKMGPLKGILSKIPGVGKQLEG-VDIDDRQIDWVQAIILSMTPEERSHPHI 389
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ +P R++R+A SG++ ++V++L+ Q+ QM+ M+ +
Sbjct: 390 M--NPSRKRRIAAGSGRSIEEVNRLIKQIDQMQKMMRQM 426
>gi|289423976|ref|ZP_06425768.1| signal recognition particle protein [Peptostreptococcus anaerobius
653-L]
gi|429728356|ref|ZP_19263082.1| signal recognition particle protein [Peptostreptococcus anaerobius
VPI 4330]
gi|289155612|gb|EFD04285.1| signal recognition particle protein [Peptostreptococcus anaerobius
653-L]
gi|429149855|gb|EKX92817.1| signal recognition particle protein [Peptostreptococcus anaerobius
VPI 4330]
Length = 452
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/422 (49%), Positives = 294/422 (69%), Gaps = 11/422 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F++ V E+ +G +++ + P Q +VKIV +EL LMG
Sbjct: 32 MREVKMALLEADVNFKVVKDFIKVVQERCIGEDVMKSLTPGQMVVKIVNEELTALMGDVQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ F+ PTVI++ GLQG GKTT S KLA YLK QGK+ +LVAGDVYRPAAI QL ++
Sbjct: 92 SKISFSSKSPTVIMMVGLQGAGKTTTSGKLAGYLKGQGKNPLLVAGDVYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE++ + V+T G +V P IAK LE A K D+VI+DTAGRL +D+ +M ELKD+K V
Sbjct: 152 GEKLDIEVFTLGDKVSPVDIAKAALEHANKNKNDLVIIDTAGRLHVDEVLMQELKDIKSV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAMTGQ+A + +F+ +GI G +LTK+DGD+RGGAALS++ V+ KPIK
Sbjct: 212 ARPQEILLVVDAMTGQDAVNVAESFDTALGIDGVVLTKMDGDTRGGAALSIRAVTKKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++++EPFYPDRMA RILGMGDVL+ +EKAQ + E A+E++ K+ DF
Sbjct: 272 FVGMGEKLDNIEPFYPDRMASRILGMGDVLTLIEKAQSSLDMEKAKELEAKMRKNEMDFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMTPEEREK 357
DFL Q + ++GS+ +++ MIPGMG + AQ+ + E K LK +A+I++MT +ER
Sbjct: 332 DFLNQLEQIQKIGSIDKIMDMIPGMGGMK-AQMGDMEKGKKELKKTKAIIQSMTVKERRN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGVMEGGSLPALS 412
P +L S R+KR+A+ S T V++L+ Q +M+ MK N+MG M+ G P L
Sbjct: 391 PSILNAS--RKKRIARGSATTVADVNRLIKQFNEMKKMMKMFQSGNMMGKMKKGGFPKLP 448
Query: 413 NL 414
L
Sbjct: 449 KL 450
>gi|326803882|ref|YP_004321700.1| signal recognition particle protein [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650579|gb|AEA00762.1| signal recognition particle protein [Aerococcus urinae
ACS-120-V-Col10a]
Length = 491
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/416 (47%), Positives = 293/416 (70%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ V ++A+ ++ + P QQ+VKIV +EL +L+GGE
Sbjct: 32 MREVRLALLEADVNFKVVKNFVRKVQDKALNSDVLESLSPTQQIVKIVDEELTELLGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVI 119
+ + ++ PT+I++AGLQG GKTT KLAN+L+++ + +LVA DVYRPAAIDQL
Sbjct: 92 VGINYNEAGPTIIMMAGLQGAGKTTTVGKLANHLREEDHRKPLLVAADVYRPAAIDQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G Q+ +PV+ G +V P IA++ + AK+ N D + +DTAGRLQID+ +MDELK+++
Sbjct: 152 IGRQLDLPVFQLGNQVSPVDIAQKAVAYAKENNYDTIFIDTAGRLQIDQTLMDELKNIQA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E+LL VDAM+GQEAA + TF+ E+ +TG +LTKLDGD+RGGAALS+ ++GKPI
Sbjct: 212 AVHPDEILLTVDAMSGQEAANVAKTFDEELELTGVVLTKLDGDTRGGAALSIASITGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE++ED+E FYPDRM+ RILGMGD+++ +EKAQ+ +++AEEM K+ + +DF
Sbjct: 272 KFTGVGEKLEDIETFYPDRMSNRILGMGDMMTLIEKAQKEFDEKEAEEMAAKMQANTYDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPEEREKP 358
NDF+KQ + +MGS +I MIPG+ KI P + K + +A+I++MT ER P
Sbjct: 332 NDFVKQMDQMNKMGSFESIIKMIPGLNKILPVDKLNIDPKDMVRTKAIIQSMTDYERTHP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+ + +S RR+R+A+ S T QV+QL+ Q Q R +M M G + +LS+L
Sbjct: 392 DEINQS--RRRRIAKGSATTVNQVNQLIKQFNQSRT----MMSAMTNGDMSSLSSL 441
>gi|402836125|ref|ZP_10884675.1| signal recognition particle protein [Mogibacterium sp. CM50]
gi|402272137|gb|EJU21360.1| signal recognition particle protein [Mogibacterium sp. CM50]
Length = 447
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/401 (50%), Positives = 282/401 (70%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV++FV + ++A+G +++ + P QQ++KIV++ELV +MGG
Sbjct: 32 MREVKLALLEADVNFKVVKQFVATIKDKAMGADVLKSLTPGQQVLKIVKEELVDMMGGAN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L ++ S TV ++ GLQG GKTT KLA +LK+ GK ML A DVYRPAAIDQL ++
Sbjct: 92 SKLTYSPSGFTVYMMVGLQGTGKTTTCGKLAAWLKQNGKKPMLCACDVYRPAAIDQLEVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+ V PV+T +P IAK +EEAK+K +V+IVDTAGRLQID+A+MDEL +K+
Sbjct: 152 GKAVNTPVFTMRESNEPLAIAKAAVEEAKRKGCNVLIVDTAGRLQIDEALMDELVQLKKG 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LL VDA+TGQ+A + FN +GI G I+TK+DGDSRGGAALS K V+GKPIK
Sbjct: 212 IRPHEILLAVDALTGQDAVNIAAGFNETLGIDGIIMTKMDGDSRGGAALSTKMVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+ LEPF+PDR+A RILGMGDV+S +E+A+ +E+A M++K FD N
Sbjct: 272 FMGTGEKYNALEPFHPDRIASRILGMGDVMSLIEQAENAYSEEEAARMEEKFRKNQFDLN 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQV--REAEKSLKIMEAMIEAMTPEEREKP 358
DFL Q + RMG ++++I MIPG+ Q+ + +K L M+A+I++MT EERE P
Sbjct: 332 DFLNQMGQINRMGGIAKLIDMIPGISAADKKQIDFEKGKKDLDRMKAIIQSMTNEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+L S RRKR+A SG+T Q ++QL+ Q QM+ +K
Sbjct: 392 NILNAS--RRKRIAAGSGQTVQSINQLIKQFDQMKAMIKQF 430
>gi|20807909|ref|NP_623080.1| Signal recognition particle GTPase [Thermoanaerobacter
tengcongensis MB4]
gi|20516476|gb|AAM24684.1| Signal recognition particle GTPase [Thermoanaerobacter
tengcongensis MB4]
Length = 447
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/397 (51%), Positives = 281/397 (70%), Gaps = 2/397 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+ +V+E+A+G ++ + P QQ++KIV +EL+KLMG
Sbjct: 33 MREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESLTPAQQVIKIVHEELIKLMGSVE 92
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L P VI++ GLQG GKTT KLAN LKKQGK+ +LVA D RPAAI QL +L
Sbjct: 93 SRLNLGSKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACDTVRPAAIKQLQVL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G + VPV+T G +V + IAK ++ AK NVDVVI+DTAGRL ID +M+EL +K
Sbjct: 153 GANINVPVFTMGDKVDTADIAKASIDYAKSHNVDVVIIDTAGRLHIDDELMEELVRIKEA 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P E+LLV DAMTGQ+A + ++FN + ITG ILTKLDGD+RGGAALS+K V+ KPIK
Sbjct: 213 VHPDEILLVADAMTGQDAVNVASSFNERLDITGVILTKLDGDTRGGAALSIKAVTQKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++ D+EPFYPDRMA RILGMGDVL+ +EKAQ + ++ A EM +KI+S F
Sbjct: 273 YVGIGEKLGDIEPFYPDRMASRILGMGDVLTLIEKAQAAIDEKKALEMGQKILSKQFTLE 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q R++ MG + +++ MIPG+ K V +EK LK +EA+I +MT EER+ P +
Sbjct: 333 DFLEQLRSLKNMGPLDQLLAMIPGVNKSVLKNVEVSEKDLKRIEAIILSMTKEERQNPSI 392
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
+ S R++R+A+ SG T Q+V+ L+ Q + + MK
Sbjct: 393 INGS--RKRRIARGSGTTIQEVNNLLKQFEETKKMMK 427
>gi|397904685|ref|ZP_10505586.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Caloramator australicus RC3]
gi|397162281|emb|CCJ32920.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Caloramator australicus RC3]
Length = 459
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/401 (51%), Positives = 283/401 (70%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+ V+E+A+G ++ + P QQ++KIV +E++KLMG
Sbjct: 32 MREVKLALLEADVNYKVVKDFINVVTERAIGQEVMESLTPAQQVIKIVHEEMIKLMGSTE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ + PTVI+L GLQG GKTT++AKLA +L+K K +LVA D+YRPAAI QL IL
Sbjct: 92 SKINISPKPPTVIMLVGLQGAGKTTMAAKLALHLRKNNKHPLLVAADIYRPAAIKQLQIL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ +PV+T G +V P IAK LE AKK D+VI+DTAGRL ID+ +M EL+ +K+
Sbjct: 152 GGQIDIPVFTLGDKVNPVDIAKASLEYAKKNAKDIVIIDTAGRLHIDEELMLELEGIKKE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+LLVVDAMTGQ+A + +FN ++ ITG ILTKLDGD+RGGAALSVK V+GKPIK
Sbjct: 212 VNPDEILLVVDAMTGQDAVNVAQSFNDKLDITGVILTKLDGDTRGGAALSVKAVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ DLE FYPDRMA RILGMGD+LS +EKAQ+ + ++ A EMQ+K+ F
Sbjct: 272 YAGVGEKLSDLEIFYPDRMASRILGMGDILSLIEKAQQAIDEKKALEMQQKLERQEFTLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM--GKITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL Q + + ++G + +I MIPG+ K+ E EK + +EA+I++MT EER P
Sbjct: 332 DFLDQMQQMKKLGPLKDLIKMIPGLDTSKLDDIDFEENEKEMAKIEAIIKSMTKEERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ S R+KR+A+ SG T Q V++L+ Q R MK
Sbjct: 392 SIINSS--RKKRIAKGSGTTIQDVNKLLNNFEQARKMMKQF 430
>gi|423335535|ref|ZP_17313310.1| signal recognition particle protein [Lactobacillus reuteri ATCC
53608]
gi|337728765|emb|CCC03884.1| signal recognition particle protein [Lactobacillus reuteri ATCC
53608]
Length = 481
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/419 (49%), Positives = 287/419 (68%), Gaps = 13/419 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A G +++G+ P QQ+VKIV DEL KLMG E
Sbjct: 32 MREIRLALLEADVNFKVVKDFVKTVREKAAGAEVLKGLNPAQQIVKIVNDELTKLMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++ GLQG GKTT + KLA LK + + M +A DVYRPAAI QL
Sbjct: 92 VPLNKAPHIPTVIMMVGLQGAGKTTTAGKLALRLKNENHARPMFIAADVYRPAAITQLQQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ +Q+ VPV+ GT+V P +I ++G+E AKK + D VI+DTAGRLQID+ +MDEL ++K
Sbjct: 152 VADQIDVPVFEKGTDVDPVEIVREGMEVAKKNHNDYVIIDTAGRLQIDEQLMDELANIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++NP E+LLV+D+MTGQ A F+ ++ ITG ILTKLDGD+RGGAA+S++ V+GKPI
Sbjct: 212 LVNPNEILLVIDSMTGQNAVNTAQGFDDKLNITGVILTKLDGDTRGGAAMSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E K+ FD+
Sbjct: 272 KFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETMDKMRENTFDY 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q V +MG + +I M+PGM PA + K + A++ +MTPEERE
Sbjct: 332 NDFLAQMDQVTKMGPLENIIKMMPGMAN-NPALKNLNLDPKQFAHIRAIVLSMTPEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-------NLMGVMEGGSLP 409
P+L+ +P RR+R+A +G+ +V++++ Q QMR MK N M M GG +P
Sbjct: 391 PDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQVTNGNFNGMQNMFGGQMP 447
>gi|332981635|ref|YP_004463076.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mahella
australiensis 50-1 BON]
gi|332699313|gb|AEE96254.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mahella
australiensis 50-1 BON]
Length = 438
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/406 (49%), Positives = 291/406 (71%), Gaps = 3/406 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRD+R ALLEADV+ VV+ FV V+E+A+G G++ + P QQ++KIV ++L++LMG
Sbjct: 27 MRDVRMALLEADVNYAVVKEFVNKVTEKAIGQGVLESLTPGQQVIKIVNEQLIELMGSSQ 86
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ +A + PTVI++ GLQG GKTT SAKLA YL KQGK+ +LVA D+YRPAA+ QL I+
Sbjct: 87 SKIKWASAPPTVIMMVGLQGSGKTTTSAKLAGYLAKQGKNPLLVACDIYRPAAVKQLQIV 146
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G++V +PV++ P I++Q LE AKK + DVVI+DTAGRL ID MM EL+D+K
Sbjct: 147 GQKVNIPVFSL-EGANPVAISQQALEYAKKHSNDVVILDTAGRLHIDDEMMQELEDIKSS 205
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P E+LLVVDAMTGQ+A + FN + I G +LTKLDGD+RGGAALSVK V+GKPIK
Sbjct: 206 VHPDEILLVVDAMTGQDAVNVAKNFNERLAIDGVVLTKLDGDTRGGAALSVKAVTGKPIK 265
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++DLEPF+PDR+A RILGMGDVL+ +EKAQ + ++ A E++ K+ + F
Sbjct: 266 FVGMGEKLDDLEPFHPDRIASRILGMGDVLTLIEKAQAAVDEKKAMELENKLRNQQFTLE 325
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + +MG +S+++ M+PG+ +++ +K L +EA+I +MT +ER +P +
Sbjct: 326 DFLDQLHEIKKMGPLSQIMDMLPGINAKKMGKIQVDDKELGRIEAIINSMTKQERREPAI 385
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
+ S RR+R+A+ SG T Q+V++L+ Q + + M+ + + G
Sbjct: 386 INGS--RRRRIAKGSGTTIQEVNRLLKQFEETKRLMRQFTSMEKSG 429
>gi|210622533|ref|ZP_03293226.1| hypothetical protein CLOHIR_01174 [Clostridium hiranonis DSM 13275]
gi|210154168|gb|EEA85174.1| hypothetical protein CLOHIR_01174 [Clostridium hiranonis DSM 13275]
Length = 453
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/408 (49%), Positives = 288/408 (70%), Gaps = 7/408 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F++ V E+ VG +++ + P Q ++KIV +EL LMG
Sbjct: 32 MREVKLALLEADVNFKVVKDFIKKVQERCVGQEVMKSLTPGQHVIKIVNEELTALMGDVQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+++ + PTVI++ GLQG GKTT + KL Y KKQGK +LVA DVYRPAAI QL ++
Sbjct: 92 SKIMISSKPPTVIMMVGLQGAGKTTTAGKLGGYFKKQGKKPLLVACDVYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE++ +PV+ G + P IAK GL A+K D+VI+DTAGRL +D+ +M+ELK++K
Sbjct: 152 GEKLDIPVFAMGDKENPVNIAKAGLSHAQKNGNDMVIIDTAGRLHVDEVLMEELKNIKSE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LL VDAMTGQ+A + +FN +GI G +LTKLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VRPHEILLTVDAMTGQDAVNVAESFNDALGIDGVVLTKLDGDTRGGAALSIRAVTKKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++EDLEPF+PDRMA RILGMGDVLS +EKAQE + E A+E++KK+ FDF
Sbjct: 272 FIGMGEKLEDLEPFHPDRMASRILGMGDVLSLIEKAQEAVDIEKAKELEKKMRKQEFDFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE----KSLKIMEAMIEAMTPEERE 356
D L Q + +MGSM +++GM+PGM + Q+ + + K +K A+I++MT EER
Sbjct: 332 DLLDQFEQLKKMGSMDKLLGMMPGMANMK-NQIGDVDLQNNKDMKRSMAIIQSMTVEERR 390
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 404
P +L S R+KR+A+ SG + Q+V++L+ QL +M+ MK G+ +
Sbjct: 391 NPSILNAS--RKKRIAKGSGTSVQEVNRLIKQLNEMKKMMKMFTGMTQ 436
>gi|261419395|ref|YP_003253077.1| signal recognition particle protein [Geobacillus sp. Y412MC61]
gi|261375852|gb|ACX78595.1| signal recognition particle protein [Geobacillus sp. Y412MC61]
Length = 469
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/391 (51%), Positives = 288/391 (73%), Gaps = 4/391 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFIRQVSERAVGQEVMKSLTPGQQVIKIVKEELTALMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTV+++ GLQG GKTT + KLAN L+K + +LVA DVYRPAAI QL
Sbjct: 92 SQIAVAKKPPTVVMMVGLQGAGKTTTTGKLANLLRKRHNRKPLLVAADVYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G P +IAKQ LE AK+++ D V++DTAGRL ID+A+MDELK +K
Sbjct: 152 LGKQLDMPVFSLGEHANPVEIAKQALERAKEEHYDYVLIDTAGRLHIDEALMDELKQMKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V+G PI
Sbjct: 212 AVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +A F
Sbjct: 272 KFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRTATFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V ++G + +I M+PG KI A ++ EK + +EA+I +MT EE+ P
Sbjct: 332 DDFLEQLGQVRKLGPLDELIKMLPGANKIKGLANIQVDEKQIARVEAIIRSMTKEEKTHP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
E++ S R+KR+A+ SG T Q+V++L+ Q
Sbjct: 392 EIINAS--RKKRIAKGSGTTVQEVNRLLKQF 420
>gi|402308286|ref|ZP_10827295.1| signal recognition particle protein [Prevotella sp. MSX73]
gi|400375730|gb|EJP28625.1| signal recognition particle protein [Prevotella sp. MSX73]
Length = 447
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/402 (51%), Positives = 280/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M+D+RRALL+ADV+ V + F V E+A+G+ ++ V+P Q +VK+V DEL +LMGGE
Sbjct: 31 MKDVRRALLDADVNFKVAKNFTNTVKEKALGMNVLTAVKPGQLMVKLVHDELAELMGGED 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ LV K+RP +IL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAIDQL +
Sbjct: 91 APLVL-KNRPAIILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAIDQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGVPVY IA L+EAK KN DVVI+DTAGRL +D+ MM E+ ++K+
Sbjct: 150 VGEQVGVPVYAEPDNKDVIAIAANALKEAKAKNYDVVIIDTAGRLAVDEQMMTEISNLKQ 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A +QKKI FDF
Sbjct: 270 KFIGTGEKMEAIDVFHPARMADRILGMGDVVSLVERAQEQFDEEEARRLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK V + + K +E++I++MTP+ER PE
Sbjct: 330 NDFLNQIEQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIESIIKSMTPKERSNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S RR+R+A+ SG Q V++L+ Q Q R MK + G
Sbjct: 389 ILNSS--RRQRIAKGSGTNIQDVNRLIKQFDQTRKMMKMVTG 428
>gi|221633791|ref|YP_002523017.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
gi|221156000|gb|ACM05127.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
Length = 488
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/407 (50%), Positives = 293/407 (71%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++RRALLEADV VVR F+ AV E+A+G ++R + P QQ++ IV ELV+++G E
Sbjct: 31 LREVRRALLEADVHYTVVRDFIAAVRERAIGEEVLRSLTPAQQVIAIVHQELVRVLGSER 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L++A PT+I+L GLQG GKTT AKL +L+K+G+ +LVA D+YRPAA++QL L
Sbjct: 91 VPLLWASQPPTIIMLVGLQGSGKTTQVAKLGYHLRKEGRRPLLVAADIYRPAAVEQLRTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q +PVY GT+V P + K ++ A+ + + VI+DTAGRLQID+ MM EL+ +
Sbjct: 151 GKQHDLPVYDEGTKVDPVETVKHAVKVARDQGYNPVIIDTAGRLQIDEPMMQELERMAEA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ PTE+LLV DAMTGQEA + F+ + +TG ILTKLDGD+RGGAALS++ V G PIK
Sbjct: 211 VRPTEILLVADAMTGQEAVNVAKEFHRRLSLTGLILTKLDGDARGGAALSIRAVVGVPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GER++ LEPFYPDR+A RILGMGDVLS +EKAQ+ + QE+ +++Q+K+++ FD
Sbjct: 271 FIGTGERVDALEPFYPDRLATRILGMGDVLSLIEKAQQQISQEEGKKLQEKLLAGTFDLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q + V +MG +++++ MIPGMG++ QV+ ++ K +EA+I +MTPEER P+
Sbjct: 331 DFLRQLQQVKKMGPLTQLLEMIPGMGQLLRQQQVQISDDEYKRIEAIILSMTPEERRNPD 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
++ S RR+R+AQ SG T +VSQL+ Q QM+ RM +G + G
Sbjct: 391 IINYS--RRRRIAQGSGTTIAEVSQLLTQFKQMQ-RMMAELGQLAAG 434
>gi|409196181|ref|ZP_11224844.1| signal recognition particle protein [Marinilabilia salmonicolor JCM
21150]
Length = 443
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/398 (51%), Positives = 281/398 (70%), Gaps = 5/398 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++DIRRALL+ADV+ + F + V ++A+G ++ V+P Q +VKIV DEL LMGG
Sbjct: 31 LKDIRRALLDADVNFKTAKSFTETVKDKALGQNVLNAVKPQQMMVKIVHDELADLMGGSS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+++ K P VIL++GLQG GKTT + KLAN +K K+GK +LVAGDVYRPAAI+QL +
Sbjct: 91 TDIEL-KGNPAVILISGLQGSGKTTFTGKLANLIKSKRGKQPLLVAGDVYRPAAINQLQV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+GVPVYT P ++AK G++EAK K DVVI+DTAGRL ID+ MM+E+ +K+
Sbjct: 150 LGEQIGVPVYTEEGNTDPVKLAKDGIKEAKSKGHDVVIIDTAGRLAIDEEMMNEISAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAA+S++ V KPI
Sbjct: 210 AVNPHETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAISIRSVVDKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ L+ F+P RMA RILGMGD++S VEKAQE E+A+++QKKI F+F
Sbjct: 270 KFVGMGEKMDALDVFHPSRMADRILGMGDIVSLVEKAQEQYDSEEAQKLQKKIAKNQFNF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFL Q + + +MG++ + MIPGMGK+ V + + K +EA+I +MTPEER++P
Sbjct: 330 DDFLSQIKQIKKMGNLKDLAAMIPGMGKMLK-NVDIDDDAFKGVEAIISSMTPEERQQPT 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
L+ S RRKR+A SG + Q+V++L+ Q R M+
Sbjct: 389 LINGS--RRKRIATGSGTSIQEVNRLMKQFEDTRKAMR 424
>gi|422419418|ref|ZP_16496373.1| signal recognition particle protein, partial [Listeria seeligeri
FSL N1-067]
gi|313632786|gb|EFR99746.1| signal recognition particle protein [Listeria seeligeri FSL N1-067]
Length = 427
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 294/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 9 MREVRLALLEADVNFKVVKQFIKTVSERAVGTDVMKSLTPGQQVIKIVQEELTNLMGGEE 68
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 69 SKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 128
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+ ++D VI+DTAGRL ID+ +MDELK VK
Sbjct: 129 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEDHLDYVIIDTAGRLHIDETLMDELKQVKE 188
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NPTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 189 IANPTEILLVVDSMTGQDAVNVAESFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPI 248
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K V GE+ME +E F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ +
Sbjct: 249 KFVATGEKMEAIETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKDNSMTL 308
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I++MT E++ P
Sbjct: 309 DDFLDQLQQVKQMGPLDELLKMMPGAGKMKGLDNMQVDDKQLGHIEAIIKSMTKNEKDNP 368
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 369 DIINAS--RRKRIARGSGRPIQEINRLLKQFTEMKKMMKQM 407
>gi|374603417|ref|ZP_09676397.1| signal recognition particle protein [Paenibacillus dendritiformis
C454]
gi|374391013|gb|EHQ62355.1| signal recognition particle protein [Paenibacillus dendritiformis
C454]
Length = 457
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/404 (50%), Positives = 286/404 (70%), Gaps = 3/404 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F+ V E+AVG +++ P +V IV EL +LMGG
Sbjct: 32 MREVRLALLEADVNFKVVKEFINKVKEKAVGQEVMKSFTPGMVIVDIVNKELTELMGGTA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L A PTVI++AGLQG GKTT S KLA L+KQ +LVA D+YRPAAI QL +L
Sbjct: 92 AKLAKANKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNHKPLLVAADIYRPAAIKQLEVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV++ G +V P +IA+Q +E A+ ++D VIVDTAGRL ID+A+M+ELK +
Sbjct: 152 GAQINVPVFSLGDQVSPVEIARQAMEHARANHLDYVIVDTAGRLHIDEALMEELKQIHET 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 VNPDEVLLVVDAMTGQDAVNVAESFNQQLALTGVVLTKLDGDTRGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + + A+EM+ K+ +A F F+
Sbjct: 272 FAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQANIDADKAKEMEMKMRNAAFTFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q + V ++G + +++ MIPGM K+ A ++ E+ + +EA++ +MT EER+ P+
Sbjct: 332 DFLEQMQQVKQLGPIDQILDMIPGMNKMKQTANLKVDERQMGRIEAIVRSMTNEERQDPD 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 403
L+ S RRKR+A SG + V++L+ Q +MR MK +M
Sbjct: 392 LINHS--RRKRIAAGSGTSLADVNRLIKQFDEMRRMMKQFTEMM 433
>gi|56419731|ref|YP_147049.1| signal recognition particle GTPase [Geobacillus kaustophilus
HTA426]
gi|297530628|ref|YP_003671903.1| signal recognition particle protein [Geobacillus sp. C56-T3]
gi|319766210|ref|YP_004131711.1| signal recognition particle protein [Geobacillus sp. Y412MC52]
gi|448237352|ref|YP_007401410.1| signal recognition particle protein [Geobacillus sp. GHH01]
gi|56379573|dbj|BAD75481.1| signal recognition particle GTPase [Geobacillus kaustophilus
HTA426]
gi|297253880|gb|ADI27326.1| signal recognition particle protein [Geobacillus sp. C56-T3]
gi|317111076|gb|ADU93568.1| signal recognition particle protein [Geobacillus sp. Y412MC52]
gi|445206194|gb|AGE21659.1| signal recognition particle protein [Geobacillus sp. GHH01]
Length = 446
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/391 (51%), Positives = 288/391 (73%), Gaps = 4/391 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFIRQVSERAVGQEVMKSLTPGQQVIKIVKEELTALMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTV+++ GLQG GKTT + KLAN L+K + +LVA DVYRPAAI QL
Sbjct: 92 SQIAVAKKPPTVVMMVGLQGAGKTTTTGKLANLLRKRHNRKPLLVAADVYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G P +IAKQ LE AK+++ D V++DTAGRL ID+A+MDELK +K
Sbjct: 152 LGKQLDMPVFSLGEHANPVEIAKQALERAKEEHYDYVLIDTAGRLHIDEALMDELKQMKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V+G PI
Sbjct: 212 AVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +A F
Sbjct: 272 KFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRTATFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V ++G + +I M+PG KI A ++ EK + +EA+I +MT EE+ P
Sbjct: 332 DDFLEQLGQVRKLGPLDELIKMLPGANKIKGLANIQVDEKQIARVEAIIRSMTKEEKTHP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
E++ S R+KR+A+ SG T Q+V++L+ Q
Sbjct: 392 EIINAS--RKKRIAKGSGTTVQEVNRLLKQF 420
>gi|331701481|ref|YP_004398440.1| signal recognition particle protein [Lactobacillus buchneri NRRL
B-30929]
gi|406027042|ref|YP_006725874.1| signal recognition particle protein [Lactobacillus buchneri CD034]
gi|329128824|gb|AEB73377.1| signal recognition particle protein [Lactobacillus buchneri NRRL
B-30929]
gi|405125531|gb|AFS00292.1| signal recognition particle protein [Lactobacillus buchneri CD034]
Length = 479
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/418 (48%), Positives = 293/418 (70%), Gaps = 12/418 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VVR FV+ V E+A G ++ G+ P QQ+VKIV +EL K MG E
Sbjct: 32 MREIRLALLEADVNFQVVRDFVKTVEERANGAKVLEGLNPSQQIVKIVDEELTKTMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L A+ PT+I+++GLQG GKTT + KLA LK +Q +L+A D+YRPAAIDQL
Sbjct: 92 VPLNKAEKIPTIIMMSGLQGAGKTTTAGKLALKLKNEQNARPLLIADDIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV++ GT+V P +IAK+G+E+AK+ + D VI+DTAGRLQID+ +MDEL +K
Sbjct: 152 VGQQIDVPVFSLGTDVDPVEIAKRGVEQAKQDHNDYVIIDTAGRLQIDEKLMDELSHIKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLV+DAMTGQ A A FN + +TG +LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 AVEPNEILLVIDAMTGQNAVATAEGFNKTLDVTGVVLTKLDGDTRGGAALSIRAVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+M DL+ FYPDRMA RILGMGD+LS +EK Q+ ++ A+E+ +KI FDF
Sbjct: 272 KFVGQGEKMSDLDVFYPDRMASRILGMGDMLSLIEKTQKEYDEKQAQELSEKIQENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMTPEERE 356
NDF+ Q + +MG + ++ MIPGM Q++ A K + ++A++ +MT +ER
Sbjct: 332 NDFVDQLNQIQKMGPLDEIMKMIPGMA--NNPQLKNANMDPKDMDHLKAIVYSMTDQERT 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P++L +P RR+R+A+ SG+ Q+V++++ Q Q MK +M + G++ + N+
Sbjct: 390 DPDVL--NPSRRRRIARGSGRPIQEVNRMIKQFGQ----MKTMMNKVSKGNMSGMENM 441
>gi|347549198|ref|YP_004855526.1| putative signal recognition particle protein Ffh [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346982269|emb|CBW86263.1| Putative signal recognition particle protein Ffh [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 450
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 296/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVGV +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIKTVSERAVGVDVMKSLTPGQQVIKIVQEELTNLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+ ++D VI+DTAGRL ID+ +MDELK VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEDHLDYVIIDTAGRLHIDETLMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IASPTEILLVVDSMTGQDAVNVAESFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ +
Sbjct: 272 KFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKDNSMTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I++MT E++ P
Sbjct: 332 DDFLEQLQQVKQMGPLDELLKMMPGAGKMKGLDNMQVDDKQLGHIEAIIKSMTKNEKDNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 392 DIINAS--RRKRIARGSGRPIQEINRLLKQFTEMKKMMKQM 430
>gi|387818670|ref|YP_005679017.1| signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Clostridium botulinum H04402 065]
gi|322806714|emb|CBZ04283.1| signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Clostridium botulinum H04402 065]
Length = 449
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/388 (49%), Positives = 287/388 (73%), Gaps = 2/388 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+++V+E+ +G +++ + P QQ++KIV +EL +LMG
Sbjct: 32 MREVKLALLEADVNYKVVKNFIKSVTEKCMGNEVLQSLTPGQQVIKIVNEELTELMGSTE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L + S TVI+L GLQG GKTT++ KLA +L+K+ K +LVA DVYRPAAI QL ++
Sbjct: 92 STLNSSTSGLTVIMLVGLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV+T G ++ P I+K +E AK +VVI+DTAGRL ID+ +MDEL ++K
Sbjct: 152 GKQIDIPVFTMGDKLNPVDISKAAIEHAKNNKNNVVIIDTAGRLHIDEELMDELHNIKEE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP+E+LLVVDAMTGQ+A + FN ++ I+G ILTKLDGD+RGGAALS+K ++GKPIK
Sbjct: 212 VNPSEILLVVDAMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAALSIKSMTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + +E A+E+ +++++ F+F
Sbjct: 272 FVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEEKAKEIGERMLNQEFNFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+ + + ++G +++++ MIPGM ++ + +EK +K EA+I +MT +ER P
Sbjct: 332 DFLESMQQMKKLGPINKLLEMIPGMNSKELKNIDLSSSEKEMKKTEAIISSMTIKERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLV 386
L++ SP R++R+A+ SG Q V++L+
Sbjct: 392 SLISSSPSRKRRIAKGSGTNVQHVNKLL 419
>gi|315607956|ref|ZP_07882949.1| signal recognition particle protein [Prevotella buccae ATCC 33574]
gi|315250425|gb|EFU30421.1| signal recognition particle protein [Prevotella buccae ATCC 33574]
Length = 447
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/402 (51%), Positives = 280/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M+D+RRALL+ADV+ V + F V E+A+G+ ++ V+P Q +VK+V DEL +LMGGE
Sbjct: 31 MKDVRRALLDADVNFKVAKNFTNTVKEKALGMNVLTAVKPGQLMVKLVHDELAELMGGED 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ LV K+RP +IL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAIDQL +
Sbjct: 91 APLVL-KNRPAIILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAIDQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGVPVY IA L+EAK KN DVVI+DTAGRL +D+ MM E+ ++K+
Sbjct: 150 VGEQVGVPVYAEPDNKDVIAIAANALKEAKAKNYDVVIIDTAGRLAVDEQMMTEISNLKQ 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A +QKKI FDF
Sbjct: 270 KFIGTGEKMEAIDVFHPARMADRILGMGDVVSLVERAQEQFDEEEARRLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK V + + K +E++I++MTP+ER PE
Sbjct: 330 NDFLNQIEQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIESIIKSMTPKERSNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S RR+R+A+ SG Q V++L+ Q Q R MK + G
Sbjct: 389 ILNSS--RRQRIAKGSGMNIQDVNRLIKQFDQTRKMMKMVTG 428
>gi|289435144|ref|YP_003465016.1| signal recognition particle protein [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289171388|emb|CBH27932.1| signal recognition particle protein [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 450
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 294/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIKTVSERAVGTDVMKSLTPGQQVIKIVQEELTNLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+ ++D VI+DTAGRL ID+ +MDELK VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEDHLDYVIIDTAGRLHIDETLMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NPTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IANPTEILLVVDSMTGQDAVNVAESFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K V GE+ME +E F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ +
Sbjct: 272 KFVATGEKMEAIETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKDNSMTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I++MT E++ P
Sbjct: 332 DDFLDQLQQVKQMGPLDELLKMMPGAGKMKGLDNMQVDDKQLGHIEAIIKSMTKNEKDNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 392 DIINAS--RRKRIARGSGRPIQEINRLLKQFNEMKKMMKQM 430
>gi|194466489|ref|ZP_03072476.1| signal recognition particle protein [Lactobacillus reuteri 100-23]
gi|194453525|gb|EDX42422.1| signal recognition particle protein [Lactobacillus reuteri 100-23]
Length = 481
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/419 (49%), Positives = 287/419 (68%), Gaps = 13/419 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A G +++G+ P QQ+VKIV DEL KLMG E
Sbjct: 32 MREIRLALLEADVNFKVVKDFVKTVREKAAGAEVLKGLNPAQQIVKIVNDELTKLMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++ GLQG GKTT + KLA LK + + M +A DVYRPAAI QL
Sbjct: 92 VPLNKAPHIPTVIMMVGLQGAGKTTTAGKLALRLKNENHARPMFIAADVYRPAAITQLQQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ +Q+ VPV+ GT+V P +I ++G+E AKK + D VI+DTAGRLQID+ +MDEL ++K
Sbjct: 152 VADQIDVPVFEKGTDVDPVEIVREGMEVAKKNHNDYVIIDTAGRLQIDEQLMDELANIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++NP E+LLV+D+MTGQ A F+ ++ ITG ILTKLDGD+RGGAA+S++ V+GKPI
Sbjct: 212 LVNPNEILLVIDSMTGQNAVNTAQGFDDKLNITGVILTKLDGDTRGGAAMSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E K+ FD+
Sbjct: 272 KFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETMDKMRENTFDY 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q V +MG + +I M+PGM PA + K + A++ +MTPEERE
Sbjct: 332 NDFLAQMDQVTKMGPLENIIKMMPGMAN-NPALKNLNLDPKQFAHIRAIVLSMTPEERES 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-------NLMGVMEGGSLP 409
P+++ +P RR+R+A +G+ +V++++ Q QMR MK N M M GG +P
Sbjct: 391 PDIM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQVTNGNFNGMQNMFGGQMP 447
>gi|227544363|ref|ZP_03974412.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
CF48-3A]
gi|338202518|ref|YP_004648663.1| signal recognition particle protein [Lactobacillus reuteri SD2112]
gi|227185626|gb|EEI65697.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
CF48-3A]
gi|336447758|gb|AEI56373.1| signal recognition particle protein [Lactobacillus reuteri SD2112]
Length = 481
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/419 (49%), Positives = 287/419 (68%), Gaps = 13/419 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A G +++G+ P QQ+VKIV DEL KLMG E
Sbjct: 32 MREIRLALLEADVNFKVVKDFVKTVREKAAGAEVLKGLNPAQQIVKIVNDELTKLMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++ GLQG GKTT + KLA LK + + M +A DVYRPAAI QL
Sbjct: 92 VPLNKAPHIPTVIMMVGLQGAGKTTTAGKLALRLKNENHARPMFIAADVYRPAAITQLQQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ +Q+ VPV+ GT+V P +I ++G+E AKK + D VI+DTAGRLQID+ +MDEL ++K
Sbjct: 152 VADQIDVPVFEKGTDVDPVEIVREGMEVAKKNHNDYVIIDTAGRLQIDEQLMDELANIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++NP E+LLV+D+MTGQ A F+ ++ ITG +LTKLDGD+RGGAA+S++ V+GKPI
Sbjct: 212 LVNPNEILLVIDSMTGQNAVNTAQGFDDKLDITGVVLTKLDGDTRGGAAMSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E K+ FD+
Sbjct: 272 KFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETMDKMRENTFDY 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q V +MG + +I M+PGM PA + K + A++ +MTPEERE
Sbjct: 332 NDFLAQMDQVTKMGPLENIIKMMPGMAN-NPALKNLNLDPKQFAHIRAIVLSMTPEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-------NLMGVMEGGSLP 409
P+L+ +P RR+R+A +G+ +V++++ Q QMR MK N M M GG +P
Sbjct: 391 PDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQVTNGNFNGMQNMFGGQMP 447
>gi|377556838|ref|ZP_09786517.1| Signal recognition particle protein [Lactobacillus gastricus PS3]
gi|376167268|gb|EHS86121.1| Signal recognition particle protein [Lactobacillus gastricus PS3]
Length = 483
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/430 (48%), Positives = 295/430 (68%), Gaps = 10/430 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V EQAVG +++G+ P QQ+VKIV +EL K+MG
Sbjct: 32 MREIRLALLEADVNFTVVKNFVKTVQEQAVGTEVLKGLNPAQQIVKIVNEELTKMMGETA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PTVI++ GLQG GKTT + KLA LK + K+ M +A D+YRPAAI QL
Sbjct: 92 VPLNKSDHIPTVIMMVGLQGAGKTTTAGKLALRLKNEEKARPMFIAADIYRPAAITQLKQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ + + VPV+ GT+V P +I +QG+E AK+ + D VI+DTAGRLQID+A+MDEL ++K
Sbjct: 152 VADSIDVPVFDLGTDVDPVEIVRQGMEVAKEHHNDYVIIDTAGRLQIDEALMDELANIKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LLVVDAMTGQ A F+ ++ ITG +LTKLDGD+RGGAA+S++ V+GKPI
Sbjct: 212 LAHPDEILLVVDAMTGQNAVNTAEGFDEKLDITGVVLTKLDGDTRGGAAMSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME+L+ FYPDRM+ RILGMGD+L+ +EKAQ+ +E A E +K+ NFD+
Sbjct: 272 KFVGEGEKMENLDVFYPDRMSSRILGMGDMLTLIEKAQKNFDEEQAAETMRKMQENNFDY 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q V++MG + +I M+PGM PA + K ++A+I++MTPEERE
Sbjct: 332 NDFLDQMDQVSKMGPLEDLIKMMPGMAN-NPALKNINIDPKQFLHIKAIIQSMTPEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDA 417
P+L+ +P RR+R+A SG+ +V++++ Q QMR MK + G+L + N+
Sbjct: 391 PDLM--NPSRRRRLAAGSGRPIVEVNRMIKQFDQMRKMMKQV----TNGNLNGMENMMGG 444
Query: 418 LKSEQKAPPG 427
L + P G
Sbjct: 445 LGNMPGMPGG 454
>gi|410584603|ref|ZP_11321705.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter subterraneus DSM 13965]
gi|410504189|gb|EKP93701.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter subterraneus DSM 13965]
Length = 445
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/400 (51%), Positives = 289/400 (72%), Gaps = 5/400 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VV+ F+ V E+AVG ++ + P QQ++KIV DEL +LMGG+
Sbjct: 32 LREVRLALLEADVNFKVVKDFIARVRERAVGQEVLESLTPAQQVIKIVHDELTQLMGGQH 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L P V++L GLQG GKTT +AKLA L +QG+ +LVA DVYRPAA++QLV L
Sbjct: 92 ARLDLGGELPAVVMLVGLQGSGKTTTAAKLARLLTRQGRQPLLVAADVYRPAAVEQLVTL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QV VPVY GT+ P IA++G+ EA+++ DVV++DTAGRL ID A+M+EL+ +++
Sbjct: 152 GQQVQVPVYAPGTDRDPVDIAREGVAEARRRGRDVVLIDTAGRLHIDDALMEELERIRQA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + TF+ +GI G ILTKLDGD+RGGAALSV+ V+G+PIK
Sbjct: 212 VAPREILLVVDAMTGQDAVNVAETFHRRLGIDGVILTKLDGDARGGAALSVRAVTGRPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GER++ LEPF+P+RMA RILGMGDVLS +EKAQ V + A+ +++K+ FD
Sbjct: 272 FAGLGERVDQLEPFHPERMASRILGMGDVLSLIEKAQAVFDAQQAQRLERKLREQAFDLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q R V +MG + +++ MIPG+ G++ V E E L+ +EA+I++MTPEER +PE
Sbjct: 332 DFLEQLRQVRKMGPLDQLLAMIPGLGGRLKDVTVDERE--LRRIEAIIQSMTPEERRRPE 389
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ S RR+R+A SG Q V++L+ Q + + MK +
Sbjct: 390 IINAS--RRRRIAMGSGTRVQDVNRLLKQFAETQRLMKQV 427
>gi|404370917|ref|ZP_10976232.1| signal recognition particle protein [Clostridium sp. 7_2_43FAA]
gi|226912962|gb|EEH98163.1| signal recognition particle protein [Clostridium sp. 7_2_43FAA]
Length = 450
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/404 (48%), Positives = 289/404 (71%), Gaps = 9/404 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV++F+ +VSE+ VG ++ + P QQ++KIV +EL LMGG
Sbjct: 32 MREVKLALLEADVNFKVVKKFISSVSEKCVGNEVLESLTPAQQVIKIVNEELTNLMGGSE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L F PTVI++ GLQG GKTT+S KLA L+KQ K +LVA D+YRPAAI QL ++
Sbjct: 92 SKLNFNSVGPTVIMMVGLQGAGKTTMSGKLALQLRKQNKKPLLVACDIYRPAAIKQLEVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV+ G +V P IAK G+ A++ +V+I+DTAGRL ID+ +M+ELK +K
Sbjct: 152 GKQIDIPVFQMGDKVNPVDIAKAGIAHARENGNNVIIIDTAGRLHIDENLMEELKSIKEE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+LLVVD+MTGQ+A + +FN + ++G ILTKLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VNPQEILLVVDSMTGQDAVNVAESFNNSLDVSGVILTKLDGDTRGGAALSIRSVTEKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+M D E FYPDRM+ RILGMGDVLS +EKAQ+ ++A+E+ K++ +F +
Sbjct: 272 FIGVGEKMSDFEVFYPDRMSSRILGMGDVLSLIEKAQQAFDDKEAQELSSKMLENDFTYE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-----AEKSLKIMEAMIEAMTPEER 355
D+L + ++GS+S+++ M+PG+ P +V++ EK L ++A+I +MTP+ER
Sbjct: 332 DYLTAMEQMKKLGSLSKIMEMVPGI----PKEVKDIDFDAGEKQLGRVKAIIHSMTPKER 387
Query: 356 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
P+L+A S R+KR+A+ SG + Q+V++L+ MR +MK +
Sbjct: 388 RNPKLIAGSSSRKKRIAKGSGTSLQEVNKLIKGFDMMRKQMKQM 431
>gi|148380407|ref|YP_001254948.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 3502]
gi|153933476|ref|YP_001384624.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 19397]
gi|153935337|ref|YP_001388141.1| signal recognition particle protein [Clostridium botulinum A str.
Hall]
gi|168180670|ref|ZP_02615334.1| signal recognition particle protein [Clostridium botulinum NCTC
2916]
gi|168184655|ref|ZP_02619319.1| signal recognition particle protein [Clostridium botulinum Bf]
gi|226949802|ref|YP_002804893.1| signal recognition particle protein [Clostridium botulinum A2 str.
Kyoto]
gi|237795885|ref|YP_002863437.1| signal recognition particle protein [Clostridium botulinum Ba4 str.
657]
gi|421837788|ref|ZP_16271860.1| signal recognition particle protein [Clostridium botulinum
CFSAN001627]
gi|148289891|emb|CAL83999.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 3502]
gi|152929520|gb|ABS35020.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 19397]
gi|152931251|gb|ABS36750.1| signal recognition particle protein [Clostridium botulinum A str.
Hall]
gi|182668381|gb|EDT80360.1| signal recognition particle protein [Clostridium botulinum NCTC
2916]
gi|182672287|gb|EDT84248.1| signal recognition particle protein [Clostridium botulinum Bf]
gi|226841461|gb|ACO84127.1| signal recognition particle protein [Clostridium botulinum A2 str.
Kyoto]
gi|229263878|gb|ACQ54911.1| signal recognition particle protein [Clostridium botulinum Ba4 str.
657]
gi|409739977|gb|EKN40451.1| signal recognition particle protein [Clostridium botulinum
CFSAN001627]
Length = 449
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/393 (49%), Positives = 288/393 (73%), Gaps = 3/393 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+++V+E+ +G ++ + P QQ++KIV +EL +LMG
Sbjct: 32 MREVKLALLEADVNYKVVKNFIKSVTEKCMGNEVLESLTPGQQVIKIVNEELTELMGSTE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L + S TVI+L GLQG GKTT++ KLA +L+K+ K +LVA DVYRPAAI QL ++
Sbjct: 92 STLNSSTSGLTVIMLVGLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV+T G ++ P I+K +E AK +VVI+DTAGRL ID+ +MDEL ++K
Sbjct: 152 GKQIDIPVFTMGDKLNPVDISKAAIEHAKNNKNNVVIIDTAGRLHIDEELMDELHNIKEE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP+E+LLVVDAMTGQ+A + FN ++ I+G ILTKLDGD+RGGAALS+K ++GKPIK
Sbjct: 212 VNPSEILLVVDAMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAALSIKSMTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + +E A+E+ +++++ F+F
Sbjct: 272 FVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEEKAKEIGERMLNQEFNFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+ + + ++G +++++ MIPGM ++ + +EK +K EA+I +MT +ER P
Sbjct: 332 DFLESMQQMKKLGPINKLLEMIPGMNSKELKNIDLSSSEKEMKKTEAIISSMTIKERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 391
L++ SP R++R+A+ SG Q V++L+ FQ
Sbjct: 392 SLISSSPSRKRRIAKGSGTNVQHVNKLLKD-FQ 423
>gi|408356888|ref|YP_006845419.1| signal recognition particle protein [Amphibacillus xylanus NBRC
15112]
gi|407727659|dbj|BAM47657.1| signal recognition particle protein [Amphibacillus xylanus NBRC
15112]
Length = 450
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/403 (49%), Positives = 291/403 (72%), Gaps = 4/403 (0%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
R++R ALLEADV+ VV+ FV + +AVG ++ + P QQ++KIV++EL LMGGE S
Sbjct: 33 REVRLALLEADVNFKVVKEFVNNIRTRAVGAEVMESLTPGQQVIKIVKEELTALMGGEQS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
++ A PTVI++ GLQG GKTT + KLAN L KK + +LVA DVYRPAA+DQL +
Sbjct: 93 KIAVADRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADVYRPAAVDQLKTV 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV+ GT+ P +IA + ++ AK++++D VI+DTAGRL ID +MDEL +K+
Sbjct: 153 GKQLNIPVFEKGTDANPVEIANEAIQYAKEEHLDYVIIDTAGRLHIDTDLMDELYQIKQN 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
L+P E+ LVVD+MTGQ+A + FN ++ ITG ILTKLDGD+RGGAALS+K V+ KPIK
Sbjct: 213 LSPDEIFLVVDSMTGQDAVNVAENFNEQLDITGVILTKLDGDTRGGAALSIKSVTNKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+++ LE F+PDRMA RILGMGDVLS +EKA+ + ++ A+E++ K+ SA+FDF+
Sbjct: 273 FIGMGEKLDQLEDFHPDRMASRILGMGDVLSLIEKAEATIDEKKAKELEDKMRSASFDFD 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V MG + ++ ++PG K+ + V+ +K L +EA+I++MT +ER+ P
Sbjct: 333 DFLEQMEQVRSMGPLDELLSLLPGANKMKGLKNVQLDDKQLVHVEAIIKSMTKQERKDPS 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
L+ +P R+KR+AQ SG+ +V++L+ Q +MR MK + G+
Sbjct: 393 LM--NPSRKKRIAQGSGRPIAEVNRLIKQFNEMRKMMKQMSGM 433
>gi|299536774|ref|ZP_07050082.1| signal recognition particle-like (SRP) component [Lysinibacillus
fusiformis ZC1]
gi|424737018|ref|ZP_18165474.1| signal recognition particle-like (SRP) component [Lysinibacillus
fusiformis ZB2]
gi|298727786|gb|EFI68353.1| signal recognition particle-like (SRP) component [Lysinibacillus
fusiformis ZC1]
gi|422948850|gb|EKU43226.1| signal recognition particle-like (SRP) component [Lysinibacillus
fusiformis ZB2]
Length = 452
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/421 (50%), Positives = 302/421 (71%), Gaps = 9/421 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R AL+EADV+L VV+ FV+ VSE+AVGV +++ + P QQ++KIV+DEL +LMGGE
Sbjct: 32 MREVRFALIEADVNLKVVKEFVKKVSERAVGVDVMQSLTPGQQVIKIVQDELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S + F PTVI++ GLQG GKTT + KLAN L KK + +LVA DVYRPAA+ QL
Sbjct: 92 SPIKFNTKPPTVIMMVGLQGAGKTTTTGKLANVLRKKYNRKPLLVAADVYRPAAVQQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV+ GTEV P +IA+Q +E AK+++ DVVI+DTAGRL ID+ +M ELKD++
Sbjct: 152 LGKQLSLPVFALGTEVSPVEIARQAIELAKEEHHDVVIIDTAGRLHIDEDLMQELKDIRS 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P EV LVVDAMTGQ+A + +FN IGITG +LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 LKEPDEVFLVVDAMTGQDAVNVAESFNEAIGITGVVLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ LEPF+P+RMA RILGMGDVLS +EKAQ + + A+E+++K S F F
Sbjct: 272 KFVGMGEKMDALEPFHPERMASRILGMGDVLSLIEKAQANVDEAKAKELEEKFKSQTFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DF++Q + V +MG + ++ M+PG KI V+ +K + +EA+I +MTP E+ P
Sbjct: 332 DDFVEQLQQVKKMGPLDEILKMLPGANKIKGLDNVKVDDKQMGRVEAIIYSMTPAEKTNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-----SLPALSN 413
E++ S R+KR+A+ SG + Q+V++L+ Q +M+ MK + G+ G LP +
Sbjct: 392 EIINGS--RKKRIAKGSGTSIQEVNRLIKQFDEMKKMMKQMTGMASGKGKKKMKLPGFDS 449
Query: 414 L 414
L
Sbjct: 450 L 450
>gi|352516955|ref|YP_004886272.1| signal recognition particle protein [Tetragenococcus halophilus
NBRC 12172]
gi|348601062|dbj|BAK94108.1| signal recognition particle protein [Tetragenococcus halophilus
NBRC 12172]
Length = 475
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/421 (48%), Positives = 298/421 (70%), Gaps = 10/421 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+AVG ++ + P QQ+VKIV +EL K +G E
Sbjct: 32 MREIRLALLEADVNLQVVKDFTKNVRERAVGAEVLESLSPAQQIVKIVDEELTKTLGSEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
L A PTVI++AGLQG GKTT + KLAN+L K + M++AGDVYRPAA+DQL +
Sbjct: 92 VGLNKAPKIPTVIMMAGLQGAGKTTFAGKLANHLIKNENARPMMIAGDVYRPAAVDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GTE P +I +QG+E A +K D V++DTAGRL +D+A+M+EL+D+K
Sbjct: 152 LGQQLDVPVFEMGTEESPVEIVRQGMELAHEKKNDYVLIDTAGRLHVDEALMEELQDIKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ+A + +FN ++GI+G ++TKLDGD+RGGAALS++ V+G PI
Sbjct: 212 IAQPNEILLVVDAMTGQDAVNVAESFNEQLGISGVVITKLDGDTRGGAALSIRSVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE++ D+E F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEEM +K+ FDF
Sbjct: 272 KFTGIGEKLTDMEVFHPDRMSSRILGMGDMLTLIEKAQQDYDEQRAEEMAEKMRENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDF++Q ++ MGSM ++ MIPGM ++ P V+ K ++ +AM+ +MTP ERE
Sbjct: 332 NDFIEQMDQLSNMGSMEDIMKMIPGMNQM-PGIDNVQFDPKDMERKKAMVYSMTPAERED 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDA 417
P+LL +P RR+R+A SG + +V++++ Q + R +M M G++ ++ ++
Sbjct: 391 PDLL--NPSRRRRIAAGSGNSVIEVNRMIKQFKESR----KMMQQMSKGNMDSIPGMDQM 444
Query: 418 L 418
L
Sbjct: 445 L 445
>gi|431794557|ref|YP_007221462.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784783|gb|AGA70066.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 453
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/402 (51%), Positives = 287/402 (71%), Gaps = 6/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+++G ++ + P QQ++KIV +E+V LMGG
Sbjct: 31 MREVRMALLEADVNFKVVKDFVAKVKERSIGQEVLESLSPGQQVIKIVNEEMVALMGGVS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ + PTVI+L GLQG GKTT AKLAN LKKQGK +LVA D+YRPAAI QL +L
Sbjct: 91 SKINISSKPPTVIMLVGLQGAGKTTHGAKLANMLKKQGKHPLLVACDIYRPAAIKQLEVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ G E P +IA LE A + +DVVI+DTAGRL I++ +M ELKD+K
Sbjct: 151 GDQIKVPVFSLGQE-NPVKIALASLEHALSQGLDVVIIDTAGRLHINEELMGELKDIKAA 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +F+ ++GI G I+TKLDGD+RGGAALSVK V+G PIK
Sbjct: 210 VKPHEILLVVDAMTGQDAVNVAESFHGDLGIDGIIMTKLDGDTRGGAALSVKAVTGCPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++ +EPF+PDRMA RILGMGDVL+ +EKAQE ++ A EM++K+ F +
Sbjct: 270 FAGIGEKLDAIEPFFPDRMASRILGMGDVLTLIEKAQEAFDEKQAREMEQKLRKQEFTLD 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL Q + + +MG + ++ MIPG GK + AQ+ EK + +EA+I +MT EER KP
Sbjct: 330 DFLDQMQQIKKMGPLGSLLEMIPGAGKQLKDAQID--EKDMSHVEAIIHSMTQEERRKPA 387
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
L+ +S R++R+A+ SG + Q+V +L+ Q QM+ MK G
Sbjct: 388 LIKDS--RKRRIAKGSGTSVQEVGRLLKQFEQMQKMMKQFAG 427
>gi|372324774|ref|ZP_09519363.1| Ffh-like signal recognition particle subunit [Oenococcus kitaharae
DSM 17330]
gi|366983582|gb|EHN58981.1| Ffh-like signal recognition particle subunit [Oenococcus kitaharae
DSM 17330]
Length = 501
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/464 (47%), Positives = 294/464 (63%), Gaps = 28/464 (6%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+IR ALLEADV+L + R F+ V E+A+G ++ G+ P +Q++KIV D+L +MG +
Sbjct: 32 LREIRLALLEADVNLKIARSFIAQVREKALGAKVLEGLNPSEQIIKIVNDQLTDMMGAQA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PTVI++AGLQG GKTT AKLAN LK + +L+A DVYRPAAI+QL
Sbjct: 92 VPLNKSPKIPTVIMMAGLQGAGKTTTVAKLANKLKNDNHARPLLIAADVYRPAAIEQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG Q+ +PV+ GT+V P QI K GL++A ++ D V +DTAGRLQID+ +M ELKD+++
Sbjct: 152 LGRQLSIPVFDQGTDVDPRQIVKDGLKQADQEKNDYVFIDTAGRLQIDELLMQELKDIEK 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ A FN +GITG +LTKLDGD+RGGAALS++EV+GKPI
Sbjct: 212 IAKPDEILLTVDAMTGQNATETAQGFNDALGITGVVLTKLDGDTRGGAALSIREVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++ DL+ FYPDRMA RILGMGD+LS +EK Q+ + + A +K+ +FDF
Sbjct: 272 KFVGEGEKVTDLDVFYPDRMASRILGMGDILSLIEKTQKDVDAKQAAAQLQKLQENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
NDFL Q + V MG M ++ MIPGM AQV+ K MEA++ +MTP ER P
Sbjct: 332 NDFLDQLKQVQNMGPMEDMLKMIPGMANNAALAQVQVGPKDFAHMEAIVYSMTPAERLDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDAL 418
ELL SP RR+R+A SG+ V++++ Q QMR M G LPA +ED L
Sbjct: 392 ELL--SPARRRRIAAGSGRPVIDVNKMIKQFKQMRQMMYKFTN--GKGGLPA--GMEDML 445
Query: 419 KSEQKAPPGTARRKRRSESRRQFVDPAS------TRPSPRGFGG 456
+ G DPA + P+ GFGG
Sbjct: 446 SGVDPSALGA--------------DPAQMGGMMPSFPNQGGFGG 475
>gi|169827098|ref|YP_001697256.1| signal recognition particle-like (SRP) component [Lysinibacillus
sphaericus C3-41]
gi|168991586|gb|ACA39126.1| signal recognition particle-like (SRP) component [Lysinibacillus
sphaericus C3-41]
Length = 452
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/421 (50%), Positives = 304/421 (72%), Gaps = 9/421 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R AL+EADV+L VV+ FV+ VSE+AVGV +++ + P QQ++KIV+DEL +LMGGE
Sbjct: 32 MREVRFALIEADVNLKVVKEFVKKVSERAVGVDVMQSLTPGQQVIKIVQDELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S + F PTVI++ GLQG GKTT + KLAN L KK + +LVA DVYRPAA+ QL
Sbjct: 92 SPIKFNTKPPTVIMMVGLQGAGKTTTTGKLANVLRKKYNRKPLLVAADVYRPAAVQQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ GT++ P +IA+Q +E+AK+ + DVVI+DTAGRL ID+ +M ELKD++
Sbjct: 152 LGKQLSLPVFSLGTDISPVKIARQAIEKAKEDHHDVVIIDTAGRLHIDEDLMQELKDIRA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P EV LVVDAMTGQ+A + +FN IGITG +LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 LKEPDEVFLVVDAMTGQDAVNVAESFNEAIGITGVVLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ LEPF+P+RMA RILGMGDVLS +EKAQ + + A+E+++K + +F F
Sbjct: 272 KFVGMGEKMDALEPFHPERMASRILGMGDVLSLIEKAQANVDEAKAKELEEKFKTQSFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DF++Q + V +MG + ++ M+PG KI V+ +K + +EA+I +MTP E+ P
Sbjct: 332 DDFVEQLQQVKKMGPLDEILKMLPGANKIKGLDNVKVDDKQMGRVEAIIYSMTPAEKTNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG-----SLPALSN 413
EL+ S R+KR+A+ SG + Q+V++L+ Q +M+ MK + G+ G LP +
Sbjct: 392 ELINGS--RKKRIAKGSGTSIQEVNRLIKQFDEMKKMMKQMTGMASGKGKKKMKLPGFDS 449
Query: 414 L 414
L
Sbjct: 450 L 450
>gi|452991209|emb|CCQ97464.1| signal recognition particle-like (SRP) GTPase [Clostridium
ultunense Esp]
Length = 446
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/397 (51%), Positives = 278/397 (70%), Gaps = 2/397 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ V E+A+G ++ + P QQ+VKIV +EL KLMG +
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVKERAIGSEVMESLTPGQQVVKIVNEELTKLMGEKE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L FA + PTVIL+ GLQG GKTT + KLAN LK Q K +LV DVYRPAAI QL ++
Sbjct: 92 SKLNFASTPPTVILMCGLQGAGKTTTAGKLANNLKIQSKRPLLVVCDVYRPAAIKQLEVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE+VGVPV+T G + P IAK +E K+ N D +I+DTAGRL ID +MDEL+ +
Sbjct: 152 GERVGVPVFTMGDKNNPVDIAKAAVEHGKRNNNDCIIIDTAGRLHIDDDLMDELEGIYNG 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+LLVVDAMTGQ+A + TFN + ITG +LTKLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VNPQEILLVVDAMTGQDAVNVAETFNERLEITGVVLTKLDGDARGGAALSIRAVTEKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++ LEPF+PDRMA RILGMGDVLS +E+AQ + ++ A E++KKI S F +
Sbjct: 272 FVGMGEKLDQLEPFHPDRMASRILGMGDVLSLIERAQSSIDEKKALELEKKIKSQQFTLD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q + +G + ++GMIPG+ + EK + ++A+I++MTP+ER P +
Sbjct: 332 DFLEQIDQMKNLGPLDELLGMIPGVNSKALKNLDVNEKDIIKIQAIIQSMTPQERNDPSI 391
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
+ RRKR+A SG T Q V++L+ Q + MK
Sbjct: 392 IDSK--RRKRIANGSGTTVQDVNKLLKQFRDTKKMMK 426
>gi|121533796|ref|ZP_01665623.1| signal recognition particle protein [Thermosinus carboxydivorans
Nor1]
gi|121307787|gb|EAX48702.1| signal recognition particle protein [Thermosinus carboxydivorans
Nor1]
Length = 444
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/407 (50%), Positives = 285/407 (70%), Gaps = 3/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ V + F+ V E+AVG ++ + P Q ++KIV +EL +LMGG
Sbjct: 30 LREVRMALLEADVNFKVAKDFIARVKERAVGQEVMASLTPAQHVIKIVYEELTQLMGGTQ 89
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S + + PTV++L GLQG GKTT + KLA+ LKKQ K +LVA DVYRPAAI QL +L
Sbjct: 90 SRITISSRPPTVVMLVGLQGAGKTTTAGKLAHLLKKQNKRPLLVAADVYRPAAIKQLQVL 149
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE++G+PV+T G + P +IA++ +E A D+VI+DTAGRL I++ +MDELK +K
Sbjct: 150 GEKLGLPVFTLGDKESPVRIAQKAIEHALSHARDIVIIDTAGRLHINEQLMDELKAIKNT 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + FN ++GI G ILTKLDGD+RGGAALSV+ V+G+PIK
Sbjct: 210 VKPHEILLVVDAMTGQDAVTVAEAFNEQLGIDGVILTKLDGDARGGAALSVRAVTGRPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++ LEPFYPDRMA RILGMGDVLS +EKA+E + E A EM+KKI F +
Sbjct: 270 YVGMGEKLDALEPFYPDRMASRILGMGDVLSLIEKAEEAINLEQAREMEKKIRKEEFTLD 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL Q + + ++G + +++ M+PGMG + Q ++ EK LK +EA+I +MT +ER P
Sbjct: 330 DFLDQLQQLKKLGPLDQLLSMLPGMGNLKKLQGLKFDEKELKHVEAIIRSMTKKERRDPS 389
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
++ S RRKR+A SG Q V++L+ Q + + MK L + + G
Sbjct: 390 IINGS--RRKRIAMGSGTKVQDVNRLLKQFAEAKKMMKRLQEMQKTG 434
>gi|422422505|ref|ZP_16499458.1| signal recognition particle protein [Listeria seeligeri FSL S4-171]
gi|313637361|gb|EFS02841.1| signal recognition particle protein [Listeria seeligeri FSL S4-171]
Length = 450
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 294/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIKTVSERAVGADVMKSLTPGQQVIKIVQEELTNLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+ ++D VI+DTAGRL ID+ +MDELK VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEDHLDYVIIDTAGRLHIDETLMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NPTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IANPTEILLVVDSMTGQDAVNVAESFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K V GE+ME +E F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ +
Sbjct: 272 KFVATGEKMEAIETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKDNSMTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I++MT E++ P
Sbjct: 332 DDFLDQLQQVKQMGPLDELLKMMPGAGKMKGLDNMQVDDKQLGHIEAIIKSMTKNEKDYP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 392 DIINAS--RRKRIARGSGRPIQEINRLLKQFTEMKKMMKQM 430
>gi|374708674|ref|ZP_09713108.1| signal recognition particle protein [Sporolactobacillus inulinus
CASD]
Length = 447
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 290/407 (71%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ F++ V E+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREIRLALLEADVNFKVVKTFIKKVQERAVGQEIMKSLTPGQQIIKVVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQG-KSCMLVAGDVYRPAAIDQLVI 119
++L F+ PTV+L GLQG GKTT +AKLAN+++K K +++A D+YRPAAI QL
Sbjct: 92 TKLNFSLKPPTVLLFVGLQGAGKTTSAAKLANHIRKNNNKKPLMIAADIYRPAAIKQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG Q+ +PV++ G +V P I +QG+++A+ + D+VI+DTAGRL ID+ +M+EL+ +K
Sbjct: 152 LGSQLNIPVFSLGDQVNPVDIVRQGMDQARADHNDLVIIDTAGRLHIDEGLMNELEQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V +P EV LVVDAMTGQ+A + FN + ITG I+TKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 VSHPDEVFLVVDAMTGQDAVNVARAFNDRLDITGVIMTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ LEPF+PDRMA RILGMGDVLS +EKAQ + +E A +MQ+K++S +F
Sbjct: 272 KFVGMGEKMDALEPFHPDRMASRILGMGDVLSLIEKAQATIDEEKARDMQQKLLSVSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + ++ M+PG K + ++ EK + EA+I +MT E+ +P
Sbjct: 332 DDFLEQIGQVRTMGPLEDLLAMMPGANKFKGMKNMQIDEKKIDQTEAIIRSMTSHEKTEP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
E++ S R+KR+A SG + V++L+ Q M+ MK MG +G
Sbjct: 392 EIINAS--RKKRIALGSGTSVADVNRLLKQFKDMKKMMKQFMGKAKG 436
>gi|312793157|ref|YP_004026080.1| signal recognition particle protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|344996632|ref|YP_004798975.1| signal recognition particle protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|312180297|gb|ADQ40467.1| signal recognition particle protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|343964851|gb|AEM73998.1| signal recognition particle protein [Caldicellulosiruptor
lactoaceticus 6A]
Length = 443
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/399 (49%), Positives = 280/399 (70%), Gaps = 2/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++++ ALLEADV+ VV+ F+ V+++AVG ++ + P QQ++KIV DE+V L+GG
Sbjct: 31 MKEVKLALLEADVNYKVVKDFINTVTQKAVGEEVLESLTPAQQVIKIVYDEMVNLLGGSD 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L F+ S ++ ++ GLQG GKTT + KLA LKKQGK+ +LVA D+YRPAAI QL ++
Sbjct: 91 TKLTFSPSGFSIYMMVGLQGSGKTTTAGKLAGLLKKQGKNPLLVACDIYRPAAIKQLEVV 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
++VGV + +IAK+G+E AK DV IVDTAGRL I++ +MDEL +K
Sbjct: 151 AQKVGVKCFADYNSKDAVKIAKEGIEFAKANRCDVAIVDTAGRLHINQELMDELVSIKNA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ PTE+LLV+DAMTGQ+A + T FN ++GI G I+TKLDGD+RGGAALSVK ++GKPIK
Sbjct: 211 IKPTEILLVLDAMTGQDAVNVATAFNEQLGIDGIIMTKLDGDTRGGAALSVKAITGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+MEDLE F+PDRMA RILGMGD+L+ +EKAQE + Q+ AEE++KK+ S F
Sbjct: 271 FAGVGEKMEDLEAFHPDRMASRILGMGDILTLIEKAQEAIDQKKAEELEKKLRSMQFTLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +MT EER+ P +
Sbjct: 331 DFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKELKKIEAIINSMTKEERQDPSI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 391 INSS--RKRRIAMGSGTTVQDVNRLLKQFEDMKKMMKQF 427
>gi|312127973|ref|YP_003992847.1| signal recognition particle protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777992|gb|ADQ07478.1| signal recognition particle protein [Caldicellulosiruptor
hydrothermalis 108]
Length = 443
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/399 (49%), Positives = 281/399 (70%), Gaps = 2/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++++ ALLEADV+ VV+ F+ V+++AVG ++ + P QQ++KIV DE+V+L+GG
Sbjct: 31 MKEVKLALLEADVNYKVVKDFINTVTQKAVGEEVLESLTPAQQVIKIVYDEMVRLLGGSD 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L F+ S ++ ++ GLQG GKTT + KLA LKKQGK+ +LVA D+YRPAAI QL ++
Sbjct: 91 TKLTFSPSGFSIYMMVGLQGSGKTTTAGKLAGLLKKQGKNPLLVACDIYRPAAIKQLEVV 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
++VGV + +IAK+G+E AK DV IVDTAGRL I++ +MDEL +K
Sbjct: 151 AQKVGVKCFADYNSKDAVKIAKEGIEFAKASRCDVAIVDTAGRLHINQELMDELVSIKNA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ PTE+LLV+DAMTGQ+A + T FN ++GI G I+TKLDGD+RGGAALSVK ++GKPIK
Sbjct: 211 IKPTEILLVLDAMTGQDAVNVATAFNEQLGIDGIIMTKLDGDTRGGAALSVKAITGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+MEDLE F+PDRMA RILGMGD+L+ +EKAQE + Q+ AEE++KK+ S F
Sbjct: 271 FAGVGEKMEDLEAFHPDRMASRILGMGDILTLIEKAQEAIDQKKAEELEKKLRSMQFTLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +MT EER+ P +
Sbjct: 331 DFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKELKKIEAIINSMTKEERQDPSI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 391 INSS--RKRRIAMGSGTTVQDVNRLLKQFEDMKRMMKQF 427
>gi|326204801|ref|ZP_08194655.1| signal recognition particle protein [Clostridium papyrosolvens DSM
2782]
gi|325985013|gb|EGD45855.1| signal recognition particle protein [Clostridium papyrosolvens DSM
2782]
Length = 436
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/391 (51%), Positives = 279/391 (71%), Gaps = 2/391 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+I+ ALLEADV+ VV+ F+ VSE+AVG ++ + P QQ+VKIV +EL++L+G E
Sbjct: 33 MREIKLALLEADVNFKVVKEFISKVSERAVGSDVLESLTPGQQVVKIVHEELIELLGREQ 92
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ FA PT+ ++AGLQG GKTT + KLAN L+KQGK+ +LVA DVYRPAAI QL +L
Sbjct: 93 SKVTFASKPPTIFMMAGLQGAGKTTTAGKLANLLRKQGKNPLLVACDVYRPAAIKQLQVL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ +PV+T P QIAK+ + A+KK D+VI+DTAGRL ID+ +MDEL ++K
Sbjct: 153 GNQLNIPVFTLEDNQNPVQIAKEAVSFAEKKQHDLVIIDTAGRLHIDEKLMDELLNIKNS 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + TFN ++GI G +LTKLDGD+RGGAALSVK V+GKPIK
Sbjct: 213 VKPHEILLVVDSMTGQDAVNVSETFNKKLGIDGVVLTKLDGDTRGGAALSVKSVTGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE++ D+EPF+PDRMA RILGMGDVLS +EKAQE ++ A E++KK+ + F
Sbjct: 273 FAAMGEKLNDIEPFFPDRMASRILGMGDVLSLIEKAQEAYDEKKAIELEKKMRTMTFTLE 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG + ++GM+PG+ + EK + EA+I++MT +ER P +
Sbjct: 333 DFLDQMQQIKKMGPIGDLLGMMPGVDSKALKDIDIDEKQMGRTEAIIQSMTRKERLDPSI 392
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 391
+ S RRKR++ SG T Q+V+ L+ Q Q
Sbjct: 393 INGS--RRKRISAGSGTTIQEVNALLKQFEQ 421
>gi|153940237|ref|YP_001391747.1| signal recognition particle protein [Clostridium botulinum F str.
Langeland]
gi|170754416|ref|YP_001781992.1| signal recognition particle protein [Clostridium botulinum B1 str.
Okra]
gi|384462755|ref|YP_005675350.1| signal recognition particle protein [Clostridium botulinum F str.
230613]
gi|429243872|ref|ZP_19207356.1| signal recognition particle protein [Clostridium botulinum
CFSAN001628]
gi|152936133|gb|ABS41631.1| signal recognition particle protein [Clostridium botulinum F str.
Langeland]
gi|169119628|gb|ACA43464.1| signal recognition particle protein [Clostridium botulinum B1 str.
Okra]
gi|295319772|gb|ADG00150.1| signal recognition particle protein [Clostridium botulinum F str.
230613]
gi|428759078|gb|EKX81467.1| signal recognition particle protein [Clostridium botulinum
CFSAN001628]
Length = 449
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/393 (49%), Positives = 288/393 (73%), Gaps = 3/393 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+++V+E+ +G ++ + P QQ++KIV +EL +LMG
Sbjct: 32 MREVKLALLEADVNYKVVKNFIKSVTEKCMGNEVLESLTPGQQVIKIVNEELTELMGSTE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L + S TVI+L GLQG GKTT++ KLA +L+K+ K +LVA DVYRPAAI QL ++
Sbjct: 92 STLNSSTSGLTVIMLVGLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV+T G ++ P I+K +E AK +VVI+DTAGRL ID+ +MDEL ++K
Sbjct: 152 GKQIDIPVFTMGDKLNPVDISKAAIEHAKNNKNNVVIIDTAGRLHIDEELMDELHNIKEE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP+E+LLVVDAMTGQ+A + FN ++ I+G ILTKLDGD+RGGAALS+K ++GKPIK
Sbjct: 212 VNPSEILLVVDAMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAALSIKSMTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + +E A+E+ +++++ F+F
Sbjct: 272 FVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEEKAKEIGERMLNQEFNFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+ + + ++G +++++ MIPGM ++ + +EK +K EA+I +MT +ER P
Sbjct: 332 DFLESMQQMKKLGPINKLLEMIPGMNSKELKNIDLSSSEKEMKKTEAIISSMTIKERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 391
L++ SP R++R+A+ SG Q V++L+ FQ
Sbjct: 392 SLISSSPSRKRRIAKGSGTNVQNVNKLLKD-FQ 423
>gi|375088729|ref|ZP_09735067.1| signal recognition particle protein [Dolosigranulum pigrum ATCC
51524]
gi|374561694|gb|EHR33033.1| signal recognition particle protein [Dolosigranulum pigrum ATCC
51524]
Length = 512
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/414 (50%), Positives = 293/414 (70%), Gaps = 14/414 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VVR F+++V E+A+G ++ V Q+VKIV DEL +LMGGE
Sbjct: 32 MREVRLALLEADVNYKVVREFIKSVREKAIGSEVLENVEGGHQVVKIVSDELTELMGGER 91
Query: 61 SELVFAKSRP---TVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQ 116
+++ A S P TV ++ GLQG GKTT + KL+NYL+K MLVA D+YRPAAIDQ
Sbjct: 92 QDIITA-SEPGEITVYMMVGLQGAGKTTTAGKLSNYLRKHENMKPMLVAADIYRPAAIDQ 150
Query: 117 LVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD 176
L +G+++ +PV++ G +V P +IA++G++EAK +N +VVI+DTAGRL ID A+M EL D
Sbjct: 151 LQQVGKELNIPVFSMGDDVSPVEIARRGVQEAKDENRNVVIIDTAGRLHIDDALMTELSD 210
Query: 177 VKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSG 236
+K +NP E+ LVVDAMTGQ+A + TFN ++ I+ ILTKLDGD+RGGAALS+ +V+
Sbjct: 211 IKSEVNPHEIFLVVDAMTGQDAVNVSDTFNKQLDISSVILTKLDGDTRGGAALSISKVTN 270
Query: 237 KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN 296
KPIK G GE+++ LEPFYP+RMA RILGMGD+L+ VE+AQ+ M + AEE+ +K+
Sbjct: 271 KPIKFTGTGEKLDALEPFYPERMANRILGMGDILTLVERAQQEMDDKRAEELAQKMAEQT 330
Query: 297 FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEE 354
+DFNDF++Q + MG + +I MIPGM + P Q EK L M+A++ +MTPEE
Sbjct: 331 YDFNDFIEQMDQMRNMGPLEDLIKMIPGMSNL-PGMDQFEVDEKDLDRMKAIVLSMTPEE 389
Query: 355 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 408
R+ P++L+++ RRKR+A +G+T V++L+ Q Q K LMG M G +
Sbjct: 390 RKNPDILSQN--RRKRIADGAGRTLLDVNKLITQFKQ----SKELMGDMSSGKM 437
>gi|325680130|ref|ZP_08159696.1| signal recognition particle protein [Ruminococcus albus 8]
gi|324108205|gb|EGC02455.1| signal recognition particle protein [Ruminococcus albus 8]
Length = 457
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/408 (49%), Positives = 289/408 (70%), Gaps = 6/408 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++++ ALLEADVS VV+ FV V+E++VG +++ + P QQ++KIV DELVKLMG
Sbjct: 32 MKEVKMALLEADVSYKVVKDFVANVTERSVGEDVLKSLTPGQQVIKIVNDELVKLMGEAN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ F P VI++ GLQG GKTT +AKLA K+QG +L+A DVYRPAAIDQL I+
Sbjct: 92 SKINFPSKPPCVIMMCGLQGSGKTTHAAKLAKMFKRQGNRPLLIAADVYRPAAIDQLKIV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
E+ VPV+ G ++ P +I KQGL++AK D+VI+DTAGRL ID+ +MDELKD+K++
Sbjct: 152 AEKADVPVFEMG-QIDPRKIVKQGLKQAKDYGNDLVIIDTAGRLHIDEELMDELKDIKKI 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P+E++LVVDAM GQ+A + ++F+ +GI ILTKLD D+RGGAALSV V+GKPIK
Sbjct: 211 AEPSEIMLVVDAMIGQDAVKVASSFDEALGIDSVILTKLDSDTRGGAALSVLAVTGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++++ EPF+P+RMA RILGMGD+L+ +E+A + + +E+AE++ KK+ S FD N
Sbjct: 271 FVGMGEKLDEFEPFHPERMASRILGMGDMLTLIERATQTVDEEEAEKLAKKLQSEGFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
D L Q + + +MGS+ +I M+PG KIT + E +L+ EAMI +MT ER +P++
Sbjct: 331 DLLDQMKQIQKMGSVKSIIQMLPGANKITDEDLESGEAALRKTEAMINSMTKAERARPQI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 408
+ P R++R+A SG V+QL+ Q M+ MK MG+ GG +
Sbjct: 391 I--DPKRKRRIAAGSGTQVSDVNQLLKQYDAMKKMMKE-MGI--GGGM 433
>gi|288800175|ref|ZP_06405634.1| signal recognition particle protein [Prevotella sp. oral taxon 299
str. F0039]
gi|288333423|gb|EFC71902.1| signal recognition particle protein [Prevotella sp. oral taxon 299
str. F0039]
Length = 446
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/420 (48%), Positives = 290/420 (69%), Gaps = 13/420 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRRALLDADVNFKVAKNFTDTVKQKAMGMNVLTAVKPSQLMVKIVHDELAELMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ P++IL++GLQG GKTT + KLAN LK KQ K +LVA DVYRPAAI+QL++
Sbjct: 91 AEVKLT-GHPSIILMSGLQGSGKTTFTGKLANLLKTKQNKKPLLVACDVYRPAAIEQLMV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+GVPVY+ +IA+ G++EAK K DVV++DTAGRL ID+ MM+E+ +K
Sbjct: 150 VGEQIGVPVYSEIENKNVVEIAQHGIQEAKAKGYDVVLIDTAGRLAIDEEMMNEISKLKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ PTE L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 SVQPTETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKMEAIDLFHPSRMADRILGMGDIVSLVERAQEQFDEEEAKRLQKKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFLKQ + +MG++ + MIPG+GK + + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFLKQIEQIKKMGNLKDLASMIPGVGKAVK-DLDIDDNAFKGVEAIIKSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGSLPAL 411
++ S RR+R+A+ SG Q+V++L+ Q Q R MK N+M M+G +P +
Sbjct: 389 IINTS--RRQRIAKGSGTDIQEVNRLMKQFDQTRKMMKMVTGNGMANMMSRMKGMKMPGM 446
>gi|390934862|ref|YP_006392367.1| signal recognition particle protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570363|gb|AFK86768.1| signal recognition particle protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 446
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/399 (48%), Positives = 280/399 (70%), Gaps = 2/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++++ ALLEADV+ VV+ F+ V+E+++G ++ + P Q ++KIV DEL LMG +
Sbjct: 32 MKEVKIALLEADVNFKVVKEFINTVTEKSLGQEVMESLTPAQHVIKIVNDELTALMGSKE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ F+ PTVI++ GLQG GKTT S KLANYLK +GKS +LVA D+YRPAAI QL ++
Sbjct: 92 SKINFSDKPPTVIMMVGLQGSGKTTTSGKLANYLKSKGKSPVLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G + VPV++ G + P IAK ++ AK N +VVI+DTAGRL +D+ +MDELK++K
Sbjct: 152 GSSINVPVFSMGDKTSPVDIAKASIDFAKNNNYNVVIIDTAGRLHVDEELMDELKNIKDA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P E+LLVVDAMTGQ+ + +FN ++ + G ILTKLDGD+RGGAALSVK V+ KPIK
Sbjct: 212 VHPDEILLVVDAMTGQDVVNVAESFNEKLDVDGVILTKLDGDTRGGAALSVKAVTHKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+ GE+ D+E F+PDRMA RILGMGDVLS +EKAQ + ++ A E+QKKI+ F F+
Sbjct: 272 FIASGEKFTDIEVFHPDRMASRILGMGDVLSLIEKAQAQIDEKKALELQKKILEQQFSFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + MG + ++ MIPG+ + ++K +K +EA+I++MT EER+ P +
Sbjct: 332 DFLDQLQGLKNMGPIDQLFSMIPGVNMSKLKGINISDKDIKRIEAIIQSMTKEERQNPSI 391
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S R+KR+A SG + QQV+ L+ Q Q + MK
Sbjct: 392 INGS--RKKRIAAGSGTSIQQVNSLLKQFEQTKKMMKQF 428
>gi|219669778|ref|YP_002460213.1| signal recognition particle protein [Desulfitobacterium hafniense
DCB-2]
gi|219540038|gb|ACL21777.1| signal recognition particle protein [Desulfitobacterium hafniense
DCB-2]
Length = 453
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/399 (51%), Positives = 286/399 (71%), Gaps = 4/399 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+++G ++ + P QQ++KIV +E+V LMGG
Sbjct: 31 MREVRMALLEADVNFKVVKDFVAKVKERSIGQEVLESLSPGQQVIKIVNEEMVALMGGVS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ + PTVI+L GLQG GKTT AKLAN LKKQGK +LVA D+YRPAAI QL +L
Sbjct: 91 SKINISSKPPTVIMLVGLQGAGKTTHGAKLANMLKKQGKHPLLVACDIYRPAAIKQLEVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV++ G E P +IA L+ A + +DVVI+DTAGRL I++ +M EL+++K
Sbjct: 151 GEQIKVPVFSLGQE-NPVKIAAASLQHANSQGLDVVIIDTAGRLHINEELMGELREIKTA 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGGAALSVK V+G PIK
Sbjct: 210 VKPHEILLVVDAMTGQDAVNVAESFHNELGVDGIILTKLDGDTRGGAALSVKAVTGCPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+M+ +EPF+P+RMA RILGMGDVL+ +EKAQE ++ A EM++K+ F +
Sbjct: 270 FAGVGEKMDAIEPFFPERMASRILGMGDVLTLIEKAQEAFDEKQAREMEQKLRKQEFTLD 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG ++ ++ MIPG+GK V+ EK + +EA+I +MT EER KP L
Sbjct: 330 DFLDQMQQLKKMGPLNSLLEMIPGVGK-QMKDVQVDEKDMAHVEAIIHSMTAEERRKPAL 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ +S R++R+A+ SG + Q+V +L+ Q QM+ MK
Sbjct: 389 IKDS--RKRRIAKGSGTSVQEVGRLLKQFEQMQKMMKQF 425
>gi|371777551|ref|ZP_09483873.1| signal recognition particle protein [Anaerophaga sp. HS1]
Length = 444
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/414 (50%), Positives = 285/414 (68%), Gaps = 8/414 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++DIRRALL+ADV+ + F + V E+A+G ++ V+P Q +VKIV DEL +LMGG
Sbjct: 31 LKDIRRALLDADVNYKTAKTFTETVKEKALGQNVLTAVKPQQMMVKIVHDELAQLMGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+++ K P VIL+AGLQG GKTT S KLAN +K K+GK +LVAGDVYRPAAI+QL +
Sbjct: 91 TDINL-KGNPAVILIAGLQGSGKTTFSGKLANLIKSKRGKHPVLVAGDVYRPAAINQLQV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+GVPVYT P +IAK G++EAK K DVVI+DTAGRL ID+ MM+E+ +K
Sbjct: 150 LGEQIGVPVYTEEGNTDPVKIAKAGIKEAKAKGHDVVIIDTAGRLAIDEEMMNEISAIKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAA+S++ V KPI
Sbjct: 210 AVKPHETLFVVDAMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAISIRSVVDKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ L+ F+P RMA RILGMGD++S VEKAQE E+A ++QKKI F+F
Sbjct: 270 KFVGMGEKMDALDVFHPSRMADRILGMGDIVSLVEKAQEQYDAEEARKLQKKIAKNQFNF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFL Q R + +MG++ + MIPGMGK+ V + + K +EA+I +MTP+ER+ P
Sbjct: 330 DDFLGQIRQIKKMGNLKDLAAMIPGMGKMLK-NVDIDDDAFKGVEAIISSMTPQERQNPS 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSN 413
++ S RRKR+A SG + Q+V++L+ Q R M+ + +G +L + N
Sbjct: 389 IINGS--RRKRIAAGSGTSIQEVNRLIKQFEDTRKAMRMM---TQGKNLSKMMN 437
>gi|424827553|ref|ZP_18252340.1| signal recognition particle protein [Clostridium sporogenes PA
3679]
gi|365979993|gb|EHN16034.1| signal recognition particle protein [Clostridium sporogenes PA
3679]
Length = 449
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/393 (49%), Positives = 288/393 (73%), Gaps = 3/393 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+++V+E+ +G ++ + P QQ++KIV +EL +LMG
Sbjct: 32 MREVKLALLEADVNYKVVKNFIKSVTEKCMGNEVLESLTPGQQVIKIVNEELTELMGSTE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L + S TVI+L GLQG GKTT++ KLA +L+K+ K +LVA DVYRPAAI QL ++
Sbjct: 92 STLNSSTSGLTVIMLVGLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV+T G ++ P I+K +E AK +VVI+DTAGRL ID+ +MDEL ++K
Sbjct: 152 GKQIDIPVFTMGDKLSPVDISKAAIEHAKNNKNNVVIIDTAGRLHIDEELMDELHNIKEE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTE+LLVVD+MTGQ+A + FN ++ I+G ILTKLDGD+RGGAALS+K ++GKPIK
Sbjct: 212 VNPTEILLVVDSMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAALSIKSMTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + ++ A+E+ +++++ F+F
Sbjct: 272 FVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEDKAKEIGERMLNQEFNFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+ + + ++G +++++ MIPGM ++ + +EK +K EA+I +MT +ER P
Sbjct: 332 DFLESMQQMKKLGPINKLLEMIPGMNSKELKNIDLSSSEKEMKKTEAIISSMTIKERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 391
L++ SP R++R+A+ SG Q V++L+ FQ
Sbjct: 392 SLISSSPSRKRRIAKGSGTNVQHVNKLLKD-FQ 423
>gi|187778958|ref|ZP_02995431.1| hypothetical protein CLOSPO_02553 [Clostridium sporogenes ATCC
15579]
gi|187772583|gb|EDU36385.1| signal recognition particle protein [Clostridium sporogenes ATCC
15579]
Length = 449
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/393 (49%), Positives = 288/393 (73%), Gaps = 3/393 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+++V+E+ +G ++ + P QQ++KIV +EL +LMG
Sbjct: 32 MREVKLALLEADVNYKVVKNFIKSVTEKCMGNEVLGSLTPGQQVIKIVNEELTELMGSTE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L + S TVI+L GLQG GKTT++ KLA +L+K+ K +LVA DVYRPAAI QL ++
Sbjct: 92 STLNSSTSGLTVIMLVGLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV+T G ++ P I+K +E AK +VVI+DTAGRL ID+ +MDEL ++K
Sbjct: 152 GKQIDIPVFTMGDKLSPVDISKAAIEHAKNNKNNVVIIDTAGRLHIDEELMDELHNIKEE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NPTE+LLVVDAMTGQ+A + FN ++ I+G ILTKLDGD+RGGAALS+K ++GKPIK
Sbjct: 212 VNPTEILLVVDAMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAALSIKSMTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + ++ A+E+ +++++ F+F
Sbjct: 272 FVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEDKAKEIGERMLNQEFNFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+ + + ++G +++++ MIPGM ++ + +EK +K EA+I +MT +ER P
Sbjct: 332 DFLESMQQMKKLGPINKLLEMIPGMNSKELKNIDLSSSEKEMKKTEAIISSMTIKERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 391
L++ SP R++R+A+ SG Q V++L+ FQ
Sbjct: 392 SLISSSPSRKRRIAKGSGTNVQHVNKLLKD-FQ 423
>gi|300728157|ref|ZP_07061528.1| signal recognition particle protein [Prevotella bryantii B14]
gi|299774583|gb|EFI71204.1| signal recognition particle protein [Prevotella bryantii B14]
Length = 449
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/423 (50%), Positives = 286/423 (67%), Gaps = 19/423 (4%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M+DIRRALL+ADV+ V + F V E+A+G ++ V P Q LVK+V DEL +LMGGE
Sbjct: 31 MKDIRRALLDADVNFKVAKDFTNRVKEKALGQNVLTAVSPGQMLVKLVHDELAELMGGES 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ + RP +IL++GLQG GKTT S KLAN LK KQ K+ +LVA DVYRPAAIDQL +
Sbjct: 91 VPMKL-EGRPAIILMSGLQGSGKTTFSGKLANLLKAKQHKNPLLVACDVYRPAAIDQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GE VGVPVY IA L+EAK K+ DVVI+DTAGRL ID+ MM E+ ++K
Sbjct: 150 VGESVGVPVYCEPENKDVLSIADHALQEAKAKSHDVVIIDTAGRLAIDEQMMTEISNLKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 HVHPDETLFVVDSMTGQDAVNTAKEFNERLDFDGVVLTKLDGDTRGGAALSIRTVVDKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME L+ F+P RMA RILGMGDV+S VE+AQE +E+A+++QKKI FDF
Sbjct: 270 KFIGTGEKMEALDVFHPSRMADRILGMGDVVSLVERAQEQFDEEEAKKLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMTPEERE 356
NDFL Q + +MG++ + MIPG+GK +R+ E + K +EA+I++MTPEER
Sbjct: 330 NDFLNQIEQIKKMGNLKDLASMIPGVGK----AIRDVEIDDNAFKGIEAIIKSMTPEERS 385
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGSL 408
PE+L S RRKR+A+ SG Q+V++L+ Q Q R MK ++M M+G ++
Sbjct: 386 HPEILNSS--RRKRIAKGSGTDIQEVNRLIKQFDQTRKMMKMVTGNKMASMMARMKGMNI 443
Query: 409 PAL 411
P +
Sbjct: 444 PGM 446
>gi|365853514|ref|ZP_09393781.1| signal recognition particle protein [Lactobacillus parafarraginis
F0439]
gi|363712139|gb|EHL95838.1| signal recognition particle protein [Lactobacillus parafarraginis
F0439]
Length = 478
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/417 (49%), Positives = 295/417 (70%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VVR+FV+ V ++A G ++ G+ P QQ+VKIV +EL K MG E
Sbjct: 32 MREIRLALLEADVNFQVVRQFVKTVEDRAKGSKVLEGLNPSQQIVKIVDEELTKTMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L A PT+I+++GLQG GKTT KLA LK +Q +L+A DVYRPAAI+QL
Sbjct: 92 VGLNKAPKIPTIIMMSGLQGAGKTTTVGKLALKLKNEQNARPLLIADDVYRPAAIEQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV+ GT+V P +IAKQGL++A++ + D VI+DTAGRLQID+ +MDELK++K
Sbjct: 152 VGQQIDVPVFEMGTDVDPVEIAKQGLKKAQEDHNDYVIIDTAGRLQIDEKLMDELKNIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E+LLV+DAMTGQ A A F+ + +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 AVHPNEILLVIDAMTGQNAVATAEGFDKTLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+M DL+ F+PDRMA RILGMGD+LS +EK Q+ ++ A+E+ +KI +FDF
Sbjct: 272 KFVGQGEKMTDLDVFHPDRMASRILGMGDMLSLIEKTQKEYDEKQAQELSEKIKENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q + +MG + ++ MIPGM PA V K + ++A+I +MT +ER
Sbjct: 332 NDFLDQLDQIQKMGPLDEIMKMIPGMAN-NPAMKNVNMDPKDMDHLKAIIYSMTEQERTD 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+++ +P RR+R+A+ SG+ Q+V++++ Q Q MK +M + G++ + N+
Sbjct: 391 PDIM--NPSRRRRIARGSGRPIQEVNRMIKQFNQ----MKTMMNKVSKGNMSGMENM 441
>gi|261408023|ref|YP_003244264.1| signal recognition particle protein [Paenibacillus sp. Y412MC10]
gi|261284486|gb|ACX66457.1| signal recognition particle protein [Paenibacillus sp. Y412MC10]
Length = 460
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/418 (48%), Positives = 293/418 (70%), Gaps = 5/418 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+A+G ++ P ++ IV EL +LMGG
Sbjct: 32 MREVRLALLEADVNFKVVKDFVSKVKEKAIGKEVMDSFTPGMVIIDIVNKELTELMGGSQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L + PTVI++AGLQG GKTT S KLA L+KQ +LVAGD+YRPAAI QL +L
Sbjct: 92 AKLAKSNKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNSKPLLVAGDIYRPAAIKQLEVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV++ G + P +IAKQGL+ AK D VI+DTAGRL +D+ +M+ELK + V
Sbjct: 152 GNQINVPVFSLGDKTSPVEIAKQGLQHAKDNGHDYVIIDTAGRLHVDEELMEELKQIHSV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 VNPDEVLLVVDAMTGQDAVNVAESFNQQLTLTGVVLTKLDGDTRGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + + A+EM++K+ +A F F
Sbjct: 272 FAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEMERKMRNAEFTFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V ++G + +++ MIPGMGK+ A+ ++ EK + +EA++ +MT E+++P+
Sbjct: 332 DFLEQMDQVKKLGPLDQLMDMIPGMGKMKQAKDLKVDEKQMGRIEAIVHSMTTAEKQQPD 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALSNLE 415
++ + RRKR+A SG + +V++L+ Q +MR MK +M +GG AL L+
Sbjct: 392 IINHN--RRKRIAAGSGTSLAEVNRLIKQFDEMRRVMKQFSDMMGPKGGKNKALKQLK 447
>gi|152976211|ref|YP_001375728.1| signal recognition particle protein [Bacillus cytotoxicus NVH
391-98]
gi|152024963|gb|ABS22733.1| signal recognition particle protein [Bacillus cytotoxicus NVH
391-98]
Length = 449
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/404 (49%), Positives = 295/404 (73%), Gaps = 4/404 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVSERAVGQDVMKSLTPGQQVIKVVQEELTGLMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+++ D V++DTAGRL ID+ +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHHDYVLIDTAGRLHIDEELMDELAKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VANPDEIFLVVDAMTGQDAVNVAKSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ +EPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDAIEPFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V ++G + ++GM+PG KI + + +K + +EA+I +MT ERE+P
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAKVDDKQIGHIEAIIRSMTKLEREQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
E++ S R+KR+A+ SG T Q++++L+ Q M+ MK L G+
Sbjct: 392 EIINAS--RKKRIAKGSGTTVQEINRLLKQFEDMKKMMKTLTGM 433
>gi|148544379|ref|YP_001271749.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus reuteri DSM 20016]
gi|184153743|ref|YP_001842084.1| signal recognition particle protein [Lactobacillus reuteri JCM
1112]
gi|227363196|ref|ZP_03847330.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
MM2-3]
gi|325682699|ref|ZP_08162215.1| signal recognition particle protein [Lactobacillus reuteri MM4-1A]
gi|148531413|gb|ABQ83412.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus reuteri DSM 20016]
gi|183225087|dbj|BAG25604.1| signal recognition particle protein [Lactobacillus reuteri JCM
1112]
gi|227071802|gb|EEI10091.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
MM2-3]
gi|324977049|gb|EGC14000.1| signal recognition particle protein [Lactobacillus reuteri MM4-1A]
Length = 481
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/419 (49%), Positives = 287/419 (68%), Gaps = 13/419 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A G +++G+ P QQ+VKIV DEL KLMG E
Sbjct: 32 MREIRLALLEADVNFKVVKDFVKTVREKAAGAEVLKGLNPAQQIVKIVNDELTKLMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++ GLQG GKTT + KLA LK + + M +A DVYRPAAI QL
Sbjct: 92 VPLNKAPHIPTVIMMVGLQGAGKTTTAGKLALRLKNENHARPMFIAADVYRPAAITQLQQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ +Q+ VPV+ GT+V P +I ++G+E A+K + D VI+DTAGRLQID+ +MDEL ++K
Sbjct: 152 VADQIDVPVFEKGTDVDPVEIVREGMEVAQKNHNDYVIIDTAGRLQIDEQLMDELANIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++NP E+LLV+D+MTGQ A F+ ++ ITG ILTKLDGD+RGGAA+S++ V+GKPI
Sbjct: 212 LVNPNEILLVIDSMTGQNAVNTAQGFDDKLDITGVILTKLDGDTRGGAAMSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E K+ FD+
Sbjct: 272 KFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETMDKMRENTFDY 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q V +MG + +I M+PGM PA + K + A++ +MTPEERE
Sbjct: 332 NDFLAQMDQVTKMGPLENIIKMMPGMAN-NPALKNLNLDPKQFAHIRAIVLSMTPEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-------NLMGVMEGGSLP 409
P+++ +P RR+R+A +G+ +V++++ Q QMR MK N M M GG +P
Sbjct: 391 PDIM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQVTNGNFNGMQNMFGGQMP 447
>gi|125973288|ref|YP_001037198.1| signal recognition particle subunit FFH/SRP54 (srp54) [Clostridium
thermocellum ATCC 27405]
gi|256003768|ref|ZP_05428756.1| signal recognition particle protein [Clostridium thermocellum DSM
2360]
gi|281417492|ref|ZP_06248512.1| signal recognition particle protein [Clostridium thermocellum JW20]
gi|385778800|ref|YP_005687965.1| signal recognition particle protein [Clostridium thermocellum DSM
1313]
gi|419723183|ref|ZP_14250318.1| signal recognition particle protein [Clostridium thermocellum AD2]
gi|419724913|ref|ZP_14251968.1| signal recognition particle protein [Clostridium thermocellum YS]
gi|125713513|gb|ABN52005.1| signal recognition particle protein [Clostridium thermocellum ATCC
27405]
gi|255992329|gb|EEU02423.1| signal recognition particle protein [Clostridium thermocellum DSM
2360]
gi|281408894|gb|EFB39152.1| signal recognition particle protein [Clostridium thermocellum JW20]
gi|316940480|gb|ADU74514.1| signal recognition particle protein [Clostridium thermocellum DSM
1313]
gi|380771533|gb|EIC05398.1| signal recognition particle protein [Clostridium thermocellum YS]
gi|380780950|gb|EIC10613.1| signal recognition particle protein [Clostridium thermocellum AD2]
Length = 446
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/386 (50%), Positives = 279/386 (72%), Gaps = 2/386 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+I+ ALLEADV+ VV+ F+ VSE+AVG ++ + P QQ++KIV +EL+ LMG
Sbjct: 32 MREIKLALLEADVNFKVVKDFIGKVSERAVGQEVLESLTPGQQVIKIVHEELINLMGSAN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ F+ PT+ ++ GLQG GKTT S KLAN L+KQGK +LVA DVYRPAAI QL ++
Sbjct: 92 SKVTFSSKPPTIYMMVGLQGSGKTTTSGKLANLLRKQGKKPLLVACDVYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+G+ V++ G + P IAK +E AK + D+VI+DTAGRL I++ +M+EL+++K
Sbjct: 152 GSQLGIEVFSMGDKTNPVDIAKAAVEYAKSRQYDLVIIDTAGRLHINEELMEELQNIKEA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + +FN ++G+ G ILTKLDGD+RGGAALSVK V+GKPIK
Sbjct: 212 VRPQEILLVVDSMTGQDAVNVAESFNEKLGVDGIILTKLDGDTRGGAALSVKAVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+EPF+PDRMA RILGMGDVLS +EKAQE ++ A E++KK+ + F
Sbjct: 272 FIGMGEKLNDIEPFFPDRMASRILGMGDVLSLIEKAQEAFDEKKALELEKKMRTQQFTLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q + + +MG +++++ MIPG + EK + +EA+I++MT EER P +
Sbjct: 332 DFLEQMQQIKKMGPLNQLLAMIPGFNANVMKDIELDEKKMARVEAIIKSMTKEERNNPSI 391
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLV 386
+ S RRKR+A SG T Q+V++L+
Sbjct: 392 INGS--RRKRIAAGSGTTVQEVNKLL 415
>gi|288924926|ref|ZP_06418862.1| signal recognition particle protein [Prevotella buccae D17]
gi|288338116|gb|EFC76466.1| signal recognition particle protein [Prevotella buccae D17]
Length = 447
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/402 (51%), Positives = 280/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M+D+RRALL+ADV+ V + F V E+A+G+ ++ V+P Q +VK+V DEL +LMGGE
Sbjct: 31 MKDVRRALLDADVNFKVAKNFTNTVKEKALGMNVLTAVKPGQLMVKLVHDELAELMGGED 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ LV K+RP +IL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAIDQL +
Sbjct: 91 APLVL-KNRPAIILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAIDQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGVPVY IA L+EAK KN DVVI+DTAGRL +D+ MM E+ ++K+
Sbjct: 150 VGEQVGVPVYAEPDNKDVIAIAANALKEAKAKNYDVVIIDTAGRLAVDEQMMTEISNLKQ 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AVSPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A +QKKI FDF
Sbjct: 270 KFIGTGEKMEAIDVFHPARMADRILGMGDVVSLVERAQEQFDEEEARRLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK V + + K +E++I++MTP+ER PE
Sbjct: 330 NDFLNQIEQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIESIIKSMTPKERSNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S RR+R+A+ SG Q V++L+ Q Q R MK + G
Sbjct: 389 ILNSS--RRQRIAKGSGTNIQDVNRLIKQFDQTRKMMKMVTG 428
>gi|315303701|ref|ZP_07874216.1| signal recognition particle protein [Listeria ivanovii FSL F6-596]
gi|313627928|gb|EFR96546.1| signal recognition particle protein [Listeria ivanovii FSL F6-596]
Length = 450
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/401 (50%), Positives = 294/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIKTVSERAVGADVMKSLTPGQQVIKIVQEELTNLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+ ++D VI+DTAGRL ID+ +MDELK VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEDHLDYVIIDTAGRLHIDETLMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IATPTEILLVVDSMTGQDAVNVAESFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ +
Sbjct: 272 KFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKDNSMTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I++MT E++ P
Sbjct: 332 DDFLEQLQQVKQMGPLDELLKMMPGAGKMKGLDNMQVDDKQLGHIEAIIKSMTKNEKDNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 392 DIINAS--RRKRIARGSGRPIQEINRLLKQFTEMKKMMKQM 430
>gi|138894717|ref|YP_001125170.1| Signal recognition particle subunit Ffh/SRP54 [Geobacillus
thermodenitrificans NG80-2]
gi|134266230|gb|ABO66425.1| Signal recognition particle, subunit Ffh/SRP54 [Geobacillus
thermodenitrificans NG80-2]
Length = 455
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/391 (50%), Positives = 288/391 (73%), Gaps = 4/391 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+AVG +++ + P QQ++K+V++EL LMGGE
Sbjct: 41 MREVRLALLEADVNFKVVKDFIKRVSERAVGQEVLKSLTPGQQVIKVVKEELTALMGGEQ 100
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTV+++ GLQG GKTT + KLAN L+K + +LVA DVYRPAAI QL
Sbjct: 101 SKIAVAKKPPTVVMMVGLQGAGKTTTTGKLANLLRKRHNRKPLLVAADVYRPAAIKQLET 160
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G P +IAKQ LE AK+++ D V++DTAGRL +D+A+MDELK ++
Sbjct: 161 LGKQLNMPVFSLGEHANPVEIAKQALERAKEEHHDYVLIDTAGRLHVDEALMDELKQMRE 220
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V+G PI
Sbjct: 221 AVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAVTGAPI 280
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +A F F
Sbjct: 281 KFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRTATFTF 340
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q V ++G + ++ M+PG KI ++ EK + +EA+I +MT EE+ P
Sbjct: 341 DDFLDQLGQVRKLGPLDEILKMLPGANKIKGLDNIQVDEKQIARVEAIIRSMTKEEKMHP 400
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
E++ S R+KR+A+ SG T Q+V++L+ Q
Sbjct: 401 EIINGS--RKKRIAKGSGTTVQEVNRLLKQF 429
>gi|304404220|ref|ZP_07385882.1| signal recognition particle protein [Paenibacillus curdlanolyticus
YK9]
gi|304347198|gb|EFM13030.1| signal recognition particle protein [Paenibacillus curdlanolyticus
YK9]
Length = 449
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/404 (50%), Positives = 284/404 (70%), Gaps = 3/404 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V EQAVG+ + + P +V IV EL++LMGG
Sbjct: 20 MREVRLALLEADVNFKVVKDFVAKVKEQAVGIEVQKSFTPGMVVVDIVHKELIELMGGSA 79
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+++ A PTVIL+AGLQG GKTT +AKLA L K +L+AGD+YRPAAI QL +L
Sbjct: 80 TQIAKASKPPTVILMAGLQGAGKTTTTAKLAKMLMKNNHKPLLIAGDIYRPAAIKQLQVL 139
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+G V+T G +V P +IA+QGL+ AK + D VIVDTAGRLQID+A+MDE+K + V
Sbjct: 140 GEQIGAQVFTLGNDVSPVEIARQGLQHAKANSFDYVIVDTAGRLQIDEALMDEIKQIHAV 199
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVDAMTGQEA + +F+ ++ +TG +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 200 VEPDEVLLVVDAMTGQEAVNVAQSFHEQLELTGVVLTKLDGDTRGGAALSVKAVTGCPIK 259
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
V GE++E LE F+P+RMA RILGMGD+LS +EKAQ + + A EM++K+ +A F F
Sbjct: 260 FVATGEKIEPLEAFHPERMASRILGMGDMLSLIEKAQSNIDADKAAEMERKMRNAEFTFE 319
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL Q V ++G + +++ M+PGM K+ + ++ +K + +EA++ +MT +E+ P+
Sbjct: 320 DFLDQMEQVRKLGPLDQLLDMLPGMNKVKGLKDMKVDDKQIGRVEAIVRSMTTDEKRNPD 379
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 403
LL S RR+R+A SG V++L+ Q +MR MK G+M
Sbjct: 380 LLNYS--RRRRIAAGSGTQIADVNRLIKQFDEMRKMMKQFSGMM 421
>gi|329929595|ref|ZP_08283302.1| signal recognition particle protein [Paenibacillus sp. HGF5]
gi|328936240|gb|EGG32692.1| signal recognition particle protein [Paenibacillus sp. HGF5]
Length = 460
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/418 (48%), Positives = 293/418 (70%), Gaps = 5/418 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+A+G ++ P ++ IV EL +LMGG
Sbjct: 32 MREVRLALLEADVNFKVVKDFVSKVKEKAIGKEVMDSFTPGMVIIDIVNKELTELMGGSQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L + PTVI++AGLQG GKTT S KLA L+KQ +LVAGD+YRPAAI QL +L
Sbjct: 92 AKLAKSNKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNSRPLLVAGDIYRPAAIKQLEVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV++ G + P +IAKQGL+ AK D VI+DTAGRL +D+ +M+ELK + V
Sbjct: 152 GNQINVPVFSLGDKTSPVEIAKQGLQHAKDNGHDYVIIDTAGRLHVDEELMEELKQIHSV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 VNPDEVLLVVDAMTGQDAVNVAESFNQQLTLTGVVLTKLDGDTRGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + + A+EM++K+ +A F F
Sbjct: 272 FAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEMERKMRNAEFTFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V ++G + +++ MIPGMGK+ A+ ++ EK + +EA++ +MT E+++P+
Sbjct: 332 DFLEQMDQVKKLGPLDQLMDMIPGMGKMKQAKDLKVDEKQMGRIEAIVHSMTTAEKQQPD 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALSNLE 415
++ + RRKR+A SG + +V++L+ Q +MR MK +M +GG AL L+
Sbjct: 392 IINHN--RRKRIAAGSGTSLAEVNRLIKQFDEMRRVMKQFSDMMGPKGGKNKALKQLK 447
>gi|345859708|ref|ZP_08812042.1| signal recognition particle protein [Desulfosporosinus sp. OT]
gi|344327165|gb|EGW38609.1| signal recognition particle protein [Desulfosporosinus sp. OT]
Length = 451
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/399 (51%), Positives = 284/399 (71%), Gaps = 4/399 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+++G ++ + P Q ++KIV +E+++LMGG
Sbjct: 31 MREVRIALLEADVNFKVVKDFVAKVKERSIGQEVLESLSPAQYVIKIVHEEMIELMGGAT 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++ A PTVILL GLQG GKTT +AKLAN LKKQGK +LVA DVYRPAAI QL +L
Sbjct: 91 GKIPIASKPPTVILLLGLQGAGKTTHAAKLANMLKKQGKHPLLVACDVYRPAAIKQLEVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQV VPV++ G +V P +IA+ ++ A DVVI+DTAGRL I++ +M EL+D+K
Sbjct: 151 GEQVKVPVFSMG-QVSPVEIARASIKHANSNGQDVVIIDTAGRLHINEELMTELRDIKNA 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +F+ ++G+ G ILTKLDGD+RGGAALS+K V+G IK
Sbjct: 210 VKPHEILLVVDAMTGQDAVNVAESFHKDLGLDGVILTKLDGDTRGGAALSIKAVTGCTIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+M+ +EPF+PDRMA RILGMGDVL+ +EKAQE ++ A+EM++K+ F
Sbjct: 270 FAGIGEKMDAIEPFHPDRMASRILGMGDVLTLIEKAQESFDEKKAKEMEQKLRKQEFTLE 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG +S ++ MIPG+GK V+ EK +EA+I +MTPEER KP +
Sbjct: 330 DFLDQMQQMKKMGPLSSILEMIPGVGK-QLKDVQIDEKDTAHLEAIIRSMTPEERRKPSV 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ +S R+KR+A+ SG + Q V +L+ Q QM+ MK
Sbjct: 389 IKDS--RKKRIAKGSGTSVQDVGRLLKQFEQMQKMMKQF 425
>gi|315648170|ref|ZP_07901271.1| signal recognition particle protein [Paenibacillus vortex V453]
gi|315276816|gb|EFU40159.1| signal recognition particle protein [Paenibacillus vortex V453]
Length = 460
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/418 (48%), Positives = 294/418 (70%), Gaps = 5/418 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+A+G ++ P ++ IV E+ +LMGG
Sbjct: 32 MREVRLALLEADVNFKVVKDFVSKVKEKAIGKEVMDSFTPGMVIIDIVNKEMTELMGGSQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++LV + PTVI++AGLQG GKTT S KLA L+KQ +LVAGD+YRPAAI QL +L
Sbjct: 92 AKLVKSNKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNSRPLLVAGDIYRPAAIKQLEVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV++ G + P +IAKQGL+ AK D VI+DTAGRL +D+ +M+ELK + V
Sbjct: 152 GEQINVPVFSLGDKTSPVEIAKQGLQHAKDNGHDYVIIDTAGRLHVDEELMEELKQIHSV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 VNPDEVLLVVDAMTGQDAVNVAESFNQQLTLTGVVLTKLDGDTRGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + + A+EM++K+ +A F F
Sbjct: 272 FAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEMERKMRNAEFTFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V ++G + +++ MIPGMGK+ + ++ EK + +EA++ +MT E+++P+
Sbjct: 332 DFLEQMDQVKKLGPLDQLMDMIPGMGKMKQTKDLKVDEKQMGRIEAIVHSMTTAEKQQPD 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALSNLE 415
++ + RRKR+A SG + +V++L+ Q +MR MK +M +GG A+ L+
Sbjct: 392 IINHN--RRKRIAAGSGTSLAEVNRLIKQFDEMRRVMKQFSDMMGPKGGKNKAMKQLK 447
>gi|265751175|ref|ZP_06087238.1| signal recognition particle protein [Bacteroides sp. 3_1_33FAA]
gi|423228545|ref|ZP_17214951.1| signal recognition particle protein [Bacteroides dorei CL02T00C15]
gi|423243810|ref|ZP_17224886.1| signal recognition particle protein [Bacteroides dorei CL02T12C06]
gi|263238071|gb|EEZ23521.1| signal recognition particle protein [Bacteroides sp. 3_1_33FAA]
gi|392635952|gb|EIY29840.1| signal recognition particle protein [Bacteroides dorei CL02T00C15]
gi|392644176|gb|EIY37919.1| signal recognition particle protein [Bacteroides dorei CL02T12C06]
Length = 440
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/412 (50%), Positives = 283/412 (68%), Gaps = 5/412 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKGFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTALMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ELV +SRP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 AELVL-ESRPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+ VPVY+ P QIA + EAK K D+VIVDTAGRL ID+ MM+E++ +K+
Sbjct: 150 LGEQIEVPVYSELDSKNPVQIALNAIHEAKAKGYDLVIVDTAGRLAIDEQMMNEIEAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPDETLFVVDSMTGQDAVNTAREFNERLDFNGVVLTKLDGDTRGGAALSIRTVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP+ER PE
Sbjct: 330 NDFLSQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPQERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
+L + RR R+A+ SG + Q+V++L+ Q Q R MK + G G +P L
Sbjct: 389 IL--NGTRRTRIAKGSGTSIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMPKL 438
>gi|70726678|ref|YP_253592.1| hypothetical protein SH1677 [Staphylococcus haemolyticus JCSC1435]
gi|68447402|dbj|BAE04986.1| ffh [Staphylococcus haemolyticus JCSC1435]
Length = 456
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/421 (48%), Positives = 302/421 (71%), Gaps = 4/421 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VS++A+G +++ + P QQ++KIV+DEL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFVKTVSDRALGSDVMQSLTPGQQVIKIVQDELTQLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S + A PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 STIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPVY+ G +VKP QI + L+ AK++++D VI+DTAGRL ID+A+M+EL++VK
Sbjct: 152 VGKQLDVPVYSEGDQVKPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNELQEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ISKPNEIMLVVDAMTGQDAVNVAQSFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+M+ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A+++++K+ ++ F
Sbjct: 272 KFVGMSEKMDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEQKMRNSTFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ EK + ++A+I++MTP ERE P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGMDKLNMDEKQIDHIKAIIQSMTPSERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDAL 418
+L S R+KR+A+ SG++ Q+V++L+ Q M+ MK G G S +E+ L
Sbjct: 392 AVLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFSGAGRKGKKGKRSQMENML 449
Query: 419 K 419
K
Sbjct: 450 K 450
>gi|358051766|ref|ZP_09145874.1| signal recognition particle protein [Staphylococcus simiae CCM
7213]
gi|357258737|gb|EHJ08686.1| signal recognition particle protein [Staphylococcus simiae CCM
7213]
Length = 455
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ+VKIV+DEL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVVKIVQDELTQLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + A PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAIDQL
Sbjct: 92 TSITMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+EL++VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALQHAKEEHLDFVIIDTAGRLHIDEALMNELQEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ ITG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAQPNEIMLVVDAMTGQDAVNVAESFDNQLDITGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +K + ++A+I++MT EER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMNDKQIDHIKAIIQSMTKEERHNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|227536075|ref|ZP_03966124.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Sphingobacterium
spiritivorum ATCC 33300]
gi|227243972|gb|EEI93987.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Sphingobacterium
spiritivorum ATCC 33300]
Length = 445
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/400 (52%), Positives = 278/400 (69%), Gaps = 5/400 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++IR+ALL+ADV+ + F V ++A+G ++ + P Q L KI+ DEL +LMGG V
Sbjct: 31 MKEIRKALLDADVNYKTAKSFTDDVKQKALGQNVLTSISPGQLLTKIMNDELTELMGGAV 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+EL +K+ PTVIL+AGL G GKTT S KLANYLK K+GK +LVAGDVYRPAAIDQL +
Sbjct: 91 TELDISKN-PTVILIAGLNGAGKTTFSGKLANYLKDKKGKKPLLVAGDVYRPAAIDQLEV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG QVGVPV+ P IA+ G+EEAK+ +VVI+DTAGRL ID+A+M E+ VK
Sbjct: 150 LGGQVGVPVFVNRESNDPIAIAQAGVEEAKRNGHNVVIIDTAGRLAIDEALMVEITAVKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
P E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAALS+K V KPI
Sbjct: 210 ATKPQEILFVVDSMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAALSIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ ++ A E+QKKI FDF
Sbjct: 270 KFIGTGEKMEALDVFYPDRMASRILGMGDVVSLVERAQQQFDEKQAAELQKKIRKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG+M ++GMIPG+GK V + + K +EA+I++MTP ERE P+
Sbjct: 330 NDFKSQIQQIKKMGNMKDLMGMIPGVGKAL-KDVEVDDNAFKPIEAIIDSMTPFERENPD 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ + RR R+A+ SG +V++L+ Q MR MK +
Sbjct: 389 AIDQK--RRIRIAKGSGTDINEVNKLMKQFGDMRKVMKQM 426
>gi|239636284|ref|ZP_04677286.1| signal recognition particle protein [Staphylococcus warneri L37603]
gi|417643578|ref|ZP_12293620.1| signal recognition particle protein [Staphylococcus warneri VCU121]
gi|445059843|ref|YP_007385247.1| signal recognition particle protein [Staphylococcus warneri SG1]
gi|239597639|gb|EEQ80134.1| signal recognition particle protein [Staphylococcus warneri L37603]
gi|330685685|gb|EGG97326.1| signal recognition particle protein [Staphylococcus epidermidis
VCU121]
gi|443425900|gb|AGC90803.1| signal recognition particle protein [Staphylococcus warneri SG1]
Length = 455
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+A+G +++ + P QQ++KIV+DEL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKTVSERALGSDVMQSLTPGQQVIKIVQDELTNLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S + A PTV+++ GLQG GKTT + KLA + KK K MLVAGD+YRPAAIDQL
Sbjct: 92 STIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAGDIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPVY+ G +VKP QI + L AK++++D VI+DTAGRL ID+A+M+EL++VK
Sbjct: 152 VGKQLDVPVYSEGDQVKPQQIVQNALAHAKEEHLDFVIIDTAGRLHIDEALMNELQEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + Q+ A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQDKAKDLEKKMRDSSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ Q+ ++K + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDQLNMSDKQIDHIKAIIQSMTPSERANP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 AMLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|333897182|ref|YP_004471056.1| signal recognition particle protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112447|gb|AEF17384.1| signal recognition particle protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 446
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/399 (49%), Positives = 280/399 (70%), Gaps = 2/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++++ ALLEADV+ VV+ F+ V+E+++G ++ + P Q ++KIV DEL LMG +
Sbjct: 32 MKEVKIALLEADVNFKVVKEFINTVTEKSLGQEVMESLTPAQHVIKIVNDELTALMGSKE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ F+ PTVI++ GLQG GKTT S KLANYL+ +GKS +LVA D+YRPAAI QL ++
Sbjct: 92 SKINFSDKPPTVIMMVGLQGSGKTTTSGKLANYLRSKGKSPVLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G + VPV++ G + P IAK ++ A+ N +VVI+DTAGRL +D+ +MDELK++K
Sbjct: 152 GSSINVPVFSMGDKTSPVDIAKASIDFARNNNYNVVIIDTAGRLHVDEELMDELKNIKDA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+LLVVDAMTGQ+ + +FN ++ I G ILTKLDGD+RGGAALSVK V+ KPIK
Sbjct: 212 VNPDEILLVVDAMTGQDVVNVAESFNEKLDIDGVILTKLDGDTRGGAALSVKAVTRKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+ GE+ D+E F+PDRMA RILGMGDVLS +EKAQ + ++ A E+QKKI+ F F+
Sbjct: 272 FIASGEKFTDIEVFHPDRMASRILGMGDVLSLIEKAQAQIDEKKALELQKKILEQQFSFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + MG + ++ MIPG+ V ++K +K +EA+I++MT EER+ P +
Sbjct: 332 DFLDQLQGLKNMGPIDQLFSMIPGVNMSKLKGVNISDKDIKRIEAIIQSMTKEERQNPSI 391
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S R+KR+A SG + QQV+ L+ Q Q + MK
Sbjct: 392 INGS--RKKRIAAGSGTSIQQVNSLLKQFEQTKKMMKQF 428
>gi|334340367|ref|YP_004545347.1| signal recognition particle protein [Desulfotomaculum ruminis DSM
2154]
gi|334091721|gb|AEG60061.1| signal recognition particle protein [Desulfotomaculum ruminis DSM
2154]
Length = 451
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/405 (50%), Positives = 290/405 (71%), Gaps = 7/405 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ FV V E+A+G ++ + P QQ++KIV++EL +L+GG
Sbjct: 31 MREVKMALLEADVNFKVVKEFVAQVKERAIGQDVLESLSPAQQVIKIVKEELTELLGGTQ 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ A PT+I+L GLQG GKTT + KLA L KQG+ +LVA D+YRPAAI QL +L
Sbjct: 91 SKINIASKPPTIIMLVGLQGAGKTTTAGKLAKLLSKQGRRPLLVAADIYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ +PV+T G E P +IA+ +E+A D+VI+DTAGRL I++ +MDEL ++K
Sbjct: 151 GEQLKMPVFTLGQE-NPVKIAQAAVEDANSTGRDLVIIDTAGRLHINEELMDELANIKGT 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQEA + +FN ++G+ G I+TKLDGD+RGGAALSV++V+G PIK
Sbjct: 210 VKPHEILLVVDAMTGQEAVNVADSFNQKLGLDGIIMTKLDGDARGGAALSVRKVTGCPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++ LEPF+PDRMA RILGMGD+L+ +EKAQ E A ++ +KI A+F+
Sbjct: 270 FAGMGEKLDALEPFHPDRMADRILGMGDMLTLIEKAQANFDAEQAAKLNQKIRKADFNLE 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTPEEREK 357
DFL Q + V ++G + +V+GMIPGMGK+T Q+++ EK L +EA+I +MTP ER+
Sbjct: 330 DFLDQMQQVKKLGPLEQVLGMIPGMGKLT-KQLKDQQIDEKELGQVEAIIHSMTPWERQH 388
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
PE + S R+KR+A+ SG Q ++QL+ Q Q + MK L G+
Sbjct: 389 PERIDGS--RKKRIARGSGNRVQDINQLLKQFEQTKKMMKQLSGL 431
>gi|323344206|ref|ZP_08084432.1| signal recognition particle protein [Prevotella oralis ATCC 33269]
gi|323094935|gb|EFZ37510.1| signal recognition particle protein [Prevotella oralis ATCC 33269]
Length = 449
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/420 (50%), Positives = 287/420 (68%), Gaps = 13/420 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKNFTDTVKKKALGMNVLTAVKPSQLMVKIVHDELAELMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+EL + RP ++L++GLQG GKTT S KLAN LK KQ ++ +LVA DVYRPAAIDQL +
Sbjct: 91 AELKLS-GRPAIVLMSGLQGSGKTTFSGKLANMLKSKQKRNPLLVACDVYRPAAIDQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGVPVY+ +IA ++EAK K DVVIVDTAGRL ID+ MM E+ ++K
Sbjct: 150 VGEQVGVPVYSEPDSKNVIEIATHAVKEAKAKGNDVVIVDTAGRLAIDEEMMTEISELKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
LNP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 ALNPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A ++QKKI FDF
Sbjct: 270 KFVGTGEKMEAIDVFHPSRMADRILGMGDIVSLVERAQEQFDEEEARKLQKKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + GMIPG+GK + + + K +EA+I +MTP+ER PE
Sbjct: 330 NDFLNQIEQIKKMGNLKDLAGMIPGVGKAI-KDIDIDDDAFKGVEAIIRSMTPKERSNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGSLPAL 411
+L S RR+R+A+ SG Q+V++L+ Q Q R MK +M M+G +P +
Sbjct: 389 MLNTS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTGNQMAGMMSRMKGMKMPGM 446
>gi|385260553|ref|ZP_10038697.1| signal recognition particle protein [Streptococcus sp. SK140]
gi|385191103|gb|EIF38527.1| signal recognition particle protein [Streptococcus sp. SK140]
Length = 521
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/407 (49%), Positives = 288/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL +++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVNEELTEVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEDARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRMA RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMASRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ EK + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDEKQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--TPSRRRRIAAGSGNTFIEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|377831263|ref|ZP_09814244.1| sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus mucosae LM1]
gi|377554941|gb|EHT16639.1| sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus mucosae LM1]
Length = 483
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/409 (50%), Positives = 283/409 (69%), Gaps = 6/409 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A G +++G+ P QQ+VKIV +EL KLMG E
Sbjct: 32 MREIRLALLEADVNFAVVKDFVKTVREKAAGAEVLKGLNPAQQIVKIVNEELTKLMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++ GLQG GKTT + KLA LK + + M +A DVYRPAAI QL
Sbjct: 92 VPLNKAPHIPTVIMMVGLQGAGKTTTAGKLALRLKNEENARPMFIAADVYRPAAITQLQQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ +Q+GVPV+ GTE P I + G+E+AK+ + D VI+DTAGRLQID+ +MDEL ++K
Sbjct: 152 VADQIGVPVFEEGTEKDPVDIVRDGMEQAKQNHNDYVIIDTAGRLQIDEQLMDELVNIKN 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ A FN ++ ITG +LTKLDGD+RGGAA+S++ V+GKPI
Sbjct: 212 LTQPNEILLVVDAMTGQNAVKTAQGFNDKLDITGVVLTKLDGDTRGGAAMSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E K+ + FD+
Sbjct: 272 KFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEKAQETMDKMRANEFDY 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL+Q V +MG + ++ M+PGM PA + K ++A+I +MTPEERE
Sbjct: 332 NDFLEQMDQVTKMGPLENILKMMPGMAN-NPALKNINIDPKQFAHIKAIILSMTPEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
P+L+ +P RR+R+A SG+ +V++++ Q QMR MK + GG
Sbjct: 391 PDLM--NPSRRRRLAAGSGRPIVEVNRMIKQFNQMRKMMKQVTNGNFGG 437
>gi|335429766|ref|ZP_08556664.1| signal recognition particle protein [Haloplasma contractile
SSD-17B]
gi|334889776|gb|EGM28061.1| signal recognition particle protein [Haloplasma contractile
SSD-17B]
Length = 472
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/390 (49%), Positives = 284/390 (72%), Gaps = 4/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R +LLEADV+ VV++F V E+A+G +++ + P QQ+VKIV +EL +LMG +
Sbjct: 32 MREVRLSLLEADVNYKVVKQFTNEVKEKALGEKVLKSLSPGQQVVKIVHEELKQLMGEDA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ F TVI+L GLQG GKTT + KLANY+ KK K ++VA D+YRPAAIDQL
Sbjct: 92 HGVAFKGHGTTVIMLVGLQGAGKTTHAGKLANYMRKKHNKKPLMVAADIYRPAAIDQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV++ GT+V P +IAK+ L++A + D+VI+DTAGRL ID+A+MDEL+ VK
Sbjct: 152 VGKQLNVPVFSMGTDVSPVEIAKKALQQATENKNDLVIIDTAGRLHIDEALMDELQQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ+A + +F+ ++ +TGAILTKLDGD+RGGAALS+++V+G PI
Sbjct: 212 IAKPDEILLTVDAMTGQDAVTVADSFHKQLNVTGAILTKLDGDTRGGAALSIRKVTGVPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ+ + +E+A +M KK A FD+
Sbjct: 272 KFMGLGEQLDKIEVFHPERMASRILGMGDVLTLIEKAQDAIDEEEAMDMAKKFKEATFDY 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF KQ + + R+G++ ++ MIPGMGK V +K +EA+I +MT EER P
Sbjct: 332 NDFKKQIKQIKRLGNLKGIMKMIPGMGK-QLNNVDIDDKQFNYIEAIINSMTKEERRNPN 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
L++ S RR+R+A+ +G+ +V++++ Q
Sbjct: 391 LMSSS--RRRRIAEGAGRNISEVNRIIKQF 418
>gi|414154258|ref|ZP_11410577.1| Signal recognition particle protein [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411454049|emb|CCO08481.1| Signal recognition particle protein [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 446
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/409 (50%), Positives = 291/409 (71%), Gaps = 7/409 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ FV V E+AVG ++ + P QQ++KIV+DEL +L+GG
Sbjct: 31 MREVKMALLEADVNFKVVKEFVAQVKERAVGQDVLASLSPAQQVIKIVKDELTELLGGTQ 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+++ A PT+I+L GLQG GKTT + KLA L KQG+ +LVA D+YRPAAI QL +L
Sbjct: 91 AKINMAAKPPTIIMLVGLQGAGKTTTAGKLAKLLSKQGRRPLLVAADIYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ +PV++ G E P +IA+ +++A DVVI+DTAGRL I++ +M EL ++K
Sbjct: 151 GEQLQIPVFSLGQE-NPVKIAQAAVDQAGSTGKDVVIIDTAGRLHINEELMGELAEIKTA 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQEA + TFN ++G+ G I+TKLDGD+RGGAALSV++V+G PIK
Sbjct: 210 VKPHEILLVVDAMTGQEAVNVADTFNRKLGLDGIIMTKLDGDARGGAALSVRKVTGTPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ E A ++ KKI A+F+
Sbjct: 270 FAGMGEKLDALEPFHPDRMADRILGMGDVLTLIEKAQANFDAEQAAKLNKKIRQADFNLE 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMTPEEREK 357
DFL+Q + V ++G + +++GMIPGM K+T Q+++ + K L +EA+I +MTP ER+
Sbjct: 330 DFLEQLQQVKKLGPLEQILGMIPGMNKLT-KQLKDQQLDGKELAQVEAIIYSMTPWERQH 388
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
PE + S R+KR+A+ SG Q V+QL+ Q Q R MK L + +GG
Sbjct: 389 PEKIDGS--RKKRIARGSGTRVQDVNQLLKQFEQTRKMMKQLSNMTKGG 435
>gi|419784925|ref|ZP_14310683.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-M]
gi|383363526|gb|EID40858.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-M]
Length = 447
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/413 (47%), Positives = 298/413 (72%), Gaps = 4/413 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R AL EADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL KLMGGE
Sbjct: 32 MREVRLALFEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK G +G + A+
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKVNAI 442
>gi|322387559|ref|ZP_08061168.1| signal recognition particle protein [Streptococcus infantis ATCC
700779]
gi|419843114|ref|ZP_14366438.1| signal recognition particle protein [Streptococcus infantis ATCC
700779]
gi|321141426|gb|EFX36922.1| signal recognition particle protein [Streptococcus infantis ATCC
700779]
gi|385703216|gb|EIG40342.1| signal recognition particle protein [Streptococcus infantis ATCC
700779]
Length = 521
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ + E+AVG +I + P QQ++KIV +EL +++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKIRERAVGHEVIDTLNPAQQIIKIVNEELTEVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEDARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDELLMNELRDVKTL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVIDAMIGQEAANVAREFNAQLEVTGIILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRMA RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMASRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ EK + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDEKQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + M+ GVM G
Sbjct: 392 DLL--TPSRRRRIAAGSGNTFIDVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|365904203|ref|ZP_09441962.1| signal recognition particle protein [Lactobacillus versmoldensis
KCTC 3814]
Length = 479
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/409 (49%), Positives = 290/409 (70%), Gaps = 7/409 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ V E+A+G ++ + P QQ+VKIV DEL KLMG E
Sbjct: 32 MREVRMALLEADVNFDVVKSFIKQVRERALGAEVMESLTPSQQVVKIVDDELTKLMGTEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PT+I++ GLQG GKTT + KLA +L + K+ + +AGDVYRPAAI+QL
Sbjct: 92 VPLNKAPHIPTIIMMVGLQGAGKTTTAGKLAKHLMENDKARPLFIAGDVYRPAAIEQLKT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+ VPVY GT+ P +I K GL +A +K D VI+DTAGRL+ID+ +MDELK +K
Sbjct: 152 IGEQLDVPVYDEGTDQDPVEIVKSGLAQAHEKKNDYVIIDTAGRLEIDEKLMDELKRIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+L V D+MTGQ AA + F+ ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAQPNEILFVADSMTGQVAAKVAAGFDEQLDITGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+++ L+ F+PDRMA RILGMGD+L+ +EKAQ+ Q+ A++M +KI +FDF
Sbjct: 272 KFIGQGEKLDQLDVFHPDRMANRILGMGDMLTLIEKAQQDYDQKQAQDMAQKIKENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q + +MG + ++ MIPGM P A V EK + ++A++ +MTP+ERE
Sbjct: 332 NDFIDQMDQIQKMGPLDEIMKMIPGMAN-NPALANVNIDEKDISHLKAIVYSMTPQERED 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVMEG 405
P+LL +P RR+R+A SG++ Q+V++++ Q Q + MK + G M+G
Sbjct: 391 PKLL--NPSRRRRIASGSGRSVQEVNRMIKQFKQSQDMMKQMSKGNMKG 437
>gi|196247664|ref|ZP_03146366.1| signal recognition particle protein [Geobacillus sp. G11MC16]
gi|196212448|gb|EDY07205.1| signal recognition particle protein [Geobacillus sp. G11MC16]
Length = 433
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/391 (50%), Positives = 288/391 (73%), Gaps = 4/391 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+AVG +++ + P QQ++K+V++EL LMGGE
Sbjct: 19 MREVRLALLEADVNFKVVKDFIKRVSERAVGQEVLKSLTPGQQVIKVVKEELTALMGGEQ 78
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTV+++ GLQG GKTT + KLAN L+K + +LVA DVYRPAAI QL
Sbjct: 79 SKIAVAKKPPTVVMMVGLQGAGKTTTTGKLANLLRKRHNRKPLLVAADVYRPAAIKQLET 138
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G P +IAKQ LE AK+++ D V++DTAGRL +D+A+MDELK ++
Sbjct: 139 LGKQLNMPVFSLGEHANPVEIAKQALERAKEEHHDYVLIDTAGRLHVDEALMDELKQMRE 198
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V+G PI
Sbjct: 199 AVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAVTGAPI 258
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +A F F
Sbjct: 259 KFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRTATFTF 318
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q V ++G + ++ M+PG KI ++ EK + +EA+I +MT EE+ P
Sbjct: 319 DDFLDQLGQVRKLGPLDEILKMLPGANKIKGLDNIQVDEKQIARVEAIIRSMTKEEKMHP 378
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
E++ S R+KR+A+ SG T Q+V++L+ Q
Sbjct: 379 EIINGS--RKKRIAKGSGTTVQEVNRLLKQF 407
>gi|359404602|ref|ZP_09197435.1| signal recognition particle protein [Prevotella stercorea DSM
18206]
gi|357560144|gb|EHJ41545.1| signal recognition particle protein [Prevotella stercorea DSM
18206]
Length = 450
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/402 (50%), Positives = 280/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKTFTDTVKKKALGMNVLTAVKPSQLMVKIVHDELAELMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+EL RP++IL++GLQG GKTT S KLAN LK KQ K+ +LVA DVYRPAAI+QL +
Sbjct: 91 AELNL-NGRPSIILMSGLQGSGKTTFSGKLANMLKNKQHKNPLLVACDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+GVPVY+ IA + EAK K+ DVVIVDTAGRL +D+ MM+E++ +K
Sbjct: 150 VGEQIGVPVYSEPESKDVVSIANNAIREAKAKSYDVVIVDTAGRLAVDEEMMNEIETLKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPNETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A +QKKI FDF
Sbjct: 270 KFVGTGEKMEAIDVFHPSRMADRILGMGDIVSLVERAQEQFDEEEARRLQKKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFLGQIEQIKKMGNLKDLAAMIPGVGKAIK-DVDIDDNAFKGIEAIIKSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L +S RR R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 389 ILNQS--RRMRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|258514481|ref|YP_003190703.1| signal recognition particle protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257778186|gb|ACV62080.1| signal recognition particle protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 449
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/416 (49%), Positives = 288/416 (69%), Gaps = 7/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VV+ FV V E+A+G ++ + P QQ++KIV EL+ LMGGE
Sbjct: 32 LREVRVALLEADVNFKVVKDFVNKVKEKAIGQDILSSLTPAQQVIKIVHQELMDLMGGEY 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ A PTVI++ GL G GKTT SAKLAN+L+KQG+ +LVAGD++RPAAI QL +L
Sbjct: 92 SKINLAPKPPTVIMMVGLHGAGKTTTSAKLANFLRKQGRRPLLVAGDIHRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ +PV+T G + P+ IA+ +E A D+VI+DTAGRL ID+ +MDEL+ VK
Sbjct: 152 GEQLDIPVFTMGDKQAPAVIARAAIENASNSGRDLVIIDTAGRLHIDEELMDELEAVKSE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + FN + + G I+TKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 VKPNEILLVVDAMTGQDAVNVAEVFNRRMQLNGVIMTKLDGDTRGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++ LE F+PDRMA RILGMGDVL+ +EKAQ E E+ KKI S F +
Sbjct: 272 FAGIGEKLDALETFHPDRMADRILGMGDVLTLIEKAQANFDAEKVAELNKKIRSMEFTLD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q + V ++G + +V+ M PGMG + + E EK L +EA+I++MT +EREKPE
Sbjct: 332 DFLEQLQQVKKLGPLEQVLSMFPGMGGLKKIKNLEFDEKELVYVEAIIKSMTHKEREKPE 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG----VMEGGSLPAL 411
++ S R+R+A+ SG + Q+V++L+ Q Q + MK + +GG +P +
Sbjct: 392 IINGSC--RRRIAKGSGTSVQEVNRLLKQFEQTKKMMKQFSDIDKTIKKGGKMPKI 445
>gi|379795602|ref|YP_005325600.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MSHR1132]
gi|356872592|emb|CCE58931.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MSHR1132]
Length = 455
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL KLMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK +++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALQHAKDEHLDFVIIDTAGRLHIDEALMNELKEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDNQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|333979545|ref|YP_004517490.1| signal recognition particle protein [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333823026|gb|AEG15689.1| signal recognition particle protein [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 456
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/403 (50%), Positives = 285/403 (70%), Gaps = 8/403 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M+++RRALL ADV+ VV+ FV V E+AVG ++ + P QQ++KIVRDEL LMGG
Sbjct: 32 MKEVRRALLAADVNFQVVKSFVARVKERAVGQDVLSSLTPAQQVIKIVRDELAGLMGGTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L A PT++++ GL G GKTT +AKLAN ++KQG+ MLVAGDVYRPAAI QL +L
Sbjct: 92 SKLNLAPKPPTIVMMVGLHGAGKTTTAAKLANLMRKQGRRPMLVAGDVYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+G+PV++ G P IA+ +E A K+ D+VI+DTAGRL+I++ MM EL+ +K
Sbjct: 152 GEQLGIPVFSMGDRHTPVDIARAAVEHAVKQGRDLVIIDTAGRLEINEEMMAELETLKAA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ A + TFN +G+ G +LTKLDGD+RGGAALS+K V+G PIK
Sbjct: 212 VRPHEILLVVDAMTGQVAVNIAETFNKRLGLDGVVLTKLDGDTRGGAALSIKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ E + KKI SA+F +
Sbjct: 272 FVGVGEKLDALEPFHPDRMADRILGMGDVLTLIEKAQANFDAEQVARLNKKIRSADFTLD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA----EKSLKIMEAMIEAMTPEERE 356
DFL+Q + V ++G + ++I MIPG+G + +++E ++ L +EA+I++MTP ER
Sbjct: 332 DFLEQLQEVKKLGPIQQIISMIPGLGNMK--KLKELGDIDDRELVYVEAIIKSMTPWERA 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
P + S RR+R+A+ SG T Q+V+ ++ Q Q R M+ L
Sbjct: 390 HPHEINGS--RRRRIARGSGTTVQKVNSVLKQFEQTRKMMRQL 430
>gi|163847609|ref|YP_001635653.1| signal recognition particle protein [Chloroflexus aurantiacus
J-10-fl]
gi|222525465|ref|YP_002569936.1| signal recognition particle protein [Chloroflexus sp. Y-400-fl]
gi|163668898|gb|ABY35264.1| signal recognition particle protein [Chloroflexus aurantiacus
J-10-fl]
gi|222449344|gb|ACM53610.1| signal recognition particle protein [Chloroflexus sp. Y-400-fl]
Length = 450
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 287/401 (71%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M+ +R ALLEADV+ VV+ FV V+EQA+G + + + P QQ++KIV EL+ L+G E
Sbjct: 31 MKQVRLALLEADVNFRVVKEFVAKVTEQAIGEEVTKSLTPHQQVIKIVHQELINLLGTEN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A+ PTVI+L GLQG GKTT++AKLA +L+K+GK +LVA DVYRPAAI QL L
Sbjct: 91 VPLQEARPGPTVIMLVGLQGTGKTTLAAKLALHLRKKGKRVLLVAADVYRPAAITQLQAL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ +PVY+ GT+ P IA+ LE A+K+ +VVI+DTAGRLQID+ +M EL+ ++
Sbjct: 151 GRQLNIPVYSEGTQASPPDIAEHALEHARKELFNVVIIDTAGRLQIDEPLMQELEQIENR 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P E LLVVDAMTGQEA + TFN + +TG ++TK+DGD+RGGAALSV+ V+G PIK
Sbjct: 211 VHPIERLLVVDAMTGQEAVRVAETFNQRVKLTGVVMTKMDGDARGGAALSVRAVTGVPIK 270
Query: 241 LVGRGERME--DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 298
+ GE+++ LE F+PDR+A RILGMGDVLS +E+A+++ E A++MQK++ FD
Sbjct: 271 FLSTGEKVDGNTLEVFHPDRLASRILGMGDVLSLIERAEQLYDAEQAKKMQKRLSKGEFD 330
Query: 299 FNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
F DFL + ++G + ++I MIPG+ ++ + E+ +K +EA+I +MTPEER +P
Sbjct: 331 FEDFLNSLHQMRKLGPLQQIIAMIPGLNQLARNEELLDERHVKRVEAIIYSMTPEERRRP 390
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E++ S RR+R+A+ SG + Q+VSQLV Q QM+ MK L
Sbjct: 391 EIIKGS--RRERIARGSGTSVQEVSQLVKQFQQMQRMMKQL 429
>gi|421860554|ref|ZP_16292660.1| GTPase [Paenibacillus popilliae ATCC 14706]
gi|410829740|dbj|GAC43097.1| GTPase [Paenibacillus popilliae ATCC 14706]
Length = 457
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/404 (49%), Positives = 286/404 (70%), Gaps = 3/404 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F+ V E+AVG +++ P +V IV EL +LMGG
Sbjct: 32 MREVRLALLEADVNFKVVKEFINKVKEKAVGQEVMKSFTPGMVIVDIVNKELTELMGGTA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L A PTVI++AGLQG GKTT S KLA L+KQ +LVA D+YRPAAI QL +L
Sbjct: 92 AKLAKANKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNHKPLLVAADIYRPAAIKQLEVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV++ G +V P +IA+Q +E A+ ++D VIVDTAGRL ID+A+M+ELK +
Sbjct: 152 GAQINVPVFSLGDQVSPVEIARQAMEHARVNHLDYVIVDTAGRLHIDEALMEELKQIHET 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 VNPDEVLLVVDAMTGQDAVNVAESFNQQLALTGVVLTKLDGDTRGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + + A+EM+ K+ +A F F+
Sbjct: 272 FAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQANIDADKAKEMEMKMRNAAFTFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q + V ++G + +++ MIPGM K+ A ++ E+ + +EA++ +MT +ER+ P+
Sbjct: 332 DFLEQMQQVKQLGPIDQILDMIPGMNKMKQTANLKVDERQMGRIEAIVRSMTNKERQDPD 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 403
++ S RRKR+A SG + V++L+ Q +MR MK +M
Sbjct: 392 MINHS--RRKRIAAGSGTSLADVNRLIKQFDEMRRMMKQFTEMM 433
>gi|322391775|ref|ZP_08065240.1| signal recognition particle protein [Streptococcus peroris ATCC
700780]
gi|321145255|gb|EFX40651.1| signal recognition particle protein [Streptococcus peroris ATCC
700780]
Length = 521
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/407 (49%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAIGHEVIDTLNPAQQIIKIVNEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEDARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRMA RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMASRILGMGDMLTLIEKASQEYDEQKAFEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ EK + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDEKQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + M+ GVM G
Sbjct: 392 DLL--TPSRRRRIAAGSGNTFIDVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|386830772|ref|YP_006237426.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|417797950|ref|ZP_12445136.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21310]
gi|334277072|gb|EGL95311.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21310]
gi|385196164|emb|CCG15785.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus HO 5096 0412]
Length = 455
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL KLMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 SSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|375008167|ref|YP_004981800.1| Signal recognition particle [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359287016|gb|AEV18700.1| Signal recognition particle [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 446
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/391 (50%), Positives = 287/391 (73%), Gaps = 4/391 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+AVG +++ + P QQ++K+V++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFIKRVSERAVGQEVMKSLTPGQQVIKVVKEELTALMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTV+++ GLQG GKTT + KLAN L+K + +LVA DVYRPAAI QL
Sbjct: 92 SKIAVAKKPPTVVMMVGLQGAGKTTTTGKLANLLRKRHNRKPLLVAADVYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV++ G + P +IAKQ LE AK+++ D V++DTAGRL ID+A+MDELK +K
Sbjct: 152 LGKQLNVPVFSLGEDANPVEIAKQALERAKEEHYDYVLIDTAGRLHIDEALMDELKQMKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V+G PI
Sbjct: 212 AVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +A F
Sbjct: 272 KFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRTATFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q V ++G + ++ M+PG KI + ++ EK + +EA+I +MT EE+ P
Sbjct: 332 DDFLDQLGQVRKLGPLDEILKMLPGANKIKGLSNIQVDEKQIARVEAIIRSMTKEEKMHP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
E++ S R++R+A+ SG T Q V++L+ Q
Sbjct: 392 EIINAS--RKRRIAKGSGTTVQDVNRLLKQF 420
>gi|167769126|ref|ZP_02441179.1| hypothetical protein ANACOL_00449 [Anaerotruncus colihominis DSM
17241]
gi|167668766|gb|EDS12896.1| signal recognition particle protein [Anaerotruncus colihominis DSM
17241]
Length = 459
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/394 (51%), Positives = 284/394 (72%), Gaps = 4/394 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ V + FV AV+E+AVG ++ + P Q +VKIV DEL LMG
Sbjct: 32 MREVRLALLEADVNYKVAKDFVAAVTEKAVGDEVLESLTPAQMVVKIVNDELTNLMGETG 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L F+ PT++++ GLQG GKTT SAKLA + ++QGK +LVA DVYRPAAI+QL ++
Sbjct: 92 ARLNFSSRPPTIVMMCGLQGSGKTTHSAKLALHFREQGKRPLLVACDVYRPAAIEQLKVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE+ GVPV+ G + P +IA++ + AK D+VI+DTAGRL ID+A+MDELK ++
Sbjct: 152 GEKAGVPVFDMG-QGDPVEIARRAVMHAKDHGNDLVILDTAGRLHIDEALMDELKRIRDE 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P E+LLVVDAM GQ+A + + F+ +GI+G ILTKLDGD+RGGAALSV+ V+GKP+K
Sbjct: 211 VSPQEILLVVDAMVGQDAVNVASAFDEALGISGVILTKLDGDTRGGAALSVRAVTGKPVK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++ DLEPFYPDRMA RILGMGDVL+ +EKAQ + A EM +K+ F+FN
Sbjct: 271 FVGTGEKLGDLEPFYPDRMASRILGMGDVLTLIEKAQSDFDAKQAAEMAQKMRQNTFNFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
D L Q + + +MG +S VI M+PG+ GK+ Q + E+ L+ EA+I++MTP EREKP
Sbjct: 331 DMLAQMQQLKKMGPLSSVINMLPGVAGKLDDEQAEQGERELRRTEAIIQSMTPAEREKPS 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
L+ +P R++R+A SG + V++L+ Q QM+
Sbjct: 391 LI--NPARKRRIAAGSGTRVEDVNRLLRQNEQMQ 422
>gi|423720622|ref|ZP_17694804.1| signal recognition particle protein [Geobacillus thermoglucosidans
TNO-09.020]
gi|383365975|gb|EID43266.1| signal recognition particle protein [Geobacillus thermoglucosidans
TNO-09.020]
Length = 446
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/391 (50%), Positives = 291/391 (74%), Gaps = 4/391 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVSERAVGQEVLKSLTPGQQVIKVVKEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L+K+ ++ MLVA D+YRPAAI QL
Sbjct: 92 SKIAVASRPPTVIMMVGLQGAGKTTTTGKLANLLRKRYNRNPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D V++DTAGRL ID+ +MDELK +K
Sbjct: 152 LGKQLNMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVLIDTAGRLHIDETLMDELKQMKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 IAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +A F
Sbjct: 272 KFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRTATFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V ++G + ++ MIPG KI ++ EK + +EA+I +MT EE+ P
Sbjct: 332 DDFLEQLGQVRKLGPLDEILKMIPGFHKIKGLNNLQIEEKQISRVEAIIRSMTKEEKMHP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
E++ S R+KR+A+ SG + Q+V++L+ Q
Sbjct: 392 EIINGS--RKKRIAKGSGTSVQEVNRLLKQF 420
>gi|423074815|ref|ZP_17063539.1| signal recognition particle protein [Desulfitobacterium hafniense
DP7]
gi|361854318|gb|EHL06402.1| signal recognition particle protein [Desulfitobacterium hafniense
DP7]
Length = 453
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/399 (51%), Positives = 286/399 (71%), Gaps = 4/399 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+++G ++ + P QQ++KIV +E+V LMGG
Sbjct: 31 MREVRMALLEADVNFKVVKDFVAKVKERSIGQEVLESLSPGQQVIKIVNEEMVALMGGVS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ + PTVI+L GLQG GKTT AKLAN LKKQGK +LVA D+YRPAAI QL +L
Sbjct: 91 SKINISSKPPTVIMLVGLQGAGKTTHGAKLANMLKKQGKHPLLVACDIYRPAAIKQLEVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV++ G E P +IA L+ A + +DVVI+DTAGRL I++ +M EL+++K
Sbjct: 151 GEQIKVPVFSLGQE-NPVKIAAASLQHANSQGLDVVIIDTAGRLHINEELMGELREIKVS 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGGAALSVK V+G PIK
Sbjct: 210 VKPHEILLVVDAMTGQDAVNVAESFHNELGVDGIILTKLDGDTRGGAALSVKAVTGCPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+M+ +EPF+P+RMA RILGMGDVL+ +EKAQE ++ A EM++K+ F +
Sbjct: 270 FAGVGEKMDAIEPFFPERMASRILGMGDVLTLIEKAQEAFDEKQAREMEQKLRKQEFTLD 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG ++ ++ MIPG+GK V+ EK + +EA+I +MT EER KP L
Sbjct: 330 DFLDQMQQLKKMGPLNSLLEMIPGVGK-QMKDVQVDEKDMAHVEAIIHSMTAEERRKPAL 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ +S R++R+A+ SG + Q+V +L+ Q QM+ MK
Sbjct: 389 IKDS--RKRRIAKGSGTSIQEVGRLLKQFEQMQKMMKQF 425
>gi|220928159|ref|YP_002505068.1| signal recognition particle protein [Clostridium cellulolyticum
H10]
gi|219998487|gb|ACL75088.1| signal recognition particle protein [Clostridium cellulolyticum
H10]
Length = 448
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/391 (51%), Positives = 279/391 (71%), Gaps = 2/391 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+I+ ALLEADV+ VV+ F+ +SE+AVG ++ + P QQ+VKIV +EL++L+G E
Sbjct: 33 MREIKLALLEADVNFKVVKEFISKISERAVGADVLESLTPGQQVVKIVHEELIELLGREQ 92
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ FA PTV ++AGLQG GKTT + KLAN L+KQGK+ +LVA DVYRPAAI QL +L
Sbjct: 93 SKVTFAPKPPTVFMMAGLQGAGKTTTAGKLANLLRKQGKNPLLVACDVYRPAAIKQLQVL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ +PV+T P QIAK+ ++ A+ K D+VI+DTAGRL ID+ +MDEL ++K
Sbjct: 153 GNQLNIPVFTLENNQNPVQIAKEAVKFAEMKQNDLVILDTAGRLHIDEKLMDELLNIKNT 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + TFN ++GI G +LTKLDGD+RGGAALSVK V+GKPIK
Sbjct: 213 VKPHEILLVVDSMTGQDAVNVSKTFNEKLGIDGVVLTKLDGDTRGGAALSVKSVTGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE++ D+EPF+PDRMA RILGMGDVLS +EKAQE ++ A E++KK+ + F
Sbjct: 273 FAAMGEKLNDIEPFFPDRMASRILGMGDVLSLIEKAQEAYDEKKAIELEKKMRTMTFTLE 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG + ++GM+PG+ + EK + EA+I++MT +ER P +
Sbjct: 333 DFLDQMQQIKKMGPIGDLLGMMPGVDSKALKDIDIDEKQMGRTEAIIQSMTRKERLDPSI 392
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 391
+ S RRKR++ SG T Q+V+ L+ Q Q
Sbjct: 393 INGS--RRKRISAGSGTTIQEVNALLKQFEQ 421
>gi|417903373|ref|ZP_12547220.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21269]
gi|341849994|gb|EGS91127.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21269]
Length = 455
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL KLMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|418655398|ref|ZP_13217261.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-105]
gi|375037268|gb|EHS30313.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-105]
Length = 455
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL KLMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 SSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNIS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|228928893|ref|ZP_04091925.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228830700|gb|EEM76305.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 449
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/406 (49%), Positives = 294/406 (72%), Gaps = 8/406 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVSERAVGQDVMKSLTPGQQVIKVVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAIANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDELAKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKLERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 390 QPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|410460649|ref|ZP_11314323.1| signal recognition particle protein [Bacillus azotoformans LMG
9581]
gi|409926703|gb|EKN63857.1| signal recognition particle protein [Bacillus azotoformans LMG
9581]
Length = 447
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 295/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ V E+AVG +++ + P QQ++K+V++EL +LMGG
Sbjct: 32 MREVRLALLEADVNFKVVKDFIKRVKERAVGQEVMKSLTPGQQVIKVVQEELTELMGGSQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ + PTV+++ GLQG GKTT + KL+N L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIAVSNRPPTVVMMVGLQGAGKTTTTGKLSNLLRKKYNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+ + D V++DTAGRL ID+ +MDELK +K
Sbjct: 152 LGKQLNIPVFSLGDQVSPVEIAKQAVEKAKEDHHDYVLIDTAGRLHIDETLMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+ LVVDAMTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 LAKPDEIFLVVDAMTGQDAVNVAESFNEQLGLTGTILTKLDGDTRGGAALSIKAVTNIPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + QE A+E+++K+ + +F F
Sbjct: 272 KFVGMGEKLDQLEDFHPERMASRILGMGDVLTLIEKAQANVDQEKAKELEEKMRTMSFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +MG + +IGM+PG KI + ++ EK +K +EA+I++MT +E+ P
Sbjct: 332 DDFLEQLAQVRKMGPLDDLIGMLPGANKIKGLKDLKVDEKQIKHVEAIIQSMTKKEKVNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E++ S R+KR+A+ SG+T Q+V++L+ Q M+ K +
Sbjct: 392 EIINAS--RKKRIAKGSGRTVQEVNRLLKQFEDMKKMFKQM 430
>gi|312111704|ref|YP_003990020.1| signal recognition particle protein [Geobacillus sp. Y4.1MC1]
gi|336236079|ref|YP_004588695.1| signal recognition particle protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311216805|gb|ADP75409.1| signal recognition particle protein [Geobacillus sp. Y4.1MC1]
gi|335362934|gb|AEH48614.1| signal recognition particle protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 446
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/391 (50%), Positives = 291/391 (74%), Gaps = 4/391 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVSERAVGQEVLKSLTPGQQVIKVVKEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L+K+ ++ MLVA D+YRPAAI QL
Sbjct: 92 SKIAVASRPPTVIMMVGLQGAGKTTTTGKLANLLRKRYNRNPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D V++DTAGRL ID+ +MDELK +K
Sbjct: 152 LGKQLNMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVLIDTAGRLHIDETLMDELKQMKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 IAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +A F
Sbjct: 272 KFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRTATFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V ++G + ++ MIPG KI ++ EK + +EA+I +MT EE+ P
Sbjct: 332 DDFLEQLGQVRKLGPLDEILKMIPGFHKIKGLNNLQIDEKQISRVEAIIRSMTKEEKMHP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
E++ S R+KR+A+ SG + Q+V++L+ Q
Sbjct: 392 EIINGS--RKKRIAKGSGTSVQEVNRLLKQF 420
>gi|435853372|ref|YP_007314691.1| signal recognition particle protein [Halobacteroides halobius DSM
5150]
gi|433669783|gb|AGB40598.1| signal recognition particle protein [Halobacteroides halobius DSM
5150]
Length = 447
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/416 (49%), Positives = 285/416 (68%), Gaps = 5/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ ALLEADV+ VV+ F+ + E+AVG ++ + P QQ++KIV +EL LMGG
Sbjct: 32 LREVKLALLEADVNYKVVKGFISKIEERAVGHEVLDSLTPAQQVIKIVNEELTDLMGGTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ FA + PTVI++AGLQG GKTT KLA LK QGK+ +LVAGD+YRPAAI QL +L
Sbjct: 92 SKISFASNPPTVIMMAGLQGAGKTTTVGKLAKQLKNQGKNPLLVAGDIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+++ PV++ G + P IAK + A+ DVVI+DTAGRL ID+ +MDELK +K
Sbjct: 152 GDRLDQPVFSMGDKQSPVDIAKAAINNAESNGHDVVIIDTAGRLHIDEELMDELKQIKSE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + F+ +G+ G +LTKLDGD+RGGAALS+ V+GKPIK
Sbjct: 212 VIPHEILLVVDAMTGQDAVNVAEEFDDALGVDGVVLTKLDGDARGGAALSISSVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++++LEPF+PDRM+ RILGMGDVLS +EKA+E M +E A+E+++K+ F
Sbjct: 272 FVGTGEKLDNLEPFHPDRMSSRILGMGDVLSLIEKAEEQMDEERAKELEQKLREKKFTLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q V MG + ++GMIPG GK + EK L +EA+I +MT EER PE+
Sbjct: 332 DFLDQLEQVRNMGPLDEILGMIPGAGK-QLKNLNMDEKQLDYIEAIINSMTIEERRNPEI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG--GSLPALSNL 414
+ S RR+R+A SG + QQV++L+ Q Q + M L +G G L NL
Sbjct: 391 INGS--RRRRIAAGSGTSVQQVNRLLKQFKQTKKMMDQLGDAQKGMAGKLKGKMNL 444
>gi|126654295|ref|ZP_01726072.1| signal recognition particle-like (SRP) component [Bacillus sp.
B14905]
gi|126589259|gb|EAZ83420.1| signal recognition particle-like (SRP) component [Bacillus sp.
B14905]
Length = 438
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/407 (51%), Positives = 299/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R AL+EADV+L VV+ FV+ VSE+AVGV +++ + P QQ++KIV+DEL +LMGGE
Sbjct: 32 MREVRFALIEADVNLKVVKEFVKKVSERAVGVDVMQSLTPGQQVIKIVQDELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S + F PTVI++ GLQG GKTT S KLAN L KK + +LVA DVYRPAA+ QL
Sbjct: 92 SPIKFNTKPPTVIMMVGLQGAGKTTTSGKLANVLRKKYNRKPLLVAADVYRPAAVQQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ GT++ P +IA+Q +E+AK+++ DVVI+DTAGRL ID+ +M ELKD++
Sbjct: 152 LGKQLSLPVFSLGTDISPVEIARQAIEKAKEEHHDVVIIDTAGRLHIDEDLMQELKDIRA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P EV LVVDAMTGQ+A + +FN IGITG +LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 LKEPDEVFLVVDAMTGQDAVNVAESFNEAIGITGVVLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ LEPF+P+RMA RILGMGDVLS +EKAQ + + A+E+++K + F
Sbjct: 272 KFVGMGEKMDALEPFHPERMASRILGMGDVLSLIEKAQANVDEAKAKELEEKFKTQTFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DF++Q + V +MG + ++ M+PG KI V+ +K + +EA+I +MTP E+ P
Sbjct: 332 DDFVEQLQQVKKMGPIDEILKMLPGANKIKGLDNVKVDDKQMGRVEAIIYSMTPAEKTNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
EL+ S R+KR+++ SG + Q+V++L+ Q +M+ MK + G+ G
Sbjct: 392 ELINGS--RKKRISKGSGTSIQEVNRLIKQFDEMKKMMKQMTGMASG 436
>gi|336436408|ref|ZP_08616120.1| signal recognition particle protein [Lachnospiraceae bacterium
1_4_56FAA]
gi|336007273|gb|EGN37298.1| signal recognition particle protein [Lachnospiraceae bacterium
1_4_56FAA]
Length = 449
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/406 (50%), Positives = 287/406 (70%), Gaps = 5/406 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++ ALLEADV+ VV+ F++ V E+AVG ++ G+ P Q ++KIV +ELV LMG E
Sbjct: 32 LKEVKMALLEADVNFKVVKNFIKDVQERAVGQDVMNGLNPGQMVIKIVNEELVALMGSET 91
Query: 61 SELVFAK-SRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ S TVI++AGLQG GKTT +AKLA K +GK +LVA DVYRPAAI QL I
Sbjct: 92 TEITLQPGSATTVIMMAGLQGAGKTTTTAKLAGKFKLKGKKPLLVACDVYRPAAIKQLQI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
GE+ GV V++ G + KP+ IAK +E A K + ++VI+DTAGRL ID+ MM EL+++K
Sbjct: 152 NGEKQGVEVFSMGDKAKPADIAKAAMEHAAKNHNNLVILDTAGRLHIDEDMMAELQEIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+N + +LVVDAMTGQ+A + ++FN +IGI G I+TKLDGD+RGGAALS+K V+G PI
Sbjct: 212 AVNVHQTILVVDAMTGQDAVNVASSFNEKIGIDGVIVTKLDGDTRGGAALSIKAVTGCPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
VG GE++ DLE FYPDRMA RILGMGDVL+ +EKA + +E A +M +K+ A FDF
Sbjct: 272 LYVGMGEKLSDLEQFYPDRMASRILGMGDVLTLIEKAGAELDEEKARQMTQKLKKAQFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREK 357
D+L+ + +MG +S ++GM+PG+G K+ E EK + MEAMI +MTPEER
Sbjct: 332 EDYLESMSQMKKMGGLSSIMGMMPGIGGKKMPDLDSEENEKKMAQMEAMIYSMTPEERRN 391
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 403
P+LL +P R+ R+A+ +G +V+++V Q +MR MK L G+M
Sbjct: 392 PDLL--NPSRKHRIAKGAGVDIAEVNRMVKQFNEMRKMMKKLPGLM 435
>gi|193216162|ref|YP_001997361.1| signal recognition particle protein [Chloroherpeton thalassium ATCC
35110]
gi|193089639|gb|ACF14914.1| signal recognition particle protein [Chloroherpeton thalassium ATCC
35110]
Length = 449
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/407 (50%), Positives = 291/407 (71%), Gaps = 5/407 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDI+RALL+ADV+ V + FV+ V +QA+G +I+ V P Q +VKIV DELVK MGGE
Sbjct: 31 MRDIKRALLDADVNYKVTKNFVEQVRKQALGEEVIKSVSPAQMIVKIVHDELVKAMGGEQ 90
Query: 61 SELVFAKSR-PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
++ SR P VI++AGLQG GKTT +AKLAN LKK+G++ +L+A DVYRPAAI+QL
Sbjct: 91 KDINLKTSRMPAVIMVAGLQGSGKTTFTAKLANLLKKKGRAPLLIAADVYRPAAIEQLKT 150
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG Q+GVPV++ E + AKQG+E AK+ + +V IVDTAGRLQID+ MM E + +KR
Sbjct: 151 LGAQIGVPVFSI-EEKDALKAAKQGIEFAKQNSKNVAIVDTAGRLQIDEEMMAEAERLKR 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
L+P E+L VVD+M GQEA FN + G +LTK+DGD+RGGAALS+K V KPI
Sbjct: 210 ELSPEEILFVVDSMIGQEAVNTAKVFNDRLDFDGVVLTKMDGDTRGGAALSIKTVVDKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + +GE+++DL+ FYP+RMA RILGMGD++SFVEKAQE + E +++QK+++ F+
Sbjct: 270 KFLSQGEKVDDLDIFYPERMAQRILGMGDIVSFVEKAQETLDLEKTQKLQKRLIENEFNL 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF +Q + + +MGS+ +I MIPG+ K+ P Q + E +LK++EA+I +MT +ER+KP
Sbjct: 330 EDFYEQLQELKKMGSLQNLIDMIPGLSKVVPKQEID-ESNLKVIEAIINSMTKDERQKPG 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
++ S RR R+A+ SG Q V+ L+ Q +M+ MK++ + + G
Sbjct: 389 IINGS--RRSRIAKGSGTRVQDVNMLLKQFMEMKKMMKSVTKMAKSG 433
>gi|418645795|ref|ZP_13207913.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-55]
gi|375022328|gb|EHS15811.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-55]
Length = 447
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/413 (47%), Positives = 299/413 (72%), Gaps = 4/413 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTQLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK G +G + A+
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKVNAI 442
>gi|89895345|ref|YP_518832.1| hypothetical protein DSY2599 [Desulfitobacterium hafniense Y51]
gi|89334793|dbj|BAE84388.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 457
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/399 (51%), Positives = 286/399 (71%), Gaps = 4/399 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+++G ++ + P QQ++KIV +E+V LMGG
Sbjct: 35 MREVRMALLEADVNFKVVKDFVAKVKERSIGQEVLESLSPGQQVIKIVNEEMVALMGGVS 94
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ + PTVI+L GLQG GKTT AKLAN LKKQGK +LVA D+YRPAAI QL +L
Sbjct: 95 SKINISSKPPTVIMLVGLQGAGKTTHGAKLANMLKKQGKHPLLVACDIYRPAAIKQLEVL 154
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV++ G E P +IA L+ A + +DVVI+DTAGRL I++ +M EL+++K
Sbjct: 155 GEQIKVPVFSLGQE-NPVKIAAASLQHANSQGLDVVIIDTAGRLHINEELMGELREIKVS 213
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGGAALSVK V+G PIK
Sbjct: 214 VKPHEILLVVDAMTGQDAVNVAESFHNELGVDGIILTKLDGDTRGGAALSVKAVTGCPIK 273
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+M+ +EPF+P+RMA RILGMGDVL+ +EKAQE ++ A EM++K+ F +
Sbjct: 274 FAGVGEKMDAIEPFFPERMASRILGMGDVLTLIEKAQEAFDEKQAREMEQKLRKQEFTLD 333
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG ++ ++ MIPG+GK V+ EK + +EA+I +MT EER KP L
Sbjct: 334 DFLDQMQQLKKMGPLNSLLEMIPGVGK-QMKDVQVDEKDMAHVEAIIHSMTAEERRKPAL 392
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ +S R++R+A+ SG + Q+V +L+ Q QM+ MK
Sbjct: 393 IKDS--RKRRIAKGSGTSIQEVGRLLKQFEQMQKMMKQF 429
>gi|219849542|ref|YP_002463975.1| signal recognition particle protein [Chloroflexus aggregans DSM
9485]
gi|219543801|gb|ACL25539.1| signal recognition particle protein [Chloroflexus aggregans DSM
9485]
Length = 450
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 287/401 (71%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M+ +R ALLEADV+ VV+ FV V+E+A+G + + + P QQ++KIV EL+ L+G E
Sbjct: 31 MKQVRLALLEADVNFRVVKDFVAKVTEKAIGEEVTKSLTPHQQVIKIVHQELINLLGTEH 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A+ PTVI+L GLQG GKTT++AKLA +L+K+GK +LVA DVYRPAAI QL L
Sbjct: 91 VPLQEARPGPTVIMLVGLQGTGKTTLAAKLALHLRKKGKRVLLVAADVYRPAAITQLQAL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ +PVY+ GT+ P IA+ LE A+K+ +VVI+DTAGRLQID+ +M EL+ ++
Sbjct: 151 GRQLNIPVYSEGTQASPPDIAEHALEHARKELFNVVIIDTAGRLQIDEPLMQELEQIEAR 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++PTE LLVVDAMTGQEA + TFN + +TG ++TK+DGD+RGGAALSV+ V+G PIK
Sbjct: 211 VHPTERLLVVDAMTGQEAVRVAETFNQRVKLTGVVMTKMDGDARGGAALSVRAVTGVPIK 270
Query: 241 LVGRGERME--DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 298
+ GE+++ LE F+PDR+A RILGMGDVLS +E+A+++ E A++MQK++ FD
Sbjct: 271 FLSTGEKVDGNTLEIFHPDRLASRILGMGDVLSLIERAEQLYDAEQAKKMQKRLSKGEFD 330
Query: 299 FNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
F DFL + ++G + ++I MIPG+ ++ + E+ +K +EA+I +MTPEER P
Sbjct: 331 FEDFLNSLHQMRKLGPLQQIIAMIPGLNQLARNEELLDERHVKRVEAIIYSMTPEERRHP 390
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E++ S RR+R+A+ SG + Q+VSQLV Q QM+ MK L
Sbjct: 391 EIIKGS--RRERIARGSGTSVQEVSQLVKQFQQMQRMMKQL 429
>gi|392964046|ref|ZP_10329467.1| signal recognition particle protein [Fibrisoma limi BUZ 3]
gi|387846941|emb|CCH51511.1| signal recognition particle protein [Fibrisoma limi BUZ 3]
Length = 439
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/411 (49%), Positives = 283/411 (68%), Gaps = 4/411 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRAL +ADV+ V + + ++A+ ++ V P Q VKIV++EL LMGGE
Sbjct: 31 VKEVRRALTDADVNYKVAKDITDRIRDKALDRKVLISVEPGQLFVKIVQEELTDLMGGE- 89
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++ + K P V+L+AGLQG GKTT S KLA+YLKKQG++ +LVA D+YRPAAIDQL +L
Sbjct: 90 AQSINIKGEPAVVLIAGLQGSGKTTFSGKLASYLKKQGRNVLLVAADIYRPAAIDQLKVL 149
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQVGV VY QIA+ G+ +A+K VVIVDTAGRL +D+AMM E+++VKR
Sbjct: 150 GEQVGVEVYAEPENKNAVQIAQNGIAQARKTGKKVVIVDTAGRLAVDEAMMQEIENVKRA 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++PTE L VVD+MTGQ+A TFN + G +LTKLDGD+RGGAALS+K V KPIK
Sbjct: 210 ISPTETLFVVDSMTGQDAVNTAKTFNDRLNFDGVVLTKLDGDARGGAALSIKTVVNKPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+ GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ +++A+ + K+ FDFN
Sbjct: 270 FISTGEKMEALDVFYPDRMASRILGMGDVISLVERAQQAFDEDEAKRINAKMRKNQFDFN 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG++ ++GMIPGMGK+ + S K +EA+I +MTP+ERE+PEL
Sbjct: 330 DFLSQLQQIKKMGNVKDLLGMIPGMGKMIK-DLDIDNDSFKPIEAIISSMTPKERERPEL 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
+ S R+KR+A SG QQV+ L+ Q +MR MK + + G L +
Sbjct: 389 IDGS--RKKRIAAGSGTDIQQVNNLLKQFDEMRKMMKKMNTMQASGKLNKM 437
>gi|332667956|ref|YP_004450744.1| signal recognition particle protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332336770|gb|AEE53871.1| signal recognition particle protein [Haliscomenobacter hydrossis
DSM 1100]
Length = 450
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/401 (51%), Positives = 275/401 (68%), Gaps = 6/401 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGV-GLIRGVRPDQQLVKIVRDELVKLMGGE 59
+++IRRAL++ADVS + + F V E+A+G +++ V P Q ++KIV DEL LMGG+
Sbjct: 31 IKEIRRALVDADVSYKIAKEFTDRVKEKALGSDNVLKAVSPGQLMIKIVMDELTDLMGGQ 90
Query: 60 VSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGK-SCMLVAGDVYRPAAIDQLV 118
+ L A +PTVIL+AGLQG GKTT S KLA++LK Q K S +LVA DVYRPAA+DQL
Sbjct: 91 AAGLNLA-GKPTVILIAGLQGSGKTTFSGKLAHWLKTQKKKSPLLVACDVYRPAAMDQLT 149
Query: 119 ILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVK 178
+L EQVGVPVY P QIA + ++ A + DVVIVDTAGRL ID+ MM E+K++K
Sbjct: 150 VLAEQVGVPVYKEPESKNPVQIALKAIQYAIEHKCDVVIVDTAGRLAIDEEMMAEIKNIK 209
Query: 179 RVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKP 238
+ P E L VVDAMTGQ+A FN I G +LTK+DGD+RGGAALSVK GKP
Sbjct: 210 EAILPQETLFVVDAMTGQDAVNTAQVFNETINFDGVVLTKMDGDTRGGAALSVKYTVGKP 269
Query: 239 IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 298
IK GE+M+ LE FYPDRMA RILGMGD++SFVEKAQE +E A++++KKI FD
Sbjct: 270 IKFASTGEKMDALELFYPDRMAQRILGMGDIVSFVEKAQEQFDEELAKKLEKKIQKNKFD 329
Query: 299 FNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
FNDF+ Q + +MG + ++GMIPGM K+T V + K +EA+I++MTP+ER P
Sbjct: 330 FNDFMAQINQIKKMGDLKSIMGMIPGMDKLT-RNVEIDNNAFKKVEAIIQSMTPKERTNP 388
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL S R++R+A+ G+T V+ + Q QMR M N+
Sbjct: 389 DLLNMS--RKQRIAKGCGRTLNDVNMFIKQFEQMRKMMHNM 427
>gi|317055139|ref|YP_004103606.1| signal recognition particle protein [Ruminococcus albus 7]
gi|315447408|gb|ADU20972.1| signal recognition particle protein [Ruminococcus albus 7]
Length = 458
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/399 (49%), Positives = 283/399 (70%), Gaps = 3/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++++ ALLEADVS VV+ FV V+E++VG +++ + P QQ++KIV +ELVKLMG
Sbjct: 32 MKEVKMALLEADVSYKVVKDFVANVTERSVGEDVLKSLTPAQQVIKIVNEELVKLMGEAN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ F P VI++ GLQG GKTT +AKLA K+QG +L+A DVYRPAAIDQL I+
Sbjct: 92 SKINFPSKPPCVIMMCGLQGSGKTTHAAKLAKMFKRQGSRPLLIAADVYRPAAIDQLKIV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
E+ VPV+ G ++ P +I K+GL++AK D+VI+DTAGRL ID+ +MDELKD+K++
Sbjct: 152 AEKAQVPVFEMG-QIDPRKIVKEGLKQAKDYGNDMVIIDTAGRLHIDEELMDELKDIKKI 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P+E++LVVDAM GQ+A + ++F+ +GI ILTKLD D+RGGAALSV V+GKPIK
Sbjct: 211 AEPSEIMLVVDAMIGQDAVKVASSFDEALGIDSVILTKLDSDTRGGAALSVLAVTGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++++ EPF+P+RMA RILGMGD+L+ +EKA + + +E+AE++ KK+ FD N
Sbjct: 271 FVGMGEKLDEFEPFHPERMASRILGMGDMLTLIEKASQTVDEEEAEKLAKKMQEEGFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
D L+Q + + +MGS+ +I M+PG K++ + E +LK EAMI +MT ER+KP +
Sbjct: 331 DLLEQMKQIHKMGSIKNIISMLPGANKVSDEDLEMGEAALKKTEAMIHSMTKAERKKPAI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ P R++R+A SG V+QL+ Q M+ MK
Sbjct: 391 I--DPKRKRRIAAGSGTQVSDVNQLLKQYEDMKKMMKQF 427
>gi|227530556|ref|ZP_03960605.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus vaginalis
ATCC 49540]
gi|227349562|gb|EEJ39853.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus vaginalis
ATCC 49540]
Length = 484
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/417 (48%), Positives = 288/417 (69%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A G +++G+ P QQ+VKIV DEL +LMG E
Sbjct: 32 MREIRLALLEADVNFAVVKDFVKKVREKAAGAEVLKGLNPAQQIVKIVNDELTELMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PTVI++ GLQG GKTT + KLA LK + K+ + +A DVYRPAAI QL
Sbjct: 92 VPLNKSSHIPTVIMMVGLQGAGKTTTAGKLALRLKNEDKARPLFIAADVYRPAAITQLKQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ +Q+ VPV+ GT+V P +I +QG+E AK+ + D VI+DTAGRLQID+ +MDEL ++K+
Sbjct: 152 VADQIDVPVFEKGTDVDPVEIVRQGMEVAKQNHNDYVIIDTAGRLQIDEQLMDELANIKQ 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++NP E+LLV+D+MTGQ A F+ ++ ITG +LTKLDGD+RGGAA+S++ V+GKPI
Sbjct: 212 LVNPDEILLVIDSMTGQNAVNTAQGFDDKLDITGVVLTKLDGDTRGGAAMSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+MEDL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+ K+ FDF
Sbjct: 272 KFVGEGEKMEDLDVFHPDRMASRILGMGDMMTLIEKAQKDFDEEQAQATMDKMRENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q V +MG + +I M+PGM PA + K L + A+I +MTPEERE
Sbjct: 332 NDFLSQMDQVTKMGPLENIIKMMPGMAN-NPALKNLNLDPKQLDHIRAIIYSMTPEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+L+ +P RR+R+A +G+ +V++++ Q QMR MK + G+ + N+
Sbjct: 391 PDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQV----TNGNFNGMQNM 441
>gi|49483400|ref|YP_040624.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA252]
gi|258423922|ref|ZP_05686807.1| signal recognition particle protein [Staphylococcus aureus A9635]
gi|282903791|ref|ZP_06311679.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C160]
gi|282905555|ref|ZP_06313410.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282908530|ref|ZP_06316360.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282910809|ref|ZP_06318612.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282916487|ref|ZP_06324249.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus D139]
gi|282918935|ref|ZP_06326670.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C427]
gi|283770299|ref|ZP_06343191.1| signal recognition particle subunit SRP54 [Staphylococcus aureus
subsp. aureus H19]
gi|283957979|ref|ZP_06375430.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295427723|ref|ZP_06820355.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297591318|ref|ZP_06949956.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MN8]
gi|379020946|ref|YP_005297608.1| Signal recognition particle subunit Ffh SRP54 [Staphylococcus
aureus subsp. aureus M013]
gi|384547481|ref|YP_005736734.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ED133]
gi|384549992|ref|YP_005739244.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus JKD6159]
gi|384867880|ref|YP_005748076.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH60]
gi|387602512|ref|YP_005734033.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ST398]
gi|404478577|ref|YP_006710007.1| signal recognition particle protein [Staphylococcus aureus
08BA02176]
gi|415683827|ref|ZP_11449029.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CGS00]
gi|416839281|ref|ZP_11902675.1| signal recognition particle protein [Staphylococcus aureus O11]
gi|416847445|ref|ZP_11907167.1| signal recognition particle protein [Staphylococcus aureus O46]
gi|417891836|ref|ZP_12535893.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21200]
gi|417896155|ref|ZP_12540122.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21235]
gi|417901448|ref|ZP_12545324.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21266]
gi|418283091|ref|ZP_12895848.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21202]
gi|418308706|ref|ZP_12920312.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21194]
gi|418309899|ref|ZP_12921450.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21331]
gi|418559164|ref|ZP_13123710.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21252]
gi|418561380|ref|ZP_13125871.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21262]
gi|418566688|ref|ZP_13131061.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21264]
gi|418582071|ref|ZP_13146149.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418597679|ref|ZP_13161201.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21342]
gi|418599631|ref|ZP_13163111.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21343]
gi|418603153|ref|ZP_13166544.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21345]
gi|418889028|ref|ZP_13443164.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1524]
gi|418891870|ref|ZP_13445985.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418897774|ref|ZP_13451844.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418900644|ref|ZP_13454701.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418908948|ref|ZP_13462951.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG149]
gi|418917032|ref|ZP_13470991.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418922819|ref|ZP_13476736.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418950562|ref|ZP_13502726.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-160]
gi|418982150|ref|ZP_13529858.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418985818|ref|ZP_13533504.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1500]
gi|418993856|ref|ZP_13541492.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG290]
gi|49241529|emb|CAG40215.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257845951|gb|EEV69980.1| signal recognition particle protein [Staphylococcus aureus A9635]
gi|282316745|gb|EFB47119.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C427]
gi|282319927|gb|EFB50275.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus D139]
gi|282325414|gb|EFB55723.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282327592|gb|EFB57875.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282330847|gb|EFB60361.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282595409|gb|EFC00373.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C160]
gi|283460446|gb|EFC07536.1| signal recognition particle subunit SRP54 [Staphylococcus aureus
subsp. aureus H19]
gi|283470450|emb|CAQ49661.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ST398]
gi|283790128|gb|EFC28945.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295128081|gb|EFG57715.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297576204|gb|EFH94920.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MN8]
gi|298694530|gb|ADI97752.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ED133]
gi|302332841|gb|ADL23034.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus JKD6159]
gi|312438385|gb|ADQ77456.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH60]
gi|315194125|gb|EFU24518.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CGS00]
gi|323441012|gb|EGA98719.1| signal recognition particle protein [Staphylococcus aureus O11]
gi|323442329|gb|EGA99959.1| signal recognition particle protein [Staphylococcus aureus O46]
gi|341841056|gb|EGS82528.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21235]
gi|341845287|gb|EGS86489.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21266]
gi|341851122|gb|EGS92051.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21200]
gi|359830255|gb|AEV78233.1| Signal recognition particle, subunit Ffh SRP54 [Staphylococcus
aureus subsp. aureus M013]
gi|365168688|gb|EHM60026.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21202]
gi|365237732|gb|EHM78575.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21194]
gi|365238022|gb|EHM78861.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21331]
gi|371969958|gb|EHO87396.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21264]
gi|371975455|gb|EHO92749.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21252]
gi|371977591|gb|EHO94855.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21262]
gi|374393741|gb|EHQ65045.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21342]
gi|374393882|gb|EHQ65185.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21345]
gi|374396289|gb|EHQ67530.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21343]
gi|375376734|gb|EHS80253.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-160]
gi|377703112|gb|EHT27428.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377704431|gb|EHT28740.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377705636|gb|EHT29940.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377710481|gb|EHT34719.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377731202|gb|EHT55259.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377736142|gb|EHT60172.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377745906|gb|EHT69881.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG290]
gi|377750206|gb|EHT74144.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377753986|gb|EHT77896.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG149]
gi|377754538|gb|EHT78447.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1524]
gi|377760809|gb|EHT84685.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|404440066|gb|AFR73259.1| signal recognition particle protein [Staphylococcus aureus
08BA02176]
Length = 455
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL KLMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|376261083|ref|YP_005147803.1| signal recognition particle protein [Clostridium sp. BNL1100]
gi|373945077|gb|AEY65998.1| signal recognition particle protein [Clostridium sp. BNL1100]
Length = 448
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/391 (51%), Positives = 278/391 (71%), Gaps = 2/391 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+I+ ALLEADV+ VV+ F+ VSE+AVG ++ + P QQ+VKIV +EL++L+G E
Sbjct: 33 MREIKLALLEADVNFKVVKEFISKVSERAVGSDVLESLTPGQQVVKIVHEELIELLGREQ 92
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ FA PT+ ++AGLQG GKTT + KLAN L+KQGK+ +LVA DVYRPAAI QL +L
Sbjct: 93 SKVTFAPKPPTIFMMAGLQGAGKTTTAGKLANLLRKQGKNPLLVACDVYRPAAIKQLQVL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ +PV+T P QIAK+ + A+ K D+VI+DTAGRL ID+ +MDEL ++K
Sbjct: 153 GNQLNIPVFTLENNQNPVQIAKEAVSFAEMKQHDLVIIDTAGRLHIDEKLMDELLNIKNS 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + TFN ++GI G +LTKLDGD+RGGAALSVK V+GKPIK
Sbjct: 213 VKPHEILLVVDSMTGQDAVNVSETFNEKLGIDGVVLTKLDGDTRGGAALSVKSVTGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE++ D+EPF+PDRMA RILGMGDVLS +EKAQE ++ A E++KK+ + F
Sbjct: 273 FAAMGEKLNDIEPFFPDRMASRILGMGDVLSLIEKAQEAYDEKKAIELEKKMRTMTFTLE 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG + ++GM+PG+ + EK + EA+I++MT +ER P +
Sbjct: 333 DFLDQMQQIKKMGPIGDLLGMMPGVDSKALKDIDIDEKQMGRTEAIIQSMTRKERLDPSI 392
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 391
+ S RRKR++ SG T Q+V+ L+ Q Q
Sbjct: 393 INGS--RRKRISAGSGTTIQEVNALLKQFEQ 421
>gi|421489046|ref|ZP_15936434.1| signal recognition particle protein [Streptococcus oralis SK304]
gi|400368263|gb|EJP21278.1| signal recognition particle protein [Streptococcus oralis SK304]
Length = 523
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 286/401 (71%), Gaps = 4/401 (0%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHDVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN+++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNVQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DF+ Q V MG M ++ MIPGM + Q ++ E+ + A++ +MTPEERE P+
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMANNSALQNMKVDERQIARKRAIVSSMTPEERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 400
LL +P RR+R+A SG T +V++ + Q + M+ +M
Sbjct: 393 LL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQGIM 431
>gi|307277934|ref|ZP_07559018.1| signal recognition particle protein [Enterococcus faecalis TX0860]
gi|306505331|gb|EFM74517.1| signal recognition particle protein [Enterococcus faecalis TX0860]
Length = 472
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 287/401 (71%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+AVGV ++ + P QQ+VKIV +EL K +G E
Sbjct: 32 MREIRLALLEADVNLQVVKDFTKPVRERAVGVEVLESLSPAQQIVKIVDEELTKTLGSET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAIDQL +
Sbjct: 92 VELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAIDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDELK +K
Sbjct: 152 LGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V+G PI
Sbjct: 212 LANPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAALSIRAVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+ +FDF
Sbjct: 272 KFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP ERE P
Sbjct: 332 NDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 392 DLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESKKMMQQM 430
>gi|422692890|ref|ZP_16750905.1| signal recognition particle protein [Enterococcus faecalis TX0031]
gi|315152349|gb|EFT96365.1| signal recognition particle protein [Enterococcus faecalis TX0031]
Length = 472
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 287/401 (71%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+AVGV ++ + P QQ+VKIV +EL K +G E
Sbjct: 32 MREIRLALLEADVNLQVVKDFTKRVRERAVGVEVLESLSPAQQIVKIVDEELTKTLGSET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAIDQL +
Sbjct: 92 VELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAIDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDELK +K
Sbjct: 152 LGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V+G PI
Sbjct: 212 LTNPNEILLVVDAMTGQDAVNVAVSFNEQLGITGVVITKMDGDTRGGAALSIRAVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+ +FDF
Sbjct: 272 KFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP ERE P
Sbjct: 332 NDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 392 DLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESKKMMQQM 430
>gi|323489558|ref|ZP_08094785.1| signal recognition particle-like (SRP) component [Planococcus
donghaensis MPA1U2]
gi|323396689|gb|EGA89508.1| signal recognition particle-like (SRP) component [Planococcus
donghaensis MPA1U2]
Length = 452
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/404 (48%), Positives = 294/404 (72%), Gaps = 4/404 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R AL+EADV+L VV+ FV+ +SE+A+G ++ + P QQ+VKIV+DEL +LMGGE
Sbjct: 32 MREVRFALIEADVNLKVVKEFVKKISERAIGQDVMDSLTPGQQVVKIVKDELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
++ F+ +PTVI++ GLQG GKTT S KLAN L+ K + +LVA DVYRPAAI QL
Sbjct: 92 RKIEFSTKQPTVIMMVGLQGAGKTTTSGKLANLLRRKHNRKPLLVAADVYRPAAIQQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PV++ GT++ P +IA+Q +E AK +++D VI+DTAGRL +D+A+M ELKD++
Sbjct: 152 IGKQLSLPVFSKGTDMSPVEIARQAIEHAKAEHLDTVIIDTAGRLHVDEALMQELKDIRA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+ LVVD+MTGQ+A + F+ IGITG +LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 LKEPDEIFLVVDSMTGQDAVNVAQNFDEAIGITGVVLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ LE F+P+RMA RILGMGD+LS +EKAQ + + A+E+++K ++ F F
Sbjct: 272 KFVGMGEKMDALEAFHPERMASRILGMGDMLSLIEKAQSSVDEVKAKELEEKFRTSTFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKS-LKIMEAMIEAMTPEEREKP 358
+DFL+Q V +MG + ++ M+PG KI + + ++S + +EA+I +MT +E+ P
Sbjct: 332 DDFLEQMSQVKQMGPLDEILKMLPGANKIKGLENAKVDESQMDRVEAIIYSMTKKEKTTP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
E++ S R+KR+A+ SG Q V++L+ Q M+ MK + G+
Sbjct: 392 EIINAS--RKKRIAKGSGTNIQDVNRLLKQFEDMKKMMKQMSGM 433
>gi|422731615|ref|ZP_16787973.1| signal recognition particle protein [Enterococcus faecalis TX0645]
gi|422739135|ref|ZP_16794318.1| signal recognition particle protein [Enterococcus faecalis TX2141]
gi|315144939|gb|EFT88955.1| signal recognition particle protein [Enterococcus faecalis TX2141]
gi|315162383|gb|EFU06400.1| signal recognition particle protein [Enterococcus faecalis TX0645]
Length = 472
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 287/401 (71%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+AVGV ++ + P QQ+VKIV +EL K +G E
Sbjct: 32 MREIRLALLEADVNLQVVKDFTKRVRERAVGVEVLESLSPAQQIVKIVDEELTKTLGSET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAIDQL +
Sbjct: 92 VELNKSSKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAIDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDELK +K
Sbjct: 152 LGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V+G PI
Sbjct: 212 LANPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAALSIRAVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+ +FDF
Sbjct: 272 KFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP ERE P
Sbjct: 332 NDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 392 DLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESKKMMQQM 430
>gi|288928375|ref|ZP_06422222.1| signal recognition particle protein [Prevotella sp. oral taxon 317
str. F0108]
gi|288331209|gb|EFC69793.1| signal recognition particle protein [Prevotella sp. oral taxon 317
str. F0108]
Length = 450
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/428 (49%), Positives = 291/428 (67%), Gaps = 13/428 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKTFTDTVKQKALGMNVLTAVKPGQLMVKIVHDELAALMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L +RP +IL++GLQG GKTT S KLAN LK KQ K+ +LVA DVYRPAAI+QL +
Sbjct: 91 VGLQLT-NRPAIILMSGLQGSGKTTFSGKLANLLKGKQHKNPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ +QVGVPVY+ +IA + EAK K DVVIVDTAGRL +D+ MMDE+ +K+
Sbjct: 150 VAQQVGVPVYSEPDNKNVVEIANNAIREAKAKGNDVVIVDTAGRLAVDEEMMDEIYRLKQ 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
LNP E L VVD+MTGQ+A FN + I G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 ALNPDETLFVVDSMTGQDAVNTAREFNDRLDIDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME ++ F+P+RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKMEAIDVFHPERMADRILGMGDIVSLVERAQEQFDEEEAKRLQKKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFLKQ + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFLKQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFKGIEAIIKSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALK 419
+L S RR+R+A+ SG Q+V++L+ Q Q R MK +M G ++ ++ +
Sbjct: 389 ILNNS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMK----MMTGTNMAKMA----GMA 438
Query: 420 SEQKAPPG 427
S+ K PG
Sbjct: 439 SKMKGMPG 446
>gi|421277208|ref|ZP_15728028.1| signal recognition particle protein [Streptococcus mitis SPAR10]
gi|395876489|gb|EJG87565.1| signal recognition particle protein [Streptococcus mitis SPAR10]
Length = 521
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/407 (49%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAIGHEVIDTLNPAQQIIKIVNEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEDARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVIDAMIGQEAANVAREFNDQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRMA RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMASRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ EK + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDEKQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + M+ GVM G
Sbjct: 392 DLL--TPSRRRRIAAGSGNTFIDVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|386728920|ref|YP_006195303.1| Signal recognition particle, subunit FFH/SRP54 [Staphylococcus
aureus subsp. aureus 71193]
gi|418980058|ref|ZP_13527846.1| Signal recognition particle, subunit FFH/Srp54 [Staphylococcus
aureus subsp. aureus DR10]
gi|379992221|gb|EIA13678.1| Signal recognition particle, subunit FFH/Srp54 [Staphylococcus
aureus subsp. aureus DR10]
gi|384230213|gb|AFH69460.1| Signal recognition particle, subunit FFH/SRP54 [Staphylococcus
aureus subsp. aureus 71193]
Length = 461
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL KLMGGE
Sbjct: 38 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGEN 97
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 98 TSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 157
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 158 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKD 217
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 218 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 277
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 278 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 337
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 338 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 397
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 398 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 436
>gi|387780346|ref|YP_005755144.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus LGA251]
gi|344177448|emb|CCC87916.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus LGA251]
Length = 455
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL KLMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSIQEVNRLMKQFNDMKKMMKQF 430
>gi|222097290|ref|YP_002531347.1| signal recognition particle protein [Bacillus cereus Q1]
gi|221241348|gb|ACM14058.1| signal recognition particle protein [Bacillus cereus Q1]
Length = 449
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/406 (49%), Positives = 294/406 (72%), Gaps = 8/406 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVSERAVGQDVMKSLTPGQQVIKVVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDELAQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKLERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 390 QPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|402818507|ref|ZP_10868090.1| signal recognition particle protein Ffh [Paenibacillus alvei DSM
29]
gi|402503973|gb|EJW14505.1| signal recognition particle protein Ffh [Paenibacillus alvei DSM
29]
Length = 460
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/404 (50%), Positives = 284/404 (70%), Gaps = 3/404 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F+ V E+AVG +++ P ++ IV EL +LMGG
Sbjct: 32 MREVRLALLEADVNFKVVKEFIGKVKEKAVGQEVMQSFTPGMVIIDIVNKELTELMGGTA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L A PTVI++ GLQG GKTT S KLA L+KQ +LVA D+YRPAAI QL ++
Sbjct: 92 AKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKMLQKQNHKPLLVAADIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV+ G +V P +IA++GLE AK+ ++D VI+DTAGRL ID+A+M+ELK V
Sbjct: 152 GEQIKVPVFALGDQVSPVEIARRGLEHAKENHLDYVIIDTAGRLHIDEALMEELKQVHAT 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 AKPDEVLLVVDAMTGQDAVNVADSFNQQLELTGVVLTKLDGDTRGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+M+ LEPF+P+RMA RILGMGD+LS +EKAQ + E A+EM+ K+ +A F F+
Sbjct: 272 FATLGEKMDALEPFHPERMASRILGMGDMLSLIEKAQANIDTEKAKEMEMKMRNAAFTFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q + V ++G + +++ MIPGM K+ A ++ E+ + +EA++ +MT EER+ P+
Sbjct: 332 DFLEQMQQVKKLGPIDQILDMIPGMNKMKQNANLKVDERQMGRIEAIVRSMTNEERQDPD 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 403
L+ S RRKR+A SG V++L+ Q +MR MK +M
Sbjct: 392 LINHS--RRKRIAAGSGTALADVNRLIKQFDEMRRMMKQFSDMM 433
>gi|383812645|ref|ZP_09968078.1| signal recognition particle protein [Prevotella sp. oral taxon 306
str. F0472]
gi|383354702|gb|EID32253.1| signal recognition particle protein [Prevotella sp. oral taxon 306
str. F0472]
Length = 451
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/402 (50%), Positives = 280/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKSFTDTVKQKALGMNVLTAVKPGQLMVKIVHDELAELMGGES 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L SRP +IL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAIDQL +
Sbjct: 91 VGLNLT-SRPAIILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAIDQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGVPVY+ ++IA L EAK K DVVI+DTAGRL +D+ MM+E++ +K
Sbjct: 150 VGEQVGVPVYSEPESKNVNEIADHALAEAKAKGYDVVIIDTAGRLAVDEEMMNEIESLKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 HVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP ER PE
Sbjct: 330 NDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPRERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S RR+R+A+ SG + Q+V++L+ Q Q R MK + G
Sbjct: 389 VLNNS--RRQRIAKGSGTSLQEVNRLIKQFDQTRKMMKMVTG 428
>gi|82750841|ref|YP_416582.1| signal recognition particle protein [Staphylococcus aureus RF122]
gi|82656372|emb|CAI80790.1| signal recognition particle protein [Staphylococcus aureus RF122]
Length = 455
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL KLMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIILVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|333371175|ref|ZP_08463137.1| signal recognition particle protein [Desmospora sp. 8437]
gi|332976619|gb|EGK13460.1| signal recognition particle protein [Desmospora sp. 8437]
Length = 449
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/400 (50%), Positives = 288/400 (72%), Gaps = 4/400 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+AVG +++ + P QQ++K+V +EL LMGG
Sbjct: 32 MREVRLALLEADVNYKVVKDFVSKVRERAVGQEVLKSLTPGQQVIKVVNEELSSLMGGTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+L S+P+VIL+ GLQG GKTT + KL +LKKQ + +LVAGDVYRPAAI QL +L
Sbjct: 92 EKLNLT-SKPSVILMVGLQGAGKTTTTGKLGRFLKKQNRHPLLVAGDVYRPAAIRQLEVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+QV +PV++ G + P +IA G+ +AK++ D V++DTAGRL ID+ MM ELK ++
Sbjct: 151 GDQVELPVFSMGDQESPVRIAVDGVAKAKEEGHDTVLIDTAGRLHIDETMMGELKAIREK 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +FN E+G+TG ILTKLDGD+RGGAALSVK V+ P+K
Sbjct: 211 VQPDEILLVVDAMTGQDAVNVAESFNRELGLTGVILTKLDGDTRGGAALSVKSVTDCPVK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + QE A+++++K+ + F F+
Sbjct: 271 FVGMGEKVDALEPFHPERMASRILGMGDVLTLIEKAQASVDQEKAKDLERKLRTQQFTFD 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V MG + ++GM+PGMG++ + ++ EK L +EA+I +MT EE++ PE
Sbjct: 331 DFLEQMEQVRNMGPLDELLGMMPGMGQMKNMKNLQVDEKQLTKVEAIIRSMTREEKQNPE 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ RR+R+A SG T Q V++L+ Q M+ MKN
Sbjct: 391 IINAG--RRRRIAAGSGTTVQDVNRLIKQFMDMKKMMKNF 428
>gi|42782937|ref|NP_980184.1| signal recognition particle protein [Bacillus cereus ATCC 10987]
gi|49478411|ref|YP_037906.1| signal recognition particle protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52141643|ref|YP_085186.1| signal recognition particle protein [Bacillus cereus E33L]
gi|118479067|ref|YP_896218.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacillus
thuringiensis str. Al Hakam]
gi|217961265|ref|YP_002339833.1| signal recognition particle protein [Bacillus cereus AH187]
gi|218904975|ref|YP_002452809.1| signal recognition particle protein [Bacillus cereus AH820]
gi|225865826|ref|YP_002751204.1| signal recognition particle protein [Bacillus cereus 03BB102]
gi|228916482|ref|ZP_04080048.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228935159|ref|ZP_04097986.1| Signal recognition particle protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947564|ref|ZP_04109854.1| Signal recognition particle protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228986988|ref|ZP_04147114.1| Signal recognition particle protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229092887|ref|ZP_04224021.1| Signal recognition particle protein [Bacillus cereus Rock3-42]
gi|229123359|ref|ZP_04252563.1| Signal recognition particle protein [Bacillus cereus 95/8201]
gi|229157421|ref|ZP_04285499.1| Signal recognition particle protein [Bacillus cereus ATCC 4342]
gi|229186085|ref|ZP_04313254.1| Signal recognition particle protein [Bacillus cereus BGSC 6E1]
gi|229197955|ref|ZP_04324670.1| Signal recognition particle protein [Bacillus cereus m1293]
gi|301055335|ref|YP_003793546.1| signal recognition particle protein [Bacillus cereus biovar
anthracis str. CI]
gi|375285768|ref|YP_005106207.1| signal recognition particle protein [Bacillus cereus NC7401]
gi|376267740|ref|YP_005120452.1| Signal recognition particle, subunit Ffh [Bacillus cereus F837/76]
gi|384181658|ref|YP_005567420.1| signal recognition particle protein [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|402556034|ref|YP_006597305.1| signal recognition particle protein [Bacillus cereus FRI-35]
gi|423353547|ref|ZP_17331174.1| signal recognition particle protein [Bacillus cereus IS075]
gi|423374358|ref|ZP_17351696.1| signal recognition particle protein [Bacillus cereus AND1407]
gi|423550406|ref|ZP_17526733.1| signal recognition particle protein [Bacillus cereus ISP3191]
gi|423567260|ref|ZP_17543507.1| signal recognition particle protein [Bacillus cereus MSX-A12]
gi|423574549|ref|ZP_17550668.1| signal recognition particle protein [Bacillus cereus MSX-D12]
gi|423604528|ref|ZP_17580421.1| signal recognition particle protein [Bacillus cereus VD102]
gi|42738864|gb|AAS42792.1| signal recognition particle protein [Bacillus cereus ATCC 10987]
gi|49329967|gb|AAT60613.1| signal recognition particle protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51975112|gb|AAU16662.1| signal recognition particle protein [Bacillus cereus E33L]
gi|118418292|gb|ABK86711.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacillus
thuringiensis str. Al Hakam]
gi|217066657|gb|ACJ80907.1| signal recognition particle protein [Bacillus cereus AH187]
gi|218538723|gb|ACK91121.1| signal recognition particle protein [Bacillus cereus AH820]
gi|225787793|gb|ACO28010.1| signal recognition particle protein [Bacillus cereus 03BB102]
gi|228585534|gb|EEK43637.1| Signal recognition particle protein [Bacillus cereus m1293]
gi|228597261|gb|EEK54912.1| Signal recognition particle protein [Bacillus cereus BGSC 6E1]
gi|228626148|gb|EEK82897.1| Signal recognition particle protein [Bacillus cereus ATCC 4342]
gi|228660135|gb|EEL15771.1| Signal recognition particle protein [Bacillus cereus 95/8201]
gi|228690509|gb|EEL44292.1| Signal recognition particle protein [Bacillus cereus Rock3-42]
gi|228772766|gb|EEM21206.1| Signal recognition particle protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228812084|gb|EEM58415.1| Signal recognition particle protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228824524|gb|EEM70329.1| Signal recognition particle protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228843061|gb|EEM88143.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|300377504|gb|ADK06408.1| signal recognition particle protein [Bacillus cereus biovar
anthracis str. CI]
gi|324327742|gb|ADY23002.1| signal recognition particle protein [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|358354295|dbj|BAL19467.1| signal recognition particle protein [Bacillus cereus NC7401]
gi|364513540|gb|AEW56939.1| Signal recognition particle, subunit Ffh [Bacillus cereus F837/76]
gi|401089360|gb|EJP97531.1| signal recognition particle protein [Bacillus cereus IS075]
gi|401094270|gb|EJQ02352.1| signal recognition particle protein [Bacillus cereus AND1407]
gi|401190022|gb|EJQ97072.1| signal recognition particle protein [Bacillus cereus ISP3191]
gi|401212074|gb|EJR18820.1| signal recognition particle protein [Bacillus cereus MSX-D12]
gi|401214348|gb|EJR21078.1| signal recognition particle protein [Bacillus cereus MSX-A12]
gi|401245148|gb|EJR51506.1| signal recognition particle protein [Bacillus cereus VD102]
gi|401797244|gb|AFQ11103.1| signal recognition particle protein [Bacillus cereus FRI-35]
Length = 449
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/406 (49%), Positives = 294/406 (72%), Gaps = 8/406 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVSERAVGQDVMKSLTPGQQVIKVVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDELAKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKLERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 390 QPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|315282799|ref|ZP_07871124.1| signal recognition particle protein [Listeria marthii FSL S4-120]
gi|313613554|gb|EFR87373.1| signal recognition particle protein [Listeria marthii FSL S4-120]
Length = 450
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/401 (49%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIKTVSERAVGADVMKSLTPGQQVIKIVQEELTSLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK++++D VI+DTAGRL ID+ +MDELK VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHLDYVIIDTAGRLHIDETLMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IAKPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ +
Sbjct: 272 KFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKDNSMTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT E++ P
Sbjct: 332 DDFLDQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKNEKDNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 392 DIINAS--RRKRIARGSGRPVQEINRLLKQFAEMKKMMKQM 430
>gi|212693973|ref|ZP_03302101.1| hypothetical protein BACDOR_03497 [Bacteroides dorei DSM 17855]
gi|237710361|ref|ZP_04540842.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|345516836|ref|ZP_08796322.1| signal recognition particle protein [Bacteroides dorei 5_1_36/D4]
gi|423239666|ref|ZP_17220782.1| signal recognition particle protein [Bacteroides dorei CL03T12C01]
gi|212663505|gb|EEB24079.1| signal recognition particle protein [Bacteroides dorei DSM 17855]
gi|229437723|gb|EEO47800.1| signal recognition particle protein [Bacteroides dorei 5_1_36/D4]
gi|229455823|gb|EEO61544.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|392645706|gb|EIY39429.1| signal recognition particle protein [Bacteroides dorei CL03T12C01]
Length = 440
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/412 (49%), Positives = 282/412 (68%), Gaps = 5/412 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKGFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTALMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ELV + RP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 AELVL-EGRPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+ VPVY+ P QIA + EAK K D+VIVDTAGRL ID+ MM+E++ +K+
Sbjct: 150 LGEQIEVPVYSELDSKNPVQIALNAIHEAKAKGYDLVIVDTAGRLAIDEQMMNEIEAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPDETLFVVDSMTGQDAVNTAREFNERLDFNGVVLTKLDGDTRGGAALSIRTVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP+ER PE
Sbjct: 330 NDFLSQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPQERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
+L + RR R+A+ SG + Q+V++L+ Q Q R MK + G G +P L
Sbjct: 389 IL--NGTRRTRIAKGSGTSIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMPKL 438
>gi|229549880|ref|ZP_04438605.1| signal recognition particle protein [Enterococcus faecalis ATCC
29200]
gi|255972664|ref|ZP_05423250.1| signal recognition particle protein [Enterococcus faecalis T1]
gi|256959109|ref|ZP_05563280.1| signal recognition particle protein [Enterococcus faecalis DS5]
gi|257079141|ref|ZP_05573502.1| signal recognition particle protein [Enterococcus faecalis JH1]
gi|294781588|ref|ZP_06746924.1| signal recognition particle protein [Enterococcus faecalis PC1.1]
gi|307269511|ref|ZP_07550850.1| signal recognition particle protein [Enterococcus faecalis TX4248]
gi|312951630|ref|ZP_07770525.1| signal recognition particle protein [Enterococcus faecalis TX0102]
gi|384518726|ref|YP_005706031.1| signal recognition particle protein [Enterococcus faecalis 62]
gi|397700009|ref|YP_006537797.1| signal recognition particle protein [Enterococcus faecalis D32]
gi|422708604|ref|ZP_16766132.1| signal recognition particle protein [Enterococcus faecalis TX0027]
gi|422727183|ref|ZP_16783626.1| signal recognition particle protein [Enterococcus faecalis TX0312]
gi|422734180|ref|ZP_16790474.1| signal recognition particle protein [Enterococcus faecalis TX1341]
gi|422869223|ref|ZP_16915743.1| signal recognition particle protein [Enterococcus faecalis TX1467]
gi|229304953|gb|EEN70949.1| signal recognition particle protein [Enterococcus faecalis ATCC
29200]
gi|255963682|gb|EET96158.1| signal recognition particle protein [Enterococcus faecalis T1]
gi|256949605|gb|EEU66237.1| signal recognition particle protein [Enterococcus faecalis DS5]
gi|256987171|gb|EEU74473.1| signal recognition particle protein [Enterococcus faecalis JH1]
gi|294451284|gb|EFG19750.1| signal recognition particle protein [Enterococcus faecalis PC1.1]
gi|306514131|gb|EFM82707.1| signal recognition particle protein [Enterococcus faecalis TX4248]
gi|310630347|gb|EFQ13630.1| signal recognition particle protein [Enterococcus faecalis TX0102]
gi|315037112|gb|EFT49044.1| signal recognition particle protein [Enterococcus faecalis TX0027]
gi|315158208|gb|EFU02225.1| signal recognition particle protein [Enterococcus faecalis TX0312]
gi|315168902|gb|EFU12919.1| signal recognition particle protein [Enterococcus faecalis TX1341]
gi|323480859|gb|ADX80298.1| signal recognition particle protein [Enterococcus faecalis 62]
gi|329571907|gb|EGG53585.1| signal recognition particle protein [Enterococcus faecalis TX1467]
gi|397336648|gb|AFO44320.1| signal recognition particle protein [Enterococcus faecalis D32]
Length = 472
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 287/401 (71%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+AVGV ++ + P QQ+VKIV +EL K +G E
Sbjct: 32 MREIRLALLEADVNLQVVKDFTKRVRERAVGVEVLESLSPAQQIVKIVDEELTKTLGSET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAIDQL +
Sbjct: 92 VELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAIDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDELK +K
Sbjct: 152 LGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V+G PI
Sbjct: 212 LTNPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAALSIRAVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+ +FDF
Sbjct: 272 KFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP ERE P
Sbjct: 332 NDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 392 DLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESKKMMQQM 430
>gi|134299902|ref|YP_001113398.1| signal recognition particle protein [Desulfotomaculum reducens
MI-1]
gi|134052602|gb|ABO50573.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfotomaculum reducens MI-1]
Length = 446
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 287/402 (71%), Gaps = 7/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ FV V +AVG ++ + P QQ++KIVRDEL +L+GG
Sbjct: 31 MREVKMALLEADVNFKVVKEFVAQVKGRAVGQDVLESLSPAQQVIKIVRDELTELLGGTQ 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+++ + PT+I+L GLQG GKTT + KLA L KQG+ ++VAGD+YRPAAI QL +L
Sbjct: 91 AKINLSPKPPTIIMLVGLQGAGKTTTAGKLAKLLSKQGRRPLMVAGDIYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV++ G E P +IA+ +E+A D+VI+DTAGRL I++ +MDEL ++K
Sbjct: 151 GDQLNIPVFSMGQE-NPVKIAQSAVEQANSTGRDLVIIDTAGRLHINEELMDELANIKST 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQEA + TFN ++G+ G ++TKLDGD+RGGAALSV++V+G PIK
Sbjct: 210 VRPHEILLVVDAMTGQEAVNVADTFNQKLGLDGIVMTKLDGDARGGAALSVRKVTGTPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++ LEPFYPDRMA RILGMGDVL+ +EKAQ E A ++ KKI A+F+
Sbjct: 270 FAGMGEKLDALEPFYPDRMADRILGMGDVLTLIEKAQANFDAEQAAKLNKKIRQADFNLE 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMTPEEREK 357
DFL+Q + V ++G + +V+GMIPGMGK+T Q+++ + K L +EA+I +MT ER
Sbjct: 330 DFLEQMQQVKKLGPLEQVLGMIPGMGKLT-KQLKDQQLDGKELAQVEAIIYSMTVWERHH 388
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
PE + S R+KR+A+ SG Q V+QL+ Q Q R MK +
Sbjct: 389 PEKIDGS--RKKRIARGSGTRVQDVNQLLKQFEQTRKMMKQI 428
>gi|317129234|ref|YP_004095516.1| signal recognition particle protein [Bacillus cellulosilyticus DSM
2522]
gi|315474182|gb|ADU30785.1| signal recognition particle protein [Bacillus cellulosilyticus DSM
2522]
Length = 449
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/404 (47%), Positives = 295/404 (73%), Gaps = 4/404 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F+ +V E+AVG ++ + P QQ++K+V +EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFISSVKERAVGQEVLESLTPGQQVIKVVNEELTSLMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTV+++ GLQG GKTT + KLAN+L KK + ++VA D+YRPAAI QL
Sbjct: 92 SKIAVASKPPTVVMMVGLQGAGKTTTTGKLANHLRKKHNRKPLMVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAK +E+AK+++ D V++DTAGRL +D+ +M EL+++K
Sbjct: 152 LGKQLDMPVFSMGDQVSPVEIAKNAMEKAKEEHHDYVLIDTAGRLHVDEELMGELEEIKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LLVVDAMTGQ+A + +FN +GITG +LTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 LTSPDEILLVVDAMTGQDAVNVAESFNERLGITGVVLTKLDGDTRGGAALSIRSVTDTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ + ++ A E++KK++S + F
Sbjct: 272 KFAGMGEKVDALEPFHPDRMASRILGMGDVLTLIEKAQTNVDEKKARELEKKMLSNDITF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + ++ M+PG GK+ + ++ +K L +EA++++MT E+E P
Sbjct: 332 DDFLEQLNQVKSMGPLDEILSMMPGAGKMKGLKNIQVDDKQLGHIEAIVQSMTKAEKEDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+L S RR+R+A+ SG + Q+V++L+ Q +M+ MK + G+
Sbjct: 392 SILNAS--RRRRIAKGSGTSIQEVNRLIKQFGEMKKMMKQMAGM 433
>gi|260591562|ref|ZP_05857020.1| signal recognition particle protein [Prevotella veroralis F0319]
gi|260536593|gb|EEX19210.1| signal recognition particle protein [Prevotella veroralis F0319]
Length = 451
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/402 (50%), Positives = 281/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKSFTDTVKQKALGMNVLTAVKPGQLMVKIVHDELAELMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L +RP +IL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAIDQL +
Sbjct: 91 VGLNLT-NRPAIILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAIDQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGVPVY+ ++IA L EAK K DVVI+DTAGRL +D+ MM+E++ +K
Sbjct: 150 VGEQVGVPVYSELENKNVNEIADHALAEAKAKGCDVVIIDTAGRLAVDEEMMNEIESLKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 HVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S RR+R+A+ SG + Q+V++L+ Q Q R MK + G
Sbjct: 389 VLNNS--RRQRIAKGSGTSLQEVNRLIKQFDQTRKMMKMVTG 428
>gi|170758261|ref|YP_001787761.1| signal recognition particle protein [Clostridium botulinum A3 str.
Loch Maree]
gi|169405250|gb|ACA53661.1| signal recognition particle protein [Clostridium botulinum A3 str.
Loch Maree]
Length = 449
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/393 (49%), Positives = 288/393 (73%), Gaps = 3/393 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+++V+E+ +G ++ + P QQ++KIV +EL +LMG
Sbjct: 32 MREVKLALLEADVNYKVVKNFIKSVTEKCMGNEVLGSLTPGQQVIKIVNEELTELMGSTE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L + S TVI+L GLQG GKTT++ KLA +L+K+ K +LVA DVYRPAAI QL ++
Sbjct: 92 STLNSSTSGLTVIMLVGLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV+T G ++ P I+K +E AK +VVI+DTAGRL ID+ +MDEL ++K
Sbjct: 152 GKQIDIPVFTMGDKLNPVDISKAAIEHAKNNKNNVVIIDTAGRLHIDEELMDELHNIKGE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP+E+LLVVDAMTGQ+A + FN ++ I+G ILTKLDGD+RGGAALS+K ++GKPIK
Sbjct: 212 VNPSEILLVVDAMTGQDAVNVANNFNDKLDISGVILTKLDGDTRGGAALSIKSMTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + +E A+E+ +++++ F+F
Sbjct: 272 FVGLGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEEKAKEIGERMLNQEFNFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+ + + ++G +++++ M+PGM ++ + +EK +K EA+I +MT +ER P
Sbjct: 332 DFLESMQQMKKLGPINKLLEMMPGMNSKELKNIDLSSSEKEMKKTEAIISSMTIKERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 391
L++ SP R++R+A+ SG Q V++L+ FQ
Sbjct: 392 SLISSSPSRKRRIAKGSGTNVQNVNKLLKD-FQ 423
>gi|229098314|ref|ZP_04229261.1| Signal recognition particle protein [Bacillus cereus Rock3-29]
gi|229104407|ref|ZP_04235076.1| Signal recognition particle protein [Bacillus cereus Rock3-28]
gi|229117331|ref|ZP_04246709.1| Signal recognition particle protein [Bacillus cereus Rock1-3]
gi|407706304|ref|YP_006829889.1| hypothetical protein MC28_3068 [Bacillus thuringiensis MC28]
gi|423378316|ref|ZP_17355600.1| signal recognition particle protein [Bacillus cereus BAG1O-2]
gi|423441424|ref|ZP_17418330.1| signal recognition particle protein [Bacillus cereus BAG4X2-1]
gi|423448350|ref|ZP_17425229.1| signal recognition particle protein [Bacillus cereus BAG5O-1]
gi|423464498|ref|ZP_17441266.1| signal recognition particle protein [Bacillus cereus BAG6O-1]
gi|423533840|ref|ZP_17510258.1| signal recognition particle protein [Bacillus cereus HuB2-9]
gi|423540891|ref|ZP_17517282.1| signal recognition particle protein [Bacillus cereus HuB4-10]
gi|423547129|ref|ZP_17523487.1| signal recognition particle protein [Bacillus cereus HuB5-5]
gi|423615894|ref|ZP_17591728.1| signal recognition particle protein [Bacillus cereus VD115]
gi|423623079|ref|ZP_17598857.1| signal recognition particle protein [Bacillus cereus VD148]
gi|228666231|gb|EEL21695.1| Signal recognition particle protein [Bacillus cereus Rock1-3]
gi|228679105|gb|EEL33313.1| Signal recognition particle protein [Bacillus cereus Rock3-28]
gi|228685212|gb|EEL39143.1| Signal recognition particle protein [Bacillus cereus Rock3-29]
gi|401128944|gb|EJQ36627.1| signal recognition particle protein [Bacillus cereus BAG5O-1]
gi|401172079|gb|EJQ79300.1| signal recognition particle protein [Bacillus cereus HuB4-10]
gi|401178850|gb|EJQ86023.1| signal recognition particle protein [Bacillus cereus HuB5-5]
gi|401259852|gb|EJR66026.1| signal recognition particle protein [Bacillus cereus VD148]
gi|401260431|gb|EJR66604.1| signal recognition particle protein [Bacillus cereus VD115]
gi|401636582|gb|EJS54336.1| signal recognition particle protein [Bacillus cereus BAG1O-2]
gi|402418085|gb|EJV50385.1| signal recognition particle protein [Bacillus cereus BAG4X2-1]
gi|402420765|gb|EJV53036.1| signal recognition particle protein [Bacillus cereus BAG6O-1]
gi|402464059|gb|EJV95759.1| signal recognition particle protein [Bacillus cereus HuB2-9]
gi|407383989|gb|AFU14490.1| Signal recognition particle protein [Bacillus thuringiensis MC28]
Length = 449
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/403 (49%), Positives = 293/403 (72%), Gaps = 8/403 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVSERAVGQDVMKSLTPGQQVIKVVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDELAKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VANPDEIFLVVDAMTGQDAVNVAQSFHDQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKLERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK +
Sbjct: 390 QPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTM 430
>gi|300772045|ref|ZP_07081915.1| signal recognition particle protein [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760348|gb|EFK57174.1| signal recognition particle protein [Sphingobacterium spiritivorum
ATCC 33861]
Length = 445
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/400 (52%), Positives = 278/400 (69%), Gaps = 5/400 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++IR+ALL+ADV+ + F V ++A+G ++ + P Q L KI+ DEL +LMGG V
Sbjct: 31 MKEIRKALLDADVNYKTAKSFTDDVKQKALGQNVLTSISPGQLLTKIMNDELTELMGGAV 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+EL +K+ PTVIL+AGL G GKTT S KLANYLK K+GK +LVAGDVYRPAAIDQL +
Sbjct: 91 TELDTSKN-PTVILIAGLNGAGKTTFSGKLANYLKDKKGKKPLLVAGDVYRPAAIDQLEV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG QVGVPV+ P I++ G+EEAK+ +VVI+DTAGRL ID+A+M E+ VK
Sbjct: 150 LGGQVGVPVFVNRESNDPIAISQAGVEEAKRNGHNVVIIDTAGRLAIDEALMVEITAVKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
P E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAALS+K V KPI
Sbjct: 210 ATKPQEILFVVDSMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAALSIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ ++ A E+QKKI FDF
Sbjct: 270 KFIGTGEKMEALDVFYPDRMASRILGMGDVVSLVERAQQQFDEKQAAELQKKIRKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG+M ++GMIPG+GK V + + K +EA+I++MTP ERE P+
Sbjct: 330 NDFKSQIQQIKKMGNMKDLMGMIPGVGKAL-KDVEVDDNAFKPIEAIIDSMTPFERENPD 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ + RR R+A+ SG +V++L+ Q MR MK +
Sbjct: 389 AIDQK--RRIRIAKGSGTDINEVNKLMKQFGDMRKVMKQM 426
>gi|110639137|ref|YP_679346.1| signal recognition particle subunit FFH/SRP54 [Cytophaga
hutchinsonii ATCC 33406]
gi|110281818|gb|ABG60004.1| signal recognition particle subunit FFH/SRP54 (srp54) [Cytophaga
hutchinsonii ATCC 33406]
Length = 443
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/413 (49%), Positives = 285/413 (69%), Gaps = 4/413 (0%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR+AL++ADV+ V + + E A+G ++ V P Q LVKI +EL KLMGGE
Sbjct: 32 KEIRKALIDADVNYKVAKSVTDDIKEIALGREVLISVSPGQLLVKITHEELTKLMGGEKQ 91
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILG 121
E+ K P+VIL+AGLQG GKTT S KLA Y+KKQ ++ +LVA DVYRPAAIDQL +LG
Sbjct: 92 EISL-KGDPSVILIAGLQGSGKTTFSGKLAAYIKKQNRNVLLVACDVYRPAAIDQLKVLG 150
Query: 122 EQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVL 181
EQVGV VYT KP +I+K +E AKK N VVI+DTAGRL ID+ MM+E+ +VK+ +
Sbjct: 151 EQVGVEVYTEPDNKKPVEISKNAIEYAKKNNKKVVIIDTAGRLAIDEQMMNEIAEVKKAI 210
Query: 182 NPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKL 241
P+E L VVD+MTGQ+A FN I G +LTKLDGD+RGGAA+S++ V KPIK
Sbjct: 211 QPSETLFVVDSMTGQDAVNTAKAFNDRINFDGVVLTKLDGDTRGGAAISIRAVVEKPIKF 270
Query: 242 VGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFND 301
+ GE+M+ L+ FYP+RMA RILGMGDV+S VE+AQ+V +E+ +++ +K+ F+F D
Sbjct: 271 ISTGEKMDALDVFYPERMASRILGMGDVVSLVERAQQVFDEEETKKLNQKLRKNQFNFED 330
Query: 302 FLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELL 361
FL Q + + +MGS+ ++GMIPGMGK+ + + + K +EA+I +MT EERE P+LL
Sbjct: 331 FLNQIQQIKKMGSIKDLVGMIPGMGKMM-KDLPIDDDAFKPIEAIIFSMTKEERENPDLL 389
Query: 362 AESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+ + RR R+A+ SG + QQV+ L+ Q MR MK++ + G P + NL
Sbjct: 390 SGN--RRNRIAKGSGTSIQQVNNLLKQFEDMRKMMKSMNKMQGKGIPPNMKNL 440
>gi|312869933|ref|ZP_07730072.1| signal recognition particle protein [Lactobacillus oris PB013-T2-3]
gi|311094518|gb|EFQ52823.1| signal recognition particle protein [Lactobacillus oris PB013-T2-3]
Length = 480
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/417 (48%), Positives = 288/417 (69%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+AVG +++G+ P QQ+VKIV DEL KLMG E
Sbjct: 32 MREIRLALLEADVNFTVVKDFVKTVREKAVGAEVLKGLNPAQQIVKIVNDELTKLMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++ GLQG GKTT + KLA LK + + M +A DVYRPAAI QL
Sbjct: 92 VPLNKAAHIPTVIMMVGLQGAGKTTTAGKLALRLKNEDHARPMFIAADVYRPAAITQLQQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ +Q+ VPV+ GT+V P +I ++G+E AK+ + D VI+DTAGRLQID+ +MDEL ++K
Sbjct: 152 VADQIDVPVFEKGTDVDPVEIVREGMEVAKQNHNDYVIIDTAGRLQIDEQLMDELANIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++NP E+LLV+D+MTGQ A F+ ++ ITG ILTKLDGD+RGGAA+S++ V+GKPI
Sbjct: 212 LVNPDEILLVIDSMTGQNAVNTAQGFDDKLDITGVILTKLDGDTRGGAAMSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M DL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E K+ FD+
Sbjct: 272 KFVGEGEKMADLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETMDKMRENTFDY 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q V +MG + ++ M+PGM PA + K ++A++ +MTPEERE
Sbjct: 332 NDFLAQMDQVTKMGPLENILKMMPGMAN-NPALKNINIDPKQFAHIKAIVLSMTPEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+L+ +P RR+R+A +G+ +V++++ Q QMR MK + G++ + NL
Sbjct: 391 PDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQV----TNGNMSGMQNL 441
>gi|423612062|ref|ZP_17587923.1| signal recognition particle protein [Bacillus cereus VD107]
gi|401247069|gb|EJR53413.1| signal recognition particle protein [Bacillus cereus VD107]
Length = 449
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/406 (49%), Positives = 294/406 (72%), Gaps = 8/406 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+AVG +++ + P QQ++KIV++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFIKRVSERAVGQDVMKSLTPGQQVIKIVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDELAKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKLERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 390 QPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|229552446|ref|ZP_04441171.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus rhamnosus
LMS2-1]
gi|258539816|ref|YP_003174315.1| signal recognition particle protein [Lactobacillus rhamnosus Lc
705]
gi|385835468|ref|YP_005873242.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
8530]
gi|418070818|ref|ZP_12708093.1| signal recognition particle protein [Lactobacillus rhamnosus R0011]
gi|421768780|ref|ZP_16205490.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP2]
gi|421771068|ref|ZP_16207729.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP3]
gi|423078848|ref|ZP_17067525.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
21052]
gi|229314183|gb|EEN80156.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus rhamnosus
LMS2-1]
gi|257151492|emb|CAR90464.1| Signal recognition particle protein [Lactobacillus rhamnosus Lc
705]
gi|355394959|gb|AER64389.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
8530]
gi|357540238|gb|EHJ24255.1| signal recognition particle protein [Lactobacillus rhamnosus R0011]
gi|357549136|gb|EHJ30984.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
21052]
gi|411185629|gb|EKS52756.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP2]
gi|411186503|gb|EKS53627.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP3]
Length = 478
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/416 (49%), Positives = 289/416 (69%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ F++ V +AVG ++ + P QQ++KIV DELVK MG
Sbjct: 32 MREIRLALLEADVNFDVVKTFIKNVRTKAVGSEVLESLTPAQQIIKIVNDELVKTMGEAA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++AGLQG GKTT KL+ YL + K+ +L+A DVYRPAAIDQL
Sbjct: 92 VPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMENEKARPLLIAADVYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV+ GT+ P +I +QGL AK+ D V++DTAGRLQID+ +M ELK++K
Sbjct: 152 IGKQLNVPVFEMGTDTDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMTELKNIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A+EM +KI +FDF
Sbjct: 272 KFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKTYDEKQAQEMAEKIRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
NDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+ERE P
Sbjct: 332 NDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPKEREDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L L
Sbjct: 392 DLL--NPSRRRRIAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDGL 441
>gi|357038757|ref|ZP_09100554.1| signal recognition particle protein [Desulfotomaculum gibsoniae DSM
7213]
gi|355359549|gb|EHG07311.1| signal recognition particle protein [Desulfotomaculum gibsoniae DSM
7213]
Length = 454
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 287/401 (71%), Gaps = 3/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRAL+ ADV+ VV+ F+ + E+AVG+ +++ + P QQ++KIV DEL LMGG
Sbjct: 32 LKEVRRALIGADVNFLVVKDFIARIRERAVGIDVLQSLTPAQQVIKIVHDELTSLMGGTR 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ A S PTV+++ GL G GKTT +AKLAN++++QG+ +LVA D+YRPAAI QL +L
Sbjct: 92 SKIELAPSPPTVVMMVGLHGAGKTTTTAKLANHMRRQGRRPLLVACDIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ G V P IA+ +E+A+++ D+VI+DTAGRL ID+ +M EL ++
Sbjct: 152 GGQLDVPVFNMGDSVAPPDIARAAVEKARREGNDLVIIDTAGRLHIDEELMTELHNIVET 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + TFN + +TG +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 VGPNEILLVVDSMTGQDAVNVAKTFNERLSLTGVVLTKLDGDTRGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++ LE F+PDRMA RILGMGD+L+ +EKAQ QE E++ K+I S F +
Sbjct: 272 FVGMGEKLDALEDFHPDRMADRILGMGDMLTLIEKAQANFDQEQVEKLNKRIRSMEFTLD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V +MG + +++GMIPG+G + + E +K L +EA+I +MTP ER+ P+
Sbjct: 332 DFVQQLNQVKKMGPIDQILGMIPGLGGVKKLKDLEVDDKDLVFVEAIINSMTPWERQHPQ 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 400
+ S RR+R+A+ SG + Q+V++L+ Q Q R M+ LM
Sbjct: 392 EINGS--RRRRIARGSGTSVQEVNRLLKQFEQTRKMMRQLM 430
>gi|260893271|ref|YP_003239368.1| signal recognition particle protein [Ammonifex degensii KC4]
gi|260865412|gb|ACX52518.1| signal recognition particle protein [Ammonifex degensii KC4]
Length = 445
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/403 (50%), Positives = 284/403 (70%), Gaps = 6/403 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+IR ALLEADV+ VV+ F+ + E+AVG +I+ + P Q+VKIVRDELV LMGG+
Sbjct: 33 LREIRLALLEADVNYKVVKDFIARIKERAVGQEVIQSLSPAHQVVKIVRDELVSLMGGQS 92
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A PTV++L GLQG GKTT +AKLA LKKQG+ +LVA DVYRPAA+ QL +L
Sbjct: 93 ARLNLAPKPPTVVMLVGLQGSGKTTTAAKLALSLKKQGRRPLLVAADVYRPAAVKQLQVL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV++ P +IA + EA K DVVI+DTAGRL I++ +M EL+++K
Sbjct: 153 GEQIQVPVWSRPG--NPVEIAASAMHEANHKGYDVVIIDTAGRLHINEELMQELEEIKAR 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVDAMTGQ+A + TF+ +G+ G +LTKLDGD+RGGAALS++ V+G PIK
Sbjct: 211 VKPHEVLLVVDAMTGQDAVTVAETFHQRLGLDGVVLTKLDGDTRGGAALSIRAVTGCPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQ + E A MQK+++S +F+
Sbjct: 271 FVGVGEKLDMLEPFHPDRMADRILGMGDVLTLIEKAQSTIDAEQAAAMQKRLLSDDFNLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+ R +MG + ++ ++PG G K +++ EK L +EA+I +MTPEER P
Sbjct: 331 DFLEHLRQFRKMGPLEHILSLLPGFGGVKKLKEELQFDEKELIRVEAIINSMTPEERRHP 390
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
E++ S R++R+A+ SG T Q V++L+ Q Q + ++ MG
Sbjct: 391 EIIDGS--RKRRIARGSGTTVQDVNRLLKQFEQTKKLIRQFMG 431
>gi|150004753|ref|YP_001299497.1| signal recognition protein [Bacteroides vulgatus ATCC 8482]
gi|294775183|ref|ZP_06740709.1| signal recognition particle protein [Bacteroides vulgatus PC510]
gi|319641812|ref|ZP_07996491.1| hypothetical protein HMPREF9011_02089 [Bacteroides sp. 3_1_40A]
gi|345518550|ref|ZP_08797997.1| signal recognition particle protein [Bacteroides sp. 4_3_47FAA]
gi|423312329|ref|ZP_17290266.1| signal recognition particle protein [Bacteroides vulgatus
CL09T03C04]
gi|149933177|gb|ABR39875.1| putative signal recognition protein [Bacteroides vulgatus ATCC
8482]
gi|254835935|gb|EET16244.1| signal recognition particle protein [Bacteroides sp. 4_3_47FAA]
gi|294450995|gb|EFG19469.1| signal recognition particle protein [Bacteroides vulgatus PC510]
gi|317386568|gb|EFV67468.1| hypothetical protein HMPREF9011_02089 [Bacteroides sp. 3_1_40A]
gi|392688813|gb|EIY82097.1| signal recognition particle protein [Bacteroides vulgatus
CL09T03C04]
Length = 440
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/412 (49%), Positives = 282/412 (68%), Gaps = 5/412 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKGFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTALMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ELV + RP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 AELVL-EGRPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+ VPVY+ P QIA + EAK K D+VIVDTAGRL ID+ MM+E++ +K+
Sbjct: 150 LGEQIEVPVYSELDSKNPVQIALNAIHEAKAKGYDLVIVDTAGRLAIDEQMMNEIEAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AVNPDETLFVVDSMTGQDAVNTAREFNERLDFNGVVLTKLDGDTRGGAALSIRTVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP+ER PE
Sbjct: 330 NDFLSQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPQERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
+L + RR R+A+ SG + Q+V++L+ Q Q R MK + G G +P L
Sbjct: 389 IL--NGTRRTRIAKGSGTSIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMPKL 438
>gi|418005311|ref|ZP_12645306.1| signal recognition particle, subunit Ffh [Lactobacillus casei UW1]
gi|410547240|gb|EKQ21477.1| signal recognition particle, subunit Ffh [Lactobacillus casei UW1]
Length = 478
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/416 (49%), Positives = 288/416 (69%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ F++ V +A+G L+ + P QQ++KIV DELVK MG
Sbjct: 32 MREIRLALLEADVNFDVVKTFIKNVRTKALGAELLESLTPSQQIIKIVNDELVKTMGEAA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++AGLQG GKTT KL+ YL + +L+A DVYRPAAIDQL
Sbjct: 92 VPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMDNDSARPLLIAADVYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+ELK++K
Sbjct: 152 IGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNELKNIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM +KI +FDF
Sbjct: 272 KFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMAEKIRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
NDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+ERE P
Sbjct: 332 NDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQEREDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L L
Sbjct: 392 DLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDGL 441
>gi|229545688|ref|ZP_04434413.1| signal recognition particle protein [Enterococcus faecalis TX1322]
gi|255975716|ref|ZP_05426302.1| signal recognition particle protein [Enterococcus faecalis T2]
gi|256619193|ref|ZP_05476039.1| signal recognition particle protein [Enterococcus faecalis ATCC
4200]
gi|256853255|ref|ZP_05558625.1| signal recognition particle protein [Enterococcus faecalis T8]
gi|257082423|ref|ZP_05576784.1| signal recognition particle protein [Enterococcus faecalis E1Sol]
gi|257085055|ref|ZP_05579416.1| signal recognition particle protein [Enterococcus faecalis Fly1]
gi|257090014|ref|ZP_05584375.1| signal recognition particle protein [Enterococcus faecalis CH188]
gi|257416220|ref|ZP_05593214.1| signal recognition particle protein [Enterococcus faecalis ARO1/DG]
gi|257422483|ref|ZP_05599473.1| signal recognition particle protein [Enterococcus faecalis X98]
gi|300860172|ref|ZP_07106259.1| signal recognition particle protein [Enterococcus faecalis TUSoD
Ef11]
gi|307275840|ref|ZP_07556979.1| signal recognition particle protein [Enterococcus faecalis TX2134]
gi|307289238|ref|ZP_07569194.1| signal recognition particle protein [Enterococcus faecalis TX0109]
gi|307291863|ref|ZP_07571734.1| signal recognition particle protein [Enterococcus faecalis TX0411]
gi|312901896|ref|ZP_07761161.1| signal recognition particle protein [Enterococcus faecalis TX0470]
gi|422685856|ref|ZP_16744069.1| signal recognition particle protein, partial [Enterococcus faecalis
TX4000]
gi|422689235|ref|ZP_16747347.1| signal recognition particle protein [Enterococcus faecalis TX0630]
gi|422695111|ref|ZP_16753099.1| signal recognition particle protein [Enterococcus faecalis TX4244]
gi|422699083|ref|ZP_16756956.1| signal recognition particle protein [Enterococcus faecalis TX1346]
gi|422701890|ref|ZP_16759730.1| signal recognition particle protein [Enterococcus faecalis TX1342]
gi|422704606|ref|ZP_16762416.1| signal recognition particle protein [Enterococcus faecalis TX1302]
gi|422706535|ref|ZP_16764233.1| signal recognition particle protein [Enterococcus faecalis TX0043]
gi|422720786|ref|ZP_16777395.1| signal recognition particle protein [Enterococcus faecalis TX0017]
gi|422728773|ref|ZP_16785179.1| signal recognition particle protein [Enterococcus faecalis TX0012]
gi|424761189|ref|ZP_18188771.1| signal recognition particle protein [Enterococcus faecalis R508]
gi|428767136|ref|YP_007153247.1| signal recognition particle protein [Enterococcus faecalis str.
Symbioflor 1]
gi|229309138|gb|EEN75125.1| signal recognition particle protein [Enterococcus faecalis TX1322]
gi|255968588|gb|EET99210.1| signal recognition particle protein [Enterococcus faecalis T2]
gi|256598720|gb|EEU17896.1| signal recognition particle protein [Enterococcus faecalis ATCC
4200]
gi|256711714|gb|EEU26752.1| signal recognition particle protein [Enterococcus faecalis T8]
gi|256990453|gb|EEU77755.1| signal recognition particle protein [Enterococcus faecalis E1Sol]
gi|256993085|gb|EEU80387.1| signal recognition particle protein [Enterococcus faecalis Fly1]
gi|256998826|gb|EEU85346.1| signal recognition particle protein [Enterococcus faecalis CH188]
gi|257158048|gb|EEU88008.1| signal recognition particle protein [Enterococcus faecalis ARO1/DG]
gi|257164307|gb|EEU94267.1| signal recognition particle protein [Enterococcus faecalis X98]
gi|295113085|emb|CBL31722.1| signal recognition particle subunit FFH/SRP54 (srp54) [Enterococcus
sp. 7L76]
gi|300849211|gb|EFK76961.1| signal recognition particle protein [Enterococcus faecalis TUSoD
Ef11]
gi|306497129|gb|EFM66675.1| signal recognition particle protein [Enterococcus faecalis TX0411]
gi|306499947|gb|EFM69308.1| signal recognition particle protein [Enterococcus faecalis TX0109]
gi|306507532|gb|EFM76663.1| signal recognition particle protein [Enterococcus faecalis TX2134]
gi|311291089|gb|EFQ69645.1| signal recognition particle protein [Enterococcus faecalis TX0470]
gi|315029568|gb|EFT41500.1| signal recognition particle protein [Enterococcus faecalis TX4000]
gi|315032040|gb|EFT43972.1| signal recognition particle protein [Enterococcus faecalis TX0017]
gi|315147394|gb|EFT91410.1| signal recognition particle protein [Enterococcus faecalis TX4244]
gi|315150780|gb|EFT94796.1| signal recognition particle protein [Enterococcus faecalis TX0012]
gi|315156150|gb|EFU00167.1| signal recognition particle protein [Enterococcus faecalis TX0043]
gi|315163852|gb|EFU07869.1| signal recognition particle protein [Enterococcus faecalis TX1302]
gi|315169591|gb|EFU13608.1| signal recognition particle protein [Enterococcus faecalis TX1342]
gi|315172461|gb|EFU16478.1| signal recognition particle protein [Enterococcus faecalis TX1346]
gi|315577856|gb|EFU90047.1| signal recognition particle protein [Enterococcus faecalis TX0630]
gi|402402452|gb|EJV35168.1| signal recognition particle protein [Enterococcus faecalis R508]
gi|427185309|emb|CCO72533.1| signal recognition particle protein [Enterococcus faecalis str.
Symbioflor 1]
Length = 472
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 287/401 (71%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+AVGV ++ + P QQ+VKIV +EL K +G E
Sbjct: 32 MREIRLALLEADVNLQVVKDFTKRVRERAVGVEVLESLSPAQQIVKIVDEELTKTLGSET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAIDQL +
Sbjct: 92 VELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAIDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDELK +K
Sbjct: 152 LGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V+G PI
Sbjct: 212 LANPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAALSIRAVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+ +FDF
Sbjct: 272 KFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP ERE P
Sbjct: 332 NDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 392 DLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESKKMMQQM 430
>gi|312903448|ref|ZP_07762628.1| signal recognition particle protein [Enterococcus faecalis TX0635]
gi|310633324|gb|EFQ16607.1| signal recognition particle protein [Enterococcus faecalis TX0635]
Length = 472
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/401 (50%), Positives = 287/401 (71%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+AVGV ++ + P QQ+VKIV +EL K +G E
Sbjct: 32 MREIRLALLEADVNLQVVKDFTKRVRERAVGVEVLESLSPAQQIVKIVDEELTKTLGSET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAIDQL +
Sbjct: 92 VELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAIDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDELK +K
Sbjct: 152 LGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V+G PI
Sbjct: 212 LANPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAALSIRAVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+ +FDF
Sbjct: 272 KFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP ERE P
Sbjct: 332 NDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 392 DLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKKSKKMMQQM 430
>gi|373111972|ref|ZP_09526207.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|419840623|ref|ZP_14364011.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
gi|371656540|gb|EHO21865.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|386907566|gb|EIJ72273.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
Length = 449
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/415 (47%), Positives = 298/415 (71%), Gaps = 8/415 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++ +LLEADV+ VV+ F++++ E+A+G +++G+ P QQ +K+V DELV+L+GG
Sbjct: 31 LKEVKMSLLEADVNYKVVKDFIESIREKAIGTEVLKGINPGQQFIKLVNDELVELLGGTN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A PTV++L+GLQG GKTT + KLA +LKKQ + +LVA DVYRPAAI QL +L
Sbjct: 91 ARLTKASKNPTVLMLSGLQGAGKTTFAGKLAKFLKKQNERVLLVAADVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQV V VY I ++ LE+AK+++ +I+DTAGRL ID+ +M+ELK++KR+
Sbjct: 151 GEQVEVSVYAEEGHQDVLGICERALEKAKEEHDTYMIIDTAGRLHIDETLMEELKNIKRL 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQ+A L +FN + I G +LTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 TRPQEILLVVDSMIGQDAVNLAKSFNENLSIDGVVLTKLDGDTRGGAALSIKSVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+++D+E F+PDR+ RILGMGDV+S VEKAQ +++E+A+ +++KI + FD N
Sbjct: 271 FIGVGEKLDDIELFHPDRLVSRILGMGDVVSLVEKAQSAIEEEEAKSLEEKIRTQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ + + ++GS+ ++ +IPGMG+I + AEK +K +EA+I++MT +ER+KPE+
Sbjct: 331 DFLKQLQNIKKLGSLGSILKLIPGMGQI--GDLAPAEKEMKKVEAIIQSMTKQERKKPEI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 415
L S R++R+A+ SG +++L+ Q QM+ MK + GG +P NL
Sbjct: 389 LKAS--RKQRIAKGSGTDVADINRLLKQFDQMKTMMK----MFAGGKMPNFPNLN 437
>gi|15924227|ref|NP_371761.1| signal recognition particle-like protein [Staphylococcus aureus
subsp. aureus Mu50]
gi|15926820|ref|NP_374353.1| hypothetical protein SA1080 [Staphylococcus aureus subsp. aureus
N315]
gi|148267728|ref|YP_001246671.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus JH9]
gi|150393786|ref|YP_001316461.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus JH1]
gi|156979558|ref|YP_001441817.1| signal recognition particle-like protein [Staphylococcus aureus
subsp. aureus Mu3]
gi|253315595|ref|ZP_04838808.1| signal recognition particle-like protein [Staphylococcus aureus
subsp. aureus str. CF-Marseille]
gi|255006024|ref|ZP_05144625.2| signal recognition particle-like protein [Staphylococcus aureus
subsp. aureus Mu50-omega]
gi|257795707|ref|ZP_05644686.1| signal recognition particle protein [Staphylococcus aureus A9781]
gi|258415931|ref|ZP_05682201.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A9763]
gi|258419678|ref|ZP_05682645.1| signal recognition particle protein [Staphylococcus aureus A9719]
gi|258434849|ref|ZP_05688923.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A9299]
gi|258444575|ref|ZP_05692904.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A8115]
gi|258447592|ref|ZP_05695736.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A6300]
gi|258449434|ref|ZP_05697537.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A6224]
gi|258454813|ref|ZP_05702777.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A5937]
gi|269202853|ref|YP_003282122.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ED98]
gi|282892724|ref|ZP_06300959.1| signal recognition particle protein [Staphylococcus aureus A8117]
gi|282927578|ref|ZP_06335194.1| signal recognition particle protein [Staphylococcus aureus A10102]
gi|295407176|ref|ZP_06816977.1| signal recognition particle protein [Staphylococcus aureus A8819]
gi|296274794|ref|ZP_06857301.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MR1]
gi|297245937|ref|ZP_06929796.1| signal recognition particle protein [Staphylococcus aureus A8796]
gi|384864464|ref|YP_005749823.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|387150380|ref|YP_005741944.1| Signal recognition particle, subunit Ffh SRP54 [Staphylococcus
aureus 04-02981]
gi|417651392|ref|ZP_12301155.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21172]
gi|417802688|ref|ZP_12449745.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21318]
gi|417892215|ref|ZP_12536269.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21201]
gi|418424377|ref|ZP_12997499.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS1]
gi|418427372|ref|ZP_13000384.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS2]
gi|418430213|ref|ZP_13003129.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS3a]
gi|418433178|ref|ZP_13005955.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS4]
gi|418436849|ref|ZP_13008651.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS5]
gi|418439721|ref|ZP_13011428.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS6]
gi|418442773|ref|ZP_13014375.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS7]
gi|418445832|ref|ZP_13017308.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS8]
gi|418448776|ref|ZP_13020168.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS9]
gi|418451600|ref|ZP_13022934.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS10]
gi|418454656|ref|ZP_13025918.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS11a]
gi|418457532|ref|ZP_13028735.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS11b]
gi|418569106|ref|ZP_13133446.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21272]
gi|418638085|ref|ZP_13200388.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-3]
gi|418654726|ref|ZP_13216622.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-99]
gi|418661552|ref|ZP_13223137.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-122]
gi|418878086|ref|ZP_13432321.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418880914|ref|ZP_13435133.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418883843|ref|ZP_13438038.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418886498|ref|ZP_13440646.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418894936|ref|ZP_13449031.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418914335|ref|ZP_13468307.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418920314|ref|ZP_13474247.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418931307|ref|ZP_13485148.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418991099|ref|ZP_13538760.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1096]
gi|424768079|ref|ZP_18195372.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CM05]
gi|443636824|ref|ZP_21120917.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21236]
gi|13701037|dbj|BAB42332.1| ffh [Staphylococcus aureus subsp. aureus N315]
gi|14247007|dbj|BAB57399.1| signal recognition particle homolog [Staphylococcus aureus subsp.
aureus Mu50]
gi|147740797|gb|ABQ49095.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Staphylococcus aureus subsp. aureus JH9]
gi|149946238|gb|ABR52174.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus JH1]
gi|156721693|dbj|BAF78110.1| signal recognition particle homolog [Staphylococcus aureus subsp.
aureus Mu3]
gi|257789679|gb|EEV28019.1| signal recognition particle protein [Staphylococcus aureus A9781]
gi|257839267|gb|EEV63741.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A9763]
gi|257844263|gb|EEV68645.1| signal recognition particle protein [Staphylococcus aureus A9719]
gi|257849210|gb|EEV73192.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A9299]
gi|257850068|gb|EEV74021.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A8115]
gi|257853783|gb|EEV76742.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A6300]
gi|257857422|gb|EEV80320.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A6224]
gi|257863196|gb|EEV85960.1| signal recognition particle subunit FFH/SRP54 [Staphylococcus
aureus A5937]
gi|262075143|gb|ACY11116.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ED98]
gi|282590581|gb|EFB95658.1| signal recognition particle protein [Staphylococcus aureus A10102]
gi|282764721|gb|EFC04846.1| signal recognition particle protein [Staphylococcus aureus A8117]
gi|285816919|gb|ADC37406.1| Signal recognition particle, subunit Ffh SRP54 [Staphylococcus
aureus 04-02981]
gi|294968029|gb|EFG44057.1| signal recognition particle protein [Staphylococcus aureus A8819]
gi|297177101|gb|EFH36355.1| signal recognition particle protein [Staphylococcus aureus A8796]
gi|312829631|emb|CBX34473.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|329727576|gb|EGG64032.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21172]
gi|334274324|gb|EGL92646.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21318]
gi|341858182|gb|EGS98983.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21201]
gi|371978291|gb|EHO95541.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21272]
gi|375014551|gb|EHS08232.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-99]
gi|375023309|gb|EHS16772.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-3]
gi|375038734|gb|EHS31695.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-122]
gi|377694208|gb|EHT18573.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377694742|gb|EHT19106.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377714589|gb|EHT38788.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377714930|gb|EHT39128.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377723221|gb|EHT47346.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377725451|gb|EHT49564.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377731807|gb|EHT55860.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377757837|gb|EHT81725.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377765673|gb|EHT89522.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC348]
gi|387718608|gb|EIK06566.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS3a]
gi|387718959|gb|EIK06915.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS2]
gi|387720284|gb|EIK08196.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS1]
gi|387725618|gb|EIK13222.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS4]
gi|387727953|gb|EIK15453.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS5]
gi|387730683|gb|EIK18044.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS6]
gi|387735760|gb|EIK22870.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS8]
gi|387737438|gb|EIK24504.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VRS7]
gi|387737992|gb|EIK25046.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS9]
gi|387744481|gb|EIK31245.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS10]
gi|387745771|gb|EIK32521.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS11a]
gi|387747264|gb|EIK33973.1| ffh- signal recognition particle protein [Staphylococcus aureus
subsp. aureus VRS11b]
gi|402348716|gb|EJU83695.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CM05]
gi|408423431|emb|CCJ10842.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408425421|emb|CCJ12808.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408427409|emb|CCJ14772.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408429396|emb|CCJ26561.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408431384|emb|CCJ18699.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408433378|emb|CCJ20663.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408435369|emb|CCJ22629.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|408437354|emb|CCJ24597.1| Signal recognition particle homolog [Staphylococcus aureus subsp.
aureus ST228]
gi|443406801|gb|ELS65371.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21236]
Length = 455
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R AL EADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL KLMGGE
Sbjct: 32 MREVRLALFEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|366085823|ref|ZP_09452308.1| signal recognition particle protein [Lactobacillus zeae KCTC 3804]
Length = 478
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/416 (49%), Positives = 289/416 (69%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ F++ V +AVG ++ + P QQ++KIV DELVK MG
Sbjct: 32 MREIRLALLEADVNFDVVKTFIKNVRTKAVGTEVLESLTPAQQIIKIVNDELVKTMGEAA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++AGLQG GKTT KLA YL K+ +L+A DVYRPAAIDQL
Sbjct: 92 VPLNKAPHIPTVIMMAGLQGAGKTTTVGKLAKYLMDNEKARPLLIAADVYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV+ GT+ P +I +QGL AK+ D V++DTAGRLQID+ +M+ELK++K
Sbjct: 152 IGKQLNVPVFEMGTDTDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNELKNIKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A+E+ +KI +FDF
Sbjct: 272 KFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAQEVAEKIRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
NDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+ERE P
Sbjct: 332 NDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L L
Sbjct: 392 DLL--NPSRRRRIAGGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDGL 441
>gi|15615047|ref|NP_243350.1| signal recognition particle [Bacillus halodurans C-125]
gi|10175104|dbj|BAB06203.1| signal recognition particle [Bacillus halodurans C-125]
Length = 451
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/403 (48%), Positives = 292/403 (72%), Gaps = 8/403 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F+ V E+A+G +++ + P QQ++K+V +EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIANVKEKALGQEVMKSLTPGQQVIKVVNEELTALMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTV+++ GLQG GKTT +AKLAN+L KK ++ +LVA D+YRPAAI QL
Sbjct: 92 SKIAVASKPPTVVMMVGLQGAGKTTTTAKLANHLRKKHNRNPILVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E AK+++ D V++DTAGRL ID+ +MDEL+ VK
Sbjct: 152 LGKQLNMPVFSLGDQVSPVEIAKQAIERAKEEHHDYVLIDTAGRLHIDEELMDELQQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+LLVVDAMTGQ+A + +F+ ++ ++G +LTKLDGD+RGGAALSVK V+ PI
Sbjct: 212 VAKPDEILLVVDAMTGQDAVNVAESFHEQLDVSGVVLTKLDGDTRGGAALSVKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A E++KK+ + +F F
Sbjct: 272 KFAGMGEKIDQLEPFHPERMASRILGMGDVLTLIEKAQSTVDEEKARELEKKMRTMDFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGK---ITPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V MG + ++GM+PGM K + QV EK + +EA++ +MT +E++
Sbjct: 332 DDFLEQLDQVRSMGPLDELLGMMPGMNKAKGLKNLQVD--EKQISRVEAIVRSMTKQEKQ 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
P ++ S RR+R+A+ SG Q V++L+ Q +M+ MK +
Sbjct: 390 DPSIINAS--RRRRIAKGSGTAIQDVNRLLKQFEEMKKMMKQM 430
>gi|299821777|ref|ZP_07053665.1| signal recognition particle protein [Listeria grayi DSM 20601]
gi|299817442|gb|EFI84678.1| signal recognition particle protein [Listeria grayi DSM 20601]
Length = 453
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/401 (50%), Positives = 294/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIKTVSERAVGSDVMKSLTPGQQVIKIVQEELTNLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTV+++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIAVADKPPTVLMMVGLQGAGKTTTTGKLANLLRKKYNRKPLLVAADIYRPAAIQQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ ++D VI+DTAGRL ID A+MDELK VK
Sbjct: 152 LGKQLSMPVFSLGDQVSPVEIAKQAIAKAKEDHLDYVIIDTAGRLHIDDALMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V +P E+ LVVD+MTGQ+A + +FN ++ ++G ILTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 VASPDEIFLVVDSMTGQDAVNVAESFNEQLEVSGVILTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
KLV GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E A+EM++K+ +
Sbjct: 272 KLVATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQVDIDTEKAKEMEQKLKDNSMTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q + V +MG + ++ M+PG GK+ ++ +K L +EA+I++MT E++ P
Sbjct: 332 DDFLEQLQQVKQMGPLDELMKMLPGAGKMKGMDNMQVDDKQLGHIEAIIKSMTKMEKDNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ RRKR+A+ SG+ Q+V++L+ Q +M+ MK +
Sbjct: 392 DIINAG--RRKRIARGSGRPIQEVNRLLKQFNEMKKMMKQM 430
>gi|228474956|ref|ZP_04059684.1| signal recognition particle protein [Staphylococcus hominis SK119]
gi|314936601|ref|ZP_07843948.1| signal recognition particle protein [Staphylococcus hominis subsp.
hominis C80]
gi|418620446|ref|ZP_13183250.1| signal recognition particle protein [Staphylococcus hominis VCU122]
gi|228270941|gb|EEK12329.1| signal recognition particle protein [Staphylococcus hominis SK119]
gi|313655220|gb|EFS18965.1| signal recognition particle protein [Staphylococcus hominis subsp.
hominis C80]
gi|374822576|gb|EHR86596.1| signal recognition particle protein [Staphylococcus hominis VCU122]
Length = 456
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/421 (48%), Positives = 299/421 (71%), Gaps = 4/421 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+A+G +++ + P QQ++KIV+DEL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKTVSERALGSDVMQSLTPGQQVIKIVQDELTQLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + A PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPVY+ G +VKP QI L AK++++D VI+DTAGRL ID+ +M+EL DVK
Sbjct: 152 VGKQLDVPVYSEGDQVKPQQIVDNALRYAKEEHLDFVIIDTAGRLHIDETLMNELADVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVTGVTLTKLDGDTRGGAALSIRAVTHKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+M+ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKMDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP ER+ P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPNERQDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDAL 418
+L S R+KR+A+ SG++ Q+V++L+ Q M+ MK G G S +E+ L
Sbjct: 392 AILNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGNGRKGKKGKRSQMENML 449
Query: 419 K 419
K
Sbjct: 450 K 450
>gi|312622773|ref|YP_004024386.1| signal recognition particle protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203240|gb|ADQ46567.1| signal recognition particle protein [Caldicellulosiruptor
kronotskyensis 2002]
Length = 443
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/399 (49%), Positives = 279/399 (69%), Gaps = 2/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++++ ALLEADV+ VV+ F+ V+++AVG ++ + P QQ++KIV DE+V L+GG
Sbjct: 31 MKEVKLALLEADVNYKVVKDFINTVTQKAVGEEVLESLTPAQQVIKIVYDEMVNLLGGSD 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L F+ S ++ +L GLQG GKTT + KLA LK+QGK+ +LVA D+YRPAAI QL I+
Sbjct: 91 TKLAFSPSGFSIYMLVGLQGSGKTTTAGKLAGLLKRQGKNPLLVACDIYRPAAIKQLEIV 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
++VGV + +IAK+G+E AK DV IVDTAGRL I++ +MDEL +K
Sbjct: 151 AQKVGVKCFADYNSKDAVKIAKEGIEFAKASRCDVAIVDTAGRLHINQELMDELVAIKNA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ PTE+LLV+DAMTGQ+A + FN ++GI G I+TKLDGD+RGGAALSVK ++GKPIK
Sbjct: 211 IKPTEILLVLDAMTGQDAVNVAAAFNEQLGIDGIIMTKLDGDTRGGAALSVKAITGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+MEDLE F+PDRMA RILGMGD+L+ +EKAQE + Q+ AEE++KK+ S F
Sbjct: 271 FAGVGEKMEDLEAFHPDRMASRILGMGDILTLIEKAQEAIDQKKAEELEKKLRSMQFTLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +MT EER+ P +
Sbjct: 331 DFLDQLKQIKKMGPLSQIISMIPGVKLKGDVDFDAGEKELKKIEAIINSMTKEERQDPSI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 391 INSS--RKRRIAMGSGTTVQDVNRLLRQFEDMKRMMKQF 427
>gi|253731855|ref|ZP_04866020.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253724407|gb|EES93136.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus USA300_TCH959]
Length = 455
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTQLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|423452854|ref|ZP_17429707.1| signal recognition particle protein [Bacillus cereus BAG5X1-1]
gi|423470059|ref|ZP_17446803.1| signal recognition particle protein [Bacillus cereus BAG6O-2]
gi|423483435|ref|ZP_17460125.1| signal recognition particle protein [Bacillus cereus BAG6X1-2]
gi|423522325|ref|ZP_17498798.1| signal recognition particle protein [Bacillus cereus HuA4-10]
gi|423558592|ref|ZP_17534894.1| signal recognition particle protein [Bacillus cereus MC67]
gi|401139413|gb|EJQ46975.1| signal recognition particle protein [Bacillus cereus BAG5X1-1]
gi|401140986|gb|EJQ48541.1| signal recognition particle protein [Bacillus cereus BAG6X1-2]
gi|401175019|gb|EJQ82222.1| signal recognition particle protein [Bacillus cereus HuA4-10]
gi|401191860|gb|EJQ98882.1| signal recognition particle protein [Bacillus cereus MC67]
gi|402437311|gb|EJV69335.1| signal recognition particle protein [Bacillus cereus BAG6O-2]
Length = 449
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/406 (49%), Positives = 294/406 (72%), Gaps = 8/406 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+AVG +++ + P QQ++KIV++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFIKRVSERAVGQDVMKSLTPGQQVIKIVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDELAKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKVERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 390 QPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|288553090|ref|YP_003425025.1| signal recognition particle protein [Bacillus pseudofirmus OF4]
gi|288544250|gb|ADC48133.1| signal recognition particle [Bacillus pseudofirmus OF4]
Length = 452
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 290/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F+ +V E+A+G +++ + P Q ++K+V +EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIASVKEKALGQEVMKSLTPGQMVIKVVNEELTALMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTV+++ GLQG GKTT +AKLAN+L KKQ ++ MLVA D+YRPAAI QL
Sbjct: 92 SKIAVANKPPTVVMMVGLQGAGKTTTTAKLANHLRKKQNRTPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +M EL++VK
Sbjct: 152 LGKQLNMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMGELQEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAA+SVK V+ PI
Sbjct: 212 IAKPDEILLVVDAMTGQDAVNVAESFNEQLDVTGVVLTKLDGDTRGGAAISVKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPFYPDRMA RILGMGD+L+ +EKAQ + +E A E++KK+ + +F F
Sbjct: 272 KFAGMGEKIDQLEPFYPDRMASRILGMGDMLTLIEKAQSNVDEEKARELEKKMRTMDFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + ++ M+PGM K + ++ +K L +EA++ +MT E++ P
Sbjct: 332 DDFLEQLDQVKSMGPLDEILNMMPGMNKAKGLKDLKVDDKQLVRVEAIVRSMTKAEKQDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
L+ S RR+R+A+ SG T Q V++L+ Q M+ MK +
Sbjct: 392 SLMNAS--RRRRIAKGSGTTIQDVNRLLKQFEDMKKMMKQM 430
>gi|423395854|ref|ZP_17373055.1| signal recognition particle protein [Bacillus cereus BAG2X1-1]
gi|423406730|ref|ZP_17383879.1| signal recognition particle protein [Bacillus cereus BAG2X1-3]
gi|401653596|gb|EJS71140.1| signal recognition particle protein [Bacillus cereus BAG2X1-1]
gi|401660020|gb|EJS77503.1| signal recognition particle protein [Bacillus cereus BAG2X1-3]
Length = 449
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/406 (49%), Positives = 294/406 (72%), Gaps = 8/406 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+AVG +++ + P QQ++KIV++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFIKRVSERAVGQDVMKSLTPGQQVIKIVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDELAKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 IAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKLERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 390 QPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|260912277|ref|ZP_05918828.1| signal recognition particle protein Ffh [Prevotella sp. oral taxon
472 str. F0295]
gi|260633578|gb|EEX51717.1| signal recognition particle protein Ffh [Prevotella sp. oral taxon
472 str. F0295]
Length = 450
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/428 (49%), Positives = 291/428 (67%), Gaps = 13/428 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKTFTDTVKQKALGMNVLTAVKPGQLMVKIVHDELATLMGGES 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L K+RP +IL++GLQG GKTT S KLAN LK KQ K+ +LVA DVYRPAAI+QL +
Sbjct: 91 VGLQL-KNRPAIILMSGLQGSGKTTFSGKLANLLKSKQHKNPLLVACDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ +QVGV VY+ +IA + EAK K DVVIVDTAGRL +D+ MMDE+ +K+
Sbjct: 150 VAQQVGVSVYSEPDNKNVVEIANNAIREAKSKGNDVVIVDTAGRLAVDEEMMDEIYRLKQ 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
LNP E L VVD+MTGQ+A FN + I G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 ALNPDETLFVVDSMTGQDAVNTAREFNDRLDIDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME ++ F+P+RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKMEAIDVFHPERMADRILGMGDIVSLVERAQEQFDEEEAKRLQKKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFLKQ + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFLKQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFKGIEAIIKSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALK 419
+L S RR+R+A+ SG Q+V++L+ Q Q R MK +M G ++ ++ +
Sbjct: 389 ILNNS--RRQRIAKGSGTNIQEVNKLIKQFDQTRKMMK----MMTGTNMAKMA----GMA 438
Query: 420 SEQKAPPG 427
S+ K PG
Sbjct: 439 SKMKGMPG 446
>gi|417887086|ref|ZP_12531225.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21195]
gi|341858508|gb|EGS99298.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21195]
Length = 455
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL KLMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A+ ++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKYLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|415691086|ref|ZP_11453325.1| hypothetical protein CGSSa03_05784 [Staphylococcus aureus subsp.
aureus CGS03]
gi|315131030|gb|EFT87014.1| hypothetical protein CGSSa03_05784 [Staphylococcus aureus subsp.
aureus CGS03]
Length = 455
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R AL EADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL KLMGGE
Sbjct: 32 MREVRLALFEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRVSSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|30021933|ref|NP_833564.1| signal recognition particle protein [Bacillus cereus ATCC 14579]
gi|218235010|ref|YP_002368646.1| signal recognition particle protein [Bacillus cereus B4264]
gi|218898998|ref|YP_002447409.1| signal recognition particle protein [Bacillus cereus G9842]
gi|228902348|ref|ZP_04066505.1| Signal recognition particle protein [Bacillus thuringiensis IBL
4222]
gi|228909670|ref|ZP_04073493.1| Signal recognition particle protein [Bacillus thuringiensis IBL
200]
gi|228922599|ref|ZP_04085899.1| Signal recognition particle protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228940933|ref|ZP_04103492.1| Signal recognition particle protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228954121|ref|ZP_04116150.1| Signal recognition particle protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228960061|ref|ZP_04121725.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228973862|ref|ZP_04134438.1| Signal recognition particle protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980452|ref|ZP_04140762.1| Signal recognition particle protein [Bacillus thuringiensis Bt407]
gi|229071343|ref|ZP_04204566.1| Signal recognition particle protein [Bacillus cereus F65185]
gi|229111316|ref|ZP_04240869.1| Signal recognition particle protein [Bacillus cereus Rock1-15]
gi|229129121|ref|ZP_04258094.1| Signal recognition particle protein [Bacillus cereus BDRD-Cer4]
gi|229152044|ref|ZP_04280239.1| Signal recognition particle protein [Bacillus cereus m1550]
gi|229162781|ref|ZP_04290738.1| Signal recognition particle protein [Bacillus cereus R309803]
gi|229180121|ref|ZP_04307465.1| Signal recognition particle protein [Bacillus cereus 172560W]
gi|365159378|ref|ZP_09355559.1| signal recognition particle protein [Bacillus sp. 7_6_55CFAA_CT2]
gi|384187905|ref|YP_005573801.1| signal recognition particle protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|402558829|ref|YP_006601553.1| signal recognition particle protein [Bacillus thuringiensis HD-771]
gi|410676219|ref|YP_006928590.1| signal recognition particle protein Ffh [Bacillus thuringiensis
Bt407]
gi|423359119|ref|ZP_17336622.1| signal recognition particle protein [Bacillus cereus VD022]
gi|423385348|ref|ZP_17362604.1| signal recognition particle protein [Bacillus cereus BAG1X1-2]
gi|423412350|ref|ZP_17389470.1| signal recognition particle protein [Bacillus cereus BAG3O-2]
gi|423425981|ref|ZP_17403012.1| signal recognition particle protein [Bacillus cereus BAG3X2-2]
gi|423431865|ref|ZP_17408869.1| signal recognition particle protein [Bacillus cereus BAG4O-1]
gi|423437300|ref|ZP_17414281.1| signal recognition particle protein [Bacillus cereus BAG4X12-1]
gi|423503478|ref|ZP_17480070.1| signal recognition particle protein [Bacillus cereus HD73]
gi|423528294|ref|ZP_17504739.1| signal recognition particle protein [Bacillus cereus HuB1-1]
gi|423561749|ref|ZP_17538025.1| signal recognition particle protein [Bacillus cereus MSX-A1]
gi|423582055|ref|ZP_17558166.1| signal recognition particle protein [Bacillus cereus VD014]
gi|423585746|ref|ZP_17561833.1| signal recognition particle protein [Bacillus cereus VD045]
gi|423628938|ref|ZP_17604687.1| signal recognition particle protein [Bacillus cereus VD154]
gi|423635384|ref|ZP_17611037.1| signal recognition particle protein [Bacillus cereus VD156]
gi|423641074|ref|ZP_17616692.1| signal recognition particle protein [Bacillus cereus VD166]
gi|423649708|ref|ZP_17625278.1| signal recognition particle protein [Bacillus cereus VD169]
gi|423656704|ref|ZP_17632003.1| signal recognition particle protein [Bacillus cereus VD200]
gi|434376948|ref|YP_006611592.1| signal recognition particle protein [Bacillus thuringiensis HD-789]
gi|449090786|ref|YP_007423227.1| signal recognition particle protein [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452200284|ref|YP_007480365.1| Signal recognition particle, subunit Ffh SRP54 [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|29897489|gb|AAP10765.1| Signal recognition particle, subunit Ffh/SRP54 [Bacillus cereus
ATCC 14579]
gi|218162967|gb|ACK62959.1| signal recognition particle protein [Bacillus cereus B4264]
gi|218540894|gb|ACK93288.1| signal recognition particle protein [Bacillus cereus G9842]
gi|228603330|gb|EEK60807.1| Signal recognition particle protein [Bacillus cereus 172560W]
gi|228620663|gb|EEK77532.1| Signal recognition particle protein [Bacillus cereus R309803]
gi|228631393|gb|EEK88027.1| Signal recognition particle protein [Bacillus cereus m1550]
gi|228654358|gb|EEL10223.1| Signal recognition particle protein [Bacillus cereus BDRD-Cer4]
gi|228672092|gb|EEL27383.1| Signal recognition particle protein [Bacillus cereus Rock1-15]
gi|228711797|gb|EEL63749.1| Signal recognition particle protein [Bacillus cereus F65185]
gi|228779272|gb|EEM27529.1| Signal recognition particle protein [Bacillus thuringiensis Bt407]
gi|228785887|gb|EEM33890.1| Signal recognition particle protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228799577|gb|EEM46530.1| Signal recognition particle protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228805687|gb|EEM52277.1| Signal recognition particle protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228818769|gb|EEM64835.1| Signal recognition particle protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228837028|gb|EEM82369.1| Signal recognition particle protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228849959|gb|EEM94790.1| Signal recognition particle protein [Bacillus thuringiensis IBL
200]
gi|228857317|gb|EEN01820.1| Signal recognition particle protein [Bacillus thuringiensis IBL
4222]
gi|326941614|gb|AEA17510.1| signal recognition particle protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|363625376|gb|EHL76417.1| signal recognition particle protein [Bacillus sp. 7_6_55CFAA_CT2]
gi|401084991|gb|EJP93237.1| signal recognition particle protein [Bacillus cereus VD022]
gi|401104418|gb|EJQ12395.1| signal recognition particle protein [Bacillus cereus BAG3O-2]
gi|401110728|gb|EJQ18627.1| signal recognition particle protein [Bacillus cereus BAG3X2-2]
gi|401116621|gb|EJQ24459.1| signal recognition particle protein [Bacillus cereus BAG4O-1]
gi|401120455|gb|EJQ28251.1| signal recognition particle protein [Bacillus cereus BAG4X12-1]
gi|401202006|gb|EJR08871.1| signal recognition particle protein [Bacillus cereus MSX-A1]
gi|401212934|gb|EJR19675.1| signal recognition particle protein [Bacillus cereus VD014]
gi|401233092|gb|EJR39588.1| signal recognition particle protein [Bacillus cereus VD045]
gi|401268483|gb|EJR74531.1| signal recognition particle protein [Bacillus cereus VD154]
gi|401278135|gb|EJR84071.1| signal recognition particle protein [Bacillus cereus VD156]
gi|401280135|gb|EJR86057.1| signal recognition particle protein [Bacillus cereus VD166]
gi|401282988|gb|EJR88885.1| signal recognition particle protein [Bacillus cereus VD169]
gi|401290445|gb|EJR96139.1| signal recognition particle protein [Bacillus cereus VD200]
gi|401635404|gb|EJS53159.1| signal recognition particle protein [Bacillus cereus BAG1X1-2]
gi|401787481|gb|AFQ13520.1| signal recognition particle protein [Bacillus thuringiensis HD-771]
gi|401875505|gb|AFQ27672.1| signal recognition particle protein [Bacillus thuringiensis HD-789]
gi|402451957|gb|EJV83776.1| signal recognition particle protein [Bacillus cereus HuB1-1]
gi|402458832|gb|EJV90572.1| signal recognition particle protein [Bacillus cereus HD73]
gi|409175348|gb|AFV19653.1| signal recognition particle protein Ffh [Bacillus thuringiensis
Bt407]
gi|449024543|gb|AGE79706.1| signal recognition particle protein [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452105677|gb|AGG02617.1| Signal recognition particle, subunit Ffh SRP54 [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 449
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/406 (49%), Positives = 294/406 (72%), Gaps = 8/406 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVSERAVGQDVMKSLTPGQQVIKVVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDELAKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKLERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 390 QPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|257427951|ref|ZP_05604349.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 65-1322]
gi|293501045|ref|ZP_06666896.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 58-424]
gi|257274792|gb|EEV06279.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 65-1322]
gi|291096050|gb|EFE26311.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 58-424]
Length = 455
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL KLMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGG ALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGVALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKELDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|335357213|ref|ZP_08549083.1| Signal recognition particle protein [Lactobacillus animalis KCTC
3501]
Length = 475
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/417 (49%), Positives = 290/417 (69%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLE+DV+ VV+ FV+ V +AVG ++ + P QQ+VKIV +ELVK+MG E
Sbjct: 32 MREIRLALLESDVNFKVVKDFVKTVRTRAVGAEVLESLTPAQQIVKIVNEELVKVMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ L + PTVI++ GLQG GKTT + K+A LK +Q +++A DVYRPAA+DQL
Sbjct: 92 TPLNKSPKIPTVIMMVGLQGAGKTTTAGKMAKRLKDEQNARPLMIAADVYRPAAVDQLKT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G ++ VPV+ GT+V P QI KQG+E AK+K D VI+DTAGRLQID+ +MDEL ++K
Sbjct: 152 IGRELDVPVFEMGTDVDPVQIVKQGMELAKEKKNDYVIIDTAGRLQIDERLMDELVNIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAQPNEILLTVDAMTGQNAVEVAQGFNDQLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M L+ FYPDRMA RILGMGD+L+ +EKAQ+ ++ AEE+ K+ +FDF
Sbjct: 272 KFIGQGEKMTALDVFYPDRMASRILGMGDMLTLIEKAQKDFDEKKAEELADKMRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q V MG + ++ MIPGM PA ++ K ++ +A++ +MTP+ERE
Sbjct: 332 NDFLDQLEQVQNMGPIEDIMKMIPGMAN-NPALKNIKVDPKDMEHTKAIVYSMTPQERED 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+LL +P RR+R+A SG+ Q+V++++ Q QMR ++M M G+ + L
Sbjct: 391 PDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMR----DMMQKMSKGNFSGMEGL 441
>gi|282920020|ref|ZP_06327749.1| signal recognition particle protein [Staphylococcus aureus A9765]
gi|418286466|ref|ZP_12899112.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21209]
gi|418579068|ref|ZP_13143163.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418903446|ref|ZP_13457487.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418925470|ref|ZP_13479372.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418928494|ref|ZP_13482380.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1612]
gi|282594736|gb|EFB99720.1| signal recognition particle protein [Staphylococcus aureus A9765]
gi|365167174|gb|EHM58650.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21209]
gi|377697095|gb|EHT21450.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377738406|gb|EHT62415.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377742461|gb|EHT66446.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377744539|gb|EHT68516.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG2018]
Length = 455
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTQLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|229047532|ref|ZP_04193122.1| Signal recognition particle protein [Bacillus cereus AH676]
gi|229081100|ref|ZP_04213610.1| Signal recognition particle protein [Bacillus cereus Rock4-2]
gi|229146416|ref|ZP_04274787.1| Signal recognition particle protein [Bacillus cereus BDRD-ST24]
gi|229192014|ref|ZP_04318984.1| Signal recognition particle protein [Bacillus cereus ATCC 10876]
gi|228591565|gb|EEK49414.1| Signal recognition particle protein [Bacillus cereus ATCC 10876]
gi|228637049|gb|EEK93508.1| Signal recognition particle protein [Bacillus cereus BDRD-ST24]
gi|228702144|gb|EEL54620.1| Signal recognition particle protein [Bacillus cereus Rock4-2]
gi|228723779|gb|EEL75134.1| Signal recognition particle protein [Bacillus cereus AH676]
Length = 436
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/406 (49%), Positives = 294/406 (72%), Gaps = 8/406 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 19 MREVRLALLEADVNFKVVKDFVKRVSERAVGQDVMKSLTPGQQVIKVVQEELTELMGGEQ 78
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 79 SKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 138
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL VK
Sbjct: 139 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDELAKVKE 198
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 199 VAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 258
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 259 KFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 318
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 319 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKLERE 376
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 377 QPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 420
>gi|377809757|ref|YP_005004978.1| signal recognition particle protein [Pediococcus claussenii ATCC
BAA-344]
gi|361056498|gb|AEV95302.1| signal recognition particle protein [Pediococcus claussenii ATCC
BAA-344]
Length = 476
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/417 (49%), Positives = 286/417 (68%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV++FV+ V +QAVG ++ G+ P QQ++K+V DELVK MG E
Sbjct: 32 MREIRLALLEADVNFQVVKQFVKTVRDQAVGSDVLDGLNPAQQIIKLVNDELVKTMGSED 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ L + PT+I++ GLQG GKTT + KLA LK +Q +L+A DVYRPAA+DQLV
Sbjct: 92 APLNKSDHIPTIIMMTGLQGAGKTTTTGKLALKLKNEQNARPLLIAADVYRPAAVDQLVQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+++ VPVY GT P I K+GLE A++ + D V +DTAGRLQID+A+M EL D+K
Sbjct: 152 VGQRIDVPVYEEGTSANPVDIVKRGLEVARENHNDYVFIDTAGRLQIDEALMQELADIKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LLVVDAMTGQ A FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAHPDEILLVVDAMTGQNAVNTAEGFNEKLDITGIVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
KLVG+GE+MEDL+ F+PDRMA RILGMGD+L+ +EK Q + ++ A EM KI FDF
Sbjct: 272 KLVGQGEKMEDLDVFHPDRMASRILGMGDMLTLIEKTQRDVDEKQAAEMADKIRENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q V MG M ++ MIPGM PA + K ++ +A+I +MT ERE
Sbjct: 332 NDFVDQLVQVQNMGPMEDIMKMIPGMAN-NPAMKNMNVNPKDIEHTKAIIYSMTAAERED 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P++L +P RR+R+A SG+ +V++++ Q Q MK +M M G+ + +
Sbjct: 391 PDIL--NPSRRRRIAAGSGQPVVEVNRMIKQFNQ----MKKMMNQMSKGNFNGMEGM 441
>gi|306825356|ref|ZP_07458696.1| signal recognition particle protein [Streptococcus sp. oral taxon
071 str. 73H25AP]
gi|304432294|gb|EFM35270.1| signal recognition particle protein [Streptococcus sp. oral taxon
071 str. 73H25AP]
Length = 523
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHDVIDTLNPAQQIIKIVDEELTAILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|30263848|ref|NP_846225.1| signal recognition particle protein [Bacillus anthracis str. Ames]
gi|47529273|ref|YP_020622.1| signal recognition particle protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186695|ref|YP_029947.1| signal recognition particle protein [Bacillus anthracis str.
Sterne]
gi|227813247|ref|YP_002813256.1| signal recognition particle protein [Bacillus anthracis str. CDC
684]
gi|229602210|ref|YP_002868082.1| signal recognition particle protein [Bacillus anthracis str. A0248]
gi|254683447|ref|ZP_05147307.1| signal recognition particle protein [Bacillus anthracis str.
CNEVA-9066]
gi|254721376|ref|ZP_05183165.1| signal recognition particle protein [Bacillus anthracis str. A1055]
gi|254735883|ref|ZP_05193589.1| signal recognition particle protein [Bacillus anthracis str.
Western North America USA6153]
gi|254739516|ref|ZP_05197213.1| signal recognition particle protein [Bacillus anthracis str. Kruger
B]
gi|254751176|ref|ZP_05203215.1| signal recognition particle protein [Bacillus anthracis str.
Vollum]
gi|254756724|ref|ZP_05208753.1| signal recognition particle protein [Bacillus anthracis str.
Australia 94]
gi|386737667|ref|YP_006210848.1| Signal recognition particle protein [Bacillus anthracis str. H9401]
gi|421639600|ref|ZP_16080191.1| signal recognition particle protein [Bacillus anthracis str. BF1]
gi|30258492|gb|AAP27711.1| signal recognition particle protein [Bacillus anthracis str. Ames]
gi|47504421|gb|AAT33097.1| signal recognition particle protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180622|gb|AAT55998.1| signal recognition particle protein [Bacillus anthracis str.
Sterne]
gi|227003495|gb|ACP13238.1| signal recognition particle protein [Bacillus anthracis str. CDC
684]
gi|229266618|gb|ACQ48255.1| signal recognition particle protein [Bacillus anthracis str. A0248]
gi|384387519|gb|AFH85180.1| Signal recognition particle protein [Bacillus anthracis str. H9401]
gi|403393265|gb|EJY90510.1| signal recognition particle protein [Bacillus anthracis str. BF1]
Length = 449
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/406 (49%), Positives = 293/406 (72%), Gaps = 8/406 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVSERAVGQDVMKSLTPGQQVIKVVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAIANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAG L ID+ +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGHLHIDEELMDELAKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKLERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 390 QPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|418642709|ref|ZP_13204895.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-24]
gi|375015822|gb|EHS09466.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-24]
Length = 455
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTQLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSMNMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|418002277|ref|ZP_12642398.1| signal recognition particle, subunit Ffh [Lactobacillus casei
UCD174]
gi|410544439|gb|EKQ18765.1| signal recognition particle, subunit Ffh [Lactobacillus casei
UCD174]
Length = 478
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/416 (48%), Positives = 288/416 (69%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ F++ V +A+G ++ + P QQ++KIV DELVK MG
Sbjct: 32 MREIRLALLEADVNFDVVKTFIKNVRTKALGAEVLESLTPSQQIIKIVNDELVKTMGEAA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++AGLQG GKTT KL+ YL + +L+A DVYRPAAIDQL
Sbjct: 92 VPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMDNDSARLLLIAADVYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+ELK++K
Sbjct: 152 IGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNELKNIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM +KI +FDF
Sbjct: 272 KFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMAEKIRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
NDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+ERE P
Sbjct: 332 NDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQEREDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L L
Sbjct: 392 DLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDGL 441
>gi|340754763|ref|ZP_08691499.1| signal recognition particle protein [Fusobacterium sp. D12]
gi|421499991|ref|ZP_15947014.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
gi|313685772|gb|EFS22607.1| signal recognition particle protein [Fusobacterium sp. D12]
gi|402269092|gb|EJU18438.1| signal recognition particle protein [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
Length = 449
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/415 (47%), Positives = 298/415 (71%), Gaps = 8/415 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++ +LLEADV+ VV+ F++++ E+A+G +++G+ P QQ +K+V DEL++L+GG
Sbjct: 31 LKEVKMSLLEADVNYKVVKDFIESIREKAIGTEVLKGINPGQQFIKLVNDELIELLGGTN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L A PTV++L+GLQG GKTT + KLA +LKKQ + +LVA DVYRPAAI QL +L
Sbjct: 91 ARLTKASKNPTVLMLSGLQGAGKTTFAGKLAKFLKKQNERVLLVAADVYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQV V VY I ++ LE+AK+++ +I+DTAGRL ID+ +M+ELK++KR+
Sbjct: 151 GEQVEVSVYAEEGHQDVLGICERALEKAKEEHDTYMIIDTAGRLHIDETLMEELKNIKRL 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQ+A L +FN + I G +LTKLDGD+RGGAALS+K V GKPIK
Sbjct: 211 TRPQEILLVVDSMIGQDAVNLAKSFNENLSIDGVVLTKLDGDTRGGAALSIKSVVGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+++D+E F+PDR+ RILGMGDV+S VEKAQ +++E+A+ +++KI + FD N
Sbjct: 271 FIGVGEKLDDIELFHPDRLVSRILGMGDVVSLVEKAQSAIEEEEAKSLEEKIRTQKFDLN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ + + ++GS+ ++ +IPGMG+I + AEK +K +EA+I++MT +ER+KPE+
Sbjct: 331 DFLKQLQNIKKLGSLGSILKLIPGMGQI--GDLAPAEKEMKKVEAIIQSMTKQERKKPEI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 415
L S R++R+A+ SG +++L+ Q QM+ MK + GG +P NL
Sbjct: 389 LKAS--RKQRIAKGSGTDVADINRLLKQFDQMKTMMK----MFAGGKMPNFPNLN 437
>gi|347542415|ref|YP_004857052.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346985451|dbj|BAK81126.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 454
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/406 (46%), Positives = 287/406 (70%), Gaps = 4/406 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLE+DV+ VV+ F+ VSE+++G ++ + P QQ++KIV DEL +MG +
Sbjct: 32 MREVKLALLESDVNYKVVKTFISRVSEKSLGKEVLESLTPAQQVIKIVNDELKSIMGNDQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L + + TVI+L GLQG GKTT++AKL+ Y +K GKS +++A DVYRPAA+ QL +L
Sbjct: 92 SKLNYNSNSTTVIMLVGLQGAGKTTMAAKLSLYCRKSGKSPLMIACDVYRPAAVKQLEVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ +PV++ P I ++GLE+A+ +VVI+DTAGRL ID +MDEL+++K +
Sbjct: 152 GNQIDIPVFSIPDSKDPLNIVRKGLEKAESNMNNVVIIDTAGRLHIDDNLMDELREIKEI 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP+E+L+V+D+M GQE+ + TFN ++ +TG +LTKLDGD+RGG ALS+KEV GK IK
Sbjct: 212 SNPSEILMVIDSMIGQESVNIAETFNEKLDVTGFVLTKLDGDTRGGVALSIKEVIGKNIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ DLE F+PDRMA RILGMGDVLS +EKAQE + QE+A+++ +++ + F+F
Sbjct: 272 FIGVGEKISDLEVFHPDRMASRILGMGDVLSLIEKAQESIDQEEAQKLSERMFANEFNFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEAMIEAMTPEERE 356
DF + ++GS S+++ MIPG+G ++ + ++EK L +EA+I +MT +ER+
Sbjct: 332 DFKSAMHQMKKLGSFSKILQMIPGIGNAMKELKNINLDDSEKELSKIEAIINSMTAKERK 391
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
P+LL S R+ R+A+ SG T QV++L+ M MK G+
Sbjct: 392 NPKLLIGSASRKSRIAKGSGSTTAQVNKLIKDFENMSKMMKQFKGM 437
>gi|313888484|ref|ZP_07822151.1| signal recognition particle protein [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845513|gb|EFR32907.1| signal recognition particle protein [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 445
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/399 (50%), Positives = 278/399 (69%), Gaps = 3/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ FV+ V E+A+G ++ + P QQ++KIV +EL LMG
Sbjct: 32 MREVKLALLEADVNFRVVKDFVKTVKERALGKEVLESLTPGQQVIKIVNEELTSLMGTSE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++ F+K +PTVI++ GLQG GKTT S KLAN LKK GK +LVA DVYRPAAI QL ++
Sbjct: 92 VKIDFSK-KPTVIMMCGLQGAGKTTTSGKLANKLKKDGKRPLLVACDVYRPAAIKQLQVV 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE V PV+T G ++ P I+K LE AKK DVVI+DTAGRL ID+A+M EL+D+
Sbjct: 151 GESVDTPVFTMGDKISPVDISKAALEHAKKNGNDVVIIDTAGRLHIDEALMKELQDIHEA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
L P+EVLLV+DAMTGQ+A + TF+ + +TG ILTKLDGD+RGGAALS++ V+ PIK
Sbjct: 211 LEPSEVLLVLDAMTGQDAVNVADTFDDMLKLTGVILTKLDGDARGGAALSIRSVTDVPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+ GE+M+++E F+PDRMA RILGMGDVLS +EKAQ + + A+E+++K+ + F F
Sbjct: 271 FIASGEKMDNIEVFHPDRMASRILGMGDVLSLIEKAQSAVDDKKAKELEEKLRKSTFTFE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + MG + +IGMIPGM + + +EA+I +MT +ER+KPE+
Sbjct: 331 DFLDQMQQMKNMGPLEDIIGMIPGMNSKALKGISLPDNEFAKVEAIILSMTKKERQKPEI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S RRKR+A+ SG + V++L+ Q MR MK
Sbjct: 391 IDSS--RRKRIAKGSGTSPADVNKLIKQFKDMRKMMKQF 427
>gi|21282849|ref|NP_645937.1| hypothetical protein MW1120 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486076|ref|YP_043297.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57651806|ref|YP_186112.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus COL]
gi|87161356|ref|YP_493827.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88194944|ref|YP_499744.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221359|ref|YP_001332181.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|221142027|ref|ZP_03566520.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253733525|ref|ZP_04867690.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH130]
gi|258452535|ref|ZP_05700541.1| signal recognition particle protein [Staphylococcus aureus A5948]
gi|262048135|ref|ZP_06021022.1| hypothetical protein SAD30_1911 [Staphylococcus aureus D30]
gi|262051866|ref|ZP_06024082.1| hypothetical protein SA930_1416 [Staphylococcus aureus 930918-3]
gi|284024161|ref|ZP_06378559.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 132]
gi|294848231|ref|ZP_06788978.1| signal recognition particle protein [Staphylococcus aureus A9754]
gi|297208119|ref|ZP_06924550.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300912199|ref|ZP_07129642.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH70]
gi|304381199|ref|ZP_07363852.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379014428|ref|YP_005290664.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VC40]
gi|384861831|ref|YP_005744551.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|384869771|ref|YP_005752485.1| Signal recognition particle protein [Staphylococcus aureus subsp.
aureus T0131]
gi|385781465|ref|YP_005757636.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 11819-97]
gi|387142846|ref|YP_005731239.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TW20]
gi|415686426|ref|ZP_11450515.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CGS01]
gi|417650106|ref|ZP_12299883.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21189]
gi|417653191|ref|ZP_12302925.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21193]
gi|417797221|ref|ZP_12444419.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21305]
gi|417899954|ref|ZP_12543853.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21259]
gi|418281348|ref|ZP_12894159.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21178]
gi|418312566|ref|ZP_12924075.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21334]
gi|418316118|ref|ZP_12927562.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21340]
gi|418317672|ref|ZP_12929088.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21232]
gi|418321833|ref|ZP_12933172.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VCU006]
gi|418570822|ref|ZP_13135083.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21283]
gi|418572240|ref|ZP_13136452.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21333]
gi|418647521|ref|ZP_13209585.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-88]
gi|418649610|ref|ZP_13211638.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-91]
gi|418658938|ref|ZP_13220635.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-111]
gi|418873564|ref|ZP_13427859.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-125]
gi|418875172|ref|ZP_13429432.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC93]
gi|418911844|ref|ZP_13465827.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG547]
gi|418934139|ref|ZP_13487962.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418946951|ref|ZP_13499350.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-157]
gi|418955426|ref|ZP_13507366.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-189]
gi|418988058|ref|ZP_13535731.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1835]
gi|419774283|ref|ZP_14300253.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CO-23]
gi|421150123|ref|ZP_15609779.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|422742354|ref|ZP_16796360.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422745532|ref|ZP_16799471.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA131]
gi|424785067|ref|ZP_18211870.1| SRP54 subunit [Staphylococcus aureus CN79]
gi|440705976|ref|ZP_20886725.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21282]
gi|440734683|ref|ZP_20914295.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|443639581|ref|ZP_21123587.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21196]
gi|448742257|ref|ZP_21724207.1| signal recognition particle protein [Staphylococcus aureus
KT/314250]
gi|448744055|ref|ZP_21725959.1| signal recognition particle protein [Staphylococcus aureus KT/Y21]
gi|21204288|dbj|BAB94985.1| ffh [Staphylococcus aureus subsp. aureus MW2]
gi|49244519|emb|CAG42948.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57285992|gb|AAW38086.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus COL]
gi|87127330|gb|ABD21844.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87202502|gb|ABD30312.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150374159|dbj|BAF67419.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|253728579|gb|EES97308.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH130]
gi|257859753|gb|EEV82595.1| signal recognition particle protein [Staphylococcus aureus A5948]
gi|259160267|gb|EEW45295.1| hypothetical protein SA930_1416 [Staphylococcus aureus 930918-3]
gi|259163701|gb|EEW48256.1| hypothetical protein SAD30_1911 [Staphylococcus aureus D30]
gi|269940729|emb|CBI49110.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TW20]
gi|294825031|gb|EFG41453.1| signal recognition particle protein [Staphylococcus aureus A9754]
gi|296887362|gb|EFH26264.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300886445|gb|EFK81647.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus TCH70]
gi|302751060|gb|ADL65237.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340182|gb|EFM06123.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315198476|gb|EFU28805.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CGS01]
gi|320140947|gb|EFW32794.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144338|gb|EFW36104.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329313906|gb|AEB88319.1| Signal recognition particle protein [Staphylococcus aureus subsp.
aureus T0131]
gi|329724762|gb|EGG61267.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21189]
gi|329733573|gb|EGG69901.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21193]
gi|334267269|gb|EGL85733.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21305]
gi|341843562|gb|EGS84785.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21259]
gi|364522454|gb|AEW65204.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 11819-97]
gi|365165170|gb|EHM56998.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21178]
gi|365224448|gb|EHM65713.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VCU006]
gi|365238211|gb|EHM79048.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21334]
gi|365241789|gb|EHM82524.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21340]
gi|365244940|gb|EHM85592.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21232]
gi|371983002|gb|EHP00150.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21283]
gi|371984724|gb|EHP01833.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21333]
gi|374363125|gb|AEZ37230.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus VC40]
gi|375029487|gb|EHS22814.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-88]
gi|375029983|gb|EHS23308.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-91]
gi|375037200|gb|EHS30252.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-111]
gi|375366101|gb|EHS70113.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-125]
gi|375370909|gb|EHS74701.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-189]
gi|375377148|gb|EHS80638.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-157]
gi|377719846|gb|EHT44016.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377725222|gb|EHT49337.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIG547]
gi|377770232|gb|EHT93994.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC93]
gi|377770882|gb|EHT94641.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC128]
gi|383971809|gb|EID87871.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CO-23]
gi|394329513|gb|EJE55615.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|421956477|gb|EKU08806.1| SRP54 subunit [Staphylococcus aureus CN79]
gi|436431711|gb|ELP29064.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436507507|gb|ELP43187.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21282]
gi|443406788|gb|ELS65359.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 21196]
gi|445546972|gb|ELY15248.1| signal recognition particle protein [Staphylococcus aureus
KT/314250]
gi|445562651|gb|ELY18818.1| signal recognition particle protein [Staphylococcus aureus KT/Y21]
Length = 455
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTQLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|229025286|ref|ZP_04181706.1| Signal recognition particle protein [Bacillus cereus AH1272]
gi|423389848|ref|ZP_17367074.1| signal recognition particle protein [Bacillus cereus BAG1X1-3]
gi|423418248|ref|ZP_17395337.1| signal recognition particle protein [Bacillus cereus BAG3X2-1]
gi|228736039|gb|EEL86614.1| Signal recognition particle protein [Bacillus cereus AH1272]
gi|401106521|gb|EJQ14482.1| signal recognition particle protein [Bacillus cereus BAG3X2-1]
gi|401641939|gb|EJS59656.1| signal recognition particle protein [Bacillus cereus BAG1X1-3]
Length = 449
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/406 (49%), Positives = 295/406 (72%), Gaps = 8/406 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+AVG +++ + P QQ++KIV++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFIKRVSERAVGQDVMKSLTPGQQVIKIVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKYNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDELAKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKLERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK++ G+
Sbjct: 390 QPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKSMTGM 433
>gi|222528961|ref|YP_002572843.1| signal recognition particle protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222455808|gb|ACM60070.1| signal recognition particle protein [Caldicellulosiruptor bescii
DSM 6725]
Length = 443
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/399 (49%), Positives = 279/399 (69%), Gaps = 2/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++++ ALLEADV+ VV+ F+ V+++AVG ++ + P QQ++KIV DE+V L+GG
Sbjct: 31 MKEVKLALLEADVNYKVVKDFINTVTQKAVGEEVLESLTPAQQVIKIVYDEMVNLLGGSD 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L F+ S + ++ GLQG GKTT + KLA LK+QGK+ +LVA D+YRPAAI QL ++
Sbjct: 91 TKLTFSPSGFSTYMMVGLQGSGKTTTAGKLAGLLKRQGKNPLLVACDIYRPAAIKQLEVV 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
++VGV + +IAK+G+E AK DV IVDTAGRL I++ +MDEL +K
Sbjct: 151 AQKVGVKCFADYNSKDAVKIAKEGIEFAKVSRCDVAIVDTAGRLHINQELMDELVAIKNA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ PTE+LLV+DAMTGQ+A + FN ++GI G I+TKLDGD+RGGAALSVK ++GKPIK
Sbjct: 211 IKPTEILLVLDAMTGQDAVNVAAAFNEQLGIDGIIMTKLDGDTRGGAALSVKAITGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+MEDLE F+PDRMA RILGMGD+L+ +EKAQE + Q+ AEE++KK+ S F
Sbjct: 271 FAGVGEKMEDLEAFHPDRMASRILGMGDILTLIEKAQEAIDQKKAEELEKKLRSMQFTLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MGS+S++I MIPG+ EK LK +EA+I +MT EER+ P +
Sbjct: 331 DFLDQLKQIKKMGSLSQIISMIPGVKLKGDVDFDAGEKELKKIEAIINSMTKEERQDPSI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 391 INSS--RKRRIAMGSGTTVQDVNRLLRQFEDMKRMMKQF 427
>gi|390557792|ref|ZP_10243195.1| signal recognition particle-like (SRP) GTPase [Nitrolancetus
hollandicus Lb]
gi|390174633|emb|CCF82484.1| signal recognition particle-like (SRP) GTPase [Nitrolancetus
hollandicus Lb]
Length = 507
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 290/400 (72%), Gaps = 3/400 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++RRALLEADV+ VV+ FV AV E+AVG +++ + P QQ++ IVRDEL+ ++G E
Sbjct: 31 MREVRRALLEADVNFKVVKDFVAAVRERAVGEEVLKALTPAQQVISIVRDELINILGSER 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A + PT+I+L GLQG GKTT AKLA +L+K GK +LVA DVYRPAAIDQL L
Sbjct: 91 VPLQTATAPPTIIMLVGLQGSGKTTHIAKLAAHLRKDGKRPLLVAADVYRPAAIDQLETL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ V VY+ G + P +IAK ++ A+ + V++DTAGRLQID+ MM EL+ +
Sbjct: 151 GAQINVQVYSEGAKENPVKIAKNAIQYARSYGFNPVMIDTAGRLQIDEPMMLELEHLTEE 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ PTE LLV DAMTGQEA + F+ + +TG ILTK+DGD+RGGAALS++ V G PIK
Sbjct: 211 VEPTETLLVADAMTGQEAVNVAQEFHRRLNLTGLILTKMDGDARGGAALSIRSVVGVPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GER++ LEPFYPDR+A RILGMGDVL+ +E+AQ + +++++++++K+++ +F+
Sbjct: 271 FIGTGERIDALEPFYPDRLASRILGMGDVLTLIERAQTEITEDESKKLEEKVLTGSFNLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q + + +MG +++++ MIPG+G+ Q V+ ++ K +EA+I +MTPEER +PE
Sbjct: 331 DFLRQLQQIKKMGPLTQLLEMIPGIGQALRQQDVQVSDDEYKHIEAIIYSMTPEERRRPE 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ P RR+R+A SG ++ +V+QL+ Q QM+ M +L
Sbjct: 391 II--KPSRRRRIAMGSGTSQAEVNQLLTQFKQMQKMMADL 428
>gi|418008198|ref|ZP_12648066.1| signal recognition particle subunit [Lactobacillus casei UW4]
gi|410547142|gb|EKQ21380.1| signal recognition particle subunit [Lactobacillus casei UW4]
Length = 478
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/416 (48%), Positives = 288/416 (69%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ F++ V +A+G ++ + P QQ++KIV DELVK MG
Sbjct: 32 MREIRLALLEADVNFDVVKTFIKNVRTKALGAEVLESLTPSQQIIKIVNDELVKTMGEAA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++AGLQG GKTT KL+ YL + +L+A DVYRPAAIDQL
Sbjct: 92 VPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMDNDSARPLLIAADVYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+ELK++K
Sbjct: 152 IGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNELKNIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAHPNDILLVVDAMTGQAAVDIAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM +KI +FDF
Sbjct: 272 KFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMAEKIRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
NDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+ERE P
Sbjct: 332 NDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQEREDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L L
Sbjct: 392 DLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDGL 441
>gi|409997447|ref|YP_006751848.1| signal recognition particle protein [Lactobacillus casei W56]
gi|406358459|emb|CCK22729.1| Signal recognition particle protein [Lactobacillus casei W56]
Length = 479
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/416 (48%), Positives = 288/416 (69%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ F++ V +A+G ++ + P QQ++KIV DELVK MG
Sbjct: 33 MREIRLALLEADVNFDVVKTFIKNVRTKALGAEVLESLTPSQQIIKIVNDELVKTMGEAA 92
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++AGLQG GKTT KL+ YL + +L+A DVYRPAAIDQL
Sbjct: 93 VPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMDNDSARPLLIAADVYRPAAIDQLQT 152
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+ELK++K
Sbjct: 153 IGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNELKNIKE 212
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 213 LAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAVTGKPI 272
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM +KI +FDF
Sbjct: 273 KFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMAEKIRENSFDF 332
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
NDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+ERE P
Sbjct: 333 NDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQEREDP 392
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L L
Sbjct: 393 DLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDGL 442
>gi|417923660|ref|ZP_12567119.1| signal recognition particle protein [Streptococcus mitis SK569]
gi|418966824|ref|ZP_13518531.1| signal recognition particle protein [Streptococcus mitis SK616]
gi|342836725|gb|EGU70934.1| signal recognition particle protein [Streptococcus mitis SK569]
gi|383346269|gb|EID24329.1| signal recognition particle protein [Streptococcus mitis SK616]
Length = 523
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEIIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|417849418|ref|ZP_12495339.1| signal recognition particle protein [Streptococcus mitis SK1080]
gi|339456296|gb|EGP68888.1| signal recognition particle protein [Streptococcus mitis SK1080]
Length = 523
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVNERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|418974258|ref|ZP_13522176.1| signal recognition particle protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383345430|gb|EID23554.1| signal recognition particle protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
Length = 523
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKVL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAHEFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIAQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|15903209|ref|NP_358759.1| signal recognition particle protein [Streptococcus pneumoniae R6]
gi|116515651|ref|YP_816611.1| signal recognition particle protein [Streptococcus pneumoniae D39]
gi|421266304|ref|ZP_15717185.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR27]
gi|15458797|gb|AAK99969.1| Signal recognition particle (Fifty four homolog) [Streptococcus
pneumoniae R6]
gi|116076227|gb|ABJ53947.1| signal recognition particle protein [Streptococcus pneumoniae D39]
gi|395867520|gb|EJG78643.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR27]
Length = 523
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + ++VA D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMVAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|325105803|ref|YP_004275457.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pedobacter
saltans DSM 12145]
gi|324974651|gb|ADY53635.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pedobacter
saltans DSM 12145]
Length = 448
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/400 (50%), Positives = 273/400 (68%), Gaps = 5/400 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++IR+ALL+ADV+ + F V ++A+G ++ + P Q L K++ DEL LMGG V
Sbjct: 31 MKEIRKALLDADVNYKTAKSFTDEVKQKALGQNVLTAISPGQLLTKVMNDELTLLMGGSV 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVI 119
+EL K PT+IL+AGL G GKTT + KLAN+LK Q K +LVAGDVYRPAAIDQL +
Sbjct: 91 TELDL-KQNPTIILIAGLNGAGKTTFTGKLANFLKTQKNKKPLLVAGDVYRPAAIDQLEV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L QVG VYT P IA +G+ K+ +V+I+DTAGRL +D A+MDE+ +VK+
Sbjct: 150 LAGQVGAEVYTNRESKDPVAIALEGIAHGKQNGNNVIIIDTAGRLTLDDALMDEIAEVKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
NP E+L VVDAMTGQ+A FN + TG +LTKLDGD+RGGAALS+K V KPI
Sbjct: 210 ATNPQEILFVVDAMTGQDAVNTAKAFNDRLDFTGVVLTKLDGDTRGGAALSIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ L+ FYPDRMA RILGMGDV+S VE+AQ+ ++ A E+QKKI FDF
Sbjct: 270 KFVGTGEKMDALDVFYPDRMASRILGMGDVVSLVERAQQQFDEKKAAELQKKIRKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + + +MG++ ++GMIPG+GK+ + + + K +EA+I +MTP ERE P+
Sbjct: 330 NDFLGQIQQIKKMGNIKDLMGMIPGVGKMMK-NIEVDDNAFKGIEAIIHSMTPYERENPD 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ +P RR+R+A+ SG +V++L+ Q MR MK
Sbjct: 389 TI--NPSRRQRIAKGSGTDIAEVNKLIKQFEDMRKVMKQF 426
>gi|224024147|ref|ZP_03642513.1| hypothetical protein BACCOPRO_00869 [Bacteroides coprophilus DSM
18228]
gi|224017369|gb|EEF75381.1| hypothetical protein BACCOPRO_00869 [Bacteroides coprophilus DSM
18228]
Length = 443
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/402 (50%), Positives = 279/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL KLMGG+
Sbjct: 31 LKDVRRALLDADVNYKVAKNFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTKLMGGDT 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ K+RP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 AEIEL-KNRPAVILMSGLQGSGKTTFSGKLARMLKMKKNRKPLLVACDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+QV VPVY+ P QIA ++EAK K D+VIVDTAGRL ID+ MM+E++ +K
Sbjct: 150 LGQQVEVPVYSEPESKNPVQIALNAIQEAKAKGYDLVIVDTAGRLAIDEQMMNEIEAIKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPDETLFVVDAMTGQDAVNTAREFNERLDFNGVVLTKLDGDTRGGAALSIRTVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAVDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + + +MG++ + MIPG+GK + + + K +EA+I +MTP+ER PE
Sbjct: 330 NDFLTQIQQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPQERTHPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S RR R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 389 ILNGS--RRTRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|73662841|ref|YP_301622.1| signal recognition particle [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495356|dbj|BAE18677.1| signal recognition particle [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 455
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VS++A+G +++ + P QQ++KIV++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKTVSDRALGSDVMKSLTPGQQVIKIVQEELTQLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S + A PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAIDQL
Sbjct: 92 STITMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI + ++ AK++++D VI+DTAGRL +D+A+M EL DVK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVENAIKHAKEEHLDFVIIDTAGRLHVDEALMQELSDVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ITKPDEIMLVVDAMTGQDAVNVAQSFDEQLEVSGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LEPF+P+RMA RILGMGDVLS +EKAQ+ + ++ A++++KK+ +++F
Sbjct: 272 KFVGMSEKLDGLEPFHPERMASRILGMGDVLSLIEKAQQDVDEDKAKDLEKKMRTSSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGIDKLNMNEKQIDHIKAIIQSMTPSERNDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSVQEVNRLMKQFNDMKKMMKQF 430
>gi|228992573|ref|ZP_04152500.1| Signal recognition particle protein [Bacillus pseudomycoides DSM
12442]
gi|228998621|ref|ZP_04158208.1| Signal recognition particle protein [Bacillus mycoides Rock3-17]
gi|229006121|ref|ZP_04163809.1| Signal recognition particle protein [Bacillus mycoides Rock1-4]
gi|228755197|gb|EEM04554.1| Signal recognition particle protein [Bacillus mycoides Rock1-4]
gi|228761089|gb|EEM10048.1| Signal recognition particle protein [Bacillus mycoides Rock3-17]
gi|228767207|gb|EEM15843.1| Signal recognition particle protein [Bacillus pseudomycoides DSM
12442]
Length = 449
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/406 (49%), Positives = 293/406 (72%), Gaps = 8/406 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVSERAVGQDVMKSLTPGQQVIKVVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDELAKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKVERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 390 HPEIINAS--RKKRIAKGSGTTVQEINRLLKQFEDMKKMMKTMTGM 433
>gi|417886283|ref|ZP_12530430.1| signal recognition particle protein [Lactobacillus oris F0423]
gi|341593781|gb|EGS36606.1| signal recognition particle protein [Lactobacillus oris F0423]
Length = 480
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/417 (48%), Positives = 287/417 (68%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A G +++G+ P QQ+VKIV DEL KLMG E
Sbjct: 32 MREIRLALLEADVNFTVVKDFVKTVREKAAGAEVLKGLNPAQQIVKIVNDELTKLMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++ GLQG GKTT + KLA LK + + M +A DVYRPAAI QL
Sbjct: 92 VPLNKAAHIPTVIMMVGLQGAGKTTTAGKLALRLKNEDHARPMFIAADVYRPAAITQLQQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ +Q+ VPV+ GT+V P +I ++G+E AK+ + D VI+DTAGRLQID+ +MDEL ++K
Sbjct: 152 VADQIDVPVFEKGTDVDPVEIVREGMEVAKQNHNDYVIIDTAGRLQIDEQLMDELANIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++NP E+LLV+D+MTGQ A F+ ++ ITG ILTKLDGD+RGGAA+S++ V+GKPI
Sbjct: 212 LVNPDEILLVIDSMTGQNAVNTAQGFDDKLDITGVILTKLDGDTRGGAAMSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M DL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E K+ FD+
Sbjct: 272 KFVGEGEKMADLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETMDKMRENTFDY 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q V +MG + ++ M+PGM PA + K ++A++ +MTPEERE
Sbjct: 332 NDFLAQMDQVTKMGPLENILKMMPGMAN-NPALKNINIDPKQFAHIKAIVLSMTPEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+L+ +P RR+R+A +G+ +V++++ Q QMR MK + G++ + NL
Sbjct: 391 PDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMRKMMKQV----TNGNMSGMQNL 441
>gi|289550983|ref|YP_003471887.1| signal recognition particle, subunit Ffh SRP54 [Staphylococcus
lugdunensis HKU09-01]
gi|315658478|ref|ZP_07911350.1| signal recognition particle protein [Staphylococcus lugdunensis
M23590]
gi|385784604|ref|YP_005760777.1| signal recognition particle protein [Staphylococcus lugdunensis
N920143]
gi|289180515|gb|ADC87760.1| Signal recognition particle, subunit Ffh SRP54 [Staphylococcus
lugdunensis HKU09-01]
gi|315496807|gb|EFU85130.1| signal recognition particle protein [Staphylococcus lugdunensis
M23590]
gi|339894860|emb|CCB54157.1| signal recognition particle protein [Staphylococcus lugdunensis
N920143]
Length = 455
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 291/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F+ VSE+A+G +++ + P QQ++KIV+DEL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFINTVSERALGSDVMQSLTPGQQVIKIVQDELTQLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + A PTV+++ GLQG GKTT + KLA + KK K MLVAGD+YRPAAIDQL
Sbjct: 92 TTIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAGDIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPVY+ G +VKP QI + L+ AK++++D VI+DTAGRL ID+A+M+EL++VK
Sbjct: 152 VGKQLDVPVYSEGDQVKPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNELQEVKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P EV+LVVDAMTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ISKPDEVMLVVDAMTGQDAVNVAQSFDEQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+M+ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKMDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRDSSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL Q V +G + ++ MIPGM K+ ++ +K + ++A+I++MTP ER P
Sbjct: 332 EDFLDQLDQVKNLGPLDDIMKMIPGMNKMKGMNKLNMDDKQIDHIKAIIQSMTPMERANP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 ATLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|149007045|ref|ZP_01830714.1| signal recognition particle protein [Streptococcus pneumoniae
SP18-BS74]
gi|168484497|ref|ZP_02709449.1| signal recognition particle protein [Streptococcus pneumoniae
CDC1873-00]
gi|307127122|ref|YP_003879153.1| signal recognition particle protein [Streptococcus pneumoniae
670-6B]
gi|417677022|ref|ZP_12326431.1| signal recognition particle protein [Streptococcus pneumoniae
GA17545]
gi|417696476|ref|ZP_12345655.1| signal recognition particle protein [Streptococcus pneumoniae
GA47368]
gi|418091914|ref|ZP_12729056.1| signal recognition particle protein [Streptococcus pneumoniae
GA44452]
gi|418110258|ref|ZP_12747281.1| signal recognition particle protein [Streptococcus pneumoniae
GA49447]
gi|418112633|ref|ZP_12749633.1| signal recognition particle protein [Streptococcus pneumoniae
GA41538]
gi|418132098|ref|ZP_12768973.1| signal recognition particle protein [Streptococcus pneumoniae
GA11304]
gi|418155278|ref|ZP_12792007.1| signal recognition particle protein [Streptococcus pneumoniae
GA16242]
gi|418162345|ref|ZP_12799029.1| signal recognition particle protein [Streptococcus pneumoniae
GA17328]
gi|418166925|ref|ZP_12803581.1| signal recognition particle protein [Streptococcus pneumoniae
GA17971]
gi|418169309|ref|ZP_12805952.1| signal recognition particle protein [Streptococcus pneumoniae
GA19077]
gi|418219027|ref|ZP_12845694.1| signal recognition particle protein [Streptococcus pneumoniae
NP127]
gi|418221339|ref|ZP_12847992.1| signal recognition particle protein [Streptococcus pneumoniae
GA47751]
gi|418225677|ref|ZP_12852305.1| signal recognition particle protein [Streptococcus pneumoniae
NP112]
gi|418238848|ref|ZP_12865401.1| signal recognition particle protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422864|ref|ZP_13963079.1| signal recognition particle protein [Streptococcus pneumoniae
GA43264]
gi|419460118|ref|ZP_14000047.1| signal recognition particle protein [Streptococcus pneumoniae
GA02270]
gi|419462451|ref|ZP_14002357.1| signal recognition particle protein [Streptococcus pneumoniae
GA02714]
gi|419466686|ref|ZP_14006569.1| signal recognition particle protein [Streptococcus pneumoniae
GA05248]
gi|419488363|ref|ZP_14028116.1| signal recognition particle protein [Streptococcus pneumoniae
GA44386]
gi|419512634|ref|ZP_14052268.1| signal recognition particle protein [Streptococcus pneumoniae
GA05578]
gi|419516909|ref|ZP_14056525.1| signal recognition particle protein [Streptococcus pneumoniae
GA02506]
gi|419526022|ref|ZP_14065584.1| signal recognition particle protein [Streptococcus pneumoniae
GA14373]
gi|421272862|ref|ZP_15723704.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR55]
gi|421283435|ref|ZP_15734222.1| signal recognition particle protein [Streptococcus pneumoniae
GA04216]
gi|147761349|gb|EDK68315.1| signal recognition particle protein [Streptococcus pneumoniae
SP18-BS74]
gi|172042260|gb|EDT50306.1| signal recognition particle protein [Streptococcus pneumoniae
CDC1873-00]
gi|306484184|gb|ADM91053.1| signal recognition particle protein [Streptococcus pneumoniae
670-6B]
gi|332074621|gb|EGI85095.1| signal recognition particle protein [Streptococcus pneumoniae
GA17545]
gi|332201751|gb|EGJ15821.1| signal recognition particle protein [Streptococcus pneumoniae
GA47368]
gi|353764014|gb|EHD44564.1| signal recognition particle protein [Streptococcus pneumoniae
GA44452]
gi|353782461|gb|EHD62895.1| signal recognition particle protein [Streptococcus pneumoniae
GA49447]
gi|353782995|gb|EHD63424.1| signal recognition particle protein [Streptococcus pneumoniae
GA41538]
gi|353807764|gb|EHD88033.1| signal recognition particle protein [Streptococcus pneumoniae
GA11304]
gi|353820656|gb|EHE00839.1| signal recognition particle protein [Streptococcus pneumoniae
GA16242]
gi|353827774|gb|EHE07923.1| signal recognition particle protein [Streptococcus pneumoniae
GA17328]
gi|353830521|gb|EHE10651.1| signal recognition particle protein [Streptococcus pneumoniae
GA17971]
gi|353834494|gb|EHE14595.1| signal recognition particle protein [Streptococcus pneumoniae
GA19077]
gi|353874649|gb|EHE54503.1| signal recognition particle protein [Streptococcus pneumoniae
GA47751]
gi|353875682|gb|EHE55534.1| signal recognition particle protein [Streptococcus pneumoniae
NP127]
gi|353880874|gb|EHE60688.1| signal recognition particle protein [Streptococcus pneumoniae
NP112]
gi|353893250|gb|EHE72996.1| signal recognition particle protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|379531123|gb|EHY96358.1| signal recognition particle protein [Streptococcus pneumoniae
GA02270]
gi|379531922|gb|EHY97155.1| signal recognition particle protein [Streptococcus pneumoniae
GA02714]
gi|379544809|gb|EHZ09953.1| signal recognition particle protein [Streptococcus pneumoniae
GA05248]
gi|379558282|gb|EHZ23318.1| signal recognition particle protein [Streptococcus pneumoniae
GA14373]
gi|379587390|gb|EHZ52238.1| signal recognition particle protein [Streptococcus pneumoniae
GA43264]
gi|379590478|gb|EHZ55316.1| signal recognition particle protein [Streptococcus pneumoniae
GA44386]
gi|379637104|gb|EIA01662.1| signal recognition particle protein [Streptococcus pneumoniae
GA05578]
gi|379638982|gb|EIA03526.1| signal recognition particle protein [Streptococcus pneumoniae
GA02506]
gi|395874516|gb|EJG85599.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR55]
gi|395881398|gb|EJG92447.1| signal recognition particle protein [Streptococcus pneumoniae
GA04216]
Length = 523
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKTL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|418014537|ref|ZP_12654133.1| signal recognition particle, subunit Ffh [Lactobacillus casei
Lpc-37]
gi|410553585|gb|EKQ27587.1| signal recognition particle, subunit Ffh [Lactobacillus casei
Lpc-37]
Length = 478
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/416 (48%), Positives = 287/416 (68%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ F++ V +A+G ++ + P QQ++KIV DELVK MG
Sbjct: 32 MREIRLALLEADVNFDVVKTFIKNVRTKALGAEVLESLTPSQQIIKIVNDELVKTMGEAA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++AGLQG GKTT KL+ YL + +L+A DVYRPAAIDQL
Sbjct: 92 VPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMDNDSARPLLIAADVYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+ELK++K
Sbjct: 152 IGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNELKNIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ ++ A EM +KI +FDF
Sbjct: 272 KFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQNNYDEKQAMEMAEKIRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
NDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+ERE P
Sbjct: 332 NDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQEREDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L L
Sbjct: 392 DLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDGL 441
>gi|16803841|ref|NP_465326.1| hypothetical protein lmo1801 [Listeria monocytogenes EGD-e]
gi|47097384|ref|ZP_00234935.1| signal recognition particle protein [Listeria monocytogenes str.
1/2a F6854]
gi|254912359|ref|ZP_05262371.1| signal recognition particle protein [Listeria monocytogenes J2818]
gi|254936686|ref|ZP_05268383.1| signal recognition particle protein [Listeria monocytogenes F6900]
gi|284802247|ref|YP_003414112.1| hypothetical protein LM5578_2003 [Listeria monocytogenes 08-5578]
gi|284995389|ref|YP_003417157.1| hypothetical protein LM5923_1954 [Listeria monocytogenes 08-5923]
gi|386044109|ref|YP_005962914.1| signal recognition particle protein [Listeria monocytogenes 10403S]
gi|386047453|ref|YP_005965785.1| signal recognition particle protein [Listeria monocytogenes J0161]
gi|386050778|ref|YP_005968769.1| signal recognition particle protein [Listeria monocytogenes FSL
R2-561]
gi|386054056|ref|YP_005971614.1| signal recognition particle protein [Listeria monocytogenes Finland
1998]
gi|404284297|ref|YP_006685194.1| signal recognition particle protein [Listeria monocytogenes
SLCC2372]
gi|404411102|ref|YP_006696690.1| signal recognition particle protein [Listeria monocytogenes
SLCC5850]
gi|404413880|ref|YP_006699467.1| signal recognition particle protein [Listeria monocytogenes
SLCC7179]
gi|405758852|ref|YP_006688128.1| signal recognition particle protein [Listeria monocytogenes
SLCC2479]
gi|16411255|emb|CAC99879.1| ffh [Listeria monocytogenes EGD-e]
gi|47014232|gb|EAL05214.1| signal recognition particle protein [Listeria monocytogenes str.
1/2a F6854]
gi|258609282|gb|EEW21890.1| signal recognition particle protein [Listeria monocytogenes F6900]
gi|284057809|gb|ADB68750.1| hypothetical protein LM5578_2003 [Listeria monocytogenes 08-5578]
gi|284060856|gb|ADB71795.1| hypothetical protein LM5923_1954 [Listeria monocytogenes 08-5923]
gi|293590340|gb|EFF98674.1| signal recognition particle protein [Listeria monocytogenes J2818]
gi|345534444|gb|AEO03885.1| signal recognition particle protein [Listeria monocytogenes J0161]
gi|345537343|gb|AEO06783.1| signal recognition particle protein [Listeria monocytogenes 10403S]
gi|346424624|gb|AEO26149.1| signal recognition particle protein [Listeria monocytogenes FSL
R2-561]
gi|346646707|gb|AEO39332.1| signal recognition particle protein [Listeria monocytogenes Finland
1998]
gi|404230928|emb|CBY52332.1| signal recognition particle protein [Listeria monocytogenes
SLCC5850]
gi|404233799|emb|CBY55202.1| signal recognition particle protein [Listeria monocytogenes
SLCC2372]
gi|404236734|emb|CBY58136.1| signal recognition particle protein [Listeria monocytogenes
SLCC2479]
gi|404239579|emb|CBY60980.1| signal recognition particle protein [Listeria monocytogenes
SLCC7179]
gi|441471557|emb|CCQ21312.1| Signal recognition particle protein [Listeria monocytogenes]
gi|441474688|emb|CCQ24442.1| Signal recognition particle protein [Listeria monocytogenes N53-1]
Length = 450
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIKTVSERAVGADVMKSLTPGQQVIKIVQEELTSLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDELK VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ +
Sbjct: 272 KFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKDNSMTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT E++ P
Sbjct: 332 DDFLEQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKNEKDNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 392 DIINAS--RRKRIARGSGRPVQEINRLLKQFAEMKKMMKQM 430
>gi|257425291|ref|ZP_05601716.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257430584|ref|ZP_05606966.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 68-397]
gi|257433345|ref|ZP_05609703.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257436187|ref|ZP_05612234.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M876]
gi|282914013|ref|ZP_06321800.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M899]
gi|282924058|ref|ZP_06331734.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C101]
gi|293510006|ref|ZP_06668714.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M809]
gi|293526593|ref|ZP_06671278.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M1015]
gi|257271748|gb|EEV03886.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257278712|gb|EEV09331.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus 68-397]
gi|257281438|gb|EEV11575.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257284469|gb|EEV14589.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M876]
gi|282314030|gb|EFB44422.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus C101]
gi|282322081|gb|EFB52405.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M899]
gi|290920665|gb|EFD97728.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M1015]
gi|291466950|gb|EFF09468.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus M809]
Length = 455
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL KLMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGG ALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGVALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|414158376|ref|ZP_11414670.1| signal recognition particle protein [Streptococcus sp. F0441]
gi|417794291|ref|ZP_12441549.1| signal recognition particle protein [Streptococcus oralis SK255]
gi|334270135|gb|EGL88542.1| signal recognition particle protein [Streptococcus oralis SK255]
gi|410870921|gb|EKS18878.1| signal recognition particle protein [Streptococcus sp. F0441]
Length = 523
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHDVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|374582903|ref|ZP_09655997.1| signal recognition particle protein [Desulfosporosinus youngiae DSM
17734]
gi|374418985|gb|EHQ91420.1| signal recognition particle protein [Desulfosporosinus youngiae DSM
17734]
Length = 453
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/399 (50%), Positives = 281/399 (70%), Gaps = 4/399 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+++G ++ + P Q ++KIV +E+++LMGG
Sbjct: 31 MREVRVALLEADVNFKVVKDFVAKVKERSIGQEVLESLSPAQHVIKIVHEEMIELMGGAT 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+++ + PT+ILL GLQG GKTT +AKLAN LKKQGK +LVA D+YRPAAI QL +L
Sbjct: 91 GKILISSKPPTIILLIGLQGAGKTTHAAKLANMLKKQGKHPLLVACDIYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV++ G E P IAK + A + DVVI+DTAGRL I++ +M EL+D+K
Sbjct: 151 GGQLNVPVFSMGQEA-PRDIAKASIAHANQNGQDVVIIDTAGRLHINEELMGELRDIKSA 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGG ALS+K V+G IK
Sbjct: 210 VKPHEILLVVDAMTGQDAVNVAESFHNELGLDGVILTKLDGDTRGGGALSIKAVTGCTIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M+ LEPF+PDRMA RILGMGDVL+ +EKAQE ++ A+EM++K+ F +
Sbjct: 270 FVGIGEKMDALEPFHPDRMASRILGMGDVLTLIEKAQESFDEKKAKEMEQKLRKQEFTLD 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + +MG +S ++ MIPG+GK ++ EK +EA+I +MT EER KP +
Sbjct: 330 DFLDQMEQMKKMGPLSSILEMIPGVGK-QAKDIKIDEKDTAHVEAIIRSMTTEERRKPVI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ +S R+KR+A+ SG + Q V +L+ Q QM+ MK
Sbjct: 389 IKDS--RKKRIAKGSGTSVQDVGRLLKQFEQMQKMMKQF 425
>gi|385261944|ref|ZP_10040059.1| signal recognition particle protein [Streptococcus sp. SK643]
gi|385191685|gb|EIF39097.1| signal recognition particle protein [Streptococcus sp. SK643]
Length = 523
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQVNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + Q+ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDQQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAVGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|229086398|ref|ZP_04218574.1| Signal recognition particle protein [Bacillus cereus Rock3-44]
gi|228696914|gb|EEL49723.1| Signal recognition particle protein [Bacillus cereus Rock3-44]
Length = 449
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/406 (49%), Positives = 294/406 (72%), Gaps = 8/406 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVSERAVGQDVMKSLTPGQQVIKVVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDELAKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKIERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 390 QPEIINAS--RKKRIAKGSGTTVQEINRLLKQFEDMKKMMKTMTGM 433
>gi|194398377|ref|YP_002037890.1| signal recognition particle protein [Streptococcus pneumoniae G54]
gi|194358044|gb|ACF56492.1| signal recognition particle protein [Streptococcus pneumoniae G54]
Length = 523
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEXLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|157692277|ref|YP_001486739.1| signal recognition particle protein Ffh [Bacillus pumilus SAFR-032]
gi|157681035|gb|ABV62179.1| signal recognition particle protein Ffh [Bacillus pumilus SAFR-032]
Length = 446
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/407 (50%), Positives = 302/407 (74%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQEVMKSLTPGQQVIKVVKEELTQLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT + KLAN L KK + M+VA D+YRPAAI QL
Sbjct: 92 SKIAVAKKSPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMMVAADIYRPAAIQQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID+ +MDEL+ VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHHDYVILDTAGRLHIDEELMDELQKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 VANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K GE+++ +EPF+P+RMA RILGMGDVL+ +EKAQ + Q+ A+E+++K+ + +F
Sbjct: 272 KFAALGEKLDAIEPFHPERMASRILGMGDVLTLIEKAQANVDQDKAKELEQKMRTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I++MT EE+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLDELIQMMPGAGKMKGLKNVQVDEKQLNHIEAIIKSMTTEEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
E++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 EVINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|404287230|ref|YP_006693816.1| signal recognition particle protein [Listeria monocytogenes
serotype 7 str. SLCC2482]
gi|404246159|emb|CBY04384.1| signal recognition particle protein [Listeria monocytogenes
serotype 7 str. SLCC2482]
Length = 467
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIKTVSERAVGADVMKSLTPGQQVIKIVQEELTSLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDELK VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ +
Sbjct: 272 KFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKDNSMTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT E++ P
Sbjct: 332 DDFLEQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKNEKDNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 392 DIINAS--RRKRIARGSGRPVQEINRLLKQFGEMKKMMKQM 430
>gi|306829387|ref|ZP_07462577.1| signal recognition particle protein [Streptococcus mitis ATCC 6249]
gi|304428473|gb|EFM31563.1| signal recognition particle protein [Streptococcus mitis ATCC 6249]
Length = 523
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|418094094|ref|ZP_12731221.1| signal recognition particle protein [Streptococcus pneumoniae
GA49138]
gi|353764590|gb|EHD45138.1| signal recognition particle protein [Streptococcus pneumoniae
GA49138]
Length = 523
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|421872835|ref|ZP_16304452.1| signal recognition particle protein [Brevibacillus laterosporus
GI-9]
gi|372458250|emb|CCF14001.1| signal recognition particle protein [Brevibacillus laterosporus
GI-9]
Length = 480
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/423 (47%), Positives = 291/423 (68%), Gaps = 12/423 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++FV V E+AVG +++ + P Q ++K+V +EL +LMGG V
Sbjct: 32 MREVRLALLEADVNFKVVKQFVARVKERAVGQDVLKSLTPGQMVIKVVNEELTELMGGNV 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L + PTVI++ GLQG GKTT + KLA L+KQ + MLVA D+YRPAAI QL +L
Sbjct: 92 SKLAVSNRPPTVIMMVGLQGAGKTTTTGKLAKLLQKQNRKPMLVACDIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ PV+ G +V P +IA + +E AK+ + D VI+DTAGRL ID+ +M+EL+ V+ V
Sbjct: 152 GEQLSAPVFAMGDQVSPVEIATKAIEHAKENHYDYVILDTAGRLHIDETLMEELQQVREV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAMTGQ+A + +FN ++ +TG ILTKLDGD+RGGAALSVK V+GKPIK
Sbjct: 212 AKPDEILLVVDAMTGQDAVNVAESFNNQLELTGVILTKLDGDTRGGAALSVKAVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ LEPF+PDRMA RILGMGDVLS +EKAQE + + A+EM++++ F F+
Sbjct: 272 FAAMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQESVDVDKAKEMERQMRQGEFTFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
FL + + ++G + ++GM+PGM K+ + ++ EK + EA++++MT EER P+
Sbjct: 332 MFLDSMQQMRQLGPLEDLLGMLPGMNKMKGMKDLKVDEKQIARTEAIVKSMTKEERANPD 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME---------GGSLPA 410
++ + RRKR+A SG T Q+V++ + Q M+ MK G+ + GG P
Sbjct: 392 IMNAN--RRKRIAAGSGTTIQEVNRFIKQFEDMKKMMKQFTGMTDKMKKKSKKKGGFFPF 449
Query: 411 LSN 413
N
Sbjct: 450 KGN 452
>gi|191638588|ref|YP_001987754.1| Signal recognition particle protein Ffh [Lactobacillus casei BL23]
gi|227534903|ref|ZP_03964952.1| signal recognition particle protein Ffh [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|239631962|ref|ZP_04674993.1| signal recognition particle GTPase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301066648|ref|YP_003788671.1| signal recognition particle GTPase [Lactobacillus casei str. Zhang]
gi|385820302|ref|YP_005856689.1| Signal recognition particle protein [Lactobacillus casei LC2W]
gi|385823497|ref|YP_005859839.1| Signal recognition particle protein [Lactobacillus casei BD-II]
gi|417980376|ref|ZP_12621056.1| signal recognition particle, subunit Ffh [Lactobacillus casei 12A]
gi|417983618|ref|ZP_12624254.1| signal recognition particle, subunit Ffh [Lactobacillus casei 21/1]
gi|417986977|ref|ZP_12627539.1| signal recognition particle, subunit Ffh [Lactobacillus casei 32G]
gi|417993117|ref|ZP_12633467.1| signal recognition particle, subunit Ffh [Lactobacillus casei
CRF28]
gi|417996469|ref|ZP_12636748.1| signal recognition particle, subunit Ffh [Lactobacillus casei M36]
gi|417999336|ref|ZP_12639546.1| signal recognition particle, subunit Ffh [Lactobacillus casei
T71499]
gi|418011036|ref|ZP_12650805.1| signal recognition particle, subunit Ffh [Lactobacillus casei
Lc-10]
gi|190712890|emb|CAQ66896.1| Signal recognition particle protein Ffh [Lactobacillus casei BL23]
gi|227187659|gb|EEI67726.1| signal recognition particle protein Ffh [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|239526427|gb|EEQ65428.1| signal recognition particle GTPase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300439055|gb|ADK18821.1| Signal recognition particle GTPase [Lactobacillus casei str. Zhang]
gi|327382629|gb|AEA54105.1| Signal recognition particle protein [Lactobacillus casei LC2W]
gi|327385824|gb|AEA57298.1| Signal recognition particle protein [Lactobacillus casei BD-II]
gi|410524041|gb|EKP98958.1| signal recognition particle, subunit Ffh [Lactobacillus casei 32G]
gi|410524699|gb|EKP99606.1| signal recognition particle, subunit Ffh [Lactobacillus casei 12A]
gi|410527887|gb|EKQ02749.1| signal recognition particle, subunit Ffh [Lactobacillus casei 21/1]
gi|410532029|gb|EKQ06740.1| signal recognition particle, subunit Ffh [Lactobacillus casei
CRF28]
gi|410535315|gb|EKQ09940.1| signal recognition particle, subunit Ffh [Lactobacillus casei M36]
gi|410539356|gb|EKQ13889.1| signal recognition particle, subunit Ffh [Lactobacillus casei
T71499]
gi|410553084|gb|EKQ27092.1| signal recognition particle, subunit Ffh [Lactobacillus casei
Lc-10]
Length = 478
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/416 (48%), Positives = 288/416 (69%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ F++ V +A+G ++ + P QQ++KIV DELVK MG
Sbjct: 32 MREIRLALLEADVNFDVVKTFIKNVRTKALGAEVLESLTPSQQIIKIVNDELVKTMGEAA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++AGLQG GKTT KL+ YL + +L+A DVYRPAAIDQL
Sbjct: 92 VPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMDNDSARPLLIAADVYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+ELK++K
Sbjct: 152 IGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNELKNIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM +KI +FDF
Sbjct: 272 KFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMAEKIRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
NDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+ERE P
Sbjct: 332 NDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQEREDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L L
Sbjct: 392 DLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDGL 441
>gi|270292853|ref|ZP_06199064.1| signal recognition particle protein [Streptococcus sp. M143]
gi|270278832|gb|EFA24678.1| signal recognition particle protein [Streptococcus sp. M143]
Length = 523
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKTL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFIEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|255655263|ref|ZP_05400672.1| signal recognition particle protein [Clostridium difficile
QCD-23m63]
Length = 452
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/423 (47%), Positives = 288/423 (68%), Gaps = 11/423 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F++ V E+ VG +++ + P Q ++KIV +EL LMG
Sbjct: 32 MREVKLALLEADVNFKVVKDFIKKVQERCVGQEVMQSLTPAQHVIKIVNEELTSLMGDVQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+++ + PT++++ GLQG GKTT + KL Y KKQGK +LVA D+YRPAAI QL ++
Sbjct: 92 SKVMISSKPPTILMMVGLQGAGKTTTAGKLGGYFKKQGKKPLLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE++ +PV+ G + P IAK GL A K D+VI+DTAGRL ID+ +MDELK +K
Sbjct: 152 GEKLDIPVFNMGDKENPVNIAKAGLSHAIKNANDLVIIDTAGRLHIDEVLMDELKSIKSE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAALSIRAVTQKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E+++KI DF
Sbjct: 272 FMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELEQKIKKQELDFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+Q + MG + +++GMIPGMG + V K +K +A+I++MT ER P
Sbjct: 332 DFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAIIQSMTTYERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG-------GSLPAL 411
+L S R+KR+A+ SG + Q V++L+ QL +M+ MK G + G LP L
Sbjct: 392 GVLNAS--RKKRIARGSGTSVQDVNRLIKQLNEMKKMMKMFAGSQKSMKKRGGLGGLPFL 449
Query: 412 SNL 414
+ +
Sbjct: 450 NKI 452
>gi|334135560|ref|ZP_08509044.1| signal recognition particle protein [Paenibacillus sp. HGF7]
gi|333606896|gb|EGL18226.1| signal recognition particle protein [Paenibacillus sp. HGF7]
Length = 453
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/420 (48%), Positives = 291/420 (69%), Gaps = 3/420 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VV+ F+ V E+AVG +++ P ++ IV EL LMGG
Sbjct: 32 LREVRLALLEADVNFKVVKDFIAKVKERAVGQDVMKSFTPGMVVIDIVNKELTDLMGGTH 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L A PTVI++ GLQG GKTT S KLA L+KQ +LVA D+YRPAAI QL +L
Sbjct: 92 TKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKMLQKQNHKPLLVACDIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ G +V P +IAK GL+ AK N D VIVDTAGRL ID+A+MDELK+V+
Sbjct: 152 GDQLKVPVFSMGDQVSPVEIAKNGLQFAKDNNNDYVIVDTAGRLHIDEALMDELKNVREA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQ+A + +F+ ++ +TG +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 VGPHETLLVVDAMTGQDAVNVAESFHKQLELTGVVLTKLDGDTRGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+M+ LEPFYP+RMA RILGMGD+L+ +EKAQ + + A+EM++K+ +A F F+
Sbjct: 272 FAAMGEKMDALEPFYPERMASRILGMGDMLTLIEKAQAGIDADKAKEMERKMRNAEFTFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V ++G + +++ M+PG GK+ + ++ +K + +EA++++MT EE+ KPE
Sbjct: 332 DFLEQMEQVKKLGPLDQLLDMLPGAGKMKGMKDLKVDDKQMGRVEAIVKSMTKEEKRKPE 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALK 419
++ + RRKR+A SG + Q V++L+ Q MR MK G+M ++ + L K
Sbjct: 392 IINAN--RRKRIALGSGNSVQDVNRLLKQFEDMRKMMKQFSGMMNPKAMKNMKKLGKGFK 449
>gi|256820615|ref|YP_003141894.1| signal recognition particle protein [Capnocytophaga ochracea DSM
7271]
gi|315223725|ref|ZP_07865575.1| signal recognition particle protein [Capnocytophaga ochracea F0287]
gi|420158534|ref|ZP_14665351.1| signal recognition particle protein [Capnocytophaga ochracea str.
Holt 25]
gi|256582198|gb|ACU93333.1| signal recognition particle protein [Capnocytophaga ochracea DSM
7271]
gi|314946300|gb|EFS98299.1| signal recognition particle protein [Capnocytophaga ochracea F0287]
gi|394763650|gb|EJF45731.1| signal recognition particle protein [Capnocytophaga ochracea str.
Holt 25]
Length = 442
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/390 (51%), Positives = 280/390 (71%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL+ADV+ + + F V E+A+G ++ ++P Q +VKIV+DEL +LMGG+
Sbjct: 31 LKEVRRALLDADVNYKIAKDFTNNVKEKALGQQVLTTLQPGQLMVKIVKDELTQLMGGDA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTVIL++GLQG GKTT S KLANYLK K+ K +LVA DVYRPAAIDQL I
Sbjct: 91 AGVNLS-GNPTVILMSGLQGSGKTTFSGKLANYLKNKRNKKPLLVACDVYRPAAIDQLHI 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGVPV++ P IAK+G++ AK+ +++VVIVDTAGRL +D+ MM E+ ++ +
Sbjct: 150 VGEQVGVPVFSDKGNNNPVDIAKKGVQYAKENHLNVVIVDTAGRLAVDEQMMTEISNIHK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
LNP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+++K V KPI
Sbjct: 210 ALNPQETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAITIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ ++ FYPDRMA RILGMGDV+S VE+AQE +E A ++QKKI F F
Sbjct: 270 KFVGTGEKMDAIDVFYPDRMADRILGMGDVVSLVERAQEQFDEEQARKLQKKIAKNQFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +MTP+ER P
Sbjct: 330 DDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHSMTPKERNTPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
++ + R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 389 IIDLN--RKKRIAKGSGRDIQEVNQLMKQF 416
>gi|427394186|ref|ZP_18887688.1| signal recognition particle protein [Alloiococcus otitis ATCC
51267]
gi|425730174|gb|EKU93017.1| signal recognition particle protein [Alloiococcus otitis ATCC
51267]
Length = 499
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/412 (48%), Positives = 287/412 (69%), Gaps = 10/412 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VVR FV+ V E+A+G ++ V Q +VKIV DEL LMGG+
Sbjct: 32 MREVRLALLEADVNYKVVREFVKTVREKAIGEEVLDNVDGGQMVVKIVNDELTDLMGGDR 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGK-SCMLVAGDVYRPAAIDQLVI 119
+++ TV ++ GLQG GKTT + KLANYL+K M+VAGDVYRPAAIDQL
Sbjct: 92 QDIITNDQGITVYMMTGLQGAGKTTTAGKLANYLRKHKNMKPMMVAGDVYRPAAIDQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+++ +PV++ G +V P +IA+QG++ AK +N +VVI+DTAGRL +D+A+MDEL ++K
Sbjct: 152 IGKELNIPVFSMGDQVSPVEIAEQGIQAAKDQNRNVVIIDTAGRLHVDQALMDELANIKS 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E+ LVVDAMTGQ+A + FN ++ I+ ILTKLDGD+RGGAALS+ +++ KPI
Sbjct: 212 AVDPEEIFLVVDAMTGQDAVNVADAFNDQLDISSVILTKLDGDTRGGAALSISKITNKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ L+PFYPDRMA RILGMGD+L+ VEKAQ+ M ++ A E+ K+ +DF
Sbjct: 272 KFTGTGEKLDALDPFYPDRMANRILGMGDILTLVEKAQQDMDEKRARELADKMADQTYDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDF++Q + MG M +I MIPGM ++ P + +K L M+A++++MT EER
Sbjct: 332 NDFIEQMDQMRNMGPMEDIIKMIPGMNQL-PGLDDFQVDDKDLDRMKAIVQSMTMEERRN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 409
P++L+++ RR+R+A SG+ V +L+ Q Q R LMG M G +P
Sbjct: 391 PDMLSQN--RRRRIAAGSGRPLADVHKLIKQFKQSR----ELMGKMSKGKMP 436
>gi|421238897|ref|ZP_15695463.1| signal recognition particle protein [Streptococcus pneumoniae
2071247]
gi|421245173|ref|ZP_15701672.1| signal recognition particle protein [Streptococcus pneumoniae
2081685]
gi|395601334|gb|EJG61482.1| signal recognition particle protein [Streptococcus pneumoniae
2071247]
gi|395608609|gb|EJG68702.1| signal recognition particle protein [Streptococcus pneumoniae
2081685]
Length = 523
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKMDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|307706752|ref|ZP_07643557.1| signal recognition particle protein [Streptococcus mitis SK321]
gi|307617837|gb|EFN96999.1| signal recognition particle protein [Streptococcus mitis SK321]
Length = 523
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|393779012|ref|ZP_10367268.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
412 str. F0487]
gi|420150558|ref|ZP_14657715.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
335 str. F0486]
gi|429746642|ref|ZP_19279981.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
380 str. F0488]
gi|429756689|ref|ZP_19289274.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
324 str. F0483]
gi|392611092|gb|EIW93845.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
412 str. F0487]
gi|394751650|gb|EJF35395.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
335 str. F0486]
gi|429165764|gb|EKY07800.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
380 str. F0488]
gi|429170816|gb|EKY12477.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
324 str. F0483]
Length = 443
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/390 (51%), Positives = 280/390 (71%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL+ADV+ + + F V E+A+G ++ ++P Q +VKIV+DEL +LMGG+
Sbjct: 31 LKEVRRALLDADVNYKIAKDFTNNVKEKALGQQVLTTLQPGQLMVKIVKDELTQLMGGDA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTVIL++GLQG GKTT S KLANYLK K+ K +LVA DVYRPAAIDQL I
Sbjct: 91 AGVNLS-GNPTVILMSGLQGSGKTTFSGKLANYLKNKRNKKPLLVACDVYRPAAIDQLHI 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGVPV++ P IAK+G++ AK+ +++VVIVDTAGRL +D+ MM E+ ++ +
Sbjct: 150 VGEQVGVPVFSDKGNNNPVDIAKKGVQYAKENHLNVVIVDTAGRLAVDEQMMTEISNIHK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
LNP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+++K V KPI
Sbjct: 210 ALNPQETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAITIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ ++ FYPDRMA RILGMGDV+S VE+AQE +E A ++QKKI F F
Sbjct: 270 KFVGTGEKMDAIDVFYPDRMADRILGMGDVVSLVERAQEQFDEEQARKLQKKIAKNQFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +MTP+ER P
Sbjct: 330 DDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHSMTPKERNTPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
++ + R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 389 IIDLN--RKKRIAKGSGRDIQEVNQLMKQF 416
>gi|419442690|ref|ZP_13982718.1| signal recognition particle protein [Streptococcus pneumoniae
GA13224]
gi|379551991|gb|EHZ17082.1| signal recognition particle protein [Streptococcus pneumoniae
GA13224]
Length = 523
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|374997111|ref|YP_004972610.1| signal recognition particle protein [Desulfosporosinus orientis DSM
765]
gi|357215477|gb|AET70095.1| signal recognition particle protein [Desulfosporosinus orientis DSM
765]
Length = 453
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/399 (50%), Positives = 284/399 (71%), Gaps = 4/399 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+ +G ++ + P QQ++KIV +E+++LMGG
Sbjct: 31 MREVRVALLEADVNFKVVKDFVAKVKERCIGQEVLESLSPAQQVIKIVHEEMIELMGGAS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+++ A PTVILL GLQG GKTT +AKLAN LKKQGK +LVA D+YRPAAI QL +L
Sbjct: 91 GKILIASKPPTVILLLGLQGAGKTTHAAKLANMLKKQGKHPLLVACDIYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV++ G E P++IA+ + A + DVVI+DTAGRL I++ +M EL+++K
Sbjct: 151 GEQIKVPVFSMGHE-DPTKIAQASIVHANQNGQDVVIIDTAGRLHINEELMTELREIKSA 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGG ALS+K V+G IK
Sbjct: 210 VKPHEILLVVDAMTGQDAVNVAQSFHSELGLDGVILTKLDGDTRGGGALSIKAVTGCTIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M+ +E F+PDRMA RILGMGDVL+ +EKAQE Q+ A+EM++K+ F +
Sbjct: 270 FVGIGEKMDAIEAFHPDRMASRILGMGDVLTLIEKAQESFDQKKAKEMEEKLRKHEFTLD 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG +S ++ MIPG+GK V+ EK +EA+I +MT EER KP +
Sbjct: 330 DFLDQMQQMKKMGPLSSILEMIPGVGK-QLKDVQIDEKDTARVEAIIRSMTKEERRKPVI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ +S R+KR+A+ SG + Q V +L+ Q QM+ MK
Sbjct: 389 IKDS--RKKRIAKGSGTSVQDVGRLIKQFEQMQKMMKQF 425
>gi|331269654|ref|YP_004396146.1| signal recognition particle protein [Clostridium botulinum
BKT015925]
gi|329126204|gb|AEB76149.1| signal recognition particle protein [Clostridium botulinum
BKT015925]
Length = 451
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/388 (50%), Positives = 281/388 (72%), Gaps = 2/388 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ +VR FV+ E+ +G +++ + P QQ+VKIV DEL +LMG
Sbjct: 32 MREVKLALLEADVNYKIVRNFVKTTGEKCLGEEVMKSLTPGQQVVKIVNDELKELMGSTE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ F+ + TVI+L GLQG GKTT++ KLA L+K K +LVA D+YRPAAI QL ++
Sbjct: 92 SKIEFSSTGLTVIMLVGLQGAGKTTMAGKLALQLRKNNKKPLLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ +PV++ G +V P IAK +E AK +VVI+DTAGRL ID+A+MDEL+++K
Sbjct: 152 GNQIDIPVFSMGDKVNPVDIAKASIEHAKNNKNNVVIIDTAGRLHIDEALMDELENIKTS 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + TFN ++ I+G ILTKLDGD+RGGAALS+K V+GKPIK
Sbjct: 212 VEPNEILLVVDSMTGQDAVNVSETFNNKLDISGVILTKLDGDTRGGAALSIKAVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M DLE F+PDRMA RILGMGDVLS +EKAQE + +E A+E+ K+++ F+
Sbjct: 272 YVGLGEKMNDLEVFHPDRMASRILGMGDVLSLIEKAQEAIDEEKAKELGDKMLNLEFNLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF + + +MG ++++I M+PG+ ++ + EK L +EAMI++MT +ER+ P
Sbjct: 332 DFKESMAQMKKMGPLTKLIEMMPGVNSKQLQGLDLSNGEKELTKIEAMIDSMTLKERKDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLV 386
+++ SP R++R+A SG QQV++L+
Sbjct: 392 SVVSNSPSRKRRIANGSGCNVQQVNKLL 419
>gi|307704985|ref|ZP_07641872.1| signal recognition particle protein [Streptococcus mitis SK597]
gi|307621436|gb|EFO00486.1| signal recognition particle protein [Streptococcus mitis SK597]
Length = 523
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|149012344|ref|ZP_01833413.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP19-BS75]
gi|169832782|ref|YP_001694736.1| signal recognition particle protein [Streptococcus pneumoniae
Hungary19A-6]
gi|225854751|ref|YP_002736263.1| signal recognition particle protein [Streptococcus pneumoniae JJA]
gi|303261607|ref|ZP_07347554.1| signal recognition particle protein [Streptococcus pneumoniae
SP14-BS292]
gi|303267279|ref|ZP_07353142.1| signal recognition particle protein [Streptococcus pneumoniae
BS457]
gi|303268434|ref|ZP_07354229.1| signal recognition particle protein [Streptococcus pneumoniae
BS458]
gi|387759487|ref|YP_006066465.1| signal recognition particle protein [Streptococcus pneumoniae
INV200]
gi|418096377|ref|ZP_12733490.1| signal recognition particle protein [Streptococcus pneumoniae
GA16531]
gi|418139654|ref|ZP_12776480.1| signal recognition particle protein [Streptococcus pneumoniae
GA13338]
gi|418148686|ref|ZP_12785451.1| signal recognition particle protein [Streptococcus pneumoniae
GA13856]
gi|418160014|ref|ZP_12796713.1| signal recognition particle protein [Streptococcus pneumoniae
GA17227]
gi|418180682|ref|ZP_12817252.1| signal recognition particle protein [Streptococcus pneumoniae
GA41688]
gi|418182902|ref|ZP_12819462.1| signal recognition particle protein [Streptococcus pneumoniae
GA43380]
gi|418200008|ref|ZP_12836453.1| signal recognition particle protein [Streptococcus pneumoniae
GA47976]
gi|419514852|ref|ZP_14054477.1| signal recognition particle protein [Streptococcus pneumoniae
England14-9]
gi|419521248|ref|ZP_14060843.1| signal recognition particle protein [Streptococcus pneumoniae
GA05245]
gi|421220436|ref|ZP_15677280.1| signal recognition particle protein [Streptococcus pneumoniae
2070425]
gi|421222746|ref|ZP_15679532.1| signal recognition particle protein [Streptococcus pneumoniae
2070531]
gi|421296167|ref|ZP_15746878.1| signal recognition particle protein [Streptococcus pneumoniae
GA58581]
gi|147763670|gb|EDK70605.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP19-BS75]
gi|168995284|gb|ACA35896.1| signal recognition particle protein [Streptococcus pneumoniae
Hungary19A-6]
gi|225723340|gb|ACO19193.1| signal recognition particle protein [Streptococcus pneumoniae JJA]
gi|301802076|emb|CBW34809.1| signal recognition particle protein [Streptococcus pneumoniae
INV200]
gi|302637187|gb|EFL67675.1| signal recognition particle protein [Streptococcus pneumoniae
SP14-BS292]
gi|302642040|gb|EFL72392.1| signal recognition particle protein [Streptococcus pneumoniae
BS458]
gi|302643206|gb|EFL73490.1| signal recognition particle protein [Streptococcus pneumoniae
BS457]
gi|353769381|gb|EHD49899.1| signal recognition particle protein [Streptococcus pneumoniae
GA16531]
gi|353813361|gb|EHD93594.1| signal recognition particle protein [Streptococcus pneumoniae
GA13856]
gi|353821747|gb|EHE01923.1| signal recognition particle protein [Streptococcus pneumoniae
GA17227]
gi|353845384|gb|EHE25426.1| signal recognition particle protein [Streptococcus pneumoniae
GA41688]
gi|353849043|gb|EHE29053.1| signal recognition particle protein [Streptococcus pneumoniae
GA43380]
gi|353865055|gb|EHE44964.1| signal recognition particle protein [Streptococcus pneumoniae
GA47976]
gi|353905127|gb|EHE80566.1| signal recognition particle protein [Streptococcus pneumoniae
GA13338]
gi|379538548|gb|EHZ03728.1| signal recognition particle protein [Streptococcus pneumoniae
GA05245]
gi|379635401|gb|EHZ99959.1| signal recognition particle protein [Streptococcus pneumoniae
England14-9]
gi|395587552|gb|EJG47899.1| signal recognition particle protein [Streptococcus pneumoniae
2070425]
gi|395587808|gb|EJG48150.1| signal recognition particle protein [Streptococcus pneumoniae
2070531]
gi|395896040|gb|EJH07008.1| signal recognition particle protein [Streptococcus pneumoniae
GA58581]
Length = 523
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|15901147|ref|NP_345751.1| signal recognition particle protein [Streptococcus pneumoniae
TIGR4]
gi|111658514|ref|ZP_01409180.1| hypothetical protein SpneT_02000341 [Streptococcus pneumoniae
TIGR4]
gi|148989312|ref|ZP_01820692.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP6-BS73]
gi|148998927|ref|ZP_01826362.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|149002661|ref|ZP_01827593.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS69]
gi|168487456|ref|ZP_02711964.1| signal recognition particle protein [Streptococcus pneumoniae
CDC1087-00]
gi|168491206|ref|ZP_02715349.1| signal recognition particle protein [Streptococcus pneumoniae
CDC0288-04]
gi|168493207|ref|ZP_02717350.1| signal recognition particle protein [Streptococcus pneumoniae
CDC3059-06]
gi|168575742|ref|ZP_02721657.1| signal recognition particle protein [Streptococcus pneumoniae
MLV-016]
gi|221231975|ref|YP_002511127.1| signal recognition particle protein [Streptococcus pneumoniae ATCC
700669]
gi|225859083|ref|YP_002740593.1| signal recognition particle protein [Streptococcus pneumoniae
70585]
gi|237649986|ref|ZP_04524238.1| signal recognition particle protein [Streptococcus pneumoniae CCRI
1974]
gi|237821108|ref|ZP_04596953.1| signal recognition particle protein [Streptococcus pneumoniae CCRI
1974M2]
gi|307067936|ref|YP_003876902.1| signal recognition particle GTPase [Streptococcus pneumoniae AP200]
gi|387626577|ref|YP_006062752.1| signal recognition particle protein [Streptococcus pneumoniae
INV104]
gi|415698973|ref|ZP_11457370.1| signal recognition particle protein [Streptococcus pneumoniae
459-5]
gi|415749643|ref|ZP_11477587.1| signal recognition particle protein [Streptococcus pneumoniae SV35]
gi|415752329|ref|ZP_11479440.1| signal recognition particle protein [Streptococcus pneumoniae SV36]
gi|417679247|ref|ZP_12328644.1| signal recognition particle protein [Streptococcus pneumoniae
GA17570]
gi|417694199|ref|ZP_12343387.1| signal recognition particle protein [Streptococcus pneumoniae
GA47901]
gi|418074059|ref|ZP_12711315.1| signal recognition particle protein [Streptococcus pneumoniae
GA11184]
gi|418076430|ref|ZP_12713666.1| signal recognition particle protein [Streptococcus pneumoniae
GA47502]
gi|418078752|ref|ZP_12715975.1| signal recognition particle protein [Streptococcus pneumoniae
4027-06]
gi|418080725|ref|ZP_12717937.1| signal recognition particle protein [Streptococcus pneumoniae
6735-05]
gi|418086987|ref|ZP_12724157.1| signal recognition particle protein [Streptococcus pneumoniae
GA47033]
gi|418089661|ref|ZP_12726817.1| signal recognition particle protein [Streptococcus pneumoniae
GA43265]
gi|418098634|ref|ZP_12735733.1| signal recognition particle protein [Streptococcus pneumoniae
6901-05]
gi|418105354|ref|ZP_12742412.1| signal recognition particle protein [Streptococcus pneumoniae
GA44500]
gi|418114832|ref|ZP_12751820.1| signal recognition particle protein [Streptococcus pneumoniae
5787-06]
gi|418116996|ref|ZP_12753966.1| signal recognition particle protein [Streptococcus pneumoniae
6963-05]
gi|418121327|ref|ZP_12758271.1| signal recognition particle protein [Streptococcus pneumoniae
GA44194]
gi|418123542|ref|ZP_12760475.1| signal recognition particle protein [Streptococcus pneumoniae
GA44378]
gi|418128127|ref|ZP_12765022.1| signal recognition particle protein [Streptococcus pneumoniae
NP170]
gi|418130445|ref|ZP_12767328.1| signal recognition particle protein [Streptococcus pneumoniae
GA07643]
gi|418135326|ref|ZP_12772182.1| signal recognition particle protein [Streptococcus pneumoniae
GA11426]
gi|418137312|ref|ZP_12774152.1| signal recognition particle protein [Streptococcus pneumoniae
GA11663]
gi|418144126|ref|ZP_12780926.1| signal recognition particle protein [Streptococcus pneumoniae
GA13494]
gi|418173647|ref|ZP_12810260.1| signal recognition particle protein [Streptococcus pneumoniae
GA41277]
gi|418178302|ref|ZP_12814886.1| signal recognition particle protein [Streptococcus pneumoniae
GA41565]
gi|418185094|ref|ZP_12821638.1| signal recognition particle protein [Streptococcus pneumoniae
GA47283]
gi|418187293|ref|ZP_12823819.1| signal recognition particle protein [Streptococcus pneumoniae
GA47360]
gi|418189519|ref|ZP_12826034.1| signal recognition particle protein [Streptococcus pneumoniae
GA47373]
gi|418193898|ref|ZP_12830389.1| signal recognition particle protein [Streptococcus pneumoniae
GA47439]
gi|418202524|ref|ZP_12838954.1| signal recognition particle protein [Streptococcus pneumoniae
GA52306]
gi|418216716|ref|ZP_12843439.1| signal recognition particle protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|418230027|ref|ZP_12856630.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP01]
gi|419434387|ref|ZP_13974504.1| signal recognition particle protein [Streptococcus pneumoniae
GA40183]
gi|419440491|ref|ZP_13980539.1| signal recognition particle protein [Streptococcus pneumoniae
GA40410]
gi|419455667|ref|ZP_13995625.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP04]
gi|419457671|ref|ZP_13997615.1| signal recognition particle protein [Streptococcus pneumoniae
GA02254]
gi|419464590|ref|ZP_14004482.1| signal recognition particle protein [Streptococcus pneumoniae
GA04175]
gi|419469124|ref|ZP_14008995.1| signal recognition particle protein [Streptococcus pneumoniae
GA06083]
gi|419471210|ref|ZP_14011069.1| signal recognition particle protein [Streptococcus pneumoniae
GA07914]
gi|419473327|ref|ZP_14013178.1| signal recognition particle protein [Streptococcus pneumoniae
GA13430]
gi|419477943|ref|ZP_14017767.1| signal recognition particle protein [Streptococcus pneumoniae
GA18068]
gi|419482318|ref|ZP_14022109.1| signal recognition particle protein [Streptococcus pneumoniae
GA40563]
gi|419491172|ref|ZP_14030911.1| signal recognition particle protein [Streptococcus pneumoniae
GA47179]
gi|419504064|ref|ZP_14043733.1| signal recognition particle protein [Streptococcus pneumoniae
GA47760]
gi|419509866|ref|ZP_14049510.1| signal recognition particle protein [Streptococcus pneumoniae
NP141]
gi|419530027|ref|ZP_14069558.1| signal recognition particle protein [Streptococcus pneumoniae
GA40028]
gi|419532478|ref|ZP_14071994.1| signal recognition particle protein [Streptococcus pneumoniae
GA47794]
gi|419534761|ref|ZP_14074262.1| signal recognition particle protein [Streptococcus pneumoniae
GA17457]
gi|421211352|ref|ZP_15668335.1| signal recognition particle protein [Streptococcus pneumoniae
2070035]
gi|421213342|ref|ZP_15670299.1| signal recognition particle protein [Streptococcus pneumoniae
2070108]
gi|421215585|ref|ZP_15672506.1| signal recognition particle protein [Streptococcus pneumoniae
2070109]
gi|421232027|ref|ZP_15688670.1| signal recognition particle protein [Streptococcus pneumoniae
2080076]
gi|421234261|ref|ZP_15690881.1| signal recognition particle protein [Streptococcus pneumoniae
2061617]
gi|421243217|ref|ZP_15699736.1| signal recognition particle protein [Streptococcus pneumoniae
2081074]
gi|421247544|ref|ZP_15704030.1| signal recognition particle protein [Streptococcus pneumoniae
2082170]
gi|421249572|ref|ZP_15706030.1| signal recognition particle protein [Streptococcus pneumoniae
2082239]
gi|421270711|ref|ZP_15721566.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR48]
gi|421275004|ref|ZP_15725834.1| signal recognition particle protein [Streptococcus pneumoniae
GA52612]
gi|421279062|ref|ZP_15729869.1| signal recognition particle protein [Streptococcus pneumoniae
GA17301]
gi|421281247|ref|ZP_15732045.1| signal recognition particle protein [Streptococcus pneumoniae
GA04672]
gi|421285241|ref|ZP_15736018.1| signal recognition particle protein [Streptococcus pneumoniae
GA60190]
gi|421289884|ref|ZP_15740635.1| signal recognition particle protein [Streptococcus pneumoniae
GA54354]
gi|421298726|ref|ZP_15749414.1| signal recognition particle protein [Streptococcus pneumoniae
GA60080]
gi|421305204|ref|ZP_15755860.1| signal recognition particle protein [Streptococcus pneumoniae
GA62331]
gi|421307600|ref|ZP_15758243.1| signal recognition particle protein [Streptococcus pneumoniae
GA60132]
gi|421313744|ref|ZP_15764334.1| signal recognition particle protein [Streptococcus pneumoniae
GA47562]
gi|444382017|ref|ZP_21180222.1| signal recognition particle protein [Streptococcus pneumoniae
PCS8106]
gi|444384538|ref|ZP_21182632.1| signal recognition particle protein [Streptococcus pneumoniae
PCS8203]
gi|14972772|gb|AAK75391.1| signal recognition particle protein [Streptococcus pneumoniae
TIGR4]
gi|147755237|gb|EDK62289.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|147759272|gb|EDK66265.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS69]
gi|147925290|gb|EDK76369.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP6-BS73]
gi|183569731|gb|EDT90259.1| signal recognition particle protein [Streptococcus pneumoniae
CDC1087-00]
gi|183574503|gb|EDT95031.1| signal recognition particle protein [Streptococcus pneumoniae
CDC0288-04]
gi|183576649|gb|EDT97177.1| signal recognition particle protein [Streptococcus pneumoniae
CDC3059-06]
gi|183578377|gb|EDT98905.1| signal recognition particle protein [Streptococcus pneumoniae
MLV-016]
gi|220674435|emb|CAR68988.1| signal recognition particle protein [Streptococcus pneumoniae ATCC
700669]
gi|225720844|gb|ACO16698.1| signal recognition particle protein [Streptococcus pneumoniae
70585]
gi|301794362|emb|CBW36790.1| signal recognition particle protein [Streptococcus pneumoniae
INV104]
gi|306409473|gb|ADM84900.1| Signal recognition particle GTPase [Streptococcus pneumoniae AP200]
gi|332073626|gb|EGI84105.1| signal recognition particle protein [Streptococcus pneumoniae
GA17570]
gi|332203136|gb|EGJ17204.1| signal recognition particle protein [Streptococcus pneumoniae
GA47901]
gi|353747943|gb|EHD28599.1| signal recognition particle protein [Streptococcus pneumoniae
4027-06]
gi|353749131|gb|EHD29781.1| signal recognition particle protein [Streptococcus pneumoniae
GA47502]
gi|353749559|gb|EHD30203.1| signal recognition particle protein [Streptococcus pneumoniae
GA11184]
gi|353753265|gb|EHD33889.1| signal recognition particle protein [Streptococcus pneumoniae
6735-05]
gi|353759248|gb|EHD39834.1| signal recognition particle protein [Streptococcus pneumoniae
GA47033]
gi|353761659|gb|EHD42225.1| signal recognition particle protein [Streptococcus pneumoniae
GA43265]
gi|353769994|gb|EHD50510.1| signal recognition particle protein [Streptococcus pneumoniae
6901-05]
gi|353777419|gb|EHD57892.1| signal recognition particle protein [Streptococcus pneumoniae
GA44500]
gi|353786345|gb|EHD66758.1| signal recognition particle protein [Streptococcus pneumoniae
5787-06]
gi|353789357|gb|EHD69752.1| signal recognition particle protein [Streptococcus pneumoniae
6963-05]
gi|353793229|gb|EHD73598.1| signal recognition particle protein [Streptococcus pneumoniae
GA44194]
gi|353796888|gb|EHD77226.1| signal recognition particle protein [Streptococcus pneumoniae
GA44378]
gi|353799558|gb|EHD79876.1| signal recognition particle protein [Streptococcus pneumoniae
NP170]
gi|353801769|gb|EHD82069.1| signal recognition particle protein [Streptococcus pneumoniae
GA07643]
gi|353809867|gb|EHD90127.1| signal recognition particle protein [Streptococcus pneumoniae
GA13494]
gi|353838464|gb|EHE18542.1| signal recognition particle protein [Streptococcus pneumoniae
GA41277]
gi|353845076|gb|EHE25119.1| signal recognition particle protein [Streptococcus pneumoniae
GA41565]
gi|353849413|gb|EHE29419.1| signal recognition particle protein [Streptococcus pneumoniae
GA47283]
gi|353851449|gb|EHE31444.1| signal recognition particle protein [Streptococcus pneumoniae
GA47360]
gi|353856661|gb|EHE36630.1| signal recognition particle protein [Streptococcus pneumoniae
GA47373]
gi|353859118|gb|EHE39073.1| signal recognition particle protein [Streptococcus pneumoniae
GA47439]
gi|353868327|gb|EHE48217.1| signal recognition particle protein [Streptococcus pneumoniae
GA52306]
gi|353872308|gb|EHE52174.1| signal recognition particle protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|353887549|gb|EHE67327.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP01]
gi|353901303|gb|EHE76847.1| signal recognition particle protein [Streptococcus pneumoniae
GA11663]
gi|353901474|gb|EHE77016.1| signal recognition particle protein [Streptococcus pneumoniae
GA11426]
gi|379531544|gb|EHY96778.1| signal recognition particle protein [Streptococcus pneumoniae
GA02254]
gi|379537624|gb|EHZ02806.1| signal recognition particle protein [Streptococcus pneumoniae
GA04175]
gi|379545926|gb|EHZ11065.1| signal recognition particle protein [Streptococcus pneumoniae
GA07914]
gi|379547227|gb|EHZ12365.1| signal recognition particle protein [Streptococcus pneumoniae
GA06083]
gi|379552834|gb|EHZ17923.1| signal recognition particle protein [Streptococcus pneumoniae
GA13430]
gi|379564109|gb|EHZ29106.1| signal recognition particle protein [Streptococcus pneumoniae
GA17457]
gi|379565379|gb|EHZ30371.1| signal recognition particle protein [Streptococcus pneumoniae
GA18068]
gi|379574767|gb|EHZ39705.1| signal recognition particle protein [Streptococcus pneumoniae
GA40028]
gi|379575771|gb|EHZ40701.1| signal recognition particle protein [Streptococcus pneumoniae
GA40183]
gi|379578631|gb|EHZ43540.1| signal recognition particle protein [Streptococcus pneumoniae
GA40410]
gi|379579858|gb|EHZ44755.1| signal recognition particle protein [Streptococcus pneumoniae
GA40563]
gi|379593308|gb|EHZ58121.1| signal recognition particle protein [Streptococcus pneumoniae
GA47179]
gi|379606262|gb|EHZ71011.1| signal recognition particle protein [Streptococcus pneumoniae
GA47794]
gi|379606741|gb|EHZ71488.1| signal recognition particle protein [Streptococcus pneumoniae
GA47760]
gi|379628801|gb|EHZ93403.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP04]
gi|379633059|gb|EHZ97628.1| signal recognition particle protein [Streptococcus pneumoniae
NP141]
gi|381310025|gb|EIC50858.1| signal recognition particle protein [Streptococcus pneumoniae SV36]
gi|381316497|gb|EIC57245.1| signal recognition particle protein [Streptococcus pneumoniae
459-5]
gi|381317937|gb|EIC58662.1| signal recognition particle protein [Streptococcus pneumoniae SV35]
gi|395573310|gb|EJG33901.1| signal recognition particle protein [Streptococcus pneumoniae
2070035]
gi|395579574|gb|EJG40072.1| signal recognition particle protein [Streptococcus pneumoniae
2070108]
gi|395579792|gb|EJG40287.1| signal recognition particle protein [Streptococcus pneumoniae
2070109]
gi|395595656|gb|EJG55886.1| signal recognition particle protein [Streptococcus pneumoniae
2080076]
gi|395601209|gb|EJG61358.1| signal recognition particle protein [Streptococcus pneumoniae
2061617]
gi|395608805|gb|EJG68897.1| signal recognition particle protein [Streptococcus pneumoniae
2081074]
gi|395613916|gb|EJG73941.1| signal recognition particle protein [Streptococcus pneumoniae
2082239]
gi|395614365|gb|EJG74386.1| signal recognition particle protein [Streptococcus pneumoniae
2082170]
gi|395867840|gb|EJG78960.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR48]
gi|395874115|gb|EJG85203.1| signal recognition particle protein [Streptococcus pneumoniae
GA52612]
gi|395879674|gb|EJG90731.1| signal recognition particle protein [Streptococcus pneumoniae
GA17301]
gi|395882408|gb|EJG93455.1| signal recognition particle protein [Streptococcus pneumoniae
GA04672]
gi|395887220|gb|EJG98235.1| signal recognition particle protein [Streptococcus pneumoniae
GA60190]
gi|395889125|gb|EJH00136.1| signal recognition particle protein [Streptococcus pneumoniae
GA54354]
gi|395902682|gb|EJH13615.1| signal recognition particle protein [Streptococcus pneumoniae
GA60080]
gi|395905866|gb|EJH16771.1| signal recognition particle protein [Streptococcus pneumoniae
GA62331]
gi|395907513|gb|EJH18404.1| signal recognition particle protein [Streptococcus pneumoniae
GA60132]
gi|395914244|gb|EJH25088.1| signal recognition particle protein [Streptococcus pneumoniae
GA47562]
gi|444252298|gb|ELU58762.1| signal recognition particle protein [Streptococcus pneumoniae
PCS8203]
gi|444253616|gb|ELU60071.1| signal recognition particle protein [Streptococcus pneumoniae
PCS8106]
Length = 523
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|418977558|ref|ZP_13525374.1| signal recognition particle protein [Streptococcus mitis SK575]
gi|383349745|gb|EID27667.1| signal recognition particle protein [Streptococcus mitis SK575]
Length = 523
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|417934365|ref|ZP_12577685.1| signal recognition particle protein [Streptococcus mitis bv. 2 str.
F0392]
gi|340770935|gb|EGR93450.1| signal recognition particle protein [Streptococcus mitis bv. 2 str.
F0392]
Length = 523
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFIEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|289168093|ref|YP_003446362.1| signal recognition particle protein Ffh [Streptococcus mitis B6]
gi|288907660|emb|CBJ22497.1| signal recognition particle protein Ffh [Streptococcus mitis B6]
Length = 523
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FAGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|418323809|ref|ZP_12935071.1| signal recognition particle protein [Staphylococcus pettenkoferi
VCU012]
gi|365229155|gb|EHM70318.1| signal recognition particle protein [Staphylococcus pettenkoferi
VCU012]
Length = 455
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/401 (47%), Positives = 295/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VS++A+G +++ + P QQ++KIV+DEL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKNFVKTVSDRALGSDVMKSLTPGQQVIKIVQDELTQLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + A PTV+++ GLQG GKTT + KLA + KK K +LVA D+YRPAAIDQL
Sbjct: 92 ATIQMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAADIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +V+P I ++ AK++++D VI+DTAGRL +D+A+M+EL++VK
Sbjct: 152 VGKQLDIPVYSEGDQVQPQDIVDHAIQHAKEEHLDFVIIDTAGRLHVDEALMNELQEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E++LVVDAMTGQ+A + +F+ ++ ++ LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 VSKPNEIMLVVDAMTGQDAVNVAESFDNQLDVSSVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LEPF+P+RMA RILGMGDVLS +EKAQ+ + +E A++++KK+ +++F
Sbjct: 272 KFVGMSEKLDGLEPFHPERMASRILGMGDVLSLIEKAQQDVDEEKAKDLEKKMRTSSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ERE P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPTERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+L S R+KR+A+ SG+T Q+V++L+ Q +M+ MK
Sbjct: 392 AVLNVS--RKKRIAKGSGRTLQEVNRLMKQFNEMKKMMKQF 430
>gi|418906172|ref|ZP_13460199.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377765472|gb|EHT89322.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus CIGC345D]
Length = 455
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTQLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAI+QL
Sbjct: 92 TSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI L+ AK++++D VI+DTAGRL ID+A+M+ELK+VK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 IAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPVERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|225860882|ref|YP_002742391.1| signal recognition particle protein [Streptococcus pneumoniae
Taiwan19F-14]
gi|298230784|ref|ZP_06964465.1| signal recognition particle protein [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298254274|ref|ZP_06977860.1| signal recognition particle protein [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298502715|ref|YP_003724655.1| signal recognition particle protein [Streptococcus pneumoniae
TCH8431/19A]
gi|387788081|ref|YP_006253149.1| signal recognition particle protein [Streptococcus pneumoniae
ST556]
gi|418083186|ref|ZP_12720385.1| signal recognition particle protein [Streptococcus pneumoniae
GA44288]
gi|418085327|ref|ZP_12722509.1| signal recognition particle protein [Streptococcus pneumoniae
GA47281]
gi|418100317|ref|ZP_12737405.1| signal recognition particle protein [Streptococcus pneumoniae
7286-06]
gi|418119991|ref|ZP_12756942.1| signal recognition particle protein [Streptococcus pneumoniae
GA18523]
gi|418141847|ref|ZP_12778660.1| signal recognition particle protein [Streptococcus pneumoniae
GA13455]
gi|418150745|ref|ZP_12787492.1| signal recognition particle protein [Streptococcus pneumoniae
GA14798]
gi|418153004|ref|ZP_12789743.1| signal recognition particle protein [Streptococcus pneumoniae
GA16121]
gi|418157241|ref|ZP_12793957.1| signal recognition particle protein [Streptococcus pneumoniae
GA16833]
gi|418171136|ref|ZP_12807763.1| signal recognition particle protein [Streptococcus pneumoniae
GA19451]
gi|418195493|ref|ZP_12831973.1| signal recognition particle protein [Streptococcus pneumoniae
GA47688]
gi|418198091|ref|ZP_12834551.1| signal recognition particle protein [Streptococcus pneumoniae
GA47778]
gi|418223322|ref|ZP_12849963.1| signal recognition particle protein [Streptococcus pneumoniae
5185-06]
gi|419425283|ref|ZP_13965480.1| signal recognition particle protein [Streptococcus pneumoniae
7533-05]
gi|419427233|ref|ZP_13967416.1| signal recognition particle protein [Streptococcus pneumoniae
5652-06]
gi|419429411|ref|ZP_13969578.1| signal recognition particle protein [Streptococcus pneumoniae
GA11856]
gi|419436128|ref|ZP_13976218.1| signal recognition particle protein [Streptococcus pneumoniae
8190-05]
gi|419444532|ref|ZP_13984547.1| signal recognition particle protein [Streptococcus pneumoniae
GA19923]
gi|419446663|ref|ZP_13986668.1| signal recognition particle protein [Streptococcus pneumoniae
7879-04]
gi|419448892|ref|ZP_13988889.1| signal recognition particle protein [Streptococcus pneumoniae
4075-00]
gi|419451595|ref|ZP_13991581.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP02]
gi|419501991|ref|ZP_14041675.1| signal recognition particle protein [Streptococcus pneumoniae
GA47628]
gi|419519049|ref|ZP_14058655.1| signal recognition particle protein [Streptococcus pneumoniae
GA08825]
gi|419528669|ref|ZP_14068211.1| signal recognition particle protein [Streptococcus pneumoniae
GA17719]
gi|421287407|ref|ZP_15738173.1| signal recognition particle protein [Streptococcus pneumoniae
GA58771]
gi|225728379|gb|ACO24230.1| signal recognition particle protein [Streptococcus pneumoniae
Taiwan19F-14]
gi|298238310|gb|ADI69441.1| signal recognition particle protein [Streptococcus pneumoniae
TCH8431/19A]
gi|353755262|gb|EHD35867.1| signal recognition particle protein [Streptococcus pneumoniae
GA44288]
gi|353757282|gb|EHD37876.1| signal recognition particle protein [Streptococcus pneumoniae
GA47281]
gi|353773026|gb|EHD53525.1| signal recognition particle protein [Streptococcus pneumoniae
7286-06]
gi|353789104|gb|EHD69500.1| signal recognition particle protein [Streptococcus pneumoniae
GA18523]
gi|353806098|gb|EHD86372.1| signal recognition particle protein [Streptococcus pneumoniae
GA13455]
gi|353814628|gb|EHD94851.1| signal recognition particle protein [Streptococcus pneumoniae
GA14798]
gi|353817555|gb|EHD97757.1| signal recognition particle protein [Streptococcus pneumoniae
GA16121]
gi|353823689|gb|EHE03863.1| signal recognition particle protein [Streptococcus pneumoniae
GA16833]
gi|353837306|gb|EHE17392.1| signal recognition particle protein [Streptococcus pneumoniae
GA19451]
gi|353862020|gb|EHE41953.1| signal recognition particle protein [Streptococcus pneumoniae
GA47688]
gi|353862729|gb|EHE42659.1| signal recognition particle protein [Streptococcus pneumoniae
GA47778]
gi|353879448|gb|EHE59274.1| signal recognition particle protein [Streptococcus pneumoniae
5185-06]
gi|379137823|gb|AFC94614.1| signal recognition particle protein [Streptococcus pneumoniae
ST556]
gi|379551359|gb|EHZ16454.1| signal recognition particle protein [Streptococcus pneumoniae
GA11856]
gi|379564692|gb|EHZ29688.1| signal recognition particle protein [Streptococcus pneumoniae
GA17719]
gi|379572225|gb|EHZ37182.1| signal recognition particle protein [Streptococcus pneumoniae
GA19923]
gi|379600204|gb|EHZ64985.1| signal recognition particle protein [Streptococcus pneumoniae
GA47628]
gi|379614203|gb|EHZ78913.1| signal recognition particle protein [Streptococcus pneumoniae
7879-04]
gi|379615148|gb|EHZ79857.1| signal recognition particle protein [Streptococcus pneumoniae
8190-05]
gi|379618686|gb|EHZ83361.1| signal recognition particle protein [Streptococcus pneumoniae
5652-06]
gi|379619720|gb|EHZ84390.1| signal recognition particle protein [Streptococcus pneumoniae
7533-05]
gi|379623300|gb|EHZ87934.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP02]
gi|379623950|gb|EHZ88583.1| signal recognition particle protein [Streptococcus pneumoniae
4075-00]
gi|379640886|gb|EIA05424.1| signal recognition particle protein [Streptococcus pneumoniae
GA08825]
gi|395889816|gb|EJH00823.1| signal recognition particle protein [Streptococcus pneumoniae
GA58771]
Length = 523
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPNRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|223043736|ref|ZP_03613779.1| signal recognition particle protein [Staphylococcus capitis SK14]
gi|417907136|ref|ZP_12550912.1| signal recognition particle protein [Staphylococcus capitis VCU116]
gi|222442833|gb|EEE48935.1| signal recognition particle protein [Staphylococcus capitis SK14]
gi|341596767|gb|EGS39358.1| signal recognition particle protein [Staphylococcus capitis VCU116]
Length = 455
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 295/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VS++A+G +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFVKTVSDRALGSDVMQSLTPGQQVIKIVQEELTSLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + A PTV+++ GLQG GKTT + KLA + KK K MLVAGD+YRPAAIDQL
Sbjct: 92 TSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAGDIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +V+P QI + L+ AK++++D VI+DTAGRL ID+A+M+EL++VK
Sbjct: 152 VGKQIDIPVYSEGDQVQPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNELQEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ISKPDEIMLVVDAMTGQDAVNVAQSFDDQLDVSGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRDSSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP+ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPKERSNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 ETLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|424714677|ref|YP_007015392.1| Signal recognition particle protein [Listeria monocytogenes
serotype 4b str. LL195]
gi|424013861|emb|CCO64401.1| Signal recognition particle protein [Listeria monocytogenes
serotype 4b str. LL195]
Length = 451
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 33 MREVRLALLEADVNFKVVKQFIKTVSERAVGADVMKSLTPGQQVIKIVQEELTSLMGGEE 92
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 93 SKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 152
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDELK VK
Sbjct: 153 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDELKQVKE 212
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 213 IATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPI 272
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ +
Sbjct: 273 KFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKDNSMTL 332
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT E++ P
Sbjct: 333 DDFLEQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKNEKDNP 392
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 393 DIINAS--RRKRIARGSGRPVQEINRLLKQFGEMKKMMKQM 431
>gi|339009345|ref|ZP_08641917.1| signal recognition particle protein [Brevibacillus laterosporus LMG
15441]
gi|338773823|gb|EGP33354.1| signal recognition particle protein [Brevibacillus laterosporus LMG
15441]
Length = 480
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/423 (47%), Positives = 291/423 (68%), Gaps = 12/423 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++FV + E+AVG +++ + P Q ++K+V +EL +LMGG V
Sbjct: 32 MREVRLALLEADVNFKVVKQFVARIKERAVGQDVLKSLTPGQMVIKVVNEELTELMGGNV 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L + PTVI++ GLQG GKTT + KLA L+KQ + MLVA D+YRPAAI QL +L
Sbjct: 92 SKLAVSNRPPTVIMMVGLQGAGKTTTTGKLAKLLQKQNRKPMLVACDIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ PV+ G +V P +IA + +E AK+ + D VI+DTAGRL ID+ +M+EL+ V+ V
Sbjct: 152 GEQLSAPVFAMGDQVSPVEIATKAIEHAKENHYDYVILDTAGRLHIDETLMEELQQVREV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAMTGQ+A + +FN ++ +TG ILTKLDGD+RGGAALSVK V+GKPIK
Sbjct: 212 AKPDEILLVVDAMTGQDAVNVAESFNNQLELTGVILTKLDGDTRGGAALSVKAVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ LEPF+PDRMA RILGMGDVLS +EKAQE + + A+EM++++ F F+
Sbjct: 272 FAAMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQESVDVDKAKEMERQMRQGEFTFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
FL + + ++G + ++GM+PGM K+ + ++ EK + EA++++MT EER P+
Sbjct: 332 MFLDSMQQMRQLGPLEDLLGMLPGMNKMKGMKDLKVDEKQIARTEAIVKSMTKEERANPD 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME---------GGSLPA 410
++ + RRKR+A SG T Q+V++ + Q M+ MK G+ + GG P
Sbjct: 392 IMNAN--RRKRIAAGSGTTIQEVNRFIKQFEDMKKMMKQFTGMTDKMKKKSKKKGGFFPF 449
Query: 411 LSN 413
N
Sbjct: 450 KGN 452
>gi|358464807|ref|ZP_09174765.1| signal recognition particle protein [Streptococcus sp. oral taxon
058 str. F0407]
gi|357066336|gb|EHI76486.1| signal recognition particle protein [Streptococcus sp. oral taxon
058 str. F0407]
Length = 523
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFIEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|417848493|ref|ZP_12494438.1| signal recognition particle protein [Streptococcus mitis SK1073]
gi|339452707|gb|EGP65330.1| signal recognition particle protein [Streptococcus mitis SK1073]
Length = 523
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|319939112|ref|ZP_08013476.1| signal recognition particle GTPase [Streptococcus anginosus
1_2_62CV]
gi|319812162|gb|EFW08428.1| signal recognition particle GTPase [Streptococcus anginosus
1_2_62CV]
Length = 516
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/409 (49%), Positives = 289/409 (70%), Gaps = 13/409 (3%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ G +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEGARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFSLGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEERE 356
DF+ Q V MG M ++ MIPGM PA +V E E + K A++ +MTP ERE
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSMTPTERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 390 NPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQVMQ---GVMSG 433
>gi|419495553|ref|ZP_14035271.1| signal recognition particle protein [Streptococcus pneumoniae
GA47461]
gi|421206749|ref|ZP_15663804.1| signal recognition particle protein [Streptococcus pneumoniae
2090008]
gi|421229925|ref|ZP_15686592.1| signal recognition particle protein [Streptococcus pneumoniae
2061376]
gi|421292199|ref|ZP_15742934.1| signal recognition particle protein [Streptococcus pneumoniae
GA56348]
gi|421303453|ref|ZP_15754117.1| signal recognition particle protein [Streptococcus pneumoniae
GA17484]
gi|421312131|ref|ZP_15762734.1| signal recognition particle protein [Streptococcus pneumoniae
GA58981]
gi|379595635|gb|EHZ60443.1| signal recognition particle protein [Streptococcus pneumoniae
GA47461]
gi|395575546|gb|EJG36114.1| signal recognition particle protein [Streptococcus pneumoniae
2090008]
gi|395594457|gb|EJG54693.1| signal recognition particle protein [Streptococcus pneumoniae
2061376]
gi|395892327|gb|EJH03318.1| signal recognition particle protein [Streptococcus pneumoniae
GA56348]
gi|395902075|gb|EJH13011.1| signal recognition particle protein [Streptococcus pneumoniae
GA17484]
gi|395910560|gb|EJH21432.1| signal recognition particle protein [Streptococcus pneumoniae
GA58981]
Length = 523
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKVL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|147678059|ref|YP_001212274.1| signal recognition particle GTPase [Pelotomaculum thermopropionicum
SI]
gi|146274156|dbj|BAF59905.1| signal recognition particle GTPase [Pelotomaculum thermopropionicum
SI]
Length = 450
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/426 (49%), Positives = 284/426 (66%), Gaps = 14/426 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VV+ F+ + E+AVG LI + P Q +VK+V ELV LMGG
Sbjct: 32 LREVRMALLEADVNFKVVKDFIARIKEKAVGQELIESLNPAQHVVKVVHGELVALMGGSN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ A PTVI++ GL G GKTT SAKLANYL+KQG+ +LVA DVYRPAA+ QL +L
Sbjct: 92 SKINMAPKPPTVIMMVGLNGAGKTTTSAKLANYLRKQGRRPLLVAADVYRPAAVKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+G+PV+ GT +P I E A DVVI+DTAGR ++++ +M EL+ +K
Sbjct: 152 GEQLGIPVFADGTGKEPVSIGLAAAESAVTGGRDVVIIDTAGRQEVNEELMAELEAMKEA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVDAMTGQ A + TFN +G+ G ILTKLDGD+RGGAALSV+ V+GKPIK
Sbjct: 212 IRPHEVLLVVDAMTGQAAVGVAETFNSRLGLDGVILTKLDGDTRGGAALSVRAVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++ LEPF+PDRMA RILGMGDVL+ +EKAQE E MQKKI S F
Sbjct: 272 FAGLGEKLDALEPFHPDRMAERILGMGDVLTLIEKAQENFNAEQMARMQKKIRSMEFTLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V ++G + +++ MIPG+G I + ++ EK L +EA+I +MTPEER PE
Sbjct: 332 DFLEQLTQVKKLGPLEQILSMIPGLGGIKKLKDIQVDEKELVYVEAIIRSMTPEERRDPE 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALK 419
+ R++R+A+ SG + Q+V++L+ Q Q + MK + ++E ALK
Sbjct: 392 RVLNGS-RKRRIAKGSGTSVQEVNRLLKQFEQTKKMMKQFV------------DMEKALK 438
Query: 420 SEQKAP 425
K P
Sbjct: 439 KSGKMP 444
>gi|225856949|ref|YP_002738460.1| signal recognition particle protein [Streptococcus pneumoniae
P1031]
gi|444388157|ref|ZP_21186147.1| signal recognition particle protein [Streptococcus pneumoniae
PCS125219]
gi|444389599|ref|ZP_21187514.1| signal recognition particle protein [Streptococcus pneumoniae
PCS70012]
gi|444391435|ref|ZP_21189266.1| signal recognition particle protein [Streptococcus pneumoniae
PCS81218]
gi|444395136|ref|ZP_21192682.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0002]
gi|444397742|ref|ZP_21195225.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0006]
gi|444400272|ref|ZP_21197683.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0007]
gi|444402805|ref|ZP_21199956.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0008]
gi|444405746|ref|ZP_21202601.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0009]
gi|444407359|ref|ZP_21204026.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0010]
gi|444410666|ref|ZP_21207190.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0076]
gi|444413067|ref|ZP_21209383.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0153]
gi|444414317|ref|ZP_21210599.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0199]
gi|444417461|ref|ZP_21213498.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0360]
gi|444419251|ref|ZP_21215129.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0427]
gi|444422413|ref|ZP_21218069.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0446]
gi|225725114|gb|ACO20966.1| signal recognition particle protein [Streptococcus pneumoniae
P1031]
gi|444250307|gb|ELU56788.1| signal recognition particle protein [Streptococcus pneumoniae
PCS125219]
gi|444256062|gb|ELU62400.1| signal recognition particle protein [Streptococcus pneumoniae
PCS70012]
gi|444258455|gb|ELU64777.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0002]
gi|444260399|gb|ELU66707.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0006]
gi|444265804|gb|ELU71793.1| signal recognition particle protein [Streptococcus pneumoniae
PCS81218]
gi|444265854|gb|ELU71840.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0008]
gi|444266821|gb|ELU72753.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0007]
gi|444270955|gb|ELU76706.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0010]
gi|444272373|gb|ELU78090.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0009]
gi|444273226|gb|ELU78899.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0153]
gi|444276885|gb|ELU82417.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0076]
gi|444282616|gb|ELU87869.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0199]
gi|444283732|gb|ELU88918.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0360]
gi|444287298|gb|ELU92231.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0427]
gi|444288242|gb|ELU93140.1| signal recognition particle protein [Streptococcus pneumoniae
PNI0446]
Length = 523
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 NLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|126698849|ref|YP_001087746.1| signal recognition particle protein [Clostridium difficile 630]
gi|115250286|emb|CAJ68108.1| Signal recognition particle protein [Clostridium difficile 630]
Length = 450
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/403 (48%), Positives = 281/403 (69%), Gaps = 4/403 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F++ V E+ VG +++ + P Q ++KIV +EL LMG
Sbjct: 32 MREVKLALLEADVNFKVVKDFIKKVQERCVGQEVMQSLTPAQHVIKIVNEELTSLMGDVQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+++ + PT++++ GLQG GKTT + KL Y KKQGK +LVA D+YRPAAI QL ++
Sbjct: 92 SKVMISSKPPTILMMVGLQGAGKTTTAGKLGGYFKKQGKKPLLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE++ +PV+ G + P IAK GL A K D+VI+DTAGRL ID+ +MDELK +K
Sbjct: 152 GEKLDIPVFNMGDKENPVNIAKAGLNHAIKNANDLVIIDTAGRLHIDEVLMDELKSIKSE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAALSIRAVTQKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E+++KI DF
Sbjct: 272 FMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELEQKIKKQELDFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+Q + MG + +++GMIPGMG + V K +K +A+I++MT ER P
Sbjct: 332 DFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAIIQSMTTYERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S R+KR+A+ SG + Q V++L+ QL +M+ MK G
Sbjct: 392 GVLNAS--RKKRIAKGSGTSVQDVNRLIKQLNEMKKMMKMFAG 432
>gi|405760752|ref|YP_006701348.1| signal recognition particle protein [Streptococcus pneumoniae
SPNA45]
gi|404277641|emb|CCM08183.1| signal recognition particle protein [Streptococcus pneumoniae
SPNA45]
Length = 523
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|417940238|ref|ZP_12583526.1| signal recognition particle protein [Streptococcus oralis SK313]
gi|343389119|gb|EGV01704.1| signal recognition particle protein [Streptococcus oralis SK313]
Length = 523
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|34540847|ref|NP_905326.1| signal recognition particle protein [Porphyromonas gingivalis W83]
gi|334146894|ref|YP_004509823.1| signal recognition particle protein [Porphyromonas gingivalis
TDC60]
gi|419969944|ref|ZP_14485463.1| signal recognition particle protein [Porphyromonas gingivalis W50]
gi|34397161|gb|AAQ66225.1| signal recognition particle protein [Porphyromonas gingivalis W83]
gi|333804050|dbj|BAK25257.1| signal recognition particle protein [Porphyromonas gingivalis
TDC60]
gi|392611883|gb|EIW94605.1| signal recognition particle protein [Porphyromonas gingivalis W50]
Length = 445
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/412 (50%), Positives = 281/412 (68%), Gaps = 6/412 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V ++F V E+A+G ++ VRP + +VKIV DEL LMGG
Sbjct: 31 LKDVRRALLDADVNYVVAKQFTDLVKEKAIGQNVLTSVRPGELMVKIVHDELAALMGGHS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
++ K P VIL++GLQG GKTT S KLAN LK KQGK +LVA DVYRPAAI QL+I
Sbjct: 91 VDINL-KGSPAVILMSGLQGSGKTTFSGKLANMLKSKQGKRPLLVACDVYRPAAIQQLMI 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+GVPVY+ KP +IA+ + EAK K DVVI+DTAGRL ID+ MM E++ +K
Sbjct: 150 LGEQLGVPVYSEPDSKKPVEIARHAIAEAKTKGNDVVIIDTAGRLAIDEEMMREIEAIKA 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AIQPNEVLFVVDSMTGQDAVNTAKEFNTRLDFDGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME ++ F+P+RMA RILGMGD++S VE+AQE + +A ++++KI FDF
Sbjct: 270 KFVGTGEKMEAIDAFHPERMADRILGMGDIVSLVERAQEQYDEREARKLEEKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP ER P
Sbjct: 330 NDFLAQIHQIKKMGNLKELASMIPGVGKAI-KDIDIDDDAFKSIEAIIYSMTPHERTHPS 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
+L + RRKR+A SG + Q V++L+ Q Q R MK + G +GG +P +
Sbjct: 389 IL--NGQRRKRIAMGSGTSIQDVNKLITQFDQTRKMMKTIQG-FKGGKMPKM 437
>gi|229031475|ref|ZP_04187475.1| Signal recognition particle protein [Bacillus cereus AH1271]
gi|229174511|ref|ZP_04302043.1| Signal recognition particle protein [Bacillus cereus MM3]
gi|423401313|ref|ZP_17378486.1| signal recognition particle protein [Bacillus cereus BAG2X1-2]
gi|423457972|ref|ZP_17434769.1| signal recognition particle protein [Bacillus cereus BAG5X2-1]
gi|423477983|ref|ZP_17454698.1| signal recognition particle protein [Bacillus cereus BAG6X1-1]
gi|228609071|gb|EEK66361.1| Signal recognition particle protein [Bacillus cereus MM3]
gi|228729764|gb|EEL80744.1| Signal recognition particle protein [Bacillus cereus AH1271]
gi|401148356|gb|EJQ55849.1| signal recognition particle protein [Bacillus cereus BAG5X2-1]
gi|401654303|gb|EJS71846.1| signal recognition particle protein [Bacillus cereus BAG2X1-2]
gi|402428145|gb|EJV60242.1| signal recognition particle protein [Bacillus cereus BAG6X1-1]
Length = 449
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/406 (49%), Positives = 293/406 (72%), Gaps = 8/406 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG ++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVSERAVGQDVMTSLTPGQQVIKVVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVANRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMDELAKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKLERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 390 QPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|357042601|ref|ZP_09104305.1| signal recognition particle protein [Prevotella histicola F0411]
gi|355369252|gb|EHG16650.1| signal recognition particle protein [Prevotella histicola F0411]
Length = 447
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/402 (50%), Positives = 281/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKTFTDTVKQKALGMNVLTAVKPGQLMVKIVHDELAELMGGES 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L A +RP +IL++GLQG GKTT + KLA+ LK K+ K+ +LVA DVYRPAAIDQL +
Sbjct: 91 VGLNLA-NRPAIILMSGLQGSGKTTFTGKLAHLLKTKEHKNPLLVACDVYRPAAIDQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGVPVY+ ++IA L EAK K DVVI+DTAGRL +D+ MM+E++ +K
Sbjct: 150 VGEQVGVPVYSEPDNKNVNEIADHALAEAKAKGNDVVIIDTAGRLAVDEEMMNEIESLKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 HVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
LL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 389 LLNNS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|29376252|ref|NP_815406.1| signal recognition particle protein [Enterococcus faecalis V583]
gi|227518889|ref|ZP_03948938.1| signal recognition particle protein [Enterococcus faecalis TX0104]
gi|256762629|ref|ZP_05503209.1| signal recognition particle protein [Enterococcus faecalis T3]
gi|256961798|ref|ZP_05565969.1| signal recognition particle protein [Enterococcus faecalis Merz96]
gi|256964995|ref|ZP_05569166.1| signal recognition particle protein [Enterococcus faecalis
HIP11704]
gi|257419425|ref|ZP_05596419.1| signal recognition particle protein [Enterococcus faecalis T11]
gi|293382861|ref|ZP_06628779.1| signal recognition particle protein [Enterococcus faecalis R712]
gi|293389652|ref|ZP_06634107.1| signal recognition particle protein [Enterococcus faecalis S613]
gi|307273091|ref|ZP_07554337.1| signal recognition particle protein [Enterococcus faecalis TX0855]
gi|312907668|ref|ZP_07766659.1| signal recognition particle protein [Enterococcus faecalis DAPTO
512]
gi|312910285|ref|ZP_07769132.1| signal recognition particle protein [Enterococcus faecalis DAPTO
516]
gi|384513375|ref|YP_005708468.1| signal recognition particle protein [Enterococcus faecalis OG1RF]
gi|422714488|ref|ZP_16771214.1| signal recognition particle protein [Enterococcus faecalis TX0309A]
gi|422715746|ref|ZP_16772462.1| signal recognition particle protein [Enterococcus faecalis TX0309B]
gi|424676631|ref|ZP_18113502.1| signal recognition particle protein [Enterococcus faecalis ERV103]
gi|424681553|ref|ZP_18118340.1| signal recognition particle protein [Enterococcus faecalis ERV116]
gi|424683743|ref|ZP_18120493.1| signal recognition particle protein [Enterococcus faecalis ERV129]
gi|424686353|ref|ZP_18123021.1| signal recognition particle protein [Enterococcus faecalis ERV25]
gi|424690375|ref|ZP_18126910.1| signal recognition particle protein [Enterococcus faecalis ERV31]
gi|424695468|ref|ZP_18131851.1| signal recognition particle protein [Enterococcus faecalis ERV37]
gi|424696793|ref|ZP_18133134.1| signal recognition particle protein [Enterococcus faecalis ERV41]
gi|424699821|ref|ZP_18136032.1| signal recognition particle protein [Enterococcus faecalis ERV62]
gi|424703166|ref|ZP_18139300.1| signal recognition particle protein [Enterococcus faecalis ERV63]
gi|424707337|ref|ZP_18143321.1| signal recognition particle protein [Enterococcus faecalis ERV65]
gi|424717003|ref|ZP_18146301.1| signal recognition particle protein [Enterococcus faecalis ERV68]
gi|424720581|ref|ZP_18149682.1| signal recognition particle protein [Enterococcus faecalis ERV72]
gi|424724129|ref|ZP_18153078.1| signal recognition particle protein [Enterococcus faecalis ERV73]
gi|424733720|ref|ZP_18162275.1| signal recognition particle protein [Enterococcus faecalis ERV81]
gi|424743981|ref|ZP_18172286.1| signal recognition particle protein [Enterococcus faecalis ERV85]
gi|424750511|ref|ZP_18178575.1| signal recognition particle protein [Enterococcus faecalis ERV93]
gi|430360637|ref|ZP_19426358.1| signal recognition particle protein [Enterococcus faecalis OG1X]
gi|430370543|ref|ZP_19429068.1| signal recognition particle protein [Enterococcus faecalis M7]
gi|29343715|gb|AAO81476.1| signal recognition particle protein [Enterococcus faecalis V583]
gi|227073680|gb|EEI11643.1| signal recognition particle protein [Enterococcus faecalis TX0104]
gi|256683880|gb|EEU23575.1| signal recognition particle protein [Enterococcus faecalis T3]
gi|256952294|gb|EEU68926.1| signal recognition particle protein [Enterococcus faecalis Merz96]
gi|256955491|gb|EEU72123.1| signal recognition particle protein [Enterococcus faecalis
HIP11704]
gi|257161253|gb|EEU91213.1| signal recognition particle protein [Enterococcus faecalis T11]
gi|291079526|gb|EFE16890.1| signal recognition particle protein [Enterococcus faecalis R712]
gi|291081045|gb|EFE18008.1| signal recognition particle protein [Enterococcus faecalis S613]
gi|306510076|gb|EFM79100.1| signal recognition particle protein [Enterococcus faecalis TX0855]
gi|310626696|gb|EFQ09979.1| signal recognition particle protein [Enterococcus faecalis DAPTO
512]
gi|311289558|gb|EFQ68114.1| signal recognition particle protein [Enterococcus faecalis DAPTO
516]
gi|315576091|gb|EFU88282.1| signal recognition particle protein [Enterococcus faecalis TX0309B]
gi|315580665|gb|EFU92856.1| signal recognition particle protein [Enterococcus faecalis TX0309A]
gi|327535264|gb|AEA94098.1| signal recognition particle protein [Enterococcus faecalis OG1RF]
gi|402351260|gb|EJU86152.1| signal recognition particle protein [Enterococcus faecalis ERV116]
gi|402356251|gb|EJU90985.1| signal recognition particle protein [Enterococcus faecalis ERV103]
gi|402364502|gb|EJU98938.1| signal recognition particle protein [Enterococcus faecalis ERV31]
gi|402364741|gb|EJU99176.1| signal recognition particle protein [Enterococcus faecalis ERV129]
gi|402367207|gb|EJV01548.1| signal recognition particle protein [Enterococcus faecalis ERV25]
gi|402368406|gb|EJV02722.1| signal recognition particle protein [Enterococcus faecalis ERV37]
gi|402375750|gb|EJV09730.1| signal recognition particle protein [Enterococcus faecalis ERV62]
gi|402377122|gb|EJV11033.1| signal recognition particle protein [Enterococcus faecalis ERV41]
gi|402384935|gb|EJV18476.1| signal recognition particle protein [Enterococcus faecalis ERV65]
gi|402385171|gb|EJV18711.1| signal recognition particle protein [Enterococcus faecalis ERV63]
gi|402386351|gb|EJV19857.1| signal recognition particle protein [Enterococcus faecalis ERV68]
gi|402391050|gb|EJV24366.1| signal recognition particle protein [Enterococcus faecalis ERV81]
gi|402393052|gb|EJV26282.1| signal recognition particle protein [Enterococcus faecalis ERV72]
gi|402395863|gb|EJV28944.1| signal recognition particle protein [Enterococcus faecalis ERV73]
gi|402399657|gb|EJV32523.1| signal recognition particle protein [Enterococcus faecalis ERV85]
gi|402406489|gb|EJV39039.1| signal recognition particle protein [Enterococcus faecalis ERV93]
gi|429512752|gb|ELA02349.1| signal recognition particle protein [Enterococcus faecalis OG1X]
gi|429515307|gb|ELA04823.1| signal recognition particle protein [Enterococcus faecalis M7]
Length = 472
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/401 (50%), Positives = 287/401 (71%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+AVGV ++ + P QQ+VKIV +EL K +G E
Sbjct: 32 MREIRLALLEADVNLQVVKDFTKRVRERAVGVEVLESLSPAQQIVKIVDEELTKTLGSET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAIDQL +
Sbjct: 92 VELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAIDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDELK +K
Sbjct: 152 LGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V+G PI
Sbjct: 212 LADPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAALSIRAVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+ +FDF
Sbjct: 272 KFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP ERE P
Sbjct: 332 NDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 392 DLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESKKMMQQM 430
>gi|255100269|ref|ZP_05329246.1| signal recognition particle protein [Clostridium difficile
QCD-63q42]
gi|255306209|ref|ZP_05350381.1| signal recognition particle protein [Clostridium difficile ATCC
43255]
gi|423082359|ref|ZP_17070951.1| signal recognition particle protein [Clostridium difficile
002-P50-2011]
gi|423087751|ref|ZP_17076137.1| signal recognition particle protein [Clostridium difficile
050-P50-2011]
gi|357544065|gb|EHJ26071.1| signal recognition particle protein [Clostridium difficile
050-P50-2011]
gi|357548685|gb|EHJ30545.1| signal recognition particle protein [Clostridium difficile
002-P50-2011]
Length = 450
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/403 (48%), Positives = 281/403 (69%), Gaps = 4/403 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F++ V E+ VG +++ + P Q ++KIV +EL LMG
Sbjct: 32 MREVKLALLEADVNFKVVKDFIKKVQERCVGQEVMQSLTPAQHVIKIVNEELTSLMGDVQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+++ + PT++++ GLQG GKTT + KL Y KKQGK +LVA D+YRPAAI QL ++
Sbjct: 92 SKVMISSKPPTILMMVGLQGAGKTTTAGKLGGYFKKQGKKPLLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE++ +PV+ G + P IAK GL A K D+VI+DTAGRL ID+ +MDELK +K
Sbjct: 152 GEKLDIPVFNMGDKENPVNIAKAGLSHAIKNANDLVIIDTAGRLHIDEVLMDELKSIKSE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAALSIRAVTQKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E+++KI DF
Sbjct: 272 FMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELEQKIKKQELDFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+Q + MG + +++GMIPGMG + V K +K +A+I++MT ER P
Sbjct: 332 DFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAIIQSMTTYERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S R+KR+A+ SG + Q V++L+ QL +M+ MK G
Sbjct: 392 GVLNAS--RKKRIAKGSGTSVQDVNRLIKQLNEMKKMMKMFAG 432
>gi|307708829|ref|ZP_07645291.1| signal recognition particle protein [Streptococcus mitis NCTC
12261]
gi|307615195|gb|EFN94406.1| signal recognition particle protein [Streptococcus mitis NCTC
12261]
Length = 523
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVDIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNTQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|116873236|ref|YP_850017.1| signal recognition particle protein [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116742114|emb|CAK21238.1| signal recognition particle protein [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 450
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIKTVSERAVGADVMKSLTPGQQVIKIVQEELTSLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDELK VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K V GE+ME +E F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ +
Sbjct: 272 KFVATGEKMEAIETFHPDRMASRILGMGDVLSLIEKAQTDVDAEKMKAMEQKMKDNSMTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q + V +MG + ++ M+PG K+ ++ +K L +EA+I++MT E++ P
Sbjct: 332 DDFLEQLQQVKQMGPLDELLKMMPGANKMKGLDNMQVDDKQLGHIEAIIKSMTKNEKDNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 392 DIINAS--RRKRIARGSGRPIQEINRLLKQFAEMKKMMKQM 430
>gi|255026961|ref|ZP_05298947.1| hypothetical protein LmonocytFSL_12638 [Listeria monocytogenes FSL
J2-003]
Length = 450
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 291/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIKKVSERAVGADVMKSLTPGQQVIKIVQEELTSLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDELK VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ +
Sbjct: 272 KFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDAEKMKAMEQKMKDNSMTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT E++ P
Sbjct: 332 DDFLDQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKNEKDNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 392 DIINAS--RRKRIARGSGRPVQEINRLLKQFAEMKKMMKQM 430
>gi|254829203|ref|ZP_05233890.1| signal recognition particle protein [Listeria monocytogenes FSL
N3-165]
gi|290893069|ref|ZP_06556058.1| signal recognition particle protein [Listeria monocytogenes FSL
J2-071]
gi|404408245|ref|YP_006690960.1| signal recognition particle protein [Listeria monocytogenes
SLCC2376]
gi|422809882|ref|ZP_16858293.1| Signal recognition particle, subunit Ffh SRP54 [Listeria
monocytogenes FSL J1-208]
gi|258601615|gb|EEW14940.1| signal recognition particle protein [Listeria monocytogenes FSL
N3-165]
gi|290557429|gb|EFD90954.1| signal recognition particle protein [Listeria monocytogenes FSL
J2-071]
gi|378751546|gb|EHY62134.1| Signal recognition particle, subunit Ffh SRP54 [Listeria
monocytogenes FSL J1-208]
gi|404242394|emb|CBY63794.1| signal recognition particle protein [Listeria monocytogenes
SLCC2376]
Length = 450
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 291/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIKTVSERAVGADVMKSLTPGQQVIKIVQEELTSLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDELK VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ +
Sbjct: 272 KFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDAEKMKAMEQKMKDNSMTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT E++ P
Sbjct: 332 DDFLDQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKNEKDNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 392 DIINAS--RRKRIARGSGRPVQEINRLLKQFAEMKKMMKQM 430
>gi|46908032|ref|YP_014421.1| signal recognition particle protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|47093840|ref|ZP_00231584.1| signal recognition particle protein [Listeria monocytogenes str. 4b
H7858]
gi|226224404|ref|YP_002758511.1| signal recognition particle protein Ffh [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254826157|ref|ZP_05231158.1| signal recognition particle protein [Listeria monocytogenes FSL
J1-194]
gi|254933273|ref|ZP_05266632.1| signal recognition particle protein [Listeria monocytogenes
HPB2262]
gi|254994058|ref|ZP_05276248.1| hypothetical protein LmonocytoFSL_14589 [Listeria monocytogenes FSL
J2-064]
gi|255521154|ref|ZP_05388391.1| hypothetical protein LmonocFSL_08006 [Listeria monocytogenes FSL
J1-175]
gi|300763886|ref|ZP_07073883.1| signal recognition particle protein [Listeria monocytogenes FSL
N1-017]
gi|386732541|ref|YP_006206037.1| signal recognition particle protein [Listeria monocytogenes
07PF0776]
gi|404281413|ref|YP_006682311.1| signal recognition particle protein [Listeria monocytogenes
SLCC2755]
gi|405750152|ref|YP_006673618.1| signal recognition particle protein [Listeria monocytogenes ATCC
19117]
gi|405753027|ref|YP_006676492.1| signal recognition particle protein [Listeria monocytogenes
SLCC2378]
gi|405755961|ref|YP_006679425.1| signal recognition particle protein [Listeria monocytogenes
SLCC2540]
gi|406704584|ref|YP_006754938.1| signal recognition particle protein [Listeria monocytogenes L312]
gi|417315453|ref|ZP_12102129.1| signal recognition particle protein [Listeria monocytogenes J1816]
gi|424823562|ref|ZP_18248575.1| Signal recognition particle [Listeria monocytogenes str. Scott A]
gi|46881302|gb|AAT04598.1| signal recognition particle protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|47017781|gb|EAL08570.1| signal recognition particle protein [Listeria monocytogenes str. 4b
H7858]
gi|225876866|emb|CAS05575.1| Putative signal recognition particle protein Ffh [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|293584833|gb|EFF96865.1| signal recognition particle protein [Listeria monocytogenes
HPB2262]
gi|293595397|gb|EFG03158.1| signal recognition particle protein [Listeria monocytogenes FSL
J1-194]
gi|300515622|gb|EFK42672.1| signal recognition particle protein [Listeria monocytogenes FSL
N1-017]
gi|328466157|gb|EGF37314.1| signal recognition particle protein [Listeria monocytogenes J1816]
gi|332312242|gb|EGJ25337.1| Signal recognition particle [Listeria monocytogenes str. Scott A]
gi|384391299|gb|AFH80369.1| signal recognition particle protein [Listeria monocytogenes
07PF0776]
gi|404219352|emb|CBY70716.1| signal recognition particle protein [Listeria monocytogenes ATCC
19117]
gi|404222227|emb|CBY73590.1| signal recognition particle protein [Listeria monocytogenes
SLCC2378]
gi|404225161|emb|CBY76523.1| signal recognition particle protein [Listeria monocytogenes
SLCC2540]
gi|404228048|emb|CBY49453.1| signal recognition particle protein [Listeria monocytogenes
SLCC2755]
gi|406361614|emb|CBY67887.1| signal recognition particle protein [Listeria monocytogenes L312]
Length = 450
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIKTVSERAVGADVMKSLTPGQQVIKIVQEELTSLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDELK VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ +
Sbjct: 272 KFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKDNSMTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT E++ P
Sbjct: 332 DDFLEQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKNEKDNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 392 DIINAS--RRKRIARGSGRPVQEINRLLKQFGEMKKMMKQM 430
>gi|160892009|ref|ZP_02073012.1| hypothetical protein BACUNI_04468 [Bacteroides uniformis ATCC 8492]
gi|270296343|ref|ZP_06202543.1| signal recognition particle protein [Bacteroides sp. D20]
gi|317480461|ref|ZP_07939556.1| signal recognition particle protein [Bacteroides sp. 4_1_36]
gi|423303310|ref|ZP_17281309.1| signal recognition particle protein [Bacteroides uniformis
CL03T00C23]
gi|423307968|ref|ZP_17285958.1| signal recognition particle protein [Bacteroides uniformis
CL03T12C37]
gi|156858487|gb|EDO51918.1| signal recognition particle protein [Bacteroides uniformis ATCC
8492]
gi|270273747|gb|EFA19609.1| signal recognition particle protein [Bacteroides sp. D20]
gi|316903376|gb|EFV25235.1| signal recognition particle protein [Bacteroides sp. 4_1_36]
gi|392688540|gb|EIY81825.1| signal recognition particle protein [Bacteroides uniformis
CL03T00C23]
gi|392688953|gb|EIY82236.1| signal recognition particle protein [Bacteroides uniformis
CL03T12C37]
Length = 440
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/412 (48%), Positives = 281/412 (68%), Gaps = 5/412 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKNFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
SE+ S+P +IL++GLQG GKTT S KLA LK K+ K +LVA DVYRPAAI+QL +
Sbjct: 91 SEINL-DSKPAIILMSGLQGSGKTTFSGKLARMLKSKKNKKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y+ P IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+ +K+
Sbjct: 150 LAEQIDVPMYSEPDSKNPVAIAQNAIQEAKAKGYDLVIVDTAGRLAVDEEMMNEIAAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPDEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPSRMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEER P
Sbjct: 330 NDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEERSNPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P L
Sbjct: 389 ILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMPKL 438
>gi|296451248|ref|ZP_06892988.1| signal recognition particle protein [Clostridium difficile NAP08]
gi|296880400|ref|ZP_06904363.1| signal recognition particle protein [Clostridium difficile NAP07]
gi|296259854|gb|EFH06709.1| signal recognition particle protein [Clostridium difficile NAP08]
gi|296428641|gb|EFH14525.1| signal recognition particle protein [Clostridium difficile NAP07]
Length = 450
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/403 (48%), Positives = 281/403 (69%), Gaps = 4/403 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F++ V E+ VG +++ + P Q ++KIV +EL LMG
Sbjct: 32 MREVKLALLEADVNFKVVKDFIKKVQERCVGQEVMQSLTPAQHVIKIVNEELTSLMGDVQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+++ + PT++++ GLQG GKTT + KL Y KKQGK +LVA D+YRPAAI QL ++
Sbjct: 92 SKVMISSKPPTILMMVGLQGAGKTTTAGKLGGYFKKQGKKPLLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE++ +PV+ G + P IAK GL A K D+VI+DTAGRL ID+ +MDELK +K
Sbjct: 152 GEKLDIPVFNMGDKENPVNIAKAGLSHAIKNANDLVIIDTAGRLHIDEVLMDELKSIKSE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAALSIRAVTQKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E+++KI DF
Sbjct: 272 FMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELEQKIKKQELDFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+Q + MG + +++GMIPGMG + V K +K +A+I++MT ER P
Sbjct: 332 DFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAIIQSMTTYERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S R+KR+A+ SG + Q V++L+ QL +M+ MK G
Sbjct: 392 GVLNAS--RKKRIARGSGTSVQDVNRLIKQLNEMKKMMKMFAG 432
>gi|401683368|ref|ZP_10815254.1| signal recognition particle protein [Streptococcus sp. BS35b]
gi|400187446|gb|EJO21640.1| signal recognition particle protein [Streptococcus sp. BS35b]
Length = 523
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHDVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEMLLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|257086986|ref|ZP_05581347.1| signal recognition particle protein [Enterococcus faecalis D6]
gi|422721959|ref|ZP_16778536.1| signal recognition particle protein [Enterococcus faecalis TX2137]
gi|424673086|ref|ZP_18110029.1| signal recognition particle protein [Enterococcus faecalis 599]
gi|256995016|gb|EEU82318.1| signal recognition particle protein [Enterococcus faecalis D6]
gi|315027856|gb|EFT39788.1| signal recognition particle protein [Enterococcus faecalis TX2137]
gi|402352896|gb|EJU87732.1| signal recognition particle protein [Enterococcus faecalis 599]
Length = 472
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/401 (50%), Positives = 286/401 (71%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+AVGV ++ + P QQ+VKIV +EL K +G E
Sbjct: 32 MREIRLALLEADVNLQVVKDFTKRVRERAVGVEVLESLSPAQQIVKIVDEELTKTLGSET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAIDQL +
Sbjct: 92 VELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAIDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDELK +K
Sbjct: 152 LGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V+ PI
Sbjct: 212 LANPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAALSIRAVTSAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+ +FDF
Sbjct: 272 KFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP ERE P
Sbjct: 332 NDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 392 DLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESKKMMQQM 430
>gi|418576380|ref|ZP_13140526.1| signal recognition particle [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325442|gb|EHY92574.1| signal recognition particle [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 455
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/401 (47%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VS++A+G +++ + P QQ++KIV++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKTVSDRALGSDVMKSLTPGQQVIKIVQEELTQLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S + A PTV+++ GLQG GKTT + KLA + KK K MLVA D+YRPAAIDQL
Sbjct: 92 STITMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI + ++ AK++++D VI+DTAGRL +D+ +M EL DVK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVENAIKHAKEEHLDFVIIDTAGRLHVDETLMQELSDVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ITKPHEIMLVVDAMTGQDAVNVAQSFDEQLEVSGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LEPF+P+RMA RILGMGDVLS +EKAQ+ + ++ A++++KK+ +++F
Sbjct: 272 KFVGMSEKLDGLEPFHPERMASRILGMGDVLSLIEKAQQDVDEDKAKDLEKKMRTSSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ EK + ++A+I++MTP ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGIDKLNMNEKQIDHIKAIIQSMTPSERNDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 DTLNVS--RKKRIAKGSGRSVQEVNRLMKQFNDMKKMMKQF 430
>gi|253681736|ref|ZP_04862533.1| signal recognition particle protein [Clostridium botulinum D str.
1873]
gi|253561448|gb|EES90900.1| signal recognition particle protein [Clostridium botulinum D str.
1873]
Length = 451
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/388 (50%), Positives = 281/388 (72%), Gaps = 2/388 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ +VR FV+ E+ +G +++ + P QQ+VKIV DEL +LMG
Sbjct: 32 MREVKLALLEADVNYKIVRNFVKTTGEKCLGEEVMKSLTPGQQVVKIVNDELKELMGSTE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ F+ + TVI+L GLQG GKTT++ KLA L+K K +LVA D+YRPAAI QL ++
Sbjct: 92 SKIEFSSTGLTVIMLVGLQGAGKTTMAGKLALQLRKNNKKPLLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ +PV++ G +V P IAK +E AK +VVI+DTAGRL ID+A+MDEL+++K
Sbjct: 152 GSQIDIPVFSMGDKVNPVDIAKASIEHAKNNKNNVVIIDTAGRLHIDEALMDELENIKTS 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + TFN ++ I+G ILTKLDGD+RGGAALS+K V+GKPIK
Sbjct: 212 VKPNEILLVVDSMTGQDAVNVSETFNDKLDISGVILTKLDGDTRGGAALSIKAVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M DLE F+PDRMA RILGMGDVLS +EKAQE + +E A+E+ K+++ F+
Sbjct: 272 YVGLGEKMNDLEVFHPDRMASRILGMGDVLSLIEKAQEAIDEEKAKELGDKMLNLEFNLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF + + +MG ++++I M+PG+ ++ + + EK L +EAMI++MT +ER P
Sbjct: 332 DFKESMAQMKKMGPLTKLIEMMPGVNSKQLQGLDLSKGEKELTKIEAMIDSMTLKERRDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLV 386
+++ SP R++R+A SG QQV++L+
Sbjct: 392 SVVSNSPSRKRRIANGSGCNVQQVNKLL 419
>gi|417312813|ref|ZP_12099525.1| signal recognition particle protein [Streptococcus pneumoniae
GA04375]
gi|418227845|ref|ZP_12854463.1| signal recognition particle protein [Streptococcus pneumoniae
3063-00]
gi|419438363|ref|ZP_13978433.1| signal recognition particle protein [Streptococcus pneumoniae
GA13499]
gi|421236406|ref|ZP_15693004.1| signal recognition particle protein [Streptococcus pneumoniae
2071004]
gi|327389521|gb|EGE87866.1| signal recognition particle protein [Streptococcus pneumoniae
GA04375]
gi|353882073|gb|EHE61885.1| signal recognition particle protein [Streptococcus pneumoniae
3063-00]
gi|379538368|gb|EHZ03549.1| signal recognition particle protein [Streptococcus pneumoniae
GA13499]
gi|395602251|gb|EJG62394.1| signal recognition particle protein [Streptococcus pneumoniae
2071004]
Length = 523
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPNRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|314933415|ref|ZP_07840780.1| signal recognition particle protein [Staphylococcus caprae C87]
gi|313653565|gb|EFS17322.1| signal recognition particle protein [Staphylococcus caprae C87]
Length = 455
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 294/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VS++A+G +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFVKTVSDRALGSDVMQSLTPGQQVIKIVQEELTSLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + A PTV+++ GLQG GKTT + KLA + KK K MLVAGD+YRPAAIDQL
Sbjct: 92 TSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAGDIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +V P QI + L+ AK++++D VI+DTAGRL ID+A+M+EL++VK
Sbjct: 152 VGKQIDIPVYSEGDQVPPQQIVENALQHAKEEHLDFVIIDTAGRLHIDEALMNELQEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ISKPDEIMLVVDAMTGQDAVNVAQSFDDQLDVSGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRDSSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP+ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPKERSNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 ETLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|421490816|ref|ZP_15938183.1| signal recognition particle protein [Streptococcus anginosus
SK1138]
gi|400371813|gb|EJP24762.1| signal recognition particle protein [Streptococcus anginosus
SK1138]
Length = 516
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/409 (49%), Positives = 289/409 (70%), Gaps = 13/409 (3%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ G +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEGARPLMIAADIYRPAAIDQLTTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFSLGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEERE 356
DF+ Q V MG M ++ MIPGM PA +V E E + K A++ +MTP ERE
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVLSMTPTERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 390 NPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQVMQ---GVMSG 433
>gi|418146492|ref|ZP_12783272.1| signal recognition particle protein [Streptococcus pneumoniae
GA13637]
gi|353813700|gb|EHD93928.1| signal recognition particle protein [Streptococcus pneumoniae
GA13637]
Length = 523
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKVL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAADVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|342163605|ref|YP_004768244.1| signal recognition particle protein [Streptococcus pseudopneumoniae
IS7493]
gi|341933487|gb|AEL10384.1| signal recognition particle protein [Streptococcus pseudopneumoniae
IS7493]
Length = 523
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNDQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|423090839|ref|ZP_17079125.1| signal recognition particle protein [Clostridium difficile
70-100-2010]
gi|357555954|gb|EHJ37576.1| signal recognition particle protein [Clostridium difficile
70-100-2010]
Length = 450
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/403 (48%), Positives = 281/403 (69%), Gaps = 4/403 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F++ V E+ VG +++ + P Q ++KIV +EL LMG
Sbjct: 32 MREVKLALLEADVNFKVVKDFIKKVQERCVGQEVMQSLTPAQHVIKIVNEELTSLMGDVQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+++ + PT++++ GLQG GKTT + KL Y KKQGK +LVA D+YRPAAI QL ++
Sbjct: 92 SKVMISSKPPTILMMVGLQGAGKTTTAGKLGGYFKKQGKKPLLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE++ +PV+ G + P IAK GL A K D+VI+DTAGRL ID+ +MDELK +K
Sbjct: 152 GEKLDIPVFNMGDKENPINIAKAGLSHAIKNANDLVIIDTAGRLHIDEVLMDELKSIKSE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAALSIRAVTQKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E+++KI DF
Sbjct: 272 FMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELEQKIKKQELDFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+Q + MG + +++GMIPGMG + V K +K +A+I++MT ER P
Sbjct: 332 DFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAIIQSMTTYERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S R+KR+A+ SG + Q V++L+ QL +M+ MK G
Sbjct: 392 GVLNAS--RKKRIAKGSGTSVQDVNRLIKQLNEMKKMMKMFAG 432
>gi|429765776|ref|ZP_19298056.1| signal recognition particle protein [Clostridium celatum DSM 1785]
gi|429185629|gb|EKY26603.1| signal recognition particle protein [Clostridium celatum DSM 1785]
Length = 449
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 290/401 (72%), Gaps = 2/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ FV+ VSE+ VG ++ + P QQ++KIV +EL LMGG
Sbjct: 32 MREVKLALLEADVNFKVVKTFVKNVSEKCVGSEVLESLTPAQQVIKIVNEELTDLMGGSE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
S++ F+ PTVI+L GLQG GKTT+ KLA L+K + K +LVA D+YRPAAI QL +
Sbjct: 92 SKINFSSVGPTVIMLVGLQGAGKTTMCGKLALQLRKDKNKKPLLVACDIYRPAAIKQLEV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PV+ G ++ P QIAK+G++ A++ +VVI+DTAGRL ID+ +M ELKDVK
Sbjct: 152 VGKQIDIPVFQKGDKINPVQIAKEGIQYARENGNNVVIIDTAGRLHIDEELMTELKDVKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP+E+LLVVD+MTGQ+A + TFN + I+G ILTKLDGD+RGGAALS++ ++ KP+
Sbjct: 212 EVNPSEILLVVDSMTGQDAVNVAETFNEALDISGVILTKLDGDTRGGAALSIRHMTQKPV 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+M D E F+PDRM+ RILGMGDVLS +EKAQE + +++A+E+ +K+M +F +
Sbjct: 272 KFIGVGEKMNDFEVFHPDRMSSRILGMGDVLSLIEKAQEAIDEKEAKELGQKMMENDFTY 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
+D+L + ++GS+S+++ MIPG+ K + EK L + ++I +MTP+ER P
Sbjct: 332 DDYLTAMDQMKKLGSISKLMEMIPGIPKELKDVDFDAGEKELAKVRSIIYSMTPKERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+L+ S R+KR+A+ SG T Q V++L+ MR +MK +
Sbjct: 392 KLIVGSSSRKKRIAKGSGTTLQDVNKLIKGHEVMRKQMKQM 432
>gi|346226274|ref|ZP_08847416.1| signal recognition particle protein [Anaerophaga thermohalophila
DSM 12881]
Length = 443
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/398 (51%), Positives = 277/398 (69%), Gaps = 5/398 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++DIRRALL+ADV+ + F + V E+A+G ++ V+P Q +VKIV DEL +LMG
Sbjct: 31 LKDIRRALLDADVNFKTAKNFTETVKEKALGQNVLTAVKPQQMMVKIVHDELAELMGSSS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+++ K P VIL+AGLQG GKTT S KLA +K K+GK ML+AGDVYRPAAI+QL +
Sbjct: 91 TDINL-KGNPAVILVAGLQGSGKTTFSGKLAYLIKNKRGKHPMLIAGDVYRPAAINQLQV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG Q+ VPVYT P +IAK G++EAK K DVVI+DTAGRL ID+ MMDE+ +K
Sbjct: 150 LGGQISVPVYTEEGNTDPVKIAKAGIKEAKAKGHDVVIIDTAGRLAIDEQMMDEIAAIKD 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAA+S++ V KPI
Sbjct: 210 AVKPHETLFVVDAMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAAISIRSVVDKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ L+ F+P RMA RILGMGD++S VEKAQE E+A+++QKKI F+F
Sbjct: 270 KFVGMGEKMDALDVFHPSRMADRILGMGDIVSLVEKAQEQYDAEEAKKLQKKIAKNQFNF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DF+ Q R + +MG++ + GMIPGMGK+ V + + K +EA+I +MTPEER++P
Sbjct: 330 DDFIGQIRQIKKMGNLKDLAGMIPGMGKMLK-NVDIDDDAFKGVEAIISSMTPEERQQPS 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
++ S RRKR+A SG + Q+V++L+ Q R M+
Sbjct: 389 IINGS--RRKRIAAGSGTSIQEVNRLMKQFEDTRKAMR 424
>gi|322374427|ref|ZP_08048941.1| signal recognition particle protein [Streptococcus sp. C300]
gi|331266505|ref|YP_004326135.1| signal recognition particle protein [Streptococcus oralis Uo5]
gi|406577203|ref|ZP_11052819.1| signal recognition particle protein [Streptococcus sp. GMD6S]
gi|419778920|ref|ZP_14304801.1| signal recognition particle protein [Streptococcus oralis SK10]
gi|321279927|gb|EFX56966.1| signal recognition particle protein [Streptococcus sp. C300]
gi|326683177|emb|CBZ00795.1| signal recognition particle protein [Streptococcus oralis Uo5]
gi|383186684|gb|EIC79149.1| signal recognition particle protein [Streptococcus oralis SK10]
gi|404460210|gb|EKA06486.1| signal recognition particle protein [Streptococcus sp. GMD6S]
Length = 523
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|199597126|ref|ZP_03210558.1| Signal recognition particle GTPase [Lactobacillus rhamnosus HN001]
gi|258508639|ref|YP_003171390.1| signal recognition particle protein [Lactobacillus rhamnosus GG]
gi|385828300|ref|YP_005866072.1| signal recognition particle protein [Lactobacillus rhamnosus GG]
gi|199591930|gb|EDZ00005.1| Signal recognition particle GTPase [Lactobacillus rhamnosus HN001]
gi|257148566|emb|CAR87539.1| Signal recognition particle protein [Lactobacillus rhamnosus GG]
gi|259649945|dbj|BAI42107.1| signal recognition particle protein [Lactobacillus rhamnosus GG]
Length = 478
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/416 (48%), Positives = 288/416 (69%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ F++ V +AVG ++ + P QQ++KIV DELVK MG
Sbjct: 32 MREIRLALLEADVNFDVVKTFIKNVRTKAVGSEVLESLTPAQQIIKIVNDELVKTMGEAA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++AGLQG GKTT KL+ YL + K+ +L+A DVYRPAAIDQL
Sbjct: 92 VPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMENEKARPLLIAADVYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV+ GT+ P +I +QGL AK+ D V++DTAGRLQID+ +M ELK++K
Sbjct: 152 IGKQLNVPVFEMGTDTDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMTELKNIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A+EM +KI +FDF
Sbjct: 272 KFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKTYDEKQAQEMAEKIRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
NDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+ERE P
Sbjct: 332 NDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPKEREDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+ L +P RR+R+A SG+ +V++++ Q Q K +M M G++ L L
Sbjct: 392 DSL--NPSRRRRIAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDGL 441
>gi|16800981|ref|NP_471249.1| hypothetical protein lin1915 [Listeria innocua Clip11262]
gi|423098710|ref|ZP_17086418.1| signal recognition particle protein [Listeria innocua ATCC 33091]
gi|16414416|emb|CAC97145.1| ffh [Listeria innocua Clip11262]
gi|370794537|gb|EHN62300.1| signal recognition particle protein [Listeria innocua ATCC 33091]
Length = 450
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIKTVSERAVGADVMKSLTPGQQVIKIVQEELTSLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDELK VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K V GE+ME +E F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ +
Sbjct: 272 KFVATGEKMEAIETFHPDRMASRILGMGDVLSLIEKAQTDVDAEKMKAMEQKMKDNSMTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q + V +MG + ++ M+PG K+ ++ +K L +EA+I++MT E++ P
Sbjct: 332 DDFLDQLQQVKQMGPLDELLKMMPGANKMKGLDNMQVDDKQLGHIEAIIKSMTKNEKDNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 392 DIINAS--RRKRIARGSGRPIQEINRLLKQFAEMKKMMKQM 430
>gi|436835876|ref|YP_007321092.1| signal recognition particle protein [Fibrella aestuarina BUZ 2]
gi|384067289|emb|CCH00499.1| signal recognition particle protein [Fibrella aestuarina BUZ 2]
Length = 439
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/411 (48%), Positives = 282/411 (68%), Gaps = 4/411 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRAL +ADV+ V + V E+A+ ++ V P Q VKIV++EL LMGGE
Sbjct: 31 VKEVRRALTDADVNYKVAKDVTDRVKEKALDRKVLIAVEPGQLFVKIVQEELTDLMGGE- 89
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++ + K P V+L+AGLQG GKTT S KLA+Y+KKQG++ +LVA D+YRPAAIDQL +L
Sbjct: 90 AQPINLKGDPAVVLIAGLQGSGKTTFSGKLASYIKKQGRNVLLVACDIYRPAAIDQLKVL 149
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQVGV VY+ QIA+ + AKK N +VIVDTAGRL +D+AMM E++ VK+
Sbjct: 150 GEQVGVEVYSEPDNKNAVQIAQNAISHAKKTNKKIVIVDTAGRLAVDEAMMQEIEQVKKA 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP+E L VVD+MTGQ+A TFN + G +LTKLDGD+RGGAALS++ V KPIK
Sbjct: 210 INPSETLFVVDSMTGQDAVNTAKTFNDRLDFDGVVLTKLDGDARGGAALSIRAVVSKPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+ GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ ++A + K+ FDFN
Sbjct: 270 FMSTGEKMEALDVFYPDRMASRILGMGDVISLVERAQQAFDDDEARRINAKMRKNQFDFN 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG++ ++GMIPGMGK+ + S +EA+I +MTP+ERE+P++
Sbjct: 330 DFLSQLQQIKKMGNIKDLLGMIPGMGKMVK-DLDLDNASFAPIEAIISSMTPKERERPDM 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
+ +S R++R+A SG +EQQV+ L+ Q +MR MK + + G L +
Sbjct: 389 IDKS--RKRRIALGSGTSEQQVTNLLKQFDEMRKMMKKMNQMQASGKLAKM 437
>gi|188995069|ref|YP_001929321.1| signal recognition particle protein [Porphyromonas gingivalis ATCC
33277]
gi|188594749|dbj|BAG33724.1| signal recognition particle protein [Porphyromonas gingivalis ATCC
33277]
Length = 445
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/412 (50%), Positives = 281/412 (68%), Gaps = 6/412 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V ++F V E+A+G ++ VRP + +VKIV DEL LMGG
Sbjct: 31 LKDVRRALLDADVNYVVAKQFTDLVKEKAIGQNVLTSVRPGELMVKIVHDELAALMGGHS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
++ K P VIL++GLQG GKTT S KLAN LK KQGK +LVA DVYRPAAI QL+I
Sbjct: 91 VDINL-KGSPAVILMSGLQGSGKTTFSGKLANMLKSKQGKRPLLVACDVYRPAAIQQLMI 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+GVPVY+ KP +IA+ + EAK K DVVI+DTAGRL ID+ MM E++ +K
Sbjct: 150 LGEQLGVPVYSEPDSKKPVEIARHAIAEAKTKGNDVVIIDTAGRLAIDEEMMREIEAIKA 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ + KPI
Sbjct: 210 AIQPNEVLFVVDSMTGQDAVNTAKEFNTRLDFDGVVLTKLDGDTRGGAALSIRSIVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME ++ F+P+RMA RILGMGD++S VE+AQE + +A ++++KI FDF
Sbjct: 270 KFVGTGEKMEAIDAFHPERMADRILGMGDIVSLVERAQEQYDEREARKLEEKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP ER P
Sbjct: 330 NDFLAQIHQIKKMGNLKELASMIPGVGKAI-KDIDIDDDAFKSIEAIIYSMTPHERTHPS 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
+L + RRKR+A SG + Q V++L+ Q Q R MK + G +GG +P +
Sbjct: 389 IL--NGQRRKRIAMGSGTSIQDVNKLITQFDQTRKMMKTIQG-FKGGKMPKM 437
>gi|419780220|ref|ZP_14306070.1| signal recognition particle protein [Streptococcus oralis SK100]
gi|383185379|gb|EIC77875.1| signal recognition particle protein [Streptococcus oralis SK100]
Length = 523
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|418975192|ref|ZP_13523101.1| signal recognition particle protein [Streptococcus oralis SK1074]
gi|383348563|gb|EID26522.1| signal recognition particle protein [Streptococcus oralis SK1074]
Length = 523
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHDVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEMLLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|335031105|ref|ZP_08524560.1| signal recognition particle protein [Streptococcus anginosus SK52 =
DSM 20563]
gi|333770419|gb|EGL47456.1| signal recognition particle protein [Streptococcus anginosus SK52 =
DSM 20563]
Length = 516
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/409 (49%), Positives = 288/409 (70%), Gaps = 13/409 (3%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRMALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEAARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFSLGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +KI FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKIRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEERE 356
DF+ Q V MG M ++ MIPGM PA +V E E + K A++ +MTP ERE
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSMTPAERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 390 NPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQVMQ---GVMSG 433
>gi|27467830|ref|NP_764467.1| ffh protein [Staphylococcus epidermidis ATCC 12228]
gi|251810667|ref|ZP_04825140.1| signal recognition particle protein Ffh [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876331|ref|ZP_06285198.1| signal recognition particle protein [Staphylococcus epidermidis
SK135]
gi|293366798|ref|ZP_06613474.1| signal recognition particle protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417647383|ref|ZP_12297223.1| signal recognition particle protein [Staphylococcus epidermidis
VCU144]
gi|417656653|ref|ZP_12306336.1| signal recognition particle protein [Staphylococcus epidermidis
VCU028]
gi|417658957|ref|ZP_12308570.1| signal recognition particle protein [Staphylococcus epidermidis
VCU045]
gi|417909837|ref|ZP_12553570.1| signal recognition particle protein [Staphylococcus epidermidis
VCU037]
gi|417910876|ref|ZP_12554592.1| signal recognition particle protein [Staphylococcus epidermidis
VCU105]
gi|417913396|ref|ZP_12557063.1| signal recognition particle protein [Staphylococcus epidermidis
VCU109]
gi|418325071|ref|ZP_12936281.1| signal recognition particle protein [Staphylococcus epidermidis
VCU071]
gi|418411657|ref|ZP_12984923.1| signal recognition particle protein [Staphylococcus epidermidis
BVS058A4]
gi|418605396|ref|ZP_13168721.1| signal recognition particle protein [Staphylococcus epidermidis
VCU041]
gi|418606372|ref|ZP_13169653.1| signal recognition particle protein [Staphylococcus epidermidis
VCU057]
gi|418609835|ref|ZP_13172969.1| signal recognition particle protein [Staphylococcus epidermidis
VCU065]
gi|418616590|ref|ZP_13179514.1| signal recognition particle protein [Staphylococcus epidermidis
VCU120]
gi|418622035|ref|ZP_13184791.1| signal recognition particle protein [Staphylococcus epidermidis
VCU123]
gi|418624485|ref|ZP_13187160.1| signal recognition particle protein [Staphylococcus epidermidis
VCU125]
gi|418628905|ref|ZP_13191421.1| signal recognition particle protein [Staphylococcus epidermidis
VCU127]
gi|418664755|ref|ZP_13226221.1| signal recognition particle protein [Staphylococcus epidermidis
VCU081]
gi|419768646|ref|ZP_14294762.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-250]
gi|419772629|ref|ZP_14298660.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-K]
gi|420163425|ref|ZP_14670172.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM095]
gi|420165227|ref|ZP_14671931.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM088]
gi|420167593|ref|ZP_14674245.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM087]
gi|420169780|ref|ZP_14676358.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM070]
gi|420172763|ref|ZP_14679261.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM067]
gi|420182907|ref|ZP_14689040.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM049]
gi|420187558|ref|ZP_14693578.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM039]
gi|420194025|ref|ZP_14699854.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM021]
gi|420197128|ref|ZP_14702852.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM020]
gi|420202049|ref|ZP_14707644.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM018]
gi|420206443|ref|ZP_14711953.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM008]
gi|420209484|ref|ZP_14714921.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM003]
gi|420211872|ref|ZP_14717228.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM001]
gi|420214283|ref|ZP_14719562.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05005]
gi|420216113|ref|ZP_14721335.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05001]
gi|420220018|ref|ZP_14725008.1| signal recognition particle protein [Staphylococcus epidermidis
NIH04008]
gi|420221971|ref|ZP_14726896.1| signal recognition particle protein [Staphylococcus epidermidis
NIH08001]
gi|420224834|ref|ZP_14729672.1| signal recognition particle protein [Staphylococcus epidermidis
NIH06004]
gi|420227028|ref|ZP_14731801.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05003]
gi|420229350|ref|ZP_14734056.1| signal recognition particle protein [Staphylococcus epidermidis
NIH04003]
gi|420231709|ref|ZP_14736354.1| signal recognition particle protein [Staphylococcus epidermidis
NIH051668]
gi|421607261|ref|ZP_16048507.1| signal recognition particle protein [Staphylococcus epidermidis
AU12-03]
gi|27315375|gb|AAO04509.1|AE016747_6 ffh protein [Staphylococcus epidermidis ATCC 12228]
gi|251805827|gb|EES58484.1| signal recognition particle protein Ffh [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295356|gb|EFA87883.1| signal recognition particle protein [Staphylococcus epidermidis
SK135]
gi|291319099|gb|EFE59469.1| signal recognition particle protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329724304|gb|EGG60816.1| signal recognition particle protein [Staphylococcus epidermidis
VCU144]
gi|329736314|gb|EGG72586.1| signal recognition particle protein [Staphylococcus epidermidis
VCU028]
gi|329736596|gb|EGG72862.1| signal recognition particle protein [Staphylococcus epidermidis
VCU045]
gi|341652446|gb|EGS76234.1| signal recognition particle protein [Staphylococcus epidermidis
VCU037]
gi|341655064|gb|EGS78800.1| signal recognition particle protein [Staphylococcus epidermidis
VCU105]
gi|341655678|gb|EGS79402.1| signal recognition particle protein [Staphylococcus epidermidis
VCU109]
gi|365228977|gb|EHM70149.1| signal recognition particle protein [Staphylococcus epidermidis
VCU071]
gi|374402493|gb|EHQ73518.1| signal recognition particle protein [Staphylococcus epidermidis
VCU041]
gi|374406171|gb|EHQ77074.1| signal recognition particle protein [Staphylococcus epidermidis
VCU065]
gi|374408325|gb|EHQ79156.1| signal recognition particle protein [Staphylococcus epidermidis
VCU057]
gi|374410201|gb|EHQ80962.1| signal recognition particle protein [Staphylococcus epidermidis
VCU081]
gi|374820668|gb|EHR84744.1| signal recognition particle protein [Staphylococcus epidermidis
VCU120]
gi|374827410|gb|EHR91272.1| signal recognition particle protein [Staphylococcus epidermidis
VCU123]
gi|374827714|gb|EHR91575.1| signal recognition particle protein [Staphylococcus epidermidis
VCU125]
gi|374834899|gb|EHR98530.1| signal recognition particle protein [Staphylococcus epidermidis
VCU127]
gi|383359256|gb|EID36686.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-K]
gi|383359472|gb|EID36895.1| signal recognition particle protein [Staphylococcus aureus subsp.
aureus IS-250]
gi|394235114|gb|EJD80688.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM095]
gi|394236394|gb|EJD81928.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM088]
gi|394237621|gb|EJD83107.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM087]
gi|394241440|gb|EJD86854.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM067]
gi|394243080|gb|EJD88454.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM070]
gi|394249370|gb|EJD94583.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM049]
gi|394256000|gb|EJE00936.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM039]
gi|394265935|gb|EJE10581.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM020]
gi|394266723|gb|EJE11348.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM021]
gi|394270022|gb|EJE14545.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM018]
gi|394278282|gb|EJE22599.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM008]
gi|394278931|gb|EJE23243.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM003]
gi|394280382|gb|EJE24663.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM001]
gi|394283648|gb|EJE27813.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05005]
gi|394287025|gb|EJE30999.1| signal recognition particle protein [Staphylococcus epidermidis
NIH04008]
gi|394290002|gb|EJE33872.1| signal recognition particle protein [Staphylococcus epidermidis
NIH08001]
gi|394292563|gb|EJE36305.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05001]
gi|394294237|gb|EJE37923.1| signal recognition particle protein [Staphylococcus epidermidis
NIH06004]
gi|394297529|gb|EJE41126.1| signal recognition particle protein [Staphylococcus epidermidis
NIH05003]
gi|394299116|gb|EJE42667.1| signal recognition particle protein [Staphylococcus epidermidis
NIH04003]
gi|394302251|gb|EJE45699.1| signal recognition particle protein [Staphylococcus epidermidis
NIH051668]
gi|406657053|gb|EKC83446.1| signal recognition particle protein [Staphylococcus epidermidis
AU12-03]
gi|410891240|gb|EKS39037.1| signal recognition particle protein [Staphylococcus epidermidis
BVS058A4]
Length = 455
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 294/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+A+G +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFVKTVSERALGSDVMQSLTPGQQVIKIVQEELTSLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + A PTV+++ GLQG GKTT + KLA + KK K +LVAGD+YRPAAIDQL
Sbjct: 92 TSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +V P QI + L+ AK++++D VI+DTAGRL ID+A+M+EL++VK
Sbjct: 152 VGKQIDIPVYSEGDQVSPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNELQEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVSGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP+ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPKERSNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 ETLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|420185458|ref|ZP_14691550.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM040]
gi|394254444|gb|EJD99413.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM040]
Length = 455
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 294/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+A+G +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFVKTVSERALGSDVMQSLTPGQQVIKIVQEELTSLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + A PTV+++ GLQG GKTT + KLA + KK K +LVAGD+YRPAAIDQL
Sbjct: 92 TSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +V P QI + L+ AK++++D VI+DTAGRL ID+A+M+EL++VK
Sbjct: 152 VGKQIDIPVYSEGDQVSPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNELQEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVSGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP+ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPKERSNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 ETLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|293365278|ref|ZP_06611995.1| signal recognition particle protein [Streptococcus oralis ATCC
35037]
gi|307703819|ref|ZP_07640760.1| signal recognition particle protein [Streptococcus oralis ATCC
35037]
gi|291316728|gb|EFE57164.1| signal recognition particle protein [Streptococcus oralis ATCC
35037]
gi|307622654|gb|EFO01650.1| signal recognition particle protein [Streptococcus oralis ATCC
35037]
Length = 523
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAIGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|410667373|ref|YP_006919744.1| signal recognition particle GTPase Ffh [Thermacetogenium phaeum DSM
12270]
gi|409105120|gb|AFV11245.1| signal recognition particle GTPase Ffh [Thermacetogenium phaeum DSM
12270]
Length = 451
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/408 (49%), Positives = 281/408 (68%), Gaps = 5/408 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+L VV+ F+ V E+++G ++ + P QQ++KIV++EL LMG
Sbjct: 32 LREVRLALLEADVNLAVVKNFIGRVWERSLGAEVLESLTPAQQIIKIVKEELTALMGDTR 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S + F+ + PT ILL GLQG GKTT + KLA Y KKQGK +LV DVYRPAAI QL +L
Sbjct: 92 SGINFSATGPTTILLVGLQGGGKTTTAGKLALYYKKQGKRPLLVGADVYRPAAIKQLEVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
Q+ VP ++ G + P +IA++ +E A++++ D+++VDTAGRL ID+ +M EL+ +K
Sbjct: 152 AGQIDVPFFSLGADASPVEIARRAVEHAQRQSQDLILVDTAGRLHIDEELMAELRSMKEA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EV+LVVDAMTGQ+A + F E+G+TG ILTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 VEPQEVILVVDAMTGQDAVNVARAFQEELGLTGVILTKLDGDTRGGAALSVKSVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++ L+PFYPDRMA RILGMGDVLS +E+AQ QE A E++KK+ F
Sbjct: 272 FVGTGEKLDTLQPFYPDRMAARILGMGDVLSLIERAQSTFDQEKAREIEKKLRRQEFTLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG---KITPAQVREAEKSLKIMEAMIEAMTPEEREK 357
DFL+Q V MGS+ +++GM+PG+G ++ Q + K +EAMI +MTPEER
Sbjct: 332 DFLEQIERVRSMGSLEQLLGMLPGVGGAKELRKLQAQFDGKEFVRLEAMINSMTPEERRN 391
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P ++ S RRKR+A+ SG + Q V++L+ Q R K L V G
Sbjct: 392 PAIINGS--RRKRIARGSGTSVQDVNRLLKHFEQTRKLFKQLSEVGSG 437
>gi|383939522|ref|ZP_09992681.1| signal recognition particle protein [Streptococcus pseudopneumoniae
SK674]
gi|383712576|gb|EID69623.1| signal recognition particle protein [Streptococcus pseudopneumoniae
SK674]
Length = 523
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFACKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVDIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNDQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|307709396|ref|ZP_07645854.1| signal recognition particle protein [Streptococcus mitis SK564]
gi|307619979|gb|EFN99097.1| signal recognition particle protein [Streptococcus mitis SK564]
Length = 523
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVDIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|227553504|ref|ZP_03983553.1| signal recognition particle protein [Enterococcus faecalis HH22]
gi|227177374|gb|EEI58346.1| signal recognition particle protein [Enterococcus faecalis HH22]
Length = 442
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/401 (50%), Positives = 287/401 (71%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+AVGV ++ + P QQ+VKIV +EL K +G E
Sbjct: 2 MREIRLALLEADVNLQVVKDFTKRVRERAVGVEVLESLSPAQQIVKIVDEELTKTLGSET 61
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
EL + PTVI++ GLQG GKTT + KLA +L K + +L+AGDVYRPAAIDQL +
Sbjct: 62 VELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAIDQLKV 121
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GT+ P +I +QGL AK+K D V++DTAGRL ID+A+MDELK +K
Sbjct: 122 LGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDELKQIKE 181
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LLVVDAMTGQ+A + +FN ++GITG ++TK+DGD+RGGAALS++ V+G PI
Sbjct: 182 LADPNEILLVVDAMTGQDAVNVADSFNEQLGITGVVITKMDGDTRGGAALSIRAVTGAPI 241
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+ +FDF
Sbjct: 242 KFVGSGEKLTDLEIFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKENSFDF 301
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF++Q V MG + ++ MIPGM + + V+ K + AM+ +MTP ERE P
Sbjct: 302 NDFIEQLDQVMGMGPIEDLLKMIPGMSNMPGIENVKVDPKDVARKRAMVLSMTPAERENP 361
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL +P RR+R+A SG + +V++++ Q + + M+ +
Sbjct: 362 DLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESKKMMQQM 400
>gi|422410043|ref|ZP_16487004.1| signal recognition particle protein [Listeria monocytogenes FSL
F2-208]
gi|313608187|gb|EFR84220.1| signal recognition particle protein [Listeria monocytogenes FSL
F2-208]
Length = 450
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 291/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIKTVSERAVGADVMKSLTPGQQVIKIVQEELTSLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDELK VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IAAPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ +
Sbjct: 272 KFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDAEKMKAMEQKMKDNSMTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT E++ P
Sbjct: 332 DDFLDQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKNEKDNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 392 DIINAS--RRKRIARGSGRPVQEINRLLKQFAEMKKMMKQM 430
>gi|408789950|ref|ZP_11201587.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
florum 2F]
gi|408520791|gb|EKK20821.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
florum 2F]
Length = 479
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/411 (50%), Positives = 287/411 (69%), Gaps = 10/411 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALL+ADV+ VVR+FV+ V EQA G ++ G+ P QQ++KIV ++L ++MGG
Sbjct: 32 MREVRLALLDADVNFAVVRKFVKQVEEQANGENVLEGLNPGQQIIKIVDEQLTEMMGGAT 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
+EL A PT++++AGLQG GKTT KLA LK++ ++ +L+A DVYRPAAI+QL
Sbjct: 92 TELTTAPKIPTIVMMAGLQGAGKTTTVGKLARKLKQEKQARPLLIAADVYRPAAIEQLQQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G Q+ VPV+ GT+V P QIA G++ A+ + D V +DTAGRLQID ++MDELK +K
Sbjct: 152 VGAQIDVPVFAEGTDVDPVQIAIDGVKAAQANHNDYVFIDTAGRLQIDDSLMDELKKIKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++PT+ LLVVDAMTGQ A FN + ITG ILTKLDGD+RGGAALS+K V+GKPI
Sbjct: 212 AVHPTDTLLVVDAMTGQNAVQTAEGFNDALDITGVILTKLDGDTRGGAALSIKAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
G+GE++ DL+ F+PDRMA RILGMGDVLS VEK Q+ + ++ A ++ +KI +FDF
Sbjct: 272 LYTGQGEKLADLDVFHPDRMASRILGMGDVLSLVEKTQQTIDEKKARQLNEKIKENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
+DF+ Q + RMGS+ +IGMIPGM PA V L ++A+I +MT +ERE
Sbjct: 332 DDFVDQLEQLQRMGSIKDLIGMIPGMAN-NPALKNVDMDPHELDKIKAIIYSMTNQEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL----MGVME 404
P+LL +P RR+R+A+ S + Q V++L+ Q +M+ M + MG ME
Sbjct: 391 PDLL--NPSRRRRIARGSAQPIQTVNRLIKQFNEMKKMMNQVSNGNMGGME 439
>gi|365902815|ref|ZP_09440638.1| signal recognition particle protein [Lactobacillus malefermentans
KCTC 3548]
Length = 478
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/419 (48%), Positives = 291/419 (69%), Gaps = 13/419 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V ++A G ++ G+ P QQ+VKIV +EL K MG E
Sbjct: 32 MREIRLALLEADVNFDVVKNFVKTVRDRASGTKVLEGLNPAQQIVKIVDEELTKTMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PT+I+++GLQG GKTT KLAN LK K+ +++A D+YRPAAIDQLV
Sbjct: 92 VPLNKSDKIPTIIMMSGLQGAGKTTTVGKLANKLKTDEKARPLMIAADIYRPAAIDQLVQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+ VPV+ GT+V P +I ++GLE+A + + D V +DTAGRLQID+ +M EL D+K
Sbjct: 152 VGEQIDVPVFEMGTDVNPVEIVRKGLEKAAEDHNDYVFIDTAGRLQIDEQLMQELSDIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LLV+DAMTGQ A A F+ ++ ITG +LTKLDGD+RGGAALS++ +GKPI
Sbjct: 212 LAHPDEILLVIDAMTGQNAVATAEGFDKKLDITGVVLTKLDGDTRGGAALSIRAATGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+M DL+ F+PDRMA RILGMGD+LS +EK Q+ + A+E+ +K+ FDF
Sbjct: 272 KFVGQGEKMADLDVFHPDRMASRILGMGDMLSLIEKTQKKFDDKQAQELTEKMRENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q + MG M +I MIPGM PA V+ K ++ +A++ +MT ERE+
Sbjct: 332 NDFLDQMTQIQSMGPMEDLIKMIPGMAN-NPALKNVQMDPKDIEHTKAVVYSMTTAERER 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGV--MEGGSLP 409
PE+L +P RR+R+A SG+ +V++++ Q +M+ M+ N+ G+ + GGS+P
Sbjct: 391 PEIL--NPSRRRRIAAGSGRPIHEVNRMIKQFGEMKKMMQQASNGNMSGMEGLMGGSMP 447
>gi|242373529|ref|ZP_04819103.1| signal recognition particle protein Ffh [Staphylococcus epidermidis
M23864:W1]
gi|242348892|gb|EES40494.1| signal recognition particle protein Ffh [Staphylococcus epidermidis
M23864:W1]
Length = 455
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 294/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VS++A+G +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFVKTVSDRALGSDVMQSLTPGQQVIKIVQEELTSLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + A PTV+++ GLQG GKTT + KLA + KK K MLVAGD+YRPAAIDQL
Sbjct: 92 TSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAGDIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +V P QI + L+ AK++++D VI+DTAGRL ID+A+M+EL++VK
Sbjct: 152 VGKQIDIPVYSEGDQVPPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNELQEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ISKPDEIMLVVDAMTGQDAVNVAQSFDDQLDVSGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRDSSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP+ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPKERSNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 ETLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|217964047|ref|YP_002349725.1| signal recognition particle protein [Listeria monocytogenes HCC23]
gi|386008573|ref|YP_005926851.1| signal recognition particle protein [Listeria monocytogenes L99]
gi|386027180|ref|YP_005947956.1| signal recognition particle subunit SRP54 [Listeria monocytogenes
M7]
gi|217333317|gb|ACK39111.1| signal recognition particle protein [Listeria monocytogenes HCC23]
gi|307571383|emb|CAR84562.1| signal recognition particle protein [Listeria monocytogenes L99]
gi|336023761|gb|AEH92898.1| signal recognition particle, subunit SRP54 [Listeria monocytogenes
M7]
Length = 450
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 290/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIKTVSERAVGADVLKSLTPGQQVIKIVQEELTSLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV+ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDELK VK
Sbjct: 152 LGKQLDMPVFFLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ +
Sbjct: 272 KFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDAEKMKAMEQKMKDNSMTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT E++ P
Sbjct: 332 DDFLDQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKNEKDNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+++ S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 392 DIINAS--RRKRIARGSGRPVQEINRLLKQFAEMKKMMKQM 430
>gi|365925209|ref|ZP_09447972.1| signal recognition particle protein [Lactobacillus mali KCTC 3596 =
DSM 20444]
gi|420266516|ref|ZP_14768978.1| signal recognition particle protein [Lactobacillus mali KCTC 3596 =
DSM 20444]
gi|394425212|gb|EJE98212.1| signal recognition particle protein [Lactobacillus mali KCTC 3596 =
DSM 20444]
Length = 477
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/417 (47%), Positives = 289/417 (69%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V +A+G ++ + P QQ+VKIV DEL K+MG E
Sbjct: 32 MREIRLALLEADVNFQVVKDFVKTVRTRAIGAEVLESLTPAQQIVKIVNDELTKVMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
EL + PT+I++ GLQG GKTT KLA LK + + +++A D+YRPAAIDQL I
Sbjct: 92 VELNKSDKIPTIIMMVGLQGAGKTTTLGKLALKLKNEKNARPLMIAADIYRPAAIDQLEI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+ + VPV++ GT+V P +I ++GLE A +K D V++DTAGRLQID+ +MDEL +K
Sbjct: 152 LGKSIDVPVFSMGTDVSPVEIVRKGLELAAEKKNDYVLIDTAGRLQIDELLMDELAQIKT 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAQPDEILLTVDAMTGQNAVEVAKGFNEQLDVTGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M DL+ FYPDRM+ RILGMGD+L+ +EKAQ+ ++ A++MQ+K+ +FDF
Sbjct: 272 KFIGQGEKMTDLDVFYPDRMSSRILGMGDMLTLIEKAQQDFDEKKAQQMQEKMRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q V +MG M +I MIPGM PA ++ K + ++A++ +MT EERE
Sbjct: 332 NDFIDQMEQVQKMGPMEDIIKMIPGMAN-NPAIKNLKVNPKDIDHLKAVVYSMTNEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+L +P RR+R+A SG+ +V++++ Q + MK +MG + G+ + +
Sbjct: 391 PDLF--NPSRRRRIAAGSGRPIHEVNRMIKQFNE----MKKMMGKVSKGNFEGMEGM 441
>gi|418414279|ref|ZP_12987494.1| signal recognition particle protein [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|410876886|gb|EKS24783.1| signal recognition particle protein [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 455
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 290/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F+ VSE+A+G +++ + P QQ++KIV+DEL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFINTVSERALGSDVMQSLTPGQQVIKIVQDELTQLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + A PTV+++ GLQG GKTT + KLA + KK K MLVAGD+YRPAAIDQL
Sbjct: 92 TTIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAGDIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPVY+ G +VKP QI + L+ AK++++D VI+DTAGRL ID+A+M+EL++VK
Sbjct: 152 VGKQLDVPVYSEGDQVKPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNELQEVKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P EV+LVVDAMTGQ+ + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ISKPDEVMLVVDAMTGQDTVNVAQSFDEQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+M+ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKMDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRDSSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL Q V +G + ++ MIPGM K+ ++ +K + ++A+I++MTP ER P
Sbjct: 332 EDFLDQLDQVKNLGPLDDIMKMIPGMNKMKGMNKLNMDDKQIDHIKAIIQSMTPMERANP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 ATLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|336113783|ref|YP_004568550.1| signal recognition particle protein [Bacillus coagulans 2-6]
gi|335367213|gb|AEH53164.1| signal recognition particle protein [Bacillus coagulans 2-6]
Length = 447
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/408 (50%), Positives = 301/408 (73%), Gaps = 4/408 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++KIV++EL LMGG
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQEVLKSLTPGQQVIKIVQEELTNLMGGSQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT S KLAN L KK ++ +LVA D+YRPAAI QL
Sbjct: 92 SKIAVAKRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRTPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+G+PV++ G ++ P +IA+Q +E+AK+++ D VI+DTAGRL ID +M+ELK++K
Sbjct: 152 LGKQLGMPVFSLGDKISPVEIARQAIEKAKEEHHDTVIIDTAGRLHIDSELMNELKEIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+ LVVDAMTGQ+A + +FN ++GITG ILTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 LAHPDEIFLVVDAMTGQDAVNVAQSFNDQLGITGVILTKLDGDTRGGAALSIRAVTEKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+M+ LEPF+P+RMA RILGMGD+LS +EKAQE + +E A ++KK+ +F F
Sbjct: 272 KFAGMGEKMDALEPFHPERMASRILGMGDILSLIEKAQETVDEEKARALEKKMRDQSFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+Q V +MG + ++ MIPG ++ ++ EK + +EA+I++MT +E+ +P
Sbjct: 332 EDFLEQLGQVRKMGPLGDILKMIPGANRMKGMDNLQIDEKQIAHVEAIIQSMTKQEKIRP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
+++ S R+KR+A+ SG+ Q+V++L+ Q +M+ MK L G+ + G
Sbjct: 392 DIINAS--RKKRIAKGSGRPVQEVNRLLKQFEEMKKMMKQLQGMNQKG 437
>gi|322376834|ref|ZP_08051327.1| signal recognition particle protein [Streptococcus sp. M334]
gi|321282641|gb|EFX59648.1| signal recognition particle protein [Streptococcus sp. M334]
Length = 523
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+L VV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALSVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNTQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|315222974|ref|ZP_07864853.1| signal recognition particle protein [Streptococcus anginosus F0211]
gi|315187924|gb|EFU21660.1| signal recognition particle protein [Streptococcus anginosus F0211]
Length = 516
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/409 (49%), Positives = 288/409 (70%), Gaps = 13/409 (3%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++ R ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KETRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ G +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEGARPLMIAADIYRPAAIDQLTTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFSLGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEERE 356
DF+ Q V MG M ++ MIPGM PA +V E E + K A++ +MTP ERE
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSMTPTERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 390 NPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQVMQ---GVMSG 433
>gi|373106124|ref|ZP_09520428.1| signal recognition particle protein [Stomatobaculum longum]
gi|371653220|gb|EHO18624.1| signal recognition particle protein [Stomatobaculum longum]
Length = 450
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/405 (50%), Positives = 288/405 (71%), Gaps = 6/405 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++R ALLEADV+ VV++FV+++ E+AVG ++ + P QQ+VKIV +EL+KLMG E
Sbjct: 32 LKEVRMALLEADVNFKVVKQFVKSIEERAVGAEVLESLTPGQQVVKIVNEELIKLMGSET 91
Query: 61 SELVFAKSRP-TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ A+ R TVIL+AGLQG GKTT +AKLA LK +G +L A DVYRPAAI+QL +
Sbjct: 92 TEIKMAQDRDITVILMAGLQGAGKTTTAAKLAGKLKAKGHRPLLAACDVYRPAAIEQLRV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
GE+VGVPV++ G+ V P IA+ E+A++ + D++IVDTAGRLQID+ MM+EL +K
Sbjct: 152 NGEKVGVPVFSMGSGVDPVNIARAAFEKARQDHNDILIVDTAGRLQIDEQMMEELGRIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
L LL VDAMTGQEA + TF ++G+ G I+TKLDGD+RGGAALS+K V+GKPI
Sbjct: 212 ALRADWTLLTVDAMTGQEAVNVAKTFEDKVGVDGVIVTKLDGDTRGGAALSIKAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
VG GE++ DLE FYPDRMA RILGMGD+LS +EKAQ + + +A M +K+ A FDF
Sbjct: 272 LFVGMGEKLSDLEQFYPDRMASRILGMGDILSLIEKAQAEVDEAEARRMSEKLKKAEFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + V ++G ++ ++ M+P G P ++ E+ + +EAMI +M+ EER P
Sbjct: 332 NDFLDQMKQVKKLGGIAGIMAMMPTAGASMP-EIDESH--MGRVEAMILSMSKEERANPS 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 404
+L +P R+ R+A+ +G +V+++V Q QMR MK L G+M+
Sbjct: 389 IL--NPSRKNRIARGAGVDINEVNRMVKQFEQMRKMMKQLPGMMK 431
>gi|419431672|ref|ZP_13971812.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP05]
gi|419497447|ref|ZP_14037156.1| signal recognition particle protein [Streptococcus pneumoniae
GA47522]
gi|421309699|ref|ZP_15760326.1| signal recognition particle protein [Streptococcus pneumoniae
GA62681]
gi|379600916|gb|EHZ65695.1| signal recognition particle protein [Streptococcus pneumoniae
GA47522]
gi|379630239|gb|EHZ94829.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP05]
gi|395911120|gb|EJH21989.1| signal recognition particle protein [Streptococcus pneumoniae
GA62681]
Length = 523
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQTDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAVGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|209360587|gb|ACI42964.1| signal recognition particle protein [Lactobacillus casei]
Length = 478
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/416 (48%), Positives = 288/416 (69%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ F++ V +A+G ++ + P QQ++KIV DELVK MG
Sbjct: 32 MREIRLALLEADVNFDVVKTFIKNVRTKALGAEVLESLTPSQQIIKIVNDELVKTMGEAA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++AGLQGVGKTT KL+ YL + +L+A DVYRPAAIDQL
Sbjct: 92 VPLNKAPHIPTVIMMAGLQGVGKTTTVGKLSKYLMDNDSARPLLIAADVYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+ELK++K
Sbjct: 152 IGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNELKNIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM +KI +FDF
Sbjct: 272 KFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMAEKIRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
NDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+ER P
Sbjct: 332 NDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQERGDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L L
Sbjct: 392 DLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDGL 441
>gi|319892235|ref|YP_004149110.1| signal recognition particle subunit Ffh SRP54 [Staphylococcus
pseudintermedius HKU10-03]
gi|317161931|gb|ADV05474.1| Signal recognition particle, subunit Ffh SRP54 [Staphylococcus
pseudintermedius HKU10-03]
Length = 455
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV VSE+A+G +++ + P QQ++KIV++EL LMGG+
Sbjct: 32 MREVRLALLEADVNFKVVKNFVNTVSERALGSDVMKSLTPGQQVIKIVQEELTTLMGGDN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + AK PTV+++ GLQG GKTT + KLA + KK K +LVAGD+YRPAAI+QL
Sbjct: 92 TSITMAKKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +V P QI + L+ AK +++D VI+DTAGRL ID+A+M+EL++VK
Sbjct: 152 VGKQIDIPVYSEGDQVPPQQIVQNALQHAKAEHLDFVIIDTAGRLHIDEALMNELQEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ISKPDEIMLVVDAMTGQDAVNVAESFDQQLDVTGVTLTKLDGDTRGGAALSIRAVTEKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + +E A +++KK+ +++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDEEKARDLEKKMRTSSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTPEERE P
Sbjct: 332 EDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R++R+A SG+T Q+V++L+ Q M+ MK
Sbjct: 392 DKLNVS--RKRRIAAGSGRTLQEVNRLLKQFNDMKKMMKQF 430
>gi|148994098|ref|ZP_01823438.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|168489114|ref|ZP_02713313.1| signal recognition particle protein [Streptococcus pneumoniae
SP195]
gi|418125923|ref|ZP_12762831.1| signal recognition particle protein [Streptococcus pneumoniae
GA44511]
gi|418191839|ref|ZP_12828342.1| signal recognition particle protein [Streptococcus pneumoniae
GA47388]
gi|418214472|ref|ZP_12841207.1| signal recognition particle protein [Streptococcus pneumoniae
GA54644]
gi|418234483|ref|ZP_12861061.1| signal recognition particle protein [Streptococcus pneumoniae
GA08780]
gi|419484511|ref|ZP_14024287.1| signal recognition particle protein [Streptococcus pneumoniae
GA43257]
gi|419508354|ref|ZP_14048007.1| signal recognition particle protein [Streptococcus pneumoniae
GA49542]
gi|421294078|ref|ZP_15744801.1| signal recognition particle protein [Streptococcus pneumoniae
GA56113]
gi|421301149|ref|ZP_15751819.1| signal recognition particle protein [Streptococcus pneumoniae
GA19998]
gi|147927451|gb|EDK78480.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|183572579|gb|EDT93107.1| signal recognition particle protein [Streptococcus pneumoniae
SP195]
gi|353796704|gb|EHD77043.1| signal recognition particle protein [Streptococcus pneumoniae
GA44511]
gi|353856912|gb|EHE36879.1| signal recognition particle protein [Streptococcus pneumoniae
GA47388]
gi|353871755|gb|EHE51626.1| signal recognition particle protein [Streptococcus pneumoniae
GA54644]
gi|353887774|gb|EHE67551.1| signal recognition particle protein [Streptococcus pneumoniae
GA08780]
gi|379584022|gb|EHZ48899.1| signal recognition particle protein [Streptococcus pneumoniae
GA43257]
gi|379612072|gb|EHZ76794.1| signal recognition particle protein [Streptococcus pneumoniae
GA49542]
gi|395894368|gb|EJH05348.1| signal recognition particle protein [Streptococcus pneumoniae
GA56113]
gi|395898709|gb|EJH09653.1| signal recognition particle protein [Streptococcus pneumoniae
GA19998]
Length = 523
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVCHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|182684220|ref|YP_001835967.1| signal recognition particle protein [Streptococcus pneumoniae
CGSP14]
gi|182629554|gb|ACB90502.1| signal recognition particle protein [Streptococcus pneumoniae
CGSP14]
Length = 523
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN L+K+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLQKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|293374741|ref|ZP_06621049.1| signal recognition particle protein [Turicibacter sanguinis PC909]
gi|325837601|ref|ZP_08166448.1| signal recognition particle protein [Turicibacter sp. HGF1]
gi|292646655|gb|EFF64657.1| signal recognition particle protein [Turicibacter sanguinis PC909]
gi|325490903|gb|EGC93202.1| signal recognition particle protein [Turicibacter sp. HGF1]
Length = 475
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/403 (46%), Positives = 292/403 (72%), Gaps = 10/403 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV++ VVR F+ V E+AVG +++ + P QQ++KIV +EL KLMG
Sbjct: 32 MREVRLALLEADVNIKVVREFINEVKEKAVGEAVLKSLTPGQQVIKIVNEELTKLMGDSA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+EL F ++P V ++ GLQG GKTT + K+++YL KK+ K+ +LVA DVYRPAA+DQL
Sbjct: 92 AELNFGHAKPAVFMMVGLQGAGKTTHTGKISSYLRKKEKKNPLLVACDVYRPAAVDQLKT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY GT + P IAK+ + A++ D+VI+DTAGRL ID+ +MDELK++K
Sbjct: 152 IGKQLNIPVYEKGTSMNPVDIAKEAMTYARENGHDLVIIDTAGRLHIDEQLMDELKNIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++NP E+LLVVDAMTGQ+A + +F+ ++ +TG +LTKLDGD+RGGAALS+++++ PI
Sbjct: 212 LVNPQEILLVVDAMTGQDAVNVAQSFHDQLDLTGVVLTKLDGDTRGGAALSIRKITNVPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+++ LE F+P+RMA RILGMGDV++ +E+AQE +E++ ++ K+M+A +DF
Sbjct: 272 KFIGLGEKLDTLEVFHPERMASRILGMGDVMTLIERAQENFDEEESMKLADKMMNATYDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMTPEERE 356
NDFLKQ + + ++G+ ++ MIPG+G Q+++ K + +EA+I +MT +ER+
Sbjct: 332 NDFLKQMKQMKKLGAFEDILKMIPGVGN----QLKDINIDPKQMARVEAIIYSMTEQERK 387
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
P+L+ S R++R+A+ G +V++++ Q MR MK
Sbjct: 388 NPDLINAS--RKQRIAKGCGCDIAEVNRMIKQFTDMRKMMKKF 428
>gi|389573280|ref|ZP_10163355.1| signal recognition particle protein Ffh [Bacillus sp. M 2-6]
gi|388426977|gb|EIL84787.1| signal recognition particle protein Ffh [Bacillus sp. M 2-6]
Length = 447
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/401 (50%), Positives = 299/401 (74%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQEVMQSLTPGQQVIKVVKEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT + KLAN L KK + M+VA D+YRPAAI QL
Sbjct: 92 SKIAVAKKSPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMMVAADIYRPAAIQQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID+ +MDEL+ VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHHDYVILDTAGRLHIDEDLMDELQKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 VANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K GE+++ +EPF+P+RMA RILGMGDVL+ +EKAQ + Q+ A+E+++K+ + +F
Sbjct: 272 KFAALGEKLDAIEPFHPERMASRILGMGDVLTLIEKAQANVDQDKAKELEQKMRTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I++MT EE+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLDELIQMMPGAGKMKGLKNVQVDEKQLNHIEAIIKSMTTEEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK +
Sbjct: 392 EVINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQM 430
>gi|419766060|ref|ZP_14292277.1| signal recognition particle protein [Streptococcus mitis SK579]
gi|383354438|gb|EID32001.1| signal recognition particle protein [Streptococcus mitis SK579]
Length = 523
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|257870294|ref|ZP_05649947.1| signal recognition particle protein [Enterococcus gallinarum EG2]
gi|357050559|ref|ZP_09111757.1| signal recognition particle protein [Enterococcus saccharolyticus
30_1]
gi|257804458|gb|EEV33280.1| signal recognition particle protein [Enterococcus gallinarum EG2]
gi|355381212|gb|EHG28339.1| signal recognition particle protein [Enterococcus saccharolyticus
30_1]
Length = 472
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 288/401 (71%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+AVG ++ + P QQ+VKIV +EL K +G E
Sbjct: 32 MREIRLALLEADVNLQVVKEFTKNVRERAVGAEVLDSLSPAQQIVKIVDEELTKTLGSET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + PTVI++AGLQG GKTT + KLAN+L K + +++AGDVYRPAAIDQL +
Sbjct: 92 VGIEKSPKIPTVIMMAGLQGAGKTTFAGKLANHLIKTENARPLMIAGDVYRPAAIDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GT+V P +I +QG+ A++K D V++DTAGRL ID+ +MDELK +K
Sbjct: 152 LGQQLDVPVFDMGTDVSPVEIVRQGMALAREKKNDYVLIDTAGRLHIDETLMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAALS+++V+G PI
Sbjct: 212 LAQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAALSIRQVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+ +FDF
Sbjct: 272 KFTGTGEKLTDLEVFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF++Q V MG + ++ MIPGM ++ + V+ K + +AM+ +MTP ERE P
Sbjct: 332 NDFVEQIDQVMGMGPIEDLLKMIPGMSQMPGIENVKVDPKQIARQKAMVYSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 392 DLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|157150208|ref|YP_001450412.1| signal recognition particle protein [Streptococcus gordonii str.
Challis substr. CH1]
gi|157075002|gb|ABV09685.1| signal recognition particle protein [Streptococcus gordonii str.
Challis substr. CH1]
Length = 524
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/440 (46%), Positives = 296/440 (67%), Gaps = 26/440 (5%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKTNHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M +I M+PGM PA + EK + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLIKMLPGMAS-NPALKNFKVDEKEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVME------------- 404
+LL +P RR+R+A SG + V++ + Q + M+ ++ G M
Sbjct: 392 DLL--TPSRRRRIANGSGNSFVDVNKFIKDFNQSKQLMQGVLSGDMSKMMKQMGLNPNNM 449
Query: 405 ------GGSLPALSNLEDAL 418
GG++P +S L+D +
Sbjct: 450 PKNMPGGGAMPDMSALQDMM 469
>gi|417915214|ref|ZP_12558835.1| signal recognition particle protein [Streptococcus mitis bv. 2 str.
SK95]
gi|342835328|gb|EGU69579.1| signal recognition particle protein [Streptococcus mitis bv. 2 str.
SK95]
Length = 523
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGL++A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLDQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|418962676|ref|ZP_13514530.1| signal recognition particle protein [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383345211|gb|EID23344.1| signal recognition particle protein [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 516
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/409 (49%), Positives = 287/409 (70%), Gaps = 13/409 (3%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ G +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEGARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I QGLE+AK + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFSLGTEVPAVEIVHQGLEQAKANHNDYVLIDTAGRLQIDERLMNELRDVKTL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKTLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEERE 356
DF+ Q V MG M ++ MIPGM PA +V E E + K A++ +MTP ERE
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSMTPVERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 390 NPDLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSVMQ---GVMSG 433
>gi|282859593|ref|ZP_06268697.1| signal recognition particle protein [Prevotella bivia JCVIHMP010]
gi|424899550|ref|ZP_18323092.1| signal recognition particle protein [Prevotella bivia DSM 20514]
gi|282587644|gb|EFB92845.1| signal recognition particle protein [Prevotella bivia JCVIHMP010]
gi|388591750|gb|EIM31989.1| signal recognition particle protein [Prevotella bivia DSM 20514]
Length = 453
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/417 (48%), Positives = 286/417 (68%), Gaps = 5/417 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V +A+G+ ++ V+P Q +VK+V DEL LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKSFTDTVKTKALGMNVLTAVKPGQLMVKLVHDELADLMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L SRP +IL++GLQG GKTT + KLAN LK K+ K+ +LVA DVYRPAAI+QL +
Sbjct: 91 VGLKLT-SRPAIILMSGLQGSGKTTFTGKLANMLKAKEHKTPLLVACDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQV VPVY+ ++IA + EAK K DVVI+DTAGRL ID+ MM+E++ +K
Sbjct: 150 VGEQVNVPVYSEPENKNVNEIATHAIAEAKAKGNDVVIIDTAGRLAIDEDMMNEIESLKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 HVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ F+P+RMA RILGMGDV+S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFIGTGEKMEAIDVFHPERMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFYNQIQQIKKMGNLKDLAAMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLED 416
+L + VR++R+A+ SG Q+V++LV Q Q R MK + G G + + +L++
Sbjct: 389 IL--NNVRKQRIAKGSGTNLQEVNRLVKQFDQTRKMMKMVTGSKMAGMMSKMKDLKN 443
>gi|189459673|ref|ZP_03008458.1| hypothetical protein BACCOP_00301 [Bacteroides coprocola DSM 17136]
gi|189433632|gb|EDV02617.1| signal recognition particle protein [Bacteroides coprocola DSM
17136]
Length = 441
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 277/402 (68%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL KLMGG+
Sbjct: 31 LKDVRRALLDADVNYKVAKSFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTKLMGGDT 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ K RP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 AEIEL-KGRPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPVY P QIA ++EAK K D+VIVDTAGRL +D+ MM+E++ +K
Sbjct: 150 LGQQIEVPVYCELDSKDPVQIALNAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEIEAIKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPDETLFVVDSMTGQDAVNTAREFNERLDFNGVVLTKLDGDTRGGAALSIRTVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEER PE
Sbjct: 330 NDFLTQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEERTHPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L + RR R+A+ SG + Q+V++L+ Q Q R MK + G
Sbjct: 389 IL--NGTRRTRIAKGSGTSIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|386319497|ref|YP_006015660.1| signal recognition particle protein [Staphylococcus
pseudintermedius ED99]
gi|323464668|gb|ADX76821.1| signal recognition particle protein [Staphylococcus
pseudintermedius ED99]
Length = 455
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV VSE+A+G +++ + P QQ++KIV++EL LMGG+
Sbjct: 32 MREVRLALLEADVNFKVVKNFVNTVSERALGSDVMKSLTPGQQVIKIVQEELTTLMGGDN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + AK PTV+++ GLQG GKTT + KLA + KK K +LVAGD+YRPAAI+QL
Sbjct: 92 TSITMAKKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +V P QI + L+ AK +++D VI+DTAGRL ID+A+M+EL++VK
Sbjct: 152 VGKQIDIPVYSEGDQVPPQQIVQNALQHAKAEHLDFVIIDTAGRLHIDEALMNELQEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ISKPDEIMLVVDAMTGQDAVNVAESFDQQLDVTGVTLTKLDGDTRGGAALSIRAVTEKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + +E A +++KK+ +++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDEEKARDLEKKMRTSSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTPEERE P
Sbjct: 332 EDFLEQLDQVKSLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ L S R++R+A SG+T Q+V++L+ Q M+ MK
Sbjct: 392 DKLNVS--RKRRIAAGSGRTLQEVNRLLKQFNDMKKMMKQF 430
>gi|194014310|ref|ZP_03052927.1| signal recognition particle protein [Bacillus pumilus ATCC 7061]
gi|194013336|gb|EDW22901.1| signal recognition particle protein [Bacillus pumilus ATCC 7061]
Length = 446
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/407 (49%), Positives = 302/407 (74%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQEVMKSLTPGQQVIKVVKEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT + KLAN L KK + M+VA D+YRPAAI QL
Sbjct: 92 SKIAVAKKSPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRQPMMVAADIYRPAAIQQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID+ +MDEL+ VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHHDYVILDTAGRLHIDEELMDELQKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V +P E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 VASPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K GE+++ +EPF+P+RMA RILGMGDVL+ +EKAQ + Q+ A+E+++K+ + +F
Sbjct: 272 KFAALGEKLDAIEPFHPERMASRILGMGDVLTLIEKAQANVDQDKAKELEQKMRTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I++MT EE+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLDELIQMMPGAGKMKGLKNVQVDEKQLNHIEAIIKSMTTEEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
E++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 EVINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|423511879|ref|ZP_17488410.1| signal recognition particle protein [Bacillus cereus HuA2-1]
gi|402450140|gb|EJV81974.1| signal recognition particle protein [Bacillus cereus HuA2-1]
Length = 449
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/406 (49%), Positives = 293/406 (72%), Gaps = 8/406 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+AVG +++ + P QQ++KIV++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFIKRVSERAVGQDVMKSLTPGQQVIKIVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +M EL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMGELAKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKIERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 390 QPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|422865505|ref|ZP_16912130.1| signal recognition particle protein [Streptococcus sanguinis
SK1058]
gi|327489572|gb|EGF21364.1| signal recognition particle protein [Streptococcus sanguinis
SK1058]
Length = 524
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ K+ +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEKARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M +I M+PGM PA + E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLIKMLPGMAN-NPALKNFKVDEREIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--TPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|163941583|ref|YP_001646467.1| signal recognition particle protein [Bacillus weihenstephanensis
KBAB4]
gi|229013028|ref|ZP_04170193.1| Signal recognition particle protein [Bacillus mycoides DSM 2048]
gi|229061448|ref|ZP_04198793.1| Signal recognition particle protein [Bacillus cereus AH603]
gi|229134653|ref|ZP_04263462.1| Signal recognition particle protein [Bacillus cereus BDRD-ST196]
gi|229168584|ref|ZP_04296307.1| Signal recognition particle protein [Bacillus cereus AH621]
gi|423489021|ref|ZP_17465703.1| signal recognition particle protein [Bacillus cereus BtB2-4]
gi|423494746|ref|ZP_17471390.1| signal recognition particle protein [Bacillus cereus CER057]
gi|423498462|ref|ZP_17475079.1| signal recognition particle protein [Bacillus cereus CER074]
gi|423518535|ref|ZP_17495016.1| signal recognition particle protein [Bacillus cereus HuA2-4]
gi|423592159|ref|ZP_17568190.1| signal recognition particle protein [Bacillus cereus VD048]
gi|423598844|ref|ZP_17574844.1| signal recognition particle protein [Bacillus cereus VD078]
gi|423661315|ref|ZP_17636484.1| signal recognition particle protein [Bacillus cereus VDM022]
gi|423669419|ref|ZP_17644448.1| signal recognition particle protein [Bacillus cereus VDM034]
gi|423674402|ref|ZP_17649341.1| signal recognition particle protein [Bacillus cereus VDM062]
gi|163863780|gb|ABY44839.1| signal recognition particle protein [Bacillus weihenstephanensis
KBAB4]
gi|228614990|gb|EEK72092.1| Signal recognition particle protein [Bacillus cereus AH621]
gi|228648699|gb|EEL04725.1| Signal recognition particle protein [Bacillus cereus BDRD-ST196]
gi|228717871|gb|EEL69519.1| Signal recognition particle protein [Bacillus cereus AH603]
gi|228748282|gb|EEL98142.1| Signal recognition particle protein [Bacillus mycoides DSM 2048]
gi|401150839|gb|EJQ58291.1| signal recognition particle protein [Bacillus cereus CER057]
gi|401160511|gb|EJQ67889.1| signal recognition particle protein [Bacillus cereus CER074]
gi|401160743|gb|EJQ68118.1| signal recognition particle protein [Bacillus cereus HuA2-4]
gi|401232292|gb|EJR38794.1| signal recognition particle protein [Bacillus cereus VD048]
gi|401237114|gb|EJR43571.1| signal recognition particle protein [Bacillus cereus VD078]
gi|401298546|gb|EJS04146.1| signal recognition particle protein [Bacillus cereus VDM034]
gi|401301356|gb|EJS06945.1| signal recognition particle protein [Bacillus cereus VDM022]
gi|401309953|gb|EJS15286.1| signal recognition particle protein [Bacillus cereus VDM062]
gi|402432269|gb|EJV64328.1| signal recognition particle protein [Bacillus cereus BtB2-4]
Length = 449
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/406 (49%), Positives = 293/406 (72%), Gaps = 8/406 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+AVG +++ + P QQ++KIV++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFIKRVSERAVGQDVMKSLTPGQQVIKIVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +M EL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMGELAKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKVERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 390 QPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|257867539|ref|ZP_05647192.1| signal recognition particle protein [Enterococcus casseliflavus
EC30]
gi|257873868|ref|ZP_05653521.1| signal recognition particle protein [Enterococcus casseliflavus
EC10]
gi|257877619|ref|ZP_05657272.1| signal recognition particle protein [Enterococcus casseliflavus
EC20]
gi|325571330|ref|ZP_08146830.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus casseliflavus
ATCC 12755]
gi|420262069|ref|ZP_14764712.1| signal recognition particle protein [Enterococcus sp. C1]
gi|257801595|gb|EEV30525.1| signal recognition particle protein [Enterococcus casseliflavus
EC30]
gi|257808032|gb|EEV36854.1| signal recognition particle protein [Enterococcus casseliflavus
EC10]
gi|257811785|gb|EEV40605.1| signal recognition particle protein [Enterococcus casseliflavus
EC20]
gi|325155806|gb|EGC68002.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus casseliflavus
ATCC 12755]
gi|394771091|gb|EJF50875.1| signal recognition particle protein [Enterococcus sp. C1]
Length = 472
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/401 (49%), Positives = 289/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+AVGV ++ + P QQ+VKIV +EL K +G E
Sbjct: 32 MREIRLALLEADVNLQVVKEFTKNVRERAVGVEVLESLSPAQQIVKIVDEELTKTLGSET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + PT+I++AGLQG GKTT + KLAN+L K + +++AGDVYRPAAIDQL +
Sbjct: 92 VGIEKSPKIPTIIMMAGLQGAGKTTFAGKLANHLIKTENARPLMIAGDVYRPAAIDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GT+V P +I +QGL A++K D V++DTAGRL ID+ +M+ELK +K
Sbjct: 152 LGQQLDVPVFDMGTDVSPVEIVRQGLALAREKKNDYVLIDTAGRLHIDENLMEELKQIKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAALS+++V+G PI
Sbjct: 212 LAQPNEILLVVDAMTGQDAVNVAESFNQQLGITGVVITKLDGDTRGGAALSIRQVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ +K+ +FDF
Sbjct: 272 KFTGTGEKLTDLEVFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAQKMKENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
NDF++Q V MG + ++ MIPGM ++ + V+ K + +AM+ +MTP ERE P
Sbjct: 332 NDFVEQIDQVMGMGPIEDLLKMIPGMSQMPGIENVKVDPKQIARQKAMVYSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL +P RR+R+A SG + +V++++ Q + R M+ +
Sbjct: 392 DLL--NPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQM 430
>gi|302345690|ref|YP_003814043.1| signal recognition particle protein [Prevotella melaninogenica ATCC
25845]
gi|302150218|gb|ADK96480.1| signal recognition particle protein [Prevotella melaninogenica ATCC
25845]
Length = 450
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/421 (48%), Positives = 286/421 (67%), Gaps = 11/421 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKTFTDTVKQKALGMNVLTAVKPGQLMVKIVHDELAELMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L + RP++IL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAIDQL +
Sbjct: 91 VGLNLS-GRPSIILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAIDQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGV VY+ ++IA L EAK K DVVI+DTAGRL +D+ MM+E++ +K
Sbjct: 150 VGEQVGVAVYSEPENKNVNEIADHALAEAKAKGHDVVIIDTAGRLAVDEEMMNEIESLKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 HVHPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG------SLPALSN 413
LL S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P + N
Sbjct: 389 LLNNS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTGSKMAGMMSKMKGMPGMPN 446
Query: 414 L 414
+
Sbjct: 447 M 447
>gi|169342711|ref|ZP_02863752.1| signal recognition particle protein [Clostridium perfringens C str.
JGS1495]
gi|169299217|gb|EDS81287.1| signal recognition particle protein [Clostridium perfringens C str.
JGS1495]
Length = 452
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/388 (48%), Positives = 287/388 (73%), Gaps = 2/388 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV++F+ V ++ VG ++ + P QQ++KIV DEL LMG
Sbjct: 32 MREVKLALLEADVNFKVVKKFISNVKDKCVGEEVLNSLTPGQQVIKIVNDELTTLMGETE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L ++ + PTV +L GLQG GKTT++ KLA +L+K+ K +LVA D+YRPAAI QL ++
Sbjct: 92 SKLKYSDNGPTVFMLVGLQGAGKTTMAGKLALHLRKKNKKPLLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV++ G +VK IAK +E AK +VVI+DTAGRL ID+ +M ELKDVK V
Sbjct: 152 GKQIDIPVFSMGDKVKAVDIAKAAIEHAKDNGNNVVIIDTAGRLHIDEDLMQELKDVKEV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP+E+LLVVDAMTGQ+A + TFN + ++G ILTKLDGD+RGGAALS+++++GKPIK
Sbjct: 212 SNPSEILLVVDAMTGQDAVNVAETFNNSLDLSGIILTKLDGDTRGGAALSIRDITGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M D+E F+PDRMA RILGMGDVLS +EKAQ+ + Q++A ++ +K+++ F+F+
Sbjct: 272 FVGVGEKMSDIEVFHPDRMASRILGMGDVLSLIEKAQQAIDQDEASKLSEKMLNQEFNFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
D+L + ++G ++++I MIPG+ ++ + EK + ++A+I++MT +ER++P
Sbjct: 332 DYLSAMDQMKKLGPINKLIEMIPGVNTKELEGIDFSQGEKQMATVKAIIQSMTAKERKQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLV 386
L+ + R++R+A+ SG T Q+V++++
Sbjct: 392 SLVIGNGSRKRRIAKGSGTTVQEVNKVL 419
>gi|146297160|ref|YP_001180931.1| signal recognition particle protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410736|gb|ABP67740.1| signal recognition particle protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 443
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/399 (49%), Positives = 277/399 (69%), Gaps = 2/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++++ ALLEADV+ VV+ F+ V+++AVG ++ + P QQ++KIV DE+V L+GG
Sbjct: 31 MKEVKLALLEADVNYKVVKDFINTVTQKAVGEEVLESLTPAQQVIKIVYDEMVNLLGGND 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L F+ S ++ ++ GLQG GKTT + KLA LKKQGK +L+A D+YRPAAI QL ++
Sbjct: 91 TKLTFSPSGFSIYMMVGLQGSGKTTTAGKLAALLKKQGKKPLLIACDIYRPAAIKQLEVV 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
E+VGV Y + +IA +G+ AK D+ IVDTAGRL I++ +M+EL +K
Sbjct: 151 AEKVGVSCYADYDKKDAVKIAVEGVNFAKSNRFDIAIVDTAGRLHINEELMNELVAIKSA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ PTE+LLV+DAMTGQ+A + FN ++GI G I+TKLDGD+RGGAALSVK ++GKPIK
Sbjct: 211 IKPTEILLVLDAMTGQDAVNVAEAFNNQLGIDGIIMTKLDGDTRGGAALSVKAITGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+MEDLE FYPDRMA RILGMGD+L+ +EKAQE + Q+ AEE++KK+ S F
Sbjct: 271 FAGMGEKMEDLEVFYPDRMASRILGMGDILTLIEKAQEAIDQKKAEELEKKLRSMQFTLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG +S++I MIPG+ EK LK +EA+I +MT EER+ P +
Sbjct: 331 DFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKELKKIEAIINSMTKEERQDPSI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S R++R+A SG T Q V++L+ Q M+ MK
Sbjct: 391 INSS--RKRRIAMGSGTTVQDVNRLLKQFEDMKRMMKQF 427
>gi|160892788|ref|ZP_02073578.1| hypothetical protein CLOL250_00319 [Clostridium sp. L2-50]
gi|156865829|gb|EDO59260.1| signal recognition particle protein [Clostridium sp. L2-50]
Length = 448
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/406 (50%), Positives = 286/406 (70%), Gaps = 4/406 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++++RALLEADV+ VV+ F++AVS++AVG +++G+ P ++KIV++E+ KLMG +V
Sbjct: 32 MKEVKRALLEADVNFKVVKSFIKAVSDRAVGEEVLKGLNPGHMVIKIVKEEMDKLMGSDV 91
Query: 61 SEL-VFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
+EL + + TVI++ GLQG GKTT +AKLA K +GK +LVA DVYRPAAI QL I
Sbjct: 92 TELKLLPSNEITVIMMCGLQGAGKTTTAAKLAYQFKNKGKKPLLVACDVYRPAAIKQLQI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
GE+VGVPV+T G KP IAK + A+K ++++V +DTAGRL +D+ MMDEL ++K
Sbjct: 152 NGEKVGVPVFTMGDNHKPLDIAKAAILHAEKNHMNLVFIDTAGRLHVDEDMMDELAEIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+N T +L VDAMTGQ+A + TTFN +IGI G ILTKLDGD+RGGAALS+K V+GKPI
Sbjct: 212 NINVTYTVLTVDAMTGQDAVNVATTFNDKIGIDGVILTKLDGDTRGGAALSIKAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
G GE++ DLEPFYP RMA RILGMGDV S +EKAQ + E A+EM++K A+FDF
Sbjct: 272 LYAGMGEKLTDLEPFYPSRMASRILGMGDVESLIEKAQNAIDDEKAKEMEQKFRKASFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF++Q + +MG + ++ M+PGM V+ E + K +A+I++MTP ER +
Sbjct: 332 NDFMEQMDQLEKMGGIGDLLSMMPGMSS-QMKNVQIDEDAGKKPKAIIQSMTPNERCLKD 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+ SP R+KR+A +G +V++ + Q Q + MK + G+M G
Sbjct: 391 PI--SPSRKKRIADGAGVQIAEVNRFLKQFEQSKKMMKQMSGMMGG 434
>gi|1850607|gb|AAB48050.1|AAB48050 Ffh [Streptococcus mutans]
Length = 516
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/408 (48%), Positives = 286/408 (70%), Gaps = 11/408 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL IL
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKIL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGK---ITPAQVREAEKSLKIMEAMIEAMTPEEREK 357
DF++Q V MGSM ++ MIPGM + +V E E + K A++ +MTPEERE
Sbjct: 333 DFIEQLDQVQNMGSMEDILKMIPGMANNPALANVEVDEGEIARK--RAIVSSMTPEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 391 PDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|383764739|ref|YP_005443721.1| signal recognition particle protein [Caldilinea aerophila DSM 14535
= NBRC 104270]
gi|381385007|dbj|BAM01824.1| signal recognition particle protein [Caldilinea aerophila DSM 14535
= NBRC 104270]
Length = 463
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/407 (51%), Positives = 293/407 (71%), Gaps = 11/407 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ V +AVG +++ + P QQ+VKIV +EL++L+G +
Sbjct: 31 MREVRLALLEADVNYKVVKEFVERVKARAVGAEVMQSLTPAQQVVKIVHEELIELLG-KP 89
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L + P VI+L GLQG GKTT++AKLA LKK G+ +LVA D+YRPAAI QL +L
Sbjct: 90 APLNTSGPPPHVIMLVGLQGAGKTTMAAKLALRLKKNGQRPLLVAADIYRPAAIKQLEVL 149
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPVY+AGT+ S IAK L+ A++K +VVI+DTAGRLQID+A+M EL+ V+ V
Sbjct: 150 GAQIEVPVYSAGTQTPASTIAKDALKLAREKAYNVVIIDTAGRLQIDEALMQELEQVRLV 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P+++LLVVDAMTGQEA + FN + +TG I+TK+DGD+RGGAALSV++V+G PIK
Sbjct: 210 TRPSDILLVVDAMTGQEAVNVAEGFNARVPLTGLIMTKIDGDARGGAALSVRQVTGVPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ DLEPF P+R+AGRILGMGDVL+ +E+AQE + + A M+K+++ FDF
Sbjct: 270 FLGTGEKLPDLEPFDPERLAGRILGMGDVLTLIERAQENISADAAAAMEKRLVEGQFDFE 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGK----ITPAQVREAEKSLKIMEAMIEAMTPEERE 356
DFL+Q + V R+G ++ ++ MIPG+ + I P A+ SLK EA+I +MT +ER
Sbjct: 330 DFLEQLKQVKRLGPLTEILSMIPGLNRFAKEIDPTM---AQDSLKKTEAIINSMTIQERR 386
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 403
P++L S RR+R+A SG T Q V+ LV Q +M+ MK L GVM
Sbjct: 387 NPDILNAS--RRRRIAAGSGTTVQDVNTLVKQFREMQKMMKQL-GVM 430
>gi|422823584|ref|ZP_16871772.1| signal recognition particle protein [Streptococcus sanguinis SK405]
gi|324992911|gb|EGC24831.1| signal recognition particle protein [Streptococcus sanguinis SK405]
Length = 524
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 285/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ A PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKAPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|414160540|ref|ZP_11416806.1| signal recognition particle protein [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410878060|gb|EKS25949.1| signal recognition particle protein [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 455
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 295/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+A+G +++ + P QQ++KIV+DEL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKSFIKTVSERALGSDVMQSLTPGQQVIKIVKDELTQLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + A PTV+++ GLQG GKTT + KLA + KK K +LVA D+YRPAAIDQL
Sbjct: 92 ATVNMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAADIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +V+P QI L+ AK++++D VI+DTAGRL ID+ +M+EL +VK
Sbjct: 152 VGKQLDIPVYSEGDQVQPQQIVDNALKHAKEEHLDFVIIDTAGRLHIDEKLMNELAEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++G+TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 LSKPNEIMLVVDAMTGQDAVNVAQSFDDQLGVTGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + + A++++KK+ +A+F
Sbjct: 272 KFIGVSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDESKAKDLEKKMRTASFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGMGK+ ++ ++K + ++A+I++MT ERE+P
Sbjct: 332 DDFLEQLDQVKNLGPLDEIMKMIPGMGKMKGMDKLNMSDKQIDHIKAIIQSMTLAERERP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E+L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 EILNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|302389629|ref|YP_003825450.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosediminibacter oceani DSM 16646]
gi|302200257|gb|ADL07827.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosediminibacter oceani DSM 16646]
Length = 446
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/399 (50%), Positives = 280/399 (70%), Gaps = 3/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+Q V+E+AVG ++ + P QQ++KIV DEL KLMG +
Sbjct: 32 MREVKLALLEADVNYKVVKDFIQKVTERAVGQEVLESLTPAQQVIKIVNDELTKLMGPKE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L + S+ V+++ GLQG GKTT S KL YL K+GK +LVA D+YRPAAI QL ++
Sbjct: 92 ARLNISPSKVNVVMMVGLQGSGKTTTSGKLGLYLSKKGKRPLLVAADIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE++G+PV+T G E P I+K +E A + N DVVI+DTAGRL +D +M EL ++K
Sbjct: 152 GEKIGLPVFTMG-EQNPVNISKAAVEYASRHNNDVVIIDTAGRLHVDDELMQELINIKDA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+LLVVD+MTGQ+A + TF+ ++ +TG ILTKLDGD+RGGAALS+K V+G PIK
Sbjct: 211 VNPDEILLVVDSMTGQDAVNVAETFHNKLQLTGLILTKLDGDTRGGAALSIKAVTGCPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++ DLEPFYP+RMA RILGMGDVLS +EKA + Q A E+++KI F +
Sbjct: 271 FVGMGEKLTDLEPFYPERMASRILGMGDVLSLIEKATAAIDQNKARELEEKIRKEEFTLD 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL+Q + V +MGS+ +++ MIPG+ V EK L +EA+I +MT EER P +
Sbjct: 331 DFLEQLKQVRKMGSLDQILSMIPGLSPQKLQGVEFNEKELVHIEAIINSMTKEERMNPSI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S RR+R+A SG + Q V++L+ Q Q + +K L
Sbjct: 391 INGS--RRRRIAMGSGTSVQDVNRLLKQFEQTKKMVKQL 427
>gi|254852709|ref|ZP_05242057.1| signal recognition particle protein [Listeria monocytogenes FSL
R2-503]
gi|258606030|gb|EEW18638.1| signal recognition particle protein [Listeria monocytogenes FSL
R2-503]
Length = 467
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/395 (49%), Positives = 289/395 (73%), Gaps = 4/395 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIKTVSERAVGADVMKSLTPGQQVIKIVQEELTSLMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIGTADRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDELK VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDELKQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ PTE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+ME LE F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ +
Sbjct: 272 KFIATGEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKDNSMTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q + V +MG + ++ M+PG K+ + +K L +EA+I++MT E++ P
Sbjct: 332 DDFLEQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKNEKDNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
+++ S RRKR+A+ SG+ Q++++L+ Q +M+
Sbjct: 392 DIINAS--RRKRIARGSGRPVQEINRLLKQFGEMK 424
>gi|423222601|ref|ZP_17209071.1| signal recognition particle protein [Bacteroides cellulosilyticus
CL02T12C19]
gi|392641888|gb|EIY35661.1| signal recognition particle protein [Bacteroides cellulosilyticus
CL02T12C19]
Length = 439
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/402 (49%), Positives = 278/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKTFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ + +P VIL++GLQG GKTT S KLA LK K+ K +LVA DVYRPAAI+QL +
Sbjct: 91 AEIDL-EGKPAVILMSGLQGSGKTTFSGKLARMLKTKKNKKPLLVACDVYRPAAIEQLCV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+GVP+Y+ P +IA+ ++EAK K DVVIVDTAGRL +D+ MM+E+ +K+
Sbjct: 150 LAEQIGVPIYSEPDSKNPVKIAENAIQEAKAKGYDVVIVDTAGRLAVDEEMMNEIAAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RM+ RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPSRMSDRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP ER P
Sbjct: 330 NDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAERSNPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
LL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 389 LLNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|422876404|ref|ZP_16922874.1| signal recognition particle protein [Streptococcus sanguinis
SK1056]
gi|332361212|gb|EGJ39016.1| signal recognition particle protein [Streptococcus sanguinis
SK1056]
Length = 524
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 285/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT S KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFSGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|116495084|ref|YP_806818.1| Signal recognition particle GTPase [Lactobacillus casei ATCC 334]
gi|116105234|gb|ABJ70376.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus casei ATCC 334]
Length = 478
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/416 (48%), Positives = 287/416 (68%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ F++ V +A+G ++ + P QQ++KIV DELVK MG
Sbjct: 32 MREIRLALLEADVNFDVVKTFIKNVRTKALGAEVLESLTPSQQIIKIVNDELVKTMGEAA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++AGLQG GKTT KL+ YL + +L+A DVYRPAAIDQL
Sbjct: 92 VPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMDNDSARPLLIAADVYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+ELK++K
Sbjct: 152 IGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNELKNIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P ++LLV DAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAHPNDILLVDDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KAQ+ ++ A EM +KI +FDF
Sbjct: 272 KFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAQKNYDEKQAMEMAEKIRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
NDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+ERE P
Sbjct: 332 NDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQEREDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L L
Sbjct: 392 DLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDGL 441
>gi|18310695|ref|NP_562629.1| signal recognition particle protein [Clostridium perfringens str.
13]
gi|110800465|ref|YP_696400.1| signal recognition particle protein [Clostridium perfringens ATCC
13124]
gi|110802935|ref|YP_699000.1| signal recognition particle protein [Clostridium perfringens SM101]
gi|168207936|ref|ZP_02633941.1| signal recognition particle protein [Clostridium perfringens E str.
JGS1987]
gi|168210654|ref|ZP_02636279.1| signal recognition particle protein [Clostridium perfringens B str.
ATCC 3626]
gi|168214190|ref|ZP_02639815.1| signal recognition particle protein [Clostridium perfringens CPE
str. F4969]
gi|182625861|ref|ZP_02953627.1| signal recognition particle protein [Clostridium perfringens D str.
JGS1721]
gi|422874634|ref|ZP_16921119.1| signal recognition particle protein [Clostridium perfringens F262]
gi|18145376|dbj|BAB81419.1| signal recognition particle protein [Clostridium perfringens str.
13]
gi|110675112|gb|ABG84099.1| signal recognition particle protein [Clostridium perfringens ATCC
13124]
gi|110683436|gb|ABG86806.1| signal recognition particle protein [Clostridium perfringens SM101]
gi|170660749|gb|EDT13432.1| signal recognition particle protein [Clostridium perfringens E str.
JGS1987]
gi|170711297|gb|EDT23479.1| signal recognition particle protein [Clostridium perfringens B str.
ATCC 3626]
gi|170714291|gb|EDT26473.1| signal recognition particle protein [Clostridium perfringens CPE
str. F4969]
gi|177908895|gb|EDT71387.1| signal recognition particle protein [Clostridium perfringens D str.
JGS1721]
gi|380304275|gb|EIA16564.1| signal recognition particle protein [Clostridium perfringens F262]
Length = 452
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/388 (48%), Positives = 287/388 (73%), Gaps = 2/388 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV++F+ V ++ VG ++ + P QQ++KIV DEL LMG
Sbjct: 32 MREVKLALLEADVNFKVVKKFISNVKDKCVGEEVLNSLTPGQQVIKIVNDELTTLMGETE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L ++ + PTV +L GLQG GKTT++ KLA +L+K+ K +LVA D+YRPAAI QL ++
Sbjct: 92 SKLKYSDNGPTVFMLVGLQGAGKTTMAGKLALHLRKKNKKPLLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV++ G +VK IAK +E AK +VVI+DTAGRL ID+ +M ELKDVK V
Sbjct: 152 GKQIDIPVFSMGDKVKAVDIAKAAIEHAKDNGNNVVIIDTAGRLHIDEDLMQELKDVKEV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP+E+LLVVDAMTGQ+A + TFN + ++G ILTKLDGD+RGGAALS+++++GKPIK
Sbjct: 212 SNPSEILLVVDAMTGQDAVNVAETFNNSLDLSGIILTKLDGDTRGGAALSIRDITGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M D+E F+PDRMA RILGMGDVLS +EKAQ+ + Q++A ++ +K+++ F+F+
Sbjct: 272 FVGVGEKMSDIEVFHPDRMASRILGMGDVLSLIEKAQQAIDQDEASKLSEKMLNQEFNFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
D+L + ++G ++++I MIPG+ ++ + EK + ++A+I++MT +ER++P
Sbjct: 332 DYLSAMDQMKKLGPINKLIEMIPGVNTKELEGIDFSQGEKQMATVKAIIQSMTAKERKQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLV 386
L+ + R++R+A+ SG T Q+V++++
Sbjct: 392 SLVIGNGSRKRRIAKGSGTTVQEVNKVL 419
>gi|332877610|ref|ZP_08445354.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332684459|gb|EGJ57312.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 442
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/390 (50%), Positives = 278/390 (71%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL+ADV+ + + F V E+A+G ++ ++P Q +VKIV+DEL +LMGG+
Sbjct: 31 LKEVRRALLDADVNYKIAKDFTNTVKEKAIGQQVLTTLQPGQLMVKIVKDELTQLMGGDA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + PTVIL++GLQG GKTT S KLANYLK K+ K +LVA DVYRPAAIDQL I
Sbjct: 91 AGVNLS-GNPTVILMSGLQGSGKTTFSGKLANYLKTKKNKKPLLVACDVYRPAAIDQLHI 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGVPV++ P IA +GL AK+ +++VVIVDTAGRL +D+ MM+E+ ++ +
Sbjct: 150 VGEQVGVPVFSDKGNNNPVDIALKGLAYAKENHLNVVIVDTAGRLAVDEQMMNEISNIHQ 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+++K V KPI
Sbjct: 210 AIKPHETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAITIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ ++ FYPDRMA RILGMGDV+S VE+AQE +E A ++QKKI F F
Sbjct: 270 KFVGTGEKMDAIDVFYPDRMADRILGMGDVVSLVERAQEQFDEEQARKLQKKIAKNQFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +MTP+ER P
Sbjct: 330 DDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHSMTPKERSNPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
++ S R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 389 IIDMS--RKKRIAKGSGRELQEVNQLMKQF 416
>gi|419782775|ref|ZP_14308573.1| signal recognition particle protein [Streptococcus oralis SK610]
gi|383182988|gb|EIC75536.1| signal recognition particle protein [Streptococcus oralis SK610]
Length = 523
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIETLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGL +A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLAQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|296133550|ref|YP_003640797.1| signal recognition particle protein [Thermincola potens JR]
gi|296032128|gb|ADG82896.1| signal recognition particle protein [Thermincola potens JR]
Length = 450
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/392 (51%), Positives = 283/392 (72%), Gaps = 3/392 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ V E+A+G ++ + P QQ++KIV DEL +LMGG
Sbjct: 32 MREVRVALLEADVNYKVVKDFVKKVKERAIGAEVLGSLTPGQQVIKIVNDELTELMGGTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ + PTV++L GLQG GKTT KL N L+KQG+ +LVA DVYRPAAI QL +L
Sbjct: 92 SKITVSSKPPTVVMLVGLQGAGKTTTVGKLGNQLRKQGRRPLLVAADVYRPAAIKQLKVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ +PV++ G + P IAK +E AK D+V++DTAGRL I++ +M+ELK++K
Sbjct: 152 GEQLNIPVFSLGDKTNPVDIAKAAVEHAKSYGNDMVLIDTAGRLHINEELMEELKNIKES 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+L V+DA TGQ+A + TF+ ++GI G I+TKLDGD+RGGAALSVK V+GKPIK
Sbjct: 212 VKPHEILFVMDATTGQDAVNVAKTFDEQLGIDGVIITKLDGDTRGGAALSVKAVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++ LEPF+PDRMA RILGMGDVLS +EKAQ + A E+Q+KI S +++
Sbjct: 272 FVGMGEKLDALEPFFPDRMASRILGMGDVLSLIEKAQSTLDANKARELQQKIKSQDYNLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q R V +MG + +++GM+PGMG + + V+ EK + +EA+I++MTPEER P
Sbjct: 332 DFLEQMRQVRKMGPLDQILGMLPGMGNLKQLKDVQVDEKEMLHIEAIIQSMTPEERRNPS 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQ 391
++ +S R+KR+A+ SG V++L+ Q Q
Sbjct: 392 IIKDS--RKKRIAKGSGTKVSDVNKLLKQFDQ 421
>gi|253755628|ref|YP_003028768.1| signal recognition particle protein [Streptococcus suis BM407]
gi|251818092|emb|CAZ55886.1| signal recognition particle protein [Streptococcus suis BM407]
Length = 512
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/406 (48%), Positives = 285/406 (70%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E S
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAIGHEVIETLNPAQQIIKIVDEELTAVLGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++AGLQG GKTT + KLAN LK++ + +L+A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMAGLQGAGKTTFTGKLANKLKQEENARPLLIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G +V +I +QGLE+AK + D V++DTAGRLQID+A+M EL+++K
Sbjct: 153 GQQIDVPVFELGNQVPALEIVRQGLEQAKANHNDYVLIDTAGRLQIDQALMTELREIKEF 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ ITG ILTK+DGD+RGGAALSV+ ++G+PIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNDQLAITGVILTKIDGDTRGGAALSVRHITGQPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASKEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF+ Q V MG M ++ MIPGM G A ++ E+ + A++ +MTP ERE P+
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANLKVDEREIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--TPSRRRRIANGSGNSFVEVNKFIKDFNQAKTMMQ---GVMSG 433
>gi|423367889|ref|ZP_17345321.1| signal recognition particle protein [Bacillus cereus VD142]
gi|401082750|gb|EJP91015.1| signal recognition particle protein [Bacillus cereus VD142]
Length = 449
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/406 (49%), Positives = 293/406 (72%), Gaps = 8/406 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ VSE+AVG +++ + P QQ++KIV++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFIKRVSERAVGQDVMKSLTPGQQVIKIVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL ID+ +M EL VK
Sbjct: 152 LGKQLDMPVFSLGDKVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHIDEELMGELAKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ +E F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDAIEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKVERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+PE++ S R+KR+A+ SG T Q++++L+ Q M+ MK + G+
Sbjct: 390 QPEIINAS--RKKRIAKGSGTTVQEINRLIKQFDDMKKMMKTMTGM 433
>gi|418964864|ref|ZP_13516652.1| signal recognition particle protein [Streptococcus constellatus
subsp. constellatus SK53]
gi|383344265|gb|EID22434.1| signal recognition particle protein [Streptococcus constellatus
subsp. constellatus SK53]
Length = 524
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/409 (49%), Positives = 288/409 (70%), Gaps = 13/409 (3%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRMALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEAARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFSLGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNELRDVKVL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEERE 356
DF+ Q V MGSM ++ MIPGM PA +V E E + K A++ +MTP ERE
Sbjct: 333 DFIDQLDQVQNMGSMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSMTPAERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 390 NPNLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSVMQ---GVMSG 433
>gi|403061474|ref|YP_006649690.1| signal recognition particle protein [Streptococcus suis S735]
gi|402808800|gb|AFR00292.1| signal recognition particle protein [Streptococcus suis S735]
Length = 512
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/406 (48%), Positives = 285/406 (70%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E S
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAIGHEVIETLNPAQQIIKIVDEELTAVLGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++AGLQG GKTT + KLAN LK++ + +L+A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMAGLQGAGKTTFTGKLANKLKQEENARPLLIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G +V +I +QGLE+AK + D V++DTAGRLQID+A+M EL+++K
Sbjct: 153 GQQIDVPVFELGNQVPALEIVRQGLEQAKANHNDYVLIDTAGRLQIDQALMTELREIKEF 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ ITG ILTK+DGD+RGGAALSV+ ++G+PIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNDQLAITGVILTKIDGDTRGGAALSVRHITGQPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASKEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF+ Q V MG M ++ MIPGM G A ++ E+ + A++ +MTP ERE P+
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANLKVDEREIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--TPSRRRRIANGSGNSFVEVNKFIKDFNQAKTMMQ---GVMSG 433
>gi|146318530|ref|YP_001198242.1| Signal recognition particle GTPase [Streptococcus suis 05ZYH33]
gi|146320726|ref|YP_001200437.1| Signal recognition particle GTPase [Streptococcus suis 98HAH33]
gi|253751657|ref|YP_003024798.1| signal recognition particle protein [Streptococcus suis SC84]
gi|253753559|ref|YP_003026700.1| signal recognition particle protein [Streptococcus suis P1/7]
gi|386577837|ref|YP_006074243.1| Signal recognition particle protein [Streptococcus suis GZ1]
gi|386579891|ref|YP_006076296.1| Signal recognition particle GTPase [Streptococcus suis JS14]
gi|386581850|ref|YP_006078254.1| Signal recognition particle GTPase [Streptococcus suis SS12]
gi|386588081|ref|YP_006084482.1| Signal recognition particle GTPase [Streptococcus suis A7]
gi|145689336|gb|ABP89842.1| Signal recognition particle GTPase [Streptococcus suis 05ZYH33]
gi|145691532|gb|ABP92037.1| Signal recognition particle GTPase [Streptococcus suis 98HAH33]
gi|251815946|emb|CAZ51560.1| signal recognition particle protein [Streptococcus suis SC84]
gi|251819805|emb|CAR45741.1| signal recognition particle protein [Streptococcus suis P1/7]
gi|292558300|gb|ADE31301.1| Signal recognition particle protein [Streptococcus suis GZ1]
gi|319758083|gb|ADV70025.1| Signal recognition particle GTPase [Streptococcus suis JS14]
gi|353733996|gb|AER15006.1| Signal recognition particle GTPase [Streptococcus suis SS12]
gi|354985242|gb|AER44140.1| Signal recognition particle GTPase [Streptococcus suis A7]
Length = 512
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/406 (48%), Positives = 285/406 (70%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E S
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAIGHEVIETLNPAQQIIKIVDEELTAVLGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++AGLQG GKTT + KLAN LK++ + +L+A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMAGLQGAGKTTFTGKLANKLKQEENARPLLIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G +V +I +QGLE+AK + D V++DTAGRLQID+A+M EL+++K
Sbjct: 153 GQQIDVPVFELGNQVPALEIVRQGLEQAKANHNDYVLIDTAGRLQIDQALMTELREIKEF 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ ITG ILTK+DGD+RGGAALSV+ ++G+PIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNDQLAITGVILTKIDGDTRGGAALSVRHITGQPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASKEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF+ Q V MG M ++ MIPGM G A ++ E+ + A++ +MTP ERE P+
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANLKVDEREIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--TPSRRRRIANGSGNSFVEVNKFIKDFNQAKTMMQ---GVMSG 433
>gi|335030020|ref|ZP_08523519.1| signal recognition particle protein [Streptococcus infantis SK1076]
gi|334267482|gb|EGL85942.1| signal recognition particle protein [Streptococcus infantis SK1076]
Length = 521
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ + E+A+G +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKIRERAIGHEVIDTLNPAQQIIKIVNEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLA+ LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLAHKLKKEEDARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVIDAMIGQEAANVAREFNDQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRMA RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMASRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ EK + A++ +MT EERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDEKQIARKRAIVSSMTSEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--TPSRRRRIAAGSGNTFIEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|330996193|ref|ZP_08320083.1| signal recognition particle protein [Paraprevotella xylaniphila YIT
11841]
gi|329573697|gb|EGG55288.1| signal recognition particle protein [Paraprevotella xylaniphila YIT
11841]
Length = 451
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 276/402 (68%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G ++ V+P Q +VKIV DEL LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKTFTDTVKQKALGQNVLTAVKPSQLMVKIVHDELATLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+EL + P+VIL+AGL G GKTT+S KLA LK K+ K+ +L A D+YRPAAI+QL +
Sbjct: 91 AELNL-QGHPSVILMAGLNGAGKTTLSGKLALMLKSKKRKNPLLAACDIYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+G+PVY+ QIA+ ++EAK K DVVIVDTAGRL +D+ MM E+ +K
Sbjct: 150 LGEQIGIPVYSEPDNKDAVQIAQNAVKEAKAKGYDVVIVDTAGRLAVDEQMMQEIAAIKH 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 GINPDETLFVVDAMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME ++ F+P RMA RILGMGD++S VEKAQE +E+A +QKKI FDF
Sbjct: 270 KFVGTGEKMEAIDQFHPSRMADRILGMGDIVSLVEKAQEQYDEEEARRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF+ Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP ER PE
Sbjct: 330 NDFMSQIQQIKKMGNLKDLASMIPGVGKAL-KDVEIDDNAFKSIEAIIQSMTPRERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 389 ILNTS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|342732348|ref|YP_004771187.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384455751|ref|YP_005668346.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417962271|ref|ZP_12604520.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-2]
gi|417962397|ref|ZP_12604607.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-3]
gi|417965566|ref|ZP_12607074.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-4]
gi|417968297|ref|ZP_12609330.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-co]
gi|418016250|ref|ZP_12655815.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418372604|ref|ZP_12964696.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342329803|dbj|BAK56445.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345506585|gb|EGX28879.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984094|dbj|BAK79770.1| signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380330716|gb|EIA21901.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-2]
gi|380336378|gb|EIA26396.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-4]
gi|380337762|gb|EIA26772.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-3]
gi|380339962|gb|EIA28617.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-co]
gi|380342273|gb|EIA30718.1| Signal recognition particle protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
Length = 454
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/406 (46%), Positives = 291/406 (71%), Gaps = 4/406 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLE+DV+ VV+ F+ +VSE+++G ++ + P QQ++KIV DEL +MG +
Sbjct: 32 MREVKLALLESDVNYRVVKTFISSVSEKSLGKEVLESLTPAQQVIKIVNDELKAIMGNDQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L + + T+I+L GLQG GKTT++AKL+ Y +K GK+ +++A DVYRPAA+ QL +L
Sbjct: 92 SKLNYNVNGTTIIMLVGLQGAGKTTMAAKLSLYCRKSGKTPLMIACDVYRPAAVKQLEVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ +PV++ P I K+GLEEA+K +VVI+DTAGRL ID A+M+ELK++K +
Sbjct: 152 GNQINIPVFSIPDSKDPLYIVKKGLEEAEKNMNNVVIIDTAGRLHIDDALMNELKEIKEL 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P+E+L+V+D+M GQE+ + TFN ++ +TG +LTKLDGD+RGG ALS+KEV GK IK
Sbjct: 212 SDPSEILMVIDSMIGQESVNIAETFNDKLDVTGFVLTKLDGDTRGGVALSIKEVIGKNIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ DLE F+PDRMA RILGMGDVLS +EKAQE + Q++A+++ +++++ F+F
Sbjct: 272 FIGVGEKIGDLEVFHPDRMASRILGMGDVLSLIEKAQEAIDQDEAQKLSERMLANEFNFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEAMIEAMTPEERE 356
DF + + ++GS S+++ MIPG G ++ + ++EK L +EA+I +MT +ER+
Sbjct: 332 DFKSAMQQMKKIGSFSKILQMIPGFGNSMKELKNINLDDSEKELCKIEAIINSMTIKERK 391
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
P+LL S R+ R+A+ SG T QV++L+ M MK G+
Sbjct: 392 NPKLLMGSASRKSRIAKGSGSTVNQVNKLIKDFENMSKMMKQFKGM 437
>gi|315613041|ref|ZP_07887952.1| signal recognition particle protein [Streptococcus sanguinis ATCC
49296]
gi|315315151|gb|EFU63192.1| signal recognition particle protein [Streptococcus sanguinis ATCC
49296]
Length = 523
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+V +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTKVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLV+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|402298804|ref|ZP_10818465.1| signal recognition particle protein [Bacillus alcalophilus ATCC
27647]
gi|401726012|gb|EJS99267.1| signal recognition particle protein [Bacillus alcalophilus ATCC
27647]
Length = 452
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/401 (47%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F+ +V E+A+G +++ + P QQ++K+V +EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKQFIASVKEKALGQEVMKSLTPGQQVIKVVNEELTALMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ PTV+++ GLQG GKTT +AKLAN+L KK ++ MLVA D+YRPAAI QL
Sbjct: 92 SKIAVNNKPPTVVMMVGLQGAGKTTTTAKLANHLRKKHNRNPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+++ D V++DTAGRL ID+ +MDEL+ VK
Sbjct: 152 LGKQLSMPVFSLGDQVSPVEIAKQAIAKAKEEHHDYVLIDTAGRLHIDEKLMDELQQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAA+SVK V+ PI
Sbjct: 212 IAKPDEILLVVDAMTGQDAVNVAESFNEQLDVTGVVLTKLDGDTRGGAAISVKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A E++KK+ + + F
Sbjct: 272 KFAGMGEKIDQLEPFHPERMASRILGMGDVLTLIEKAQMNVDEEKARELEKKMKNMDITF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q V MG + ++ M+PGM K+ + ++ +K + +EA++ +MTP E++ P
Sbjct: 332 DDFLDQLDQVRNMGPLDELLNMMPGMNKMKGMKDLKVDDKQIGHVEAIVRSMTPMEKQDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ S R++R+A+ SG + Q+V++L+ Q +M+ MK +
Sbjct: 392 SIMNAS--RKRRIAKGSGTSIQEVNRLLKQFDEMKKMMKQM 430
>gi|288802708|ref|ZP_06408146.1| signal recognition particle protein [Prevotella melaninogenica D18]
gi|288334858|gb|EFC73295.1| signal recognition particle protein [Prevotella melaninogenica D18]
Length = 450
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/421 (48%), Positives = 286/421 (67%), Gaps = 11/421 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKTFTDTVKQKALGMNVLTAVKPGQLMVKIVHDELAELMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L + RP++IL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAIDQL +
Sbjct: 91 VGLNLS-GRPSIILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAIDQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGV VY+ ++IA L EAK K D+VI+DTAGRL +D+ MM+E++ +K
Sbjct: 150 VGEQVGVAVYSEPENKNVNEIADHALAEAKAKGHDIVIIDTAGRLAVDEEMMNEIESLKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 HVHPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG------SLPALSN 413
LL S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P + N
Sbjct: 389 LLNNS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTGSKMAGMMSKMKGMPGMPN 446
Query: 414 L 414
+
Sbjct: 447 M 447
>gi|57866688|ref|YP_188386.1| signal recognition particle protein [Staphylococcus epidermidis
RP62A]
gi|242242520|ref|ZP_04796965.1| signal recognition particle protein [Staphylococcus epidermidis
W23144]
gi|418613018|ref|ZP_13176039.1| signal recognition particle protein [Staphylococcus epidermidis
VCU117]
gi|418626769|ref|ZP_13189365.1| signal recognition particle protein [Staphylococcus epidermidis
VCU126]
gi|418630376|ref|ZP_13192858.1| signal recognition particle protein [Staphylococcus epidermidis
VCU128]
gi|418634110|ref|ZP_13196508.1| signal recognition particle protein [Staphylococcus epidermidis
VCU129]
gi|420174994|ref|ZP_14681440.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM061]
gi|420177373|ref|ZP_14683709.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM057]
gi|420179856|ref|ZP_14686132.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM053]
gi|420189842|ref|ZP_14695801.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM037]
gi|420191715|ref|ZP_14697626.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM023]
gi|420204159|ref|ZP_14709719.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM015]
gi|420234397|ref|ZP_14738960.1| signal recognition particle protein [Staphylococcus epidermidis
NIH051475]
gi|57637346|gb|AAW54134.1| signal recognition particle protein [Staphylococcus epidermidis
RP62A]
gi|242234028|gb|EES36340.1| signal recognition particle protein [Staphylococcus epidermidis
W23144]
gi|374817328|gb|EHR81513.1| signal recognition particle protein [Staphylococcus epidermidis
VCU117]
gi|374831313|gb|EHR95055.1| signal recognition particle protein [Staphylococcus epidermidis
VCU126]
gi|374837917|gb|EHS01475.1| signal recognition particle protein [Staphylococcus epidermidis
VCU128]
gi|374838102|gb|EHS01659.1| signal recognition particle protein [Staphylococcus epidermidis
VCU129]
gi|394244527|gb|EJD89869.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM061]
gi|394247757|gb|EJD92999.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM057]
gi|394252334|gb|EJD97371.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM053]
gi|394259957|gb|EJE04783.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM037]
gi|394265866|gb|EJE10513.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM023]
gi|394274173|gb|EJE18598.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM015]
gi|394304200|gb|EJE47607.1| signal recognition particle protein [Staphylococcus epidermidis
NIH051475]
Length = 455
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+A+G +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFVKTVSERALGSDVMQSLTPGQQVIKIVQEELTSLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + A PTV+++ GLQG GKTT + KLA + KK K +LVAGD+YRPAAIDQL
Sbjct: 92 TSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +V P QI + L+ AK++++D VI+DTAGRL ID+ +M+EL++VK
Sbjct: 152 VGKQIDIPVYSEGDQVSPQQIVENALKHAKEEHLDFVIIDTAGRLHIDETLMNELQEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVSGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP+ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPKERSNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 ETLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|296330813|ref|ZP_06873288.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674331|ref|YP_003866003.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151818|gb|EFG92692.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412575|gb|ADM37694.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 446
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/407 (49%), Positives = 301/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQDVMKSLTPGQQVIKVVKEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT S KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVAKKPPTVIMMVGLQGAGKTTTSGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID +MDEL +VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDELTNVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 IANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ + +F
Sbjct: 272 KFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT E+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVLEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 DIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|297584012|ref|YP_003699792.1| signal recognition particle protein [Bacillus selenitireducens
MLS10]
gi|297142469|gb|ADH99226.1| signal recognition particle protein [Bacillus selenitireducens
MLS10]
Length = 449
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/404 (48%), Positives = 293/404 (72%), Gaps = 4/404 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++FV V E+AVG ++ + P QQ++K+V +EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKKFVADVKERAVGQDVMESLTPGQQVIKVVNEELTRLMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTV+++ GLQG GKTT + KLANYL+K + +LVA D+YRPAAI QL
Sbjct: 92 SKINTASKPPTVVMMVGLQGAGKTTTTGKLANYLRKNHNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IA++ +E AK+++ D V++DTAGRL ID +MDEL+ VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIARKAVEHAKEEHHDYVLIDTAGRLHIDNELMDELQQVKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P EVLLVVDAMTGQ+A + +FN ++ ++G +LTKLDGD+RGGAA+SVK V+ PI
Sbjct: 212 EVKPDEVLLVVDAMTGQDAVNVAESFNEQLELSGVVLTKLDGDTRGGAAISVKAVTDTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPF+P+RMA RILGMGDVLS +EKAQ + ++ A E+++K+ + + F
Sbjct: 272 KFAGMGEKIDQLEPFHPERMASRILGMGDVLSLIEKAQTGVDEDKARELERKMRTNDLSF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + ++ M+PG GK+ + V+ +K L +EA++++MT ERE P
Sbjct: 332 DDFLEQLAQVKEMGPLDEILNMMPGAGKMKGLKNVQVDDKQLAHIEAIVKSMTKYERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
++ S R+KR+A+ SG++ Q+V++L+ Q +M+ MK + G+
Sbjct: 392 SVMNAS--RKKRIAKGSGRSIQEVNRLLKQFEEMKKMMKQMTGM 433
>gi|425736820|ref|ZP_18855096.1| signal recognition particle protein [Staphylococcus massiliensis
S46]
gi|425483292|gb|EKU50444.1| signal recognition particle protein [Staphylococcus massiliensis
S46]
Length = 457
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/401 (47%), Positives = 292/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VS++A+G +++ + P QQ++KIV+DEL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKNFVKTVSDRALGSDVMKSLTPGQQVIKIVQDELTELMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S + AK PTV+++ GLQG GKTT + KLA + KK K +LVA D+YRPAAI+QL
Sbjct: 92 SSITMAKKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAADIYRPAAINQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI ++ AK++++D VI+DTAGRL ID+ +M EL+D+K
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVDNAIKHAKEEHLDFVIIDTAGRLHIDEGLMSELEDIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ +TG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ITKPNEIMLVVDAMTGQDAVNVAESFDNQLDVTGVTLTKLDGDTRGGAALSIRAVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGD+LS +EKAQ+ + QE A++++KK+ +++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDMLSLIEKAQQDVDQEKAKDLEKKMRTSSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q V +G + ++ MIPGM K+ ++ +EK + ++A+I++MT ERE P
Sbjct: 332 DDFLVQLDQVKNLGPLDDIMKMIPGMNKVKGLDKMNMSEKQIDHIKAIIQSMTKYEREHP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E + S R+KR+A+ SG++ Q+V++++ Q M+ MK
Sbjct: 392 EKINVS--RKKRIAKGSGRSLQEVNRILKQFNDMKKIMKQF 430
>gi|354559586|ref|ZP_08978833.1| signal recognition particle protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353541223|gb|EHC10692.1| signal recognition particle protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 465
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/399 (50%), Positives = 281/399 (70%), Gaps = 4/399 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+++G ++ + P Q ++KIV +E+V LMG
Sbjct: 31 MREVRMALLEADVNYKVVKEFVAKVKERSIGQEVLESLSPAQHVIKIVNEEMVALMGSVS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ + PTVILL GLQG GKTT +AKLA LKKQGK ++VA D+YRPAA+ QL +L
Sbjct: 91 SKINISSKPPTVILLVGLQGAGKTTHAAKLATLLKKQGKHPLMVACDIYRPAAVKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV++ E P +IA++ + A + DVVI+DTAGRL I++ +M EL+D+K
Sbjct: 151 GEQIKVPVFSIDGE-NPVKIAQESIRHANSQGQDVVIIDTAGRLHINEELMGELRDIKAT 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +F+ E+G+ G ILTKLDGD+RGGAALS+K V+G PIK
Sbjct: 210 VRPHEILLVVDAMTGQDAVNVAESFHSELGVDGIILTKLDGDTRGGAALSIKAVTGCPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+ME LEPFYP+RMA RILGMGDVL+ +EKAQ ++ A EM++K+ F +
Sbjct: 270 FAGIGEKMEALEPFYPERMASRILGMGDVLTLIEKAQSAFDEKQAREMEQKLRKQEFTLD 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG +S ++ MIPG+GK V+ EK +EA+I +MT EER KP +
Sbjct: 330 DFLDQMQQIKKMGPLSSILEMIPGVGK-QLKDVQIDEKDTAHVEAIIRSMTTEERRKPAI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ +S R++R+A+ SG + Q+V +L+ Q QM+ MK
Sbjct: 389 IKDS--RKRRIAKGSGTSIQEVGRLIKQFEQMQKMMKQF 425
>gi|452974499|gb|EME74319.1| signal recognition particle protein [Bacillus sonorensis L12]
Length = 446
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/407 (50%), Positives = 299/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQDVMKSLTPGQQVIKVVKEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT + KLAN L KK ++ +LVA D+YRPAAI QL
Sbjct: 92 SKIAAAKRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRNPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG Q+ +PV++ G +V P IAKQ +E+AK+ + D VI+DTAGRL ID+ +MDELK VK
Sbjct: 152 LGRQLDMPVFSLGDQVSPVDIAKQAIEKAKEDHHDYVIIDTAGRLHIDEELMDELKKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
P E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 TSQPDEIFLVVDSMTGQDAVNVAKSFNEQLGVTGVILTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQANVDEEKAKELEQKMKTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I++MT +E+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLDELIQMMPGAGKMKGLKNVKVDEKQLSHVEAIIKSMTGKEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
E++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 EIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMTKG 436
>gi|417989876|ref|ZP_12630374.1| signal recognition particle, subunit Ffh [Lactobacillus casei
A2-362]
gi|410537018|gb|EKQ11600.1| signal recognition particle, subunit Ffh [Lactobacillus casei
A2-362]
Length = 478
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/416 (48%), Positives = 286/416 (68%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ F++ V +A+G ++ + P QQ++KIV DELVK MG
Sbjct: 32 MREIRLALLEADVNFDVVKTFIKNVRTKALGAEVLESLTPSQQIIKIVNDELVKTMGEAA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++AGLQG GKTT KL+ YL + +L+A DVYRPAAIDQL
Sbjct: 92 VPLNKAPHIPTVIMMAGLQGAGKTTTVGKLSKYLMDNDSARPLLIAADVYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV+ GT+V P +I +QGL AK+ D V++DTAGRLQID+ +M+ELK++K
Sbjct: 152 IGKQLNVPVFEMGTDVDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNELKNIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P ++LLVVDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAHPNDILLVVDAMTGQAAVDVAKGFNEQLDITGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M+ L+ FYPDRMA RILGMGD+L+ ++KA ++ A EM +KI +FDF
Sbjct: 272 KFIGQGEKMDALDVFYPDRMANRILGMGDMLTLIDKAXXNYDEKQAMEMAEKIRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
NDFL Q +++MG + ++ MIPGM A V+ K + M+A++ +MTP+ERE P
Sbjct: 332 NDFLDQMDQISKMGPLEDIMKMIPGMANNKALANVKMDPKDIAHMKAIVYSMTPQEREDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+LL +P RR+R+A SG+ +V++++ Q Q K +M M G++ L L
Sbjct: 392 DLL--NPSRRRRLAAGSGRPVVEVNRMIKQFNQ----SKQMMNQMSKGNMKGLDGL 441
>gi|407977615|ref|ZP_11158452.1| signal recognition particle protein [Bacillus sp. HYC-10]
gi|407415868|gb|EKF37449.1| signal recognition particle protein [Bacillus sp. HYC-10]
Length = 446
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/407 (50%), Positives = 301/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQEVMKSLTPGQQVIKVVKEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT + KLAN L KK + M+VA D+YRPAAI QL
Sbjct: 92 SKIAVAKKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMMVAADIYRPAAIQQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID+ +M EL+ VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHHDYVILDTAGRLHIDEELMGELQKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 VANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + Q+ A+E+++K+ + +F
Sbjct: 272 KFAALGEKLDALEPFHPERMASRILGMGDVLTLIEKAQANVDQDKAKELEQKMRTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I++MT EE+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLDELIQMMPGAGKMKGLKNVQVDEKQLNHIEAIIKSMTTEEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
E++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 EVINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|365157114|ref|ZP_09353395.1| signal recognition particle protein [Bacillus smithii 7_3_47FAA]
gi|363625848|gb|EHL76859.1| signal recognition particle protein [Bacillus smithii 7_3_47FAA]
Length = 446
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/401 (50%), Positives = 297/401 (74%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQEVMKSLTPGQQVIKVVKEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTV+++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SQIAVAKRPPTVVMMVGLQGAGKTTTTGKLANLLRKKYNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IA++ +E+AK+++ D V++DTAGRL ID+ +M+ELK ++
Sbjct: 152 LGKQLNMPVFSLGDQVSPVEIAQKAIEKAKEEHYDYVLIDTAGRLHIDENLMEELKQIQS 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LTKPEEIFLVVDAMTGQDAVNVAQSFDEQLGITGVILTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+M+ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+++++KI + +F
Sbjct: 272 KFAGMGEKMDALEPFHPERMASRILGMGDVLTLIEKAQASVDEEKAKQLEQKIRTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q V MG + ++ MIPGM +I ++ EK + +EA+I +MT EE+E P
Sbjct: 332 DDFLDQLGQVRSMGPLDELLKMIPGMNRIKGLNNIQIDEKQISHVEAIIRSMTKEEKEHP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E++ S RRKR+A+ SG T Q+V++L+ Q +M+ MK +
Sbjct: 392 EIINSS--RRKRIAKGSGTTIQEVNRLLKQFEEMKKMMKQM 430
>gi|298386283|ref|ZP_06995839.1| signal recognition particle protein [Bacteroides sp. 1_1_14]
gi|298260660|gb|EFI03528.1| signal recognition particle protein [Bacteroides sp. 1_1_14]
Length = 440
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/398 (49%), Positives = 276/398 (69%), Gaps = 5/398 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKTFTDTVKEKAIGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
E+ +SRP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 VEINL-ESRPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y+ P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+ +K
Sbjct: 150 LAEQIEVPMYSELDSKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEITAIKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN+ + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPDEILFVVDSMTGQDAVNTAKEFNVRLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP ER PE
Sbjct: 330 NDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAERSNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 389 ILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|345884305|ref|ZP_08835714.1| signal recognition particle protein [Prevotella sp. C561]
gi|345042866|gb|EGW46957.1| signal recognition particle protein [Prevotella sp. C561]
Length = 515
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/421 (48%), Positives = 286/421 (67%), Gaps = 11/421 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 96 LKDVRRALLDADVNYKVAKSFTDTVKQKALGMNVLTAVKPGQLMVKIVHDELAELMGGEA 155
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L + RP++IL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAIDQL +
Sbjct: 156 VGLNLS-GRPSIILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAIDQLKV 214
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGV VY+ ++IA L EAK K DVVI+DTAGRL +D+ MM+E++ +K
Sbjct: 215 VGEQVGVAVYSEPENKNVNEIADHALAEAKAKGNDVVIIDTAGRLAVDEEMMNEIESLKN 274
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 275 HVHPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTVVTKPI 334
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI FDF
Sbjct: 335 KFIGTGEKMEAIDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQKNQFDF 394
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 395 NDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKERTNPE 453
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG------SLPALSN 413
LL S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P + N
Sbjct: 454 LLNNS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTGSKMAGMMSKMKGMPGMPN 511
Query: 414 L 414
+
Sbjct: 512 M 512
>gi|417698687|ref|ZP_12347859.1| signal recognition particle protein [Streptococcus pneumoniae
GA41317]
gi|419493436|ref|ZP_14033162.1| signal recognition particle protein [Streptococcus pneumoniae
GA47210]
gi|419506198|ref|ZP_14045859.1| signal recognition particle protein [Streptococcus pneumoniae
GA49194]
gi|421227494|ref|ZP_15684198.1| signal recognition particle protein [Streptococcus pneumoniae
2072047]
gi|421268335|ref|ZP_15719205.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR95]
gi|332200732|gb|EGJ14804.1| signal recognition particle protein [Streptococcus pneumoniae
GA41317]
gi|379593611|gb|EHZ58423.1| signal recognition particle protein [Streptococcus pneumoniae
GA47210]
gi|379608112|gb|EHZ72858.1| signal recognition particle protein [Streptococcus pneumoniae
GA49194]
gi|395595196|gb|EJG55430.1| signal recognition particle protein [Streptococcus pneumoniae
2072047]
gi|395869830|gb|EJG80944.1| signal recognition particle protein [Streptococcus pneumoniae
SPAR95]
Length = 523
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MT EERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTSEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|418327699|ref|ZP_12938841.1| signal recognition particle protein [Staphylococcus epidermidis
14.1.R1.SE]
gi|365232729|gb|EHM73715.1| signal recognition particle protein [Staphylococcus epidermidis
14.1.R1.SE]
Length = 455
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+A+G +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFVKTVSERALGSDVMQSLTPGQQVIKIVQEELTSLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + A PTV+++ GLQG GKTT + KLA + KK K +LVAGD+YRPAAIDQL
Sbjct: 92 TSIKMANKPPTVVMMIGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +V P QI + L+ AK++++D VI+DTAGRL ID+ +M+EL++VK
Sbjct: 152 VGKQIDIPVYSEGDQVSPQQIVENALKHAKEEHLDFVIIDTAGRLHIDETLMNELQEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVSGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP+ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPKERSNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 ETLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|357014337|ref|ZP_09079336.1| Ffh [Paenibacillus elgii B69]
Length = 455
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/416 (48%), Positives = 288/416 (69%), Gaps = 3/416 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VV+ F+ V EQA+G +++ P +V IV EL LMGG
Sbjct: 32 LREVRLALLEADVNFKVVKEFIAKVKEQAIGQEVLQSFTPAMVVVDIVNKELTALMGGTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L A PTVI++ GLQG GKTT + KLA L +Q +L AGD+YRPAAI QL +L
Sbjct: 92 SKLARANKPPTVIMMVGLQGAGKTTTTGKLAKLLLQQNHRPLLAAGDIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV++ G +V P +IAKQ L+ AK N D +IVDTAGRL ID+++M+ELK +
Sbjct: 152 GEQLKVPVFSLGDKVSPVEIAKQALQHAKDHNNDYLIVDTAGRLHIDESLMEELKQIVEA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P E+LLVVDAMTGQ+A + +F+ ++ +TG +LTKLDGD+RGGAA+SVK V+G PIK
Sbjct: 212 VSPDEILLVVDAMTGQDAVNVAESFHKQLELTGVVLTKLDGDTRGGAAISVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ LEPF+P+RMA RILGMGD+L+ +EKAQ + + A+EM++K+ +A F F+
Sbjct: 272 FAAMGEKLDALEPFHPERMASRILGMGDMLTLIEKAQASIDADKAKEMERKLRTAEFTFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V ++G + +++ M+PG GKI + V+ +K + + A++++MT EER+ P+
Sbjct: 332 DFLEQMEQVKKLGPLDQLLDMLPGAGKIKGMKDVKVDDKQMSRVAAIVKSMTKEERQNPD 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 415
LL+ S RRKR+A SG + Q V++ + Q MR MK G+M L NL+
Sbjct: 392 LLSTS--RRKRLAAGSGNSVQDVNRFIKQFEDMRKMMKQFSGMMGPKGAKQLKNLK 445
>gi|416124362|ref|ZP_11595358.1| signal recognition particle protein [Staphylococcus epidermidis
FRI909]
gi|418615160|ref|ZP_13178109.1| signal recognition particle protein [Staphylococcus epidermidis
VCU118]
gi|420199023|ref|ZP_14704707.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM031]
gi|319401472|gb|EFV89682.1| signal recognition particle protein [Staphylococcus epidermidis
FRI909]
gi|374818234|gb|EHR82402.1| signal recognition particle protein [Staphylococcus epidermidis
VCU118]
gi|394272709|gb|EJE17159.1| signal recognition particle protein [Staphylococcus epidermidis
NIHLM031]
Length = 455
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 293/401 (73%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+A+G +++ + P QQ++KIV++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFVKTVSERALGSDVMQSLTPGQQVIKIVQEELTSLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + A PTV+++ GLQG GKTT + KLA + KK K +LVAGD+YRPAAIDQL
Sbjct: 92 TSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +V P QI + L+ AK++++D VI+DTAGRL ID+ +M+EL++VK
Sbjct: 152 VGKQIDIPVYSEGDQVPPQQIVENALKHAKEEHLDFVIIDTAGRLHIDETLMNELQEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVSGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ+ + QE A++++KK+ ++F
Sbjct: 272 KFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPGM K+ ++ ++K + ++A+I++MTP+ER P
Sbjct: 332 DDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPKERSNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E L S R+KR+A+ SG++ Q+V++L+ Q M+ MK
Sbjct: 392 ETLNVS--RKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQF 430
>gi|422854257|ref|ZP_16900921.1| signal recognition particle protein [Streptococcus sanguinis SK160]
gi|325696493|gb|EGD38383.1| signal recognition particle protein [Streptococcus sanguinis SK160]
Length = 524
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 285/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEDNARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|254974797|ref|ZP_05271269.1| signal recognition particle protein [Clostridium difficile
QCD-66c26]
gi|255092185|ref|ZP_05321663.1| signal recognition particle protein [Clostridium difficile CIP
107932]
gi|260682859|ref|YP_003214144.1| signal recognition particle protein [Clostridium difficile CD196]
gi|260209022|emb|CBA62118.1| signal recognition particle protein [Clostridium difficile CD196]
Length = 452
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/423 (47%), Positives = 287/423 (67%), Gaps = 11/423 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F++ V E+ VG +++ + P Q ++KIV +EL LMG
Sbjct: 32 MREVKLALLEADVNFKVVKDFIKKVQERCVGQEVMQSLTPAQHVIKIVNEELTSLMGDVQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+++ + PT++++ GLQG GKTT + KL Y KKQGK +LVA D+YRPAAI QL ++
Sbjct: 92 SKVMISSKPPTILMMVGLQGAGKTTTAGKLGGYFKKQGKKPLLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE++ +PV+ G + P IAK GL A K D+VI+DTAGRL ID+ +M ELK +K
Sbjct: 152 GEKLDIPVFNMGDKENPVNIAKAGLSHAIKNANDLVIIDTAGRLHIDEVLMAELKSIKSE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAALSIRAVTQKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E+++KI DF
Sbjct: 272 FMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELEQKIKKQELDFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+Q + MG + +++GMIPGMG + V K +K +A+I++MT ER P
Sbjct: 332 DFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAIIQSMTTYERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG-------GSLPAL 411
+L S R+KR+A+ SG + Q V++L+ QL +M+ MK G + G LP L
Sbjct: 392 GVLNAS--RKKRIAKGSGTSVQDVNRLIKQLNEMKKMMKMFAGSQKSMKKRGGLGGLPFL 449
Query: 412 SNL 414
+ +
Sbjct: 450 NKI 452
>gi|387784255|ref|YP_006070338.1| signal recognition particle subunit FFH/SRP54 (Srp54)
[Streptococcus salivarius JIM8777]
gi|338745137|emb|CCB95503.1| signal recognition particle subunit FFH/SRP54 (Srp54)
[Streptococcus salivarius JIM8777]
Length = 520
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 282/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + QQ++KIV +EL +++G E S
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDASQQIIKIVNEELTEILGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE+ +I K GLE+A+ D V++DTAGRLQID+ +M EL D+K
Sbjct: 153 GQQINVPVFDMGTEIPAVEIVKNGLEQARANKNDYVLIDTAGRLQIDETLMQELHDIKDF 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 AHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|350265910|ref|YP_004877217.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|384175339|ref|YP_005556724.1| signal recognition particle protein [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|449094290|ref|YP_007426781.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
XF-1]
gi|349594563|gb|AEP90750.1| signal recognition particle protein [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|349598797|gb|AEP86585.1| signal recognition particle protein [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|449028205|gb|AGE63444.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
XF-1]
Length = 446
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/407 (49%), Positives = 301/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQDVMKSLTPGQQVIKVVKEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT S KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVAKRPPTVIMMVGLQGAGKTTTSGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID +MDEL +VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDELTNVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 IANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ + +F
Sbjct: 272 KFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT E+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVLEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 DIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|347750524|ref|YP_004858089.1| signal recognition particle protein [Bacillus coagulans 36D1]
gi|347583042|gb|AEO99308.1| signal recognition particle protein [Bacillus coagulans 36D1]
Length = 447
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/408 (49%), Positives = 301/408 (73%), Gaps = 4/408 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++KIV++EL LMGG
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQDVLKSLTPGQQVIKIVQEELTNLMGGSQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT S KLAN L KK ++ +LVA D+YRPAAI QL
Sbjct: 92 SKIAVAKRPPTVIMMVGLQGAGKTTTSGKLANLLRKKYNRTPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+G+PV++ G ++ P +IA+Q +E+AK+++ D VI+DTAGRL ID +M+ELK++K
Sbjct: 152 LGKQLGMPVFSLGDKISPVEIARQAIEKAKEEHHDTVIIDTAGRLHIDSELMNELKEIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+ LVVDAMTGQ+A + +FN ++GITG ILTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 LAHPDEIFLVVDAMTGQDAVNVAQSFNDQLGITGVILTKLDGDTRGGAALSIRAVTEKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+M+ LEPF+P+RMA RILGMGD+LS +EKAQE + +E A ++KK+ +F
Sbjct: 272 KFAGMGEKMDALEPFHPERMASRILGMGDILSLIEKAQETVDEEKARALEKKMRDQSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +MG + ++ MIPG ++ ++ EK + +EA+I++MT +E+ +P
Sbjct: 332 DDFLEQLGQVRKMGPLGDILKMIPGANRMKGMDNLQIDEKQIAHVEAIIQSMTKQEKIRP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
+++ S R+KR+A+ SG+ Q+V++L+ Q +M+ MK L G+ + G
Sbjct: 392 DIINAS--RKKRIAKGSGRPVQEVNRLLKQFEEMKKMMKQLQGMNQKG 437
>gi|338811281|ref|ZP_08623506.1| signal recognition particle protein [Acetonema longum DSM 6540]
gi|337276750|gb|EGO65162.1| signal recognition particle protein [Acetonema longum DSM 6540]
Length = 449
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/417 (50%), Positives = 285/417 (68%), Gaps = 6/417 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VV+ FV V E+A+G ++ + P QQ+VKIV DEL LMGG
Sbjct: 32 LREVRMALLEADVNFKVVKDFVSRVKERAIGQEVMDSLTPGQQVVKIVYDELAALMGGTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L + PTVI+L GLQG GKTT + KLAN L++Q K +LVA DVYRPAAI QL +L
Sbjct: 92 SRLNISSRPPTVIMLVGLQGAGKTTTAGKLANLLQRQNKRPLLVAADVYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV+T G + P IA++ +++A DVVI+DTAGRL I++ +M EL+ +K
Sbjct: 152 GQQLDIPVFTLGDQESPVTIAQKSIDQANALLRDVVIIDTAGRLHINEELMQELRLIKGQ 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAMTGQ+A + FN ++G+ G ILTKLDGD+RGGAALS+K V+G PIK
Sbjct: 212 AKPHEILLVVDAMTGQDAVGVAEAFNGQLGLDGVILTKLDGDARGGAALSIKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++ LEPFYPDRMA RILGMGDVL +EKAQ + + A E++KK+ +F F+
Sbjct: 272 FAGMGEKLDALEPFYPDRMASRILGMGDVLGLIEKAQASLDLDKARELEKKLRKDSFTFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTPEEREK 357
DFL+Q + V ++GSM +++ MIPGMG Q++ A EK LK EA+I +MT +ER+
Sbjct: 332 DFLEQLQQVRKLGSMEQILSMIPGMGS-QLKQLKNAELDEKDLKRTEAIIRSMTKKERQD 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P L+ S RRKR+A SG Q V++L+ Q + R MK + + G P NL
Sbjct: 391 PALINGS--RRKRIASGSGTKVQDVNRLLKQFEETRKMMKRFQLMQKSGRKPKGFNL 445
>gi|294500961|ref|YP_003564661.1| signal recognition particle protein [Bacillus megaterium QM B1551]
gi|295706307|ref|YP_003599382.1| signal recognition particle protein [Bacillus megaterium DSM 319]
gi|384045187|ref|YP_005493204.1| signal recognition particle-like (SRP) component [Bacillus
megaterium WSH-002]
gi|294350898|gb|ADE71227.1| signal recognition particle protein [Bacillus megaterium QM B1551]
gi|294803966|gb|ADF41032.1| signal recognition particle protein [Bacillus megaterium DSM 319]
gi|345442878|gb|AEN87895.1| Signal recognition particle-like (SRP) component [Bacillus
megaterium WSH-002]
Length = 447
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 291/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVSERAVGQDVLKSLTPGQQVIKVVQEELTALMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK ++ +LVA D+YRPAAI QL
Sbjct: 92 SKIAVAPKAPTVIMMVGLQGAGKTTTTGKLANLLRKKYNRNPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ + V++ G +V P +IAKQ + AK+++ D V++DTAGRL +D+ +M+EL+ +K
Sbjct: 152 LGKQLSMSVFSLGDQVSPVEIAKQAIAHAKEEHHDYVLIDTAGRLHVDENLMEELEQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+ LVVDAMTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 LSNPDEIFLVVDAMTGQDAVNVADSFNKQLGLTGVVLTKLDGDTRGGAALSIRAVTDTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ +E F+P+RMA RILGMGDVL+ +EKAQ + E A+E++ K+ + +F F
Sbjct: 272 KFVGLGEKMDAIEAFHPERMASRILGMGDVLTLIEKAQANVDAEKAKELEAKLRTQSFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q V +MG + +IGM+PG K+ + ++ EK + +EA+I +MT E+ P
Sbjct: 332 DDFLDQLAQVRQMGPLDELIGMLPGANKVKGLKNLQVDEKQINHVEAIIRSMTKAEKTNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E++ S RRKR+A+ SG++ Q+V++L+ Q M+ MK +
Sbjct: 392 EIINAS--RRKRIAKGSGRSVQEVNRLLKQFEDMKKMMKQM 430
>gi|422860148|ref|ZP_16906792.1| signal recognition particle protein [Streptococcus sanguinis SK330]
gi|327470046|gb|EGF15510.1| signal recognition particle protein [Streptococcus sanguinis SK330]
Length = 524
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 285/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKSL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|419453246|ref|ZP_13993219.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP03]
gi|379626955|gb|EHZ91571.1| signal recognition particle protein [Streptococcus pneumoniae
EU-NP03]
Length = 514
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 24 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 83
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 84 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 143
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 144 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 203
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 204 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 263
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 264 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 323
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MT EERE P
Sbjct: 324 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTSEERENP 382
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 383 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 424
>gi|417093101|ref|ZP_11957490.1| signal recognition particle protein [Streptococcus suis R61]
gi|353531997|gb|EHC01674.1| signal recognition particle protein [Streptococcus suis R61]
Length = 524
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/406 (48%), Positives = 285/406 (70%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E S
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAIGHEVIETLNPAQQIIKIVDEELTAVLGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++AGLQG GKTT + KLAN LK++ + +L+A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMAGLQGAGKTTFTGKLANKLKQEENARPLLIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G +V +I +QGLE+AK + D V++DTAGRLQID+A+M EL+++K
Sbjct: 153 GQQIDVPVFELGNQVPALEIVRQGLEQAKANHNDYVLIDTAGRLQIDQALMAELREIKEF 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ ITG ILTK+DGD+RGGAALSV+ ++G+PIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNDQLAITGVILTKIDGDTRGGAALSVRHITGQPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASKEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF+ Q V MG M ++ MIPGM G A ++ E+ + A++ +MTP ERE P+
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANLKVDEREIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--TPSRRRRIANGSGNSFVEVNKFIKDFNQAKTMMQ---GVMSG 433
>gi|262037316|ref|ZP_06010787.1| signal recognition particle protein [Leptotrichia goodfellowii
F0264]
gi|261748664|gb|EEY36032.1| signal recognition particle protein [Leptotrichia goodfellowii
F0264]
Length = 445
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/419 (47%), Positives = 292/419 (69%), Gaps = 15/419 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ V + FV + ++A+G +I+GV P QQ +KIV DELV+++GG
Sbjct: 31 LREVRLALLEADVNYGVAKNFVAKIRDKALGEEVIKGVNPTQQFIKIVHDELVEVLGG-- 88
Query: 61 SELVFAKS--RPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLV 118
+ ++ AKS PT+++L+GLQG GKTT + KL+ +LK +G+S L+ DVYRPAA QL
Sbjct: 89 TNVLIAKSPKAPTIVMLSGLQGAGKTTFAGKLSKHLKSKGESPFLIGADVYRPAAKKQLK 148
Query: 119 ILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVK 178
+L EQV VP +T +I K+G+EEAK + VI+DTAGRL +D+ +M+EL+++K
Sbjct: 149 VLAEQVKVPSFTIDESTDVIEICKKGIEEAKNAHATYVIIDTAGRLHVDEQLMEELQNIK 208
Query: 179 RVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKP 238
NP E+LLVVD MTGQ+A + TFN + ITG +LTKLDGD+RGGAALSVKEV+GKP
Sbjct: 209 STFNPHEILLVVDGMTGQDAVNVAKTFNDRLDITGVVLTKLDGDTRGGAALSVKEVAGKP 268
Query: 239 IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 298
IK + GE+++D+ PF+PDR+A RILGMGDV+S VEKAQE + + +A++M++K FD
Sbjct: 269 IKFISEGEKLDDIAPFHPDRLASRILGMGDVVSLVEKAQEAIDENEAKKMEEKFRKNQFD 328
Query: 299 FNDFLKQTRTVARMGSMSRVIGMIPGM--GKITPAQVREAEKSLKIMEAMIEAMTPEERE 356
F DFLKQ + + +MGS++ ++ MIPG+ G I A AEK +K +E +I +MT +ER
Sbjct: 329 FEDFLKQFKMIRKMGSLAGIMKMIPGVDTGAIDMAM---AEKEMKRVEGIIFSMTVQERR 385
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 415
P++L S R+ R+A+ SG V++L+ Q Q MK +M + G++P L ++
Sbjct: 386 DPKILNGS--RKIRIAKGSGVEVNDVNRLIKQFEQ----MKQMMKMFNSGAIPGLGGMK 438
>gi|259503527|ref|ZP_05746429.1| signal recognition particle protein [Lactobacillus antri DSM 16041]
gi|259168605|gb|EEW53100.1| signal recognition particle protein [Lactobacillus antri DSM 16041]
Length = 480
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/417 (48%), Positives = 285/417 (68%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A G +++G+ P QQ+VKIV DEL KLMG E
Sbjct: 32 MREIRLALLEADVNFTVVKDFVKTVREKAAGAEVLKGLNPAQQIVKIVNDELTKLMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++ GLQG GKTT + KLA LK + + M +A DVYRPAAI QL
Sbjct: 92 VPLNKAAHIPTVIMMVGLQGAGKTTTAGKLALRLKNEDHARPMFIAADVYRPAAITQLQQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ Q+ VPV+ GT+V P +I ++G+E AK+ + D VI+DTAGRLQID+ +MDEL ++K
Sbjct: 152 VAAQIDVPVFEKGTDVDPVEIVREGMEVAKQNHNDYVIIDTAGRLQIDEQLMDELANIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+++P E+LLV+D+MTGQ A F+ ++ ITG +LTKLDGD+RGGAA+S++ V+GKPI
Sbjct: 212 LVHPDEILLVIDSMTGQNAVNTAQGFDDKLDITGVVLTKLDGDTRGGAAMSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M DL+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E K+ FD+
Sbjct: 272 KFVGEGEKMSDLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETMDKMRENTFDY 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q V +MG + ++ M+PGM PA V K ++A++ +MTP ERE
Sbjct: 332 NDFLAQMDQVTKMGPLENILKMMPGMAN-NPALKNVNLDPKQFAHIKAIVLSMTPAEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+L+ +P RR+R+A SG+ +V++++ Q QMR MK + G++ + NL
Sbjct: 391 PDLM--NPSRRRRLAAGSGRPIVEVNRMIKQFNQMRKMMKQV----TNGNMSGMQNL 441
>gi|398304074|ref|ZP_10507660.1| signal recognition particle protein [Bacillus vallismortis DV1-F-3]
Length = 446
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/407 (49%), Positives = 300/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQDVMKSLTPGQQVIKVVQEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT S KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAAAKKPPTVIMMVGLQGAGKTTTSGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDELTSVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 IANPEEIFLVVDSMTGQDAVNVAQSFNEQLGLTGVVLTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ + +F
Sbjct: 272 KFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT E+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVREKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 DIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|253573492|ref|ZP_04850835.1| signal recognition particle protein [Paenibacillus sp. oral taxon
786 str. D14]
gi|251847020|gb|EES75025.1| signal recognition particle protein [Paenibacillus sp. oral taxon
786 str. D14]
Length = 458
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/404 (49%), Positives = 281/404 (69%), Gaps = 3/404 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F+ V E+AVG ++ P ++ IV EL +LMGG
Sbjct: 32 MREVRLALLEADVNFKVVKEFIAKVKEKAVGKEVMDSFTPGMVIIDIVNKELTELMGGSQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L + PTV+++AGLQG GKTT SAKLA L K+ +LVAGD+YRPAAI QL +L
Sbjct: 92 AKLARSNRPPTVVMMAGLQGAGKTTTSAKLAKLLLKENHRPLLVAGDIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV+T P +IA+Q L+ AK D V++DTAGRL +D+ +M+EL+ + V
Sbjct: 152 GEQIKVPVFTLPEGNSPVEIARQALQHAKDNGNDYVLIDTAGRLHVDEELMEELRQIHEV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP EVLLVVDAMTGQ+A + +FN ++ +TG +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 TNPDEVLLVVDAMTGQDAVNVAESFNQQLTLTGVVLTKLDGDTRGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ LEPF+P+RMA RILGMGD+LS +EKAQ + E A+EM++K+ +A F F
Sbjct: 272 FAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQANIDAEKAKEMERKMRNAEFTFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V ++G + +++ MIPGMGK+ Q V+ EK + +EA++ +MT EE++ P+
Sbjct: 332 DFLEQMEQVKKLGPLDQLMDMIPGMGKMKQMQNVKVDEKQMSRVEAIVHSMTKEEKQNPD 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 403
++ S RRKR+A SG T V++L+ Q +MR MK +M
Sbjct: 392 MINHS--RRKRIAAGSGTTLADVNRLIKQFDEMRRVMKQFSDMM 433
>gi|386758321|ref|YP_006231537.1| signal recognition particle protein [Bacillus sp. JS]
gi|384931603|gb|AFI28281.1| signal recognition particle protein [Bacillus sp. JS]
Length = 446
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/407 (49%), Positives = 301/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQDVMKSLTPGQQVIKVVQEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT S KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVAKRPPTVIMMVGLQGAGKTTTSGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID +MDEL +VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDELTNVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 IANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT E+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVLEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 DIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|422862537|ref|ZP_16909169.1| signal recognition particle protein [Streptococcus sanguinis SK408]
gi|327474237|gb|EGF19644.1| signal recognition particle protein [Streptococcus sanguinis SK408]
Length = 524
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 285/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|323351581|ref|ZP_08087235.1| signal recognition particle protein [Streptococcus sanguinis VMC66]
gi|322122067|gb|EFX93793.1| signal recognition particle protein [Streptococcus sanguinis VMC66]
Length = 524
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 285/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|148985187|ref|ZP_01818426.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP3-BS71]
gi|387757611|ref|YP_006064590.1| signal recognition particle protein [Streptococcus pneumoniae
OXC141]
gi|418232322|ref|ZP_12858909.1| signal recognition particle protein [Streptococcus pneumoniae
GA07228]
gi|418236782|ref|ZP_12863350.1| signal recognition particle protein [Streptococcus pneumoniae
GA19690]
gi|419480169|ref|ZP_14019975.1| signal recognition particle protein [Streptococcus pneumoniae
GA19101]
gi|419499865|ref|ZP_14039559.1| signal recognition particle protein [Streptococcus pneumoniae
GA47597]
gi|147922632|gb|EDK73750.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP3-BS71]
gi|301800200|emb|CBW32808.1| signal recognition particle protein [Streptococcus pneumoniae
OXC141]
gi|353887049|gb|EHE66829.1| signal recognition particle protein [Streptococcus pneumoniae
GA07228]
gi|353893014|gb|EHE72762.1| signal recognition particle protein [Streptococcus pneumoniae
GA19690]
gi|379570740|gb|EHZ35701.1| signal recognition particle protein [Streptococcus pneumoniae
GA19101]
gi|379599173|gb|EHZ63956.1| signal recognition particle protein [Streptococcus pneumoniae
GA47597]
gi|429316237|emb|CCP35909.1| signal recognition particle protein [Streptococcus pneumoniae
SPN034156]
gi|429319579|emb|CCP32862.1| signal recognition particle protein [Streptococcus pneumoniae
SPN034183]
gi|429321396|emb|CCP34836.1| signal recognition particle protein [Streptococcus pneumoniae
SPN994039]
gi|429323216|emb|CCP30877.1| signal recognition particle protein [Streptococcus pneumoniae
SPN994038]
Length = 523
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKVL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MT EERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTSEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|223932139|ref|ZP_03624143.1| signal recognition particle protein [Streptococcus suis 89/1591]
gi|302023761|ref|ZP_07248972.1| signal recognition particle protein [Streptococcus suis 05HAS68]
gi|330832793|ref|YP_004401618.1| signal recognition particle protein [Streptococcus suis ST3]
gi|386584059|ref|YP_006080462.1| signal recognition particle protein [Streptococcus suis D9]
gi|223899120|gb|EEF65477.1| signal recognition particle protein [Streptococcus suis 89/1591]
gi|329307016|gb|AEB81432.1| signal recognition particle protein [Streptococcus suis ST3]
gi|353736205|gb|AER17214.1| signal recognition particle protein [Streptococcus suis D9]
Length = 524
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/406 (48%), Positives = 285/406 (70%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E S
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAIGHEVIETLNPAQQIIKIVDEELTAVLGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++AGLQG GKTT + KLAN LK++ + +L+A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMAGLQGAGKTTFTGKLANKLKQEENARPLLIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G +V +I +QGLE+AK + D V++DTAGRLQID+A+M EL+++K
Sbjct: 153 GQQIDVPVFELGNQVPALEIVRQGLEQAKANHNDYVLIDTAGRLQIDQALMAELREIKEF 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ ITG ILTK+DGD+RGGAALSV+ ++G+PIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNDQLAITGVILTKIDGDTRGGAALSVRHITGQPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASKEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF+ Q V MG M ++ MIPGM G A ++ E+ + A++ +MTP ERE P+
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANLKVDEREIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--TPSRRRRIANGSGNSFVEVNKFIKDFNQAKTMMQ---GVMSG 433
>gi|422858480|ref|ZP_16905130.1| signal recognition particle protein [Streptococcus sanguinis
SK1057]
gi|327460366|gb|EGF06703.1| signal recognition particle protein [Streptococcus sanguinis
SK1057]
Length = 524
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 285/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARLLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE+ +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEIPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|422870940|ref|ZP_16917433.1| signal recognition particle protein [Streptococcus sanguinis
SK1087]
gi|328946321|gb|EGG40465.1| signal recognition particle protein [Streptococcus sanguinis
SK1087]
Length = 524
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 285/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|422884204|ref|ZP_16930653.1| signal recognition particle protein [Streptococcus sanguinis SK49]
gi|332360637|gb|EGJ38446.1| signal recognition particle protein [Streptococcus sanguinis SK49]
Length = 524
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 285/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKTL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|379727454|ref|YP_005319639.1| signal recognition particle protein [Melissococcus plutonius
DAT561]
gi|376318357|dbj|BAL62144.1| signal recognition particle protein [Melissococcus plutonius
DAT561]
Length = 471
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/392 (50%), Positives = 282/392 (71%), Gaps = 6/392 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L V++ FV+ V E+AVG ++ + P QQ+VKIV +EL K +G E
Sbjct: 32 MREIRLALLEADVNLQVIKDFVKRVRERAVGTEVLESLTPAQQIVKIVDEELTKTLGSEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PT+I++AGLQG GKTT + KLANYL KQ + +++A DVYRPAAI+QL +
Sbjct: 92 VGLNKAPKIPTIIMMAGLQGAGKTTFTGKLANYLIKQENARPLMIAADVYRPAAIEQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GTE+ P +I +QG+ AK+K D V++DTAGRL ID+A+MDELK +K
Sbjct: 152 LGQQLDVPVFDKGTEINPVEIVRQGIALAKEKKNDYVLIDTAGRLHIDEALMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLD D+RGGAALS++ V+G PI
Sbjct: 212 LAQPNEILLVVDAMTGQDAVNVAESFNQQLGITGVVITKLDSDTRGGAALSIRAVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++ DLE F+PDRM+ RILGMGD+L+ +EKAQ+ ++ AEE+ KK+ F+F
Sbjct: 272 KYVGSGEKLTDLEVFHPDRMSSRILGMGDMLTLIEKAQQDYDEKKAEELAKKMNENRFNF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDF++Q V MG + ++ MIPGM + P ++ K ++ A++ +MTP ERE
Sbjct: 332 NDFIEQLDQVMGMGPLEDLVKMIPGMNNM-PGMDNIKVDPKDIERKRAIVFSMTPAEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
P+LL +P RR+R+A SG + +V++++ Q
Sbjct: 391 PDLL--NPSRRRRIAAGSGNSVIEVNRMIKQF 420
>gi|422821249|ref|ZP_16869442.1| signal recognition particle protein [Streptococcus sanguinis SK353]
gi|324991163|gb|EGC23097.1| signal recognition particle protein [Streptococcus sanguinis SK353]
Length = 524
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 285/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPAFKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|428279192|ref|YP_005560927.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. natto BEST195]
gi|430758979|ref|YP_007209700.1| signal recognition particle protein [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|291484149|dbj|BAI85224.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. natto BEST195]
gi|430023499|gb|AGA24105.1| Signal recognition particle protein [Bacillus subtilis subsp.
subtilis str. BSP1]
Length = 446
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/407 (49%), Positives = 301/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQDVMKSLTPGQQVIKVVQEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT S KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVAKRPPTVIMMVGLQGAGKTTTSGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID +MDEL +VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDELTNVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 IANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ + +F
Sbjct: 272 KFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT E+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVLEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 DIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|212703525|ref|ZP_03311653.1| hypothetical protein DESPIG_01570 [Desulfovibrio piger ATCC 29098]
gi|212673025|gb|EEB33508.1| signal recognition particle protein [Desulfovibrio piger ATCC
29098]
Length = 502
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/405 (49%), Positives = 280/405 (69%), Gaps = 6/405 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VV+ FV+ V ++ +G LI+GV P QQ+VKIV +ELV L+GGE
Sbjct: 31 LREVRLALLEADVNFKVVKDFVENVRQKCLGQELIKGVSPAQQVVKIVHEELVGLLGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L P VI+L GLQG GKTT + K+AN L+KQ LV DVYRPAAIDQL +L
Sbjct: 91 AGLNLQGQEPAVIMLVGLQGSGKTTSAGKIANLLRKQKMRPYLVPADVYRPAAIDQLTVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
+Q+ +P + + ++ P IA+Q +E A+++ VV++DTAGRL +D+ +M EL +K
Sbjct: 151 AKQLDMPCFPSTVDMNPVDIARQAMEAAREQQATVVLLDTAGRLHVDEPLMQELAAIKAA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+L V DAMTGQ+A + +FN +G+TG +LTK+DGD+RGGAALS++ V+G P+K
Sbjct: 211 VNPQEILFVADAMTGQDAVTVAESFNERLGLTGVVLTKMDGDARGGAALSIRAVTGAPVK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++ ++E F+PDR+AGRILGMGDVL+ VEKAQ + ++AE + KK+ A+FD
Sbjct: 271 FVGMGEKLSEMEIFHPDRIAGRILGMGDVLTLVEKAQATIDADEAEALAKKMRKASFDLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEAMIEAMTPEERE 356
DF Q R + ++GS+ ++ MIPGMG K+ A EK + EA+I +MT ER
Sbjct: 331 DFRTQMRRIKKLGSLDSILKMIPGMGGLREKLAEANGAMPEKEMARTEAIINSMTMAERR 390
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
P++L S RR R+A+ +G T QQV+QLV Q QMR MK +MG
Sbjct: 391 NPDILNGS--RRARIAKGAGVTVQQVNQLVRQFEQMRQMMKGMMG 433
>gi|366089288|ref|ZP_09455761.1| signal recognition particle protein [Lactobacillus acidipiscis KCTC
13900]
Length = 477
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/416 (48%), Positives = 291/416 (69%), Gaps = 8/416 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V +AVG ++ + P QQ+VKIV +ELVK+MG +
Sbjct: 32 MREIRLALLEADVNFGVVKDFVKTVRGRAVGAEILESLTPAQQIVKIVNEELVKVMGEQA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L + PTVI++ GLQG GKTT ++KLA LK +Q +++A DVYRPAAIDQL
Sbjct: 92 VPLNKSPKIPTVIMMVGLQGAGKTTTASKLALKLKNEQNARPLMIAADVYRPAAIDQLKT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG + +PV+ GT+V P +I ++GL+ A++ D V +DTAGRLQID+ +M EL D+++
Sbjct: 152 LGAENDLPVFDMGTDVSPVKIVEEGLKVAEENKNDYVFIDTAGRLQIDEKLMQELADIQK 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P EVLL VD+MTGQ A + FN ++ ITG ILTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LASPDEVLLTVDSMTGQNATEVAEGFNEQLNITGVILTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M DL+ FYPDRMA RILGMGD+++ +EKAQ ++ A+++Q+K+ + FDF
Sbjct: 272 KFIGQGEKMADLDVFYPDRMASRILGMGDMMTLIEKAQRDYDEKKAQDLQEKMRANTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPEEREKP 358
NDFL+Q V MGSM ++ MIPGM + + + K + +A++ +MTP+ERE P
Sbjct: 332 NDFLEQLDQVQNMGSMEDIMKMIPGMANNSALKNASIDPKDMDHTKAIVYSMTPQEREDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
++L P RR+R+A SG++ Q+V++L+ Q QMR ++M + G+ + NL
Sbjct: 392 DIL--KPSRRRRIAAGSGRSVQEVNRLIKQFKQMR----DMMAKVSNGNFSGMENL 441
>gi|125717990|ref|YP_001035123.1| SRP54, signal recognition particle GTPase protein [Streptococcus
sanguinis SK36]
gi|125497907|gb|ABN44573.1| SRP54, signal recognition particle GTPase protein, putative
[Streptococcus sanguinis SK36]
Length = 524
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 285/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|261367302|ref|ZP_05980185.1| signal recognition particle protein [Subdoligranulum variabile DSM
15176]
gi|282570905|gb|EFB76440.1| signal recognition particle protein [Subdoligranulum variabile DSM
15176]
Length = 451
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/400 (52%), Positives = 278/400 (69%), Gaps = 6/400 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ V + F VSE+A+G ++ + P QQ+VKIV +EL KLMGG+
Sbjct: 32 MREVRMALLEADVNYKVAKDFCAQVSERAMGQEVMESLTPAQQVVKIVNEELTKLMGGDE 91
Query: 61 SELVFAKSR-PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + K++ TV+++ GLQG GKTT +AKL Y + QG+ +LVA DVYRPAAI QL I
Sbjct: 92 PQYLHIKNKGQTVLMMCGLQGNGKTTHAAKLGKYYRSQGRRPLLVACDVYRPAAIQQLQI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ GVPV+T GTE KP IA+Q + A+ D+VI+DTAGRLQID A+MDEL +K
Sbjct: 152 VGEQAGVPVFTMGTE-KPEHIAQQAMAHARDHGNDIVILDTAGRLQIDDALMDELVRIKE 210
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ E LLVVDAM GQEA + TFN +IGITG +LTK DGD+RGGAALSV V+GKPI
Sbjct: 211 AVEVDETLLVVDAMAGQEAVNVAKTFNEKIGITGVVLTKTDGDTRGGAALSVLAVTGKPI 270
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
G GE++EDLEPFYP RMA RILGMGDVLS +EKAQ V ++AE +++M FD
Sbjct: 271 YFQGTGEKLEDLEPFYPSRMASRILGMGDVLSLIEKAQSVQNDKEAEAAARRMMENKFDM 330
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
ND L Q + V +MG S ++ M+PG +I + +K L +EA+I +MTP ER KPE
Sbjct: 331 NDLLAQFQQVKKMGGASALLAMMPGGNQIDADALD--DKMLPRIEAIIYSMTPAERAKPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ +P R++R+A SG+T + V++L+ Q M+ MK +
Sbjct: 389 II--NPKRKRRIAAGSGQTVEAVNKLLRQYEMMQKMMKKV 426
>gi|255313924|ref|ZP_05355507.1| signal recognition particle protein [Clostridium difficile
QCD-76w55]
gi|255516603|ref|ZP_05384279.1| signal recognition particle protein [Clostridium difficile
QCD-97b34]
gi|255649703|ref|ZP_05396605.1| signal recognition particle protein [Clostridium difficile
QCD-37x79]
gi|260686457|ref|YP_003217590.1| signal recognition particle protein [Clostridium difficile R20291]
gi|384360448|ref|YP_006198300.1| signal recognition particle protein [Clostridium difficile BI1]
gi|260212473|emb|CBE03380.1| signal recognition particle protein [Clostridium difficile R20291]
Length = 450
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/403 (48%), Positives = 280/403 (69%), Gaps = 4/403 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F++ V E+ VG +++ + P Q ++KIV +EL LMG
Sbjct: 32 MREVKLALLEADVNFKVVKDFIKKVQERCVGQEVMQSLTPAQHVIKIVNEELTSLMGDVQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+++ + PT++++ GLQG GKTT + KL Y KKQGK +LVA D+YRPAAI QL ++
Sbjct: 92 SKVMISSKPPTILMMVGLQGAGKTTTAGKLGGYFKKQGKKPLLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE++ +PV+ G + P IAK GL A K D+VI+DTAGRL ID+ +M ELK +K
Sbjct: 152 GEKLDIPVFNMGDKENPVNIAKAGLSHAIKNANDLVIIDTAGRLHIDEVLMAELKSIKSE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + +FN +G+ G +LTKLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAALSIRAVTQKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+++D+EPF+PDRMA RILGMGDVLS +EKAQE + E A+E+++KI DF
Sbjct: 272 FMGMGEKLDDIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELEQKIKKQELDFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+Q + MG + +++GMIPGMG + V K +K +A+I++MT ER P
Sbjct: 332 DFLQQMEQIQNMGPLDKILGMIPGMGNVKDQLGDVDLNGKEMKRTKAIIQSMTTYERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S R+KR+A+ SG + Q V++L+ QL +M+ MK G
Sbjct: 392 GVLNAS--RKKRIAKGSGTSVQDVNRLIKQLNEMKKMMKMFAG 432
>gi|422848695|ref|ZP_16895371.1| signal recognition particle protein [Streptococcus sanguinis SK115]
gi|325689716|gb|EGD31720.1| signal recognition particle protein [Streptococcus sanguinis SK115]
Length = 524
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 285/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|262282312|ref|ZP_06060080.1| signal recognition particle protein [Streptococcus sp. 2_1_36FAA]
gi|262261603|gb|EEY80301.1| signal recognition particle protein [Streptococcus sp. 2_1_36FAA]
Length = 524
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/440 (46%), Positives = 296/440 (67%), Gaps = 26/440 (5%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKVNHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M +I M+PGM PA + E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLIKMLPGMAS-NPALKNFKVDEREIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVME------------- 404
+LL +P RR+R+A SG + V++ + Q + M+ ++ G M
Sbjct: 392 DLL--TPSRRRRIANGSGNSFVDVNKFIKDFNQSKQLMQGVLSGDMSKMMKQMGLNPNNM 449
Query: 405 ------GGSLPALSNLEDAL 418
GG++P +S L+D +
Sbjct: 450 PKNMPGGGAMPDMSALQDMM 469
>gi|16078661|ref|NP_389480.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
subsp. subtilis str. 168]
gi|221309473|ref|ZP_03591320.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. 168]
gi|221313798|ref|ZP_03595603.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221318722|ref|ZP_03600016.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221322993|ref|ZP_03604287.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. SMY]
gi|321315364|ref|YP_004207651.1| signal recognition particle protein [Bacillus subtilis BSn5]
gi|402775843|ref|YP_006629787.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
QB928]
gi|418033256|ref|ZP_12671733.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|452914716|ref|ZP_21963343.1| signal recognition particle protein [Bacillus subtilis MB73/2]
gi|586037|sp|P37105.1|SRP54_BACSU RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|2309080|dbj|BAA21691.1| Ffh [Bacillus subtilis]
gi|2633970|emb|CAB13471.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
subsp. subtilis str. 168]
gi|320021638|gb|ADV96624.1| signal recognition particle protein [Bacillus subtilis BSn5]
gi|351469404|gb|EHA29580.1| signal recognition particle-like (SRP) component [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|402481025|gb|AFQ57534.1| Signal recognition particle-like (SRP) GTPase [Bacillus subtilis
QB928]
gi|407959004|dbj|BAM52244.1| signal recognition particle-like (SRP) GTPase [Synechocystis sp.
PCC 6803]
gi|407964581|dbj|BAM57820.1| signal recognition particle-like (SRP) GTPase [Bacillus subtilis
BEST7003]
gi|452117136|gb|EME07531.1| signal recognition particle protein [Bacillus subtilis MB73/2]
Length = 446
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/407 (49%), Positives = 301/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQDVMKSLTPGQQVIKVVQEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT S KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAVAKRPPTVIMMVGLQGAGKTTTSGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID +MDEL +VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDELTNVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 IANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ + +F
Sbjct: 272 KFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT E+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVLEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 DIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|239826589|ref|YP_002949213.1| signal recognition particle protein [Geobacillus sp. WCH70]
gi|239806882|gb|ACS23947.1| signal recognition particle protein [Geobacillus sp. WCH70]
Length = 446
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/391 (49%), Positives = 288/391 (73%), Gaps = 4/391 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVSERAVGQEVLKSLTPGQQVIKVVKEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L+K+ + +L A D+YRPAAI QL
Sbjct: 92 SKIAVASRPPTVIMMVGLQGAGKTTTTGKLANLLRKRYNRKPLLAAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D V++DTAGRL ID+ +MDELK +K
Sbjct: 152 LGKQLNMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVLIDTAGRLHIDETLMDELKQMKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +F+ ++GITG ILTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 VAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +A F
Sbjct: 272 KFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRTATFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+Q V ++G + ++ M+PG KI ++ EK + +EA+I +MT EE+ P
Sbjct: 332 EDFLEQLGQVRKLGPLDEILKMLPGANKIKGLNNLQIDEKQISRVEAIIRSMTKEEKMHP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
E++ S R+KR+A+ SG + Q+V++L+ Q
Sbjct: 392 EIINGS--RKKRIAKGSGTSVQEVNRLLKQF 420
>gi|114567018|ref|YP_754172.1| signal recognition particle protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114337953|gb|ABI68801.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 448
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/400 (51%), Positives = 283/400 (70%), Gaps = 4/400 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ V ++A+G +++ + P QQ++K+V DE+ LMGG
Sbjct: 32 MREVRLALLEADVNFKVVKDFVERVRQRAIGQEVLQSLTPGQQIIKVVHDEMTALMGGSE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L A P++ +L GLQG GKTT AKL L +QG+ +LVAGD+YRPAAI QL +L
Sbjct: 92 SKLTLAAKPPSIYMLVGLQGAGKTTTVAKLGRNLLRQGRRPVLVAGDIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQVG+PV++ G + P IA+ LE A+ +N D+VI+DTAGRL I++ +MDELK +K
Sbjct: 152 GEQVGIPVFSMG-QSNPVDIARASLEYARSQNRDIVILDTAGRLHINEELMDELKQIKSA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+LLVVDAMTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALSVK V+G PIK
Sbjct: 211 INPHEILLVVDAMTGQDAVNVAESFNRDLGLTGVILTKLDGDTRGGAALSVKAVTGCPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++ LE F+PDRMA RILGMGD+LS VEKAQ + QE A EM++KI F
Sbjct: 271 YVGMGEKLDALETFFPDRMASRILGMGDILSLVEKAQANIDQEKAREMERKIRKQEFTLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q + V MG + ++GMIPG+GK E E+ + +EA+I++MT +ER
Sbjct: 331 DFLEQMQQVRSMGPLDELLGMIPGIGKQMKGFKGEFDEREILRIEAIIKSMTLQERRDTS 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ S R+KR+A+ SG Q+V++L+ Q + R MK
Sbjct: 391 IINGS--RKKRIARGSGTKVQEVNRLLKQFEESRKLMKQF 428
>gi|389856624|ref|YP_006358867.1| signal recognition particle protein [Streptococcus suis ST1]
gi|353740342|gb|AER21349.1| signal recognition particle protein [Streptococcus suis ST1]
Length = 524
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/406 (48%), Positives = 285/406 (70%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E S
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAIGHEVIDTLNPAQQIIKIVDEELTAVLGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++AGLQG GKTT + KLAN LK++ + +L+A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMAGLQGAGKTTFTGKLANKLKQEENARPLLIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G +V +I +QGLE+AK + D V++DTAGRLQID+A+M EL+++K
Sbjct: 153 GQQIDVPVFELGNQVPALEIVRQGLEQAKANHNDYVLIDTAGRLQIDQALMAELREIKEF 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ ITG ILTK+DGD+RGGAALSV+ ++G+PIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNDQLAITGVILTKIDGDTRGGAALSVRHITGQPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASKEYDEKKSLELTEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF+ Q V MG M ++ MIPGM G A ++ E+ + A++ +MTP ERE P+
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANLKVDEREIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--TPSRRRRIANGSGNSFVEVNKFIKDFNQAKTMMQ---GVMSG 433
>gi|401682905|ref|ZP_10814794.1| signal recognition particle protein [Streptococcus sp. AS14]
gi|422851624|ref|ZP_16898294.1| signal recognition particle protein [Streptococcus sanguinis SK150]
gi|325694512|gb|EGD36421.1| signal recognition particle protein [Streptococcus sanguinis SK150]
gi|400183587|gb|EJO17838.1| signal recognition particle protein [Streptococcus sp. AS14]
Length = 524
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 285/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|116490535|ref|YP_810079.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni PSU-1]
gi|290889938|ref|ZP_06553024.1| hypothetical protein AWRIB429_0414 [Oenococcus oeni AWRIB429]
gi|419757833|ref|ZP_14284158.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB304]
gi|419857504|ref|ZP_14380210.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB202]
gi|419858985|ref|ZP_14381642.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni DSM 20252 = AWRIB129]
gi|421184274|ref|ZP_15641698.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB318]
gi|421187982|ref|ZP_15645323.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB419]
gi|421193206|ref|ZP_15650457.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB553]
gi|421194499|ref|ZP_15651719.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB568]
gi|421197348|ref|ZP_15654525.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB576]
gi|116091260|gb|ABJ56414.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni PSU-1]
gi|290480380|gb|EFD89018.1| hypothetical protein AWRIB429_0414 [Oenococcus oeni AWRIB429]
gi|399905342|gb|EJN92785.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB304]
gi|399966655|gb|EJO01175.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB419]
gi|399967558|gb|EJO02031.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB318]
gi|399973188|gb|EJO07374.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB553]
gi|399975576|gb|EJO09627.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB576]
gi|399977917|gb|EJO11888.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB568]
gi|410497346|gb|EKP88820.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni DSM 20252 = AWRIB129]
gi|410497768|gb|EKP89237.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB202]
Length = 507
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/421 (49%), Positives = 282/421 (66%), Gaps = 10/421 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+IR ALLEADV+L R F++ V ++A+G ++ G+ P +Q+VKIV D+L +MG +
Sbjct: 32 LREIRLALLEADVNLKTARNFIKQVRDKALGAKVLEGLNPSEQVVKIVNDQLTAMMGEKA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PTVI++AGLQG GKTT AKLAN LK + + +L+A DVYRPAAI+QL
Sbjct: 92 VPLNKSSKIPTVIMMAGLQGAGKTTTVAKLANRLKDENHARPLLIAADVYRPAAIEQLKS 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV+ G P +I + GL++A++ D V +DTAGRLQID+ +M ELKD+++
Sbjct: 152 LGDQLSIPVFDEGVGENPRKIVEDGLKQARENKNDYVFIDTAGRLQIDQVLMQELKDIEK 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ A FN +GITG +LTKLDGD+RGGAALS++EV+GKPI
Sbjct: 212 MAEPDEILLTVDAMTGQNATETARGFNDALGITGVVLTKLDGDTRGGAALSIREVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++ DL+ FYPDRMA RILGMGDVLS +EK Q+ ++ A E +K+ FDF
Sbjct: 272 KFVGEGEKVTDLDVFYPDRMASRILGMGDVLSLIEKTQKDFDEKQASEQLQKLQENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL+Q + + MG M ++ MIPGM P AQ + K MEA++ +MTP ER
Sbjct: 332 NDFLEQLKQIQNMGPMEDMLKMIPGMAN-NPAMAQAQIGPKDFSHMEAIVYSMTPGERVD 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDA 417
PELL +P RR+R+A SG+ V++L+ Q QMR M G LPA +ED
Sbjct: 391 PELL--TPARRRRIAAGSGRPVVDVNRLIKQFKQMRQMMYKFTN--GKGGLPA--GMEDM 444
Query: 418 L 418
L
Sbjct: 445 L 445
>gi|424780553|ref|ZP_18207426.1| Signal recognition particle, subunit Ffh SRP54 [Catellicoccus
marimammalium M35/04/3]
gi|422842955|gb|EKU27402.1| Signal recognition particle, subunit Ffh SRP54 [Catellicoccus
marimammalium M35/04/3]
Length = 478
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/411 (49%), Positives = 288/411 (70%), Gaps = 8/411 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALL+ADVS VV+ F + VSE+AVG ++ + P QQ+VKIV +EL K++G E
Sbjct: 32 MREIRMALLDADVSYKVVKDFTKTVSERAVGSEVLESLSPSQQIVKIVDEELTKVLGEET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PT+I++ GLQG GKTT + KLAN LK+ K+ +L+AGDVYRPAAIDQL
Sbjct: 92 VPLNKSPKIPTIIMMVGLQGAGKTTFAGKLANDLKQNQKARPLLIAGDVYRPAAIDQLKT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GE + VPV+ GTEV P +I +QGLE A +K D VI+DTAGRL ID+A+M ELK++K
Sbjct: 152 VGEMIDVPVFELGTEVSPVEIVRQGLELAHEKKNDYVIIDTAGRLHIDEALMTELKEIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAM+GQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAQPDEILLTVDAMSGQDAVNVAESFNEQLDITGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M +E F+PDRM+ RILGMGD+L+ ++KA + ++ A E+ +K+ + FDF
Sbjct: 272 KFVGTGEKMNAIEVFHPDRMSSRILGMGDLLTLIDKASKEFDEKKALEVTEKMRANTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPEEREKP 358
NDF++Q + MG + +I MIPGM +I E + K + AMI +MT EER+ P
Sbjct: 332 NDFIEQLDQMMNMGPLEDLIKMIPGMSQIPGMNNIEIDHKEIARKRAMILSMTEEERQNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 409
+LL +P RR+R+A+ SG +E +V++++ Q Q R +M M G++P
Sbjct: 392 DLL--NPSRRRRIARGSGNSEIEVNRMIKQFKQSR----KMMSDMTKGNMP 436
>gi|224539094|ref|ZP_03679633.1| hypothetical protein BACCELL_03995 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519284|gb|EEF88389.1| hypothetical protein BACCELL_03995 [Bacteroides cellulosilyticus
DSM 14838]
Length = 439
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/402 (49%), Positives = 278/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKTFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ + +P VIL++GLQG GKTT S KLA LK K+ K +LVA DVYRPAAI+QL +
Sbjct: 91 AEIDL-EGKPAVILMSGLQGSGKTTFSGKLARMLKTKKNKKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+GVP+Y+ P +IA+ ++EAK K DVVIVDTAGRL +D+ MM+E+ +K+
Sbjct: 150 LAEQIGVPIYSEPDSKNPVKIAENAIQEAKAKGYDVVIVDTAGRLAVDEEMMNEIAAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RM+ RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPSRMSDRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP ER P
Sbjct: 330 NDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAERSNPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
LL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 389 LLNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|340346556|ref|ZP_08669679.1| signal recognition particle protein [Prevotella dentalis DSM 3688]
gi|433651816|ref|YP_007278195.1| signal recognition particle protein [Prevotella dentalis DSM 3688]
gi|339611486|gb|EGQ16311.1| signal recognition particle protein [Prevotella dentalis DSM 3688]
gi|433302349|gb|AGB28165.1| signal recognition particle protein [Prevotella dentalis DSM 3688]
Length = 454
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 280/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DELVKLMGGE
Sbjct: 31 LKDVRRALLDADVNFKVAKTFTDTVKQKALGMNVLTAVKPGQLMVKIVHDELVKLMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+EL RP V+L++GLQG GKTT S KLAN LK KQ K +LVA DVYRPAAI+QL +
Sbjct: 91 AELNLT-GRPAVVLMSGLQGSGKTTFSGKLANMLKSKQNKKPLLVACDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ Q+ VPVY+ + ++IA ++EAK K DVVI+DTAGRL +D+ MM+E+ +K
Sbjct: 150 VAAQLDVPVYSEDGNKQVNEIALHAIQEAKAKGNDVVIIDTAGRLAVDEEMMNEIASLKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAALS++ V KPI
Sbjct: 210 TVHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVILTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+M+ ++ F+PDRMA RILGMGDV+S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFIGTGEKMDAIDVFHPDRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK V + + K +EA+I +MTP+ER PE
Sbjct: 330 NDFLGQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFKGIEAIIRSMTPKERVNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L +S RR R+A+ SG + Q+V++L+ Q Q R MK + G
Sbjct: 389 ILNQS--RRLRIAKGSGTSIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|332880672|ref|ZP_08448345.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|357045958|ref|ZP_09107588.1| signal recognition particle protein [Paraprevotella clara YIT
11840]
gi|332681306|gb|EGJ54230.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|355530964|gb|EHH00367.1| signal recognition particle protein [Paraprevotella clara YIT
11840]
Length = 450
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 276/402 (68%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G ++ V+P Q +VKIV DEL LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKTFTDTVKQKALGQNVLTAVKPSQLMVKIVHDELATLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+EL + P+VIL+AGL G GKTT+S KLA LK K+ K+ +L A D+YRPAAI+QL +
Sbjct: 91 AELNL-QGHPSVILMAGLNGAGKTTLSGKLALMLKTKKRKNPLLAACDIYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+G+PVY+ QIA+ ++EAK K DVVIVDTAGRL +D+ MM E+ +K
Sbjct: 150 LGEQIGIPVYSEPDNKDAVQIAQNAVKEAKAKGYDVVIVDTAGRLAVDEQMMQEIAAIKH 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 GINPDETLFVVDAMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME ++ F+P RMA RILGMGD++S VEKAQE +E+A +QKKI FDF
Sbjct: 270 KFVGTGEKMEAIDQFHPSRMADRILGMGDIVSLVEKAQEQYDEEEARRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF+ Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP ER PE
Sbjct: 330 NDFMSQIQQIKKMGNLKDLASMIPGVGKAL-KDVEIDDNAFKGIEAIIQSMTPRERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 389 ILNTS--RRQRIAKGSGTNIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|343525152|ref|ZP_08762108.1| signal recognition particle protein [Streptococcus constellatus
subsp. pharyngis SK1060 = CCUG 46377]
gi|343397024|gb|EGV09560.1| signal recognition particle protein [Streptococcus constellatus
subsp. pharyngis SK1060 = CCUG 46377]
Length = 524
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/409 (49%), Positives = 287/409 (70%), Gaps = 13/409 (3%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRMALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEAARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFSLGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEERE 356
DF+ Q V MG M ++ MIPGM PA +V E E + K A++ +MTP ERE
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSMTPAERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 390 NPNLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSVMQ---GVMSG 433
>gi|340352886|ref|ZP_08675720.1| signal recognition particle protein [Prevotella pallens ATCC
700821]
gi|339612202|gb|EGQ17015.1| signal recognition particle protein [Prevotella pallens ATCC
700821]
Length = 450
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/415 (49%), Positives = 284/415 (68%), Gaps = 5/415 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DELVKLMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKSFTDTVKQKALGMNVLTAVKPGQLMVKIVHDELVKLMGGES 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L +++P +IL++GLQG GKTT S KLAN LK K+ K +LVA DVYRPAAI QL +
Sbjct: 91 VGLKL-ENKPAIILMSGLQGSGKTTFSGKLANLLKTKEHKKPLLVACDVYRPAAIQQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GE V VPVY+ + IA+ ++EAK DVVI+DTAGRL +D MMDE++ +K+
Sbjct: 150 VGESVDVPVYSEPDSKNVNAIAENAIKEAKSNGNDVVIIDTAGRLAVDAEMMDEIESLKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 HVNPDEVLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+M+ L+ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFIGTGEKMDALDVFHPARMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFYNQIQQIKKMGNLKDLAAMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G + + N+
Sbjct: 389 ILNNS--RRQRIAKGSGTNIQEVNRLIKQFEQTRKMMKMVTGSKMAGMMGKMKNM 441
>gi|387786156|ref|YP_006251252.1| signal recognition particle protein subunit Ffh [Streptococcus
mutans LJ23]
gi|449908233|ref|ZP_21793580.1| signal recognition particle protein [Streptococcus mutans OMZ175]
gi|379132557|dbj|BAL69309.1| signal recognition particle protein subunit Ffh [Streptococcus
mutans LJ23]
gi|449263047|gb|EMC60481.1| signal recognition particle protein [Streptococcus mutans OMZ175]
Length = 516
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/406 (48%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM + A V+ E + A++ +MTPEERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMANNSALANVKVNEDEIARKRAIVSSMTPEERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 393 LL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|414597552|ref|ZP_11447116.1| Signal recognition particle protein [Leuconostoc citreum LBAE E16]
gi|421877939|ref|ZP_16309469.1| Signal recognition particle protein [Leuconostoc citreum LBAE C10]
gi|421878934|ref|ZP_16310410.1| Signal recognition particle protein [Leuconostoc citreum LBAE C11]
gi|372556275|emb|CCF25589.1| Signal recognition particle protein [Leuconostoc citreum LBAE C10]
gi|390447237|emb|CCF26530.1| Signal recognition particle protein [Leuconostoc citreum LBAE C11]
gi|390481673|emb|CCF29177.1| Signal recognition particle protein [Leuconostoc citreum LBAE E16]
Length = 491
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/417 (50%), Positives = 278/417 (66%), Gaps = 13/417 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ V++FV V E+A G ++ G+ P QQ+VKIV DEL MG E
Sbjct: 32 MREIRLALLEADVNYETVKKFVANVREKASGADILEGLNPAQQVVKIVNDELTATMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L + PTVI++AGLQG GKTT AKLA LK +Q +L+A DVYRPAAIDQL I
Sbjct: 92 VPLNKSPKIPTVIMMAGLQGAGKTTTVAKLAYKLKNEQHARPLLIAADVYRPAAIDQLEI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG +G+PV+ GT++ P I +QGL EA K D V +DTAGRLQID+ +M ELKD+
Sbjct: 152 LGRDLGIPVFQLGTDINPRDIVRQGLAEAHKNKNDYVFIDTAGRLQIDETLMQELKDIAD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAALS+++V+GKPI
Sbjct: 212 IASPDEILLTVDAMTGQNAAETAKGFSAALDLTGVVLTKLDGDTRGGAALSIRDVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E + +K+ FDF
Sbjct: 272 KFIGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEAQAKQLEKMRQNTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q + V +MG M ++ MIPGM P A V K +EA++ +MTP ERE
Sbjct: 332 NDFVAQLKQVQKMGPMEDLLKMIPGMAN-NPALANVNIDAKQFSHLEAIVSSMTPAEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGV--MEGGS 407
P+L+ +P RR+R+A +G+ +V++++ Q QMR M N G+ M GGS
Sbjct: 391 PDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMNQATNGNFGGLDKMMGGS 445
>gi|449899617|ref|ZP_21791113.1| signal recognition particle protein [Streptococcus mutans R221]
gi|449258112|gb|EMC55708.1| signal recognition particle protein [Streptococcus mutans R221]
Length = 516
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/407 (48%), Positives = 284/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MGSM ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGSMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|322373056|ref|ZP_08047592.1| signal recognition particle protein [Streptococcus sp. C150]
gi|321278098|gb|EFX55167.1| signal recognition particle protein [Streptococcus sp. C150]
Length = 520
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 282/407 (69%), Gaps = 7/407 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + QQ++KIV +EL ++G E S
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDASQQIIKIVNEELTDILGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I K GLE+A+ D V++DTAGRLQID+ +M EL D+K
Sbjct: 153 GQQINVPVFDMGTETPAVEIVKNGLEQARANKNDYVLIDTAGRLQIDETLMQELHDIKNF 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 AHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVME 404
+LL +P RR+R+A SG T +V++ + Q + M+++M G ME
Sbjct: 392 DLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQSVMSGDME 436
>gi|149019283|ref|ZP_01834645.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|418103002|ref|ZP_12740076.1| signal recognition particle protein [Streptococcus pneumoniae
NP070]
gi|419475661|ref|ZP_14015501.1| signal recognition particle protein [Streptococcus pneumoniae
GA14688]
gi|419486818|ref|ZP_14026582.1| signal recognition particle protein [Streptococcus pneumoniae
GA44128]
gi|421209124|ref|ZP_15666138.1| signal recognition particle protein [Streptococcus pneumoniae
2070005]
gi|421225165|ref|ZP_15681904.1| signal recognition particle protein [Streptococcus pneumoniae
2070768]
gi|421240816|ref|ZP_15697361.1| signal recognition particle protein [Streptococcus pneumoniae
2080913]
gi|147931153|gb|EDK82132.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|353775635|gb|EHD56115.1| signal recognition particle protein [Streptococcus pneumoniae
NP070]
gi|379561206|gb|EHZ26227.1| signal recognition particle protein [Streptococcus pneumoniae
GA14688]
gi|379586527|gb|EHZ51378.1| signal recognition particle protein [Streptococcus pneumoniae
GA44128]
gi|395573833|gb|EJG34419.1| signal recognition particle protein [Streptococcus pneumoniae
2070005]
gi|395589217|gb|EJG49536.1| signal recognition particle protein [Streptococcus pneumoniae
2070768]
gi|395607194|gb|EJG67291.1| signal recognition particle protein [Streptococcus pneumoniae
2080913]
Length = 523
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YR AAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRLAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|303237098|ref|ZP_07323668.1| signal recognition particle protein [Prevotella disiens FB035-09AN]
gi|302482485|gb|EFL45510.1| signal recognition particle protein [Prevotella disiens FB035-09AN]
Length = 447
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/415 (48%), Positives = 285/415 (68%), Gaps = 5/415 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKSFTDTVKQKALGMNVLTAVKPGQLMVKIVHDELAELMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L +++P +IL++GLQG GKTT + KLAN LK K+ K +LVA DVYRPAAI+QL +
Sbjct: 91 VGLTL-ENKPAIILMSGLQGSGKTTFTGKLANLLKTKEHKKPLLVACDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GE VGVPVY+ + IA+ + EAK DVVI+DTAGRL +D MM+E++ +K
Sbjct: 150 VGESVGVPVYSEPESKDVNAIAEHAIREAKANGNDVVIIDTAGRLAVDTEMMNEIESLKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 HVNPDEVLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME L+ F+P+RMA RILGMGDV+S VE+AQE +E+A+++QKKI FDF
Sbjct: 270 KFIGTGEKMEALDVFHPNRMADRILGMGDVVSLVERAQEQFDEEEAKKLQKKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFYNQIQQIKKMGNLKDLAAMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+L S R++R+A+ SG Q+V++LV Q Q R MK + G G + + N+
Sbjct: 389 VLNNS--RKQRIAKGSGTNIQEVNRLVKQFDQTRKMMKMVTGSKMAGMMGKMKNM 441
>gi|386586085|ref|YP_006082487.1| signal recognition particle protein [Streptococcus suis D12]
gi|353738231|gb|AER19239.1| signal recognition particle protein [Streptococcus suis D12]
Length = 524
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/406 (48%), Positives = 285/406 (70%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E S
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAIGHEVIDTLNPAQQIIKIVDEELTAVLGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++AGLQG GKTT + KLAN LK++ + +L+A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMAGLQGAGKTTFTGKLANKLKQEENARPLLIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G +V +I +QGLE+AK + D V++DTAGRLQID+A+M EL+++K
Sbjct: 153 GQQIDVPVFELGNQVPALEIVRQGLEQAKANHNDYVLIDTAGRLQIDQALMAELREIKEF 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ ITG ILTK+DGD+RGGAALSV+ ++G+PIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNDQLAITGVILTKIDGDTRGGAALSVRHITGQPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASKEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF+ Q V MG M ++ MIPGM G A ++ E+ + A++ +MTP ERE P+
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANLKVDEREIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--TPSRRRRIANGSGNSFVEVNKFIKDFNQAKTMMQ---GVMSG 433
>gi|386337727|ref|YP_006033896.1| signal recognition particle, subunit SRP54/Ffh [Streptococcus
gallolyticus subsp. gallolyticus ATCC 43143]
gi|334280363|dbj|BAK27937.1| signal recognition particle, subunit SRP54/Ffh [Streptococcus
gallolyticus subsp. gallolyticus ATCC 43143]
Length = 521
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 284/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL +++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDPTQQIVKIVNEELTEILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
EL + PT+I++ GLQGVGKTT + KLAN L K + +++A D+YRPAAIDQL L
Sbjct: 93 ELEKSPKIPTIIMMVGLQGVGKTTFAGKLANKLIKDENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GSQINVPVFDMGTDHSAVEIVTNGLAQAKENHNDYVIIDTAGRLQIDEKLMEELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA + EK++ A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|24379497|ref|NP_721452.1| signal recognition particle protein [Streptococcus mutans UA159]
gi|449864523|ref|ZP_21778423.1| signal recognition particle protein [Streptococcus mutans U2B]
gi|449870470|ref|ZP_21780642.1| signal recognition particle protein [Streptococcus mutans 8ID3]
gi|449984811|ref|ZP_21819282.1| signal recognition particle protein [Streptococcus mutans NFSM2]
gi|450081930|ref|ZP_21852033.1| signal recognition particle protein [Streptococcus mutans N66]
gi|26007034|sp|Q54431.3|SRP54_STRMU RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|24377436|gb|AAN58758.1|AE014944_8 signal recognition particle protein subunit, Ffh [Streptococcus
mutans UA159]
gi|449156378|gb|EMB59847.1| signal recognition particle protein [Streptococcus mutans 8ID3]
gi|449179745|gb|EMB81936.1| signal recognition particle protein [Streptococcus mutans NFSM2]
gi|449214694|gb|EMC14933.1| signal recognition particle protein [Streptococcus mutans N66]
gi|449264947|gb|EMC62280.1| signal recognition particle protein [Streptococcus mutans U2B]
Length = 516
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/407 (48%), Positives = 284/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MGSM ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGSMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|450002251|ref|ZP_21825979.1| signal recognition particle protein [Streptococcus mutans N29]
gi|449183368|gb|EMB85352.1| signal recognition particle protein [Streptococcus mutans N29]
Length = 516
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/408 (48%), Positives = 284/408 (69%), Gaps = 9/408 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQIKVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEDEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
+LL +P RR+R+A SG T V++ + Q + K + GVM GG
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSGG 434
>gi|421190065|ref|ZP_15647369.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB422]
gi|421192045|ref|ZP_15649314.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB548]
gi|399969992|gb|EJO04298.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB548]
gi|399970865|gb|EJO05155.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB422]
Length = 507
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/421 (49%), Positives = 282/421 (66%), Gaps = 10/421 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+IR ALLEADV+L R F++ V ++A+G ++ G+ P +Q+VKIV D+L +MG +
Sbjct: 32 LREIRLALLEADVNLKTARNFIKQVRDKALGAKVLEGLNPSEQVVKIVNDQLTAMMGEKA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PTVI++AGLQG GKTT AKLAN LK + + +L+A DVYRPAAI+QL
Sbjct: 92 VPLNKSSKIPTVIMMAGLQGAGKTTTVAKLANRLKDENHARPLLIAADVYRPAAIEQLKS 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV+ G P +I + GL++A++ D V +DTAGRLQID+ +M ELKD+++
Sbjct: 152 LGDQLSIPVFDEGVGENPRKIVEDGLKQARENKNDYVFIDTAGRLQIDQVLMQELKDIEK 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ A FN +GITG +LTKLDGD+RGGAALS++EV+GKPI
Sbjct: 212 MAEPDEILLTVDAMTGQNATETARGFNDALGITGVVLTKLDGDTRGGAALSIREVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++ DL+ FYPDRMA RILGMGDVLS +EK Q+ ++ A E +K+ FDF
Sbjct: 272 KFVGEGEKVTDLDVFYPDRMASRILGMGDVLSLIEKTQKDFDEKQASEQLQKLQENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL+Q + + MG M ++ MIPGM P AQ + K MEA++ +MTP ER
Sbjct: 332 NDFLEQLKQIQNMGPMEDMLKMIPGMAN-NPAMAQAQIGPKDFSHMEAIVYSMTPGERVD 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDA 417
PELL +P RR+R+A SG+ V++L+ Q QMR M G LPA +ED
Sbjct: 391 PELL--TPARRRRIAAGSGRPVVDVNRLIKQFKQMRQMMYKFTN--GKGGLPA--GMEDM 444
Query: 418 L 418
L
Sbjct: 445 L 445
>gi|421452536|ref|ZP_15901897.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
salivarius K12]
gi|400182967|gb|EJO17229.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
salivarius K12]
Length = 520
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 280/407 (68%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + QQ++KIV +EL ++G E S
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDASQQIIKIVNEELTDILGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I K GLE+A+ D V++DTAGRLQID+ +M EL D+K
Sbjct: 153 GQQINVPVFDMGTETPAVEIVKNGLEQARANKNDYVLIDTAGRLQIDETLMQELHDIKNF 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 AHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|419707043|ref|ZP_14234549.1| Signal recognition particle protein [Streptococcus salivarius PS4]
gi|383283283|gb|EIC81241.1| Signal recognition particle protein [Streptococcus salivarius PS4]
Length = 520
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 282/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + QQ++KIV +EL +++G E S
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDASQQIIKIVNEELTEILGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I K GLE+A+ D V++DTAGRLQID+ +M EL+D+K
Sbjct: 153 GQQINVPVFDMGTETPALEIVKNGLEQARANKNDYVLIDTAGRLQIDETLMQELRDIKDF 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 AHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|329770523|ref|ZP_08261901.1| signal recognition particle protein [Gemella sanguinis M325]
gi|328836272|gb|EGF85941.1| signal recognition particle protein [Gemella sanguinis M325]
Length = 450
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/409 (50%), Positives = 291/409 (71%), Gaps = 7/409 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ +SE+AVG +++ + P QQ+VKIV +ELV+L+GG
Sbjct: 32 MREVRLALLEADVNFKVVKEFVKKISERAVGTEVMKSLTPAQQIVKIVNEELVELLGGTN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLA-NYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
EL + T +++ GLQG GKTT + KLA K K +L+A DVYRPAA+ QL
Sbjct: 92 VELN-QGGKITTVMMVGLQGAGKTTTAGKLALKAKKTMKKKPLLIAADVYRPAAVQQLKT 150
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ + V+ + P+ I K+GLE AK+ + VI+DTAGRL ID+ +MDELKD+K
Sbjct: 151 LGKQLDIEVFFVDKD--PADIVKEGLEFAKENYYNYVIIDTAGRLHIDELLMDELKDIKS 208
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP E+LLVVDAM GQEA + T+F+ ++ ITG +LTKLDGD+RGGAALS+K ++GKPI
Sbjct: 209 VSNPDEILLVVDAMIGQEAVNIATSFDEQLDITGLVLTKLDGDTRGGAALSIKSITGKPI 268
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
KLVG GE+M DLE F+P+RMA RILGMGDVL+ +EKAQ + +++A++MQ+KI++ +F F
Sbjct: 269 KLVGMGEKMNDLELFHPERMASRILGMGDVLTLIEKAQASIDEDEAKKMQEKILTQSFTF 328
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIEAMTPEEREKP 358
DFL Q V ++GS+ ++GMIPGMGK+ + EK +EA+I++MT EER+ P
Sbjct: 329 EDFLSQLEQVKKLGSIKDILGMIPGMGKMKNMNLDAVDEKQFVYIEAIIKSMTIEERQNP 388
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 407
+++ + RRKR+AQ SG+ +V +L+ Q +MR MK G+M S
Sbjct: 389 DII--NVPRRKRIAQGSGRPISEVHKLIKQFEEMRKMMKQFGGLMNDKS 435
>gi|23098986|ref|NP_692452.1| signal recognition particle protein [Oceanobacillus iheyensis
HTE831]
gi|22777214|dbj|BAC13487.1| signal recognition particle [Oceanobacillus iheyensis HTE831]
Length = 448
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/402 (48%), Positives = 290/402 (72%), Gaps = 8/402 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
R++R ALLEADV+ VV++ + + E+A+G ++ + P QQ++K+V++EL +LMGGE S
Sbjct: 33 REVRLALLEADVNFKVVKQLITKIKERAIGQEVMESLTPGQQVIKVVKEELTQLMGGEQS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
++ A PTVI++ GLQG GKTT + KLAN+L KK ++ +LVA DVYRPAAI QL L
Sbjct: 93 KIAVADRSPTVIMMVGLQGAGKTTTTGKLANHLRKKHNRNPLLVACDVYRPAAIKQLETL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ +PV++ GTE P IA Q +E AK+++ D VI+DTAGRL +D+ +MDEL+ +K
Sbjct: 153 GTQLDMPVFSMGTEANPVDIAHQAIEHAKEEHRDYVIIDTAGRLHVDENLMDELQSIKND 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+ LVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS+K V+ KPIK
Sbjct: 213 VKPDEIFLVVDSMTGQDAVNVAESFNEQLDITGVVLTKLDGDTRGGAALSIKSVTDKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++ LE F+P+RMA RILGMGDVLS +EKAQ + ++ A+E+++K+ + +F F+
Sbjct: 273 FAGMGEKLDQLEAFHPERMASRILGMGDVLSLIEKAQTNVDEKQAKELEEKMRTMSFTFD 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGK---ITPAQVREAEKSLKIMEAMIEAMTPEEREK 357
DFL+Q V +MG + ++ MIPG GK + AQ EK L +EA+I++MT +ER++
Sbjct: 333 DFLEQMGQVKQMGPLDELMDMIPGAGKMKGLKNAQFD--EKQLGQVEAIIQSMTKKERQE 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
P ++ S RRKR+A+ SG + QV++L+ Q +M+ MK +
Sbjct: 391 PSIINGS--RRKRIAKGSGTSVAQVNRLLKQFNEMKKMMKQM 430
>gi|220931573|ref|YP_002508481.1| signal recognition particle protein [Halothermothrix orenii H 168]
gi|219992883|gb|ACL69486.1| signal recognition particle protein [Halothermothrix orenii H 168]
Length = 444
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/407 (51%), Positives = 293/407 (71%), Gaps = 5/407 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++ ALLEADV+ VV++F++ V E+AVG ++ + P QQ++KIV DEL +LMGG
Sbjct: 32 LKEVKLALLEADVNYKVVKQFIKRVQERAVGHEVMESLTPGQQVIKIVNDELTELMGGNK 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L + PT+I+L GLQG GKTT +AKLA +LKK+GK +LVAGD+YRPAAI QL +L
Sbjct: 92 SDLSISSKPPTIIMLVGLQGAGKTTSAAKLARFLKKKGKKPLLVAGDIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+++ +PV++ G + P I+K G+ +A+ DVVI+DTAGRL ID+ MMDELK +K
Sbjct: 152 GDRLDIPVFSMGDKNSPVDISKAGISKAESNGNDVVIIDTAGRLHIDEEMMDELKSIKSN 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + F+ +GI G ILTKLDGD+RGGAALS+K V+GKPIK
Sbjct: 212 VRPHEILLVVDAMTGQDAVNVAENFSESLGIDGIILTKLDGDARGGAALSIKAVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++ LE F+PDRM+ RILGMGDVLS +EKA+ + + AEE++KKI F
Sbjct: 272 FVGMGEKLDALESFHPDRMSSRILGMGDVLSLIEKAEASIDAKKAEELEKKIRQNEFSLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q + V MG + +++GMIPG+ G++ QV EK L +EA+I +MT EER+ PE
Sbjct: 332 DFLEQLQQVRNMGPLDQILGMIPGVSGQLKNLQV--DEKQLDRIEAIINSMTIEERKNPE 389
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
++ S RR+R+A+ SG Q V++L+ Q Q + MK L G+ + G
Sbjct: 390 IINGS--RRRRIARGSGTKIQDVNRLLKQFKQTKKMMKQLNGMQKSG 434
>gi|422878857|ref|ZP_16925323.1| signal recognition particle protein [Streptococcus sanguinis
SK1059]
gi|422928706|ref|ZP_16961648.1| signal recognition particle protein [Streptococcus sanguinis ATCC
29667]
gi|422931680|ref|ZP_16964611.1| signal recognition particle protein [Streptococcus sanguinis SK340]
gi|332366910|gb|EGJ44651.1| signal recognition particle protein [Streptococcus sanguinis
SK1059]
gi|339616120|gb|EGQ20775.1| signal recognition particle protein [Streptococcus sanguinis ATCC
29667]
gi|339619980|gb|EGQ24555.1| signal recognition particle protein [Streptococcus sanguinis SK340]
Length = 534
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 285/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 43 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 102
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 103 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 162
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 163 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 222
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 223 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGIILTKIDGDTRGGAALSVRQITGKPIK 282
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 283 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 342
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 343 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 401
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 402 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 443
>gi|374323436|ref|YP_005076565.1| signal recognition (srp) component [Paenibacillus terrae HPL-003]
gi|357202445|gb|AET60342.1| signal recognition (srp) component [Paenibacillus terrae HPL-003]
Length = 458
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/418 (47%), Positives = 287/418 (68%), Gaps = 5/418 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F+ V E++VG ++ P ++ IV EL +LMGG
Sbjct: 32 MREVRLALLEADVNFKVVKDFIAKVKEKSVGKEVMDSFTPGMVIIDIVNKELTELMGGSQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L A PTVI++ GLQG GKTT S KLA L+KQ +LVAGD+YRPAAI QL +L
Sbjct: 92 AKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKLLQKQNHRPLLVAGDIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ PV+T G + P +IAKQGL+ AK D VI+DTAGRL +D+ +M+EL+ +
Sbjct: 152 GEQINAPVFTLGDQTSPVEIAKQGLQHAKDNGNDYVIIDTAGRLHVDEELMEELRQIHAN 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP EVLLVVD+MTGQ+A + FN + +TG +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 VNPDEVLLVVDSMTGQDAVNVAEHFNTSLELTGVVLTKLDGDTRGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ +EPF+P+RMA RILGMGD+LS +EKAQ + + A+EM++K+ +A F F
Sbjct: 272 FATLGEKLDAMEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEMERKMRNAEFTFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V ++G + +++ MIPGMG + + V+ +K + +EA++ +MT +E++ P+
Sbjct: 332 DFLEQMDQVKKLGPIDQILDMIPGMGNMKQMKDVKVDDKQMGRIEAIVHSMTTQEKQNPD 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALSNLE 415
++ S RRKR+A SG + +V++L+ Q +MR MK +M +GG AL L+
Sbjct: 392 MINHS--RRKRIAVGSGTSLAEVNRLIKQFDEMRRMMKQFSDMMGPKGGKNKALKQLK 447
>gi|418107712|ref|ZP_12744750.1| signal recognition particle protein [Streptococcus pneumoniae
GA41410]
gi|418176100|ref|ZP_12812694.1| signal recognition particle protein [Streptococcus pneumoniae
GA41437]
gi|353779895|gb|EHD60359.1| signal recognition particle protein [Streptococcus pneumoniae
GA41410]
gi|353841539|gb|EHE21594.1| signal recognition particle protein [Streptococcus pneumoniae
GA41437]
Length = 487
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/402 (49%), Positives = 283/402 (70%), Gaps = 9/402 (2%)
Query: 7 ALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFA 66
ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +E++ +
Sbjct: 2 ALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKS 61
Query: 67 KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVG 125
PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL LG+Q+
Sbjct: 62 PKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTLGQQID 121
Query: 126 VPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTE 185
VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK + P E
Sbjct: 122 VPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKTLAQPNE 181
Query: 186 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 245
+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK G G
Sbjct: 182 ILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTG 241
Query: 246 ERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQ 305
E++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFNDF+ Q
Sbjct: 242 EKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQ 301
Query: 306 TRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKPELLAE 363
V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P+LL
Sbjct: 302 LDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENPDLL-- 358
Query: 364 SPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 359 NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 397
>gi|418164597|ref|ZP_12801267.1| signal recognition particle protein [Streptococcus pneumoniae
GA17371]
gi|353829458|gb|EHE09589.1| signal recognition particle protein [Streptococcus pneumoniae
GA17371]
Length = 487
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/402 (49%), Positives = 283/402 (70%), Gaps = 9/402 (2%)
Query: 7 ALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFA 66
ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +E++ +
Sbjct: 2 ALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKS 61
Query: 67 KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVG 125
PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL LG+Q+
Sbjct: 62 PKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTLGQQID 121
Query: 126 VPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTE 185
VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK + P E
Sbjct: 122 VPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNE 181
Query: 186 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 245
+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK G G
Sbjct: 182 ILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTG 241
Query: 246 ERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQ 305
E++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFNDF+ Q
Sbjct: 242 EKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQ 301
Query: 306 TRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKPELLAE 363
V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P+LL
Sbjct: 302 LDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENPDLL-- 358
Query: 364 SPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 359 NPNRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 397
>gi|228476757|ref|ZP_04061423.1| signal recognition particle protein [Streptococcus salivarius
SK126]
gi|340398712|ref|YP_004727737.1| signal recognition particle subunit FFH/SRP54 (Srp54)
[Streptococcus salivarius CCHSS3]
gi|387761204|ref|YP_006068181.1| signal recognition particle protein [Streptococcus salivarius 57.I]
gi|228251628|gb|EEK10729.1| signal recognition particle protein [Streptococcus salivarius
SK126]
gi|338742705|emb|CCB93210.1| signal recognition particle subunit FFH/SRP54 (Srp54)
[Streptococcus salivarius CCHSS3]
gi|339291971|gb|AEJ53318.1| signal recognition particle protein [Streptococcus salivarius 57.I]
Length = 520
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 281/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + QQ++KIV +EL +++G E S
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDASQQIIKIVNEELTEILGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I K GLE+A+ D V++DTAGRLQID+ +M EL D+K
Sbjct: 153 GQQINVPVFDMGTETPAVEIVKNGLEQARANKNDYVLIDTAGRLQIDETLMQELHDIKDF 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 AHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|163814209|ref|ZP_02205601.1| hypothetical protein COPEUT_00363 [Coprococcus eutactus ATCC 27759]
gi|158450658|gb|EDP27653.1| signal recognition particle protein [Coprococcus eutactus ATCC
27759]
Length = 448
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/409 (49%), Positives = 283/409 (69%), Gaps = 10/409 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++++RALLEADV+ VV+ FV++VS++AVG +++G+ P ++KIV++E+ KLMG E+
Sbjct: 32 MKEVKRALLEADVNFKVVKSFVKSVSDRAVGEEVLKGLNPGHMVIKIVKEEMDKLMGSEM 91
Query: 61 SELVFAKSRP----TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQ 116
+E+ K RP T+I++ GLQG GKTT +AKLA K +GK +LVA DVYRPAAI Q
Sbjct: 92 TEI---KLRPSNEITIIMMCGLQGAGKTTTAAKLAYQFKNKGKKPLLVACDVYRPAAIKQ 148
Query: 117 LVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD 176
L + GE+VGVPV+ G KP IAK ++ A K N+++V +DTAGRL +D+ MMDEL +
Sbjct: 149 LQVNGEKVGVPVFAMGDNNKPLDIAKAAIQHAAKNNINLVFLDTAGRLHVDEDMMDELAE 208
Query: 177 VKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSG 236
+K L+ +L VD+MTGQ+A + TTFN +IGI G ILTKLDGD+RGGAALS+K V+G
Sbjct: 209 IKANLDIAYTILTVDSMTGQDAVNVATTFNDKIGIDGVILTKLDGDTRGGAALSIKAVTG 268
Query: 237 KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN 296
KPI G GE++ DLEPFYPDRMA RILGMGDV S +EKAQ + +E A+EM++K A+
Sbjct: 269 KPILYSGMGEKLTDLEPFYPDRMASRILGMGDVESLIEKAQSAIDEEKAKEMEQKFRKAS 328
Query: 297 FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEERE 356
FDFNDFL Q + +MG M ++ M+PGM V E + K +A++ +MTP ER
Sbjct: 329 FDFNDFLDQMAQLEQMGGMQEILSMMPGMAS-QMKNVEIDENAAKTPKAIVLSMTPRERS 387
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+ + SP R+KR+A +G V++ + Q Q + MK + G+M G
Sbjct: 388 LQDPI--SPSRKKRIADGAGVQIADVNRFLKQFEQSKKMMKQMSGMMGG 434
>gi|450063749|ref|ZP_21845104.1| signal recognition particle protein [Streptococcus mutans NLML5]
gi|449204410|gb|EMC05207.1| signal recognition particle protein [Streptococcus mutans NLML5]
Length = 516
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/407 (48%), Positives = 284/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++AGLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMAGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|379705243|ref|YP_005203702.1| signal recognition particle protein [Streptococcus infantarius
subsp. infantarius CJ18]
gi|374681942|gb|AEZ62231.1| signal recognition particle protein [Streptococcus infantarius
subsp. infantarius CJ18]
Length = 519
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL +++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDPTQQIVKIVNEELTEILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
EL + PT+I++ GLQG GKTT + KLAN L K++ M++A D+YRPAAIDQL L
Sbjct: 93 ELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+A+M EL+DVK +
Sbjct: 153 GSQINVPVFDMGTDHSAVEIVTNGLAQAKENHNDYVIIDTAGRLQIDEALMQELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 AKPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKRSMELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M +I MIPGM PA + EK++ A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDLIKMIPGMAN-NPALKNFKVDEKAVARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG + V++ + Q + M+ GVM G
Sbjct: 392 DLL--TPSRRRRIAAGSGNSFVDVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|374337948|ref|YP_005094657.1| Signal recognition particle subunit Ffh SRP54 [Streptococcus
macedonicus ACA-DC 198]
gi|372284057|emb|CCF02297.1| Signal recognition particle, subunit Ffh SRP54 [Streptococcus
macedonicus ACA-DC 198]
Length = 521
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL +++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDPTQQIVKIVNEELTEILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
EL + PT+I++ GLQG GKTT + KLAN L K + +++A D+YRPAAIDQL L
Sbjct: 93 ELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKDENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GSQINVPVFDMGTDHSAVEIVTNGLAQAKENHNDYVIIDTAGRLQIDEKLMEELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVADEFNKQLDVTGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA + EK++ A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
ELL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 392 ELL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|423070367|ref|ZP_17059143.1| signal recognition particle protein [Streptococcus intermedius
F0413]
gi|355365728|gb|EHG13448.1| signal recognition particle protein [Streptococcus intermedius
F0413]
Length = 524
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/409 (49%), Positives = 287/409 (70%), Gaps = 13/409 (3%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRMALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEAARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFSLGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNNQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEERE 356
DF+ Q V MG M ++ MIPGM PA +V E E + K A++ +MTP ERE
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSMTPAERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 390 NPNLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSVMQ---GVMSG 433
>gi|218130040|ref|ZP_03458844.1| hypothetical protein BACEGG_01625 [Bacteroides eggerthii DSM 20697]
gi|317476534|ref|ZP_07935781.1| signal recognition particle protein [Bacteroides eggerthii
1_2_48FAA]
gi|217987760|gb|EEC54087.1| signal recognition particle protein [Bacteroides eggerthii DSM
20697]
gi|316907277|gb|EFV28984.1| signal recognition particle protein [Bacteroides eggerthii
1_2_48FAA]
Length = 440
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/412 (48%), Positives = 280/412 (67%), Gaps = 5/412 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKNFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ S+P VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 AEINI-DSKPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y+ P IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+ +K
Sbjct: 150 LAEQIEVPMYSEPDSKNPVAIAQNAIQEAKAKGYDLVIVDTAGRLAVDEEMMNEIAAIKA 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPNEILFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEER P
Sbjct: 330 NDFLNQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEERSNPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P L
Sbjct: 389 ILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMPKL 438
>gi|297617092|ref|YP_003702251.1| signal recognition particle protein [Syntrophothermus lipocalidus
DSM 12680]
gi|297144929|gb|ADI01686.1| signal recognition particle protein [Syntrophothermus lipocalidus
DSM 12680]
Length = 447
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/393 (51%), Positives = 274/393 (69%), Gaps = 7/393 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+AVG +++ + P QQ+VKIV +EL +LMGG+
Sbjct: 32 MREVRLALLEADVNYKVVKDFVARVKERAVGQEVLKSLTPGQQVVKIVYEELTQLMGGDQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L A PTV+++ GLQG GKTT AKLA L QG+ +LVA D+YRPAAI QL +L
Sbjct: 92 TKLNLAAKPPTVVMMVGLQGTGKTTTCAKLARSLLAQGRRPLLVAADIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE+ PV++ G E P IA+ LE A+ D+VI+DTAGRL I++ +M+ELKD+K
Sbjct: 152 GEKCNCPVFSMGQE-NPVNIARAALEYARSNGRDIVILDTAGRLHINEELMNELKDLKSS 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
LNP E+LLVVDAMTGQ+A + ++FN ++G+TG +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 211 LNPHEILLVVDAMTGQDAVNVASSFNEQLGLTGVVLTKLDGDTRGGAALSVKAVAGCPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++EDLEPFYP+RMA RILGMGDV S VEKAQ + ++ A E+ KKI F
Sbjct: 271 FAGVGEKLEDLEPFYPNRMASRILGMGDVQSLVEKAQASIDEKKARELGKKIRQQEFTLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA----EKSLKIMEAMIEAMTPEERE 356
DFL Q + V MG + ++ MIPG G + + + EK + +EA+I++MTPEER
Sbjct: 331 DFLDQIQQVRSMGPLEDLLAMIPGFGNLKQLKGFKTADIDEKEISRIEAIIKSMTPEERL 390
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
P +L S R+KR+A+ SG Q V++L+
Sbjct: 391 NPTMLNSS--RKKRIAKGSGTRVQDVNRLLKHF 421
>gi|421186068|ref|ZP_15643463.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB418]
gi|399967712|gb|EJO02178.1| signal recognition particle subunit FFH/SRP54 (srp54) [Oenococcus
oeni AWRIB418]
Length = 507
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/421 (49%), Positives = 282/421 (66%), Gaps = 10/421 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+IR ALLEADV+L R F++ V ++A+G ++ G+ P +Q+VKIV D+L +MG +
Sbjct: 32 LREIRLALLEADVNLKTARNFIKQVRDKALGAKVLEGLNPSEQVVKIVNDQLTAMMGEKA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PTVI++AGLQG GKTT AKLAN LK + + +L+A DVYRPAAI+QL
Sbjct: 92 VPLNKSSKIPTVIMMAGLQGAGKTTTVAKLANRLKDENHARPLLIAADVYRPAAIEQLKS 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV+ G P +I + GL++A++ D V +DTAGRLQID+ +M ELKD+++
Sbjct: 152 LGDQLSIPVFDEGVGENPRKIIEDGLKQARENKNDYVFIDTAGRLQIDQVLMQELKDIEK 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ A FN +GITG +LTKLDGD+RGGAALS++EV+GKPI
Sbjct: 212 MAEPDEILLTVDAMTGQNATETARGFNDALGITGVVLTKLDGDTRGGAALSIREVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++ DL+ FYPDRMA RILGMGDVLS +EK Q+ ++ A E +K+ FDF
Sbjct: 272 KFVGEGEKVTDLDVFYPDRMASRILGMGDVLSLIEKTQKDFDEKQASEQLQKLQENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL+Q + + MG M ++ MIPGM P AQ + K MEA++ +MTP ER
Sbjct: 332 NDFLEQLKQIQNMGPMEDMLKMIPGMAN-NPAMAQAQIGPKDFSHMEAIVYSMTPGERVD 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDA 417
PELL +P RR+R+A SG+ V++L+ Q QMR M G LPA +ED
Sbjct: 391 PELL--TPARRRRIAAGSGRPVVDVNRLIKQFKQMRQMMYKFTN--GKGGLPA--GMEDM 444
Query: 418 L 418
L
Sbjct: 445 L 445
>gi|319646021|ref|ZP_08000251.1| signal recognition particle protein [Bacillus sp. BT1B_CT2]
gi|317391771|gb|EFV72568.1| signal recognition particle protein [Bacillus sp. BT1B_CT2]
Length = 451
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/407 (49%), Positives = 300/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQDVMKSLTPGQQVIKVVKEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT + KLAN L KK ++ +LVA D+YRPAAI QL
Sbjct: 92 SKIAAAKRPPTVIMMVGLQGAGKTTSTGKLANLLRKKHNRNPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+ + D V++DTAGRL ID+ +MDEL+ VK
Sbjct: 152 LGKQLDMPVFSLGDKVSPVEIAKQAIEKAKEDHHDYVLIDTAGRLHIDEELMDELEQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
P E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 TAQPEEIFLVVDSMTGQDAVNVAKSFNEQLGVTGVILTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQANVDEEKAKELEQKMKNMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + +I M+PG GK+ V+ EK L +EA+I++MT +E+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLEDLIQMMPGAGKMKGLKNVKVDEKQLSHIEAIIKSMTGKEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
E++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 EIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMTKG 436
>gi|417686764|ref|ZP_12336040.1| signal recognition particle protein [Streptococcus pneumoniae
GA41301]
gi|419523741|ref|ZP_14063318.1| signal recognition particle protein [Streptococcus pneumoniae
GA13723]
gi|332074900|gb|EGI85372.1| signal recognition particle protein [Streptococcus pneumoniae
GA41301]
gi|379556916|gb|EHZ21964.1| signal recognition particle protein [Streptococcus pneumoniae
GA13723]
Length = 487
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/402 (49%), Positives = 283/402 (70%), Gaps = 9/402 (2%)
Query: 7 ALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFA 66
ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +E++ +
Sbjct: 2 ALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKS 61
Query: 67 KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVG 125
PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL LG+Q+
Sbjct: 62 PKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTLGQQID 121
Query: 126 VPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTE 185
VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK + P E
Sbjct: 122 VPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNE 181
Query: 186 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 245
+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK G G
Sbjct: 182 ILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTG 241
Query: 246 ERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQ 305
E++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFNDF+ Q
Sbjct: 242 EKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQ 301
Query: 306 TRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKPELLAE 363
V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P+LL
Sbjct: 302 LDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENPDLL-- 358
Query: 364 SPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 359 NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 397
>gi|164688563|ref|ZP_02212591.1| hypothetical protein CLOBAR_02208 [Clostridium bartlettii DSM
16795]
gi|164602976|gb|EDQ96441.1| signal recognition particle protein [Clostridium bartlettii DSM
16795]
Length = 450
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/417 (49%), Positives = 286/417 (68%), Gaps = 8/417 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ FV+ V E+ VG ++ + P Q ++KIV +EL LMG
Sbjct: 32 MREVKLALLEADVNFKVVKDFVKKVQERCVGQEVMESLTPAQHVIKIVNEELTALMGDVQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ + PT+I++ GLQG GKTT S KL Y KKQGK +LVA DVYRPAAI QL ++
Sbjct: 92 SKITISSKPPTIIMMVGLQGAGKTTTSGKLGGYFKKQGKKPLLVACDVYRPAAIKQLEVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+ + + V+ G + P IAK GL A K N D+VI+DTAGRL ID+ +MDELK +K
Sbjct: 152 GKSLDIEVFNMGDKENPVNIAKAGLSHAIKNNNDLVIIDTAGRLHIDEELMDELKSIKSE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + +F+ +GI G +LTKLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VRPHEILLVVDSMTGQDAVNVAESFDNALGIDGVVLTKLDGDTRGGAALSIRAVTQKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+++DLEPF+PDRMA RILGMGDVLS +EKAQE M E A+ + K+ FDF
Sbjct: 272 FIGMGEKLDDLEPFHPDRMASRILGMGDVLSLIEKAQETMDMEKAKALGAKLKKQEFDFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL Q + +MGSM +++GMIPGMG I V K + ++A+I++MT EER P
Sbjct: 332 DFLDQMEQIQKMGSMDKILGMIPGMGDIKNQLGDVDMNGKEMNRIKAIIQSMTVEERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK----NLMGVMEGGSLPAL 411
++L S R++R+A+ SG + Q+V++L+ QL +M+ MK N G+ + G P L
Sbjct: 392 QILNAS--RKRRIAKGSGTSVQEVNKLIKQLNEMKKMMKMFTSNSKGMKKRGGFPGL 446
>gi|408492133|ref|YP_006868502.1| signal recognition particle, subunit SRP54 Ffh [Psychroflexus
torquis ATCC 700755]
gi|408469408|gb|AFU69752.1| signal recognition particle, subunit SRP54 Ffh [Psychroflexus
torquis ATCC 700755]
Length = 442
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/390 (50%), Positives = 276/390 (70%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRAL++ADV+ + + F V E+A+G +++ ++P+Q +VKIV+DEL KLMGG+
Sbjct: 31 LKEVRRALVDADVNFKIAKDFTNLVKEKALGQDVLKTLKPNQLMVKIVKDELTKLMGGDA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
E+ + P+VIL++GLQG GKTT S KLANYLK K+ K +LVA DVYRPAAIDQL +
Sbjct: 91 EEVDLS-GNPSVILMSGLQGSGKTTFSGKLANYLKSKKSKQPLLVACDVYRPAAIDQLHV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+GV V++ E P IA+ + AK+ +VVI+DTAGRL +D+ MM+E+ D+ +
Sbjct: 150 VGDQIGVEVFSNKEEKNPVLIAEAAIAHAKQNGHNVVILDTAGRLAVDQVMMNEISDIYK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVDAMTGQ+A TFN + G ILTKLDGD+RGGAA+S+K V KPI
Sbjct: 210 AVKPQETLFVVDAMTGQDAVNTAKTFNDVLDFDGVILTKLDGDTRGGAAISIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +++A ++QKKI F F
Sbjct: 270 KFIGTGEKMDAIDVFYPSRMADRILGMGDVVSLVERAQEQYDEDEARKIQKKIAKDKFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFLKQ + V +MGSM ++GMIPG GK+ + + + K +EAMI +MTP ERE P
Sbjct: 330 DDFLKQIQQVKKMGSMKDLMGMIPGAGKMMK-NMDIDDDAFKHIEAMIHSMTPHERENPT 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
+ S R+KR+ + SG + Q+V+QL+ Q
Sbjct: 389 SINAS--RKKRIGKGSGTSVQEVNQLLKQF 416
>gi|380696278|ref|ZP_09861137.1| signal recognition particle protein [Bacteroides faecis MAJ27]
Length = 440
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/398 (50%), Positives = 275/398 (69%), Gaps = 5/398 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKTFTDTVKEKAIGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
E+ +SRP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 VEINL-ESRPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y+ P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+ +K
Sbjct: 150 LAEQIEVPMYSELDSKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEITAIKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPDEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP ER PE
Sbjct: 330 NDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAERSNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
LL S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 389 LLNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|422346384|ref|ZP_16427298.1| signal recognition particle protein [Clostridium perfringens
WAL-14572]
gi|373225929|gb|EHP48256.1| signal recognition particle protein [Clostridium perfringens
WAL-14572]
Length = 452
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/388 (47%), Positives = 286/388 (73%), Gaps = 2/388 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV++F+ V ++ VG ++ + P QQ++KIV DEL LMG
Sbjct: 32 MREVKLALLEADVNFKVVKKFISNVKDKCVGEEVLNSLTPGQQVIKIVNDELTTLMGETE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L ++ + PTV +L GLQG GKTT++ KLA +L+K+ K +LVA D+YRPAAI QL ++
Sbjct: 92 SKLKYSDNGPTVFMLVGLQGAGKTTMAGKLALHLRKKNKKPLLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV++ G +VK IAK +E AK +VVI+DTAGRL ID+ +M ELKDVK V
Sbjct: 152 GKQIDIPVFSMGDKVKAVDIAKAAIEHAKDNGNNVVIIDTAGRLHIDEDLMQELKDVKEV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP+E+LLVVDAMTGQ+A + TFN + ++G ILTKLDGD+RGGAALS+++++ KPIK
Sbjct: 212 SNPSEILLVVDAMTGQDAVNVAETFNNSLDLSGIILTKLDGDTRGGAALSIRDITSKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M D+E F+PDRMA RILGMGDVLS +EKAQ+ + Q++A ++ +K+++ F+F+
Sbjct: 272 FVGVGEKMSDIEVFHPDRMASRILGMGDVLSLIEKAQQAIDQDEASKLSEKMLNQEFNFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
D+L + ++G ++++I MIPG+ ++ + EK + ++A+I++MT +ER++P
Sbjct: 332 DYLSAMDQMKKLGPINKLIEMIPGVNTKELEGIDFSQGEKQMATVKAIIQSMTAKERKQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLV 386
L+ + R++R+A+ SG T Q+V++++
Sbjct: 392 SLVIGNGSRKRRIAKGSGTTVQEVNKVL 419
>gi|320546729|ref|ZP_08041040.1| signal recognition particle protein [Streptococcus equinus ATCC
9812]
gi|320448608|gb|EFW89340.1| signal recognition particle protein [Streptococcus equinus ATCC
9812]
Length = 521
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 284/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL +++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDPTQQIVKIVNEELTEILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
EL + PT+I++ GLQG GKTT + KLAN L K+ K+ M++A D+YRPAAIDQL L
Sbjct: 93 ELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEEKARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+A+M EL+DVK +
Sbjct: 153 GSQINVPVFDMGTDHSAVEIVTHGLAQAKENHNDYVIIDTAGRLQIDEALMQELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 AKPNEILLVVDSMIGQEAANVADEFNKQLDITGIVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKRSMELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM PA + EK++ A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG + V++ + Q + M+ GVM G
Sbjct: 392 DLL--TPSRRRRIAAGSGNSFVDVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|312130725|ref|YP_003998065.1| signal recognition particle subunit ffh/srp54 (srp54)
[Leadbetterella byssophila DSM 17132]
gi|311907271|gb|ADQ17712.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Leadbetterella byssophila DSM 17132]
Length = 438
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/406 (49%), Positives = 278/406 (68%), Gaps = 4/406 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++IRRAL++ADV+ V + V ++A+ ++ V P Q VKIV++EL LMGG+
Sbjct: 31 VKEIRRALMDADVNYKVAKEVTDKVKQEAIDRKVMIAVEPGQLFVKIVQEELTALMGGK- 89
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+E V K P V+L+AGLQG GKTT S K ANYLKKQGK MLVA DVYRPAAI QL +L
Sbjct: 90 AETVNLKGSPAVVLIAGLQGSGKTTFSGKFANYLKKQGKQVMLVAADVYRPAAITQLQVL 149
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+GV VY IA+ + EAK K +VIVDTAGRL +D+ MM E++++K+
Sbjct: 150 GEQIGVDVYAEPENKDAVNIARNAVAEAKSKGKSIVIVDTAGRLAVDEVMMTEVENIKKA 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P+E+L VVD+MTGQ+A FN + G +LTKLDGDSRGGAALS++ V KP+K
Sbjct: 210 ISPSEILFVVDSMTGQDAVNTAKAFNDRLDFDGVVLTKLDGDSRGGAALSIRAVVDKPVK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+ GE+MEDL+ F+PDRMA RILGMGDV+S VE+AQ+ +++A ++ KK+ NFD N
Sbjct: 270 FMSTGEKMEDLDIFHPDRMASRILGMGDVISLVERAQQAFDEDEARKLNKKMRENNFDLN 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + +MG++ V+GMIPGMG V + S K +E++I++MTP+ER +P++
Sbjct: 330 DFLGQLEQIKKMGNLKDVMGMIPGMGAAIK-DVDISNDSFKPIESIIKSMTPKERSQPDI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
+ S RRKR+A +G++ Q+V+ L+ Q QM+ MK + GG
Sbjct: 389 IDGS--RRKRIATGAGRSIQEVNNLLKQFEQMKKMMKKFNAMTPGG 432
>gi|171779410|ref|ZP_02920374.1| hypothetical protein STRINF_01255 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282027|gb|EDT47458.1| signal recognition particle protein [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
Length = 519
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL +++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDPTQQIVKIVNEELTEILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
EL + PT+I++ GLQG GKTT + KLAN L K++ M++A D+YRPAAIDQL L
Sbjct: 93 ELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+A+M EL+DVK +
Sbjct: 153 GSQINVPVFDMGTDHSAVEIVTNGLAQAKENHNDYVIIDTAGRLQIDEALMQELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 AKPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKRSMELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M +I MIPGM PA + EK++ A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDLIKMIPGMAN-NPALKNFKVDEKAVARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG + V++ + Q + M+ GVM G
Sbjct: 392 DLL--TPSRRRRIAAGSGNSFVDVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|422882278|ref|ZP_16928734.1| signal recognition particle protein [Streptococcus sanguinis SK355]
gi|332360439|gb|EGJ38250.1| signal recognition particle protein [Streptococcus sanguinis SK355]
Length = 524
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 285/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGL++AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLDQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|449931990|ref|ZP_21802581.1| signal recognition particle protein [Streptococcus mutans 3SN1]
gi|449161857|gb|EMB65027.1| signal recognition particle protein [Streptococcus mutans 3SN1]
Length = 516
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/407 (48%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQIKVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+KQ V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIKQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEDEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|402574098|ref|YP_006623441.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfosporosinus meridiei DSM 13257]
gi|402255295|gb|AFQ45570.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfosporosinus meridiei DSM 13257]
Length = 452
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/399 (50%), Positives = 280/399 (70%), Gaps = 4/399 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV V E+++G ++ + P Q ++K+V +E++ LMGG
Sbjct: 31 MREVRVALLEADVNFKVVKDFVAKVKERSIGQEVLESLSPAQHVIKVVHEEMIDLMGGAS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+++ A PTVI+L GLQG GKTT +AKLAN LKKQGK +LVA D+YRPAAI QL +L
Sbjct: 91 GKILIASKPPTVIMLVGLQGAGKTTHAAKLANMLKKQGKHPLLVACDIYRPAAIKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV++ G E P IAK + A + DVVI+DTAGRL I++ +M EL+D+K
Sbjct: 151 GAQLNVPVFSMGEE-NPRDIAKASITHANQNGQDVVIIDTAGRLHINEELMGELRDIKGS 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +F+ ++G+ G ILTKLDGD+RGGAALS+K V+G IK
Sbjct: 210 VKPHEILLVVDAMTGQDAVNVAESFHGDLGLDGVILTKLDGDTRGGAALSIKAVTGCTIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+M+ LE F+PDRMA RILGMGDVL+ +EKAQE ++ A+EM++K+ F +
Sbjct: 270 FIGLGEKMDALEAFHPDRMASRILGMGDVLTLIEKAQESFDEKKAKEMEQKLRKQEFTLD 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG +S ++ MIPG+GK V EK +EA+I +MT EER KP +
Sbjct: 330 DFLDQMQQMKKMGPLSSILEMIPGVGK-QLKDVNIDEKDTAHIEAIIRSMTTEERRKPAI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ +S R+KR+A+ SG + Q V +L+ Q QM+ MK
Sbjct: 389 IKDS--RKKRIAKGSGTSVQDVGRLLKQFEQMQKMMKQF 425
>gi|315639588|ref|ZP_07894728.1| signal recognition particle protein [Enterococcus italicus DSM
15952]
gi|315484549|gb|EFU75005.1| signal recognition particle protein [Enterococcus italicus DSM
15952]
Length = 472
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 283/401 (70%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+L VV+ F + V E+AVG ++ + P QQ+VKIV +EL +G E
Sbjct: 32 MREIRLALLEADVNLQVVKEFTKNVRERAVGAEVLDSLSPAQQIVKIVNEELTTTLGSET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
+ + PT+I++ GLQG GKTT + KLAN LKK + +++AGDVYRPAAIDQL +
Sbjct: 92 VGIEKSPKIPTIIMMVGLQGAGKTTFAGKLANRLKKTENARPLMIAGDVYRPAAIDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GT V P +I +QGL A +K D V++DTAGRL +D+A+M+ELK +K
Sbjct: 152 LGQQLDVPVFDMGTTVSPVEIVRQGLAVAAEKKNDYVLIDTAGRLHVDEALMEELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ+A + +FN ++GITG ++TKLDGD+RGGAALS++ V+G PI
Sbjct: 212 LAQPNEILLVVDAMTGQDAVTVADSFNQQLGITGVVITKLDGDTRGGAALSIRSVTGAPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE++ DLE F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEE+ KK+ +FDF
Sbjct: 272 KFTGTGEKLTDLEIFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELAKKMKENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPEEREKP 358
NDF++Q V MG + ++ MIPGM ++ + + K + +A++ +MTPEERE P
Sbjct: 332 NDFIEQLDQVMSMGPLEDLMKMIPGMSQVPGMDNFKVDPKDIARKKAIVFSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+LL +P RR+R+A SG +V++++ Q + R M+ +
Sbjct: 392 DLL--NPSRRRRIAAGSGNNVVEVNRMIKQFKEARTMMQKM 430
>gi|313205775|ref|YP_004044952.1| signal recognition particle subunit ffh/srp54 (srp54) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|383485092|ref|YP_005394004.1| signal recognition particle subunit ffh/srp54 (srp54) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|386322241|ref|YP_006018403.1| hypothetical protein RIA_2012 [Riemerella anatipestifer RA-GD]
gi|407452570|ref|YP_006724295.1| Signal recognition particle GTPase [Riemerella anatipestifer
RA-CH-1]
gi|416111226|ref|ZP_11592483.1| signal recognition particle protein [Riemerella anatipestifer
RA-YM]
gi|442315048|ref|YP_007356351.1| Signal recognition particle GTPase [Riemerella anatipestifer
RA-CH-2]
gi|312445091|gb|ADQ81446.1| signal recognition particle subunit FFH/SRP54 (srp54) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|315022827|gb|EFT35851.1| signal recognition particle protein [Riemerella anatipestifer
RA-YM]
gi|325336784|gb|ADZ13058.1| Ffh [Riemerella anatipestifer RA-GD]
gi|380459777|gb|AFD55461.1| signal recognition particle subunit ffh/srp54 (srp54) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|403313554|gb|AFR36395.1| Signal recognition particle GTPase [Riemerella anatipestifer
RA-CH-1]
gi|441483971|gb|AGC40657.1| Signal recognition particle GTPase [Riemerella anatipestifer
RA-CH-2]
Length = 454
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/390 (51%), Positives = 273/390 (70%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++IRRAL++ADV+ V + + V E+A+G ++ + P Q + KIV DELV+LMGG
Sbjct: 31 VKEIRRALVDADVNYKVAKDLTKRVQEKALGQNVLTSLTPGQLMTKIVHDELVELMGGS- 89
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVI 119
E + +PTVIL+AGLQG GKTT S KLANYLKK+ K+ +LVA DVYRPAAIDQL +
Sbjct: 90 QEGINLSGKPTVILIAGLQGSGKTTFSGKLANYLKKKRAKNPLLVACDVYRPAAIDQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG Q G+PVYT PS IA+ + AK DVVIVDTAGRL ID+ MM+E+K V
Sbjct: 150 LGSQTGIPVYTEEENKNPSTIAENAVNFAKANKHDVVIVDTAGRLAIDEQMMNEIKSVHY 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ PTE L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL+++ V KPI
Sbjct: 210 FIKPTETLFVVDSMTGQDAVNTAKAFNDALNFDGVVLTKLDGDTRGGAALTIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+ME L+ FYP+RMA RILGMGDV+S VE+AQE +E+A+++QKKI F F
Sbjct: 270 KFISTGEKMEALDLFYPERMADRILGMGDVVSLVERAQEQFDEEEAKKLQKKIAKNEFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFLKQ + + +MG+M ++GM+PG+GK V + S K +EA+I +MTPEER +P
Sbjct: 330 DDFLKQIQQIKKMGNMKDLLGMLPGVGKAIK-DVDIDDNSFKHIEAIIHSMTPEERRRPS 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
++ + R+KR+A+ SG+ ++V+QL+ Q
Sbjct: 389 IIDVN--RKKRIAKGSGRKLEEVNQLMKQF 416
>gi|410476692|ref|YP_006743451.1| signal recognition particle protein [Streptococcus pneumoniae
gamPNI0373]
gi|406369637|gb|AFS43327.1| signal recognition particle protein [Streptococcus pneumoniae
gamPNI0373]
Length = 487
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/402 (49%), Positives = 282/402 (70%), Gaps = 9/402 (2%)
Query: 7 ALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFA 66
ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +E++ +
Sbjct: 2 ALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKS 61
Query: 67 KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVG 125
PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL LG+Q+
Sbjct: 62 PKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTLGQQID 121
Query: 126 VPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTE 185
VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK + P E
Sbjct: 122 VPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNE 181
Query: 186 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 245
+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK G G
Sbjct: 182 ILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTG 241
Query: 246 ERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQ 305
E++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFNDF+ Q
Sbjct: 242 EKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQ 301
Query: 306 TRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKPELLAE 363
V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P LL
Sbjct: 302 LDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENPNLL-- 358
Query: 364 SPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 359 NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 397
>gi|218132452|ref|ZP_03461256.1| hypothetical protein BACPEC_00311 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992562|gb|EEC58564.1| signal recognition particle protein [[Bacteroides] pectinophilus
ATCC 43243]
Length = 452
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/410 (48%), Positives = 288/410 (70%), Gaps = 8/410 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ ALLEADV+ VV++FV++V E+A+G ++ + P Q ++KIV +E++KLMG E
Sbjct: 32 LREVKMALLEADVNFKVVKQFVKSVEERAIGQDVMESLTPGQMVIKIVNEEMIKLMGSET 91
Query: 61 SELVF-AKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ + S TVI++AGLQG GKTT +AKLA K QG+ +LVA DVYRPAA++QL I
Sbjct: 92 TEIALKSGSEITVIMMAGLQGAGKTTTTAKLAGKFKAQGRKPLLVACDVYRPAAVEQLKI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
GE+ GVPV+ GT P IAK G+E AK ++VI+DTAGRL +D+ MM EL+++K
Sbjct: 152 NGEKQGVPVFAMGTNQNPVDIAKAGIEHAKSNGNNIVILDTAGRLHVDEDMMTELQNIKS 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ + +LVVD+MTGQ+A + ++F+ +IGI G ILTKLDGD+RGGAALS+K V+GKPI
Sbjct: 212 SVGVDQTILVVDSMTGQDAVNVASSFDEKIGIDGVILTKLDGDTRGGAALSIKAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
G GE++ DLE F+PDRMA RILGMGDVLS +EKA+ + + A EM+KK+ A FDF
Sbjct: 272 LYAGMGEKLSDLEQFHPDRMASRILGMGDVLSLIEKAEAQIDADKAAEMEKKLRKAEFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMG-----KITPAQVREAEKSLKIMEAMIEAMTPEE 354
ND+L+ + MG + ++ M+PGMG K + EAEK+LK EA+I +M E
Sbjct: 332 NDYLEYMGQIKNMGGLGSIMNMLPGMGFAGKIKTDGVDMDEAEKNLKRTEAIILSMNNAE 391
Query: 355 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 404
R +P++L +P R+ R+A+ +G +V+++V Q QM+ MK + G+M+
Sbjct: 392 RSRPDIL--NPSRKNRIARGAGVDISEVNRVVKQFEQMKKMMKQMPGMMK 439
>gi|52080200|ref|YP_078991.1| signal recognition particle-like (SRP) component [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|404489088|ref|YP_006713194.1| signal recognition particle protein [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|423682141|ref|ZP_17656980.1| signal recognition particle-like (SRP) component [Bacillus
licheniformis WX-02]
gi|52003411|gb|AAU23353.1| signal recognition particle-like (SRP) component [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52348079|gb|AAU40713.1| signal recognition particle protein Ffh [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|383438915|gb|EID46690.1| signal recognition particle-like (SRP) component [Bacillus
licheniformis WX-02]
Length = 446
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/407 (49%), Positives = 301/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQDVMKSLTPGQQVIKVVKEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT + KLAN L KK ++ +LVA D+YRPAAI QL
Sbjct: 92 SKIAAAKRPPTVIMMVGLQGAGKTTSTGKLANLLRKKHNRNPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+ + D V++DTAGRL ID+ +MDEL+ VK
Sbjct: 152 LGKQLDMPVFSLGDKVSPVEIAKQAIEKAKEDHHDYVLIDTAGRLHIDEELMDELEQVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
P E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 TAQPEEIFLVVDSMTGQDAVNVAKSFNEQLGVTGVILTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQANVDEEKAKELEQKMKNMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + +I M+PG GK+ + V+ EK L +EA+I++MT +E+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLEDLIQMMPGAGKMKGLKNVKVDEKQLSHIEAIIKSMTGKEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
E++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 EIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMTKG 436
>gi|336395268|ref|ZP_08576667.1| signal recognition particle protein [Lactobacillus farciminis KCTC
3681]
Length = 478
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/417 (47%), Positives = 289/417 (69%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ V E+A+G ++ + P QQ++KIV +EL KLMG E
Sbjct: 32 MREVRMALLEADVNFDVVKTFVKTVRERALGAEVMESLTPSQQVIKIVDEELTKLMGQEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PT+I++ GLQG GKTT + KLAN LK K+ +AGDVYRPAAI+QL
Sbjct: 92 VPLNKAPHIPTIIMMVGLQGAGKTTTAGKLANRLKTNDKARPFFIAGDVYRPAAIEQLKT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPVY GT+ P +I K GL AK+ D VI+DTAGRL+ID+ +M+EL+ +K
Sbjct: 152 IGQQLDVPVYDEGTDHDPVEIVKNGLAVAKENKNDYVIIDTAGRLEIDEQLMEELQKIKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+L V D+MTGQ AA + F+ ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAHPNEILFVADSMTGQVAAKVAHGFDEQLDITGVVLTKLDGDTRGGAALSIRSVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+++ L+ F+PDRMA RILGMGD+L+ +EKAQ +E A+++ +KI +FDF
Sbjct: 272 KFIGQGEKLDQLDVFHPDRMANRILGMGDMLTLIEKAQTDYNEEQAKQVAEKIRENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q + +MG + ++ MIPGM P A + EK + ++A++ +MTP+ERE
Sbjct: 332 NDFIDQMDQIQKMGPLDELMKMIPGMAN-NPALANINIGEKDIAHLKAIVYSMTPKERED 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+LL +P RR+R+A SG++ Q V++++ Q Q R ++M M G++ + L
Sbjct: 391 PDLL--NPSRRRRIAAGSGQSVQNVNRMIKQFKQSR----DMMNKMSKGNMAGMEQL 441
>gi|315924205|ref|ZP_07920431.1| signal recognition particle protein [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315622607|gb|EFV02562.1| signal recognition particle protein [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 449
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/399 (50%), Positives = 282/399 (70%), Gaps = 5/399 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
R+I+ ALLEADV+ VV+RF +AVSE+A G +++ + P QQ +K+V DE+ +L+GGE+
Sbjct: 34 REIKLALLEADVNFKVVKRFTKAVSERAQGEEILKSLTPGQQYIKVVNDEMTRLLGGEIK 93
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGK-SCMLVAGDVYRPAAIDQLVIL 120
L KS + ++ GLQG GKTT + K+AN L+K+ K +LVA DVYRPAAIDQL +L
Sbjct: 94 PLELQKSDLNIFMMVGLQGAGKTTTAGKIANLLRKENKLKPLLVACDVYRPAAIDQLKVL 153
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ +PVYT +P IA Q + A+K+ ++VI+DTAGRLQID+ +M EL D+K +
Sbjct: 154 GEQLDIPVYTMPGMKEPRIIANQAISYAQKQGYNLVILDTAGRLQIDERLMRELMDIKEL 213
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++PTE LLVVD MTGQE+ + +F+ ++ I+G +LTKLDGD+RGGAALSV +GKPI
Sbjct: 214 VHPTETLLVVDGMTGQESVNVAKSFDDQLDISGVVLTKLDGDTRGGAALSVTYTTGKPIV 273
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ DLE F+PDRMA RILGMGDVLS ++KAQE++ +E A M++KI A FD +
Sbjct: 274 FIGSGEKLSDLERFHPDRMASRILGMGDVLSLIDKAQEMVDEEQARAMEEKIRKATFDLS 333
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL Q + +MGS++ ++ M+PGM K A + + E+ K EA+I AMTPEER KP
Sbjct: 334 DFLDQLHQLQKMGSLTSLLEMMPGMNKKALAGLDMVKTEQQTKRTEAIIYAMTPEERAKP 393
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
E++ S RRKR+A SG + V++L+ Q R MK
Sbjct: 394 EIINGS--RRKRIANGSGTSVADVNRLLKGFDQSRKMMK 430
>gi|329115921|ref|ZP_08244638.1| signal recognition particle protein [Streptococcus parauberis NCFD
2020]
gi|326906326|gb|EGE53240.1| signal recognition particle protein [Streptococcus parauberis NCFD
2020]
gi|456370942|gb|EMF49838.1| Signal recognition particle [Streptococcus parauberis KRS-02109]
gi|457095553|gb|EMG26037.1| Signal recognition particle [Streptococcus parauberis KRS-02083]
Length = 524
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 281/401 (70%), Gaps = 4/401 (0%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ + E+AVG +I + P QQ++KIV +EL ++G E S
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRIRERAVGHEIIDTLDPTQQILKIVNEELTAILGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+V + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIVKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ +I +GLE+A++ D V++DTAGRLQID+ +M EL+DVK +
Sbjct: 153 GQQINVPVFDMGTDHSAVEIVTKGLEQARENRNDYVLIDTAGRLQIDEKLMGELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLV+D+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++G+PIK
Sbjct: 213 AQPNEILLVIDSMIGQEAANVADEFNKQLEITGVVLTKIDGDTRGGAALSVREITGRPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + Q+ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDQQKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF+ Q V MG M ++ MIPGM G A ++ EK + A++ +MTP ERE PE
Sbjct: 333 DFIAQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDEKQIARKRAIVSSMTPTERENPE 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 400
LL +P RR+R+A SG T +V++ + Q + M+ +M
Sbjct: 393 LL--NPSRRRRIASGSGNTFVEVNKFIKDFNQAKTMMQGMM 431
>gi|347525650|ref|YP_004832398.1| signal recognition particle protein [Lactobacillus ruminis ATCC
27782]
gi|345284609|gb|AEN78462.1| signal recognition particle protein [Lactobacillus ruminis ATCC
27782]
Length = 493
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/417 (47%), Positives = 290/417 (69%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V +AVG ++ + P QQ+VKIV +EL+K+MG
Sbjct: 44 MREIRLALLEADVNFKVVKDFVKEVKNRAVGAEVLESLTPAQQIVKIVNEELIKVMGESA 103
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L +K PTVI++ GLQG GKTT + KLA LKK+ + +++A DVYRPAA+DQL
Sbjct: 104 VSLNKSKKIPTVIMMVGLQGAGKTTTAGKLAYKLKKEENARPLMIAADVYRPAAVDQLKT 163
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+ + VPV+ GT+V P +I +QG++ A+++ D VI+DTAGRLQID+ +M+EL +K
Sbjct: 164 VGKSIDVPVFELGTDVDPVEIVRQGMKLAEEQKNDYVIIDTAGRLQIDEKLMNELARIKE 223
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LL VD+MTGQ A + FN + +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 224 LTHPDEILLTVDSMTGQNAVEVAQGFNDTLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 283
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M L+ FYPDRMA RILGMGD+L+ +EKAQ+ Q+ AEE+ K+ FDF
Sbjct: 284 KFIGQGEKMTALDVFYPDRMASRILGMGDMLTLIEKAQQDFDQKKAEELADKMRENTFDF 343
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDF++Q V MG + ++ MIPGM PA V+ K ++ +A++ +MTP+ERE
Sbjct: 344 NDFIEQMEQVQNMGPIEDIMKMIPGMAN-NPALKNVKVDPKDIEHTKAIVYSMTPDERED 402
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P++L +P RR+R+A SG+ Q+V++++ Q QMR ++M M G+ + N+
Sbjct: 403 PDML--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMR----DMMQKMTNGNFGGMENM 453
>gi|225419757|ref|ZP_03762060.1| hypothetical protein CLOSTASPAR_06095 [Clostridium asparagiforme
DSM 15981]
gi|225041594|gb|EEG51840.1| hypothetical protein CLOSTASPAR_06095 [Clostridium asparagiforme
DSM 15981]
Length = 459
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/405 (50%), Positives = 289/405 (71%), Gaps = 5/405 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++ ALLEADVS VV++F+ ++ +QAVG + + Q ++KIV +ELVKLMG E
Sbjct: 32 LKEVKMALLEADVSFKVVKQFINSIQDQAVGAEVFGKLDAGQTVIKIVNEELVKLMGSET 91
Query: 61 SELVFAKSRP-TVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLV 118
+E+ TVI++ GLQG GKTT +AKLA LK K+G+ +LVA DVYRPAAI QL
Sbjct: 92 TEVDLKPGNEITVIMMTGLQGAGKTTTTAKLAAQLKAKKGRKPLLVACDVYRPAAIKQLQ 151
Query: 119 ILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVK 178
I GE+VGVPV+ G + KP IAK +E A K +++VI+DTAGRL ID+AMMDEL ++K
Sbjct: 152 INGEKVGVPVFAMGDKHKPVDIAKAAMEHAAKNGMNLVILDTAGRLHIDEAMMDELVEIK 211
Query: 179 RVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKP 238
L+ + +LVVDAMTGQ+A + TFN +IGI G +LTKLDGD+RGGAALS++ V+GKP
Sbjct: 212 DQLDVHQTILVVDAMTGQDAVNVSETFNNKIGIDGVVLTKLDGDTRGGAALSIRAVTGKP 271
Query: 239 IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 298
I VG GE++ DLE FYPDRMA RILGMGD++S +EKA + +E A EM +K+ A FD
Sbjct: 272 ILYVGMGEKLSDLEQFYPDRMASRILGMGDIMSLIEKATAEIDEEQAREMTQKLRKAEFD 331
Query: 299 FNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEEREK 357
+NDFL Q + + ++G M ++ M+PG+G +++ + E EKS+K +E++I +MT +ER
Sbjct: 332 YNDFLAQMQQIKKIGGMGSILSMLPGVGNQLSGVDMDEGEKSMKRVESIILSMTKDERAN 391
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
P L+ +P R+KR+A+ +G +V++LV Q QM+ MK + G+
Sbjct: 392 PGLI--NPSRKKRIARGAGVDISEVNRLVKQFDQMKKMMKQMPGM 434
>gi|392428759|ref|YP_006469770.1| signal recognition particle protein [Streptococcus intermedius
JTH08]
gi|419776601|ref|ZP_14302523.1| signal recognition particle protein [Streptococcus intermedius
SK54]
gi|383846012|gb|EID83412.1| signal recognition particle protein [Streptococcus intermedius
SK54]
gi|391757905|dbj|BAM23522.1| signal recognition particle protein [Streptococcus intermedius
JTH08]
Length = 524
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/409 (49%), Positives = 287/409 (70%), Gaps = 13/409 (3%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRMALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEAARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFSLGTEVPAIEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNELRDVKVL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNDQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEERE 356
DF+ Q V MG M ++ MIPGM PA +V E E + K A++ +MTP ERE
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSMTPAERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 390 NPNLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSVMQ---GVMSG 433
>gi|403386852|ref|ZP_10928909.1| signal recognition particle protein [Clostridium sp. JC122]
Length = 453
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/390 (48%), Positives = 276/390 (70%), Gaps = 2/390 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ FV+ VSE+ +G ++ + P QQ++KIV DEL KLMG
Sbjct: 32 MREVKLALLEADVNYKVVKNFVKDVSEKCLGNEVLESLTPGQQVIKIVNDELTKLMGNTE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L + +VI+L GLQG GKTT++ KLA L+K K +LVA DVYRPAAI QL ++
Sbjct: 92 SKLELNPNGISVIMLVGLQGAGKTTMAGKLALNLRKNNKKPLLVACDVYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+ + +PV+T G + P IAK +E AK + +VVI+DTAGRL ID+ +M+ELKD+K
Sbjct: 152 GKSIDIPVFTMGDKTSPVDIAKASIEHAKNEGCNVVIIDTAGRLHIDEELMNELKDIKEN 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + +FN ++ +TG ILTKLDGD+RGGAALS+K ++GKPIK
Sbjct: 212 IVPNEILLVVDSMTGQDAVNVAESFNSQLDLTGVILTKLDGDTRGGAALSIKAMTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M DLE F+P+RM+ RILGMGD+LS +EKAQ + +E A+E+ K++S F+F
Sbjct: 272 YVGMGEKMSDLEIFHPERMSSRILGMGDMLSLIEKAQAAIDEEKAQELGNKMLSQEFNFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL + ++G + +++ M+PG ++ + + EK + +E++I +MT ER KP
Sbjct: 332 DFLDMLHQMKKLGPLGKIVEMLPGANSKELKDLDLSQGEKEMSKIESIINSMTLNERRKP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQ 388
L+ SP R+KR+A +G T Q+V++L+
Sbjct: 392 SLITSSPSRKKRIANGAGTTIQEVNKLLKH 421
>gi|227510448|ref|ZP_03940497.1| signal recognition particle protein Ffh [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
gi|227190100|gb|EEI70167.1| signal recognition particle protein Ffh [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
Length = 478
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/417 (50%), Positives = 295/417 (70%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VVR FV+ V E+A G ++ G+ P QQ+VKIV +EL K MG E
Sbjct: 32 MREIRLALLEADVNFQVVRTFVKTVEERAKGAKVLEGLNPSQQIVKIVDEELTKTMGQEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L ++ PTVI+++GLQG GKTT KLA LK +Q +L+A DVYRPAAI+QL
Sbjct: 92 VPLNKSEKIPTVIMMSGLQGAGKTTTVGKLALKLKNEQNARPLLIADDVYRPAAIEQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+QV VPV+ GT+V P +IAK+GLE+AK+ + D VI+DTAGRLQID+ +MDEL ++K+
Sbjct: 152 VGQQVDVPVFQLGTDVDPVEIAKRGLEKAKEDHNDYVIIDTAGRLQIDEKLMDELSNIKK 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+LLV+DAMTGQ A A F+ + +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 AVNPDEILLVIDAMTGQNAVATAEGFDKTLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+MEDL+ F+PDRMA RILGMGD+LS +EK Q+ Q+ AEE+ +KI FDF
Sbjct: 272 KFVGQGEKMEDLDVFHPDRMASRILGMGDMLSLIEKTQKEYDQKQAEELSEKIKENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q + +MG + ++ MIPGM PA V K + ++A+I +MT +ER
Sbjct: 332 NDFLDQLDQIQKMGPLDEIMKMIPGMAN-NPALQNVNMNPKDMDHLKAIIYSMTEQERTD 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+++ +P RR+R+++ SG+ Q+V++++ Q Q MK +M + G++ + N+
Sbjct: 391 PDVM--NPSRRRRISRGSGRPIQEVNRMIKQFGQ----MKTMMNKVSKGNMSGMENM 441
>gi|409990172|ref|ZP_11273587.1| signal recognition particle protein, partial [Arthrospira platensis
str. Paraca]
gi|409938960|gb|EKN80209.1| signal recognition particle protein, partial [Arthrospira platensis
str. Paraca]
Length = 360
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/324 (59%), Positives = 244/324 (75%)
Query: 76 AGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEV 135
AGLQG GKTT SAKLA +L+K+ +S +LVA DVYRPAAIDQL+ LG+Q+ VPV+ G +
Sbjct: 1 AGLQGTGKTTASAKLALHLQKENRSSLLVATDVYRPAAIDQLMTLGKQINVPVFELGKDA 60
Query: 136 KPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTG 195
P +IA+QG+E K + +D +I+DTAGRLQID+ MM EL +K + P E LLVVDAMTG
Sbjct: 61 DPVEIARQGIEYGKAQGIDTIIIDTAGRLQIDQNMMAELAQIKETVQPHETLLVVDAMTG 120
Query: 196 QEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFY 255
QEAA L TFN IGITGAILTK+DGDSRGGAALS++ VSG PIK VG GE++E L+PFY
Sbjct: 121 QEAATLTQTFNDRIGITGAILTKMDGDSRGGAALSIRRVSGAPIKFVGVGEKVEALQPFY 180
Query: 256 PDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSM 315
P+RMA RILGMGD+L+ VEKA+E DAE+MQ+KI+ A FDF DFLKQTR + MGS+
Sbjct: 181 PERMASRILGMGDILTLVEKAEEEFDIADAEKMQEKILEAKFDFTDFLKQTRLMKNMGSL 240
Query: 316 SRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDS 375
++ +IPGM KI+ Q+ E LK EAMI +MT EER+ PELL+ SP RRKRVA+ +
Sbjct: 241 GGLVKLIPGMNKISQEQLDAGESQLKRSEAMINSMTIEERKNPELLSNSPSRRKRVAKGA 300
Query: 376 GKTEQQVSQLVAQLFQMRVRMKNL 399
G E+ V +LV+ +MR M+ +
Sbjct: 301 GYAEKDVMRLVSDFQRMRSLMQQM 324
>gi|341821055|emb|CCC57389.1| signal recognition particle protein Ffh [Weissella thailandensis
fsh4-2]
Length = 485
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/409 (50%), Positives = 278/409 (67%), Gaps = 9/409 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV++V E+A G ++ G+ P QQ+V IV DEL +MG
Sbjct: 32 MREIRLALLEADVNFKVVKDFVRSVREKAAGAKVLDGLNPAQQIVSIVNDELTAMMGESA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
EL + PTVI++ GLQG GKTT + KLA LK +Q +++A DVYRPAAIDQL
Sbjct: 92 VELNKSPKIPTVIMMVGLQGAGKTTTAGKLALKLKNEQNARPLMIAADVYRPAAIDQLKS 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+ VPV+ GT+V P I K G+E+A + D V +D AGRLQID+ +M EL DVK
Sbjct: 152 LGEQIDVPVFDMGTDVNPRDIVKAGMEKAAELKSDYVFIDAAGRLQIDEELMQELADVKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ A FN + ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IAQPDEIMLVVDAMTGQNAVETAEGFNNRLDITGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ ++ A E +K+ S FDF
Sbjct: 272 KFVGQGEKMTDLDIFYPDRMASRILGMGDLLTLIEKAQKDYDEKQANETMEKMKSNTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q + MGSM ++ MIPGM PA + K + + A++ +MTPEERE
Sbjct: 332 NDFIDQMDQLQNMGSMEDIMKMIPGMAN-NPALKNAKIDPKDMAHIRAIVMSMTPEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
P++L +P R++R+A +G+ +V+++V Q QM+ K + GVM G
Sbjct: 391 PDVL--NPSRKRRLAAGAGRPVVEVNRMVKQFNQMK---KMMSGVMNGN 434
>gi|313203704|ref|YP_004042361.1| signal recognition particle subunit ffh/srp54 (srp54) [Paludibacter
propionicigenes WB4]
gi|312443020|gb|ADQ79376.1| signal recognition particle subunit FFH/SRP54 (srp54) [Paludibacter
propionicigenes WB4]
Length = 439
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/409 (49%), Positives = 278/409 (67%), Gaps = 7/409 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ + + F V E+A+G ++ ++P+Q +VKIV DEL +LMGG
Sbjct: 31 LKDVRKALLDADVNFKIAKTFTDTVKEKAIGQNVLTSLKPNQLMVKIVHDELAQLMGGAS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
++ K PTVIL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAAI+QL +
Sbjct: 91 VDINL-KGSPTVILMSGLQGSGKTTFSGKLANLLKTKRSKNPLLVACDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+GVPVY+ P IA+ ++ AK DVVIVDTAGRL +D+AMM+E+ +K+
Sbjct: 150 LGEQLGVPVYSDLESKNPVSIAEAAIKHAKLHGNDVVIVDTAGRLAVDEAMMNEIAAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G ILTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPQEILFVVDSMTGQDAVNTAKEFNDRLDFDGVILTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ L+ FYP+RMA RILGMGD++S VE+AQE +EDA +QK+I FDF
Sbjct: 270 KFVGTGEKMDALDVFYPERMADRILGMGDIVSLVERAQEQYDEEDARRLQKRIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF+ Q + + +MG++ + MIPGMGK V + + K +EA+I +MTP ER P
Sbjct: 330 NDFISQIQQIKKMGNIKDLAAMIPGMGKALK-DVDIDDNAFKGIEAIIHSMTPLERANPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 408
+L S R++R+A SG T V++L+ Q Q MK M M G L
Sbjct: 389 MLNGS--RKQRIAAGSGTTIVDVNRLLKQFDQTSKMMK--MATMSQGKL 433
>gi|423302186|ref|ZP_17280209.1| signal recognition particle protein [Bacteroides finegoldii
CL09T03C10]
gi|408471277|gb|EKJ89809.1| signal recognition particle protein [Bacteroides finegoldii
CL09T03C10]
Length = 440
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/400 (49%), Positives = 275/400 (68%), Gaps = 9/400 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKNFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ SRP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 AEINI-DSRPAVILMSGLQGSGKTTFSGKLARMLKSKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+ +K
Sbjct: 150 LAEQIEVPMYCELDSKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEIAAIKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPNEILFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE++E ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFIGTGEKLEAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q + +MG++ + MIPG+G PA + + + K +EA+I +MTP ER
Sbjct: 330 NDFLSQIAQIKKMGNLKELASMIPGVG---PALKNIDIDDNAFKSIEAIIYSMTPAERSN 386
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
PE+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 387 PEILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|255692684|ref|ZP_05416359.1| signal recognition particle protein [Bacteroides finegoldii DSM
17565]
gi|260621568|gb|EEX44439.1| signal recognition particle protein [Bacteroides finegoldii DSM
17565]
Length = 440
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/398 (49%), Positives = 274/398 (68%), Gaps = 5/398 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKNFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ SRP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 AEINI-DSRPAVILMSGLQGSGKTTFSGKLARMLKSKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+ +K
Sbjct: 150 LAEQIEVPMYCELDSKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEIAAIKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPNEILFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP ER PE
Sbjct: 330 NDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAERSNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 389 ILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|449982402|ref|ZP_21818256.1| signal recognition particle protein [Streptococcus mutans 5SM3]
gi|450004868|ref|ZP_21826331.1| signal recognition particle protein [Streptococcus mutans NMT4863]
gi|449174874|gb|EMB77332.1| signal recognition particle protein [Streptococcus mutans 5SM3]
gi|449189437|gb|EMB91104.1| signal recognition particle protein [Streptococcus mutans NMT4863]
Length = 516
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEDEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|160886334|ref|ZP_02067337.1| hypothetical protein BACOVA_04343 [Bacteroides ovatus ATCC 8483]
gi|299146818|ref|ZP_07039886.1| signal recognition particle protein [Bacteroides sp. 3_1_23]
gi|336414589|ref|ZP_08594935.1| signal recognition particle protein [Bacteroides ovatus 3_8_47FAA]
gi|423289502|ref|ZP_17268352.1| signal recognition particle protein [Bacteroides ovatus CL02T12C04]
gi|423297356|ref|ZP_17275417.1| signal recognition particle protein [Bacteroides ovatus CL03T12C18]
gi|156108219|gb|EDO09964.1| signal recognition particle protein [Bacteroides ovatus ATCC 8483]
gi|298517309|gb|EFI41190.1| signal recognition particle protein [Bacteroides sp. 3_1_23]
gi|335933701|gb|EGM95703.1| signal recognition particle protein [Bacteroides ovatus 3_8_47FAA]
gi|392666997|gb|EIY60508.1| signal recognition particle protein [Bacteroides ovatus CL03T12C18]
gi|392667213|gb|EIY60723.1| signal recognition particle protein [Bacteroides ovatus CL02T12C04]
Length = 440
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/398 (49%), Positives = 275/398 (69%), Gaps = 5/398 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKNFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ +RP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 AEINI-DARPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+ +K+
Sbjct: 150 LAEQIEVPMYCELDSKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEIAAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPDEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++E ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLEAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP ER PE
Sbjct: 330 NDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAERSNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 389 ILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|284047845|ref|YP_003398184.1| signal recognition particle protein [Acidaminococcus fermentans DSM
20731]
gi|283952066|gb|ADB46869.1| signal recognition particle protein [Acidaminococcus fermentans DSM
20731]
Length = 448
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/405 (48%), Positives = 285/405 (70%), Gaps = 6/405 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VV+ F + E+A+G + + P Q +VKIV +EL++L+GG
Sbjct: 32 LREVRLALLEADVNFKVVKEFTAKIRERAMGQQVDPNLTPGQYIVKIVHEELIELLGGTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L A + PTVI+L GLQG GKTT KLANYL+K GK ++VAGDVYRPAAI QL ++
Sbjct: 92 SKLNVAANPPTVIMLVGLQGAGKTTTVGKLANYLRKNGKKPLMVAGDVYRPAAITQLEVI 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV++ G +V P +IA++ L+ A D V++DTAGRL +D+ +M+ELKD+K
Sbjct: 152 GKQLDMPVFSMGDQVSPVEIARESLKRANALLCDTVLIDTAGRLHVDETLMNELKDMKTA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+LLVVDAMTGQ+A + +FN +GITG I+TKLDGD+RGGA LSVK V+ P+K
Sbjct: 212 VNPDEILLVVDAMTGQDAVTVADSFNKALGITGLIVTKLDGDARGGAVLSVKAVTNCPVK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++ L+PFYPDRMA RILGMGDVLS +EKAQE + + A++M + + F +
Sbjct: 272 FVGMGEKLDALQPFYPDRMASRILGMGDVLSLIEKAQEAIDVDSAKKMAESLKKNEFTLD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMTPEEREK 357
FL Q + V ++GS+ ++ MIPGMGK Q+ + K ++ +EA+I +MTP+ER+
Sbjct: 332 MFLDQMKQVKKLGSLESILSMIPGMGKFA-KQLEGVDLDGKEVRRLEAIIYSMTPQERQN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
P ++ S RRKR+A G+ Q V++L+ Q + + MK + G+
Sbjct: 391 PRIINGS--RRKRIAAGCGQRVQDVNRLLKQFEESKKLMKTMQGM 433
>gi|306831354|ref|ZP_07464514.1| signal recognition particle protein [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|304426590|gb|EFM29702.1| signal recognition particle protein [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
Length = 521
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL +++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDPTQQIVKIVNEELTEILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
EL + PT+I++ GLQG GKTT + KLAN L K + +++A D+YRPAAIDQL L
Sbjct: 93 ELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKDENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GSQINVPVFDMGTDHSAVEIVTNGLAQAKENHNDYVIIDTAGRLQIDEKLMEELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA + EK++ A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|198275694|ref|ZP_03208225.1| hypothetical protein BACPLE_01869 [Bacteroides plebeius DSM 17135]
gi|198271323|gb|EDY95593.1| signal recognition particle protein [Bacteroides plebeius DSM
17135]
Length = 443
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/402 (49%), Positives = 277/402 (68%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL LMGG+
Sbjct: 31 LKDVRRALLDADVNYKVAKNFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTTLMGGDT 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ K RP VIL++GLQG GKTT S KLA +K K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 AEIEL-KGRPAVILMSGLQGSGKTTFSGKLARMMKSKKNRKPLLVACDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPVY+ P QIA ++EAK K D+VIVDTAGRL ID+ MM+E++ +K+
Sbjct: 150 LGQQIEVPVYSELDSKDPVQIALNAIQEAKAKGYDLVIVDTAGRLAIDEQMMNEIEAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP L VVDAMTGQ+A FN + TG +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPDATLFVVDAMTGQDAVNTAREFNERLDFTGVVLTKLDGDTRGGAALSIRTVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 MFVGTGEKLDAVDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEER PE
Sbjct: 330 NDFLTQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEERTHPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L + RR R+A+ SG + Q+V++L+ Q Q R MK + G
Sbjct: 389 IL--NGTRRTRIAKGSGTSIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|427386247|ref|ZP_18882444.1| signal recognition particle protein [Bacteroides oleiciplenus YIT
12058]
gi|425726287|gb|EKU89152.1| signal recognition particle protein [Bacteroides oleiciplenus YIT
12058]
Length = 439
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/402 (49%), Positives = 278/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKTFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E V + +P VIL++GLQG GKTT S KLA LK K+ K +LVA DVYRPAAI+QL +
Sbjct: 91 AE-VDLEGKPAVILMSGLQGSGKTTFSGKLARMLKTKKNKKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+GVP+Y+ P +IA+ ++EAK K DVVIVDTAGRL +D+ MM+E+ +K+
Sbjct: 150 LAEQIGVPMYSEPDSKSPVKIAENAIQEAKAKGYDVVIVDTAGRLAVDEEMMNEIAAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RM+ RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPSRMSDRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP ER P
Sbjct: 330 NDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAERSNPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
LL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 389 LLNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|365118236|ref|ZP_09336957.1| signal recognition particle protein [Tannerella sp. 6_1_58FAA_CT1]
gi|363649905|gb|EHL88998.1| signal recognition particle protein [Tannerella sp. 6_1_58FAA_CT1]
Length = 440
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/410 (49%), Positives = 285/410 (69%), Gaps = 5/410 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V ++F V +A+G+ ++ V+P Q +VKIV DEL LMGG+
Sbjct: 31 LKDVRKALLDADVNYKVAKQFTDTVKAKALGMDVLTAVKPSQLMVKIVHDELALLMGGDS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
++ S P VIL++GLQG GKTT S KLA LK K+GK +LVA DVYRPAAI+QL +
Sbjct: 91 VDVNITGS-PAVILMSGLQGSGKTTFSGKLAQLLKGKRGKKPLLVACDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+G+PVY+ P QIA+ +++A++ D+VIVDTAGRL +D+ MM E+K +K
Sbjct: 150 LGEQIGIPVYSEPDCKNPVQIAQNAIKQARQDGQDLVIVDTAGRLAVDEEMMREIKAIKD 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPNEILFVVDSMTGQDAVNTAKEFNDRLDFTGVVLTKLDGDTRGGAALSIRTVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ L+ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKMDALDVFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF+ Q + + +MG++ + MIPG+GK + + + K +EA+I +MTP+ER PE
Sbjct: 330 NDFISQIQQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSVEAIIYSMTPKERSNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 409
LL S RR+R+A+ SG + Q+V++L+ Q Q R MK + G G +P
Sbjct: 389 LLNGS--RRQRIAKGSGTSIQEVNRLIKQFDQTRKMMKMVAGGKMGKMMP 436
>gi|325978265|ref|YP_004287981.1| signal recognition particle subunit FFH/SRP54 protein
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
gi|325178193|emb|CBZ48237.1| Signal recognition particle subunit FFH/SRP54 protein
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
Length = 521
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL +++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDPTQQIVKIVNEELTEILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
EL + PT+I++ GLQG GKTT + KLAN L K + +++A D+YRPAAIDQL L
Sbjct: 93 ELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKDENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GNQINVPVFDMGTDHSAVEIVTNGLAQAKENHNDYVIIDTAGRLQIDEKLMEELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA + EK++ A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|392390806|ref|YP_006427409.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Ornithobacterium rhinotracheale DSM 15997]
gi|390521884|gb|AFL97615.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Ornithobacterium rhinotracheale DSM 15997]
Length = 446
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/420 (48%), Positives = 286/420 (68%), Gaps = 12/420 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++IRRAL++ADVS V + F V ++A+G ++ + P Q + KIV DE+ +LMGGE
Sbjct: 31 IKEIRRALVDADVSYKVAKDFTNKVKDKAIGQNVLTTLNPGQLMTKIVHDEMAELMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSC-MLVAGDVYRPAAIDQLVI 119
EL + + PT+IL+AGLQG GKTT S KLA +LKK+ +LVAGDVYRPAAIDQL +
Sbjct: 91 QELNVS-ANPTIILIAGLQGSGKTTFSGKLAQFLKKKKSKKPLLVAGDVYRPAAIDQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+ VPVYT P +IA+ L++A++ N +V+IVDTAGRL ID+AMM E+++V +
Sbjct: 150 LGEQIDVPVYTEEGNKNPVEIAQNALQQARQNNNNVIIVDTAGRLAIDEAMMQEIRNVHQ 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ PTE L VVD+MTGQ+A FN + G +LTKLDGD+RGGAAL+++ V KPI
Sbjct: 210 AIKPTETLFVVDSMTGQDAVNTAKAFNEVLDYDGVVLTKLDGDTRGGAALTIRTVVDKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+++ L+ F+P RMA RILGMGDV+S VE+AQE +E+A +QKKI FDF
Sbjct: 270 KFISTGEKLDKLDVFHPSRMADRILGMGDVVSLVERAQEQFDEEEARRLQKKIAKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFLKQ + + RMG+M ++GMIPG GK + + + K +EA+I +MT +ERE P
Sbjct: 330 NDFLKQIKQIKRMGNMKDLLGMIPGAGKALKG-IEIDDDAFKHVEAIIYSMTNQERENPN 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL-------MGVMEGGSLPALS 412
++ S R++R+A+ G++ Q V+QL+ Q QM MK + M M G +P ++
Sbjct: 389 IIDAS--RKRRIARGCGRSVQDVNQLLKQFSQMGKMMKFMQSSQGKAMMKMMGSKIPGMN 446
>gi|449902748|ref|ZP_21791679.1| signal recognition particle protein [Streptococcus mutans M230]
gi|449975087|ref|ZP_21815612.1| signal recognition particle protein [Streptococcus mutans 11VS1]
gi|450100286|ref|ZP_21858716.1| signal recognition particle protein [Streptococcus mutans SF1]
gi|450122380|ref|ZP_21866721.1| signal recognition particle protein [Streptococcus mutans ST6]
gi|450169747|ref|ZP_21883158.1| signal recognition particle protein [Streptococcus mutans SM4]
gi|449177352|gb|EMB79655.1| signal recognition particle protein [Streptococcus mutans 11VS1]
gi|449220516|gb|EMC20380.1| signal recognition particle protein [Streptococcus mutans SF1]
gi|449227957|gb|EMC27347.1| signal recognition particle protein [Streptococcus mutans ST6]
gi|449246900|gb|EMC45195.1| signal recognition particle protein [Streptococcus mutans SM4]
gi|449262039|gb|EMC59496.1| signal recognition particle protein [Streptococcus mutans M230]
Length = 516
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM + + V+ E + A++ +MTPEERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVSSMTPEERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 393 LL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|322385512|ref|ZP_08059156.1| signal recognition particle protein [Streptococcus cristatus ATCC
51100]
gi|417921132|ref|ZP_12564627.1| signal recognition particle protein [Streptococcus cristatus ATCC
51100]
gi|321270250|gb|EFX53166.1| signal recognition particle protein [Streptococcus cristatus ATCC
51100]
gi|342835052|gb|EGU69310.1| signal recognition particle protein [Streptococcus cristatus ATCC
51100]
Length = 522
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 285/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKRVRERAVGHEVIDTLNPAQQIIKIVDEELTAILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PTVI++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTVIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEFPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELADVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNNQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+GRILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSGRILGMGDMLTLIEKAAQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQNMGPMEELLKMLPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG + +V++ + Q + M+ GV+ G
Sbjct: 392 DLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|262409622|ref|ZP_06086162.1| signal recognition particle protein [Bacteroides sp. 2_1_22]
gi|294643466|ref|ZP_06721279.1| signal recognition particle protein [Bacteroides ovatus SD CC 2a]
gi|294807908|ref|ZP_06766689.1| signal recognition particle protein [Bacteroides xylanisolvens SD
CC 1b]
gi|298484340|ref|ZP_07002501.1| signal recognition particle protein [Bacteroides sp. D22]
gi|336405957|ref|ZP_08586623.1| signal recognition particle protein [Bacteroides sp. 1_1_30]
gi|345509533|ref|ZP_08789129.1| signal recognition particle protein [Bacteroides sp. D1]
gi|383113535|ref|ZP_09934307.1| signal recognition particle protein [Bacteroides sp. D2]
gi|423216105|ref|ZP_17202631.1| signal recognition particle protein [Bacteroides xylanisolvens
CL03T12C04]
gi|229447054|gb|EEO52845.1| signal recognition particle protein [Bacteroides sp. D1]
gi|262352475|gb|EEZ01575.1| signal recognition particle protein [Bacteroides sp. 2_1_22]
gi|292641185|gb|EFF59390.1| signal recognition particle protein [Bacteroides ovatus SD CC 2a]
gi|294444906|gb|EFG13592.1| signal recognition particle protein [Bacteroides xylanisolvens SD
CC 1b]
gi|295087957|emb|CBK69480.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacteroides
xylanisolvens XB1A]
gi|298269494|gb|EFI11094.1| signal recognition particle protein [Bacteroides sp. D22]
gi|313695700|gb|EFS32535.1| signal recognition particle protein [Bacteroides sp. D2]
gi|335936211|gb|EGM98149.1| signal recognition particle protein [Bacteroides sp. 1_1_30]
gi|392691151|gb|EIY84401.1| signal recognition particle protein [Bacteroides xylanisolvens
CL03T12C04]
Length = 440
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/398 (49%), Positives = 274/398 (68%), Gaps = 5/398 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKNFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ +RP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 AEINI-DARPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+ +K
Sbjct: 150 LAEQIEVPMYCELDSKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEIAAIKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++E ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLEAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP ER PE
Sbjct: 330 NDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAERSNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 389 ILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|422826334|ref|ZP_16874513.1| signal recognition particle protein [Streptococcus sanguinis SK678]
gi|324994452|gb|EGC26365.1| signal recognition particle protein [Streptococcus sanguinis SK678]
Length = 524
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 284/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSNTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+V +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTDVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|256847356|ref|ZP_05552802.1| signal recognition particle protein [Lactobacillus coleohominis
101-4-CHN]
gi|256716020|gb|EEU30995.1| signal recognition particle protein [Lactobacillus coleohominis
101-4-CHN]
Length = 480
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/419 (48%), Positives = 287/419 (68%), Gaps = 13/419 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V +A G +++G+ P QQ+VKIV DEL +LMG E
Sbjct: 32 MREIRLALLEADVNFTVVKDFVKKVRTKATGAEVLKGLNPAQQIVKIVNDELTELMGSEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L A PTVI++ GLQG GKTT + KLA LK + + + +A DVYRPAAI QL
Sbjct: 92 VALNKAPHIPTVIMMVGLQGAGKTTTAGKLAYRLKNEDHARPLFIAADVYRPAAITQLQQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ + + VPV+ GT+V P +I ++GL AK + D VI+DTAGRLQID+ +MDEL ++K
Sbjct: 152 VADSIDVPVFEKGTDVDPVEIVREGLAAAKANHNDYVIIDTAGRLQIDEQLMDELANIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ A A F+ ++ +TG +LTKLDGD+RGGAA+S++ V+GKPI
Sbjct: 212 LAQPNEILLVVDAMTGQNAVATAQGFDDKLDVTGVVLTKLDGDTRGGAAMSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME+L+ F+PDRMA RILGMGD+++ +EKAQ+ +E A+E +K+ + FD+
Sbjct: 272 KFVGEGEKMENLDVFHPDRMASRILGMGDMMTLIEKAQKNFDEEQAQETMEKMRANEFDY 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q ++ MG + ++ M+PGM PA + K ++A+I++MTPEERE
Sbjct: 332 NDFLAQLDQISNMGPLENILKMMPGMAN-NPALKNLNIDPKQFLHIKAIIQSMTPEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGV--MEGGSLP 409
P+L+ +P RR+R+A +G+ +V++++ Q QMR MK N G+ M GG +P
Sbjct: 391 PDLM--NPSRRRRLAAGAGRPIVEVNRMIKQFGQMRKMMKQVTNGNFSGMQNMMGGQMP 447
>gi|29347011|ref|NP_810514.1| signal recognition protein [Bacteroides thetaiotaomicron VPI-5482]
gi|383125386|ref|ZP_09946027.1| signal recognition particle protein [Bacteroides sp. 1_1_6]
gi|29338909|gb|AAO76708.1| putative signal recognition protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251837780|gb|EES65870.1| signal recognition particle protein [Bacteroides sp. 1_1_6]
Length = 440
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/398 (49%), Positives = 275/398 (69%), Gaps = 5/398 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKTFTDTVKEKAIGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
E+ +SRP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 VEINL-ESRPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y+ P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+ +K
Sbjct: 150 LAEQIEVPMYSELDSKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEITAIKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPDEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP ER PE
Sbjct: 330 NDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAERSNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 389 ILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|422855528|ref|ZP_16902186.1| signal recognition particle protein [Streptococcus sanguinis SK1]
gi|327462217|gb|EGF08544.1| signal recognition particle protein [Streptococcus sanguinis SK1]
Length = 524
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 284/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSNTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+V +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTDVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|167761983|ref|ZP_02434110.1| hypothetical protein BACSTE_00328 [Bacteroides stercoris ATCC
43183]
gi|167700215|gb|EDS16794.1| signal recognition particle protein [Bacteroides stercoris ATCC
43183]
Length = 440
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/412 (48%), Positives = 280/412 (67%), Gaps = 5/412 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKSFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ S+P VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 AEINI-DSKPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y+ P IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+ +K
Sbjct: 150 LAEQIEVPMYSEPDSKDPVSIAQNAIQEAKAKGYDLVIVDTAGRLAVDEEMMNEIAAIKS 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRTVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEER P
Sbjct: 330 NDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEERSNPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P L
Sbjct: 389 ILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMPKL 438
>gi|291563269|emb|CBL42085.1| signal recognition particle protein [butyrate-producing bacterium
SS3/4]
Length = 454
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 285/400 (71%), Gaps = 4/400 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++ ALLEADVS VV++F+ +V E+A+G ++ + P Q ++KIV +ELVKLMG E
Sbjct: 32 LKEVKMALLEADVSFKVVKQFISSVQERAIGQDVLESLTPGQMVIKIVNEELVKLMGSET 91
Query: 61 SELVFA-KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ ++ TVI++ GLQG GKTT +AKLA K +G+ +L A DVYRPAAI QL +
Sbjct: 92 TEIALKPQNEITVIMMIGLQGAGKTTTTAKLAGKFKAKGRKPLLAACDVYRPAAIKQLQV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
GE+VGVPV+T G P IAK +E A+K+ +++V +DTAGRLQID++MMDEL ++K
Sbjct: 152 NGEKVGVPVFTMGDNQNPVNIAKAAVEHARKEGMNLVFLDTAGRLQIDESMMDELVNIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ + +LVVDAMTGQ+A + +FN +IG+ G ILTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 AVEIDQTILVVDAMTGQDAVNVAGSFNDKIGVDGVILTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
VG GE++ DLE FYPDRMA RILGMGD+LS +EKA+ + +E A+EM +K+ A FDF
Sbjct: 272 LYVGMGEKLSDLEQFYPDRMASRILGMGDILSLIEKAEFEVSEEKAKEMSQKLRKAEFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q R + +MG M+ ++ M+PGM ++ V E+S+ +EA+I +MT ER P
Sbjct: 332 NDFLDQMRQIKKMGGMNSILNMMPGMSQM-KGNVEIDERSMDKVEAIILSMTKGERANPS 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LL +P R++R+A+ +G +V+++V Q Q + MK L
Sbjct: 391 LL--NPSRKQRIAKGAGVDIAEVNRIVKQFEQSKKLMKQL 428
>gi|325860535|ref|ZP_08173639.1| signal recognition particle protein [Prevotella denticola CRIS
18C-A]
gi|325481920|gb|EGC84949.1| signal recognition particle protein [Prevotella denticola CRIS
18C-A]
Length = 456
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 280/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKI+ DEL +LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKSFTDTVKKKALGMNVLTAVKPGQLMVKIMHDELAELMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L +RPT+IL++GLQG GKTT S KLAN LK K+ K +LVA DVYRPAAI+QL +
Sbjct: 91 VGLNLV-NRPTIILMSGLQGSGKTTFSGKLANMLKTKEHKHPLLVACDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGVPVY+ ++IA + EAK K DVVI+DTAGRL +D+ MM+E++ +K+
Sbjct: 150 VGEQVGVPVYSEPDNKTVNEIADHAIAEAKAKGNDVVIIDTAGRLAVDEDMMNEIESLKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 HVTPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFIGTGEKMEAVDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 389 VLNNS--RRQRIAKGSGTNLQEVNRLIKQFDQTRKMMKMVTG 428
>gi|373495378|ref|ZP_09585963.1| signal recognition particle protein [Eubacterium infirmum F0142]
gi|371964856|gb|EHO82360.1| signal recognition particle protein [Eubacterium infirmum F0142]
Length = 447
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/401 (48%), Positives = 283/401 (70%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ FV V E+ +G +++ + P QQ++KIV EL+ LMGG
Sbjct: 32 MREVKLALLEADVNFKVVKEFVAIVKEKCLGAEVLKSLTPAQQIIKIVNSELIDLMGGAG 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L ++ S TV+++ GLQG GKTT KLA++LK+ GK MLVA D+YRPAAIDQL ++
Sbjct: 92 SKLTYSPSGFTVLMMVGLQGTGKTTTCGKLASFLKQNGKKPMLVACDIYRPAAIDQLEVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+ V PV+T QIA E+A++K DV+I+DTAGRLQID+++M+EL +K
Sbjct: 152 GKAVNTPVFTMRESKDAVQIALAAKEDAERKGFDVLIIDTAGRLQIDESLMEELASMKSA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDA+TGQ+A FN ++GI G I+TK+DGDSRGGAALS K+V+GKPIK
Sbjct: 212 VRPHEILLVVDALTGQDAVNAADGFNRKLGIDGIIMTKMDGDSRGGAALSAKKVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+ + LEPF+P+R+A RILGMGD+LS +EKA++ +E AE++++KI F
Sbjct: 272 FLGTGEKSDALEPFHPERLASRILGMGDMLSLIEKAEQAYDEEQAEKLERKIRKNQFTLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+Q V +MG +++++ M+PGMG KI+ A + + EK + MEA+I +MT ER+ P
Sbjct: 332 DFLEQMGQVRKMGGLAKIMDMLPGMGGAKISEADIEKGEKEFRTMEAIIRSMTVAERKNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LL S RRKR+A SG+T V++++++ + + MK
Sbjct: 392 GLLNAS--RRKRIAAGSGQTVNSVNKVISKYEESKKLMKQF 430
>gi|189467237|ref|ZP_03016022.1| hypothetical protein BACINT_03622 [Bacteroides intestinalis DSM
17393]
gi|189435501|gb|EDV04486.1| signal recognition particle protein [Bacteroides intestinalis DSM
17393]
Length = 439
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/402 (49%), Positives = 278/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKTFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ + +P VIL++GLQG GKTT S KLA LK K+ K +LVA DVYRPAA++QL +
Sbjct: 91 AEIDL-EGKPAVILMSGLQGSGKTTFSGKLARMLKTKKNKKPLLVACDVYRPAAVEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+GVP+Y+ P +IA+ ++EAK K DVVIVDTAGRL +D+ MM+E+ +K+
Sbjct: 150 LAEQIGVPMYSEPDSKNPVKIAENAIQEAKAKGYDVVIVDTAGRLAVDEEMMNEIAAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RM+ RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPSRMSDRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP ER P
Sbjct: 330 NDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAERSNPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
LL S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 389 LLNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|184155710|ref|YP_001844050.1| signal recognition particle protein [Lactobacillus fermentum IFO
3956]
gi|183227054|dbj|BAG27570.1| signal recognition particle protein [Lactobacillus fermentum IFO
3956]
Length = 484
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/417 (47%), Positives = 286/417 (68%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A G +++G+ P QQ+VKIV DEL ++MG
Sbjct: 40 MREIRLALLEADVNFKVVKDFVKTVREKAAGAEVLKGLNPAQQIVKIVNDELTEMMGETA 99
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
+ L + PTVI++ GLQG GKTT + KLA +LKK+ + + +A DVYRPAAI QL
Sbjct: 100 TPLNKSAHIPTVIMMVGLQGAGKTTTAGKLAKHLKKEENARPLFIAADVYRPAAITQLQQ 159
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ + VPV+ GT+V P +I +QG+E AK+K+ D VI+DTAGRLQID+ +M+EL +K
Sbjct: 160 VAASIDVPVFEMGTDVDPVEIVRQGMEVAKEKHNDYVIIDTAGRLQIDEQLMEELAKIKE 219
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ A F+ ++ ITG +LTKLDGD+RGGAA+S++ V+GKPI
Sbjct: 220 LAKPDEILLVVDAMTGQNAVNTAQGFDDQLDITGVVLTKLDGDTRGGAAMSIRAVTGKPI 279
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M++L+ F+PDRMA RILGMGD+++ +EKAQE QE A + K+ +FDF
Sbjct: 280 KFVGEGEKMDNLDVFHPDRMASRILGMGDMMTLIEKAQENFDQEQATQAMAKMKENSFDF 339
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q + +MG + ++ M+PGM PA + K ++A+I +MTPEERE
Sbjct: 340 NDFLDQMDQITKMGPLEDLLKMMPGMAN-NPALQNINLDPKQFAHIKAIIYSMTPEEREN 398
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+++ +P RR+R+A SG+ +V++++ Q QMR M+ + G+L + NL
Sbjct: 399 PDMM--NPSRRRRLAAGSGRPIVEVNRMIKQFNQMRKMMRQV----TNGNLSGMENL 449
>gi|319901661|ref|YP_004161389.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacteroides
helcogenes P 36-108]
gi|319416692|gb|ADV43803.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacteroides
helcogenes P 36-108]
Length = 440
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/402 (49%), Positives = 279/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKNFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ S+P+VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 AEINI-DSKPSVILMSGLQGSGKTTFSGKLARMLKAKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y+ P IA+ ++EAK+K D+VIVDTAGRL +D+ MM+E+ +K+
Sbjct: 150 LAEQIEVPMYSEPDSKDPVTIAQNAIQEAKEKGYDLVIVDTAGRLAVDEEMMNEIAAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E+L VVD+MTGQ+A FN + G ILTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AIDPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVILTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP ER PE
Sbjct: 330 NDFLNQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIHSMTPAERSNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 389 ILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|403745347|ref|ZP_10954285.1| signal recognition particle protein [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121575|gb|EJY55868.1| signal recognition particle protein [Alicyclobacillus hesperidum
URH17-3-68]
Length = 467
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/403 (50%), Positives = 280/403 (69%), Gaps = 3/403 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALL ADV++ VVR FV V E+AVG L + + P QQ+VKIV +EL +LMGG
Sbjct: 10 MREIRLALLAADVNVKVVRDFVNRVRERAVGQDLQKSLTPGQQVVKIVYEELTELMGGAQ 69
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ + A PTV++L GLQG GKTT AKL ++ +LVA DVYRPAAIDQL +L
Sbjct: 70 ARIQMAPKPPTVVMLVGLQGAGKTTAIAKLGLAFRQHQHRPLLVAADVYRPAAIDQLKVL 129
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV+ G + P IAK L EA+K D+V++DTAGRL ID +M+EL+ +K
Sbjct: 130 GKQIDIPVFDQGADANPVAIAKASLAEAEKAGADIVLIDTAGRLHIDDQLMEELEGMKAA 189
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ PTE+LLVVDAMTGQ+A + TF+ +G+TG ILTKLDGD+RGGAAL+V+ V+G PIK
Sbjct: 190 VQPTEILLVVDAMTGQDAVHVAETFHQRLGVTGVILTKLDGDARGGAALTVRAVTGCPIK 249
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPF+PDR+A RILGMGDVLS +E+AQE + E A+EM+ ++ +++F N
Sbjct: 250 YVGLGEKIEPLEPFHPDRLASRILGMGDVLSLIERAQERIDLEKAKEMEARMRTSSFTLN 309
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DF + R V +G + +V+ MIPGM ++ + + ++ M+A+I +MTP ERE P
Sbjct: 310 DFQEMFRQVRNLGPLDQVLKMIPGMNRMKGLENIDLNDRRFLRMDAIISSMTPAEREDPS 369
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
++ S RR+R+A SG T ++V+QL+ Q Q R MK G+
Sbjct: 370 VMNAS--RRRRIANGSGTTVREVNQLLNQFEQTREMMKRFTGM 410
>gi|333904965|ref|YP_004478836.1| signal recognition particle protein [Streptococcus parauberis KCTC
11537]
gi|333120230|gb|AEF25164.1| signal recognition particle protein [Streptococcus parauberis KCTC
11537]
Length = 524
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 281/401 (70%), Gaps = 4/401 (0%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ + E+AVG +I + P QQ++KIV +EL ++G E S
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRIRERAVGHEIIDTLDPTQQILKIVNEELTAILGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+V + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIVKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ +I +GLE+A++ D V++DTAGRLQID+ +M EL+DVK +
Sbjct: 153 GQQINVPVFDMGTDHSAVEIVTKGLEQARENRNDYVLIDTAGRLQIDEKLMGELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLV+D+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++G+PIK
Sbjct: 213 AQPNEILLVIDSMIGQEAANVADEFNKQLEITGVVLTKIDGDTRGGAALSVREITGRPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + Q+ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDQQKSLELVEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF+ Q V MG M ++ MIPGM G A ++ EK + A++ +MTP ERE PE
Sbjct: 333 DFIAQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDEKQIARKRAIVSSMTPTERENPE 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 400
LL +P RR+R+A SG T +V++ + Q + M+ +M
Sbjct: 393 LL--NPSRRRRIASGSGNTFVEVNKFIKDFNQAKTMMQGMM 431
>gi|387133281|ref|YP_006299253.1| signal recognition particle protein [Prevotella intermedia 17]
gi|386376129|gb|AFJ09513.1| signal recognition particle protein [Prevotella intermedia 17]
Length = 450
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/415 (48%), Positives = 283/415 (68%), Gaps = 5/415 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL +LMGG+
Sbjct: 31 LKDVRRALLDADVNYKVAKSFTDTVKQKALGMNVLTAVKPGQLMVKIVHDELAELMGGDA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ +++P +IL++GLQG GKTT S KLAN LK K+ K +LVA DVYRPAAI QL +
Sbjct: 91 VGIKL-ENKPAIILMSGLQGSGKTTFSGKLANLLKTKEHKKPLLVACDVYRPAAIQQLNV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GE VGVPVY+ + IA+ +++AK DVVI+DTAGRL +D MMDE++ +K
Sbjct: 150 VGESVGVPVYSEPENKNVNAIAENAIKQAKANGNDVVIIDTAGRLAVDAEMMDEIESLKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 HVNPDEVLFVVDSMTGQDAVNTAKEFNDRLNFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME L+ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFIGTGEKMEALDVFHPSRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFYNQIQQIKKMGNLKDLAAMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+L S RR+R+A+ SG Q+V++LV Q Q R MK + G G + + N+
Sbjct: 389 VLNNS--RRQRIAKGSGTNIQEVNRLVKQFEQTRKMMKMVTGSKMAGMMGKMKNM 441
>gi|436840520|ref|YP_007324898.1| signal recognition particle-like (SRP) GTPase [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432169426|emb|CCO22794.1| signal recognition particle-like (SRP) GTPase [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 508
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/394 (50%), Positives = 279/394 (70%), Gaps = 4/394 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ V E+A+G + + + P QQL+K+V DEL +L+GGE
Sbjct: 31 MREVRLALLEADVNYKVVKDFVERVKERALGQEVQKSLSPGQQLIKVVNDELTELLGGEQ 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L F K + + I++ GLQG GKTT SAK+A YL+++ LV D+YRPAAI+QL +L
Sbjct: 91 EGLNFTKGKLSKIMMVGLQGAGKTTSSAKIALYLRRKKFKPYLVPADIYRPAAIEQLNVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PVY + TE+ P I + L +A++ DVV+ DTAGRL ID+ +MDEL +K
Sbjct: 151 GKQLDMPVYPSTTEMNPVDICRDALSKAEEAGCDVVLFDTAGRLHIDETLMDELVSIKAA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+L V DAMTGQ+A + +TF+ ++GITG +LTK+DGD+RGGAALS+K V+GK +K
Sbjct: 211 CAPDEILFVADAMTGQDAVNVASTFDEKLGITGVVLTKMDGDARGGAALSIKSVTGKAVK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++ +LE FYPDR A RILGMGDVLS +EKAQ VM + +AE++ K A FD
Sbjct: 271 FVGMGEKLSELELFYPDRAASRILGMGDVLSLIEKAQSVMGEGEAEKLTDKFRKAQFDLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF Q R + ++GSMS ++ MIPG+GK+T + +K L +EA+I +MT EER+KP
Sbjct: 331 DFRTQMRRMKKIGSMSSIMKMIPGLGKLTKQLGDIEVPDKELNRIEAIISSMTMEERKKP 390
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQM 392
+L+ +P RR+R+A+ SG Q+V+Q++ QM
Sbjct: 391 KLI--NPSRRQRIAKGSGVEVQEVNQMLKNFEQM 422
>gi|430750342|ref|YP_007213250.1| signal recognition particle protein [Thermobacillus composti KWC4]
gi|430734307|gb|AGA58252.1| signal recognition particle protein [Thermobacillus composti KWC4]
Length = 464
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/400 (50%), Positives = 281/400 (70%), Gaps = 3/400 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F+ V E+A+G +++ P ++ IV EL +LMGG
Sbjct: 33 MREVRLALLEADVNFKVVKDFIARVKERAIGQEVVKSFTPGMVIIDIVNKELTELMGGTQ 92
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L A PTVI++AGLQG GKTT SAKLA L+K G +L A D+YRPAAI QL +L
Sbjct: 93 AKLAKAAKPPTVIMMAGLQGAGKTTASAKLALMLQKGGHKPLLAACDIYRPAAIKQLQVL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+GVPV++ G +V P IA+Q L+ AK + D +I+DTAGRL ID+A+M+EL+ +
Sbjct: 153 GGQIGVPVFSLGDKVNPVDIARQALQHAKDEGRDYLIIDTAGRLHIDEALMEELRQIHEG 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVDAM GQEA + +F+ ++ +TG +LTKLDGD+RGGAA+SVK V+G PIK
Sbjct: 213 VKPDEVLLVVDAMIGQEAVNVAQSFHEQLELTGIVLTKLDGDTRGGAAISVKAVTGCPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPF+PDRMA RILGMGD+LS +EKAQ + E A EM++K+ +A F F
Sbjct: 273 FVGMGEKIEPLEPFHPDRMASRILGMGDMLSLIEKAQAAIDAEKAAEMERKMRAAEFTFE 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V ++G + +++ M+PGMGK+ + ++ E+ L +EA++++MT EE+ PE
Sbjct: 333 DFLEQMAQVRKLGPLDQLLEMLPGMGKLKQLKDIQIDERQLARVEAIVKSMTTEEKRNPE 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+L S RRKR+A SG T V++L+ Q MR MK
Sbjct: 393 ILNHS--RRKRIAAGSGTTVADVNRLIKQFDDMRRMMKQF 430
>gi|319649591|ref|ZP_08003747.1| signal recognition particle [Bacillus sp. 2_A_57_CT2]
gi|317398753|gb|EFV79435.1| signal recognition particle [Bacillus sp. 2_A_57_CT2]
Length = 450
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/406 (49%), Positives = 297/406 (73%), Gaps = 4/406 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFVKKVSERAVGQEVLKSLTPGQQVIKVVKEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ + PTVI++ GLQG GKTT + KLAN L KK ++ MLVA D+YRPAAI QL
Sbjct: 92 SKIAVSNRPPTVIMMVGLQGAGKTTTTGKLANLLRKKYNRNPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAGRL +D+A+MDELK +K
Sbjct: 152 LGKQLNMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGRLHVDEALMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+ LVVDAMTGQ+A + +FN +G+TG +LTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 LSNPDEIFLVVDAMTGQDAVNVAQSFNDLLGLTGVVLTKLDGDTRGGAALSIRSVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ LE F+P+RMA RILGMGDVLS +EKAQ + +E A+E+++K+ +A+F F
Sbjct: 272 KFVGLGEKLDALEAFHPERMASRILGMGDVLSLIEKAQANVDEEKAKELEQKMRTASFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL Q V MG + ++ M+PG KI ++ EK + +EA+I++MT EE+ P
Sbjct: 332 DDFLDQLGQVRSMGPLDELLKMMPGANKIKGLNNIQIDEKQITHVEAIIKSMTKEEKTHP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 404
E++ S RRKR+A+ SG+T +V++L+ Q M+ MK + G+ +
Sbjct: 392 EIINAS--RRKRIAKGSGRTVPEVNRLLKQFEDMKKMMKQMAGMQQ 435
>gi|424787751|ref|ZP_18214515.1| signal recognition particle protein [Streptococcus intermedius BA1]
gi|422113505|gb|EKU17243.1| signal recognition particle protein [Streptococcus intermedius BA1]
Length = 524
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/409 (49%), Positives = 286/409 (69%), Gaps = 13/409 (3%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRMALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEAARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFSLGTEVAAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV +++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNDQLEVTGVILTKIDGDTRGGAALSVCQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEERE 356
DF+ Q V MG M ++ MIPGM PA +V E E + K A++ +MTP ERE
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSMTPAERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 390 NPNLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSVMQ---GVMSG 433
>gi|450182820|ref|ZP_21888463.1| signal recognition particle protein [Streptococcus mutans 24]
gi|449244145|gb|EMC42531.1| signal recognition particle protein [Streptococcus mutans 24]
Length = 516
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/406 (47%), Positives = 282/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM + + V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVSSMTPEERENPN 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 393 LL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|450046423|ref|ZP_21838937.1| signal recognition particle protein [Streptococcus mutans N34]
gi|449198865|gb|EMB99957.1| signal recognition particle protein [Streptococcus mutans N34]
Length = 516
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|145219743|ref|YP_001130452.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
phaeovibrioides DSM 265]
gi|145205907|gb|ABP36950.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
phaeovibrioides DSM 265]
Length = 449
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/400 (52%), Positives = 277/400 (69%), Gaps = 5/400 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDI+RALL ADV+ VV++ V+ V ++++G G+I+ V P Q +VKIV DEL +LMGGE
Sbjct: 31 MRDIKRALLGADVNYKVVKKLVEDVRQKSLGEGVIKSVSPAQMIVKIVSDELTELMGGEQ 90
Query: 61 SELVFAKSR-PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
L + SR P V+++AGLQG GKTT +AKLA LKK G++ +LVA DVYRPAA+DQL
Sbjct: 91 KPLALSSSRLPAVVMVAGLQGSGKTTFAAKLAKRLKKSGRNPLLVAADVYRPAAVDQLKT 150
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG +V VPV++ E ++A QGLE AK DV+IVDTAGRLQID AMM E + +K
Sbjct: 151 LGAEVSVPVFSI-EEKDAMKVAMQGLEAAKAGAHDVLIVDTAGRLQIDDAMMAEAEALKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
L P E+L VVD+M GQEA FN + G +LTKLDGDSRGGAALS++ V KPI
Sbjct: 210 ALKPDELLFVVDSMMGQEAVNTAKAFNDRLDFDGVVLTKLDGDSRGGAALSIRHVVEKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+++DL+ FYPDRMA RILGMGD++SFVEKAQE + E +MQKK+M FD
Sbjct: 270 KFMSVGEKVDDLDQFYPDRMAQRILGMGDIVSFVEKAQESLDMEATLQMQKKLMKNEFDL 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MGSM +I M+PG+ K+ P Q E K +EA+I +MT EE+ +PE
Sbjct: 330 NDFFDQLQQLKKMGSMQSLIEMVPGLNKMVPKQDLE-NLDFKPIEAIISSMTKEEKSRPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ S RR+R+A SG Q V+ L+ Q +M+ M+++
Sbjct: 389 IINGS--RRQRIALGSGTRVQDVNMLLKQFGEMKKMMRSV 426
>gi|325297211|ref|YP_004257128.1| signal recognition particle protein [Bacteroides salanitronis DSM
18170]
gi|324316764|gb|ADY34655.1| signal recognition particle protein [Bacteroides salanitronis DSM
18170]
Length = 441
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/398 (50%), Positives = 273/398 (68%), Gaps = 5/398 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL KLMGG+
Sbjct: 31 LKDVRRALLDADVNYKVAKNFTDTVKEKAMGQNVLTAVKPSQLMVKIVHDELAKLMGGDT 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
EL K RP VIL++GLQG GKTT S KLA K K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 IELDL-KGRPAVILMSGLQGSGKTTFSGKLARMFKTKKNRKPLLVACDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG QV VPVY+ P QIAK ++EAK K D+VIVDTAGRL +D+ MM+E++ +K
Sbjct: 150 LGTQVEVPVYSEPESKDPVQIAKNAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEIETIKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P L VVDAMTGQ+A FN + TG +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AITPDATLFVVDAMTGQDAVNTAREFNERLDFTGVVLTKLDGDTRGGAALSIRTVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 LFVGTGEKLDAVDLFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEER +PE
Sbjct: 330 NDFLSQIHQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEERTRPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
+L S RR R+A+ SG + Q+V++L+ Q Q R MK
Sbjct: 389 ILNGS--RRNRIAKGSGTSIQEVNRLLKQFDQTRKMMK 424
>gi|347534366|ref|YP_004841036.1| Signal recognition particle protein [Lactobacillus sanfranciscensis
TMW 1.1304]
gi|345504422|gb|AEN99104.1| Signal recognition particle protein [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 479
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/417 (48%), Positives = 289/417 (69%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALL+ADV+ VVR FV+ V +A G ++ G+ P QQ++KIV DEL ++MGGE
Sbjct: 32 MREIRLALLDADVNFTVVRDFVKKVQAKAKGENVLEGLNPGQQIIKIVDDELTEMMGGET 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
+ L + PT+I++AGLQG GKTT KLA LK+ + +++A DVYRPAAI+QL
Sbjct: 92 TTLKKSNKIPTIIMMAGLQGAGKTTTVGKLAKMLKEDDNARPLMIAADVYRPAAIEQLQQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV+ GTEV P +I + GL+ AK+ + D V +DTAGRLQID+ +M+ELK++K
Sbjct: 152 IGKQIDVPVFEEGTEVNPVKIVEDGLKVAKENHNDYVFIDTAGRLQIDEKLMNELKEIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V PT++LLVVDAMTGQ A + FN + ITG +LTKLDGD+RGGAALS+K V+GKPI
Sbjct: 212 VAKPTDILLVVDAMTGQNAVNMAEGFNEALDITGVVLTKLDGDTRGGAALSIKAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
G+GE+M++L+ F+PDRMA RILGMGDVLS VEK ++ + ++ + E+ +K+ F+F
Sbjct: 272 LFTGQGEKMDNLDVFHPDRMASRILGMGDVLSLVEKTKKNIDEKKSMELAEKMKENTFNF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
+DFL Q + + MG + ++ MIPGM PA V K L ++A+I +MT EERE
Sbjct: 332 DDFLDQLQQIQNMGPLKNLMAMIPGMAN-NPALQNVDMDPKDLDRIKAIIYSMTNEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P++L +P RR+R+A+ S + Q V++L+ Q Q MK +M + G++ + N+
Sbjct: 391 PDVL--NPSRRRRIAKGSAQPIQSVNRLIKQFNQ----MKKMMNQISNGNMSGMENM 441
>gi|329955639|ref|ZP_08296547.1| signal recognition particle protein [Bacteroides clarus YIT 12056]
gi|328526042|gb|EGF53066.1| signal recognition particle protein [Bacteroides clarus YIT 12056]
Length = 440
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/412 (48%), Positives = 280/412 (67%), Gaps = 5/412 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKSFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ S+P VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 AEINI-DSKPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y+ P IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+ +K
Sbjct: 150 LAEQIEVPMYSEPDSKDPVAIAQNAIQEAKAKGYDLVIVDTAGRLAVDEEMMNEIAAIKA 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEER P
Sbjct: 330 NDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEERSNPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P L
Sbjct: 389 ILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMPKL 438
>gi|295094758|emb|CBK83849.1| signal recognition particle protein [Coprococcus sp. ART55/1]
Length = 448
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/409 (49%), Positives = 283/409 (69%), Gaps = 10/409 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++++RALLEADV+ VV+ FV++VS++AVG +++G+ P ++KIV++E+ KLMG E+
Sbjct: 32 MKEVKRALLEADVNFKVVKSFVKSVSDRAVGEEVLKGLNPGHMVIKIVKEEMDKLMGSEM 91
Query: 61 SELVFAKSRP----TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQ 116
+E+ K RP T+I++ GLQG GKTT +AKLA K +GK +LVA DVYRPAAI Q
Sbjct: 92 TEI---KLRPSNEITIIMMCGLQGAGKTTTAAKLAYQFKNKGKKPLLVACDVYRPAAIKQ 148
Query: 117 LVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD 176
L + GE+VGVPV+ G KP IAK ++ A K N+++V +DTAGRL +D+ MM+EL +
Sbjct: 149 LQVNGEKVGVPVFAMGDNNKPLDIAKAAVQHAAKNNINLVFLDTAGRLHVDEDMMNELAE 208
Query: 177 VKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSG 236
+K L+ +L VD+MTGQ+A + TTFN +IGI G ILTKLDGD+RGGAALS+K V+G
Sbjct: 209 IKENLDIAYTILTVDSMTGQDAVNVATTFNDKIGIDGVILTKLDGDTRGGAALSIKAVTG 268
Query: 237 KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN 296
KPI G GE++ DLEPFYPDRMA RILGMGDV S +EKAQ + +E A+EM++K A+
Sbjct: 269 KPILYSGMGEKLTDLEPFYPDRMASRILGMGDVESLIEKAQSAIDEEKAKEMEQKFRKAS 328
Query: 297 FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEERE 356
FDFNDFL Q + +MG M ++ M+PGM V E + K +A++ +MTP ER
Sbjct: 329 FDFNDFLDQMAQLEQMGGMQEILSMMPGMAS-QMKNVEIDENAAKTPKAIVLSMTPRERS 387
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+ + SP R+KR+A +G V++ + Q Q + MK + G+M G
Sbjct: 388 LQDPI--SPSRKKRIADGAGVQIADVNRFLKQFEQSKKMMKQMSGMMGG 434
>gi|449886043|ref|ZP_21785923.1| signal recognition particle protein [Streptococcus mutans SA41]
gi|449915593|ref|ZP_21796362.1| signal recognition particle protein [Streptococcus mutans 15JP3]
gi|449944517|ref|ZP_21806769.1| signal recognition particle protein [Streptococcus mutans 11A1]
gi|449947928|ref|ZP_21807721.1| signal recognition particle protein [Streptococcus mutans 11SSST2]
gi|449988781|ref|ZP_21820736.1| signal recognition particle protein [Streptococcus mutans NVAB]
gi|450038971|ref|ZP_21835979.1| signal recognition particle protein [Streptococcus mutans T4]
gi|449148475|gb|EMB52342.1| signal recognition particle protein [Streptococcus mutans 11A1]
gi|449156236|gb|EMB59711.1| signal recognition particle protein [Streptococcus mutans 15JP3]
gi|449168107|gb|EMB70945.1| signal recognition particle protein [Streptococcus mutans 11SSST2]
gi|449183439|gb|EMB85422.1| signal recognition particle protein [Streptococcus mutans NVAB]
gi|449200928|gb|EMC01945.1| signal recognition particle protein [Streptococcus mutans T4]
gi|449254689|gb|EMC52587.1| signal recognition particle protein [Streptococcus mutans SA41]
Length = 516
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|337281992|ref|YP_004621463.1| signal recognition particle protein [Streptococcus parasanguinis
ATCC 15912]
gi|335369585|gb|AEH55535.1| signal recognition particle protein [Streptococcus parasanguinis
ATCC 15912]
Length = 523
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/407 (48%), Positives = 289/407 (71%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKRVRERAVGHEVIETLNPAQQIVKIVDEELTAILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN L K+ K+ +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLVKEEKARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M EL+DVK +
Sbjct: 153 GQQINVPVFSLGTEVPAVEIVRQGLEQARANHNDYVLIDTAGRLQIDEKLMGELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 VEPNEILLVVDAMIGQEAANVAREFNEQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+GRILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSGRILGMGDMLTLIEKASQEYDEKRSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM PA ++ E+ + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNLKVDEREIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG + +V++ + Q + M+ GV+ G
Sbjct: 392 DLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|449918559|ref|ZP_21797416.1| signal recognition particle protein [Streptococcus mutans 1SM1]
gi|449160184|gb|EMB63462.1| signal recognition particle protein [Streptococcus mutans 1SM1]
Length = 516
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/406 (47%), Positives = 282/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM + + V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVSSMTPEERENPN 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 393 LL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|450132637|ref|ZP_21870177.1| signal recognition particle protein [Streptococcus mutans NLML8]
gi|449152802|gb|EMB56500.1| signal recognition particle protein [Streptococcus mutans NLML8]
Length = 516
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/408 (48%), Positives = 285/408 (69%), Gaps = 11/408 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGK---ITPAQVREAEKSLKIMEAMIEAMTPEEREK 357
DF++Q V MG M ++ MIPGM ++ +V E E + K A++ +MTPEERE
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEGEIARK--RAIVSSMTPEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 391 PDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|222153046|ref|YP_002562223.1| signal recognition particle protein [Streptococcus uberis 0140J]
gi|222113859|emb|CAR41999.1| signal recognition particle protein [Streptococcus uberis 0140J]
Length = 521
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/406 (48%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ + E+A+G +I + P QQ++KIV +EL +++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRIRERAIGHEIIDTLDPTQQILKIVNEELTQILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+V + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIVKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ +I +GLE A+ D V++DTAGRLQID +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTDHSAVEIVTKGLELARDNRNDYVLIDTAGRLQIDDKLMAELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + Q+ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDQQRSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ EK + A++ +MT EERE PE
Sbjct: 333 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDEKQIARKRAIVSSMTKEERENPE 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKAMMQ---GVMSG 433
>gi|419800021|ref|ZP_14325332.1| signal recognition particle protein [Streptococcus parasanguinis
F0449]
gi|385696390|gb|EIG26878.1| signal recognition particle protein [Streptococcus parasanguinis
F0449]
Length = 523
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/407 (48%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKRVRERAVGHEVIETLNPAQQIVKIVDEELTAILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M EL+DVK +
Sbjct: 153 GQQINVPVFSLGTEVPAVEIVRQGLEQARANHNDYVLIDTAGRLQIDEKLMGELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 AKPNEILLVVDAMIGQEAANVAREFNEQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+GRILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSGRILGMGDMLTLIEKASQEYDEKRSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM PA ++ E+ + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNLKVDEREIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GV+ G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|257124951|ref|YP_003163065.1| signal recognition particle protein [Leptotrichia buccalis
C-1013-b]
gi|257048890|gb|ACV38074.1| signal recognition particle protein [Leptotrichia buccalis
C-1013-b]
Length = 446
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/397 (50%), Positives = 281/397 (70%), Gaps = 2/397 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ V + FV + E+A+G +I GV P QQ VKIV DELV+++GG
Sbjct: 31 LREVRLALLEADVNYSVAKNFVAKIREKALGEQVISGVNPTQQFVKIVNDELVEVLGGSN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ A PT+++L+GLQG GKTT S KLA +L+ +G+ L+ DVYRPAA QL +L
Sbjct: 91 VSIAKADKNPTIVMLSGLQGAGKTTFSGKLAKHLRSKGEKPFLIGADVYRPAAKKQLKVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQV VPV+T + P +I KQG+E +K ++ VI+DTAGRL ID+ +M EL+D+K
Sbjct: 151 GEQVKVPVFTIDESIDPLEIVKQGIEASKTEHATYVIIDTAGRLHIDEQLMHELQDIKDC 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD MTGQ+A + FN ++ ITG +LTKLDGD+RGGAALSVKEV+GKPIK
Sbjct: 211 FNPNEILLVVDGMTGQDAVNVAKEFNEQLDITGVVLTKLDGDTRGGAALSVKEVAGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+ GE+++D+ PF+PDR+A RILGMGDV+S VEKAQE + +++A++M++K FDF
Sbjct: 271 FISEGEKLDDIAPFHPDRLASRILGMGDVVSLVEKAQEAIDEKEAKKMEEKFRKNQFDFE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ + + +MGS++ ++ MIPG+ + + AEK +K +EA+I +MT +ER P+L
Sbjct: 331 DFLKQFKMIRKMGSIAGIMKMIPGV-DTSMIDMGMAEKEMKKVEAIIFSMTVQERRDPKL 389
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
L R+ R+A+ SG V++L+ Q QM+ MK
Sbjct: 390 LKNGS-RKMRIAKGSGVQVNDVNKLIKQFEQMKQMMK 425
>gi|423068523|ref|ZP_17057311.1| signal recognition particle protein [Streptococcus intermedius
F0395]
gi|355366778|gb|EHG14495.1| signal recognition particle protein [Streptococcus intermedius
F0395]
Length = 524
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/409 (48%), Positives = 287/409 (70%), Gaps = 13/409 (3%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN LKK+ +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEEAARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFSLGTEVPAVEIIRQGLEQAKANHNDYVLIDTAGRLQIDEKLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+P+RM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPNRMSSRILGMGDMLTLIEKASQEYDEQKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEERE 356
DF+ Q V MG M ++ MIPGM PA +V E E + K A++ +MTP ERE
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPAMKNFKVDENEIARK--RAIVSSMTPAERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 390 NPNLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSVMQ---GVMSG 433
>gi|386086552|ref|YP_006002426.1| SRP54, signal recognition particle GTPase protein, putative
[Streptococcus thermophilus ND03]
gi|387909791|ref|YP_006340097.1| SRP54, signal recognition particle GTPase protein [Streptococcus
thermophilus MN-ZLW-002]
gi|312278265|gb|ADQ62922.1| SRP54, signal recognition particle GTPase protein, putative
[Streptococcus thermophilus ND03]
gi|387574726|gb|AFJ83432.1| SRP54, signal recognition particle GTPase protein, putative
[Streptococcus thermophilus MN-ZLW-002]
Length = 520
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/407 (48%), Positives = 283/407 (69%), Gaps = 7/407 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + QQ++KIV +EL +++G E S
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDASQQIIKIVNEELTEILGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I + GLE+A+ D V++DTAGRLQID+ +M EL+D+K
Sbjct: 153 GQQINVPVFDMGTETPAVEIVRNGLEQARANKNDYVLIDTAGRLQIDETLMKELRDIKDF 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 AHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVLSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVME 404
+LL +P RR+R+A SG T +V++ + Q + M+ +M G ME
Sbjct: 392 DLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQGIMSGDME 436
>gi|404485667|ref|ZP_11020864.1| signal recognition particle protein [Barnesiella intestinihominis
YIT 11860]
gi|404338355|gb|EJZ64802.1| signal recognition particle protein [Barnesiella intestinihominis
YIT 11860]
Length = 440
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/398 (50%), Positives = 279/398 (70%), Gaps = 5/398 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V ++F V +A+G ++ V+P Q +VKIV DEL LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKQFTDTVKTKALGQDVLTAVKPGQLMVKIVHDELATLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ +++ P++IL++GLQG GKTT S KLA LK K+GK +LVA DVYRPAAI+QL +
Sbjct: 91 AEVNLSQN-PSIILMSGLQGSGKTTFSGKLAKMLKSKKGKRPLLVACDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+ VPVYT P I+ ++ AK+ + D+VIVDTAGRL ID+ MM+E++ +K+
Sbjct: 150 LGEQIDVPVYTEEDSKDPVSISANAVKYAKENHFDLVIVDTAGRLAIDEQMMNEIEAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NPTE L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 KINPTETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVDKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++E ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLEAIDYFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP+ER PE
Sbjct: 330 NDFLSQIHQIKKMGNLKDLASMIPGVGKAIK-DMDIDDNAFKSIEAIIYSMTPKERSNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
LL S RR+R+A SG + Q+V++L+ Q Q R M+
Sbjct: 389 LLNGS--RRQRIAAGSGTSIQEVNRLIKQFDQTRKMMR 424
>gi|373462521|ref|ZP_09554240.1| signal recognition particle protein [Prevotella maculosa OT 289]
gi|371948085|gb|EHO65975.1| signal recognition particle protein [Prevotella maculosa OT 289]
Length = 449
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/432 (48%), Positives = 287/432 (66%), Gaps = 14/432 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F +V ++A+G+ ++ V+P Q LVK+V DEL LMGG+
Sbjct: 31 LKDVRRALLDADVNFKVAKTFTDSVKQKAMGMNVLTAVKPGQLLVKVVHDELADLMGGDT 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+EL + RP VIL++GLQG GKTT S KLAN LK K+ + +LVA DVYRPAAI QL +
Sbjct: 91 AELKL-EGRPAVILMSGLQGSGKTTFSGKLANLLKNKKNRKPLLVACDVYRPAAIAQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+GVPVY+ IA+ + EAK K DVVIVDTAGRL +D+ MM E+ ++K
Sbjct: 150 VGEQIGVPVYSEPDSKDVVAIAEGAVREAKAKGYDVVIVDTAGRLAVDEEMMIEISNLKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
L+P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 SLHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKMEAIDVFHPARMADRILGMGDIVSLVERAQEQFDEEEAKRLQKKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFLGQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFKGIEAIIKSMTPKERTSPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALK 419
+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G + + +
Sbjct: 389 ILNTS--RRQRIAKGSGTNIQEVNKLIKQFDQTRKMMKTITGNQMAGMMSRMKGMN---- 442
Query: 420 SEQKAPPGTARR 431
PG A+R
Sbjct: 443 -----IPGMAKR 449
>gi|450088635|ref|ZP_21854871.1| signal recognition particle protein [Streptococcus mutans NV1996]
gi|449216367|gb|EMC16492.1| signal recognition particle protein [Streptococcus mutans NV1996]
Length = 516
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM + + V+ E + A++ +MTPEERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVSSMTPEERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 393 LL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|153954026|ref|YP_001394791.1| hypothetical protein CKL_1401 [Clostridium kluyveri DSM 555]
gi|219854640|ref|YP_002471762.1| hypothetical protein CKR_1297 [Clostridium kluyveri NBRC 12016]
gi|146346907|gb|EDK33443.1| Hypothetical protein CKL_1401 [Clostridium kluyveri DSM 555]
gi|219568364|dbj|BAH06348.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 449
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/407 (46%), Positives = 288/407 (70%), Gaps = 2/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VVR FV++VSE+ +G +++ + P QQ++KIV +EL LMG
Sbjct: 32 MREVKLALLEADVNYKVVRNFVKSVSEKCLGEEVLKSLTPAQQVIKIVNEELTSLMGNSE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S + ++ T+I+L GLQG GKTT+ KLA L+K+ K +LVA D+YRPAAI QL I+
Sbjct: 92 SSIEYSPDGLTIIMLVGLQGSGKTTMCGKLALQLRKKNKKPLLVACDIYRPAAIKQLQIV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV++ G +V+ I K + AK ++V+I+DTAGRLQID+ +MDELK +K
Sbjct: 152 GKQIDIPVFSMGDKVEAVDICKGAVTYAKDNKLNVIIIDTAGRLQIDEELMDELKQIKEN 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+LLVVD+MTGQ+A + ++FN ++ I G +LTKLDGD+RGGAALS++ ++GKPIK
Sbjct: 212 INPQEILLVVDSMTGQDAVNVASSFNEQLNINGVVLTKLDGDTRGGAALSIRAITGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M DLE FYPDRMA RILGMGDVLS +EKAQ+ + +E+A+++ ++++ F+F
Sbjct: 272 FVGMGEKMNDLEVFYPDRMASRILGMGDVLSLIEKAQQSIDEEEAKKLGDRMLNKEFNFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPG--MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL ++G +S++I M+PG M ++ + EK + +EA+I +MT +ER KP
Sbjct: 332 DFLALMAQTKKLGPISKLIEMVPGVNMKELKGVDLSRGEKEMVKIEAIINSMTLKERRKP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+++ S R+KR+A SG Q V++L+ +++ MK G+ +G
Sbjct: 392 SIVSGSSSRKKRIAAGSGTNIQTVNKLLKDFEKIKKTMKQFNGMKKG 438
>gi|399923725|ref|ZP_10781083.1| signal recognition particle protein [Peptoniphilus rhinitidis 1-13]
Length = 445
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/399 (49%), Positives = 275/399 (68%), Gaps = 3/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ FV+ V E+A+G ++ + P QQ++KIV +EL LMG
Sbjct: 32 MREVKLALLEADVNFKVVKDFVKTVKERALGKEVLESLTPGQQVIKIVNEELTNLMGTNE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+L +K + TVI++ GLQG GKTT S KLAN LKK GK +LVA DVYRPAAI QL ++
Sbjct: 92 VKLDLSK-KTTVIMMCGLQGAGKTTTSGKLANKLKKDGKRPLLVACDVYRPAAIKQLQVV 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+ V PV+T G ++ P I+K LE AKK DVVI+DTAGRL ID+ +M EL+D+
Sbjct: 151 GKSVDTPVFTMGDKISPVDISKAALEHAKKNGNDVVIIDTAGRLHIDEKLMKELQDIHEE 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP+EVLLV+DAMTGQ+A + TF+ + +TG ILTKLDGD+RGGAALS++ V+ PIK
Sbjct: 211 INPSEVLLVLDAMTGQDAVNVADTFDDMLKLTGVILTKLDGDARGGAALSIRSVTDVPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+ GE+M+++E F+PDRMA RILGMGDVLS +EKAQ + + A+E+++K+ + F F
Sbjct: 271 FIASGEKMDNIEVFHPDRMASRILGMGDVLSLIEKAQNAVDDKKAKELEEKLRKSTFTFE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + MG + +IGMIPG+ + E +EA+I +MT +ER KPE+
Sbjct: 331 DFLDQMQQMKNMGPLEDIIGMIPGVDNKALKNINLPENEFAKVEAIILSMTKKERLKPEI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S RRKR+A+ SG + V++L+ Q MR MK
Sbjct: 391 IDSS--RRKRIAKGSGTSPADVNKLIKQFKDMRKMMKQF 427
>gi|317121794|ref|YP_004101797.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter marianensis DSM 12885]
gi|315591774|gb|ADU51070.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter marianensis DSM 12885]
Length = 445
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/415 (49%), Positives = 293/415 (70%), Gaps = 6/415 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV VV+ F+ V ++AVG ++ + P QQ++KIV DEL +LMGG+
Sbjct: 32 LREVRLALLEADVHFKVVKDFIARVRQRAVGQEVLESLTPAQQVIKIVHDELTQLMGGQQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L + P ++L GLQG GKTT +AKLA L +QG+ +LVA DVYRPAA++QLV L
Sbjct: 92 ARLDLGGAPPVPVMLVGLQGSGKTTTAAKLARLLARQGRQPLLVAADVYRPAAVEQLVTL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV+ GT+ P IA++G+ EA+++ DVVI+DTAGRL ID A+M+EL+ +++
Sbjct: 152 GQQIQLPVHAPGTDRDPVDIAREGVAEARRRGRDVVIIDTAGRLHIDDALMEELERIRQA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + TF+ +GI G +LTKLDGD+RGGAALSV+ V+G+PIK
Sbjct: 212 VAPREILLVVDAMTGQDAVNVAETFHRRLGIDGVVLTKLDGDARGGAALSVRAVTGRPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GER++ LEPF+P+RMA RILGMGDVLS +EKAQ + A+ +++K+ FD
Sbjct: 272 FVGLGERVDQLEPFHPERMASRILGMGDVLSLIEKAQAAFDAQQAQRLERKLREQTFDLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q R V +MG + +++ MIPG+G ++ V E E L+ +EA+I++MTPEER PE
Sbjct: 332 DFLEQLRQVRKMGPLDQLLAMIPGLGPRLKDVTVDEGE--LRRIEAIIQSMTPEERRHPE 389
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
++ S RR+R+A+ SG Q V++L+ Q + + MK + G G L NL
Sbjct: 390 IINAS--RRRRIARGSGTRVQDVNRLLKQFAETQRLMKQVTGAARRGR-RGLGNL 441
>gi|227513457|ref|ZP_03943506.1| signal recognition particle protein Ffh [Lactobacillus buchneri
ATCC 11577]
gi|227524600|ref|ZP_03954649.1| signal recognition particle protein Ffh [Lactobacillus hilgardii
ATCC 8290]
gi|227083330|gb|EEI18642.1| signal recognition particle protein Ffh [Lactobacillus buchneri
ATCC 11577]
gi|227088275|gb|EEI23587.1| signal recognition particle protein Ffh [Lactobacillus hilgardii
ATCC 8290]
Length = 478
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/417 (50%), Positives = 295/417 (70%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VVR FV+ V E+A G ++ G+ P QQ+VKIV +EL K MG E
Sbjct: 32 MREIRLALLEADVNFQVVRTFVKTVEERAKGAKVLEGLNPSQQIVKIVDEELTKTMGQEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L ++ PTVI+++GLQG GKTT KLA LK +Q +L+A DVYRPAAI+QL
Sbjct: 92 VPLNKSEKIPTVIMMSGLQGAGKTTTVGKLALKLKNEQNARPLLIADDVYRPAAIEQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+QV VPV+ GT+V P +IAK+GLE+AK+ + D VI+DTAGRLQID+ +MDEL ++K+
Sbjct: 152 VGQQVDVPVFQLGTDVDPVEIAKRGLEKAKEDHNDYVIIDTAGRLQIDEKLMDELGNIKK 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+LLV+DAMTGQ A A F+ + +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 AVNPDEILLVIDAMTGQNAVATAEGFDKTLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+MEDL+ F+PDRMA RILGMGD+LS +EK Q+ Q+ AEE+ +KI FDF
Sbjct: 272 KFVGQGEKMEDLDVFHPDRMASRILGMGDMLSLIEKTQKEYDQKQAEELSEKIKENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q + +MG + ++ MIPGM PA V K + ++A+I +MT +ER
Sbjct: 332 NDFLDQLDQIQKMGPLDEIMKMIPGMAN-NPALQNVNMNPKDMDHLKAIIYSMTEQERTD 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+++ +P RR+R+++ SG+ Q+V++++ Q Q MK +M + G++ + N+
Sbjct: 391 PDVM--NPSRRRRISRGSGRPIQEVNRMIKQFGQ----MKTMMNKVSKGNMSGMENM 441
>gi|422846642|ref|ZP_16893325.1| signal recognition particle protein [Streptococcus sanguinis SK72]
gi|325687450|gb|EGD29471.1| signal recognition particle protein [Streptococcus sanguinis SK72]
Length = 524
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/407 (48%), Positives = 284/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
+++ + PT+I++ GLQG GKTT + KL N LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 DIIKSPKIPTIIMMVGLQGAGKTTFAGKLTNKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ +IPGM PA ++ EK + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLLKLIPGMAN-NPALKNIKVDEKEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL SP RR+R+A SG + V++ + Q + M+ GV+ G
Sbjct: 392 DLL--SPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|397649721|ref|YP_006490248.1| signal recognition particle protein [Streptococcus mutans GS-5]
gi|392603290|gb|AFM81454.1| signal recognition particle protein [Streptococcus mutans GS-5]
Length = 516
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/407 (47%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q + MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQIQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|449960337|ref|ZP_21810595.1| signal recognition particle protein [Streptococcus mutans 4VF1]
gi|450137749|ref|ZP_21871799.1| signal recognition particle protein [Streptococcus mutans NLML1]
gi|449167693|gb|EMB70560.1| signal recognition particle protein [Streptococcus mutans 4VF1]
gi|449234787|gb|EMC33774.1| signal recognition particle protein [Streptococcus mutans NLML1]
Length = 516
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEDEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|374376095|ref|ZP_09633753.1| signal recognition particle protein [Niabella soli DSM 19437]
gi|373232935|gb|EHP52730.1| signal recognition particle protein [Niabella soli DSM 19437]
Length = 446
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 278/402 (69%), Gaps = 9/402 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++IRRAL++ADV+ + + F + E+A G ++ + P Q +VKIV+DEL +LMGGE
Sbjct: 31 IKEIRRALVDADVNYKIAKEFTDKIREKATGEKVLNAISPGQLMVKIVKDELTELMGGE- 89
Query: 61 SELVF-AKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLV 118
E VF AK P VIL+AGLQG GKTT S KLANYLK K+G S +LVA D+YRPAA++QL
Sbjct: 90 -EAVFNAKGNPAVILIAGLQGSGKTTFSGKLANYLKSKKGLSPLLVAADIYRPAAMEQLR 148
Query: 119 ILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVK 178
+LGEQ+GV VY IAK + E+K +N +V+I+DTAGRL +D+ MM E+ D+K
Sbjct: 149 VLGEQIGVEVYIEPENKDAVSIAKNAIAESKSRNKNVIIIDTAGRLAVDEQMMTEVADIK 208
Query: 179 RVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKP 238
+NP E+L VVD+MTGQ+A FN + +G +LTKLDGD+RGGAALS+K KP
Sbjct: 209 NAVNPQEILFVVDSMTGQDAVNTAKAFNERLDFSGVVLTKLDGDTRGGAALSIKYTVNKP 268
Query: 239 IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 298
IK V GE+M+ L+ FYP+RMA RILGMGD+ + VE+AQ+ +E A++++ KI FD
Sbjct: 269 IKFVSNGEKMDALDVFYPERMAQRILGMGDITTLVERAQQQFDEEQAKKLESKIRKNKFD 328
Query: 299 FNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEEREK 357
F DF Q + +MG+M ++GMIPG+G KI + +++S K +EAMI++MTPEER
Sbjct: 329 FADFKAQLDQIKKMGNMKDLLGMIPGVGAKIKDLDI--SDESFKGIEAMIDSMTPEERSN 386
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
P+++ S RRKR+A SGK +V+ + Q QMR MKN+
Sbjct: 387 PDIINGS--RRKRIATGSGKDIAEVNAFMKQFEQMRDMMKNM 426
>gi|449937443|ref|ZP_21804559.1| signal recognition particle protein [Streptococcus mutans 2ST1]
gi|450077600|ref|ZP_21850546.1| signal recognition particle protein [Streptococcus mutans N3209]
gi|450154315|ref|ZP_21877665.1| signal recognition particle protein [Streptococcus mutans 21]
gi|449164238|gb|EMB67305.1| signal recognition particle protein [Streptococcus mutans 2ST1]
gi|449211007|gb|EMC11429.1| signal recognition particle protein [Streptococcus mutans N3209]
gi|449237922|gb|EMC36717.1| signal recognition particle protein [Streptococcus mutans 21]
Length = 512
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|170017639|ref|YP_001728558.1| Signal recognition particle protein [Leuconostoc citreum KM20]
gi|169804496|gb|ACA83114.1| Signal recognition particle protein [Leuconostoc citreum KM20]
Length = 491
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/417 (49%), Positives = 277/417 (66%), Gaps = 13/417 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ V++FV V E+A G ++ G+ P QQ+VKIV DEL MG E
Sbjct: 32 MREIRLALLEADVNYETVKKFVANVREKASGADILEGLNPAQQVVKIVNDELTATMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L + PTVI++AGLQG GKTT AKLA LK +Q +L+A DVYRPAAIDQL I
Sbjct: 92 VPLNKSPKIPTVIMMAGLQGAGKTTTVAKLAYKLKSEQHARPLLIAADVYRPAAIDQLEI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG +G+PV+ GT++ P I +QGL EA K D V +DTAGRLQID+ +M ELKD+
Sbjct: 152 LGRDLGIPVFQLGTDINPRDIVRQGLAEAHKNKNDYVFIDTAGRLQIDETLMQELKDIAD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LL VDAMTGQ AA F+ + +TG +LTKLD D+RGGAALS+++V+GKPI
Sbjct: 212 IASPDEILLTVDAMTGQNAAETAKGFSAALDLTGVVLTKLDADTRGGAALSIRDVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E + +K+ FDF
Sbjct: 272 KFIGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEAQAKQLEKMRQNTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q + V +MG M ++ MIPGM P A V K +EA++ +MTP ERE
Sbjct: 332 NDFVAQLKQVQKMGPMEDLLKMIPGMAN-NPALANVNIDAKQFSHLEAIVSSMTPAEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGV--MEGGS 407
P+L+ +P RR+R+A +G+ +V++++ Q QMR M N G+ M GGS
Sbjct: 391 PDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMNQATNGNFGGLDKMMGGS 445
>gi|295696070|ref|YP_003589308.1| signal recognition particle protein [Kyrpidia tusciae DSM 2912]
gi|295411672|gb|ADG06164.1| signal recognition particle protein [Kyrpidia tusciae DSM 2912]
Length = 445
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/403 (49%), Positives = 283/403 (70%), Gaps = 4/403 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M+++RRALL ADV+ VVR FV V E+AVG +++ + P QQ++KIV DEL L+GG+
Sbjct: 33 MKEVRRALLAADVNFTVVRDFVARVRERAVGQEVMKSLTPAQQVIKIVHDELTALLGGKP 92
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L + RP V++L GLQG GKTT + KLA +++KQG+ +LVA DVYRPAA+ QL L
Sbjct: 93 STLNLS-GRPAVVMLVGLQGAGKTTTAGKLAQWVRKQGRRPLLVAADVYRPAAVRQLQTL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE + VPV++ + P +I+K LE A ++ DVV+VDTAGRL +D A+M+EL+ +K
Sbjct: 152 GEALKVPVFSVDGDADPVEISKSSLERASQEGCDVVLVDTAGRLHVDDALMEELERMKAA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ A + F+ +G+TGAI TKLDGD++GGAALS+ V+G PIK
Sbjct: 212 VVPGEILLVVDAMTGQSAVEVAEAFHGRLGLTGAIFTKLDGDTKGGAALSILSVAGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++ LEPFYPDRMA RILGMGDVL+ +EKAQ+ + E A+++++++ + F
Sbjct: 272 FAGVGEKLDALEPFYPDRMASRILGMGDVLTLIEKAQQTVDAEKAKQLERQLRAGEFSLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL Q R V ++G + +++GM+PGM KI ++ E+ L +EA+I +MTPEER +PE
Sbjct: 332 DFLDQLRQVRKLGPLDQLLGMLPGMNKIKGLGNLQVDERQLGRVEAIILSMTPEERRRPE 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
L+ S RR+R+A SG + V +L+ Q +MR MK G+
Sbjct: 392 LIDAS--RRRRIASGSGTRVEDVGRLLKQFKEMRKMMKQFSGM 432
>gi|450034650|ref|ZP_21834504.1| signal recognition particle protein [Streptococcus mutans M21]
gi|449196176|gb|EMB97461.1| signal recognition particle protein [Streptococcus mutans M21]
Length = 516
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|225018488|ref|ZP_03707680.1| hypothetical protein CLOSTMETH_02435 [Clostridium methylpentosum
DSM 5476]
gi|224948689|gb|EEG29898.1| hypothetical protein CLOSTMETH_02435 [Clostridium methylpentosum
DSM 5476]
Length = 453
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 279/400 (69%), Gaps = 6/400 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ FV VSE++VG ++ + P QQ++KIV +EL LMG E
Sbjct: 32 MREVKLALLEADVNYKVVKDFVAKVSERSVGSDVLESLTPAQQVIKIVNEELCSLMGSEH 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ + F P VI++ GLQG GKTT SAKLA Y K QG +LVA DVYRPAAI QL ++
Sbjct: 92 TRIEFPSKPPCVIMMCGLQGSGKTTHSAKLAKYFKSQGHRPLLVACDVYRPAAIQQLKVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE+ G V+ G P +IAK+ L+ AK D+VI+DTAGRL ID+ +M+ELK++K
Sbjct: 152 GEKAGASVFEMGN-TDPVEIAKEALKHAKDYGNDLVILDTAGRLHIDEQLMNELKNIKAE 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+LLVVD+MTGQ+A + +FN + I G ILTKLDGD+RGGAALSV V+GKP+K
Sbjct: 211 VNPNEILLVVDSMTGQDAVNVAKSFNETLEIDGVILTKLDGDTRGGAALSVLAVTGKPVK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++DLEPF+P+RMA RILGMGDVL+ +EKA E + +++A M KK+ FD N
Sbjct: 271 FAGIGEKLDDLEPFHPERMASRILGMGDVLTLIEKAGENVSEKEAARMAKKLKENKFDMN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
D L Q + + +MGS+ ++ +IPG+G KI A + E++ + +EA+I +MT EREKP
Sbjct: 331 DLLDQMKQIQKMGSIKSILSIIPGVGEKIKDADIDESQ--MTRIEAIITSMTIAEREKPS 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ +P R++R+A SG Q V++L+ Q M+ MK L
Sbjct: 389 II--NPSRKRRIAAGSGTQVQDVNRLLKQFEDMQKMMKQL 426
>gi|288905279|ref|YP_003430501.1| signal recognition particle protein [Streptococcus gallolyticus
UCN34]
gi|288732005|emb|CBI13570.1| signal recognition particle protein [Streptococcus gallolyticus
UCN34]
Length = 521
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL +++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDPTQQIVKIVNEELTEILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
EL + PT+I++ GLQG GKTT + KLAN L K + +++A D+YRPAAIDQL L
Sbjct: 93 ELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKDENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GNQINVPVFDMGTDHSAVEIVTNGLAQAKENHNDYVIIDTAGRLQIDEKLMEELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA + EK++ A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIVLSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|450052707|ref|ZP_21841379.1| signal recognition particle protein [Streptococcus mutans NFSM1]
gi|56968646|gb|AAW32279.1| Ffh [Streptococcus mutans]
gi|449200130|gb|EMC01176.1| signal recognition particle protein [Streptococcus mutans NFSM1]
Length = 516
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIVMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|55820929|ref|YP_139371.1| signal recognition particle [Streptococcus thermophilus LMG 18311]
gi|55822851|ref|YP_141292.1| signal recognition particle protein [Streptococcus thermophilus
CNRZ1066]
gi|116627717|ref|YP_820336.1| signal recognition particle [Streptococcus thermophilus LMD-9]
gi|55736914|gb|AAV60556.1| signal recognition particle [Streptococcus thermophilus LMG 18311]
gi|55738836|gb|AAV62477.1| signal recognition particle [Streptococcus thermophilus CNRZ1066]
gi|116100994|gb|ABJ66140.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Streptococcus thermophilus LMD-9]
Length = 520
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/407 (48%), Positives = 283/407 (69%), Gaps = 7/407 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + QQ++KIV +EL +++G E S
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDASQQIIKIVNEELTEILGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I + GLE+A+ D V++DTAGRLQID+ +M EL+D+K
Sbjct: 153 GQQINVPVFDMGTETPAVEIVRNGLEQARANKNDYVLIDTAGRLQIDETLMKELRDIKDF 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 AHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVLSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVME 404
+LL +P RR+R+A SG T +V++ + Q + M+ +M G ME
Sbjct: 392 DLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQGIMSGDME 436
>gi|258511333|ref|YP_003184767.1| signal recognition particle protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478059|gb|ACV58378.1| signal recognition particle protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 479
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/405 (50%), Positives = 285/405 (70%), Gaps = 10/405 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IRRALL ADV++ VVR FV V +AVG +++ + P QQ+VKIV +EL +LMGG
Sbjct: 31 MREIRRALLAADVNVKVVRDFVDRVRARAVGQDVLKSLTPGQQVVKIVYEELTELMGGSQ 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ + A PTV++L GLQG GKTT +AKLA +Q +LVA DVYRPAA+DQL +L
Sbjct: 91 ARIRMAPKPPTVVMLVGLQGAGKTTTAAKLALAFHQQNHRPLLVAADVYRPAAVDQLKVL 150
Query: 121 GEQVGVPVYT---AGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDV 177
G Q+ VPV++ AG +IA+ GL +A+++ DVVIVDTAGRL ID A+M EL+ +
Sbjct: 151 GAQIDVPVFSLDGAGA----VEIAEAGLRDAERRGADVVIVDTAGRLHIDDALMAELESM 206
Query: 178 KRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGK 237
K++L P E+LLVVDAMTGQ+A + F+ + +TG ILTKLDGD+RGGAAL+V+ +G
Sbjct: 207 KKILEPHEILLVVDAMTGQDAVHVAEAFHQRLEVTGVILTKLDGDARGGAALTVRAATGC 266
Query: 238 PIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANF 297
PIK VG GE++E LEPF+P+RMA RILGMGDVLS +E+AQE + E A+EM+ ++ SANF
Sbjct: 267 PIKFVGMGEKIEPLEPFHPERMASRILGMGDVLSLIERAQERIDLEKAKEMEARMRSANF 326
Query: 298 DFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-AEKSLKIMEAMIEAMTPEERE 356
+DF + R V +G + +++ M+PGM ++ + + ++ + +EA+I +MTPEER
Sbjct: 327 TLDDFQEMFRQVRNLGPLDQILKMLPGMNRVKGLENLDLNDRRFRRLEAIISSMTPEERR 386
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
P +L S RR+R+A SG T + V+QL+ Q Q+R MK+L G
Sbjct: 387 DPSILNAS--RRRRIANGSGTTVRDVNQLINQFEQVREMMKHLTG 429
>gi|375011584|ref|YP_004988572.1| signal recognition particle protein [Owenweeksia hongkongensis DSM
17368]
gi|359347508|gb|AEV31927.1| signal recognition particle protein [Owenweeksia hongkongensis DSM
17368]
Length = 449
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/393 (51%), Positives = 276/393 (70%), Gaps = 5/393 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++IRRAL++ADVS + + + E+A+G ++ ++P Q + KIVRDE+ +LMGG V
Sbjct: 31 VKEIRRALVDADVSYKIAKEVTGRIKEEALGQKVLTSLQPGQLMTKIVRDEIARLMGGSV 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ KS P+VIL+AGLQG GKTT S KLAN+LK K+ K +LVA DVYRPAAI+QL +
Sbjct: 91 AEMDL-KSSPSVILMAGLQGSGKTTHSGKLANFLKRKKTKKPLLVACDVYRPAAINQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+GV VY+ P IA + AK +VVIVDTAGRL ID+AMM E++DV
Sbjct: 150 VGEQIGVEVYSEEGNNNPVSIATNAVAHAKANGFNVVIVDTAGRLAIDQAMMTEIRDVHA 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAAL+++ V KPI
Sbjct: 210 AIKPDETLFVVDSMTGQDAVNTAKAFNDVLDYEGVILTKLDGDTRGGAALTIRTVVEKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+M+ L+ FYP+RMA RILGMGDV+S VE+AQE +++A +QKKI S FDF
Sbjct: 270 KFIGTGEKMDALDVFYPERMADRILGMGDVVSLVERAQEQFDEDEARRVQKKIASNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + + +MG++ ++GMIPGMGK+ + + + K +EA+I +MTP ERE P+
Sbjct: 330 NDFLGQIKQIKKMGNVKDLMGMIPGMGKMMK-NIDIDDDAFKGVEAIIHSMTPAEREDPK 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQM 392
L+ S RR+R+A+ SGKT Q V+QL+ Q M
Sbjct: 389 LINGS--RRQRIAKGSGKTIQDVNQLLKQFADM 419
>gi|329962381|ref|ZP_08300385.1| signal recognition particle protein [Bacteroides fluxus YIT 12057]
gi|328530104|gb|EGF56989.1| signal recognition particle protein [Bacteroides fluxus YIT 12057]
Length = 440
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/412 (48%), Positives = 280/412 (67%), Gaps = 5/412 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V +A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKNFTDTVKTKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ S+P VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 AEINI-DSKPAVILMSGLQGSGKTTFSGKLARMLKSKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y+ P +IA+ + EAK K D+VIVDTAGRL +D+ MM+E+ +K+
Sbjct: 150 LAEQIEVPMYSEPDSKDPVRIAQNAILEAKAKGYDLVIVDTAGRLAVDEEMMNEIAAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPSRMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEER P
Sbjct: 330 NDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEERSNPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G +P L
Sbjct: 389 ILNGS--RRQRIAKGSGTNIQEVNRLLKQFDQTRKMMKMVTGSKMGKMMPKL 438
>gi|449965794|ref|ZP_21812028.1| signal recognition particle protein [Streptococcus mutans 15VF2]
gi|449170924|gb|EMB73611.1| signal recognition particle protein [Streptococcus mutans 15VF2]
Length = 516
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|449882056|ref|ZP_21784753.1| signal recognition particle protein [Streptococcus mutans SA38]
gi|449924256|ref|ZP_21799534.1| signal recognition particle protein [Streptococcus mutans 4SM1]
gi|449163079|gb|EMB66194.1| signal recognition particle protein [Streptococcus mutans 4SM1]
gi|449250610|gb|EMC48663.1| signal recognition particle protein [Streptococcus mutans SA38]
Length = 516
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQIKVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|255524258|ref|ZP_05391217.1| signal recognition particle protein [Clostridium carboxidivorans
P7]
gi|296185380|ref|ZP_06853790.1| signal recognition particle protein [Clostridium carboxidivorans
P7]
gi|255512083|gb|EET88364.1| signal recognition particle protein [Clostridium carboxidivorans
P7]
gi|296050214|gb|EFG89638.1| signal recognition particle protein [Clostridium carboxidivorans
P7]
Length = 454
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/388 (48%), Positives = 281/388 (72%), Gaps = 2/388 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F++ VSE+ +G +++ + P QQ+VKIV DEL LMG
Sbjct: 32 MREVKLALLEADVNYKVVKDFIKKVSEKCLGEEVLKSLTPAQQVVKIVNDELSNLMGSTE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S + F+ S T+I+L GLQG GKTT++ KLA +K+ K +L A D+YRPAAI QL ++
Sbjct: 92 SGVQFSSSGLTMIMLVGLQGAGKTTMAGKLALQFRKKNKKPLLAACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G +V P I+K +E AK ++VVI+DTAGRL ID+ +M+ELKDVK
Sbjct: 152 GKQIDVPVFAMGDKVSPVDISKGAIEYAKNNGLNVVIIDTAGRLHIDEELMNELKDVKEN 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +FN ++ I+G ILTKLDGD+RGGAALS+K ++ KPIK
Sbjct: 212 VKPDEILLVVDAMTGQDAVNVANSFNDQLDISGVILTKLDGDTRGGAALSIKAMTDKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M D E F+PDRMA RILGMGDVLS +EKA++ + +E+A+++ ++MS F+
Sbjct: 272 FVGLGEKMSDFEVFHPDRMASRILGMGDVLSLIEKAKQSIDEEEAKKIGSRMMSQEFNLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL + + +MG M++++ M+PG+ ++ + +EK + +EA+I +MT +ER P
Sbjct: 332 DFLSSMKQIKKMGPMNKLLEMVPGLNTKELQGVDLSGSEKEMAKIEAIISSMTVKERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLV 386
L++ SP R+KR++Q SG T QQV++++
Sbjct: 392 SLVSGSPSRKKRISQGSGTTVQQVNKIL 419
>gi|237723193|ref|ZP_04553674.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293372708|ref|ZP_06619090.1| signal recognition particle protein [Bacteroides ovatus SD CMC 3f]
gi|229447715|gb|EEO53506.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292632517|gb|EFF51113.1| signal recognition particle protein [Bacteroides ovatus SD CMC 3f]
Length = 440
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/398 (49%), Positives = 275/398 (69%), Gaps = 5/398 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKIFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ +RP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 AEINI-DARPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+ +K+
Sbjct: 150 LAEQIEVPMYCELDSKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEIAAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPDEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++E ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLEAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP ER PE
Sbjct: 330 NDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAERSNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 389 ILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|450109576|ref|ZP_21861516.1| signal recognition particle protein [Streptococcus mutans SM6]
gi|449225932|gb|EMC25497.1| signal recognition particle protein [Streptococcus mutans SM6]
Length = 516
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|449994935|ref|ZP_21822829.1| signal recognition particle protein [Streptococcus mutans A9]
gi|450009858|ref|ZP_21828384.1| signal recognition particle protein [Streptococcus mutans A19]
gi|450023214|ref|ZP_21830478.1| signal recognition particle protein [Streptococcus mutans U138]
gi|450116481|ref|ZP_21864528.1| signal recognition particle protein [Streptococcus mutans ST1]
gi|449184857|gb|EMB86770.1| signal recognition particle protein [Streptococcus mutans A9]
gi|449190757|gb|EMB92311.1| signal recognition particle protein [Streptococcus mutans A19]
gi|449193916|gb|EMB95286.1| signal recognition particle protein [Streptococcus mutans U138]
gi|449226962|gb|EMC26427.1| signal recognition particle protein [Streptococcus mutans ST1]
Length = 516
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|429741355|ref|ZP_19275017.1| signal recognition particle protein [Porphyromonas catoniae F0037]
gi|429159004|gb|EKY01528.1| signal recognition particle protein [Porphyromonas catoniae F0037]
Length = 447
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/415 (48%), Positives = 283/415 (68%), Gaps = 6/415 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALLEADV+ V ++F + V E+A+G ++ VRP + +VKIV DEL +LMG +
Sbjct: 31 LKDVRRALLEADVNYNVAKKFTEEVKEKALGQNVLTAVRPGELMVKIVHDELAQLMGSKA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ K P +IL++GLQG GKTT S KLA+ LK KQ K +LVA DVYRPAAI+QL +
Sbjct: 91 TEINL-KGTPAIILMSGLQGSGKTTFSGKLAHLLKTKQSKKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VPVY P IA++G+ EA + DVVI+DTAGRL ID+ MM E++ VK
Sbjct: 150 LAEQIAVPVYFDLESKDPVSIARRGVAEAMTQGCDVVIIDTAGRLAIDEEMMHEIQAVKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P+E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AIRPSETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVDKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ L+ F+P+RMA RILGMGD++S VE+AQ++ +++A ++++I FDF
Sbjct: 270 KFVGMGEKMDALDVFHPERMADRILGMGDIVSLVERAQQLYDEQEARRLEERIAKDQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEER KP
Sbjct: 330 NDFLTQIHQIKKMGNIKDLAAMIPGVGKAL-KDIDINDDAFKSIEAIIYSMTPEERAKPH 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+L RRKR+A SG T Q V++L+ Q Q R MK L G +GG +P + ++
Sbjct: 389 ILDGH--RRKRIALGSGTTVQDVNKLLTQFTQTRKMMKTLQG-FKGGKMPKIPSM 440
>gi|148655435|ref|YP_001275640.1| signal recognition particle protein [Roseiflexus sp. RS-1]
gi|148567545|gb|ABQ89690.1| signal recognition particle subunit FFH/SRP54 (srp54) [Roseiflexus
sp. RS-1]
Length = 444
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/411 (49%), Positives = 290/411 (70%), Gaps = 7/411 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M+ +R ALLEADV+L VVR FV V+E+A+G + + + P QQ++KIV EL+ L+G
Sbjct: 31 MKQVRIALLEADVNLKVVRDFVARVTEKAIGEEVAKSLTPVQQVIKIVHQELIDLLGQAN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A+ PTVI+L GLQG GKTT +AKLA +L+K+GK +LVA D+YRPAAI QL L
Sbjct: 91 VPLAEARPGPTVIMLIGLQGSGKTTTAAKLALWLRKKGKRPLLVAADIYRPAAITQLESL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+G+PV+ GT+V P +IA+ L A+ +N+ VI+DTAGRLQID+ +M EL+ +
Sbjct: 151 GRQLGIPVHAEGTQVSPPEIARHALRRARDENLTHVIIDTAGRLQIDEPLMAELEQINAA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P E LLVVDAM GQEA + FN +G+TG I TK+DGD+RGGAALSV+ V+G PIK
Sbjct: 211 VDPVERLLVVDAMIGQEAVRVAEEFNRRVGLTGVIFTKVDGDARGGAALSVRAVTGVPIK 270
Query: 241 LVGRGERME--DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 298
+G GE++E +EPF+PDR+A RILGMGDVLS +E+A+ + +E A +MQKK++ +FD
Sbjct: 271 FLGSGEKVEASTIEPFHPDRLASRILGMGDVLSLIERAEAIYDEEQARKMQKKLVKGSFD 330
Query: 299 FNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
F DFL + + ++G + +++GMIPG+ K+ ++ EK LK +EA+I +MT EER P
Sbjct: 331 FEDFLVSMQQMRKLGPLQQILGMIPGLDKLAREEII-TEKDLKKIEAIIFSMTKEERRNP 389
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 409
+L+ R++R+A+ SG Q+V+QLV Q QM+ MK + G +GG P
Sbjct: 390 DLIKGR--RKERIARGSGTQVQEVTQLVNQFRQMQRMMKRMGG--KGGIDP 436
>gi|65321173|ref|ZP_00394132.1| COG0541: Signal recognition particle GTPase [Bacillus anthracis
str. A2012]
Length = 464
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/390 (50%), Positives = 285/390 (73%), Gaps = 8/390 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKRVSERAVGQDVMKSLTPGQQVIKVVQEELTELMGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTVI++ GLQG GKTT + KLAN L KK + MLVA D+YRPAAI QL
Sbjct: 92 SKIAIANKPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+ + D V++DTAG L ID+ +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVLIDTAGHLHIDEELMDELAKVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +F+ ++G+TG +LTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEEKAKELEQKMRTLSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKI---TPAQVREAEKSLKIMEAMIEAMTPEERE 356
+DFL+Q V ++G + ++GM+PG KI AQV EK + +EA+I +MT ERE
Sbjct: 332 DDFLEQLGQVRQLGPLDELLGMLPGANKIKGLKNAQVD--EKQIGHIEAIIRSMTKLERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLV 386
+PE++ S R+KR+A+ SG T Q++++L+
Sbjct: 390 QPEIINAS--RKKRIAKGSGTTVQKINRLI 417
>gi|449891169|ref|ZP_21787773.1| signal recognition particle protein [Streptococcus mutans SF12]
gi|449256864|gb|EMC54676.1| signal recognition particle protein [Streptococcus mutans SF12]
Length = 516
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMIGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|449015603|dbj|BAM79005.1| signal recognition particle SRP54 homolog ffh [Cyanidioschyzon
merolae strain 10D]
Length = 608
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/429 (47%), Positives = 295/429 (68%), Gaps = 23/429 (5%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGE- 59
++++RRAL++ADV++ VV + A+ EQA+ + +++GV P QQ VKIV DEL++L+GG+
Sbjct: 121 LKEVRRALIDADVNVKVVDILLAAIKEQALNMKVVKGVTPGQQFVKIVYDELIRLLGGDP 180
Query: 60 -----------VSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL---KKQGKSCMLVA 105
+ L + ++PTVIL+AGLQG GKTT SAKLA L K+ K +LVA
Sbjct: 181 ATSSSKAGASPLPALAESPTKPTVILMAGLQGAGKTTQSAKLARLLQTEKRSRKKVLLVA 240
Query: 106 GDVYRPAAIDQLVILGEQ----VGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTA 161
DV RPAA++QL LG+Q V +P V ++A + L+ AK+K D +IVDTA
Sbjct: 241 ADVQRPAAVEQLQTLGQQIETEVFIPAMVGTGSVTALEVATRALDYAKQKAFDFMIVDTA 300
Query: 162 GRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDG 221
GR ID+ +M+EL+ +KRVL+P E+LLVVD M GQEAA + F+ IGITGAILTK+DG
Sbjct: 301 GRQVIDERLMEELQQIKRVLSPAEILLVVDGMIGQEAANITRAFHERIGITGAILTKMDG 360
Query: 222 DSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQ 281
D+RGGAALS+K++SG PIK +G GE+++ LE FYPDRMA RILGMGD+++ VE+AQE +
Sbjct: 361 DTRGGAALSIKQISGAPIKFIGVGEKLDKLEKFYPDRMASRILGMGDIITLVERAQEAVD 420
Query: 282 QEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSL 340
+++AE++ +K++ A FDFNDFL+QTR V MGS + V+ ++PG+ G + Q+R EK L
Sbjct: 421 EKEAEQLARKMLEARFDFNDFLRQTRFVRSMGSFAGVLKLLPGVSGMLKEDQLRAGEKRL 480
Query: 341 KIMEAMIEAMTPEEREKPELLA---ESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
++ E++I +MTP ER P+LL + R +R+A+ SG++ +QV L+ MR M
Sbjct: 481 RLAESVINSMTPRERANPDLLTVDKTAASRMRRIARGSGRSLEQVESLMRDFVNMRNVMA 540
Query: 398 NLMGVMEGG 406
+ M GG
Sbjct: 541 QMSRRMMGG 549
>gi|327313674|ref|YP_004329111.1| signal recognition particle protein [Prevotella denticola F0289]
gi|326946347|gb|AEA22232.1| signal recognition particle protein [Prevotella denticola F0289]
Length = 447
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/402 (49%), Positives = 279/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKI+ DEL +LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKSFTDTVKKKALGMNVLTAVKPGQLMVKIMHDELAELMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L +RP +IL++GLQG GKTT S KLAN LK K+ K +LVA DVYRPAAI+QL +
Sbjct: 91 VGLNLV-NRPAIILMSGLQGSGKTTFSGKLANMLKTKEHKHPLLVACDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGVPVY+ ++IA + EAK K DVVI+DTAGRL +D+ MM+E++ +K+
Sbjct: 150 VGEQVGVPVYSEPDNKTVNEIADHAIAEAKAKGNDVVIIDTAGRLAVDEDMMNEIESLKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 HVTPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFIGTGEKMEAVDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 389 VLNNS--RRQRIAKGSGTNLQEVNRLIKQFDQTRKMMKMVTG 428
>gi|384135024|ref|YP_005517738.1| signal recognition particle protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339289109|gb|AEJ43219.1| signal recognition particle protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 479
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/405 (50%), Positives = 286/405 (70%), Gaps = 10/405 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IRRALL ADV++ VVR FV V +AVG +++ + P QQ+VKIV +EL +LMGG
Sbjct: 31 MREIRRALLAADVNVKVVRDFVDRVRARAVGQDVLKSLTPGQQVVKIVYEELTELMGGSQ 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ + A PT+++L GLQG GKTT +AKLA ++Q +LVA DVYRPAA+DQL +L
Sbjct: 91 ARIRMASKPPTIVMLVGLQGAGKTTTAAKLALAFRQQSHRPLLVAADVYRPAAVDQLKVL 150
Query: 121 GEQVGVPVYT---AGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDV 177
GEQ+ VPV++ AG +IA+ L +A+++ DVVIVDTAGRL ID A+M EL+ +
Sbjct: 151 GEQIDVPVFSFDGAGA----VEIAQAALRDAERRGADVVIVDTAGRLHIDDALMGELEAM 206
Query: 178 KRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGK 237
K+VL P E+LLVVDAMTGQ+A + F+ + +TG ILTKLDGD+RGGAAL+V+ +G
Sbjct: 207 KKVLEPHEILLVVDAMTGQDAVHVAEAFHQRLEVTGVILTKLDGDARGGAALTVRAATGC 266
Query: 238 PIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANF 297
PIK VG GE++E LEPF+P+RMA RILGMGDVLS +E+AQE + E A+EM+ ++ SANF
Sbjct: 267 PIKFVGMGEKIEPLEPFHPERMASRILGMGDVLSLIERAQERIDLEKAKEMEARMRSANF 326
Query: 298 DFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE-AEKSLKIMEAMIEAMTPEERE 356
+DF + R V +G + +++ M+PGM ++ + + ++ + +EA+I +MTPEER
Sbjct: 327 TLDDFQEMFRQVRNLGPLDQILKMLPGMNRVKGLENLDLNDRRFRRLEAIISSMTPEERR 386
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
P +L S RR+R+A SG T + V+QL+ Q Q+R MK+L G
Sbjct: 387 DPGILNAS--RRRRIANGSGTTVRDVNQLINQFEQVREMMKHLTG 429
>gi|409098690|ref|ZP_11218714.1| signal recognition particle protein [Pedobacter agri PB92]
Length = 446
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/399 (49%), Positives = 273/399 (68%), Gaps = 4/399 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M++IR+ALL+ADV+ + F V ++A+G ++ V P Q L KI+ DEL LMGGEV
Sbjct: 31 MKEIRKALLDADVNYKTAKSFTDEVRQKALGQNVLTAVSPGQLLTKIMNDELAALMGGEV 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+EL K+ PT+IL+AGL G GKTT + KLA +LK +GK +LVAGD+YRPAA+DQL +L
Sbjct: 91 TELE-TKANPTIILIAGLNGAGKTTFAGKLALHLKGKGKKPLLVAGDMYRPAAVDQLEVL 149
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G VGV VY P IA +G+ K+ +V+I+DTAGRL ID+++M+E+ +VK
Sbjct: 150 GTSVGVSVYANRESNDPVGIALEGIAHGKQNGNNVIIIDTAGRLAIDESLMNEISEVKAK 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAALS+K V KPIK
Sbjct: 210 TQPHEILFVVDSMTGQDAVNTAKVFNDRLDFTGVVLTKLDGDTRGGAALSIKSVVNKPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ +++A E+QKKI FDFN
Sbjct: 270 FIGTGEKMEALDVFYPDRMASRILGMGDVVSLVERAQMQFDEKEAAELQKKIRKNKFDFN 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DF Q + + +MG+M ++GMIPG+GK+ V + + K +EA+I +MTP E+E P+
Sbjct: 330 DFYSQIQQIKKMGNMKDLMGMIPGVGKMMK-NVDIQDDAFKSIEAIINSMTPFEKENPDA 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ +S RR R+A+ SG ++V++L+ Q MR MK
Sbjct: 389 IQQS--RRLRIAKGSGSKVEEVTKLIKQFEDMRKMMKQF 425
>gi|429205348|ref|ZP_19196625.1| signal recognition particle protein [Lactobacillus saerimneri 30a]
gi|428146420|gb|EKW98659.1| signal recognition particle protein [Lactobacillus saerimneri 30a]
Length = 479
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/397 (50%), Positives = 280/397 (70%), Gaps = 8/397 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V +AVG ++ + P QQ+VKIV +EL+K+MG E
Sbjct: 32 MREIRLALLEADVNFKVVKDFVKQVRTRAVGSEVLESLTPAQQIVKIVNEELIKVMGDEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L +K PT+I++ GLQG GKTT ++KLA LK++ K+ +++A DVYRPAAI+QL I
Sbjct: 92 VPLNHSKKIPTIIMMVGLQGAGKTTTASKLAAKLKRENKARPLMIAADVYRPAAIEQLKI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG++ +PV+ GT+V P +I +QGL +A D V +DTAGRLQID+ +M EL ++
Sbjct: 152 LGKENDIPVFEMGTDVSPVEIVRQGLAQATANKNDYVFIDTAGRLQIDEKLMAELAQIEE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ A + FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LAQPDEILLTVDAMTGQNAVEVAQGFNDQLNITGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M+DL+ FYPDRMA RILGMGD+L+ +EKAQ E A+++++K+ FDF
Sbjct: 272 KFIGQGEKMDDLDVFYPDRMASRILGMGDMLTLIEKAQRDYDAEKAKKLEEKMRENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIME---AMIEAMTPEERE 356
NDFL Q + MGS+ +I MIPG+ PA ++ A K ME A++ +MT ERE
Sbjct: 332 NDFLDQMNQIQNMGSLQDIIKMIPGLAN-NPA-LKNANIDPKDMERTKAIVYSMTKAERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
P+LL +P RR+R+A SG+ Q+V++++ Q QMR
Sbjct: 390 NPDLL--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMR 424
>gi|227824776|ref|ZP_03989608.1| signal recognition particle protein [Acidaminococcus sp. D21]
gi|226905275|gb|EEH91193.1| signal recognition particle protein [Acidaminococcus sp. D21]
Length = 448
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/404 (48%), Positives = 281/404 (69%), Gaps = 4/404 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+RD+R ALLEADV+ VV+ F + E+ G + + Q +VK+V +EL+ L+GGE
Sbjct: 32 LRDVRLALLEADVNFKVVKEFTTKIKERVQGQKIDPNLTAGQYIVKVVHEELIALLGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L F+ + PTVI+LAGLQG GKTT KLANYL+K GK ++VAGDVYRPAAI QL ++
Sbjct: 92 SKLQFSSNPPTVIMLAGLQGAGKTTSIGKLANYLRKNGKKPLMVAGDVYRPAAITQLEVI 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+++ +PV++ G+EV P IA++ ++ A D V++DTAGRL ID+ +MDELK++K
Sbjct: 152 GKELDMPVFSMGSEVSPVTIAQEAIKRANALLCDTVLIDTAGRLHIDEKLMDELKNIKSA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P E+LLVVDAMTGQ+A + FN +GITG I+TKLDGD+RGGA LSVK V+ P+K
Sbjct: 212 VHPDEILLVVDAMTGQDAVTVAEAFNKALGITGLIVTKLDGDARGGAVLSVKSVADCPVK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++ L+PFYPDRMA RILGMGDVLS +EKAQE + + A+ + + + F +
Sbjct: 272 FVGMGEKLDALQPFYPDRMASRILGMGDVLSLIEKAQEAIDVDSAKRLAESMKHNEFTLD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
FL Q + V R+GS+ ++ MIPGMGK + V K ++ +EA+I +MTP+ER+ P
Sbjct: 332 MFLDQMKQVKRLGSLESILSMIPGMGKFSKQFEGVDLDGKEVRRLEAIITSMTPKERQNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
++ S RRKR+A G+ Q V++L+ Q + + MK + G+
Sbjct: 392 RIINGS--RRKRIAAGCGQRVQDVNRLLKQFEESKKLMKTMQGM 433
>gi|116618655|ref|YP_819026.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|116097502|gb|ABJ62653.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 491
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/409 (49%), Positives = 274/409 (66%), Gaps = 6/409 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ V++FV V E+A G ++ G+ P QQ+VKIV DEL MG E
Sbjct: 32 MREIRLALLEADVNYDTVKKFVANVREKASGTDIMEGLNPAQQIVKIVNDELTATMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PT+I++AGLQG GKTT AKLA LK + + +L+A D+YRPAAIDQL I
Sbjct: 92 VPLNKSPKIPTIIMMAGLQGAGKTTTVAKLAYKLKNENNARPLLIAADIYRPAAIDQLEI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG + +PV++ GT+V P I + GLE+A + D V +DTAGRLQID+ +M ELKD+
Sbjct: 152 LGRDLDIPVFSMGTDVNPRDIVRAGLEKAAENKNDYVFIDTAGRLQIDEELMQELKDIAE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAALS+++V+GKPI
Sbjct: 212 IADPDEILLTVDAMTGQNAAETAKGFSASLDLTGVVLTKLDGDTRGGAALSIRDVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E+ + +K+ FDF
Sbjct: 272 KFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEEQTKQLEKMRQNTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q + V MG M ++ MIPGM P A V K +EA++ +MTPEERE
Sbjct: 332 NDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNLDAKQFAHLEAIVGSMTPEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
P+L+ +P RR+R+A +G+ +V++++ Q QMR M GG
Sbjct: 391 PDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMNQATNGNFGG 437
>gi|352683795|ref|YP_004895779.1| signal recognition particle protein [Acidaminococcus intestini
RyC-MR95]
gi|350278449|gb|AEQ21639.1| signal recognition particle protein [Acidaminococcus intestini
RyC-MR95]
Length = 448
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/404 (48%), Positives = 281/404 (69%), Gaps = 4/404 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+RD+R ALLEADV+ VV+ F + E+ G + + Q +VK+V +EL+ L+GGE
Sbjct: 32 LRDVRLALLEADVNFKVVKEFTTKIKERVQGQKIDPNLTAGQYIVKVVHEELIALLGGEQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L F+ + PTVI+LAGLQG GKTT KLANYL+K GK ++VAGDVYRPAAI QL ++
Sbjct: 92 SKLQFSSNPPTVIMLAGLQGAGKTTSIGKLANYLRKNGKKPLMVAGDVYRPAAITQLEVI 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+++ +PV++ G+EV P IA++ ++ A D V++DTAGRL ID+ +MDELK++K
Sbjct: 152 GKELDMPVFSMGSEVSPVTIAQEAIKRANALLCDTVLIDTAGRLHIDEKLMDELKNIKTA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P E+LLVVDAMTGQ+A + FN +GITG I+TKLDGD+RGGA LSVK V+ P+K
Sbjct: 212 VHPDEILLVVDAMTGQDAVTVAEAFNKALGITGLIVTKLDGDARGGAVLSVKSVADCPVK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++ L+PFYPDRMA RILGMGDVLS +EKAQE + + A+ + + + F +
Sbjct: 272 FVGMGEKLDALQPFYPDRMASRILGMGDVLSLIEKAQEAIDVDSAKRLAESMKHNEFTLD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
FL Q + V R+GS+ ++ MIPGMGK + V K ++ +EA+I +MTP+ER+ P
Sbjct: 332 MFLDQMKQVKRLGSLESILSMIPGMGKFSKQFEGVDLDGKEVRRLEAIITSMTPKERQNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
++ S RRKR+A G+ Q V++L+ Q + + MK + G+
Sbjct: 392 RIINGS--RRKRIAAGCGQRVQDVNRLLKQFEESKKLMKTMQGM 433
>gi|268316589|ref|YP_003290308.1| signal recognition particle protein [Rhodothermus marinus DSM 4252]
gi|262334123|gb|ACY47920.1| signal recognition particle protein [Rhodothermus marinus DSM 4252]
Length = 450
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/418 (48%), Positives = 286/418 (68%), Gaps = 7/418 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IRRALLEADV+ V R F + V E+A+G ++ V P QQLVKIV DELV+L+G E
Sbjct: 31 MREIRRALLEADVNYQVAREFTERVKEKALGTKVLSSVSPGQQLVKIVYDELVRLLGSEQ 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++ + + PTVIL+AGLQG GKTT AKLA Y KK+G++ +L A DVYRPAA++QL L
Sbjct: 91 VDINLSPTPPTVILVAGLQGSGKTTFCAKLALYFKKKGRAPLLAAADVYRPAAVEQLKTL 150
Query: 121 GEQVGVPVYT---AGTEVKPS-QIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD 176
+ VPVY+ G V+ + ++A++ ++EA++ D+VI+DTAGRL ID+AMM E++
Sbjct: 151 AASINVPVYSIEENGQVVQDAVRVAREAVQEARRTARDIVIIDTAGRLHIDEAMMQEVEQ 210
Query: 177 VKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSG 236
+K + P E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 211 IKEAVRPHEILFVVDSMTGQDAVNTAKAFNERLDFDGVVLTKLDGDTRGGAALSIRSVVN 270
Query: 237 KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN 296
KPIK GE+++ L PFYPDRMA RILGMGDV+S VE+AQE AE++++K+ SA+
Sbjct: 271 KPIKFASTGEKLDALTPFYPDRMAQRILGMGDVISLVERAQEQYDARQAEKLRRKLRSAD 330
Query: 297 FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEERE 356
F+ DF +Q + + +MGS+ +IGMIPG+G+ + + + K +EAMI +MTPEER
Sbjct: 331 FNLEDFYEQLQRIKKMGSLRELIGMIPGLGRYVK-DLDVDDDAFKHIEAMILSMTPEERR 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+++ S RR+R+A+ SG V+QL+ Q +MR MK++ +M G L L
Sbjct: 390 NPDIIDAS--RRRRIARGSGMEVSDVNQLLRQFKEMRKMMKSMSKLMGKGRAVDLRQL 445
>gi|419815224|ref|ZP_14339869.1| signal recognition particle protein, partial [Streptococcus sp.
GMD2S]
gi|404468938|gb|EKA13791.1| signal recognition particle protein, partial [Streptococcus sp.
GMD2S]
Length = 412
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/399 (48%), Positives = 280/399 (70%), Gaps = 9/399 (2%)
Query: 10 EADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSR 69
EADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G + SE++ +
Sbjct: 1 EADVALPVVKDFIKKVRERAIGHEVIDTLNPAQQIIKIVDEELTAVLGSDTSEIIKSPKI 60
Query: 70 PTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVILGEQVGVPV 128
PT+I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL LG+Q+ VPV
Sbjct: 61 PTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPV 120
Query: 129 YTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLL 188
+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK + P E+LL
Sbjct: 121 FALGTEVPAVEIVRQGLEQAQANHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILL 180
Query: 189 VVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERM 248
V+DAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK G GE++
Sbjct: 181 VIDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKI 240
Query: 249 EDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRT 308
D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFNDF+ Q
Sbjct: 241 TDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQ 300
Query: 309 VARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKPELLAESPV 366
V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P+LL +P
Sbjct: 301 VQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENPDLL--NPS 357
Query: 367 RRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 358 RRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 393
>gi|304383803|ref|ZP_07366261.1| signal recognition particle protein [Prevotella marshii DSM 16973]
gi|304335059|gb|EFM01331.1| signal recognition particle protein [Prevotella marshii DSM 16973]
Length = 452
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/428 (46%), Positives = 290/428 (67%), Gaps = 9/428 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL +LMGG+
Sbjct: 31 LKDVRRALLDADVNYKVAKTFTDTVKQKALGMNVLTAVKPGQLMVKIVHDELAELMGGQA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E V K+RP +IL++GLQG GKTT S KLAN LK KQ + +LVA DVYRPAAI+QL +
Sbjct: 91 TE-VNLKNRPAIILMSGLQGSGKTTFSGKLANLLKTKQHRHPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G Q+GV VY+ +IA+ ++ AK K+ D V++DTAGRL +D+ MM E+ +K+
Sbjct: 150 VGTQIGVEVYSEPDSKDVVEIAQHAIQHAKAKSYDTVVIDTAGRLAVDEEMMSEIATLKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AVTPDETLFVVDAMTGQDAVNTAKEFNDRLNFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ F+PDRMA RILGMGD++S VE+AQE +E+A +Q+KI FDF
Sbjct: 270 KFIGTGEKMEAIDVFHPDRMADRILGMGDIVSLVERAQEQFDEEEARRLQRKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL Q + + +MG++ + MIPG+GK + + + K +EA+I +MTP+ER PE
Sbjct: 330 EDFLNQIQQIKKMGNLKDLAAMIPGVGKAIK-DIDIDDNAFKGIEAIIRSMTPKERTHPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALK 419
+L S R++R+A+ SG Q++++L+ Q QMR MK +M GG+ + + A+K
Sbjct: 389 ILNTS--RKQRIAKGSGTDIQEINKLLKQFEQMRKMMK----MMSGGAGSNMMRMAGAMK 442
Query: 420 SEQKAPPG 427
+ + PG
Sbjct: 443 NMRGRMPG 450
>gi|310641514|ref|YP_003946272.1| signal recognition (srp) component [Paenibacillus polymyxa SC2]
gi|386040545|ref|YP_005959499.1| signal recognition particle 54 kDa protein 2 SRP54 [Paenibacillus
polymyxa M1]
gi|309246464|gb|ADO56031.1| Signal recognition (SRP) component [Paenibacillus polymyxa SC2]
gi|343096583|emb|CCC84792.1| signal recognition particle 54 kDa protein 2 SRP54 [Paenibacillus
polymyxa M1]
Length = 458
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/418 (47%), Positives = 286/418 (68%), Gaps = 5/418 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F+ V E++VG ++ P ++ IV EL +LMGG
Sbjct: 32 MREVRLALLEADVNFKVVKDFIAKVKEKSVGKEVMDSFTPGMVIIDIVNKELTELMGGSQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L A PTVI++ GLQG GKTT S KLA L+KQ +LVAGD+YRPAAI QL IL
Sbjct: 92 AKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKLLQKQNHRPLLVAGDIYRPAAIKQLQIL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ PV+T G + P +IAKQGL+ AK D VI+DTAGRL +D+ +M+EL+ +
Sbjct: 152 GEQINAPVFTLGDQTSPVEIAKQGLQHAKDNGNDYVIIDTAGRLHVDEELMEELRQIHTN 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+MTGQ+A + FN + +TG +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 VKPDEVLLVVDSMTGQDAVNVAEHFNNSLELTGVVLTKLDGDTRGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ +EPF+P+RMA RILGMGD+LS +EKAQ + + A+EM++K+ +A F F
Sbjct: 272 FATLGEKLDAMEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEMERKMRNAEFTFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V ++G + +++ MIPGMG + + ++ +K + +EA++ +MT +E++ P+
Sbjct: 332 DFLEQMDQVKKLGPIDQILDMIPGMGNMKQMKDIKVDDKQMGRIEAIVHSMTKQEKQNPD 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALSNLE 415
++ S RRKR+A SG + +V++L+ Q +MR MK +M +GG AL L+
Sbjct: 392 MINHS--RRKRIAVGSGTSLAEVNRLIKQFDEMRRMMKQFSDMMGPKGGKNKALKQLK 447
>gi|325290414|ref|YP_004266595.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Syntrophobotulus glycolicus DSM 8271]
gi|324965815|gb|ADY56594.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Syntrophobotulus glycolicus DSM 8271]
Length = 461
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 281/402 (69%), Gaps = 4/402 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ + + E+AVG ++ + P Q ++KIV +E+V +MGG
Sbjct: 33 MREVRVALLEADVNFKVVKDLIAKIKERAVGQEVLESLTPGQHVIKIVNEEMVAMMGGSE 92
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L + PTV++L GLQG GKTT AKLAN LKKQGK +LVA D+YRPAAI QL +L
Sbjct: 93 SKLAISSKPPTVVMLVGLQGAGKTTHGAKLANMLKKQGKHPLLVACDIYRPAAIKQLQVL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV++ G E P +IA + L+ A K D VI+DTAGRL I++ +M EL+D+K V
Sbjct: 153 GEQIKVPVFSLGQE-NPVKIAGESLDYAGKNGHDTVIIDTAGRLHINEELMGELEDIKAV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + TFN ++ ++G IL+KLDGD+RGGAA+SV+ V+G PIK
Sbjct: 212 VQPHEILLVVDAMTGQDAVNVAETFNSKLALSGVILSKLDGDTRGGAAISVRSVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+M+ LE FYPDRM RILGMGDVL+ +EKAQ + A+E+++KI +
Sbjct: 272 YAGVGEKMDALEVFYPDRMVSRILGMGDVLTLIEKAQNAFDDKKAKELEEKIRKQELTLD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + +MGS+S V+ MIPG+GK V+ +K +EAMI++MT EER +P +
Sbjct: 332 DFLDQINQLRKMGSLSSVLEMIPGIGK-QLKDVQIDDKEFARVEAMIQSMTVEERTRPAV 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
+ +S R+KR+A+ SG + Q V +L+ Q Q + MK + G+
Sbjct: 391 IKDS--RKKRIARGSGTSVQDVGKLIKQYEQTKKMMKQMSGL 430
>gi|312862888|ref|ZP_07723128.1| signal recognition particle protein [Streptococcus vestibularis
F0396]
gi|322516902|ref|ZP_08069799.1| signal recognition particle protein [Streptococcus vestibularis
ATCC 49124]
gi|311101748|gb|EFQ59951.1| signal recognition particle protein [Streptococcus vestibularis
F0396]
gi|322124525|gb|EFX96007.1| signal recognition particle protein [Streptococcus vestibularis
ATCC 49124]
Length = 520
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 281/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + QQ++KIV +EL +++G E S
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDASQQIIKIVNEELTEILGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K+Q M++ D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIGADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I + GLE+A+ D V++DTAGRLQID+ +M EL+D+K
Sbjct: 153 GQQINVPVFDMGTETPAVEIVRNGLEQARANKNDYVLIDTAGRLQIDETLMQELRDIKGF 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 AHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|393788846|ref|ZP_10376971.1| signal recognition particle protein [Bacteroides nordii CL02T12C05]
gi|392653680|gb|EIY47334.1| signal recognition particle protein [Bacteroides nordii CL02T12C05]
Length = 440
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/402 (49%), Positives = 275/402 (68%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKTFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
E + P VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 VE-IDTDGHPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y+ P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+ +K+
Sbjct: 150 LAEQIEVPMYSEPDSKNPVEIAQNAIKEAKAKGYDLVIVDTAGRLAVDEEMMNEIAAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPNEILFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP ER PE
Sbjct: 330 NDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIHSMTPAERSNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S RR R+A+ SG T Q+V++L+ Q Q R MK + G
Sbjct: 389 ILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|392971839|ref|ZP_10337231.1| signal recognition particle protein Ffh [Staphylococcus equorum
subsp. equorum Mu2]
gi|403046837|ref|ZP_10902306.1| signal recognition particle [Staphylococcus sp. OJ82]
gi|392509552|emb|CCI60521.1| signal recognition particle protein Ffh [Staphylococcus equorum
subsp. equorum Mu2]
gi|402763533|gb|EJX17626.1| signal recognition particle [Staphylococcus sp. OJ82]
Length = 455
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/401 (47%), Positives = 289/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VS++A+G +++ + P QQ++KIV++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKEFVKTVSDRALGSDVMKSLTPGQQVIKIVQEELTQLMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+ + A PTV+++ GLQG GKTT + KLA + KK K +LVA D+YRPAAIDQL
Sbjct: 92 ATIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAADIYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PVY+ G +VKP QI + + AK+ ++D VI+DTAGRL +D+A+M EL DVK
Sbjct: 152 VGKQIDIPVYSEGDQVKPQQIVENAIAHAKEAHLDFVIIDTAGRLHVDEALMQELSDVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ+A + +F+ ++ ++G LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ITKPDEIMLVVDAMTGQDAVNVAESFDSQLELSGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LE F+P+RMA RILGMGDVLS +EKAQ + ++ A++++KK+ +++F
Sbjct: 272 KFVGMSEKLDGLEAFHPERMASRILGMGDVLSLIEKAQTDVDEDKAKDLEKKMRTSSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+Q V +G + ++ MIPGM K+ + + +K + ++A+I++MTP ER KP
Sbjct: 332 EDFLEQLDQVKSLGPLDDIMKMIPGMNKMKGIENMNMDDKQIDHIKAIIQSMTPNERNKP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
E L S R+KR+A+ SG++ Q++++L+ Q M+ MK
Sbjct: 392 ETLNVS--RKKRIAKGSGRSVQEINRLMKQFTDMKKMMKQF 430
>gi|306833449|ref|ZP_07466576.1| signal recognition particle protein [Streptococcus bovis ATCC
700338]
gi|336064234|ref|YP_004559093.1| signal recognition particle subunit SRP54/Ffh [Streptococcus
pasteurianus ATCC 43144]
gi|304424219|gb|EFM27358.1| signal recognition particle protein [Streptococcus bovis ATCC
700338]
gi|334282434|dbj|BAK30007.1| signal recognition particle, subunit SRP54/Ffh [Streptococcus
pasteurianus ATCC 43144]
Length = 521
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/407 (48%), Positives = 282/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL +++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDPTQQIVKIVNEELTEILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
EL + PT+I++ GLQG GKTT + KLAN L K + +++A D+YRPAAIDQL L
Sbjct: 93 ELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKDENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ GT+ +I GL +AK+ + D VI+DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GSQINVPVFDMGTDHSAVEIVTNGLAQAKENHNDYVIIDTAGRLQIDEKLMEELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++ KPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVADEFNKQLDITGVVLTKIDGDTRGGAALSIREITSKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA + EK++ A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALKNFKVDEKAVARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|381209995|ref|ZP_09917066.1| signal recognition particle protein [Lentibacillus sp. Grbi]
Length = 447
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/408 (47%), Positives = 295/408 (72%), Gaps = 8/408 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
R++R ALLEADV+ VV+ ++ + E+AVG ++ + P QQ++K+V++EL +LMGGE S
Sbjct: 33 REVRLALLEADVNFKVVKDLIKRIKERAVGQEVMESLTPGQQVIKVVKEELSELMGGEQS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
++ + PTVI++AGLQG GKTT S KLA++L KK + +LVA D+YRPAAIDQL +
Sbjct: 93 KIAVSDRPPTVIMMAGLQGAGKTTTSGKLASHLRKKHNRKPLLVAADIYRPAAIDQLETV 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+G+PV++ GT+ P IAK+ +E+AK+++ D VI+DTAGRL +D+ +M EL+ +K
Sbjct: 153 GHQLGMPVFSKGTDANPVDIAKEAVEQAKEEHNDYVIIDTAGRLHVDEDLMGELEQIKAA 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+ LVVDAMTGQ+A + +FN ++ ++G +LTKLDGD+RGGAALS++ V+G PIK
Sbjct: 213 VNPDEIFLVVDAMTGQDAVNVAESFNEQLELSGVVLTKLDGDTRGGAALSIRAVTGTPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++ LEPF P+ MA RILGMGDVLS ++KA+ + ++ A+E+++K+ + +F F+
Sbjct: 273 FAGMGEKLDQLEPFRPESMASRILGMGDVLSLIDKAETNVNEQQAKELEEKMRTMSFTFD 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGK---ITPAQVREAEKSLKIMEAMIEAMTPEEREK 357
DFL+Q V +MG + ++ MIPG K + AQ+ EK L +EA+I++MT +ER+
Sbjct: 333 DFLEQMGQVKKMGPLEDLMNMIPGANKMKGLKNAQID--EKQLVYVEAIIQSMTKDERQD 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P L+ S R+KR+A+ SG + QV++L+ Q +M+ MK + + +G
Sbjct: 391 PSLMNAS--RKKRIAKGSGTSVSQVNRLLKQFNEMKKMMKQMTNMQKG 436
>gi|450071676|ref|ZP_21848262.1| signal recognition particle protein [Streptococcus mutans M2A]
gi|449212110|gb|EMC12488.1| signal recognition particle protein [Streptococcus mutans M2A]
Length = 516
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/407 (47%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQIKVPVFDMGTDHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEDEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|345303700|ref|YP_004825602.1| signal recognition particle protein [Rhodothermus marinus
SG0.5JP17-172]
gi|345112933|gb|AEN73765.1| signal recognition particle protein [Rhodothermus marinus
SG0.5JP17-172]
Length = 450
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/418 (48%), Positives = 286/418 (68%), Gaps = 7/418 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IRRALLEADV+ V R F + V E+A+G ++ V P QQLVKIV DELV+L+G E
Sbjct: 31 MREIRRALLEADVNYQVAREFTERVKEKALGTKVLTSVSPGQQLVKIVYDELVRLLGSEQ 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++ + + PTVIL+AGLQG GKTT AKLA Y KK+G++ +L A DVYRPAA++QL L
Sbjct: 91 VDINLSPTPPTVILVAGLQGSGKTTFCAKLALYFKKKGRAPLLAAADVYRPAAVEQLKTL 150
Query: 121 GEQVGVPVYT---AGTEVKPS-QIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD 176
+ VPVY+ G V+ + ++A++ ++EA++ D+VI+DTAGRL ID+AMM E++
Sbjct: 151 AASINVPVYSIEENGQVVQDAVRVAREAVQEARRTARDLVIIDTAGRLHIDEAMMQEVEQ 210
Query: 177 VKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSG 236
+K + P E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V
Sbjct: 211 IKEAVRPHEILFVVDSMTGQDAVNTAKAFNERLDFDGVVLTKLDGDTRGGAALSIRSVVN 270
Query: 237 KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN 296
KPIK GE+++ L PFYPDRMA RILGMGDV+S VE+AQE AE++++K+ +A+
Sbjct: 271 KPIKFASTGEKLDALTPFYPDRMAQRILGMGDVISLVERAQEQYDARQAEKLRRKLRTAD 330
Query: 297 FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEERE 356
FD DF +Q + + +MGS+ +IGMIPG+G+ + + + K +EAMI +MTPEER
Sbjct: 331 FDLEDFYEQLQRIKKMGSLRELIGMIPGLGRYVK-DLDVDDDAFKHIEAMILSMTPEERR 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+++ S RR+R+A+ SG V+QL+ Q +MR MK++ +M G L L
Sbjct: 390 NPDIIDAS--RRRRIARGSGMEVSDVNQLLRQFKEMRKMMKSMSKLMGKGRAVDLRQL 445
>gi|325269145|ref|ZP_08135765.1| signal recognition particle protein [Prevotella multiformis DSM
16608]
gi|324988532|gb|EGC20495.1| signal recognition particle protein [Prevotella multiformis DSM
16608]
Length = 453
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/402 (49%), Positives = 278/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKSFTDTVKQKALGMNVLTAVKPGQLMVKIVHDELAELMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L + RP VIL++GLQG GKTT S KLAN LK K+ K+ +LVA DVYRPAA++QL +
Sbjct: 91 VGLNLS-GRPAVILMSGLQGSGKTTFSGKLANMLKTKEHKNPLLVACDVYRPAAVEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G QVG PVY+ ++IA + EAK + DVVI+DTAGRL +D+ MMDE++ +K
Sbjct: 150 VGGQVGAPVYSEPGNKNVNEIADHAIAEAKARGNDVVIIDTAGRLAVDEEMMDEIESLKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 HVNPDETLFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFIGTGEKMEAVDVFHPGRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKERSHPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 389 VLNNS--RRQRIAKGSGTNLQEVNRLIKQFDQTRKMMKMVTG 428
>gi|381337033|ref|YP_005174808.1| signal recognition particle protein [Leuconostoc mesenteroides
subsp. mesenteroides J18]
gi|356644999|gb|AET30842.1| signal recognition particle protein [Leuconostoc mesenteroides
subsp. mesenteroides J18]
Length = 491
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/409 (49%), Positives = 273/409 (66%), Gaps = 6/409 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ V++FV V E+A G ++ G+ P QQ+VKIV DEL MG E
Sbjct: 32 MREIRLALLEADVNYDTVKKFVANVREKASGTDIMEGLNPAQQIVKIVNDELTATMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PT+I++AGLQG GKTT AKLA LK + + +L+A D+YRPAAIDQL I
Sbjct: 92 VPLNKSPKIPTIIMMAGLQGAGKTTTVAKLAYKLKNENNARPLLIAADIYRPAAIDQLEI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG + +PV+ GT+V P I + GLE+A + D V +DTAGRLQID+ +M ELKD+
Sbjct: 152 LGRDLDIPVFAMGTDVNPRDIVRAGLEKAAENKNDYVFIDTAGRLQIDEELMQELKDIAE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAALS+++V+GKPI
Sbjct: 212 IADPDEILLTVDAMTGQNAAETAKGFSASLDLTGVVLTKLDGDTRGGAALSIRDVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E+ + +K+ FDF
Sbjct: 272 KFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEEQTKQLEKMRQNTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q + V MG M ++ MIPGM P A V K +EA++ +MTPEERE
Sbjct: 332 NDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNLNAKQFAHLEAIVGSMTPEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
P+L+ +P RR+R+A +G+ +V++++ Q QMR M GG
Sbjct: 391 PDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMNQATNGNFGG 437
>gi|118443987|ref|YP_878286.1| signal recognition particle protein [Clostridium novyi NT]
gi|118134443|gb|ABK61487.1| signal recognition particle protein [Clostridium novyi NT]
Length = 451
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/388 (51%), Positives = 282/388 (72%), Gaps = 2/388 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ +VR+FV+ E+ +G +++ + P QQ+VKIV DEL +LMG
Sbjct: 32 MREVKLALLEADVNYKIVRQFVKTTGEKCLGEEVMKSLTPGQQVVKIVNDELKELMGSTE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ F+ TVI+L GLQG GKTT++ KLA L+K K +LVA D+YRPAAI QL ++
Sbjct: 92 SKIEFSNKGLTVIMLVGLQGAGKTTMAGKLALQLRKNNKKPLLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ G +V P IAK +E AK N +VVI+DTAGRL ID+A+M+EL+++K
Sbjct: 152 GKQIDVPVFSMGDKVSPVDIAKASIEHAKNNNNNVVIIDTAGRLHIDEALMEELENIKGS 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + TFN ++ ITG ILTKLDGD+RGGAALS+K V+GKPIK
Sbjct: 212 VEPNEILLVVDSMTGQDAVNVSETFNNKLDITGVILTKLDGDTRGGAALSIKAVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M DLE F+PDRMA RILGMGDVLS +EKAQE + +E A+E+ K+++ F+
Sbjct: 272 YVGLGEKMNDLEVFHPDRMASRILGMGDVLSLIEKAQEAIDEEKAKELGDKMLNLEFNLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF + +MG ++++I MIPG+ ++ + EK +K +EAMI++MT +ER P
Sbjct: 332 DFKDSMAQMKKMGPLTKIIEMIPGVNSKQLQGLDLSRGEKEIKKIEAMIDSMTLKERRDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLV 386
L+A SP R++R+A SG QQV++L+
Sbjct: 392 NLVASSPSRKRRIANGSGCNVQQVNKLL 419
>gi|322389552|ref|ZP_08063102.1| signal recognition particle protein [Streptococcus parasanguinis
ATCC 903]
gi|321143746|gb|EFX39174.1| signal recognition particle protein [Streptococcus parasanguinis
ATCC 903]
Length = 523
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKRVRERAVGHEVIETLNPAQQIVKIVDEELTAILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M EL+DVK +
Sbjct: 153 GQQINVPVFSLGTEVPAVEIVRQGLEQARANHNDYVLIDTAGRLQIDEKLMGELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 AEPNEILLVVDAMIGQEAANVAREFNEQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+GRILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSGRILGMGDMLTLIEKASQEYDEKRSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM PA ++ E+ + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNLKVDEREIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG + +V++ + Q + M+ GV+ G
Sbjct: 392 DLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|445376096|ref|ZP_21426599.1| signal recognition particle protein [Streptococcus thermophilus
MTCC 5460]
gi|445390916|ref|ZP_21428322.1| signal recognition particle protein [Streptococcus thermophilus
MTCC 5461]
gi|444750040|gb|ELW74892.1| signal recognition particle protein [Streptococcus thermophilus
MTCC 5461]
gi|444750146|gb|ELW74983.1| signal recognition particle protein [Streptococcus thermophilus
MTCC 5460]
Length = 520
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 281/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E++VG +I + QQ++KIV +EL +++G E S
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERSVGHEIIDTLDASQQIIKIVNEELTEILGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I + GLE+A+ D V++DTAGRLQID+ +M EL+D+K
Sbjct: 153 GQQINVPVFDMGTETPAVEIVRNGLEQARANKNDYVLIDTAGRLQIDETLMKELRDIKDF 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 AHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVLSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 NLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|260663573|ref|ZP_05864463.1| signal recognition particle protein [Lactobacillus fermentum
28-3-CHN]
gi|260552114|gb|EEX25167.1| signal recognition particle protein [Lactobacillus fermentum
28-3-CHN]
Length = 484
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/417 (47%), Positives = 285/417 (68%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A G +++G+ P QQ+VKIV DEL ++MG
Sbjct: 40 MREIRLALLEADVNFKVVKDFVKTVREKAAGAEVLKGLNPAQQIVKIVNDELTEMMGETA 99
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
+ L + PTVI++ GLQG GKTT + KLA LKK+ + + +A DVYRPAAI QL
Sbjct: 100 TPLNKSAHIPTVIMMVGLQGAGKTTTAGKLAKRLKKEENARPLFIAADVYRPAAITQLQQ 159
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ + VPV+ GT+V P +I +QG+E AK+K+ D VI+DTAGRLQID+ +M+EL +K
Sbjct: 160 VAASIDVPVFEMGTDVDPVEIVRQGMEVAKEKHNDYVIIDTAGRLQIDEQLMEELAKIKE 219
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ A F+ ++ ITG +LTKLDGD+RGGAA+S++ V+GKPI
Sbjct: 220 LAKPDEILLVVDAMTGQNAVNTAQGFDDQLDITGVVLTKLDGDTRGGAAMSIRAVTGKPI 279
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M++L+ F+PDRMA RILGMGD+++ +EKAQE QE A + K+ +FDF
Sbjct: 280 KFVGEGEKMDNLDVFHPDRMASRILGMGDMMTLIEKAQENFDQEQATQAMAKMKENSFDF 339
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q + +MG + ++ M+PGM PA + K ++A+I +MTPEERE
Sbjct: 340 NDFLDQMDQITKMGPLEDLLKMMPGMAN-NPALQNINLDPKQFAHIKAIIYSMTPEEREN 398
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+++ +P RR+R+A SG+ +V++++ Q QMR M+ + G+L + NL
Sbjct: 399 PDMM--NPSRRRRLAAGSGRPIVEVNRMIKQFNQMRKMMRQV----TNGNLSGMENL 449
>gi|313673954|ref|YP_004052065.1| signal recognition particle subunit ffh/srp54 (srp54)
[Calditerrivibrio nitroreducens DSM 19672]
gi|312940710|gb|ADR19902.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Calditerrivibrio nitroreducens DSM 19672]
Length = 448
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/399 (48%), Positives = 273/399 (68%), Gaps = 4/399 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++ +R ALLEADV+ VV++F+ V +A+G +++ + PDQ +K+V DELV ++G
Sbjct: 31 IKQVRIALLEADVNYKVVKKFIDNVQSKAIGEIVLKSLTPDQVFIKLVHDELVSILGSHT 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ + PTVI+L GLQG GKTT + KLA Y +K G+S +LVA D+YRPAAIDQL++L
Sbjct: 91 SKINLKPNPPTVIMLVGLQGSGKTTTAGKLAKYFQKDGRSTLLVADDIYRPAAIDQLIVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ V+ ++IA +G+++AKK D+VI+DTAGRL ID+ +M ELK +K
Sbjct: 151 GNQLKTDVFYDKESKNATEIAVRGVDQAKKSAKDIVIIDTAGRLHIDEDLMKELKSIKNA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+L V DAM GQ+A + FN IGITG I TKLDGD+RGGAALS+ EV+G PIK
Sbjct: 211 VNPDEILFVADAMIGQDAVNVAKQFNEAIGITGVIFTKLDGDARGGAALSIMEVTGVPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++ E F+PDRMA RILGMGDV++ VE AQE + E+A+EM K+ DFN
Sbjct: 271 FVGIGEKLDAFELFHPDRMASRILGMGDVVTLVEMAQEAIDAEEAKEMATKVGKTGLDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
D L+Q R + +MGS+ ++ +IPG+ + V +K K +EA+I +MTPEER+K +
Sbjct: 331 DLLQQFRMIKKMGSLESIMKLIPGLSAMPDLNVD--DKQFKRIEAIIYSMTPEERKKAHI 388
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S R+KR+A+ SG T V++L+ QL QM +K
Sbjct: 389 INGS--RKKRIAKGSGTTVNDVNKLIMQLEQMNKMLKKF 425
>gi|312866548|ref|ZP_07726763.1| signal recognition particle protein [Streptococcus parasanguinis
F0405]
gi|311097847|gb|EFQ56076.1| signal recognition particle protein [Streptococcus parasanguinis
F0405]
Length = 518
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKRVRERAVGHEVIETLNPAQQIVKIVDEELTAILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M EL+DVK +
Sbjct: 153 GQQINVPVFSLGTEVPAVEIVRQGLEQARANHNDYVLIDTAGRLQIDEKLMGELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 AEPNEILLVVDAMIGQEAANVAREFNEQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+GRILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSGRILGMGDMLTLIEKASQEYDEKRSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM PA ++ E+ + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNLKVDEREIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG + +V++ + Q + M+ GV+ G
Sbjct: 392 DLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|284045135|ref|YP_003395475.1| signal recognition particle protein [Conexibacter woesei DSM 14684]
gi|283949356|gb|ADB52100.1| signal recognition particle protein [Conexibacter woesei DSM 14684]
Length = 444
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/415 (49%), Positives = 282/415 (67%), Gaps = 7/415 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+RF AV E+A+G +I + P QQ+VKIV DEL +LMGGE
Sbjct: 31 MREIRLALLEADVNFKVVKRFTNAVKERALGSDVIGQLNPGQQVVKIVNDELAELMGGES 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAG-DVYRPAAIDQLVI 119
+EL F+ S PTVIL+AGLQG GKTT +AKLA L++Q +S + VA DVYRPAA++QL+
Sbjct: 91 AELRFSSSPPTVILMAGLQGSGKTTATAKLARLLREQNRSSVAVAACDVYRPAAVEQLIT 150
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G + G VY GT+ P +IAK E A+++ DV+IVDTAGRL +D+ +M EL ++KR
Sbjct: 151 VGARAGADVYERGTDADPVEIAKWARERAEREGKDVLIVDTAGRLHVDENLMKELAEIKR 210
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NPT VLLVVDAMTGQ+A + F + G +++KLDGD+RGGAALSVK V+GKPI
Sbjct: 211 VTNPTNVLLVVDAMTGQDAVNVAEQFAEVVQFDGVVMSKLDGDARGGAALSVKSVTGKPI 270
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
GE+++ E F+PDRMA RILGMGDV++ +EKA+ + A+E+++KI + F
Sbjct: 271 LFASTGEKLDQFERFHPDRMAQRILGMGDVMTLIEKAESQFDETQAKELERKIRKSEFGL 330
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFL Q R V R+G + ++GM+PG+G +R E+ ++A+I +MT EER P+
Sbjct: 331 DDFLDQLRQVRRLGPLQSLLGMMPGLGGHQLRNLRVDEREFDRIQAIILSMTAEERRNPD 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
++ S RR R+A+ SG Q V L+ Q Q M+ LM M+ G +P + L
Sbjct: 391 IIKGS--RRIRIARGSGTNVQAVKALIRQFGQ----MQRLMKSMQSGKMPDIGAL 439
>gi|417917724|ref|ZP_12561283.1| signal recognition particle protein [Streptococcus parasanguinis
SK236]
gi|342830361|gb|EGU64700.1| signal recognition particle protein [Streptococcus parasanguinis
SK236]
Length = 523
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKRVRERAVGHEVIETLNPAQQIVKIVDEELTAILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M EL+DVK +
Sbjct: 153 GQQINVPVFSLGTEVPAVEIVRQGLEQARANHNDYVLIDTAGRLQIDEKLMGELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 AEPNEILLVVDAMIGQEAANVAREFNEQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+GRILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSGRILGMGDMLTLIEKASQEYDEKRSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM PA ++ E+ + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNLKVDEREIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG + +V++ + Q + M+ GV+ G
Sbjct: 392 DLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|251797472|ref|YP_003012203.1| signal recognition particle protein [Paenibacillus sp. JDR-2]
gi|247545098|gb|ACT02117.1| signal recognition particle protein [Paenibacillus sp. JDR-2]
Length = 462
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 278/401 (69%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F+ V E+A+G+ + + P ++ IV EL +LMGG
Sbjct: 33 MREVRLALLEADVNFKVVKDFIAKVKEKALGLDVSKSFTPGMVVIDIVNKELTELMGGTQ 92
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L A PTVI++ GLQG GKTT +AKLA L+K +LVA D+YRPAAI QL +L
Sbjct: 93 SKLAKANKPPTVIMMVGLQGAGKTTTTAKLAKLLQKGNSKPLLVACDIYRPAAIKQLQVL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ PV++ G + P +IAK GL A++ + D VI DTAGRL ID+A+M+ELK + +
Sbjct: 153 GEQINAPVFSLGDQTSPVEIAKAGLAHARENHNDYVIFDTAGRLHIDEALMEELKQIHQN 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVDAMTGQ+A + +F+ ++ +TG +LTKLDGD+RGGAALSVK V+GKPIK
Sbjct: 213 VKPDEVLLVVDAMTGQDAVNVAQSFHEQLELTGVVLTKLDGDTRGGAALSVKAVTGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ LEPF+PDRMA RILGMGD+LS +EKAQ + + A EM++K+ +A F F+
Sbjct: 273 FAAMGEKIDALEPFHPDRMASRILGMGDMLSLIEKAQANIDADKAAEMERKMRTAEFTFD 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKI--TPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL+Q + +G + +++ M+PGM K+ ++ EK + +EA++ +MT E++KP
Sbjct: 333 DFLEQMAQIRNLGPLDQLMDMLPGMNKMKGNMKDMKVDEKQINRVEAIVRSMTKAEKQKP 392
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
ELL S RRKRVA SG + +V++L+ Q MR MK
Sbjct: 393 ELLNHS--RRKRVAAGSGTSITEVNRLIKQFEDMRKMMKQF 431
>gi|443632733|ref|ZP_21116912.1| signal recognition particle protein [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347556|gb|ELS61614.1| signal recognition particle protein [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 446
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 300/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQDVMKSLTPGQQVIKVVKEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT S KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIAVAKRPPTVIMMVGLQGAGKTTTSGKLANLLRKKHNRKPILVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID +MDEL +VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDELTNVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 IANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ + +F
Sbjct: 272 KFAGLGEKLDALEAFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT E+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVLEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 DIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQMTNMSKG 436
>gi|429738313|ref|ZP_19272125.1| signal recognition particle protein [Prevotella saccharolytica
F0055]
gi|429160509|gb|EKY02970.1| signal recognition particle protein [Prevotella saccharolytica
F0055]
Length = 450
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/402 (50%), Positives = 276/402 (68%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRAL++ADV+ V + F V ++A+GV ++ V+P Q +VK+V DEL +LMGG+
Sbjct: 31 LKDVRRALIDADVNYKVAKSFTDTVKQKALGVNVLTAVKPGQLMVKLVHDELAELMGGDS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L KS+P +IL+AGLQG GKTT S KLAN LK KQ K +LVA DVYRPAAI+QL +
Sbjct: 91 VGLQL-KSKPAIILMAGLQGSGKTTFSGKLANLLKNKQNKKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ Q+GVPVY T +IA ++EAK K DV+++DTAGRL ID+ MMDE+ +K
Sbjct: 150 IAAQIGVPVYAEETNKNVIEIAGNAIKEAKAKGCDVILIDTAGRLAIDEQMMDEISRLKT 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVD+MTGQ+A FN + I G ILTKLDGD+RGGAALS++ V KPI
Sbjct: 210 FVQPDETLFVVDSMTGQDAVNTAREFNERLDIDGVILTKLDGDTRGGAALSIRTVVDKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME L+ FYP RMA RILGMGD++S VE+AQE +E+A +QKKI FDF
Sbjct: 270 KFVGTGEKMEALDVFYPSRMADRILGMGDIVSLVERAQEQFDEEEARRLQKKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL+Q + +MG++ + MIPG+GK + + K +EA+I++MTP+ER P+
Sbjct: 330 NDFLQQIEQIKKMGNLKDLASMIPGVGK-AIKDADIDDDAFKGVEAIIKSMTPKERTNPD 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G
Sbjct: 389 ILNNS--RRQRIAKGSGTNIQEVNKLIKQFDQTRKMMKMVTG 428
>gi|392331490|ref|ZP_10276105.1| signal recognition particle subunit FFH/SRP54 [Streptococcus canis
FSL Z3-227]
gi|391419169|gb|EIQ81981.1| signal recognition particle subunit FFH/SRP54 [Streptococcus canis
FSL Z3-227]
Length = 522
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/401 (47%), Positives = 284/401 (70%), Gaps = 4/401 (0%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAIGHDIIDTLDPTQQILKIVNEELTGILGAETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
EL + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 ELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ +I ++GLE+A++ D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQISVPVFEMGTDHSAVEIVRRGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKGL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP ++LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 VNPNDILLVVDSMIGQEAANVAEEFNRQLSITGLVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF+ Q V MG M ++ MIPGM G + ++ +K + A++ +MTP ERE P+
Sbjct: 333 DFIDQLNQVQNMGPMEDLLKMIPGMAGNPALSHIKVDDKQIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 400
LL +P RR+R+A SG + +V++ + Q + M+ +M
Sbjct: 393 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKTMMQGIM 431
>gi|169824222|ref|YP_001691833.1| signal recognition particle [Finegoldia magna ATCC 29328]
gi|302380887|ref|ZP_07269349.1| signal recognition particle protein [Finegoldia magna
ACS-171-V-Col3]
gi|303234951|ref|ZP_07321576.1| signal recognition particle protein [Finegoldia magna BVS033A4]
gi|417925858|ref|ZP_12569273.1| signal recognition particle protein [Finegoldia magna
SY403409CC001050417]
gi|167831027|dbj|BAG07943.1| signal recognition particle [Finegoldia magna ATCC 29328]
gi|302311265|gb|EFK93284.1| signal recognition particle protein [Finegoldia magna
ACS-171-V-Col3]
gi|302494069|gb|EFL53850.1| signal recognition particle protein [Finegoldia magna BVS033A4]
gi|341590783|gb|EGS34014.1| signal recognition particle protein [Finegoldia magna
SY403409CC001050417]
Length = 446
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/404 (50%), Positives = 297/404 (73%), Gaps = 4/404 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+ V E+A+ ++ + P QQ++KIV +EL K+MG +
Sbjct: 32 MREVKLALLEADVNYKVVKDFISQVKERAIDSSVLESLTPGQQVIKIVNEELTKMMGEKE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+L + +PTVI+L GLQG GKTT + KLA LK + KS +LVA D+YRPAAI QL ++
Sbjct: 92 EKLNVSPMKPTVIMLCGLQGAGKTTHAGKLALNLKNKNKSVLLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G +VGV V+ G ++ P +I+K+ +EEAK+KN+D VI+DTAGRL ID +MDELK++K+
Sbjct: 152 GGKVGVEVFEMG-QINPVEISKKAIEEAKRKNIDYVIIDTAGRLHIDDTLMDELKNIKQE 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP+++LLVVDAMTGQ+A + FN ++ ITG ILTKLDGD+RGGAALS+++V+ KPIK
Sbjct: 211 VNPSDILLVVDAMTGQDAVNVAAKFNEDLDITGIILTKLDGDARGGAALSIRQVADKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ DLEPF+PDRMA RILGMGDVLS +EKAQ ++ A+E+++KI + +FDFN
Sbjct: 271 FIGVGEKLGDLEPFHPDRMASRILGMGDVLSLIEKAQNQFDEKKAKELEEKIKAQSFDFN 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MG M ++ MIPG+ QV K +EA+I++MT +ERE P++
Sbjct: 331 DFLDQMQQIKKMGPMQDILAMIPGVDSKMLKQVNFDNKEFDKIEAIIKSMTKQERENPDI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME 404
++ S RRKR+A+ G+ + V++L+ Q +M+V MKN MG ++
Sbjct: 391 ISIS--RRKRIAKGCGQDQVAVNKLLKQFKEMKVMMKN-MGALQ 431
>gi|227515698|ref|ZP_03945747.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus fermentum
ATCC 14931]
gi|227085946|gb|EEI21258.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus fermentum
ATCC 14931]
Length = 476
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/417 (47%), Positives = 285/417 (68%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A G +++G+ P QQ+VKIV DEL ++MG
Sbjct: 32 MREIRLALLEADVNFKVVKDFVKTVREKAAGAEVLKGLNPAQQIVKIVNDELTEMMGETA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
+ L + PTVI++ GLQG GKTT + KLA LKK+ + + +A DVYRPAAI QL
Sbjct: 92 TPLNKSAHIPTVIMMVGLQGAGKTTTAGKLAKRLKKEENARPLFIAADVYRPAAITQLQQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+ + VPV+ GT+V P +I +QG+E AK+K+ D VI+DTAGRLQID+ +M+EL +K
Sbjct: 152 VAASIDVPVFEMGTDVDPVEIVRQGMEVAKEKHNDYVIIDTAGRLQIDEQLMEELAKIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ A F+ ++ ITG +LTKLDGD+RGGAA+S++ V+GKPI
Sbjct: 212 LAKPDEILLVVDAMTGQNAVNTAQGFDDQLDITGVVLTKLDGDTRGGAAMSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M++L+ F+PDRMA RILGMGD+++ +EKAQE QE A + K+ +FDF
Sbjct: 272 KFVGEGEKMDNLDVFHPDRMASRILGMGDMMTLIEKAQENFDQEQATQAMAKMKENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q + +MG + ++ M+PGM PA + K ++A+I +MTPEERE
Sbjct: 332 NDFLDQMDQITKMGPLEDLLKMMPGMAN-NPALQNINLDPKQFAHIKAIIYSMTPEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+++ +P RR+R+A SG+ +V++++ Q QMR M+ + G+L + NL
Sbjct: 391 PDMM--NPSRRRRLAAGSGRPIVEVNRMIKQFNQMRKMMRQV----TNGNLSGMENL 441
>gi|333377126|ref|ZP_08468862.1| signal recognition particle protein [Dysgonomonas mossii DSM 22836]
gi|332886339|gb|EGK06583.1| signal recognition particle protein [Dysgonomonas mossii DSM 22836]
Length = 439
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/394 (50%), Positives = 275/394 (69%), Gaps = 5/394 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ ++F + V E+A+G ++ V+P+Q +VKIV DEL LMGG
Sbjct: 31 LKDVRRALLDADVNYKTAKQFTETVKEKAMGQNVLTAVKPEQLMVKIVHDELAALMGGTA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
++ V K P VIL++GLQG GKTT S KLA LK K+GK+ +LVAGDVYRPAAI+QL I
Sbjct: 91 TD-VHLKGNPAVILMSGLQGSGKTTFSGKLAKMLKSKKGKNPLLVAGDVYRPAAIEQLKI 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+ VPVY P QIA+ ++ AK+ D+VIVDTAGRL ID+ MM E+ +K
Sbjct: 150 LGEQIEVPVYWEEGSKNPVQIAQNAIKHAKQNGNDLVIVDTAGRLAIDEEMMKEITAIKD 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AVKPDEILFVVDSMTGQDAVNTAKEFNDRLNFDGVVLTKLDGDTRGGAALSIRSVVDKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ L+ F+P+RMA RILGMGD++S VE+AQE +E+A +QKKI FDF
Sbjct: 270 KFVGTGEKMDALDVFHPERMADRILGMGDIVSLVERAQEQYDEEEARRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF+ Q + + +MG++ + MIPG+GK + + + K +EA+I +MTP+ER PE
Sbjct: 330 NDFIGQIQQIKKMGNLKDLASMIPGVGKAIK-DMDIDDDAFKSIEAIIYSMTPKERSTPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
+L S RR+R+A+ SG + Q+V++L+ Q Q R
Sbjct: 389 ILNGS--RRERIAKGSGTSIQEVNKLIKQFDQTR 420
>gi|153808568|ref|ZP_01961236.1| hypothetical protein BACCAC_02864 [Bacteroides caccae ATCC 43185]
gi|423219382|ref|ZP_17205878.1| signal recognition particle protein [Bacteroides caccae CL03T12C61]
gi|149128890|gb|EDM20107.1| signal recognition particle protein [Bacteroides caccae ATCC 43185]
gi|392625432|gb|EIY19498.1| signal recognition particle protein [Bacteroides caccae CL03T12C61]
Length = 440
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/398 (49%), Positives = 273/398 (68%), Gaps = 5/398 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKNFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
E V +RP VIL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 VE-VDIDARPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y P +IA+ ++EAK K D+VIVDTAGRL +D+ MM+E+ +K
Sbjct: 150 LAEQIDVPMYCELESKNPVEIAQHAIQEAKAKGYDLVIVDTAGRLAVDEQMMNEIAAIKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPNEILFVVDSMTGQDAVNTAKEFNERLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP ER PE
Sbjct: 330 NDFLSQIAQIKKMGNLKDLASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPAERSNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
+L S RR R+A+ SG T Q+V++L+ Q Q R MK
Sbjct: 389 ILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMK 424
>gi|323340725|ref|ZP_08080977.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
gi|323091848|gb|EFZ34468.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
Length = 493
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/417 (47%), Positives = 289/417 (69%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V +AVG ++ + P QQ+VKIV +EL+K+MG
Sbjct: 44 MREIRLALLEADVNFKVVKDFVKEVKNRAVGAEVLESLTPAQQIVKIVNEELIKVMGESA 103
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L +K PTVI++ GLQG GKTT + KLA LKK+ + +++A DVYRPAA+DQL
Sbjct: 104 VSLNKSKKIPTVIMMVGLQGAGKTTTAGKLAYKLKKEENARPLMIAADVYRPAAVDQLKT 163
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+ + VPV+ GT+V P +I +QG++ A+++ D VI+DTAGRLQID+ +M+EL +K
Sbjct: 164 VGKSIDVPVFELGTDVDPVEIVRQGMKLAEEQKNDYVIIDTAGRLQIDEKLMNELARIKE 223
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LL VD+MTGQ A + FN + +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 224 LTHPDEILLTVDSMTGQNAVEVAQGFNDTLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 283
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M L+ FYP+RMA RILGMGD+L+ +EKAQ+ Q+ AEE+ K+ FDF
Sbjct: 284 KFIGQGEKMTALDVFYPERMASRILGMGDMLTLIEKAQQDFDQKKAEELADKMRENTFDF 343
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDF++Q V MG + ++ MIPGM PA V+ K ++ +A++ +MTP ERE
Sbjct: 344 NDFIEQMEQVQNMGPIEDIMKMIPGMAN-NPALKNVKVDPKDIEHTKAIVYSMTPAERED 402
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P++L +P RR+R+A SG+ Q+V++++ Q QMR ++M M G+ + N+
Sbjct: 403 PDML--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMR----DMMQKMTNGNFGGMENM 453
>gi|450159193|ref|ZP_21879300.1| signal recognition particle protein [Streptococcus mutans 66-2A]
gi|449241479|gb|EMC40105.1| signal recognition particle protein [Streptococcus mutans 66-2A]
Length = 516
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/406 (47%), Positives = 282/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM + + V+ E + A++ +MTP ERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 393 LL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|347532240|ref|YP_004839003.1| signal recognition particle protein [Roseburia hominis A2-183]
gi|345502388|gb|AEN97071.1| signal recognition particle protein [Roseburia hominis A2-183]
Length = 452
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/411 (49%), Positives = 287/411 (69%), Gaps = 7/411 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++ ALLEADV+ VV++FV+ V E+AVG ++ G+ P Q ++KIV +E+VKLMG E
Sbjct: 32 LKEVKMALLEADVNFKVVKQFVKDVEERAVGQDVMNGLNPGQMVIKIVNEEMVKLMGSET 91
Query: 61 SELVFAKSRP-TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ + TVI++ GLQG GKTT +AKLA K++GK +LVAGDVYRPAAI+QL I
Sbjct: 92 AEITLQPGKAVTVIMMTGLQGAGKTTTAAKLAGKFKQKGKKVLLVAGDVYRPAAIEQLQI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
G++ GV V++ G + P IAK +E A K + ++VI+DTAGRL ID+ MM EL +K
Sbjct: 152 NGQKQGVEVFSMGDKNSPVNIAKAAMEHAAKNDFNIVIIDTAGRLHIDEDMMAELIQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ + +LVVDAMTGQ+A + TF+ IGI G ILTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 NVTVHQTVLVVDAMTGQDAVNVAKTFDERIGIDGVILTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
G GE++ DLE FYPDRMA RILGMGDVL+ +EKAQE +E A+++++K+ FDF
Sbjct: 272 FYAGMGEKLSDLEQFYPDRMASRILGMGDVLTLIEKAQEDFDEERAKKIEQKMRKNEFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGM----GKITPAQVREAEKSLKIMEAMIEAMTPEER 355
+L+ + +MG +S ++GM+PG+ GK+ AEKSL EA+I +MTPEER
Sbjct: 332 EMYLESMSQMKKMGGLSSILGMMPGLGMGAGKMPDIDEAAAEKSLSRTEAIIYSMTPEER 391
Query: 356 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
+ P LL +P R++R+A +G +V++LV Q QM+ MK + G+M+ G
Sbjct: 392 QNPSLL--NPSRKRRIAVGAGVDIAEVNRLVKQFEQMKKMMKQMPGMMKKG 440
>gi|290580502|ref|YP_003484894.1| signal recognition particle protein subunit [Streptococcus mutans
NN2025]
gi|449875574|ref|ZP_21782275.1| signal recognition particle protein [Streptococcus mutans S1B]
gi|254997401|dbj|BAH88002.1| signal recognition particle protein subunit [Streptococcus mutans
NN2025]
gi|449253736|gb|EMC51678.1| signal recognition particle protein [Streptococcus mutans S1B]
Length = 516
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/407 (47%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTDHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|336324196|ref|YP_004604163.1| signal recognition particle protein [Flexistipes sinusarabici DSM
4947]
gi|336107777|gb|AEI15595.1| signal recognition particle protein [Flexistipes sinusarabici DSM
4947]
Length = 449
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/396 (47%), Positives = 279/396 (70%), Gaps = 7/396 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGE- 59
+R ++ A+LEADV+ VV++F+ V E+A+G +++ + DQ +KIV DEL ++GGE
Sbjct: 31 IRQVKMAMLEADVNYKVVKKFISGVQEKALGEEVLKSLSADQVFIKIVNDELTSILGGED 90
Query: 60 --VSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQL 117
S++ + + PT+I+L GLQG GKTT + KLA + +K K ++VA D+YRPAAIDQL
Sbjct: 91 PSASKITLSSTPPTIIMLVGLQGSGKTTTAGKLAKHFQKNDKRVLMVADDIYRPAAIDQL 150
Query: 118 VILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDV 177
+LG+Q+GV VY+ IA++ E AKK D+VI+DTAGRL ++ +MDEL ++
Sbjct: 151 EVLGKQLGVDVYSDKDNKNAVDIAQKSYEYAKKSAKDIVIIDTAGRLHVNNELMDELFNI 210
Query: 178 KRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGK 237
K+ ++P E+L V DAMTGQ+A + T FN ++ I+G ILTKLDGD+RGGAALS++EV+GK
Sbjct: 211 KKAVSPDEILFVADAMTGQDAVNVATKFNNDLDISGVILTKLDGDARGGAALSIREVTGK 270
Query: 238 PIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANF 297
P+K VG GE+++ EPFYPDRMA RILGMGDV+S VE AQ+ +++++AE++ K+
Sbjct: 271 PLKYVGVGEKLDAFEPFYPDRMASRILGMGDVVSLVEMAQDAIEEDEAEKLADKVSKGGM 330
Query: 298 DFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREK 357
DFND L Q + + +MGS ++ ++PGMG + A V E + +K +EA+I +MTP ER
Sbjct: 331 DFNDMLSQFKMIRKMGSFESIMKLMPGMGNMKKADVDEDQ--IKKIEAIINSMTPRERRY 388
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
+LL S R+KR+A+ SG + V++L++QL QM
Sbjct: 389 YKLLNGS--RKKRIARGSGTSVSDVNKLISQLQQMN 422
>gi|375308192|ref|ZP_09773479.1| signal recognition particle protein [Paenibacillus sp. Aloe-11]
gi|375080523|gb|EHS58744.1| signal recognition particle protein [Paenibacillus sp. Aloe-11]
Length = 458
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/418 (47%), Positives = 286/418 (68%), Gaps = 5/418 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F+ V E++VG ++ P ++ IV EL +LMGG
Sbjct: 32 MREVRLALLEADVNFKVVKDFIAKVKEKSVGKEVMDSFTPGMVIIDIVNKELTELMGGSQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L A PTVI++ GLQG GKTT S KLA L+KQ +LVAGD+YRPAAI QL IL
Sbjct: 92 AKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKLLQKQNHRPLLVAGDIYRPAAIKQLQIL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ PV+T G + P +IAKQGL+ AK D VI+DTAGRL +D+ +M+EL+ +
Sbjct: 152 GEQINAPVFTLGDQTSPVEIAKQGLQHAKDNGNDYVIIDTAGRLHVDEELMEELRQIHAN 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+MTGQ+A + FN + +TG +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 VKPDEVLLVVDSMTGQDAVNVAEHFNSSLELTGVVLTKLDGDTRGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ +EPF+P+RMA RILGMGD+LS +EKAQ + + A+EM++K+ +A F F
Sbjct: 272 FATLGEKLDAMEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEMERKMRNAEFTFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V ++G + +++ MIPGMG + + ++ +K + +EA++ +MT +E++ P+
Sbjct: 332 DFLEQMDQVKKLGPIDQILDMIPGMGNMKQMKDIKVDDKQMGRIEAIVHSMTTQEKQNPD 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALSNLE 415
++ S RRKR+A SG + +V++L+ Q +MR MK +M +GG AL L+
Sbjct: 392 MINHS--RRKRIAVGSGTSLAEVNRLIKQFDEMRRMMKQFSDMMGPKGGKNKALKQLK 447
>gi|336399713|ref|ZP_08580513.1| signal recognition particle subunit FFH/SRP54 (srp54) [Prevotella
multisaccharivorax DSM 17128]
gi|336069449|gb|EGN58083.1| signal recognition particle subunit FFH/SRP54 (srp54) [Prevotella
multisaccharivorax DSM 17128]
Length = 442
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/402 (50%), Positives = 280/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V E+A+G+ ++ ++P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKDFTDTVKEKALGMNVLTAIKPGQLMVKIVHDELARLMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+EL SRP+VIL++GLQG GKTT S KLAN LK KQ K+ +LVA D+YRPAAIDQL +
Sbjct: 91 AEL-HLNSRPSVILMSGLQGSGKTTFSGKLANLLKNKQHKNPLLVACDIYRPAAIDQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GE V V VY+ ++IA L+EAK K DVVI+DTAGRL +D+ MM+E+ +K
Sbjct: 150 VGEGVSVSVYSEPDNKNVNEIADHALQEAKMKGHDVVIIDTAGRLAVDEQMMNEISSLKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 HIHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ F+PDRMA RILGMGDV+S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFIGTGEKMEAIDVFHPDRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFLKQ + +MG++ + MIPG+GK V + +EA+I +MTP+ER PE
Sbjct: 330 NDFLKQIEQIKKMGNIKDLASMIPGVGKAIK-NVDIDNNAFNGIEAIIRSMTPQERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L +S R+ R+A+ SG T Q+V++L+ Q Q R MK + G
Sbjct: 389 ILNQS--RKLRIAKGSGTTIQEVNRLIKQFDQTRKMMKMVTG 428
>gi|339625133|ref|ZP_08660922.1| signal recognition particle protein [Fructobacillus fructosus KCTC
3544]
Length = 489
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/399 (50%), Positives = 274/399 (68%), Gaps = 4/399 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++IR ALLEADVS P V++F+ A+ E+A G ++ G+ QQ+VKIV DEL LMG E
Sbjct: 32 LKEIRLALLEADVSYPTVKKFIAAIREKAKGAEILDGLNAPQQVVKIVNDELTALMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PTVI++AGLQG GKTT AKLA LKK+ K+ +L+A DVYRPAAIDQL +
Sbjct: 92 VPLNKSDKIPTVIMMAGLQGAGKTTTVAKLAYKLKKENKARPLLIAADVYRPAAIDQLEV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+ + +PV++ GT+V P +I K GL++A+ D V +DTAGRLQID+ +M ELKD+
Sbjct: 152 LGKDLDIPVFSEGTDVDPREIVKHGLKQAEANKNDYVFIDTAGRLQIDETLMTELKDIAT 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ A F + +TG +LTKLDGD+RGGAALS+++V+GKPI
Sbjct: 212 IAQPDEILLTVDAMTGQNATETAEGFANALDLTGVVLTKLDGDTRGGAALSIRDVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+ DL+ FYPDRMA RILGMGD+L+F+EKAQ + ++ E +K+ FDF
Sbjct: 272 KFVGQGEKPTDLDVFYPDRMASRILGMGDMLTFIEKAQRDVDEKKQAEQLEKMRQNTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
NDF+ Q R V MG M +I MIPGM G + K+ MEA++ +MT ERE P
Sbjct: 332 NDFVDQLRQVQNMGPMEDLIKMIPGMAGNPALQNLNIDPKTFTHMEAIVSSMTKAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
+LL +P RR+R+A +G+ +V++++ Q QM+ M
Sbjct: 392 DLL--NPSRRRRLAAGAGRPIVEVNKMLKQFDQMKKMMN 428
>gi|450165643|ref|ZP_21881945.1| signal recognition particle protein [Streptococcus mutans B]
gi|449240476|gb|EMC39151.1| signal recognition particle protein [Streptococcus mutans B]
Length = 516
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/407 (47%), Positives = 283/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GV+ G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVISG 433
>gi|357636864|ref|ZP_09134739.1| signal recognition particle protein [Streptococcus macacae NCTC
11558]
gi|357585318|gb|EHJ52521.1| signal recognition particle protein [Streptococcus macacae NCTC
11558]
Length = 517
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/407 (47%), Positives = 279/407 (68%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V +A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKQVRSRAIGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLA+ L K + ML+A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLAHKLIKDENARPMLIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV+ GTE +I QGL +A++ + D V++DTAGRLQID+ +M EL+DVK +
Sbjct: 153 GEQINVPVFDMGTEHSAVEIVSQGLAQARENHNDYVLIDTAGRLQIDEKLMAELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV++++G+PIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAYEFNKQLDITGVVLTKIDGDTRGGAALSVRQITGRPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKTAELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM P A ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFVDQLDQVQNMGPMEDILKMIPGMAN-NPALANIKVDEQEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
ELL +P RR+R+A SG T V++ + Q + M+ G M G
Sbjct: 392 ELL--NPSRRRRIASGSGNTFVNVNKFIKDFNQAKQMMQ---GAMSG 433
>gi|296111749|ref|YP_003622131.1| signal recognition particle protein Ffh [Leuconostoc kimchii IMSNU
11154]
gi|339490980|ref|YP_004705485.1| signal recognition particle protein [Leuconostoc sp. C2]
gi|295833281|gb|ADG41162.1| signal recognition particle protein Ffh [Leuconostoc kimchii IMSNU
11154]
gi|338852652|gb|AEJ30862.1| signal recognition particle protein [Leuconostoc sp. C2]
Length = 491
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/409 (50%), Positives = 271/409 (66%), Gaps = 6/409 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ V++FV V E+A G ++ G+ P QQ+VKIV DEL MG E
Sbjct: 32 MREIRLALLEADVNYDTVKKFVANVREKASGADILEGLNPAQQIVKIVNDELTATMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PT+I++AGLQG GKTT AKLA LKK+ ++ +L+A DVYRPAAIDQL I
Sbjct: 92 VPLNKSPKIPTIIMMAGLQGAGKTTTVAKLAYKLKKESQARPLLIAADVYRPAAIDQLEI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG + +PV+ GTEV P I +QGL +A + D V +DTAGRLQID +M ELKDV
Sbjct: 152 LGRDLDIPVFQLGTEVNPRDIVRQGLAQAAENKNDYVFIDTAGRLQIDDVLMQELKDVAE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAALS+++V+GKPI
Sbjct: 212 IAKPDEILLTVDAMTGQNAAETAKGFSASLDLTGVVLTKLDGDTRGGAALSIRDVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E + +K+ FDF
Sbjct: 272 KFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEAQAKQLEKMRENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q + V MG M ++ MIPGM P A V K +EA++ +MTP ERE
Sbjct: 332 NDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNIDAKQFAHLEAIVSSMTPAEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
P+L+ +P RR+R+A +G+ +V++++ Q QMR M GG
Sbjct: 391 PDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMNQATNGNFGG 437
>gi|223995257|ref|XP_002287312.1| signal recognition particle 54 kDA subunit [Thalassiosira
pseudonana CCMP1335]
gi|220976428|gb|EED94755.1| signal recognition particle 54 kDA subunit [Thalassiosira
pseudonana CCMP1335]
Length = 486
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/380 (52%), Positives = 269/380 (70%), Gaps = 9/380 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++ +RRALL+ADV+L V + V +++G + +GV +QQ +K + DEL+ +MGGE
Sbjct: 31 LKSVRRALLDADVNLDVATALIDGVKRRSLGKEVTKGVTAEQQFIKAMYDELLDMMGGEA 90
Query: 61 SE----LVFAKS----RPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPA 112
+E A S P VILLAGLQG GKTT + KLA L K+ + +LVA DVYRPA
Sbjct: 91 NESNTMATLAHSSVANEPAVILLAGLQGAGKTTAAGKLAFRLPKRNRKVLLVAADVYRPA 150
Query: 113 AIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMD 172
AI+QL ILG+Q+GV V++ G + P+ IAK+ +E+AK++ D V+VDTAGR +D+ +M+
Sbjct: 151 AIEQLQILGKQIGVEVFSMGVDADPADIAKEAVEKAKREGFDTVVVDTAGRQVVDEELME 210
Query: 173 ELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVK 232
EL+ VK+ + P E LLVVDAMTGQ AA+L +F+ +GI+GAILTKLDGDSRGGAA+S++
Sbjct: 211 ELRRVKKTVEPDETLLVVDAMTGQAAASLTASFDAAVGISGAILTKLDGDSRGGAAVSIR 270
Query: 233 EVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKI 292
VSGKPIK VG GE+ DLEPFYPDRMA RILGMGDV+S VEKA + DA +MQ+K+
Sbjct: 271 GVSGKPIKFVGVGEKTNDLEPFYPDRMASRILGMGDVISLVEKASMEVSDADAAKMQEKM 330
Query: 293 MSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAMIEAMT 351
A FDF+DF+ Q+R V++MGSM+ V M+PGMG I +Q+R+ E+ +K EAMI +M
Sbjct: 331 AKAEFDFDDFMTQSRMVSKMGSMAGVAKMLPGMGNMIDSSQMRQVEERIKRSEAMICSMN 390
Query: 352 PEEREKPELLAESPVRRKRV 371
+ER P LL R R+
Sbjct: 391 KKERANPGLLLTDKSARSRL 410
>gi|339641142|ref|ZP_08662586.1| signal recognition particle protein [Streptococcus sp. oral taxon
056 str. F0418]
gi|339454411|gb|EGP67026.1| signal recognition particle protein [Streptococcus sp. oral taxon
056 str. F0418]
Length = 524
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/440 (45%), Positives = 295/440 (67%), Gaps = 26/440 (5%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTTILGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + PT+I++ GLQG GKTT + KLA+ LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPTIIMMVGLQGAGKTTFAGKLAHKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGL +AK + D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLGQAKANHNDYVLIDTAGRLQIDEKLMQELSDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDAMIGQEAANVAREFNSQLEMTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEKKSLEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M +I M+PGM PA + E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQGMGPMEDLIKMLPGMAS-NPALKNFKVDEREIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVME------------- 404
+LL +P RR+R+A SG + V++ + Q + M+ ++ G M
Sbjct: 392 DLL--TPSRRRRIANGSGNSFVDVNKFIKDFNQSKQLMQGVLSGDMSKMMKQMGLNPNNM 449
Query: 405 ------GGSLPALSNLEDAL 418
GG++P +S L+D +
Sbjct: 450 PKNMPGGGAMPDMSALQDMM 469
>gi|312143704|ref|YP_003995150.1| signal recognition particle protein [Halanaerobium
hydrogeniformans]
gi|311904355|gb|ADQ14796.1| signal recognition particle protein [Halanaerobium
hydrogeniformans]
Length = 445
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/402 (49%), Positives = 279/402 (69%), Gaps = 7/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++ ALLEADV+ VV+RFV + E+AVG ++ + P QQ++KIV +E+ LMGG
Sbjct: 32 LKEVKMALLEADVNYKVVKRFVNKIEERAVGKEVMDSLTPAQQVIKIVNEEMQNLMGGSQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLA L +GK+ +LVA DVYRPAAI QL +L
Sbjct: 92 EEINISPDPPTIIMMVGLQGSGKTTSAGKLARMLSNKGKNPLLVAADVYRPAAIRQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE++ +PV++ G + P IAK + A N D +I+DTAGRL ID+ MM+EL+ +K
Sbjct: 152 GERLDLPVFSMGEDSDPVDIAKGSINFASTHNCDTIILDTAGRLHIDQEMMEELEGIKGA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P E+LLVVDAMTGQ+A + F+ + I G +LTK+DGD+RGGAALS+KE++GKPIK
Sbjct: 212 VDPDEILLVVDAMTGQDAVNVAQNFDKRLDIDGILLTKMDGDARGGAALSIKEITGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ DLEPF+PDRMA RILGMGDVL +EKA++ + +E A+ +++KI F
Sbjct: 272 FAGTGEKLADLEPFHPDRMASRILGMGDVLGLIEKAEKSIDKEKAKALEEKIRKNEFTLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG---KITPAQVREAEKSLKIMEAMIEAMTPEEREK 357
DF++Q V MG M ++GMIPGMG ++ QV +K L +EA+I +MTPEER K
Sbjct: 332 DFMEQMSQVRNMGPMDELLGMIPGMGGAKQLKNLQVD--DKQLDHIEAIISSMTPEERRK 389
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
P+++ S RRKR+AQ SG Q V++L+ Q Q + MK L
Sbjct: 390 PDIINGS--RRKRIAQGSGTKIQDVNRLLKQFRQTKKMMKKL 429
>gi|311068118|ref|YP_003973041.1| signal recognition particle protein [Bacillus atrophaeus 1942]
gi|419823901|ref|ZP_14347434.1| signal recognition particle protein [Bacillus atrophaeus C89]
gi|310868635|gb|ADP32110.1| signal recognition particle protein [Bacillus atrophaeus 1942]
gi|388471938|gb|EIM08728.1| signal recognition particle protein [Bacillus atrophaeus C89]
Length = 446
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 300/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQDVMQSLTPGQQVIKVVKEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIAVAKRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ +E+AK+++ D VI+DTAGRL ID +MDEL +VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVILDTAGRLHIDHELMDELANVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 IANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ + +F
Sbjct: 272 KFAGLGEKLDALEAFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT E+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVLEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+L+ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 DLINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMSKG 436
>gi|227432057|ref|ZP_03914071.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227352174|gb|EEJ42386.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 491
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/409 (49%), Positives = 273/409 (66%), Gaps = 6/409 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR IR ALLEADV+ V++FV V E+A G ++ G+ P QQ+VKIV DEL MG E
Sbjct: 32 MRGIRLALLEADVNYDTVKKFVANVREKASGTDIMEGLNPAQQIVKIVNDELTATMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PT+I++AGLQG GKTT AKLA LK + + +L+A D+YRPAAIDQL I
Sbjct: 92 VPLNKSPKIPTIIMMAGLQGAGKTTTVAKLAYKLKNENNARPLLIAADIYRPAAIDQLEI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG + +PV++ GT+V P I + GLE+A + D V +DTAGRLQID+ +M ELKD+
Sbjct: 152 LGRDLDIPVFSMGTDVNPRDIVRAGLEKAAENKNDYVFIDTAGRLQIDEELMQELKDIAE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAALS+++V+GKPI
Sbjct: 212 IADPDEILLTVDAMTGQNAAETAKGFSASLDLTGVVLTKLDGDTRGGAALSIRDVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E+ + +K+ FDF
Sbjct: 272 KFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEEQTKQLEKMRQNTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q + V MG M ++ MIPGM P A V K +EA++ +MTPEERE
Sbjct: 332 NDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNLDAKQFAHLEAIVGSMTPEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
P+L+ +P RR+R+A +G+ +V++++ Q QMR M GG
Sbjct: 391 PDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMNQATNGNFGG 437
>gi|450124877|ref|ZP_21867296.1| signal recognition particle protein [Streptococcus mutans U2A]
gi|449233422|gb|EMC32498.1| signal recognition particle protein [Streptococcus mutans U2A]
Length = 516
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/406 (47%), Positives = 282/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDSSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM + + V+ E + A++ +MTPEERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVSSMTPEERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 393 LL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|345880632|ref|ZP_08832178.1| signal recognition particle protein [Prevotella oulorum F0390]
gi|343922544|gb|EGV33244.1| signal recognition particle protein [Prevotella oulorum F0390]
Length = 448
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/420 (48%), Positives = 281/420 (66%), Gaps = 13/420 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V E+A+G+ ++ V+P Q +VKIV DEL LMGGE
Sbjct: 31 LKDVRRALLDADVNFKVAKNFTDKVKEKALGMNVLTAVKPGQLMVKIVHDELADLMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
++ + P +IL++GLQG GKTT S KLAN LK K+ K +LVA DVYRPAAI+QL +
Sbjct: 91 VDINL-EGHPAIILMSGLQGSGKTTFSGKLANLLKLKRNKKPLLVACDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+ VPVY IA+ ++EAK K DVVIVDTAGRL +D+ MM+E+ +K
Sbjct: 150 VGEQIQVPVYAEPENKDVVAIAQHAIQEAKAKGNDVVIVDTAGRLAVDEEMMNEIASLKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
L+P+E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAALS++ + KPI
Sbjct: 210 ALHPSETLFVVDAMTGQDAVNTAKEFNDRLDFDGVILTKLDGDTRGGAALSIRTIVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME L+ F+P+RMA RILGMGD++S VE+AQE +E+A+ +Q+KI FDF
Sbjct: 270 KFVGTGEKMEALDVFHPNRMADRILGMGDIVSLVERAQEQFDEEEAKRLQRKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK V + + +EA+I +MTP+ER PE
Sbjct: 330 NDFLGQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFVSIEAIIRSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGSLPAL 411
+L S RR+R+A+ SG Q+V++L+ Q Q R MK +M M+G +P +
Sbjct: 389 ILNTS--RRQRIAKGSGTNIQEVNKLIKQFDQTRKMMKMVTGNQMAGMMSRMKGMKIPGM 446
>gi|406670909|ref|ZP_11078154.1| signal recognition particle protein [Facklamia hominis CCUG 36813]
gi|405582425|gb|EKB56431.1| signal recognition particle protein [Facklamia hominis CCUG 36813]
Length = 486
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/408 (47%), Positives = 285/408 (69%), Gaps = 4/408 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V+++A+G ++ + P QQ+VKIV +EL LMGG+
Sbjct: 32 MREIRLALLEADVNFKVVKDFVKRVNDKALGSEVLSSLSPAQQVVKIVNEELTLLMGGDH 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQG-KSCMLVAGDVYRPAAIDQLVI 119
L + PTVI++ GLQG GKTT KLA Y++ QG K +LVAGDVYRPAAIDQL
Sbjct: 92 VPLNISTQPPTVIMMVGLQGAGKTTTVGKLAKYIQGQGLKKPLLVAGDVYRPAAIDQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ + V++ GTE P IAK L +AK + D VI+DTAGRL +++ +M+EL+++K
Sbjct: 152 IGQQLNLEVFSQGTEANPVDIAKNALAKAKIQGNDAVIIDTAGRLHVNQELMEELQNIKA 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P ++LL +DAMTGQ+A + FN ++ ITG ++TKLDGD+RGGAALS++ + KPI
Sbjct: 212 AVQPHDILLTIDAMTGQDAVNVAKAFNDDLDITGIVITKLDGDTRGGAALSIRSIINKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G+GE+++ LE FYPDRMAGRILGMGD+++ +EKAQ+ +E+A +M K+ A+FDF
Sbjct: 272 KFTGQGEQLDALELFYPDRMAGRILGMGDMMTLIEKAQQDFDEEEAAKMADKLKDASFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIEAMTPEEREKP 358
NDF+ Q V +MG + ++ +IPGM KI + +KS+ + A++++MTP ERE P
Sbjct: 332 NDFINQMDQVRKMGPIKDLMKLIPGMSKIPGLDDFDIDDKSMNRIRAVVQSMTPYERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
+++++S RRKR+A G+ ++QL+ Q Q R MK + GG
Sbjct: 392 DVISQS--RRKRIAAGCGQPLNDINQLIKQFNQSREMMKQMSNGRMGG 437
>gi|335996783|ref|ZP_08562700.1| signal recognition particle protein [Lactobacillus ruminis SPM0211]
gi|417974277|ref|ZP_12615098.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
gi|335351853|gb|EGM53344.1| signal recognition particle protein [Lactobacillus ruminis SPM0211]
gi|346329274|gb|EGX97572.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
Length = 481
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/417 (47%), Positives = 289/417 (69%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V +AVG ++ + P QQ+VKIV +EL+K+MG
Sbjct: 32 MREIRLALLEADVNFKVVKDFVKEVKNRAVGAEVLESLTPAQQIVKIVNEELIKVMGESA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L +K PTVI++ GLQG GKTT + KLA LKK+ + +++A DVYRPAA+DQL
Sbjct: 92 VSLNKSKKIPTVIMMVGLQGAGKTTTAGKLAYKLKKEENARPLMIAADVYRPAAVDQLKT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+ + VPV+ GT+V P +I +QG++ A+++ D VI+DTAGRLQID+ +M+EL +K
Sbjct: 152 VGKSIDVPVFELGTDVDPVEIVRQGMKLAEEQKNDYVIIDTAGRLQIDEKLMNELARIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LL VD+MTGQ A + FN + +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LTHPDEILLTVDSMTGQNAVEVAQGFNDTLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G+GE+M L+ FYP+RMA RILGMGD+L+ +EKAQ+ Q+ AEE+ K+ FDF
Sbjct: 272 KFIGQGEKMTALDVFYPERMASRILGMGDMLTLIEKAQQDFDQKKAEELADKMRENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDF++Q V MG + ++ MIPGM PA V+ K ++ +A++ +MTP ERE
Sbjct: 332 NDFIEQMEQVQNMGPIEDIMKMIPGMAN-NPALKNVKVDPKDIEHTKAIVYSMTPAERED 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P++L +P RR+R+A SG+ Q+V++++ Q QMR ++M M G+ + N+
Sbjct: 391 PDML--NPSRRRRIAAGSGRPIQEVNRMIKQFKQMR----DMMQKMTNGNFGGMENM 441
>gi|317502602|ref|ZP_07960723.1| signal recognition particle protein [Prevotella salivae DSM 15606]
gi|315666283|gb|EFV05829.1| signal recognition particle protein [Prevotella salivae DSM 15606]
Length = 449
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/420 (48%), Positives = 281/420 (66%), Gaps = 13/420 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL LMGG+
Sbjct: 31 LKDVRRALLDADVNFKVAKSFTDTVKQKAMGMNVLTAVKPGQLMVKIVHDELADLMGGDT 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
++ + P +IL++GLQG GKTT S KLAN LK K+ K +LVA DVYRPAAI QL +
Sbjct: 91 VDIQL-EGHPAIILMSGLQGSGKTTFSGKLANLLKNKRNKKPLLVACDVYRPAAIQQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+GVPVY+ IA + EAK K DVVIVDTAGRL +D+ MM+E+ ++K
Sbjct: 150 VGEQIGVPVYSEPESKDVITIANNAVREAKAKGYDVVIVDTAGRLAVDEEMMNEIANLKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
L+P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 ALHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME ++ F+P RMA RILGMGD++S VE+AQE +E+A +QKKI FDF
Sbjct: 270 KFVGTGEKMEAIDAFHPVRMADRILGMGDIVSLVERAQEQFDEEEARRLQKKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFLGQIEQIKKMGNLKDLASMIPGVGKAIK-DVDIDDNAFKGIEAIIKSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK--------NLMGVMEGGSLPAL 411
+L S RR+R+A+ SG Q+V++L+ Q Q R MK ++M M+G +P +
Sbjct: 389 ILNTS--RRQRIAKGSGTNIQEVNKLIKQFDQTRKMMKMVTGNQMASMMSRMKGMKMPGM 446
>gi|330717910|ref|ZP_08312510.1| signal recognition particle protein [Leuconostoc fallax KCTC 3537]
Length = 492
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/399 (50%), Positives = 276/399 (69%), Gaps = 6/399 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ V+RFV V +A G ++ G+ QQ+VKIV +EL K+MG E
Sbjct: 32 MREIRLALLEADVNYGTVKRFVANVRGKASGADILEGLDAPQQVVKIVNEELTKMMGDEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PT+I++AGLQG GKTT AKLA LK++ K+ +L+A D+YRPAAIDQL I
Sbjct: 92 VPLNKSPQIPTIIMMAGLQGAGKTTTVAKLAYKLKQENKARPLLIAADIYRPAAIDQLEI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+ + +PV++ GT+ P I + GLEEAK+ D V +DTAGRLQID+ +M ELKD+
Sbjct: 152 LGKDLDIPVFSLGTDTDPRDIVRAGLEEAKQHRNDYVFIDTAGRLQIDEVLMQELKDIAE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LL VDAMTGQ A F+ + +TG +LTKLDGD+RGGAALS+++V+GKPI
Sbjct: 212 IAHPDEILLTVDAMTGQNATETAKGFSESLDLTGVVLTKLDGDTRGGAALSIRDVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+ DL+ FYPDRMA RILGMGD+L+ +EKAQ+ + AE+ +K+ FDF
Sbjct: 272 KFVGQGEKPTDLDVFYPDRMASRILGMGDMLTLIEKAQKDFDEAAAEKQLEKLRENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q + V MG M ++ MIPGM P A + EK +EA++++MTP ERE
Sbjct: 332 NDFVAQLKQVQNMGPMEDILKMIPGMAN-NPALANLNVDEKQFIHLEAIVQSMTPAERED 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRM 396
P+L+ +P RR+R+A SG+ +V++++ Q QMR M
Sbjct: 391 PDLI--NPSRRRRLAAGSGRPIVEVNRMIKQFDQMRKMM 427
>gi|441499573|ref|ZP_20981753.1| Signal recognition particle, subunit Ffh SRP54 [Fulvivirga
imtechensis AK7]
gi|441436656|gb|ELR70020.1| Signal recognition particle, subunit Ffh SRP54 [Fulvivirga
imtechensis AK7]
Length = 458
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/414 (49%), Positives = 274/414 (66%), Gaps = 7/414 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++IRRAL++ADV+ V + + EQA+G ++ V P Q L KI D+L +LMGG
Sbjct: 46 VKEIRRALIDADVNYKVAKEVTDEIKEQALGRDVLTAVSPGQLLTKITNDQLTELMGGR- 104
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
E + + P VIL++GLQG GKTT S KLANYLK QG+ +L A D+YRPAAIDQL +L
Sbjct: 105 HEDIDIEGNPAVILISGLQGSGKTTFSGKLANYLKGQGRQVLLTACDIYRPAAIDQLKVL 164
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ V VY +IA ++ AK N +VIVDTAGRL +D+ MMDE+ +K+
Sbjct: 165 GEQIKVDVYAEPENKDAVKIANNAIKYAKDNNKKIVIVDTAGRLAVDEEMMDEITRLKQA 224
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
LNP+E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAA+S++ V KPIK
Sbjct: 225 LNPSETLFVVDSMTGQDAVNTAKAFNDRLNFDGVVLTKLDGDTRGGAAISIRRVVDKPIK 284
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+ GE+M+ ++ F+PDRMA RILGMGDV+S VEKAQ+ +E+A + KKI FDFN
Sbjct: 285 FISTGEKMDAIDKFHPDRMANRILGMGDVVSLVEKAQQTFDEEEARRLNKKIRKNQFDFN 344
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + +MG++ ++GMIPGMGK + + S K +EA+I +MT EERE+PEL
Sbjct: 345 DFLSQLEQIKKMGNIKDLMGMIPGMGKALKG-IDVDDDSFKPIEAIIRSMTNEEREQPEL 403
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS--LPALS 412
+ S RRKR+A SG + Q+V+ L+ Q M+ MK M M GG L AL+
Sbjct: 404 INGS--RRKRIATGSGTSVQEVNNLLKQFNDMKKLMKT-MNKMGGGKKGLAALN 454
>gi|373500244|ref|ZP_09590631.1| signal recognition particle protein [Prevotella micans F0438]
gi|371954375|gb|EHO72188.1| signal recognition particle protein [Prevotella micans F0438]
Length = 444
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/402 (50%), Positives = 281/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKTFTDNVKQKALGMDVLTAVKPGQLMVKIVHDELAELMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
L +P VIL++GLQG GKTT S KLA +LKK + K+ MLVA DVYRPAAI+QL +
Sbjct: 91 VGLKL-DGKPAVILMSGLQGSGKTTFSGKLAQFLKKKEHKNPMLVACDVYRPAAIEQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+QV V VY+ K ++IA+ ++EAK K D+VI+DTAGRL +D+ MM+E++ +K
Sbjct: 150 VGQQVNVSVYSEPENKKVNEIAENAIKEAKVKGNDLVIIDTAGRLAVDEEMMNEIESLKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 HIHPDETLFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME L+ F+P RMA RILGMGDV+S VE+AQE +E+A+++QKKI FDF
Sbjct: 270 KFVGTGEKMEALDTFHPSRMADRILGMGDVVSLVERAQEQFDEEEAKKLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF KQ + + +MG++ + MIPG+GK V + S K +EA+I++MTP+ER PE
Sbjct: 330 NDFYKQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNSFKSVEAIIQSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
LL S RR+R+A+ SG +V++L+ Q Q R MK + G
Sbjct: 389 LLNTS--RRQRIAKGSGTNILEVNRLIKQFDQTRKMMKMVTG 428
>gi|238852592|ref|ZP_04643002.1| signal recognition particle protein [Lactobacillus gasseri 202-4]
gi|238834738|gb|EEQ26965.1| signal recognition particle protein [Lactobacillus gasseri 202-4]
Length = 476
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/416 (48%), Positives = 286/416 (68%), Gaps = 11/416 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
R+IR ALLEADV+ VV+ F++ + ++A+G + + P QQ++KIV DEL K+MG E
Sbjct: 33 REIRLALLEADVNFKVVKDFIKKIKKEALGKEVQESLNPGQQIIKIVDDELTKMMGEEAV 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
L ++ PT+I++ GLQG GKTT KLANYL K K+ +L+AGD+YRPAAIDQL +
Sbjct: 93 SLNKSQHIPTIIMMVGLQGTGKTTTVGKLANYLMKNEKARPLLIAGDIYRPAAIDQLKQI 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPVY+ + ++I K GLEEA K D V++DTAGRL+ID+ +MDELK V V
Sbjct: 153 GQQLNVPVYSEDNQ-NVAEIVKHGLEEADKNKNDYVLIDTAGRLEIDEQLMDELKRVTAV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P LLVVDAMTGQ A + FN ++ +TG ILTKLDGD+RGGAALS++ V+G PI
Sbjct: 212 AHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIILTKLDGDTRGGAALSIRAVTGLPII 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M +K+ FDFN
Sbjct: 272 FTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMAEKMRENTFDFN 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++ +MTPEERE P
Sbjct: 332 DFIDQMDQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQISHLKAIVYSMTPEERENP 390
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
++L +P RR+R+A SG++ +V++++ Q Q K +M M G + +NL
Sbjct: 391 DIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGDMGEFANL 440
>gi|390454100|ref|ZP_10239628.1| signal recognition (srp) component [Paenibacillus peoriae KCTC
3763]
Length = 458
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/418 (47%), Positives = 285/418 (68%), Gaps = 5/418 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F+ V E++VG ++ P ++ IV EL +LMGG
Sbjct: 32 MREVRLALLEADVNFKVVKDFIAKVKEKSVGKEVMDSFTPGMVIIDIVNKELTELMGGSQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L A PTVI++ GLQG GKTT S KLA L+KQ +LVAGD+YRPAAI QL IL
Sbjct: 92 AKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKLLQKQNHRPLLVAGDIYRPAAIKQLQIL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ PV+T G + P IAKQGL+ AK D VI+DTAGRL +D+ +M+EL+ +
Sbjct: 152 GEQINAPVFTLGDQTSPVDIAKQGLQHAKDNGNDYVIIDTAGRLHVDEELMEELRQIHAN 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+MTGQ+A + FN + +TG +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 VKPDEVLLVVDSMTGQDAVNVAEHFNSSLELTGVVLTKLDGDTRGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ +EPF+P+RMA RILGMGD+LS +EKAQ + + A+EM++K+ +A F F
Sbjct: 272 FATLGEKLDAMEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEMERKMRNAEFTFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V ++G + +++ MIPGMG + + ++ +K + +EA++ +MT +E++ P+
Sbjct: 332 DFLEQMDQVKKLGPIDQILDMIPGMGNMKQMKDIKVDDKQMGRIEAIVHSMTTQEKQNPD 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALSNLE 415
++ S RRKR+A SG + +V++L+ Q +MR MK +M +GG AL L+
Sbjct: 392 MINHS--RRKRIAVGSGTSLAEVNRLIKQFDEMRRMMKQFSDMMGPKGGKNKALKQLK 447
>gi|387879550|ref|YP_006309853.1| signal recognition particle protein [Streptococcus parasanguinis
FW213]
gi|414155538|ref|ZP_11411850.1| signal recognition particle protein [Streptococcus sp. F0442]
gi|386793003|gb|AFJ26038.1| signal recognition particle protein [Streptococcus parasanguinis
FW213]
gi|410873511|gb|EKS21446.1| signal recognition particle protein [Streptococcus sp. F0442]
Length = 523
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/407 (47%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKRVRERAVGHEVIETLNPAQQIVKIVDEELTAILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
+++ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 DIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M EL+DVK +
Sbjct: 153 GQQINVPVFSLGTEVPAVEIVRQGLEQARANHNDYVLIDTAGRLQIDEKLMGELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 AEPNEILLVVDAMIGQEAANVAREFNEQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+GRILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSGRILGMGDMLTLIEKASQEYDEKRSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM PA ++ E+ + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNLKVDEREIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG + +V++ + Q + M+ GV+ G
Sbjct: 392 DLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|386344584|ref|YP_006040748.1| signal recognition particle protein [Streptococcus thermophilus JIM
8232]
gi|339278045|emb|CCC19793.1| signal recognition particle [Streptococcus thermophilus JIM 8232]
Length = 520
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 281/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + QQ++KIV +EL +++G E S
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDASQQIIKIVNEELTEILGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K+Q M++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I + GLE+A+ D V++DTAGRLQID+ +M EL+D+K
Sbjct: 153 GQQINVPVFDMGTETPAVEIVRNGLEQARANKNDYVLIDTAGRLQIDETLMKELRDIKDF 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++ KPIK
Sbjct: 213 AHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREITDKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM P A V+ EK + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPALANVKVDEKQIARKRAIVLSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--TPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|450175644|ref|ZP_21885302.1| signal recognition particle protein [Streptococcus mutans SM1]
gi|449246445|gb|EMC44749.1| signal recognition particle protein [Streptococcus mutans SM1]
Length = 516
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/406 (47%), Positives = 282/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDSSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM + + V+ E + A++ +MTPEERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMANNSALSNVKVDEDEIARKRAIVSSMTPEERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 393 LL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|319947050|ref|ZP_08021284.1| signal recognition particle protein [Streptococcus australis ATCC
700641]
gi|417920737|ref|ZP_12564237.1| signal recognition particle protein [Streptococcus australis ATCC
700641]
gi|319747098|gb|EFV99357.1| signal recognition particle protein [Streptococcus australis ATCC
700641]
gi|342828165|gb|EGU62541.1| signal recognition particle protein [Streptococcus australis ATCC
700641]
Length = 523
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/407 (47%), Positives = 287/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKRVRERAVGHEVIETLNPAQQIVKIVDEELTAILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
+++ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 DIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M EL+DVK +
Sbjct: 153 GQQINVPVFSLGTEVPAVEIVRQGLEQARANHNDYVLIDTAGRLQIDEKLMGELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 AEPNEILLVVDAMIGQEAANVAREFNEQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+GRILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSGRILGMGDMLTLIEKASQEYDEKRSIELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM PA ++ E+ + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNLKVDEREIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG + +V++ + Q + M+ GV+ G
Sbjct: 392 DLL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKQMMQ---GVLSG 433
>gi|449968858|ref|ZP_21812871.1| signal recognition particle protein [Streptococcus mutans 2VS1]
gi|450028539|ref|ZP_21832245.1| signal recognition particle protein [Streptococcus mutans G123]
gi|450056695|ref|ZP_21842180.1| signal recognition particle protein [Streptococcus mutans NLML4]
gi|450066939|ref|ZP_21846271.1| signal recognition particle protein [Streptococcus mutans NLML9]
gi|450092298|ref|ZP_21855923.1| signal recognition particle protein [Streptococcus mutans W6]
gi|450147551|ref|ZP_21875136.1| signal recognition particle protein [Streptococcus mutans 14D]
gi|449174709|gb|EMB77184.1| signal recognition particle protein [Streptococcus mutans 2VS1]
gi|449195624|gb|EMB96938.1| signal recognition particle protein [Streptococcus mutans G123]
gi|449206440|gb|EMC07143.1| signal recognition particle protein [Streptococcus mutans NLML4]
gi|449208373|gb|EMC08968.1| signal recognition particle protein [Streptococcus mutans NLML9]
gi|449218645|gb|EMC18650.1| signal recognition particle protein [Streptococcus mutans W6]
gi|449236954|gb|EMC35853.1| signal recognition particle protein [Streptococcus mutans 14D]
Length = 516
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/407 (47%), Positives = 282/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ G E +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGIEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTPEERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|347758274|ref|YP_004865836.1| signal recognition particle protein [Micavibrio aeruginosavorus
ARL-13]
gi|347590792|gb|AEP09834.1| signal recognition particle protein [Micavibrio aeruginosavorus
ARL-13]
Length = 497
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/398 (51%), Positives = 282/398 (70%), Gaps = 8/398 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+IR ALLEADV+LPVV++FV+ V E+AVG +IR V P QQ+VKIV D LV ++G +
Sbjct: 31 LREIRVALLEADVALPVVKQFVETVRERAVGQEVIRSVTPAQQVVKIVHDALVDMLGSDT 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
++L FA + P L+ GLQG GKTT SAK+ +L KQ K ++ + DVYRPAA +QL
Sbjct: 91 TDLNFA-TPPCAYLMVGLQGSGKTTTSAKIGKFLTDKQRKKVLMASLDVYRPAAQEQLAQ 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG Q GV KP IA + ++ A+K+ DVVI+DTAGRL ID+AMM E K V+
Sbjct: 150 LGRQTGVATLPVIEGQKPVDIALRAMDTARKEGYDVVILDTAGRLSIDEAMMAEAKAVRD 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NPTE LLVVDAMTGQ+A + F+ ++ +TG +LT++DGD+RGGAALS+K V+GKPI
Sbjct: 210 TINPTETLLVVDAMTGQDAVNTASAFDAQVAVTGIVLTRVDGDARGGAALSMKAVTGKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
KL+G GE+ + LE F+PDR+AGRILGMGDV+S VEKA E + QEDA +M +K +FDF
Sbjct: 270 KLIGVGEKWDALEQFHPDRIAGRILGMGDVVSLVEKAVETIDQEDAMKMAQKFQKGDFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTPEERE 356
ND L Q R + +MG +S ++ M+PG+G++ +Q+ A + +LK EA+I +MTP ER
Sbjct: 330 NDLLSQMRQMQKMGGVSSLVKMLPGLGQMA-SQLENANIDDGALKKQEAIILSMTPAERS 388
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRV 394
+PELL S R++R+A SG T Q +++L QL QM+
Sbjct: 389 RPELLNAS--RKRRIATGSGTTVQDINKLHKQLQQMQT 424
>gi|260890999|ref|ZP_05902262.1| signal recognition particle protein [Leptotrichia hofstadii F0254]
gi|260859026|gb|EEX73526.1| signal recognition particle protein [Leptotrichia hofstadii F0254]
Length = 445
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/397 (50%), Positives = 279/397 (70%), Gaps = 2/397 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ V + FV + E+A+G +I GV P QQ VKIV DELV+++GG
Sbjct: 31 LREVRLALLEADVNYSVAKNFVAKIREKALGEQVISGVNPTQQFVKIVNDELVEVLGGSN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ A PTV++L+GLQG GKTT S KLA +LK +G+ L+ DVYRPAA QL +L
Sbjct: 91 VSIAKADKNPTVVMLSGLQGAGKTTFSGKLAKHLKSKGEKPFLIGADVYRPAAKKQLKVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQV VPV+T +I KQG+E +K ++ VI+DTAGRL ID+ +M EL+D+K
Sbjct: 151 GEQVKVPVFTIDESTDALEIVKQGIEASKTEHATYVIIDTAGRLHIDEQLMSELQDIKDS 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD MTGQ+A + FN ++ ITG +LTKLDGD+RGGAALSVKEV+GKPIK
Sbjct: 211 FNPNEILLVVDGMTGQDAVNVAKEFNEQLDITGVVLTKLDGDTRGGAALSVKEVAGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+ GE+++D+ PF+PDR+A RILGMGDV+S VEKAQE + +++A++M++K FDF
Sbjct: 271 FISEGEKLDDIAPFHPDRLASRILGMGDVVSLVEKAQEAIDEKEAKKMEEKFRKNQFDFE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFLKQ + + +MGS++ ++ MIPG+ + + AEK +K +EA+I +MT +ER P+L
Sbjct: 331 DFLKQFKMIRKMGSIAGIMKMIPGV-DTSMIDMGMAEKEMKKVEAIIFSMTVQERRDPKL 389
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
L R+ R+A+ SG V++L+ Q QM+ MK
Sbjct: 390 LKNGS-RKMRIAKGSGVQVNDVNKLIKQFEQMKQMMK 425
>gi|363583065|ref|ZP_09315875.1| signal recognition particle protein [Flavobacteriaceae bacterium
HQM9]
Length = 442
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/390 (48%), Positives = 275/390 (70%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRAL++ADV+ + + F + V E+A+G +++ ++P Q +VK+V+DEL LMGG+
Sbjct: 31 LKEVRRALVDADVNYKIAKEFTKRVKEKAIGQDVLKSLKPGQLMVKLVKDELTDLMGGD- 89
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E + P++IL++GLQG GKTT S KLA +LK K+ K +LVA DVYRPAAIDQL +
Sbjct: 90 AEGINLSGTPSIILMSGLQGSGKTTFSGKLAQFLKNKKTKKPLLVACDVYRPAAIDQLHV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+G+ VY+ P +A+ G+ AK +VVIVDTAGRL +D+ MM+E+ ++ +
Sbjct: 150 VGDQIGIEVYSDKENNDPVALARAGVAHAKANGCNVVIVDTAGRLAVDEQMMNEISNIHK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP+E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAALS+K V KPI
Sbjct: 210 AINPSETLFVVDSMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAALSIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ FYP RMA RILGMGDV+S VEKAQE +E+A ++QKKI F F
Sbjct: 270 KFIGTGEKMEAIDIFYPSRMADRILGMGDVVSLVEKAQEQFDEEEARKLQKKIAKNQFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFL Q + + +MG++ ++GMIPGMGK+ + + K +EA+I +MTPEER P+
Sbjct: 330 DDFLSQIQQIKKMGNIKDLMGMIPGMGKMVKDV-DVDDDAFKHIEAIIHSMTPEERANPQ 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
L+ S R+KR+ + SG + QQV+QL+ Q
Sbjct: 389 LINAS--RKKRIGKGSGTSIQQVNQLLKQF 416
>gi|402834421|ref|ZP_10883023.1| signal recognition particle protein [Selenomonas sp. CM52]
gi|402278039|gb|EJU27105.1| signal recognition particle protein [Selenomonas sp. CM52]
Length = 456
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/393 (51%), Positives = 276/393 (70%), Gaps = 6/393 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ V E+AVG ++ + P Q +VKIV +EL +LMGG
Sbjct: 32 MREVRMALLEADVNFKVVKDFIKKVKERAVGQDVLDTLTPAQVVVKIVDEELTELMGGTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L + PTVI++AGLQG GKTT + KL LKKQGK +LVA D+YRPAA+ QL +L
Sbjct: 92 SRLNISSVPPTVIMMAGLQGAGKTTSAGKLGLSLKKQGKKPLLVAADIYRPAAVKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+G+PV++ IA+ +E A+ DVVI+DTAGRL ID+ +M ELKD+K
Sbjct: 152 GEQLGIPVFSMPQGTDAVTIARSSIEHARSHINDVVIIDTAGRLHIDEKLMQELKDIKAD 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +FN +GI G +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 VKPHEILLVVDAMTGQDAVNVAESFNEGLGIDGVVLTKLDGDARGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPF+PDRMA RILGMGDVLS +EKAQ E+A++M+KK+ A+F +
Sbjct: 272 FVGMGEKLEALEPFHPDRMASRILGMGDVLSLIEKAQSTFDAEEAKKMEKKLRKADFTLD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEAMIEAMTPEERE 356
DFL Q + V ++GS +++GMIPGMG ++ + K ++ +EA+I++MTP+ER
Sbjct: 332 DFLAQMQKVRKLGSFEQILGMIPGMGGLKKQLQGQDIDLNGKEVRRIEAIIKSMTPKERA 391
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
++ S RRKR+A SG Q V++L+ Q
Sbjct: 392 DISIINGS--RRKRIALGSGTRVQDVNKLLKQF 422
>gi|327404872|ref|YP_004345710.1| signal recognition particle subunit FFH/SRP54 (srp54) [Fluviicola
taffensis DSM 16823]
gi|327320380|gb|AEA44872.1| signal recognition particle subunit FFH/SRP54 (srp54) [Fluviicola
taffensis DSM 16823]
Length = 449
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/398 (50%), Positives = 274/398 (68%), Gaps = 5/398 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL+ADV+ + F V ++A+G ++ + P Q ++KI +ELV+LMGG
Sbjct: 31 LKEVRRALLDADVNFKTAKDFTVRVKDKAMGENVLTAISPSQLMIKICHEELVELMGGNE 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
SE+ + P VIL++GLQG GKTT S KLANYL+ K+ K +LVA DVYRPAAIDQL +
Sbjct: 91 SEIQI-QGTPGVILMSGLQGSGKTTFSGKLANYLQTKKNKKPLLVACDVYRPAAIDQLHV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+G+ VY+ E P +IA + A+ K +VVIVDTAGRL +D+AMMDE+ VK+
Sbjct: 150 LGEQLGIEVYSNKEEKDPVKIATDAVIYARSKGFNVVIVDTAGRLAVDEAMMDEIARVKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NPTE L VVD+MTGQ+A FN I G +LTKLDGD+RGGAALS+K + KPI
Sbjct: 210 AINPTETLFVVDSMTGQDAVNTAKAFNDRINFDGVVLTKLDGDTRGGAALSIKSIVDKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ L+ FYP RMA RILGMGDV+S VE+AQE +E+A ++QK+I FDF
Sbjct: 270 KFVGTGEKMDALDVFYPKRMADRILGMGDVVSLVERAQEQFNEEEARKLQKRIQKDQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + + +MG++ ++GMIPGMGK V + + K +EA+I +MTP+ER P
Sbjct: 330 NDFLGQIQQIKKMGNVKDLMGMIPGMGKAVK-DVDIQDDAFKHIEAIIFSMTPKERANPS 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
L+ + R+ R+A SG Q+V++L+ Q + MK
Sbjct: 389 LM--NGTRKTRIANGSGTNIQEVNKLLKQFEDTKKMMK 424
>gi|302392419|ref|YP_003828239.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Acetohalobium arabaticum DSM 5501]
gi|302204496|gb|ADL13174.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Acetohalobium arabaticum DSM 5501]
Length = 453
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 279/400 (69%), Gaps = 3/400 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ ALLEADV+ VV+ F+ + E+AVG ++ + P QQ++KIV +EL LMGG
Sbjct: 32 LREVKLALLEADVNFKVVKNFISDIEERAVGKEVMDSLTPAQQVIKIVNEELTDLMGGTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L A PTVI+L GLQG GKTT KLA +L K G+ +LVAGDVYRPAAI QL +L
Sbjct: 92 SKLSIASDPPTVIMLVGLQGAGKTTTVGKLAKHLHKNGRRPLLVAGDVYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE++ PV++ G + P IAK G+ A+ DVVI+DTAGRL ID+ +M ELKD+K
Sbjct: 152 GERLDQPVFSMGDKQDPVDIAKAGVSHAESNGRDVVIIDTAGRLHIDEELMGELKDIKAA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+LLVVDAMTGQ+A + +F+ +G+ G LTKLDGD+RGGAALS+++V+G+PIK
Sbjct: 212 VNPQEILLVVDAMTGQDAVNVAESFDDALGVDGITLTKLDGDARGGAALSIRKVTGRPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++DLEPF+PDRMA RILGMGD+LS +EKA+E + E A+E+++K+ F +
Sbjct: 272 FVGTGEKLDDLEPFHPDRMASRILGMGDMLSLIEKAEENIDAEKAKELEEKLRKEEFTLD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL Q + MG + +++ MIPGMGKI + E+ L +EA+I +MT EE+ P
Sbjct: 332 DFLDQMSQIRNMGPLDQIMDMIPGMGKIKQLDNLDMGEEHLDQIEAIISSMTTEEKRDPS 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ S RR+R+A SG Q V++L+ Q Q + MK L
Sbjct: 392 IINGS--RRRRIANGSGTEVQDVNRLLKQFKQAQKMMKQL 429
>gi|78188776|ref|YP_379114.1| Signal recognition particle protein [Chlorobium chlorochromatii
CaD3]
gi|78170975|gb|ABB28071.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
chlorochromatii CaD3]
Length = 451
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/398 (52%), Positives = 276/398 (69%), Gaps = 5/398 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDI+RALL ADV+ V ++ ++ + E+++G +I+ V P Q +VKIV DEL +LMGGE
Sbjct: 33 MRDIKRALLAADVNYKVAKKLIEDIREKSLGEEVIKSVSPAQMIVKIVYDELTELMGGEQ 92
Query: 61 SELVFA-KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
L + K P +I++AGLQG GKTT AKLA L+K GK+ ML+A DVYRPAA+DQL
Sbjct: 93 KPLNLSPKKLPAIIMVAGLQGSGKTTFCAKLALRLRKNGKNPMLIAADVYRPAAVDQLKA 152
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQV VPV++ E + A QGLE AK DVVIVDTAGRLQID+AMM E + +K
Sbjct: 153 LGEQVEVPVFSV-DEKDAMKAALQGLEAAKAAAKDVVIVDTAGRLQIDQAMMAEAEALKN 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
L P E+L VVD+M GQEA FN + G +LTKLDGD+RGGAALS+++V KPI
Sbjct: 212 ALKPDELLFVVDSMMGQEAVNTAKAFNDRLDFDGVVLTKLDGDARGGAALSIRQVVEKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+++DL+ FYPDRMA RILGMGD++SFVEKAQE + + A EMQKK+M FD
Sbjct: 272 KFISIGEKVDDLDIFYPDRMAQRILGMGDIISFVEKAQENLDLDKAIEMQKKLMKNEFDL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MGS+ +I M+PG+ K+ P Q E K +EAMI +MT EER PE
Sbjct: 332 NDFFDQLQQLKKMGSIQGLIEMVPGLNKMVPKQELE-NLDFKPIEAMISSMTKEERSNPE 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
++ S RR+R+A+ SG+ Q+V+ L+ Q +M+ MK
Sbjct: 391 MINGS--RRQRIARGSGRKVQEVNLLLKQFGEMKKMMK 426
>gi|375256538|ref|YP_005015705.1| signal recognition particle protein [Tannerella forsythia ATCC
43037]
gi|363408351|gb|AEW22037.1| signal recognition particle protein [Tannerella forsythia ATCC
43037]
Length = 442
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/409 (49%), Positives = 277/409 (67%), Gaps = 5/409 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V ++F V +A+G ++ ++P Q +VKIV DEL LMGG
Sbjct: 31 LKDVRRALLDADVNYKVAKQFTDTVKAKAMGQDVLTSLKPGQLMVKIVHDELAALMGGTA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E S P+VIL+AGLQG GKTT S KLAN LK K+GK+ +LVA DVYRPAAIDQL +
Sbjct: 91 AEFNLTGS-PSVILMAGLQGSGKTTFSGKLANMLKSKRGKNPLLVACDVYRPAAIDQLYV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+GVPVY+ P IA + EAKK D+VIVDTAGRL ID+ MM E+ +K+
Sbjct: 150 LGEQIGVPVYSERENKNPVDIALHAILEAKKTGRDLVIVDTAGRLAIDEQMMAEIAAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+L VVD+MTGQ+A FN + +G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AIRPNEILFVVDSMTGQDAVNTAKEFNDRLDFSGVVLTKLDGDTRGGAALSIRTVVDKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+M+ L+ F+P+RMA RILGMGDV+S VE+AQE + +A +QKK+ FDF
Sbjct: 270 KFIGTGEKMDALDVFHPERMADRILGMGDVVSLVERAQEQYDEAEARRIQKKLAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + + +MG++ + MIPG+GK + E + K +EA+I +MTP+ER P
Sbjct: 330 NDFLGQIQQIKKMGNLKDLASMIPGVGKALK-NIDIDENAFKGIEAIIYSMTPQERTNPS 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 408
+L S RR+R+A SG + Q V++L+ Q + R M+ + V G +
Sbjct: 389 ILNGS--RRQRIAAGSGTSVQDVNKLIKQFDETRKMMRMITTVKPGSRM 435
>gi|50914250|ref|YP_060222.1| signal recognition particle subunit FFH [Streptococcus pyogenes
MGAS10394]
gi|50903324|gb|AAT87039.1| signal recognition particle subunit FFH [Streptococcus pyogenes
MGAS10394]
Length = 522
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 284/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P +Q++KIV +EL ++G E +
Sbjct: 35 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTKQILKIVNEELTSILGSETA 94
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 95 EIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEEDARPLMIAADIYRPAAIDQLKTL 154
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 155 GQQINVPVFDMGTDHSAVDIVRKGLEQARENHNDYVLIDTAGRLQIDEKLMEELRDVKAL 214
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 215 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 274
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GER+ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 275 FTGTGERITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 334
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 335 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 394
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 395 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|19746132|ref|NP_607268.1| signal recognition particle -inhibited division protein
[Streptococcus pyogenes MGAS8232]
gi|19748308|gb|AAL97767.1| putative signal recognition particle -inhibited division protein
[Streptococcus pyogenes MGAS8232]
Length = 520
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 284/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P +Q++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTKQILKIVNEELTSILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEEDARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQINVPVFDMGTDHSAVDIVRKGLEQARENHNDYVLIDTAGRLQIDEKLMEELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GER+ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGERITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|213962455|ref|ZP_03390717.1| signal recognition particle protein [Capnocytophaga sputigena
Capno]
gi|213954781|gb|EEB66101.1| signal recognition particle protein [Capnocytophaga sputigena
Capno]
Length = 442
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/390 (50%), Positives = 278/390 (71%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL+ADV+ + + F V E+A+G ++ ++P Q +VKIV+DEL +LMGG+
Sbjct: 31 LKEVRRALLDADVNYKIAKDFTNNVKEKALGQQVLTSLQPGQLMVKIVKDELTQLMGGDA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSC-MLVAGDVYRPAAIDQLVI 119
+ + + PT+IL++GLQG GKTT S KLANYLK + +LVA DVYRPAAIDQL I
Sbjct: 91 AGINLS-GNPTIILMSGLQGSGKTTFSGKLANYLKNKKNKKPLLVACDVYRPAAIDQLHI 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGVPV++ P IA++G++ AK+ +++VVIVDTAGRL +D+ MM E+ ++ +
Sbjct: 150 VGEQVGVPVFSDKGNSNPVDIAQKGVQYAKENHLNVVIVDTAGRLAVDEQMMTEISNIHK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
LNP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+++K V KPI
Sbjct: 210 ALNPQETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAITIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ ++ FYP+RMA RILGMGDV+S VE+AQE +E A ++QKKI F F
Sbjct: 270 KFVGTGEKMDAIDVFYPERMADRILGMGDVVSLVERAQEQFDEEQARKLQKKIAKNQFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +MTP+ER P
Sbjct: 330 DDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHSMTPKERSTPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
++ S R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 389 IIDLS--RKKRIAKGSGRDIQEVNQLMKQF 416
>gi|320354484|ref|YP_004195823.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfobulbus propionicus DSM 2032]
gi|320122986|gb|ADW18532.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfobulbus propionicus DSM 2032]
Length = 449
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/412 (49%), Positives = 288/412 (69%), Gaps = 10/412 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M ++R ALLEADV+ VV+ F+ +V+E+A+G ++ + P QQ+VK+V DELV+L+G +
Sbjct: 31 MGEVRTALLEADVNFGVVKEFIASVTEKAIGREVLTSLSPGQQVVKVVHDELVELLGSQA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L +P VI+LAGLQG GKTT +AKLA LK++G++ LV DVYRPAAI+QL +L
Sbjct: 91 EPLKLDGRQPVVIMLAGLQGSGKTTTAAKLAKQLKEKGRAPFLVPADVYRPAAIEQLHVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQVGVPVY + TE KP IA+Q + EA+ + D VI+DTAGRL +D+A+M EL+++ R
Sbjct: 151 GEQVGVPVYASTTEQKPVDIARQAVAEARTGHYDTVIIDTAGRLHVDEALMAELQEISRT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ EVL V DAMTGQ+A + FN ++ ITG +LTK++GD+RGGAALSVK+V+GKPIK
Sbjct: 211 VPLAEVLFVADAMTGQDAVTVADKFNTDLEITGVVLTKMEGDARGGAALSVKKVTGKPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE +E LE F+PDR A RILGMGDVLS +EKA+ V+ Q++AE + KKI F
Sbjct: 271 FVGVGESVEALEVFHPDRAASRILGMGDVLSLIEKAEAVVDQKNAERLAKKIQKNAFTLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA----EKSLKIMEAMIEAMTPEERE 356
DFL Q + + +MG++ +++GMIPG+ K+ Q+++A +K L EA+I +MT +ER
Sbjct: 331 DFLDQIQQIKKMGTLEQIMGMIPGINKLK--QLKDAPKPDQKELVKTEAIIRSMTLKERR 388
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL--MGVMEGG 406
++ S RR R+A SG + +V++++ M MKNL G++ GG
Sbjct: 389 NHRIIDAS--RRVRIANGSGTSVAEVNRVLKSYTMMLKMMKNLKGKGIVSGG 438
>gi|450105269|ref|ZP_21859781.1| signal recognition particle protein [Streptococcus mutans SF14]
gi|449224870|gb|EMC24494.1| signal recognition particle protein [Streptococcus mutans SF14]
Length = 516
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/407 (47%), Positives = 282/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I QGL +AK+ D V++DTAGRLQID+ +M EL+D+K +
Sbjct: 153 GQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDYVLIDTAGRLQIDEKLMTELRDIKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRKNSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A V+ E + A++ +MTP ERE P
Sbjct: 333 DFIEQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDEGEIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T V++ + Q + K + GVM G
Sbjct: 392 DLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAK---KMMQGVMSG 433
>gi|358067367|ref|ZP_09153848.1| signal recognition particle protein [Johnsonella ignava ATCC 51276]
gi|356694539|gb|EHI56199.1| signal recognition particle protein [Johnsonella ignava ATCC 51276]
Length = 457
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/405 (47%), Positives = 286/405 (70%), Gaps = 5/405 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++R ALLEADV+ VV++FV + E+AVG ++ + P Q ++KIV +EL+KL+G E
Sbjct: 32 LKEVRMALLEADVNFKVVKKFVADIQERAVGTEVLESLTPAQHVIKIVNEELIKLIGSET 91
Query: 61 SELVFA-KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
E++ + TVI++AGLQG GKTT +AKLA LK +G + +LVA DVYRPAA++QL I
Sbjct: 92 KEIIMQPQGEITVIMMAGLQGAGKTTTAAKLAGKLKSKGNTPLLVACDVYRPAAVEQLKI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
GE+ +PV++ G + P IAK LE AKK + +++I+DTAGRL ID+ MMDEL D+K+
Sbjct: 152 NGEKQNIPVFSMGNNLSPVDIAKAALEHAKKNHNNILILDTAGRLHIDEKMMDELADIKK 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+N + LLVVDAMTGQ+A + +FN +I + G I+TKLDGD+RGGAALS+K V+GKPI
Sbjct: 212 NINVNQTLLVVDAMTGQDAVNVAESFNDKIELDGIIVTKLDGDTRGGAALSIKAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
VG GE++ DLE F+PDRMAGRILGMGD+LS +EKA+ M + +++ +K+ A FDF
Sbjct: 272 LYVGMGEKLSDLEVFHPDRMAGRILGMGDILSLIEKAEAEMDADKVKQISRKLQKAEFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKIT-PA-QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL+Q + + +MG + ++ M+PG+G + PA ++ EK +EA+I +M +ER
Sbjct: 332 NDFLEQLQQIKKMGDLGGILNMLPGIGGMNLPAGGLQPDEKQFSRVEAIILSMNVKERTD 391
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
P +L +P R+ R+A+ +G +V+++V Q QM+ MK G+
Sbjct: 392 PAVL--NPSRKNRIAKGAGVNISEVNRIVKQFEQMKKMMKQFSGM 434
>gi|116629442|ref|YP_814614.1| Signal recognition particle GTPase [Lactobacillus gasseri ATCC
33323]
gi|311110910|ref|ZP_07712307.1| signal recognition particle protein [Lactobacillus gasseri MV-22]
gi|420147406|ref|ZP_14654682.1| Signal recognition particle protein [Lactobacillus gasseri CECT
5714]
gi|116095024|gb|ABJ60176.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus gasseri ATCC 33323]
gi|311066064|gb|EFQ46404.1| signal recognition particle protein [Lactobacillus gasseri MV-22]
gi|398401407|gb|EJN54909.1| Signal recognition particle protein [Lactobacillus gasseri CECT
5714]
Length = 476
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/416 (48%), Positives = 286/416 (68%), Gaps = 11/416 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
R+IR ALLEADV+ VV+ F++ + ++A+G + + P QQ++KIV DEL K+MG E
Sbjct: 33 REIRLALLEADVNFKVVKDFIKKIKKEALGKEVQESLNPGQQIIKIVDDELTKMMGEEAV 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
L ++ PT+I++ GLQG GKTT KLANYL K K+ +L+AGD+YRPAAIDQL +
Sbjct: 93 SLNKSQHIPTIIMMVGLQGTGKTTTVGKLANYLMKNEKARPLLIAGDIYRPAAIDQLKQI 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPVY+ + ++I K GLEEA K D V++DTAGRL+ID+ +MDELK V V
Sbjct: 153 GQQLNVPVYSEDNQ-DVAEIVKHGLEEADKNKNDYVLIDTAGRLEIDEQLMDELKRVTAV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P LLVVDAMTGQ A + FN ++ +TG ILTKLDGD+RGGAALS++ V+G PI
Sbjct: 212 AHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIILTKLDGDTRGGAALSIRAVTGLPII 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M +K+ FDFN
Sbjct: 272 FTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMAEKMRENTFDFN 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++ +MTPEERE P
Sbjct: 332 DFIDQMDQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQISHIKAIVYSMTPEERENP 390
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
++L +P RR+R+A SG++ +V++++ Q Q K +M M G + +NL
Sbjct: 391 DIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGDMGEFANL 440
>gi|429752041|ref|ZP_19284928.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
326 str. F0382]
gi|429178225|gb|EKY19508.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
326 str. F0382]
Length = 444
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/390 (49%), Positives = 279/390 (71%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL+ADV+ + + F V E+A+G ++ ++P Q +VKIV+DEL +LMGG+
Sbjct: 31 LKEVRRALLDADVNYKIAKDFTNNVKEKALGQQVLTTLQPGQLMVKIVKDELTQLMGGDA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSC-MLVAGDVYRPAAIDQLVI 119
+ + + PTVIL++GLQG GKTT S KLANYLK + +LVA DVYRPAAIDQL I
Sbjct: 91 AGVNLS-GNPTVILMSGLQGSGKTTFSGKLANYLKNKKNKKPLLVACDVYRPAAIDQLHI 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVGVPV++ P IA++G++ AK+ +++VVI+DTAGRL +D+ MM+E+ ++ +
Sbjct: 150 VGEQVGVPVFSDKDNNNPVDIAQKGVQYAKENHLNVVIIDTAGRLAVDEQMMNEISNIHK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
LNP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+++K V KPI
Sbjct: 210 ALNPQETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAITIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ ++ FYP+RMA RILGMGDV+S VE+AQE +E A ++QKKI F F
Sbjct: 270 KFVGTGEKMDAIDVFYPERMADRILGMGDVVSLVERAQEQFDEEQARKLQKKIAKNQFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +MTP+ER P
Sbjct: 330 DDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHSMTPKERSTPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
++ + R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 389 IIDLN--RKKRIAKGSGRDIQEVNQLMKQF 416
>gi|374298883|ref|YP_005050522.1| signal recognition particle protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332551819|gb|EGJ48863.1| signal recognition particle protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 508
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/404 (48%), Positives = 285/404 (70%), Gaps = 5/404 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VV++FV V E+A+G + + P QQ+VK+V DELV+L+GG+
Sbjct: 31 LREVRLALLEADVNFKVVKQFVDRVREKALGQDVQGSLTPGQQVVKVVHDELVELLGGKT 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGK-SCMLVAGDVYRPAAIDQLVI 119
S S+P +++ GLQG GKTT + KLA YL+++ K LV DVYRPAAIDQL
Sbjct: 91 SAFDVKGSKPLTVMMVGLQGSGKTTSAGKLALYLRREHKMKPFLVPADVYRPAAIDQLTK 150
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG Q+ VPVY + T++ P I + L+ AK K D+V+ DTAGRL ID+ +M+EL ++K
Sbjct: 151 LGAQIDVPVYPSSTDMNPVDICRDALQVAKDKGYDLVLFDTAGRLHIDERLMEELANIKA 210
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E+L V DAMTGQ+A + +F+ ++ I+G +LTK+DGD+RGGAALS+K V+GK +
Sbjct: 211 AVSPREILFVADAMTGQDAVNVAQSFDAKLEISGVVLTKMDGDARGGAALSIKSVTGKSV 270
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++ ++E F+PDR+A RILGMGDVL+ +EKAQ +++A+E+ KK A+FDF
Sbjct: 271 KFVGMGEKLSEMEVFHPDRIASRILGMGDVLTLIEKAQGEFSEDEAQELGKKFQKASFDF 330
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
DF Q R + ++GS+ ++ +IPGMGK+T ++ EK +K +EA+I +MT EER K
Sbjct: 331 EDFRTQMRRLKKLGSLEGLLKLIPGMGKLTKQLGEMSVHEKEMKRVEAIISSMTMEERRK 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
PE+L S RR+R+A SG + +QV+QLV QMR M+ +MG
Sbjct: 391 PEVLNVS--RRRRIAAGSGTSLEQVNQLVKNFDQMRKMMQQVMG 432
>gi|81428329|ref|YP_395329.1| Signal recognition particle protein Ffh [Lactobacillus sakei subsp.
sakei 23K]
gi|78609971|emb|CAI55018.1| Signal recognition particle protein Ffh [Lactobacillus sakei subsp.
sakei 23K]
Length = 478
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/417 (47%), Positives = 281/417 (67%), Gaps = 10/417 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ F++ V E+A+G ++ + P QQ+VKIV +EL K+MG
Sbjct: 32 MREIRLALLEADVNFKVVKDFIKVVKEKAIGTEVLESLSPAQQIVKIVDEELTKMMGETA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PT+I++ GLQG GKTT + KLA YL K K+ +++A D+YRPAAIDQL
Sbjct: 92 VPLNKSPKIPTIIMMVGLQGAGKTTTAGKLATYLIKNEKARPLMIAADIYRPAAIDQLKT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQVG PV+ GT+V P +I +QGL +A + D V++DTAGRLQID+A+M EL D+
Sbjct: 152 VGEQVGAPVFEMGTDVNPVEIVRQGLAQAALQKNDYVLIDTAGRLQIDEALMQELADIND 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E LL VDAMTGQ A + FN + ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LARPNETLLTVDAMTGQAAVDVAEGFNSRLDITGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G+GE++ L+ FYPDRM+ RILGMGD+LS +EKAQE ++ A +M +KI +FDF
Sbjct: 272 KFTGQGEKLNQLDVFYPDRMSSRILGMGDMLSLIEKAQEDYDEQKAVDMAEKIKENSFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q + MG + ++ MIPGM P ++ K + M+A++++MTP+ERE
Sbjct: 332 NDFLDQMDQLQNMGPLEDIMKMIPGMAN-NPQLKNIKMDPKDMTHMKAIVQSMTPQEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
P+LL +P RR+R+A +G+ +V++++ Q Q K +M M G+ + L
Sbjct: 391 PDLL--NPSRRRRLAAGAGRPIVEVNRMIKQFNQ----SKKMMNQMSKGNFNGMEGL 441
>gi|409387404|ref|ZP_11239634.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Lactococcus raffinolactis 4877]
gi|399205505|emb|CCK20549.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Lactococcus raffinolactis 4877]
Length = 506
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/402 (48%), Positives = 282/402 (70%), Gaps = 4/402 (0%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV++F++ + +A+GV + ++P QQ++KIV +EL ++GG +
Sbjct: 33 KEIRVALLEADVALPVVKKFIRNIRTRAIGVEVSEALQPAQQVIKIVDEELTAILGGGEA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVIL 120
EL + PT+I++AGLQG GKTT + KLA LK+ + +++A DVYRPAAI+QL +
Sbjct: 93 ELAKSPKIPTIIMMAGLQGAGKTTFAGKLAKRLKETENARTLMIAADVYRPAAIEQLKTV 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G QV VPVY GT+V P +I + GL A +K D V++DTAGRL+ID+ +M+EL +K +
Sbjct: 153 GSQVDVPVYDEGTDVNPVEIVRHGLALAAEKRNDYVLIDTAGRLEIDEKLMNELVQIKDL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
PTE+LLVVDAMTGQ AA + FN + ITG I+TKLDGD+RGGAALS++E++GKPIK
Sbjct: 213 AQPTEILLVVDAMTGQVAADVAKKFNETLEITGVIITKLDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++ DLE FYPDRM+ RILGMGD+L+ +EKAQ + + +M +K+ +FDFN
Sbjct: 273 FVGTGEKLTDLEVFYPDRMSSRILGMGDMLTLIEKAQSQFDEAQSAKMAEKMRENSFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKIT-PAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG + ++ MIPGM +I A ++ EK + A + +MTPEER P+
Sbjct: 333 DFIEQLDQVQSMGPLDEIMKMIPGMSEIPGAANIKVDEKDIARKRAAVLSMTPEERANPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L +P RR+R+A SG T +V++L+ Q + + M LM
Sbjct: 393 IL--TPSRRRRIAAGSGNTFIEVNKLIKQFNESKKMMSGLMN 432
>gi|308068626|ref|YP_003870231.1| signal recognition particle protein [Paenibacillus polymyxa E681]
gi|305857905|gb|ADM69693.1| Signal recognition particle protein [Paenibacillus polymyxa E681]
Length = 458
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/418 (46%), Positives = 286/418 (68%), Gaps = 5/418 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F+ V E++VG ++ P ++ IV EL +LMGG
Sbjct: 32 MREVRLALLEADVNFKVVKDFIAKVKEKSVGKEVMDSFTPGMVIIDIVNKELTELMGGSQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L A PTVI++ GLQG GKTT S KLA L+KQ +LVAGD+YRPAAI QL +L
Sbjct: 92 AKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKLLQKQNHRPLLVAGDIYRPAAIKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ PV+T G + P +IAKQGL+ AK D VI+DTAGRL +D+ +M+EL+ +
Sbjct: 152 GEQINTPVFTLGDQTSPVEIAKQGLQHAKDNGNDYVIIDTAGRLHVDEELMEELRQIHTN 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P EVLLVVD+MTGQ+A + FN + +TG +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 VKPDEVLLVVDSMTGQDAVNVAEHFNSSLELTGVVLTKLDGDTRGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+++ +EPF+P+RMA RILGMGD+LS +EKAQ + + A+EM++K+ +A F F
Sbjct: 272 FATLGEKLDAMEPFHPERMASRILGMGDMLSLIEKAQSNIDADKAKEMERKMRNAEFTFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V ++G + +++ MIPGMG + + ++ +K + +EA++ +MT +E++ P+
Sbjct: 332 DFLEQMDQVKKLGPIDQILDMIPGMGNMKQMKDIKVDDKQMGRIEAIVHSMTTQEKQNPD 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM--EGGSLPALSNLE 415
++ S RRKR++ SG + +V++L+ Q +MR MK +M +GG A+ L+
Sbjct: 392 MINHS--RRKRISVGSGTSLAEVNRLIKQFDEMRRMMKQFSDMMGPKGGKNKAMKQLK 447
>gi|300854474|ref|YP_003779458.1| signal recognition particle GTPase [Clostridium ljungdahlii DSM
13528]
gi|300434589|gb|ADK14356.1| predicted signal recognition particle GTPase [Clostridium
ljungdahlii DSM 13528]
Length = 449
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/407 (46%), Positives = 288/407 (70%), Gaps = 2/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+++VSE+ +G +++ + P QQ++KIV +EL LMG
Sbjct: 32 MREVKLALLEADVNYKVVKNFIKSVSEKCMGEEVLKSLTPAQQVIKIVNEELTLLMGKNE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S + + + TVI+L GLQG GKTT+ KLA L+K+ K +L A D+YRPAAI QL ++
Sbjct: 92 SGIEYNSNGLTVIMLVGLQGAGKTTMCGKLALQLRKKNKKPLLAACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+++ VPV++ G +V I K LE AK N++VVI+DTAGRLQID+ +M ELK +K
Sbjct: 152 GKEIDVPVFSMGDKVTAVDICKGALEYAKNNNLNVVIIDTAGRLQIDEELMGELKQIKEN 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E++LVVDAMTGQ+A + ++FN ++ I+G ILTKLDGD+RGGAALS++ ++ KPIK
Sbjct: 212 INPDEIMLVVDAMTGQDAVNVASSFNEQLNISGVILTKLDGDTRGGAALSIRAMTDKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M DL+ FYPDRMA RILGMGDVLS +EKAQ+ + +E+AE++ ++++ F+F
Sbjct: 272 FVGMGEKMNDLQVFYPDRMASRILGMGDVLSLIEKAQQSIDKEEAEKLGNRMLNKEFNFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPG--MGKITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL + +MG +S+++ M+PG M ++ + E+ L +E +I +MT +ER P
Sbjct: 332 DFLAIMQQTKKMGPISKLMEMVPGVNMKELKGVDFSKGEQELAKIECIINSMTVKERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+++ S R+KR+A SG T Q V++L+ +++ MK L G+ +G
Sbjct: 392 SIISGSSSRKKRIALGSGTTIQMVNKLLKDFEKIKKTMKQLNGMKKG 438
>gi|385799827|ref|YP_005836231.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Halanaerobium praevalens DSM 2228]
gi|309389191|gb|ADO77071.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Halanaerobium praevalens DSM 2228]
Length = 446
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/402 (47%), Positives = 280/402 (69%), Gaps = 7/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++ ALLEADV+ VV+ F++ + E+AVG ++ + P Q ++KIV +E+ LMGG
Sbjct: 32 LKEVKMALLEADVNYKVVKDFIKKIEERAVGNEVMESLTPGQHVIKIVNEEMQALMGGSK 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++ + PT+I++ GLQG GKTT + KLA L K GK+ +LVAGDVYRPAAI QL +L
Sbjct: 92 EDIAISSEPPTIIMMVGLQGSGKTTSAGKLARKLDKDGKNPLLVAGDVYRPAAIRQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE++ +PV++ G + P IAK + A N D +I+DTAGRL ID+ MM+EL+ +K
Sbjct: 152 GERLDLPVFSMGDDSNPVDIAKGSINYASSHNCDTIILDTAGRLHIDQEMMEELESIKAA 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
++P E+LLVVDAMTGQ+A + F+ + + G +LTK+DGD+RGGAALS+K ++GKPIK
Sbjct: 212 VDPDEILLVVDAMTGQDAVNVAKNFDQRLDVDGIVLTKMDGDARGGAALSIKAITGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ DLE F+PDRM+ RILGMGDVLS +EKA++ + QE A+++++K+ F
Sbjct: 272 FAGTGEKLADLETFHPDRMSSRILGMGDVLSLIEKAEQSIDQEKAKKLEEKLRKNEFTLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG---KITPAQVREAEKSLKIMEAMIEAMTPEEREK 357
DF++Q V MG M ++GMIPG+G ++ QV +K L +EA+I +MTPEER
Sbjct: 332 DFMEQMEQVRNMGPMDEILGMIPGLGGAKQLKNMQVD--DKHLDYIEAIISSMTPEERRD 389
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
PE++ S RRKR+AQ SG + Q+V++L+ Q Q + MK L
Sbjct: 390 PEVINGS--RRKRIAQGSGTSIQEVNRLLKQFRQTKKMMKQL 429
>gi|400290248|ref|ZP_10792275.1| signal recognition particle protein [Streptococcus ratti FA-1 = DSM
20564]
gi|399921039|gb|EJN93856.1| signal recognition particle protein [Streptococcus ratti FA-1 = DSM
20564]
Length = 515
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/407 (48%), Positives = 281/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E S
Sbjct: 33 KEIRLALLEADVALPVVKDFIKRVRERAIGHEVIDTLDPSQQIIKIVDEELTAILGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
EL + PTVI++AGLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 ELEKSPKIPTVIMMAGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTE +I + GL +AK+ D V++DTAGRLQID+ +M EL+DVK +
Sbjct: 153 GQQINVPVFEMGTEHTAVEIVRAGLAQAKENRNDYVLIDTAGRLQIDEKLMAELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS+++++GKPIK
Sbjct: 213 AQPDEILLVVDSMIGQEAANVAREFNNQLEITGLVLTKIDGDTRGGAALSIRQITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKISDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM P A V+ E+ + A++ +MTP ERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDILKMIPGMAN-NPALANVKVDERDIARKRAIVSSMTPAERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
ELL +P RR+R+A SG T V++ + Q + K + GV+ G
Sbjct: 392 ELL--TPSRRRRIAAGSGNTFVNVNKFIKDFNQAK---KMMQGVLSG 433
>gi|340622252|ref|YP_004740704.1| hypothetical protein Ccan_14810 [Capnocytophaga canimorsus Cc5]
gi|339902518|gb|AEK23597.1| Fifty-four-like protein [Capnocytophaga canimorsus Cc5]
Length = 446
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/390 (48%), Positives = 273/390 (70%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL+ADV+ + + F V E+A+G ++ + P Q ++KIV+DEL +LMGG+
Sbjct: 31 LKEVRRALLDADVNYKIAKDFTNKVKEKALGQNVLTNLHPGQLMIKIVKDELTELMGGDA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + P++IL++GLQG GKTT S KLAN+LK K+ K +LVA DVYRPAAIDQL I
Sbjct: 91 AGVNLS-GNPSIILMSGLQGSGKTTFSGKLANFLKNKKHKKPLLVACDVYRPAAIDQLHI 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+G+ V++ P IA + L+ AK +V+IVDTAGRL +D+ MMDE+ ++ +
Sbjct: 150 VGEQIGIEVFSDRGNNNPVDIALKALQHAKSNGFNVMIVDTAGRLAVDQQMMDEISNIHK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
LNP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+S+K V KPI
Sbjct: 210 ALNPQETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAISIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+M+ ++ FYP+RMA RILGMGDV+S VE+AQE +E A ++QKKI F F
Sbjct: 270 KFIGTGEKMDAIDVFYPERMADRILGMGDVISLVERAQEQFDEEQARKLQKKIAKNQFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFL Q + + +MGSM ++GM+PG+GK + ++ + K +EA+I +MTP ER P
Sbjct: 330 DDFLAQIQQIKKMGSMKDLLGMLPGVGKAVK-DLDISDDAFKHIEAIIYSMTPSERSNPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
L+ S R++R+A+ SG+ Q+V+QL+ Q
Sbjct: 389 LIDAS--RKRRIAKGSGRDVQEVNQLLKQF 416
>gi|383480060|ref|YP_005388954.1| Signal recognition particle, FfH [Streptococcus pyogenes MGAS15252]
gi|383493976|ref|YP_005411652.1| Signal recognition particle, FfH [Streptococcus pyogenes MGAS1882]
gi|378928050|gb|AFC66256.1| Signal recognition particle, FfH [Streptococcus pyogenes MGAS15252]
gi|378929704|gb|AFC68121.1| Signal recognition particle, FfH [Streptococcus pyogenes MGAS1882]
Length = 520
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 284/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNEELTSILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQINVPVFDMGTDHSAVDIVRKGLEQARENHNDYVLIDTAGRLQIDEKLMEELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|220905067|ref|YP_002480379.1| signal recognition particle protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869366|gb|ACL49701.1| signal recognition particle protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 512
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/397 (49%), Positives = 275/397 (69%), Gaps = 6/397 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VV+ FV+ V E+ +G +++GV P QQ+VKIV DELV L+GGE
Sbjct: 31 LREVRLALLEADVNFKVVKDFVENVREKCLGQEVLKGVSPAQQVVKIVHDELVGLLGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ L P VI+L GLQG GKTT + K+AN L+KQ LV DVYRPAAIDQL +L
Sbjct: 91 AALDLQGREPAVIMLVGLQGSGKTTSAGKIANILRKQKMRPYLVPADVYRPAAIDQLTVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
+Q+ +P Y + ++ P IAK LEEA+++ V+++DTAGRL +D+ +M EL+ +K
Sbjct: 151 AKQLDMPCYPSTVDMDPVDIAKAALEEARREQATVLLLDTAGRLHVDEPLMQELEAIKAA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+L V DAMTGQ+A + +FN +G+TG +LTK+DGD+RGGAALS++ V+G P+K
Sbjct: 211 VQPQEILFVADAMTGQDAVTVAESFNERLGVTGVVLTKMDGDARGGAALSIRAVTGAPVK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++ ++E F+PDR+AGRILGMGDVL+ VEKAQ + E+AEE+ +K+ A+FD
Sbjct: 271 FVGMGEKLSEMEVFHPDRIAGRILGMGDVLTLVEKAQGAINAEEAEELARKMKKASFDLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEAMIEAMTPEERE 356
DF Q R + ++GS+ ++ MIPG+G K+ A EK + EA+I +MT ER
Sbjct: 331 DFRTQMRRIKKLGSLESILKMIPGLGGLRDKLAEASGAMPEKEMARTEAIINSMTMAERR 390
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
P+LL S RR R+A+ +G T QV+QLV Q QMR
Sbjct: 391 NPDLLNGS--RRARIAKGAGVTVAQVNQLVRQFEQMR 425
>gi|386714307|ref|YP_006180630.1| signal recognition particle protein [Halobacillus halophilus DSM
2266]
gi|384073863|emb|CCG45356.1| signal recognition particle protein [Halobacillus halophilus DSM
2266]
Length = 446
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/400 (48%), Positives = 284/400 (71%), Gaps = 4/400 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
R++R ALLEADV+ VV+ FV+ V E+AVG ++ + P QQ++K+V++EL LMGG+ S
Sbjct: 33 REVRLALLEADVNFKVVKDFVKRVRERAVGQEVMESLTPGQQVIKVVKEELTDLMGGDES 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVIL 120
++ AK PTVI++ GLQG GKTT + KLAN L+K + +L A DVYRPAAI QL +
Sbjct: 93 KIAVAKRPPTVIMMVGLQGAGKTTTTGKLANVLRKNHNRKPLLAAADVYRPAAIQQLETI 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV++ GTE P IAK +E+AK++N D VIVDTAGRL +D +M EL+ +K
Sbjct: 153 GKQLTMPVHSEGTEADPVDIAKNAIEKAKEENHDYVIVDTAGRLHVDGELMGELQRIKEA 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+ LVVDAMTGQ+A + +F+ ++ ITG +LTKLDGD+RGGAALS+K V+GKPIK
Sbjct: 213 VNPDEIFLVVDAMTGQDAVNVAQSFDDQLDITGVLLTKLDGDTRGGAALSIKAVTGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++ LEPF+P+RMA RILGMGD+L+ +EKAQ + ++ A+E++ K+ +A+F F
Sbjct: 273 YAGMGEKLDQLEPFHPERMASRILGMGDMLTLIEKAQTQVDEKQAKELESKMRTASFTFE 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL Q V MG + +I MIPG K+ +K + +EA+I++MT +ER+ P
Sbjct: 333 DFLDQMEQVKNMGPLDEIINMIPGANKMKGLKNASFDDKQIVHVEAIIQSMTKKERQDPS 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ S R+KR+A+ SG + ++++L+ Q +M+ MK +
Sbjct: 393 VMNAS--RKKRIAKGSGTSVSEINRLLKQFEEMKKMMKQM 430
>gi|406658389|ref|ZP_11066529.1| signal recognition particle protein [Streptococcus iniae 9117]
gi|405578604|gb|EKB52718.1| signal recognition particle protein [Streptococcus iniae 9117]
Length = 523
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 279/401 (69%), Gaps = 4/401 (0%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDPTQQIVKIVNEELTGILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEEDARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ +I +GLE A+ D V++DTAGRLQID+A+M EL+DVK +
Sbjct: 153 GQQINVPVFDMGTDHSAIEIVTKGLELARDNRNDYVLIDTAGRLQIDEALMGELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGDSRGGAALS++E++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVADEFNKQLNITGVVLTKIDGDSRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + Q+ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDQQKSMELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF+ Q V MG M ++ MIPGM G A ++ +K + A++ +MT ERE P+
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDDKQIARKRAIVSSMTKAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 400
LL +P RR+R+A SG + +V++ + Q + M+ +M
Sbjct: 393 LL--TPSRRRRIAAGSGNSFVEVNKFIKDFNQAKAMMQGMM 431
>gi|347734048|ref|ZP_08867100.1| signal recognition particle protein [Desulfovibrio sp. A2]
gi|347517140|gb|EGY24333.1| signal recognition particle protein [Desulfovibrio sp. A2]
Length = 515
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/403 (48%), Positives = 278/403 (68%), Gaps = 4/403 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VVR F++ V E+ +G +++ + P QQ+VKIV DELV+L+GG
Sbjct: 31 LREVRLALLEADVNFKVVRDFIERVRERCLGQDVLKSLTPAQQVVKIVHDELVELLGGGT 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L +P VI++ GLQG GKTT SAKLAN L+KQ L DVYRPAAIDQL L
Sbjct: 91 TQLDLRGKQPYVIMMVGLQGSGKTTSSAKLANLLRKQKMRPYLAPADVYRPAAIDQLHTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
+Q+ +P Y + + P IA +E+A++K +VVIVDTAGRL ID+ +M EL +K
Sbjct: 151 AKQLDIPAYPSAPGMNPVDIAAAAVEDAREKQCNVVIVDTAGRLHIDETLMQELVSIKGR 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+L V DAMTGQ+A + +FN + I+G +LTK+DGD+RGGAALS++ V+GKP+K
Sbjct: 211 VEPQEILFVADAMTGQDAVTVAESFNAALDISGVVLTKMDGDARGGAALSIRSVTGKPVK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++ D+E F+PDR+AGRILGMGDV++ +EKAQ ++ E+AEE+ +K A FD
Sbjct: 271 FVGMGEKLSDIEVFHPDRVAGRILGMGDVMTLIEKAQSTIKAEEAEELGRKFQKAEFDLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF Q R + ++GS+ ++ +IPGMG + ++ EK + +EA+I +MT +ER P
Sbjct: 331 DFRTQMRRLKKLGSLEGILKLIPGMGALREKLGEMNVPEKEMGRVEAIINSMTMQERRNP 390
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
++L S RR+R+A SG T Q V+QL+ QMR MK +MG
Sbjct: 391 KVLNGS--RRQRIAMGSGTTVQDVNQLIKNFEQMREMMKKVMG 431
>gi|307244407|ref|ZP_07526518.1| signal recognition particle protein [Peptostreptococcus stomatis
DSM 17678]
gi|306492226|gb|EFM64268.1| signal recognition particle protein [Peptostreptococcus stomatis
DSM 17678]
Length = 452
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/400 (50%), Positives = 285/400 (71%), Gaps = 6/400 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ FV+ V E+ VG +++ + P Q +VKIV +EL LMG
Sbjct: 32 MREVKMALLEADVNFKVVKDFVKVVQERCVGEEVLKSLTPGQMVVKIVNEELTALMGDVQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L ++ PTVI++ GLQG GKTT S KL YLKK GKS +LVA DVYRPAAI QL ++
Sbjct: 92 SKLTYSPQPPTVIMMVGLQGAGKTTTSGKLGGYLKKDGKSPLLVACDVYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GE++ +PV+ G +V P +IAK+ LE AK + DVVI+DTAGRL +D+ +M ELKD+K
Sbjct: 152 GEKLDLPVFAMGDQVSPVEIAKKALEHAKSHSNDVVIIDTAGRLHVDEVLMQELKDIKTQ 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+LLVVD+MTGQ+A + +FN +GI G +LTKLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VNPQEILLVVDSMTGQDAVNVSESFNEILGIDGVVLTKLDGDTRGGAALSIRAVTQKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++++LEPFYPDRMA RILGMGDVLS +EKA+ + E A+E+ +K+ DF
Sbjct: 272 FIGMGEKLDNLEPFYPDRMASRILGMGDVLSLIEKAESALDMEKAKELGQKLKKNEMDFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE---KSLKIMEAMIEAMTPEEREK 357
DFL Q V +G + +++ ++PGMG I Q+ + + K + +A+I++MT EER
Sbjct: 332 DFLMQLEQVQNLGPLDKLLELVPGMGNIK-GQIGDLDSKGKEINRTKAIIQSMTLEERRN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK 397
P++L S R+KR+A+ SG + Q V++L+ Q +M+ MK
Sbjct: 391 PQILNAS--RKKRIARGSGTSVQDVNRLIKQFNEMKKMMK 428
>gi|390953363|ref|YP_006417121.1| signal recognition particle subunit FFH/SRP54 (srp54) [Aequorivita
sublithincola DSM 14238]
gi|390419349|gb|AFL80106.1| signal recognition particle subunit FFH/SRP54 (srp54) [Aequorivita
sublithincola DSM 14238]
Length = 442
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/390 (50%), Positives = 274/390 (70%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL+ADV+ + F +V E+A+G ++ ++P Q +VK+V+DEL +LMGGE
Sbjct: 31 LKEVRRALLDADVNFKTAKEFTNSVKEKALGQNVLTSLQPGQLMVKLVKDELTELMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + + P+VIL++GLQG GKTT S KLANYLK K+ K +LVA D+YRPAAI+QL +
Sbjct: 91 AGINLSGT-PSVILMSGLQGSGKTTFSGKLANYLKTKKSKKPLLVACDIYRPAAINQLHV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+GV VY+ P IA+ + AK+ +VVIVDTAGRL ID+AMM E+ DV +
Sbjct: 150 VGDQIGVEVYSEPENKNPVAIAQNAIAHAKQNGFNVVIVDTAGRLAIDEAMMAEIADVHK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVDAMTGQ+A FN ++ G +LTKLDGD+RGGAA+S+K V KPI
Sbjct: 210 AINPQETLFVVDAMTGQDAVNTAKAFNEKLNFDGVVLTKLDGDTRGGAAISIKSVVDKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+M+ ++ F+P RMA RILGMGDV+S VE+AQE +E+A ++QKKI F F
Sbjct: 270 KFIGTGEKMDAIDVFHPARMADRILGMGDVVSLVERAQEQFDEEEARKIQKKIAKNQFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFL Q + V +MGSM ++GMIPG GK V + + K +EA+I +MTP ER +P
Sbjct: 330 DDFLSQIQQVKKMGSMKDLVGMIPGAGKALK-DVDIDDDAFKGIEAIIHSMTPTERAQPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
++ S R+KR+A SG + QQV+QL+ Q
Sbjct: 389 VIDGS--RKKRIASGSGTSVQQVNQLLKQF 416
>gi|83814688|ref|YP_445750.1| signal recognition particle protein [Salinibacter ruber DSM 13855]
gi|83756082|gb|ABC44195.1| signal recognition particle protein [Salinibacter ruber DSM 13855]
Length = 461
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/423 (47%), Positives = 285/423 (67%), Gaps = 9/423 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IRRALL ADV+ V + F V E A G ++ V P +QL KI+ DEL +++GGE
Sbjct: 31 MREIRRALLNADVNYQVAKEFTANVKEAATGEDVLTSVTPGEQLTKIMHDELTRVLGGEH 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ A++ PTVIL+AGLQG GKTT AKLA + +K+G + +L A DVYRPAA+DQL L
Sbjct: 91 EGIEMAETPPTVILVAGLQGSGKTTFCAKLARHFRKEGHAPLLAASDVYRPAAVDQLKTL 150
Query: 121 GEQVGVPVYTA---GTEVKPS-QIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD 176
+QV PVY+ G V+ + ++A + + EA+ D+VI+DTAGR+ ID+AMM E++D
Sbjct: 151 ADQVNAPVYSIEDDGEIVEDAVRVANEAVTEAQNTARDIVIIDTAGRMHIDEAMMQEVED 210
Query: 177 VKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSG 236
+K + P E L VVD+MTGQ+A FN I G +L+KLDGD+RGGAALS++ V
Sbjct: 211 IKTTVAPNETLFVVDSMTGQDAVNTAKEFNERIDYDGVVLSKLDGDTRGGAALSIRTVVN 270
Query: 237 KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN 296
KPIK GE+++ L PFYPDRMA RILGMGDV+SFVE+AQE +++AE +Q+KI S
Sbjct: 271 KPIKFASTGEKLDALTPFYPDRMAQRILGMGDVVSFVERAQEQYDEQEAERLQEKIRSEE 330
Query: 297 FDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEER 355
FD DF Q + + +MGS+ ++GMIPG+G KI+ + E++ +EA+I++MTPEER
Sbjct: 331 FDLQDFYDQLQRIQKMGSIKELMGMIPGVGNKISDLDID--EEAFTHIEAIIQSMTPEER 388
Query: 356 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 415
P++L + RR+R+A+ SG + V+QLV+Q +M+ MK + + G +S+L
Sbjct: 389 AHPDIL--NGTRRRRIARGSGNEVRDVNQLVSQFEEMKDMMKTMQKMTSKGQDVDISSLM 446
Query: 416 DAL 418
D +
Sbjct: 447 DKI 449
>gi|372222922|ref|ZP_09501343.1| signal recognition particle protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 442
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/390 (49%), Positives = 270/390 (69%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL+ADV+ + + F V ++A+G ++ ++P Q +VKIV+DEL +LMGG+
Sbjct: 31 LKEVRRALLDADVNFKIAKEFTNTVKDKALGQNVLSTLQPGQLMVKIVKDELTQLMGGD- 89
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E V P+VIL++GLQG GKTT S KLAN+LK K+ K +LVA DVYRPAAIDQL +
Sbjct: 90 AEGVDLSGNPSVILMSGLQGSGKTTFSGKLANFLKNKKTKKPLLVACDVYRPAAIDQLHV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+GV VY+ P IA+ G+ AK +VVI+DTAGRL +D+ MMDE+ ++ +
Sbjct: 150 VGEQIGVEVYSDRGNTDPVAIAQAGIAHAKTLGCNVVIIDTAGRLAVDQEMMDEISNIHK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+S+K V KPI
Sbjct: 210 AIQPQETLFVVDSMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAISIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ FYP RMA RILGMGDV+S VE+AQE +E A ++QKKI F F
Sbjct: 270 KFIGTGEKMEAIDVFYPSRMADRILGMGDVVSLVERAQEQFDEEQARKIQKKIAKNKFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFL Q + + +MG+M ++GMIPGMGK + + + K +EA+I +MTP+ER P
Sbjct: 330 DDFLSQIQQIKKMGNMKDLMGMIPGMGKALKG-IDIDDDAFKHIEAIIHSMTPDERANPN 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
L S R+KR+A SG++ Q V+QL+ Q
Sbjct: 389 KLNSS--RKKRIAAGSGRSVQDVNQLLKQF 416
>gi|408370475|ref|ZP_11168252.1| signal recognition particle protein [Galbibacter sp. ck-I2-15]
gi|407744233|gb|EKF55803.1| signal recognition particle protein [Galbibacter sp. ck-I2-15]
Length = 442
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/390 (50%), Positives = 272/390 (69%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL+ADV+ + F +V +A+G ++ ++P Q +VK+V+DEL +LMGGE
Sbjct: 31 LKEVRRALLDADVNFKTAKEFTNSVKSKALGQDVLTSLKPGQLMVKLVKDELTELMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + P+VIL+AGLQG GKTT S KLAN+LK K+ K+ +LVA DVYRPAAIDQL +
Sbjct: 91 AGVDLS-GNPSVILMAGLQGSGKTTFSGKLANFLKNKKTKNPLLVACDVYRPAAIDQLHV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+GV VY+ P IAK G++ AK +VVIVDTAGRL +D+ MM E+ ++
Sbjct: 150 VGEQIGVSVYSDRENSDPVAIAKAGVDYAKANGHNVVIVDTAGRLAVDELMMKEISNIHN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVD+MTGQ+A +FN + G ILTKLDGD+RGGAALS+K V KPI
Sbjct: 210 AINPNETLFVVDSMTGQDAVNTAKSFNDVLDFDGVILTKLDGDTRGGAALSIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++ KKI F F
Sbjct: 270 KFIGTGEKMDAVDVFYPSRMADRILGMGDVVSLVERAQEQYDEEEARKLHKKIAKDQFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFL Q + + +MGSM ++GMIPG GK + + + K +EA+I +MTPEER P
Sbjct: 330 DDFLSQIQQIKKMGSMKDLLGMIPGAGKALKGMDID-DDAFKGIEAIIHSMTPEERSTPS 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
+L S R+KR+A+ SG + Q+V+QL+ Q
Sbjct: 389 VLNGS--RKKRIAKGSGTSVQEVNQLLKQF 416
>gi|300172914|ref|YP_003772079.1| signal recognition particle protein [Leuconostoc gasicomitatum LMG
18811]
gi|299887292|emb|CBL91260.1| Signal recognition particle protein [Leuconostoc gasicomitatum LMG
18811]
Length = 489
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/409 (49%), Positives = 272/409 (66%), Gaps = 6/409 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ V++FV V E+A G ++ G+ P QQ+VKIV DEL MG E
Sbjct: 32 MREIRLALLEADVNYDTVKKFVANVREKASGADILEGLNPAQQVVKIVNDELTTTMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
+ L + PT+I++AGLQG GKTT AKLA LKK+ + +L+A DVYRPAAIDQL I
Sbjct: 92 APLNKSPKIPTIIMMAGLQGAGKTTTVAKLAYKLKKEENARPLLIAADVYRPAAIDQLEI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG + +PV+ GT V P +I +QGL +A + D V +DTAGRLQID +M ELKDV
Sbjct: 152 LGRDLEIPVFQLGTAVNPREIVRQGLAKAAENKNDYVFIDTAGRLQIDDVLMQELKDVAE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAALS+++V+GKPI
Sbjct: 212 IAHPDEILLTVDAMTGQNAAETAKGFSAALDLTGVVLTKLDGDTRGGAALSIRDVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E + +K+ FDF
Sbjct: 272 KFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEAQAKQLEKMRQNTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q + V MG M ++ MIPGM P A V K +EA++ +MTP ERE
Sbjct: 332 NDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNIDAKQFSHLEAIVNSMTPAERED 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
P+L+ +P RR+R+A +G+ +V++++ Q QMR M GG
Sbjct: 391 PDLI--NPSRRRRLAAGAGRPIIEVNRMIKQFDQMRKMMNQATNGNFGG 437
>gi|390630509|ref|ZP_10258490.1| Signal recognition particle protein Ffh [Weissella confusa LBAE
C39-2]
gi|390484245|emb|CCF30838.1| Signal recognition particle protein Ffh [Weissella confusa LBAE
C39-2]
Length = 487
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/396 (50%), Positives = 271/396 (68%), Gaps = 6/396 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A G ++ G+ P QQ+V IV DEL +MG
Sbjct: 32 MREIRLALLEADVNFTVVKDFVRNVREKAAGAKVLEGLNPAQQIVSIVNDELTAMMGESD 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PTVI++ GLQG GKTT + KLA LK + + +++A DVYRPAAIDQL
Sbjct: 92 VPLNVSDKIPTVIMMVGLQGAGKTTTAGKLALKLKNEKNARPLMIAADVYRPAAIDQLKT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+ VPV+ GT+ P I +QGL +A + D V +D AGRLQID+A+M EL DVK
Sbjct: 152 LGEQIDVPVFEMGTDADPRDIVRQGLAKAAELKSDYVFIDAAGRLQIDEALMQELADVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ NP E+LLVVDAMTGQ A FN + +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IANPDEILLVVDAMTGQNAVETAEGFNERLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ ++ A E +K+ S FDF
Sbjct: 272 KFVGQGEKMADLDVFYPDRMASRILGMGDLLTLIEKAQKDFDEKQAAETMEKMKSNTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q V MG + ++ MIPGM P A V+ K + ++A++ +MTP ERE
Sbjct: 332 NDFIAQMDQVQNMGPIEDLLKMIPGMAN-NPALANVKVDPKDMAHIKAIVMSMTPAEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
P+LL +P RR+R+A +G+ +V++L+ Q +M+
Sbjct: 391 PDLL--NPSRRRRLAAGAGRPVVEVNRLIKQFNEMK 424
>gi|306820620|ref|ZP_07454249.1| signal recognition particle protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551351|gb|EFM39313.1| signal recognition particle protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 443
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/409 (48%), Positives = 282/409 (68%), Gaps = 9/409 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M+ ++ ALLEADV+ VV+ FV V E++VG +++ + P QQ++KIV DEL +LMG
Sbjct: 32 MKQVKLALLEADVNYKVVKDFVAKVKERSVGEEVMKSLTPGQQVIKIVNDELKELMGSVQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ + PTVIL++GLQG GKTT + KLA +LK QGK+ MLVA DVYRPAAI QL IL
Sbjct: 92 SKINISSKPPTVILMSGLQGAGKTTTTGKLAYHLKSQGKNPMLVACDVYRPAAITQLQIL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
++VG Y+ P IA+ +E AK DVVI+DTAGRL ID+ +M ELK++K
Sbjct: 152 SDKVGAKFYSEEGNKNPVTIAQNAVESAKTLGFDVVIIDTAGRLHIDEELMQELKNIKST 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P+E+LLVVDAMTGQ+ +V +F+ +GI G IL+KLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VRPSEILLVVDAMTGQDTVNIVKSFDEALGIDGVILSKLDGDTRGGAALSIRAVTNKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE++ DLEPFYPDR+A RILGMGDV+S +EKAQ + ++ +E++ KI + +F+F
Sbjct: 272 FAAIGEKINDLEPFYPDRIASRILGMGDVMSLIEKAQNAVDEQSMKELENKIRNRDFNFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTPEEREK 357
DFLKQ + + +MG + +I MIPG+ P Q++ A +K L +EA+I++MT +ER
Sbjct: 332 DFLKQMQQIKKMGPLKNIIEMIPGV----PKQLKNADIDDKELLKIEAIIQSMTKQERLD 387
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
P ++ S R+ R+A+ SG QV++L+ Q + R MK + + GG
Sbjct: 388 PSIINGS--RKIRIAKGSGTQVSQVNKLLKQFEETRKMMKQMTNIKMGG 434
>gi|339634031|ref|YP_004725672.1| signal recognition particle protein [Weissella koreensis KACC
15510]
gi|420161374|ref|ZP_14668139.1| signal recognition particle protein Ffh [Weissella koreensis KCTC
3621]
gi|420161511|ref|ZP_14668275.1| signal recognition particle protein Ffh [Weissella koreensis KCTC
3621]
gi|338853827|gb|AEJ22993.1| signal recognition particle protein [Weissella koreensis KACC
15510]
gi|394745049|gb|EJF33945.1| signal recognition particle protein Ffh [Weissella koreensis KCTC
3621]
gi|394745351|gb|EJF34235.1| signal recognition particle protein Ffh [Weissella koreensis KCTC
3621]
Length = 491
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/403 (49%), Positives = 276/403 (68%), Gaps = 4/403 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV VV+ FV+ V E+A G ++ G+ P QQ+VKIV DEL +MG +
Sbjct: 32 MREIRMALLEADVDYTVVKSFVRDVREKAAGQKVLEGLNPAQQIVKIVNDELTAMMGEQD 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKK-QGKSCMLVAGDVYRPAAIDQLVI 119
L + PTVI++ GLQG GKTT + KLA LKK Q +++A D+YRPAAIDQL
Sbjct: 92 VPLNRSPKIPTVIMMVGLQGAGKTTTAGKLAFKLKKEQNARPLMIAADIYRPAAIDQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV++ GT V P +I KQGL +A++ D V +D AGRLQID+A+M EL DVK
Sbjct: 152 LGQQIDVPVFSMGTNVDPREIVKQGLAKAEELKSDYVFIDAAGRLQIDEALMQELADVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ A T FN +GITG +LTKLDGD+RGGAALS++ ++ KPI
Sbjct: 212 IAQPDEILLVVDAMTGQNATETATGFNDRLGITGVVLTKLDGDTRGGAALSIRAITNKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+M DL+ FYP+RMA RILGMGD+++ +EKAQ+ + ++ A E +K+ FDF
Sbjct: 272 KFVGQGEKMTDLDVFYPERMASRILGMGDLMTLIEKAQKDVDEKKAAEQAEKMRQNTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAE-KSLKIMEAMIEAMTPEEREKP 358
NDF+ Q V MG + ++ MIPGM Q + + K + M+A++ +MTP ERE P
Sbjct: 332 NDFIDQMDQVQNMGPLEDLMKMIPGMANNPALQNMQMDPKQIDHMKAIVLSMTPAEREDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L+ +P RR+R+A +G+ +V++++ Q QM+ M M
Sbjct: 392 DLI--NPSRRRRLAAGAGRPIVEVNRMIKQFNQMKGMMSKAMN 432
>gi|294507645|ref|YP_003571703.1| signal recognition particle protein [Salinibacter ruber M8]
gi|294343973|emb|CBH24751.1| signal recognition particle protein [Salinibacter ruber M8]
Length = 461
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/423 (47%), Positives = 285/423 (67%), Gaps = 9/423 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IRRALL ADV+ V + F V E A G ++ V P +QL KI+ DEL +++GGE
Sbjct: 31 MREIRRALLNADVNYQVAKEFTANVKEAATGEDVLTSVTPGEQLTKIMHDELTRVLGGEH 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ A++ PTVIL+AGLQG GKTT AKLA + +K+G + +L A DVYRPAA+DQL L
Sbjct: 91 EGIEMAETPPTVILVAGLQGSGKTTFCAKLARHFRKEGHAPLLAASDVYRPAAVDQLKTL 150
Query: 121 GEQVGVPVYTA---GTEVKPS-QIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD 176
+QV PVY+ G V+ + ++A + + EA+ D+VI+DTAGR+ ID+AMM E++D
Sbjct: 151 ADQVNAPVYSIEDDGEIVEDAVRVANEAVAEAQNTARDIVIIDTAGRMHIDEAMMQEVED 210
Query: 177 VKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSG 236
+K + P E L VVD+MTGQ+A FN I G +L+KLDGD+RGGAALS++ V
Sbjct: 211 IKTTVAPNETLFVVDSMTGQDAVNTAKEFNERIDYDGVVLSKLDGDTRGGAALSIRTVVN 270
Query: 237 KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN 296
KPIK GE+++ L PFYPDRMA RILGMGDV+SFVE+AQE +++AE +Q+KI S
Sbjct: 271 KPIKFASTGEKLDALTPFYPDRMAQRILGMGDVVSFVERAQEQYDEQEAERLQEKIRSEE 330
Query: 297 FDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEER 355
FD DF Q + + +MGS+ ++GMIPG+G KI+ + E++ +EA+I++MTPEER
Sbjct: 331 FDLQDFYDQLQRIQKMGSIKELMGMIPGVGNKISDLDID--EEAFTHIEAIIQSMTPEER 388
Query: 356 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLE 415
P++L + RR+R+A+ SG + V+QLV+Q +M+ MK + + G +S+L
Sbjct: 389 AHPDIL--NGTRRRRIARGSGNEVRDVNQLVSQFEEMKDMMKTMQKMTSKGQDVDISSLM 446
Query: 416 DAL 418
D +
Sbjct: 447 DKI 449
>gi|229495294|ref|ZP_04389029.1| signal recognition particle protein [Porphyromonas endodontalis
ATCC 35406]
gi|229317737|gb|EEN83635.1| signal recognition particle protein [Porphyromonas endodontalis
ATCC 35406]
Length = 442
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/410 (50%), Positives = 279/410 (68%), Gaps = 8/410 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V ++F V E A+G ++ VRP + +VKIV DEL +LMGGE
Sbjct: 31 LKDVRRALLDADVNYNVAKKFTDTVKETALGRNVLTAVRPSEMMVKIVHDELARLMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVI 119
EL S P V+L++GLQG GKTT S KLA LK Q K+ +LVA DVYRPAAIDQL +
Sbjct: 91 VELRLQGS-PAVVLMSGLQGSGKTTFSGKLAKLLKTQRHKNPLLVACDVYRPAAIDQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+ +PVY KP QIA++G+ A++ DVVIVDTAGRL +D+ MM E+ +K
Sbjct: 150 LGEQLNIPVYAEEDNKKPVQIAERGITYAREHGHDVVIVDTAGRLAVDEEMMQEIAAIKA 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPDEVLFVVDSMTGQDAVNTAKEFNDRLDFGGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE M+ L+ F+P+RMA RILGMGD++S VE+AQ+ +++A ++++I FDF
Sbjct: 270 KFVGTGEGMDALDVFHPERMADRILGMGDIVSLVERAQQQYDEQEARRLEQRIAKDQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFLKQ + +MG++ ++ MIPG+GK + + + K +EA+I +MTPEER P
Sbjct: 330 NDFLKQIHQIKKMGNIRDLVSMIPGVGK-AIKDIDIDDDAFKGIEAIIYSMTPEERAHPS 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 409
LL + RRKR+A+ SG T Q V++L+ Q Q R MK + + GS P
Sbjct: 389 LL--NGQRRKRIAKGSGTTVQDVNKLITQFDQARKMMKTVQAM---GSNP 433
>gi|408672491|ref|YP_006872239.1| signal recognition particle protein [Emticicia oligotrophica DSM
17448]
gi|387854115|gb|AFK02212.1| signal recognition particle protein [Emticicia oligotrophica DSM
17448]
Length = 438
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/414 (47%), Positives = 281/414 (67%), Gaps = 10/414 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRAL++ADV+ V + V ++A+ ++ V P Q VKIV++EL++LMGG+
Sbjct: 31 VKEVRRALMDADVNYKVAKEVTDRVRDKAIDRKVMIAVEPGQLFVKIVQEELMELMGGQ- 89
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++ V K P V+L+AGLQG GKTT S K ANYLKKQG+ +LVA DVYRPAAI QL +L
Sbjct: 90 AQSVNLKGSPAVVLIAGLQGSGKTTFSGKFANYLKKQGRQVLLVACDVYRPAAITQLQVL 149
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+GV V+ +IAK L AK K +VIVDTAGRL +D+ MM E++++K+
Sbjct: 150 GEQIGVEVFAEPENKNAVEIAKNALSYAKTKGKSIVIVDTAGRLAVDEVMMKEVEEIKKA 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P+E+L VVD+MTGQ+A TFN + G +LTKLDGD+RGGAALS+K V KPIK
Sbjct: 210 ITPSEILFVVDSMTGQDAVNTAKTFNDRLDFDGVVLTKLDGDARGGAALSIKAVVNKPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+ GE+ME L+ FYPDRMA RILGMGDV+S VE+AQ+ +E++ + KK+ FD N
Sbjct: 270 FISTGEKMEALDIFYPDRMASRILGMGDVISLVERAQQAFDEEESRRLNKKMRENKFDLN 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVRE---AEKSLKIMEAMIEAMTPEEREK 357
DFL Q + +MG++ ++GMIPG+G +Q+++ + S K +EA+I++MTP+ER K
Sbjct: 330 DFLTQLEQIKKMGNIKDLMGMIPGVG----SQIKDIDISNDSFKPIEAIIKSMTPKERSK 385
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
P+++ S R+KR+A SG QQV+ L+ Q QMR MK + + G + A
Sbjct: 386 PDIIDGS--RKKRIAAGSGTDIQQVNNLLKQFDQMRSMMKKVNQMQASGKMKAF 437
>gi|345019917|ref|ZP_08783530.1| signal recognition particle [Ornithinibacillus scapharcae TW25]
Length = 449
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/400 (48%), Positives = 286/400 (71%), Gaps = 4/400 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
R+IR ALLEADV+ VV+ + + E+AVG ++ + P QQ++K+V++EL +LMGGE S
Sbjct: 33 REIRLALLEADVNFKVVKDLIARIKERAVGQEVLESLTPGQQVIKVVKEELTELMGGEQS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
++ + PTVI++ GLQG GKTT + KLAN L KK +S +LVA DVYRPAAI QL L
Sbjct: 93 KIAVSDRPPTVIMMVGLQGAGKTTTTGKLANLLRKKYNRSPLLVACDVYRPAAIKQLETL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ +PV++ GTE P IAK + +AK+++ D V++DTAGRL +D +M EL+ +K
Sbjct: 153 GSQLDMPVFSMGTEANPVDIAKNAIAKAKEEHHDYVLIDTAGRLHVDTDLMQELEQIKDT 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+ LVVDAMTGQ+A + +FN ++ I+G I+TKLDGD+RGGAALS+K V+GK IK
Sbjct: 213 VNPDEIFLVVDAMTGQDAVNVAESFNEQLDISGVIVTKLDGDTRGGAALSIKAVTGKSIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+ +++K+ +A F F+
Sbjct: 273 FAGMGEKLDQLEPFHPERMASRILGMGDVLTLIEKAQSSVDEKQAKALEEKMRNATFTFD 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V +MG + ++ MIPG K+ + V+ EK L +EA+I++MT +ER+ P
Sbjct: 333 DFLEQMSQVKKMGPLDDLLAMIPGANKMKGLKNVQFDEKQLSHVEAIIQSMTKKERQDPT 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ S R+KR+A+ SG + QV++L+ Q +M+ MK +
Sbjct: 393 IMNAS--RKKRIAKGSGTSVSQVNRLLKQFDEMKKMMKQM 430
>gi|363894773|ref|ZP_09321839.1| signal recognition particle protein [Eubacteriaceae bacterium
ACC19a]
gi|361961465|gb|EHL14664.1| signal recognition particle protein [Eubacteriaceae bacterium
ACC19a]
Length = 444
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/405 (49%), Positives = 281/405 (69%), Gaps = 3/405 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ FV+ V E+++G +++ + P QQ++KIV DEL +LMGG
Sbjct: 32 MREVKLALLEADVNYKVVKDFVKRVKERSIGEEVLKSLTPGQQVIKIVNDELKELMGGVQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L + PTVIL++GLQG GKTT + KLA+ LK+QGK+ MLVA DVYRPAA+ QL IL
Sbjct: 92 SKLNISSKPPTVILMSGLQGAGKTTTTGKLAHNLKQQGKNPMLVACDVYRPAAVKQLEIL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
++VG Y+ P QIA + EAK D+VI+DTAGRL ID+ +MDELK++K
Sbjct: 152 ADKVGAKFYSEENNNNPVQIATNAVAEAKTLGFDIVIIDTAGRLHIDEELMDELKNIKSS 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A +V TF+ +GI G IL+KLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VKPHEILLVVDAMTGQDAVNIVKTFDEALGIDGVILSKLDGDTRGGAALSIRAVTDKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE++ DLEPFYPDRMA RILGMGDVLS +EKAQ + + + + K+ + +F+F+
Sbjct: 272 FSATGEKIGDLEPFYPDRMANRILGMGDVLSLIEKAQSSVDMDAIKGLDSKMKNMDFNFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MGS+ +I MIPG+ K + +K L +EA+I++MT +ER P +
Sbjct: 332 DFLLQMQQIKKMGSLKSLIEMIPGLSK-QMKNIDVDDKELVKIEAIIQSMTKQERANPSI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+ S R+ R+A+ SG QV++L+ Q + R MK + +G
Sbjct: 391 INGS--RKLRIAKGSGMQVNQVNRLLKQFEETRKMMKQMSTFTKG 433
>gi|326692469|ref|ZP_08229474.1| signal recognition particle protein [Leuconostoc argentinum KCTC
3773]
Length = 491
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/424 (49%), Positives = 283/424 (66%), Gaps = 13/424 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ V++FV V E+A G ++ G+ P QQ+VKIV DEL MG E
Sbjct: 32 MREIRLALLEADVNYDTVKKFVANVREKASGADILEGLNPAQQVVKIVNDELTATMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L ++ PT+I++AGLQG GKTT AKLA LK + K+ +L+A DVYRPAAIDQL I
Sbjct: 92 VPLNKSQKIPTIIMMAGLQGAGKTTTVAKLAYKLKTEEKARPLLIAADVYRPAAIDQLEI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG + +PV+ GT+V P +I +QGL +A + D V +DTAGRLQID+ +M ELKDV
Sbjct: 152 LGRDLDIPVFQLGTDVDPREIVRQGLAKAAENKNDYVFIDTAGRLQIDEVLMQELKDVAE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ AA F + +TG +LTKLDGD+RGGAALS+++V+GKPI
Sbjct: 212 IAQPDEILLTVDAMTGQNAAETAKGFAEALDLTGVVLTKLDGDTRGGAALSIRDVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E+ + +K+ FDF
Sbjct: 272 KFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEEQAKQLEKMRQNTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q + V +MG M ++ MIPGM P A + K +EA++ +MTP ERE
Sbjct: 332 NDFVSQLKQVQKMGPMEDLLKMIPGMAN-NPALANLNIDAKQFAHLEAIVNSMTPAEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGV--MEGGSLPA 410
P+L+ +P RR+R+A +G+ +V++++ Q QMR M N G+ M GG+
Sbjct: 391 PDLI--NPSRRRRLAAGAGRPIVEVNRMIKQFDQMRKMMNQATNGNFGGIDKMLGGAGMD 448
Query: 411 LSNL 414
+S+L
Sbjct: 449 MSSL 452
>gi|429724972|ref|ZP_19259833.1| signal recognition particle protein [Prevotella sp. oral taxon 473
str. F0040]
gi|429151434|gb|EKX94302.1| signal recognition particle protein [Prevotella sp. oral taxon 473
str. F0040]
Length = 448
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 278/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G ++ V+P Q +VKIV DEL LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKTFTDTVKQKALGQNVLTAVKPSQLMVKIVHDELATLMGGES 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
++L ++RP+VIL+AGL G GKTT+S KLA +LK K+ + +L A D YRPAAI+QL +
Sbjct: 91 TDLKL-ENRPSVILMAGLNGAGKTTLSGKLALFLKTKKNRRPLLAACDTYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y E P +IA ++EAK K+ D VIVDTAGRL ID+ +M+E+ VK
Sbjct: 150 LAEQIDVPIYLNLEEKDPVKIALAAIQEAKAKSYDTVIVDTAGRLAIDETLMNEIAAVKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
NP E L VVDAMTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 ATNPDETLFVVDAMTGQDAVNTAKEFNSRLDFDGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME L+ F+P RMA RILGMGD++S VE+AQE +E+A ++Q+KI FDF
Sbjct: 270 KFVGTGEKMEALDVFHPSRMADRILGMGDIVSLVERAQEQYDEEEARKLQRKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + + +MG++ + MIPG+GK V ++++ +EA+I +MTP ER+ PE
Sbjct: 330 NDFLAQLQQIKKMGNIKDLAAMIPGVGKAIK-DVEVDDRAILGVEAIILSMTPYERQHPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S R++R+A+ SGKT Q V++L+ Q Q R MK + G
Sbjct: 389 VLNGS--RKERIAKGSGKTVQDVNRLIKQFDQTRKMMKMVSG 428
>gi|410594507|ref|YP_006951234.1| signal recognition particle protein [Streptococcus agalactiae
SA20-06]
gi|410518146|gb|AFV72290.1| Signal recognition particle protein [Streptococcus agalactiae
SA20-06]
Length = 521
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/409 (48%), Positives = 278/409 (67%), Gaps = 13/409 (3%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ+VKIV +EL L+G E S
Sbjct: 33 KEIRLALLEADVALPVVKTFIKHVRERAIGHEIINTLDPTQQIVKIVNEELTDLLGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E+ + PTVI++ GLQG GKTT + KLAN L K+ + M++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTVIMMVGLQGAGKTTFAGKLANKLIKEDNARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ GT +I +GLE+A++ D V++DTAGRLQID +M EL DVK +
Sbjct: 153 GSQINVPVFDMGTNYSAVEIVTKGLEQARENRNDYVLIDTAGRLQIDATLMQELHDVKAI 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ I+G +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAEEFNRQLSISGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRMA RILGMGD+L+ +E+A + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMASRILGMGDLLTLIERASQEYDEKRSMELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEERE 356
DF+ Q V MG M ++ M+PGM PA +V E E + K A++ +MTPEERE
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNFKVDENEIARK--RAIVSSMTPEERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P LL +P RR+R+A SG T V++ + Q + M+ GVM G
Sbjct: 390 NPNLL--NPSRRRRIAAGSGNTFVDVNKFIKDFNQAKQIMQ---GVMSG 433
>gi|154686014|ref|YP_001421175.1| hypothetical protein RBAM_015810 [Bacillus amyloliquefaciens FZB42]
gi|385264724|ref|ZP_10042811.1| signal recognition particle protein [Bacillus sp. 5B6]
gi|394993936|ref|ZP_10386675.1| signal recognition particle protein [Bacillus sp. 916]
gi|429505149|ref|YP_007186333.1| signal recognition particle protein [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
gi|154351865|gb|ABS73944.1| Ffh [Bacillus amyloliquefaciens FZB42]
gi|385149220|gb|EIF13157.1| signal recognition particle protein [Bacillus sp. 5B6]
gi|393805260|gb|EJD66640.1| signal recognition particle protein [Bacillus sp. 916]
gi|429486739|gb|AFZ90663.1| signal recognition particle protein [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
Length = 446
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 299/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQDVMQSLTPGQQVIKVVKEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIAVAKRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IA+Q +E+AK+++ D VI+DTAGRL ID +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIARQAIEKAKEEHHDYVILDTAGRLHIDHELMDELSGVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 VANPEEIFLVVDSMTGQDAVNVAKSFNDQLGLTGVILTKLDGDTRGGAALSIRAVTETPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEDKAKELEQKMRTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT E+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVLEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 DIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMTKG 436
>gi|22537142|ref|NP_687993.1| signal recognition particle protein Ffh [Streptococcus agalactiae
2603V/R]
gi|25011071|ref|NP_735466.1| hypothetical protein gbs1017 [Streptococcus agalactiae NEM316]
gi|76787075|ref|YP_329698.1| signal recognition particle protein [Streptococcus agalactiae A909]
gi|76797794|ref|ZP_00780060.1| signal recognition particle protein [Streptococcus agalactiae
18RS21]
gi|77405715|ref|ZP_00782802.1| signal recognition particle protein [Streptococcus agalactiae H36B]
gi|77412008|ref|ZP_00788337.1| signal recognition particle protein [Streptococcus agalactiae
CJB111]
gi|77413611|ref|ZP_00789797.1| signal recognition particle protein [Streptococcus agalactiae 515]
gi|406709443|ref|YP_006764169.1| signal recognition particle protein Ffh [Streptococcus agalactiae
GD201008-001]
gi|424049485|ref|ZP_17787036.1| signal recognition particle protein [Streptococcus agalactiae
ZQ0910]
gi|22534004|gb|AAM99865.1|AE014236_19 signal recognition particle protein Ffh [Streptococcus agalactiae
2603V/R]
gi|23095470|emb|CAD46676.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562132|gb|ABA44716.1| signal recognition particle protein [Streptococcus agalactiae A909]
gi|76586870|gb|EAO63362.1| signal recognition particle protein [Streptococcus agalactiae
18RS21]
gi|77160320|gb|EAO71445.1| signal recognition particle protein [Streptococcus agalactiae 515]
gi|77161964|gb|EAO72946.1| signal recognition particle protein [Streptococcus agalactiae
CJB111]
gi|77175711|gb|EAO78493.1| signal recognition particle protein [Streptococcus agalactiae H36B]
gi|389649156|gb|EIM70641.1| signal recognition particle protein [Streptococcus agalactiae
ZQ0910]
gi|406650328|gb|AFS45729.1| signal recognition particle protein Ffh [Streptococcus agalactiae
GD201008-001]
Length = 521
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/409 (48%), Positives = 279/409 (68%), Gaps = 13/409 (3%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL L+G E S
Sbjct: 33 KEIRLALLEADVALPVVKTFIKHVRERAVGHEIIDTLDPTQQIVKIVNEELTDLLGAETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K+ + M++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEDNARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ GT +I +GLE+A++ D V++DTAGRLQID +M EL DVK +
Sbjct: 153 GSQINVPVFDMGTNHSAVEIVTKGLEQARENRNDYVLIDTAGRLQIDATLMQELHDVKAI 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ I+G +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAEEFNRQLSISGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRMA RILGMGD+L+ +E+A + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMASRILGMGDLLTLIERASQEYDEKRSMELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEERE 356
DF+ Q V MG M ++ M+PGM PA +V E E + K A++ +MTPEERE
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNFKVDENEIARK--RAIVSSMTPEERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P+LL +P RR+R+A SG T V++ + Q + M+ GVM G
Sbjct: 390 NPDLL--NPSRRRRIAAGSGNTFVDVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|414564036|ref|YP_006042997.1| signal recognition particle protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338847101|gb|AEJ25313.1| signal recognition particle protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 523
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/407 (47%), Positives = 282/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ + E+AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRIRERAVGHEIIDTLDPTQQILKIVNEELTGILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
EL + PTVI++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 ELDKSPKIPTVIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT I GL +AK+ D V++DTAGRLQID+ +MDEL++VK +
Sbjct: 153 GQQINVPVFDMGTNHSAVDIVANGLAQAKENRHDYVLIDTAGRLQIDEKLMDELREVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 AKPNEILLVVDSMIGQEAANVAYEFNNQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A ++ +K + A++ +MTPEERE+P
Sbjct: 333 DFIEQLDQVQNMGPMEDLLKMIPGMA-TNPALANIKVDDKQIARKRAIVSSMTPEEREQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
ELL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 392 ELL--TPSRRRRIAAGSGNSFVEVNKFIKDFNQAKAMMQ---GVMSG 433
>gi|94994460|ref|YP_602558.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS10750]
gi|94547968|gb|ABF38014.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS10750]
Length = 522
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 35 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNEELTSILGSETA 94
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 95 EIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 154
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 155 GQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKAL 214
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 215 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 274
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 275 FTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 334
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 335 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKFDENQIARKRAIVSSMTPAERENPD 394
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 395 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|393784555|ref|ZP_10372718.1| signal recognition particle protein [Bacteroides salyersiae
CL02T12C01]
gi|392665536|gb|EIY59060.1| signal recognition particle protein [Bacteroides salyersiae
CL02T12C01]
Length = 440
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/402 (48%), Positives = 275/402 (68%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+R+ALL+ADV+ V + F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRKALLDADVNYKVAKTFTDTVKEKALGQNVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
E + K +P +IL++GLQG GKTT S KLA LK K+ + +LVA DVYRPAAI+QL +
Sbjct: 91 VE-IDTKGQPAIILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L EQ+ VP+Y+ P +IA+ ++EA+ K D+VIVDTAGRL +D+ MM E+ +K
Sbjct: 150 LAEQIDVPMYSEPDSKNPVEIAQNAIKEARAKGYDLVIVDTAGRLAVDEEMMKEIAAIKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AIQPNEILFVVDSMTGQDAVNTAKEFNDRLDFNGVVLTKLDGDTRGGAALSIRSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ ++ F+P RMA RILGMGD++S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFVGTGEKLDAIDQFHPARMADRILGMGDIVSLVERAQEQYDEEEAKRLQKKIAKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTPEER PE
Sbjct: 330 NDFLSQIAQIKKMGNLKELASMIPGVGKAIK-DIDIDDNAFKSIEAIIYSMTPEERSNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
+L S RR R+A+ SG T Q+V++L+ Q Q R MK + G
Sbjct: 389 ILNGS--RRTRIAKGSGTTIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|421532644|ref|ZP_15978998.1| signal recognition particle protein [Streptococcus agalactiae
STIR-CD-17]
gi|403642114|gb|EJZ02985.1| signal recognition particle protein [Streptococcus agalactiae
STIR-CD-17]
Length = 521
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/407 (48%), Positives = 275/407 (67%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL L+G E S
Sbjct: 33 KEIRLALLEADVALPVVKTFIKHVRERAVGHEIIDTLDPTQQIVKIVNEELTDLLGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E+ + PTVI++ GLQG GKTT + KLAN L K+ + M++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTVIMMVGLQGAGKTTFAGKLANKLIKEDNARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ GT +I +GLE+A++ D V++DTAGRLQID +M EL DVK +
Sbjct: 153 GSQINVPVFDMGTNYSAVEIVTKGLEQARENRNDYVLIDTAGRLQIDATLMQELHDVKAI 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ I+G +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAEEFNRQLSISGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRMA RILGMGD+L+ +E+A + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMASRILGMGDLLTLIERASQEYDEKRSMELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ M+PGM PA + E + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNFKVDENEIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG T V++ + Q + M+ GVM G
Sbjct: 392 NLL--NPSRRRRIAAGSGNTFVDVNKFIKDFNQAKQIMQ---GVMSG 433
>gi|395453961|dbj|BAM30300.1| signal recognition particle subunit [Streptococcus pyogenes M1 476]
Length = 529
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNEELTSILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ + D V++DTAGRLQID+ +M EL+DVK +
Sbjct: 153 GQQINVPVFDMGTDHSAVDIVRKGLEQARENHNDYVLIDTAGRLQIDEKLMGELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|119357327|ref|YP_911971.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
phaeobacteroides DSM 266]
gi|119354676|gb|ABL65547.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
phaeobacteroides DSM 266]
Length = 449
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/415 (49%), Positives = 278/415 (66%), Gaps = 5/415 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDI+RALL ADV+ V ++ V + E+++G +++ V P Q +VKIV DEL LMGGE
Sbjct: 31 MRDIKRALLNADVNYKVAKKLVDDIREKSLGEQVLKSVSPAQMIVKIVNDELTDLMGGEH 90
Query: 61 SELVFA-KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
L + K P +I++AGLQG GKTT AKLA LKK GK+ MLVA DVYRPAA+DQL
Sbjct: 91 QPLNLSPKKLPAIIMVAGLQGSGKTTFCAKLAKRLKKNGKNPMLVAADVYRPAAVDQLRT 150
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQV VPV++ E + A +GLE A+ DVVI+DTAGRLQID+ MM E + +K
Sbjct: 151 LGEQVDVPVFSI-DEQDAMKAAVKGLEAARLAAKDVVIIDTAGRLQIDEKMMAEAEALKH 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
L P E+L VVD+M GQEA FN + G +LTKLDGD+RGGAALS+++V KPI
Sbjct: 210 ALKPDELLFVVDSMMGQEAVNTAKAFNDRLDFDGVVLTKLDGDARGGAALSIRQVVEKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+++DL+ FYPDRMA RILGMGD++SFVEKAQE + E EMQKK+M FD
Sbjct: 270 KFISVGEKVDDLDLFYPDRMAQRILGMGDIVSFVEKAQETLDLEKTLEMQKKLMKNEFDL 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MGS+ +I M+PG+ K+ P Q E K +EAMI +MT +E+ PE
Sbjct: 330 NDFFDQLQQLKKMGSIQGLISMVPGLNKMVPKQEIE-NLDFKPIEAMINSMTKQEKTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
++ S RR+R+A+ SG Q+V+ L+ Q +M+ M+++ + + G NL
Sbjct: 389 IINGS--RRQRIAKGSGTRVQEVNMLLKQFGEMKKMMRSVTKLSQSGRKITSQNL 441
>gi|260886927|ref|ZP_05898190.1| signal recognition particle protein [Selenomonas sputigena ATCC
35185]
gi|330839284|ref|YP_004413864.1| signal recognition particle protein [Selenomonas sputigena ATCC
35185]
gi|260862989|gb|EEX77489.1| signal recognition particle protein [Selenomonas sputigena ATCC
35185]
gi|329747048|gb|AEC00405.1| signal recognition particle protein [Selenomonas sputigena ATCC
35185]
Length = 456
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/393 (50%), Positives = 276/393 (70%), Gaps = 6/393 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ F++ V E+AVG ++ + P Q ++KIV +EL +LMGG
Sbjct: 32 MREVRMALLEADVNFKVVKDFIKKVKERAVGQDVLDTLTPAQVVIKIVDEELTELMGGTQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S L + PTVI++AGLQG GKTT + KL LKKQGK +LVA D+YRPAA+ QL +L
Sbjct: 92 SRLNISSVPPTVIMMAGLQGAGKTTSAGKLGLSLKKQGKKPLLVAADIYRPAAVKQLQVL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+G+PV++ IA+ ++ A+ DVVI+DTAGRL ID+ +M ELKD+K
Sbjct: 152 GEQLGIPVFSMPQGTDAVTIARSSIDHARSHINDVVIIDTAGRLHIDEKLMQELKDIKAD 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +FN +GI G +LTKLDGD+RGGAALSVK V+G PIK
Sbjct: 212 VKPHEILLVVDAMTGQDAVNVAESFNEGLGIDGVVLTKLDGDARGGAALSVKAVTGCPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++E LEPF+PDRMA RILGMGDVLS +EKAQ E+A++M+KK+ A+F +
Sbjct: 272 FVGMGEKLEALEPFHPDRMASRILGMGDVLSLIEKAQSTFDAEEAKKMEKKLRKADFTLD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG----KITPAQVREAEKSLKIMEAMIEAMTPEERE 356
DFL Q + V ++GS +++GMIPGMG ++ + K ++ +EA+I++MTP+ER
Sbjct: 332 DFLAQMQKVRKLGSFEQILGMIPGMGGLKKQLQGQDIDLNGKEVRRIEAIIKSMTPKERA 391
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
++ S RRKR+A SG Q V++L+ Q
Sbjct: 392 DISIINGS--RRKRIALGSGTRVQDVNKLLKQF 422
>gi|291278684|ref|YP_003495519.1| signal recognition particle protein [Deferribacter desulfuricans
SSM1]
gi|290753386|dbj|BAI79763.1| signal recognition particle protein [Deferribacter desulfuricans
SSM1]
Length = 447
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/391 (48%), Positives = 277/391 (70%), Gaps = 6/391 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGE- 59
++ +R ALLEADV+ VV++F+ AV E+A+G +++ + PDQ +KIV DELV ++GG+
Sbjct: 31 VKQVRLALLEADVNYKVVKKFISAVQEKALGEEVLKSLTPDQVFIKIVHDELVNVLGGDD 90
Query: 60 -VSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLV 118
+++ PT I+L GLQG GKTT + KLA Y +K GK +LVA D+YRPAAIDQL
Sbjct: 91 QSTKIKLNPIPPTKIMLVGLQGSGKTTTAGKLAKYFQKNGKDVLLVADDIYRPAAIDQLE 150
Query: 119 ILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVK 178
ILG+Q+ V V++ E +IAK+ ++ AK DVVI+DTAGRL ID+ +M+ELK++K
Sbjct: 151 ILGKQLKVDVFSKRDEQDAVKIAKEAVQHAKSAAKDVVIIDTAGRLHIDETLMEELKNIK 210
Query: 179 RVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKP 238
+NP E+L V DAMTGQ+A + TFN + ITG ILTKLDGD+RGGAALS++EV+GKP
Sbjct: 211 EAINPDEILFVADAMTGQDAVNVAKTFNEMLDITGVILTKLDGDARGGAALSIREVTGKP 270
Query: 239 IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 298
+K VG GE+++ EPFYPDRMA RILGMGD+++ VE AQ+ +++++AE++ KI D
Sbjct: 271 LKFVGTGEKLDAFEPFYPDRMASRILGMGDIVTLVEMAQDAIEEDEAEKLATKIQKKGLD 330
Query: 299 FNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
FND L+Q + + +MGS ++ ++PG + V E+ + K +EA+I +MTP ER
Sbjct: 331 FNDMLQQMKMIKKMGSFESILKLLPGFSGLGNIDVDES--NFKRIEAIINSMTPLERTNY 388
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
++L S R++R+A+ SG + +V++L+ QL
Sbjct: 389 KILNAS--RKRRIAKGSGTSVSEVNKLIQQL 417
>gi|167758974|ref|ZP_02431101.1| hypothetical protein CLOSCI_01320 [Clostridium scindens ATCC 35704]
gi|167663381|gb|EDS07511.1| signal recognition particle protein [Clostridium scindens ATCC
35704]
Length = 449
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/397 (50%), Positives = 278/397 (70%), Gaps = 10/397 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++I+RALL ADV+ VV+ F++ V E+A+G ++ G+ P Q ++KIV +ELVKLMG E
Sbjct: 32 LKEIKRALLAADVNFKVVKDFIKNVQERAIGQDVMNGLNPGQMVIKIVNEELVKLMGSET 91
Query: 61 SELVFA-KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ S TVI++AGLQG GKTT +AKLA K +GK+ +LVA DVYRPAAI QL +
Sbjct: 92 TEIALQPGSAITVIMMAGLQGAGKTTTTAKLAGKYKVKGKNPLLVACDVYRPAAIKQLQV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
GE+ GV V+ G KPS IAK +E A+K +VI+DTAGRL ID+ MM EL ++K
Sbjct: 152 NGEKQGVEVFAMGESHKPSNIAKAAIEHAQKNGNRIVILDTAGRLHIDEDMMAELAEIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+N + +LV+DAMTGQ+A + FN +IG+ G I+TKLDGD+RGGAALSVK V+GKPI
Sbjct: 212 AVNVHQTILVIDAMTGQDAVNVAKEFNEKIGVDGVIVTKLDGDTRGGAALSVKAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
VG GE++ DLE FYPDRMA RILGMGDVL+ +EKA+ + +E A++M +K+ A FDF
Sbjct: 272 LYVGMGEKLSDLEQFYPDRMASRILGMGDVLTLIEKAEAEIDEEKAKQMSQKLKKAQFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIP----GMGK---ITPAQVREAEKSLKIMEAMIEAMTP 352
D+L+ + + MG + ++ M+P GMGK + Q +AEK++ MEAMI +MTP
Sbjct: 332 EDYLESVKQMKNMGGLGSIMSMMPALGAGMGKMKDLDEDQTAQAEKNMARMEAMIYSMTP 391
Query: 353 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
EER P+LL +P R+ R+A+ +G +V+++V Q
Sbjct: 392 EERRNPDLL--NPSRKHRIARGAGVDISEVNRMVKQF 426
>gi|308173560|ref|YP_003920265.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens DSM 7]
gi|384159419|ref|YP_005541492.1| signal recognition particle protein [Bacillus amyloliquefaciens
TA208]
gi|384164146|ref|YP_005545525.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens LL3]
gi|384168466|ref|YP_005549844.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens XH7]
gi|307606424|emb|CBI42795.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens DSM 7]
gi|328553507|gb|AEB23999.1| signal recognition particle protein [Bacillus amyloliquefaciens
TA208]
gi|328911701|gb|AEB63297.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens LL3]
gi|341827745|gb|AEK88996.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens XH7]
Length = 446
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 299/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQDVMKSLTPGQQVIKVVKEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIAVAKRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IA+Q +E+AK+++ D VI+DTAGRL ID +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIARQAIEKAKEEHHDYVILDTAGRLHIDHELMDELSGVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 VANPEEIFLVVDSMTGQDAVNVAKSFNDQLGLTGVVLTKLDGDTRGGAALSIRAVTETPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEDKAKELEQKMRTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT E+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVLEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 DIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMSKG 436
>gi|357639717|ref|ZP_09137590.1| signal recognition particle protein [Streptococcus urinalis
2285-97]
gi|418416438|ref|ZP_12989637.1| signal recognition particle protein [Streptococcus urinalis
FB127-CNA-2]
gi|357588171|gb|EHJ57579.1| signal recognition particle protein [Streptococcus urinalis
2285-97]
gi|410874256|gb|EKS22187.1| signal recognition particle protein [Streptococcus urinalis
FB127-CNA-2]
Length = 517
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/406 (48%), Positives = 280/406 (68%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDPTQQIVKIVNEELTGILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ M++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ +I +GLE+A++ D V++DTAGRLQID+ +M EL DVK +
Sbjct: 153 GQQIQVPVFDMGTDHSAVEIVTKGLEKAREDRNDYVLIDTAGRLQIDETLMAELHDVKSI 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAREFNNQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKRSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF+ Q V MG M ++ MIPGM G + ++ EK + A++ +MTP ERE PE
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAGNPALSNIKVDEKQVARKRAIVSSMTPAERENPE 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + V++ + Q + M+ GVM G
Sbjct: 393 LL--TPSRRRRIANGSGNSFVDVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|310828469|ref|YP_003960826.1| signal recognition particle protein [Eubacterium limosum KIST612]
gi|308740203|gb|ADO37863.1| signal recognition particle protein [Eubacterium limosum KIST612]
Length = 448
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/407 (49%), Positives = 286/407 (70%), Gaps = 6/407 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
R+I+ ALLEADV+ VV++F +AVSE+AVG +++ + P QQ +KIV DE+ KL+GGE+
Sbjct: 33 REIKLALLEADVNFKVVKQFTKAVSERAVGEEVLKSLTPGQQFIKIVNDEMTKLLGGELQ 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGK-SCMLVAGDVYRPAAIDQLVIL 120
++ F + + ++ GLQG GKTT +AK+AN L+K+ K +LVA DVYRPAAIDQL IL
Sbjct: 93 KMEFVEQGINIFMMVGLQGAGKTTTAAKIANLLRKEKKFKPLLVACDVYRPAAIDQLEIL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+++ +PVY E P IAK+ LE A+ + +++I+DTAGRLQID+ +M+EL D+K +
Sbjct: 153 GKELDIPVYLNKDEKDPRVIAKKALEFAETEGYNLMIIDTAGRLQIDETLMNELVDLKEL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
L PTE+LLVVD MTGQE+ + FN ++ ITG +LTKLDGD+RGGAALSV +GK IK
Sbjct: 213 LEPTEILLVVDGMTGQESVNVADEFNRQLEITGVVLTKLDGDTRGGAALSVTYTTGKTIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D+E FYPDRMA RILGMGDVLS ++KAQ ++ +E A +++K+ + FD N
Sbjct: 273 YIGTGEKLTDIELFYPDRMANRILGMGDVLSLIDKAQNMIDEEKARALEEKLRTQEFDLN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGK--ITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFL Q + + +GS+ ++ M+PG+ K + + AE K EA+I +MTPEER KP
Sbjct: 333 DFLDQMQQLQELGSIGDLMEMMPGVNKKMLKGMNMDAAEGQTKQTEAIIRSMTPEERLKP 392
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
++ S RRKR+A SG T V++++ Q + MK MG M+G
Sbjct: 393 GIINGS--RRKRIALGSGTTVSDVNRMLKGFEQTKKMMKQ-MGAMQG 436
>gi|21910377|ref|NP_664645.1| signal recognition particle -inhibited division protein
[Streptococcus pyogenes MGAS315]
gi|21904574|gb|AAM79448.1| putative signal recognition particle -inhibited division protein
[Streptococcus pyogenes MGAS315]
Length = 520
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNEELTSILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIDKSPKIPTIIMMVGLQGTGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|28895953|ref|NP_802303.1| signal recognition particle [Streptococcus pyogenes SSI-1]
gi|28811203|dbj|BAC64136.1| putative signal recognition particle [Streptococcus pyogenes SSI-1]
Length = 522
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 35 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNEELTSILGSETA 94
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 95 EIDKSPKIPTIIMMVGLQGTGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 154
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 155 GQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKAL 214
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 215 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 274
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 275 FTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 334
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 335 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 394
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 395 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|429749336|ref|ZP_19282465.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
332 str. F0381]
gi|429168518|gb|EKY10348.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
332 str. F0381]
Length = 442
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/390 (50%), Positives = 276/390 (70%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL+ADV+ + + F V E+A+G ++ ++P Q +VKIV+DEL +LMGG+
Sbjct: 31 LKEVRRALLDADVNYKIAKDFTNTVKEKAIGQQVLTTLQPGQLMVKIVKDELTQLMGGDA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSC-MLVAGDVYRPAAIDQLVI 119
+ + + PTVIL++GLQG GKTT S KLANYLK + +LVA DVYRPAAIDQL I
Sbjct: 91 AGVNLS-GNPTVILMSGLQGSGKTTFSGKLANYLKNKKNKKPLLVACDVYRPAAIDQLHI 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+QVGVPV++ P IA +G++ AK +++VVIVDTAGRL +D+ MM+E+ ++ +
Sbjct: 150 VGDQVGVPVFSDKGNNNPVDIALKGVQYAKDNHLNVVIVDTAGRLAVDEQMMNEISNIHQ 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+++K V KPI
Sbjct: 210 AIKPHETLFVVDAMTGQDAVNTAKAFNDVLNFDGVILTKLDGDTRGGAAITIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME ++ FYPDRMA RILGMGDV+S VE+AQE +E A ++QKKI F F
Sbjct: 270 KFVGTGEKMEAIDVFYPDRMADRILGMGDVVSLVERAQEQFDEEQARKLQKKIAKNQFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFL+Q + + RMGSM ++GM+PG+GK + + + K +EA+I +MTP+ER P
Sbjct: 330 DDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK-DLDIKDDAFKHIEAIIHSMTPKERSNPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
++ S R+KR+A+ SG+ Q+V+QL+ Q
Sbjct: 389 IIDMS--RKKRIAKGSGRELQEVNQLMKQF 416
>gi|402846973|ref|ZP_10895282.1| signal recognition particle protein [Porphyromonas sp. oral taxon
279 str. F0450]
gi|402267665|gb|EJU17060.1| signal recognition particle protein [Porphyromonas sp. oral taxon
279 str. F0450]
Length = 449
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/415 (49%), Positives = 286/415 (68%), Gaps = 6/415 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALLEADV+ V ++F + V E+A+G ++ VRP + +VKIV DEL LMGG+
Sbjct: 31 LKDVRRALLEADVNYNVAKKFTEDVKEKALGQDVLTAVRPGELMVKIVHDELANLMGGKA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+EL P +IL++GLQG GKTT S KLAN LK KQGK MLVAGDVYRPAAI+QL +
Sbjct: 91 AELNLT-GMPAIILMSGLQGSGKTTFSGKLANLLKTKQGKKPMLVAGDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L Q+ VPV+ P IA++G+ EA + DVVI+DTAGRL +D+ MM E++++KR
Sbjct: 150 LAGQLDVPVFFDLDSKDPVSIARRGVAEAMGQGCDVVIIDTAGRLAVDEEMMREIEEIKR 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P+E L VVD+MTGQ+A TFN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AIRPSETLFVVDSMTGQDAVNTAKTFNERLDFDGVVLTKLDGDTRGGAALSIRTVVDKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ L+ F+PDRMA RILGMGD++S VE+AQ++ + +A+ ++++I FDF
Sbjct: 270 KFVGMGEKMDALDVFHPDRMADRILGMGDIVSLVERAQQLYDEREAKRLEERIAKDQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + + +MG++ + MIPG+GK + + + K +EAMI +MTPEER KP
Sbjct: 330 NDFLAQIQQIKKMGNIKDLAAMIPGVGKALK-DIDIKDDAFKSIEAMIYSMTPEERAKPH 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+L RRKR+A SG + Q V++L+ Q Q R MK L G +GG +P + +
Sbjct: 389 ILDGH--RRKRIALGSGTSVQDVNKLLTQFTQTRKMMKTLQG-FKGGKMPKMPKI 440
>gi|339301556|ref|ZP_08650654.1| signal recognition particle protein [Streptococcus agalactiae ATCC
13813]
gi|417005226|ref|ZP_11943819.1| signal recognition particle protein [Streptococcus agalactiae FSL
S3-026]
gi|319745019|gb|EFV97347.1| signal recognition particle protein [Streptococcus agalactiae ATCC
13813]
gi|341577039|gb|EGS27447.1| signal recognition particle protein [Streptococcus agalactiae FSL
S3-026]
Length = 521
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/409 (48%), Positives = 278/409 (67%), Gaps = 13/409 (3%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL L+G E S
Sbjct: 33 KEIRLALLEADVALPVVKTFIKHVRERAVGHEIIDTLDPTQQIVKIVNEELTDLLGSETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K+ + M++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEDNARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ GT +I +GLE+A++ D V++DTAGRLQID +M EL DVK +
Sbjct: 153 GSQINVPVFDMGTNHSAVEIVTKGLEQARENRNDYVLIDTAGRLQIDATLMQELHDVKAI 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ I+G +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAEEFNRQLSISGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRMA RILGMGD+L+ +E+A + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMASRILGMGDLLTLIERASQEYDEKRSMELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEERE 356
DF+ Q V MG M ++ M+PGM PA +V E E + K A++ +MTPEERE
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNFKVDENEIARK--RAIVSSMTPEERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P LL +P RR+R+A SG T V++ + Q + M+ GVM G
Sbjct: 390 NPNLL--NPSRRRRIAAGSGNTFVDVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|336422979|ref|ZP_08603118.1| signal recognition particle protein [Lachnospiraceae bacterium
5_1_57FAA]
gi|336006825|gb|EGN36857.1| signal recognition particle protein [Lachnospiraceae bacterium
5_1_57FAA]
Length = 449
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/397 (50%), Positives = 278/397 (70%), Gaps = 10/397 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++I+RALL ADV+ VV+ F++ V E+A+G ++ G+ P Q ++KIV +ELVKLMG E
Sbjct: 32 LKEIKRALLAADVNFKVVKDFIKNVQERAIGQDVMNGLNPGQMVIKIVNEELVKLMGSET 91
Query: 61 SELVFA-KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ S TVI++AGLQG GKTT +AKLA K +GK+ +LVA DVYRPAAI QL +
Sbjct: 92 TEIALQPGSAITVIMMAGLQGAGKTTTTAKLAGKYKVKGKNPLLVACDVYRPAAIKQLQV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
GE+ GV V+ G KPS IAK +E A+K +VI+DTAGRL ID+ MM EL ++K
Sbjct: 152 NGEKQGVEVFAMGESHKPSNIAKAAIEHAQKNGNRIVILDTAGRLHIDEDMMAELAEIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+N + +LV+DAMTGQ+A + FN +IG+ G I+TKLDGD+RGGAALSVK V+GKPI
Sbjct: 212 AVNVHQTILVIDAMTGQDAVNVAKEFNEKIGVDGVIVTKLDGDTRGGAALSVKAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
VG GE++ DLE FYPDRMA RILGMGDVL+ +EKA+ + +E A++M +K+ A FDF
Sbjct: 272 LYVGMGEKLSDLEQFYPDRMASRILGMGDVLALIEKAEAEIDEEKAKQMSQKLKKAQFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIP----GMGK---ITPAQVREAEKSLKIMEAMIEAMTP 352
D+L+ + + MG + ++ M+P GMGK + Q +AEK++ MEAMI +MTP
Sbjct: 332 EDYLESVKQMKNMGGLGSIMSMMPALGAGMGKMKDLDEDQTAQAEKNMARMEAMIYSMTP 391
Query: 353 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
EER P+LL +P R+ R+A+ +G +V+++V Q
Sbjct: 392 EERRNPDLL--NPSRKHRIARGAGVDISEVNRMVKQF 426
>gi|409122949|ref|ZP_11222344.1| signal recognition particle protein [Gillisia sp. CBA3202]
Length = 442
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/390 (49%), Positives = 273/390 (70%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRAL+EADV+ + + F V E+A+G ++ ++P Q +VK+V+DEL +LMGGEV
Sbjct: 31 LKEVRRALVEADVNYKIAKEFTSTVKEKALGQDVLTALKPGQLMVKLVKDELTQLMGGEV 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
E+ + P+VIL++GLQG GKTT S KLAN+LK K+ K+ +LVA D+YRPAAI+QL I
Sbjct: 91 EEIDLS-GNPSVILMSGLQGSGKTTFSGKLANFLKTKKNKNPLLVACDIYRPAAINQLQI 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+GV V++ P I+K + AK+ +VVI+DTAGRL +D+AMM E+ ++
Sbjct: 150 VGEQIGVEVFSDVGNQDPVAISKAAIAHAKQNGFNVVIIDTAGRLAVDEAMMTEIANIHT 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+S+K V KPI
Sbjct: 210 AIKPEETLFVVDSMTGQDAVNTAKAFNDRLNFDGVILTKLDGDTRGGAAISIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++QKKI F F
Sbjct: 270 KFIGTGEKMDAIDVFYPSRMADRILGMGDVVSLVERAQEQYDEEEARKLQKKIAKNQFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFLKQ + +MGSM ++GMIPG GK+ + + + K +EA+I +MTP ER P
Sbjct: 330 DDFLKQLHQIKKMGSMKDLLGMIPGAGKMLK-DIDIDDDAFKHVEAIIYSMTPAERSTPT 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
++ + VR+KR+A SG + QQV+QL+ Q
Sbjct: 389 II--NAVRKKRIAGGSGTSVQQVNQLLKQF 416
>gi|386316967|ref|YP_006013131.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
gi|410494699|ref|YP_006904545.1| Signal recognition particle 54 kDa protein 2 [Streptococcus
dysgalactiae subsp. equisimilis AC-2713]
gi|417927774|ref|ZP_12571162.1| signal recognition particle protein [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|323127254|gb|ADX24551.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
gi|340765648|gb|EGR88174.1| signal recognition particle protein [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|410439859|emb|CCI62487.1| Signal recognition particle 54 kDa protein 2 [Streptococcus
dysgalactiae subsp. equisimilis AC-2713]
Length = 520
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNEELTSILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQINVPVFDMGTDHLAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|384265181|ref|YP_005420888.1| Signal recognition 54 kDa protein SRP54 [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|387898177|ref|YP_006328473.1| signal recognition particle, subunit [Bacillus amyloliquefaciens
Y2]
gi|452855544|ref|YP_007497227.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|380498534|emb|CCG49572.1| Signal recognition 54 kDa protein SRP54 [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|387172287|gb|AFJ61748.1| signal recognition particle, subunit [Bacillus amyloliquefaciens
Y2]
gi|452079804|emb|CCP21562.1| signal recognition particle-like (SRP) GTPase [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 446
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 299/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQDVMQSLTPGQQVIKVVKEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIAVAKRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IA+Q +E+AK+++ D VI+DTAGRL ID +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIARQAIEKAKEEHHDYVILDTAGRLHIDHELMDELSGVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 VANPEEIFLVVDSMTGQDAVNVAKSFNDQLGLTGVILTKLDGDTRGGAALSIRAVTETPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEDKAKELEQKMRTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT E+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVLEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 DIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMSKG 436
>gi|77409211|ref|ZP_00785921.1| signal recognition particle protein [Streptococcus agalactiae COH1]
gi|421147371|ref|ZP_15607061.1| signal recognition particle protein [Streptococcus agalactiae
GB00112]
gi|77172187|gb|EAO75346.1| signal recognition particle protein [Streptococcus agalactiae COH1]
gi|401686049|gb|EJS82039.1| signal recognition particle protein [Streptococcus agalactiae
GB00112]
Length = 521
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/409 (48%), Positives = 278/409 (67%), Gaps = 13/409 (3%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL L+G E S
Sbjct: 33 KEIRLALLEADVALPVVKTFIKHVRERAVGHEIIDTLDPTQQIVKIVNEELTDLLGAETS 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K+ + M++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEDNARPMMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ VPV+ GT +I +GLE+A++ D V++DTAGRLQID +M EL DVK +
Sbjct: 153 GSQINVPVFDMGTNHSAVEIVTKGLEQARENRNDYVLIDTAGRLQIDATLMQELHDVKAI 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ I+G +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAEEFNRQLSISGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRMA RILGMGD+L+ +E+A + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMASRILGMGDLLTLIERASQEYDEKRSMELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA----QVREAEKSLKIMEAMIEAMTPEERE 356
DF+ Q V MG M ++ M+PGM PA +V E E + K A++ +MTPEERE
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMLPGMAN-NPAMKNFKVDENEIARK--RAIVSSMTPEERE 389
Query: 357 KPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
P LL +P RR+R+A SG T V++ + Q + M+ GVM G
Sbjct: 390 NPNLL--NPSRRRRIAAGSGNTFVDVNKFIKDFNQAKQMMQ---GVMSG 433
>gi|71910728|ref|YP_282278.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS5005]
gi|410680584|ref|YP_006932986.1| signal recognition particle protein [Streptococcus pyogenes A20]
gi|71853510|gb|AAZ51533.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
pyogenes MGAS5005]
gi|409693173|gb|AFV38033.1| signal recognition particle protein [Streptococcus pyogenes A20]
Length = 520
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNEELTSILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ + D V++DTAGRLQID+ +M EL+DVK +
Sbjct: 153 GQQINVPVFDMGTDHSAVDIVRKGLEQARENHNDYVLIDTAGRLQIDEKLMGELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|303254469|ref|ZP_07340574.1| signal recognition particle protein [Streptococcus pneumoniae
BS455]
gi|303258923|ref|ZP_07344902.1| signal recognition particle protein [Streptococcus pneumoniae
SP-BS293]
gi|303264276|ref|ZP_07350196.1| signal recognition particle protein [Streptococcus pneumoniae
BS397]
gi|302598555|gb|EFL65596.1| signal recognition particle protein [Streptococcus pneumoniae
BS455]
gi|302639866|gb|EFL70322.1| signal recognition particle protein [Streptococcus pneumoniae
SP-BS293]
gi|302646088|gb|EFL76315.1| signal recognition particle protein [Streptococcus pneumoniae
BS397]
Length = 523
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/407 (48%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G + +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
E++ + P +I++ GLQG GKTT + KLAN LKK+ + +++A D+YRPAAIDQL L
Sbjct: 93 EIIKSPKIPIIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GTEV +I +QGLE+A+ + D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVDAM GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV+ ++GKPIK
Sbjct: 213 AQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ A EM +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V MG M ++ MIPGM PA ++ E+ + A++ +MTPEERE P
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAN-NPALQNMKVDERQIARKRAIVSSMTPEERENP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+LL +P RR+R+A SG T +V++ + Q + M+ GVM G
Sbjct: 392 DLL--NPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQ---GVMSG 433
>gi|251782371|ref|YP_002996673.1| signal recognition particle subunit [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242391000|dbj|BAH81459.1| signal recognition particle subunit [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
Length = 522
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 35 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNEELTSILGSETA 94
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 95 EIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 154
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 155 GQQINVPVFDMGTDHLAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKAL 214
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 215 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 274
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 275 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 334
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 335 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 394
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 395 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|417753165|ref|ZP_12401305.1| signal recognition particle protein [Streptococcus dysgalactiae
subsp. equisimilis SK1249]
gi|333770647|gb|EGL47657.1| signal recognition particle protein [Streptococcus dysgalactiae
subsp. equisimilis SK1249]
Length = 520
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNEELTSILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQINVPVFDMGTDHLAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--NPSRRRRIAAGSGNSFVKVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|312865260|ref|ZP_07725488.1| signal recognition particle protein [Streptococcus downei F0415]
gi|311099371|gb|EFQ57587.1| signal recognition particle protein [Streptococcus downei F0415]
Length = 524
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/407 (47%), Positives = 285/407 (70%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKRVRERAVGHEIIDTLDPTQQIIKIVNEELTAVLGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTIIMMIGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+V ++I K GL +A++ D V++DTAGRLQID+ +M EL+DVK +
Sbjct: 153 GQQISVPVFDMGTDVPATEIVKNGLAQARENRNDYVLIDTAGRLQIDETLMQELRDVKEL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV++++G+PIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAREFNQQLDITGVVLTKIDGDTRGGAALSVRQITGRPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEKRSAEIAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G + ++ EK + A++ +MTPEERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALSNIKVDEKDIARKRAIVSSMTPEERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM-GVMEG 405
LL +P RR+R+A SG + +V++ + R K +M GVM G
Sbjct: 393 LL--NPSRRRRIASGSGNSFVEVNKFIKDFN----RAKGMMQGVMNG 433
>gi|399926872|ref|ZP_10784230.1| signal recognition particle protein [Myroides injenensis M09-0166]
Length = 445
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/390 (49%), Positives = 271/390 (69%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL+ADV+ + + F V E+A+G ++ ++P Q ++KIV+DEL +LMGGE
Sbjct: 31 LKEVRRALLDADVNFKIAKDFTNKVKEKALGQDVLTTLQPGQLMIKIVKDELTQLMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + P++IL++GLQG GKTT S KLAN+LK K+ K+ +LVA DVYRPAAI+QL +
Sbjct: 91 AGINLS-GNPSIILMSGLQGSGKTTFSGKLANFLKTKKNKNVLLVACDVYRPAAINQLHV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+GV VY+ P QIA+ ++ AK +VVIVDTAGRL +D+ MM E+ ++
Sbjct: 150 VGEQLGVEVYSEEGNNNPVQIAENAIKHAKSNGFNVVIVDTAGRLAVDEEMMTEIANIHN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+S+K V KPI
Sbjct: 210 AIKPHETLFVVDSMTGQDAVNTAKAFNDRLNFDGVILTKLDGDTRGGAAISIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+M+ ++ FYP+RMA RILGMGDV+S VE+AQ +E+A ++QKKI F F
Sbjct: 270 KFIGTGEKMDAIDIFYPERMADRILGMGDVISLVERAQAQYDEEEARKIQKKIAKNEFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFL Q + V +MGSM ++GMIPG+GK V + + K +EA+I +MTP ER KP
Sbjct: 330 DDFLSQIQQVKKMGSMKDLVGMIPGVGKALK-DVEIEDDAFKHIEAIIHSMTPAERSKPS 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
LL R++R+A+ SG QQV+QL+ Q
Sbjct: 389 LL--DAKRKQRIAKGSGTDIQQVNQLLKQF 416
>gi|168188032|ref|ZP_02622667.1| signal recognition particle protein [Clostridium botulinum C str.
Eklund]
gi|169294122|gb|EDS76255.1| signal recognition particle protein [Clostridium botulinum C str.
Eklund]
Length = 451
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/388 (50%), Positives = 282/388 (72%), Gaps = 2/388 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ +VR+FV+ E+ +G +++ + P QQ+VKIV DEL +LMG
Sbjct: 32 MREVKLALLEADVNYKIVRQFVKTTGEKCLGEEVMKSLTPGQQVVKIVNDELKELMGSTE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ F+ TVI+L GLQG GKTT++ KLA L+K K +LVA D+YRPAAI QL ++
Sbjct: 92 SKIEFSNKGLTVIMLVGLQGAGKTTMAGKLALQLRKNNKKPLLVACDIYRPAAIKQLQVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV++ G +V P IAK +E AK N +VVI+DTAGRL ID+A+M+EL+++K
Sbjct: 152 GKQIDVPVFSMGDKVSPVDIAKASIEHAKNNNNNVVIIDTAGRLHIDEALMEELENIKIS 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVD+MTGQ+A + TFN ++ I+G ILTKLDGD+RGGAALS+K V+GKPIK
Sbjct: 212 VEPNEILLVVDSMTGQDAVNVSETFNNKLDISGVILTKLDGDTRGGAALSIKAVTGKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M DLE F+PDRMA RILGMGDVLS +EKAQE + +E A+E+ K+++ F+
Sbjct: 272 YVGLGEKMNDLEVFHPDRMASRILGMGDVLSLIEKAQEAIDEEKAKELGDKMLNLEFNLE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF + +MG ++++I M+PG+ ++ + EK +K +EAMI++MT +ER P
Sbjct: 332 DFKDSMAQMKKMGPLTKIIEMMPGVNSKQLQGLDLSRGEKEIKKIEAMIDSMTLKERRDP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLV 386
L+A SP R++R+A SG QQV++L+
Sbjct: 392 SLVAGSPSRKRRIANGSGSNVQQVNKLL 419
>gi|94544046|gb|ABF34094.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS10270]
Length = 522
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 35 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNEELTSILGSETA 94
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 95 EIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 154
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 155 GQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKAL 214
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 215 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 274
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 275 FTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 334
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 335 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 394
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 395 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|392948726|ref|ZP_10314329.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
pentosus KCA1]
gi|392436003|gb|EIW13924.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
pentosus KCA1]
Length = 484
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/414 (47%), Positives = 285/414 (68%), Gaps = 10/414 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A+G ++ G+ P QQ+VKIV +EL K MG +
Sbjct: 32 MREIRLALLEADVNFTVVKDFVKTVRERALGAKVLEGLNPAQQIVKIVDEELTKTMGEKA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PTVI++AGLQG GKTT KLA LK + K+ +++A DVYRPAAI+QL
Sbjct: 92 VPLNKSPKIPTVIMMAGLQGAGKTTTVGKLALKLKNEQKARPLMIAADVYRPAAIEQLQQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV+ GT+V P +I +QG+ +A++ + D V +DTAGRLQID+ +M+EL ++K
Sbjct: 152 VGQQIDVPVFQLGTDVDPVEIVRQGMAQAQENHNDYVFIDTAGRLQIDEQLMNELANIKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+++P E+LLV+DAMTGQ A FN ++ +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LVHPDEILLVIDAMTGQNAVNTAEGFNDKLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+M DL+ F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEEM KI FDF
Sbjct: 272 KFVGQGEKMTDLDVFHPDRMADRILGMGDMLTLIEKAQQQYDEKQAEEMNLKIQENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q V +MG+M ++ MIPGM PA + K + + A++ +MT E+
Sbjct: 332 NDFIDQLDQVDKMGNMEDIMKMIPGMAN-NPAMKNLNMDPKDIAHIRAIVYSMTKAEKAD 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G+ +
Sbjct: 391 PDLL--NPSRRRRIAAGSGRPIHEVNRMIKQFNQ----TKKMMNQMSKGNFSGM 438
>gi|422758876|ref|ZP_16812638.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
gi|322411711|gb|EFY02619.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
Length = 520
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNEELTSILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 YTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANMKVDENQIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|386362728|ref|YP_006072059.1| signal recognition particle protein [Streptococcus pyogenes Alab49]
gi|421892475|ref|ZP_16323130.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Streptococcus pyogenes NS88.2]
gi|350277137|gb|AEQ24505.1| signal recognition particle protein [Streptococcus pyogenes Alab49]
gi|379981771|emb|CCG26852.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Streptococcus pyogenes NS88.2]
Length = 520
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNEELTSILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|71903552|ref|YP_280355.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
pyogenes MGAS6180]
gi|71802647|gb|AAX72000.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
pyogenes MGAS6180]
Length = 522
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 35 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNEELTSILGSETA 94
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 95 EIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 154
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 155 GQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKAL 214
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 215 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 274
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 275 FTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 334
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 335 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 394
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 395 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|408401624|ref|YP_006859587.1| signal recognition particle subunit [Streptococcus dysgalactiae
subsp. equisimilis RE378]
gi|407967852|dbj|BAM61090.1| signal recognition particle subunit [Streptococcus dysgalactiae
subsp. equisimilis RE378]
Length = 522
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 35 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNEELTSILGSETA 94
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 95 EIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 154
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 155 GQQINVPVFDMGTDHLAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKAL 214
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 215 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 274
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 275 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 334
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 335 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 394
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 395 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|187934489|ref|YP_001885443.1| signal recognition particle protein [Clostridium botulinum B str.
Eklund 17B]
gi|187722642|gb|ACD23863.1| signal recognition particle protein [Clostridium botulinum B str.
Eklund 17B]
Length = 452
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/404 (45%), Positives = 286/404 (70%), Gaps = 5/404 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+ VS + VG ++ + P QQ++KIV +EL LMGG
Sbjct: 32 MREVKLALLEADVNYKVVKGFISTVSSKCVGNEVLESLTPGQQVIKIVNEELTNLMGGSE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ ++ S TVI+L GLQG GKTT+ KLA L+K K +LVA DVYRPAAI QL I+
Sbjct: 92 SKINYSSSGTTVIMLVGLQGAGKTTMCGKLALELRKNNKKPLLVACDVYRPAAIKQLEIV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV++ G +V P IAK G+ K +++I+DTAGRL ID+A+M EL+D+K
Sbjct: 152 GKQIEIPVFSMGDKVNPVDIAKAGIAHGKDNGNNIIIIDTAGRLHIDEALMQELQDIKEN 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP+E+LLVVD+MTGQ+A + +FN ++ +TG ILTKLDGD+RGGAALS++ ++ KPIK
Sbjct: 212 VNPSEILLVVDSMTGQDAVNVAESFNKDLDVTGVILTKLDGDTRGGAALSIRSITEKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D E F+PDRM+ RILGMGDVLS +EKAQ + +++A ++ K++++ F+FN
Sbjct: 272 YIGTGEKLSDFEVFHPDRMSSRILGMGDVLSLIEKAQSAIDEKEAADLGKRMLNQEFNFN 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
D+L + ++G +++++ MIPGM ++ + + E ++ +++I++MT +ER P
Sbjct: 332 DYLTAIEQMKKLGPLNKILEMIPGMNSKELQNVDLSKGEDAINKTKSVIQSMTEKERTNP 391
Query: 359 ELL---AESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
LL + + R+KRVA+ +G T Q+V++LV M+ M+++
Sbjct: 392 VLLMSGSTASSRKKRVARGAGTTIQEVNKLVKSYEMMKKNMRHM 435
>gi|139473726|ref|YP_001128442.1| signal recognition particle protein [Streptococcus pyogenes str.
Manfredo]
gi|134271973|emb|CAM30211.1| signal recognition particle protein [Streptococcus pyogenes str.
Manfredo]
Length = 520
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 282/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIINTLDPTQQILKIVNEELTSILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIDKSPKIPTIIMMVGLQGAGKTTFVGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|407795762|ref|ZP_11142720.1| signal recognition particle protein [Salimicrobium sp. MJ3]
gi|407020103|gb|EKE32817.1| signal recognition particle protein [Salimicrobium sp. MJ3]
Length = 446
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/400 (48%), Positives = 284/400 (71%), Gaps = 4/400 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
R++R ALLEADV+ VV+ F++ + E+AVG ++ + P QQ++KIV++EL +LMGG+ S
Sbjct: 33 REVRLALLEADVNFKVVKDFIKKIRERAVGQEVMESLTPGQQVIKIVKEELSELMGGDES 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVIL 120
+ AK PTVI++ GLQG GKTT + KLAN L+K + ML A DVYRPAAIDQL +
Sbjct: 93 RIAVAKKPPTVIMMVGLQGAGKTTTAGKLANLLRKSYNRKPMLAAADVYRPAAIDQLETI 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ PVY+ GT+ P IA+Q +EEAK++N D +I+DTAGRL ID +M EL VK
Sbjct: 153 GKQLDFPVYSEGTDADPVDIARQAVEEAKEQNHDYLIIDTAGRLHIDGELMGELGRVKEA 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+ LVVDAMTGQ+A + +F+ ++ I+G +LTKLDGD+RGGAALS+K V+GKPIK
Sbjct: 213 VNPDEIFLVVDAMTGQDAVNVAESFDEQLDISGVLLTKLDGDTRGGAALSIKAVTGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++ LE F+P+RMA RILGMGD+LS +EKA+ + ++ A+E++ K+ +A+F F+
Sbjct: 273 FVGMGEKLDALEVFHPERMASRILGMGDMLSLIEKAETQVDEKQAKELEAKMRNASFTFD 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q V MG + +I MIPG K+ +K + +EA+I++MT +ER P
Sbjct: 333 DFLEQMAQVKNMGPLDEIIEMIPGASKMKGLKNASFDDKQIVHVEAIIQSMTKKERNDPS 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ S R+KR+A+ SG + +V++L+ Q +M+ MK
Sbjct: 393 VMNAS--RKKRIAKGSGTSVSEVNRLLKQFNEMKKMMKQF 430
>gi|422416321|ref|ZP_16493278.1| signal recognition particle protein, partial [Listeria innocua FSL
J1-023]
gi|313623288|gb|EFR93529.1| signal recognition particle protein [Listeria innocua FSL J1-023]
Length = 415
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/397 (49%), Positives = 286/397 (72%), Gaps = 4/397 (1%)
Query: 5 RRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELV 64
R ALLEADV+ VV++F++ VSE+AVG +++ + P QQ++KIV++EL LMGGE S++
Sbjct: 1 RLALLEADVNFKVVKQFIKTVSERAVGADVMKSLTPGQQVIKIVQEELTSLMGGEESKIG 60
Query: 65 FAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQ 123
A PTVI++ GLQG GKTT S AN L KK + +LVA D+YRPAAI QL LG+Q
Sbjct: 61 TADRPPTVIMMVGLQGAGKTTTSXXXANLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQ 120
Query: 124 VGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRVLNP 183
+ +PV++ G +V P +IAKQ + +AK++++D VI+DTAGRL ID+ +MDELK VK + P
Sbjct: 121 LDMPVFSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDELKQVKEIATP 180
Query: 184 TEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVG 243
TE+LLVVD+MTGQ+A + +FN ++ ITG +LTKLDGD+RGGAALS++ V+GKPIK V
Sbjct: 181 TEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPIKFVA 240
Query: 244 RGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFL 303
GE+ME +E F+PDRMA RILGMGDVLS +EKAQ + E + M++K+ + +DFL
Sbjct: 241 TGEKMEAIETFHPDRMASRILGMGDVLSLIEKAQTDVDAEKMKAMEQKMKDNSMTLDDFL 300
Query: 304 KQTRTVARMGSMSRVIGMIPGMGKITPA-QVREAEKSLKIMEAMIEAMTPEEREKPELLA 362
Q + V +MG + ++ M+PG K+ ++ +K L +EA+I++MT E++ P+++
Sbjct: 301 DQLQQVKQMGPLDELLKMMPGANKMKGLDNMQVDDKQLGHIEAIIKSMTKNEKDNPDIIN 360
Query: 363 ESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
S RRKR+A+ SG+ Q++++L+ Q +M+ MK +
Sbjct: 361 AS--RRKRIARGSGRPIQEINRLLKQFAEMKKMMKQM 395
>gi|375362242|ref|YP_005130281.1| Signal recognition 54 kDa protein SRP54 [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|421731732|ref|ZP_16170855.1| signal recognition particle protein [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|451347031|ref|YP_007445662.1| signal recognition particle protein [Bacillus amyloliquefaciens
IT-45]
gi|371568236|emb|CCF05086.1| Signal recognition 54 kDa protein SRP54 [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|407073945|gb|EKE46935.1| signal recognition particle protein [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|449850789|gb|AGF27781.1| signal recognition particle protein [Bacillus amyloliquefaciens
IT-45]
Length = 446
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/407 (49%), Positives = 299/407 (73%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQDVMQSLTPGQQVIKVVKEELTELMGGEE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ AK PTVI++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIAAAKRPPTVIMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IA+Q +E+AK+++ D VI+DTAGRL ID +MDEL VK
Sbjct: 152 LGKQLDMPVFSLGDQVSPVEIARQAIEKAKEEHHDYVILDTAGRLHIDHELMDELSGVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V NP E+ LVVD+MTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS++ V+ PI
Sbjct: 212 VANPEEIFLVVDSMTGQDAVNVAKSFNDQLGLTGVILTKLDGDTRGGAALSIRAVTETPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++ LE F+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ + +F
Sbjct: 272 KFAGMGEKLDALEAFHPERMASRILGMGDVLTLIEKAQATVDEDKAKELEQKMRTMSFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT E+E+P
Sbjct: 332 DDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVLEKEQP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+++ S RRKR+A+ SG + Q+V++L+ Q +M+ MK + + +G
Sbjct: 392 DIINAS--RRKRIAKGSGTSVQEVNRLLKQFEEMKKMMKQMTNMSKG 436
>gi|363892796|ref|ZP_09319949.1| signal recognition particle protein [Eubacteriaceae bacterium CM2]
gi|361962560|gb|EHL15674.1| signal recognition particle protein [Eubacteriaceae bacterium CM2]
Length = 444
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/405 (48%), Positives = 280/405 (69%), Gaps = 3/405 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ FV+ V E+++G +++ + P QQ++KIV DEL +LMGG
Sbjct: 32 MREVKLALLEADVNYKVVKDFVKRVKERSIGEEVLKSLTPGQQVIKIVNDELKELMGGVQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L + PTVIL++GLQG GKTT + KLA LK+QGK+ MLVA DVYRPAA+ QL IL
Sbjct: 92 SKLNISSKPPTVILMSGLQGAGKTTTTGKLAYNLKQQGKNPMLVACDVYRPAAVKQLEIL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
++VG Y+ P QIA + EAK D+VI+DTAGRL ID+ +MDELK++K
Sbjct: 152 ADKVGAKFYSEENNNNPVQIATNSVAEAKTLGFDIVIIDTAGRLHIDEELMDELKNIKSS 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A +V TF+ +GI G IL+KLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VKPHEILLVVDAMTGQDAVNIVKTFDEALGIDGVILSKLDGDTRGGAALSIRAVTDKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE++ DLEPFYPDRMA RILGMGDVLS +EKAQ + + + + K+ + +F+F+
Sbjct: 272 FSATGEKIGDLEPFYPDRMANRILGMGDVLSLIEKAQSSVDMDAIKGLDSKMKNMDFNFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MGS+ +I MIPG+ K + +K L +EA+I++MT +ER P +
Sbjct: 332 DFLLQMQQIKKMGSLKSLIEMIPGLSK-QMKNIDVDDKELVKIEAIIQSMTKQERANPSI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+ S R+ R+A+ SG Q+++L+ Q + R MK + +G
Sbjct: 391 INGS--RKLRIAKGSGMQVNQINRLLKQFEETRKMMKQMSNFTKG 433
>gi|209559470|ref|YP_002285942.1| signal recognition particle subunit Ffh SRP54 [Streptococcus
pyogenes NZ131]
gi|209540671|gb|ACI61247.1| Signal recognition particle, subunit Ffh SRP54 [Streptococcus
pyogenes NZ131]
Length = 520
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNEELTSILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEEDARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANIAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|160938805|ref|ZP_02086156.1| hypothetical protein CLOBOL_03699 [Clostridium bolteae ATCC
BAA-613]
gi|158437768|gb|EDP15528.1| hypothetical protein CLOBOL_03699 [Clostridium bolteae ATCC
BAA-613]
Length = 458
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 288/401 (71%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++ ALLEADVS VV++F+ +V E+AVG + + P Q ++KIV +ELVKLMG E
Sbjct: 32 LKEVKMALLEADVSFRVVKQFIGSVQERAVGEDVFGSLTPGQTVIKIVTEELVKLMGSET 91
Query: 61 SELVFAKSRP-TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ S ++I++AGLQG GKTT +AK+A +K +G+ +L A D+YRPAAI+QL I
Sbjct: 92 TEISLKPSNEISIIMMAGLQGAGKTTTTAKIAAKMKAKGRKPLLAACDIYRPAAIEQLQI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
G++VG+PV++ G + KP IAK LE A K ++VVI+DTAGRL ID+ MMDEL ++K
Sbjct: 152 NGDRVGIPVFSMGNKNKPVDIAKAALEHASKNGLNVVILDTAGRLHIDETMMDELVEIKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
L+ + +LVVDAMTGQ+A + TFN +IGI G ILTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 NLDVCQTILVVDAMTGQDAVNVAGTFNDKIGIDGVILTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
VG GE++ DLE FYPDRMA RILGMGD+ S +EKA + +E A+E+ +K+ A FD+
Sbjct: 272 LYVGMGEKLSDLEQFYPDRMASRILGMGDIQSLIEKAAAEVDEEQAKELSQKLRKAEFDY 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
NDFL Q + + +MG M ++ M+PGMG +++ + E EKS+ +E++I +MT EER P
Sbjct: 332 NDFLTQMQQIKKMGGMGSILSMMPGMGNQLSGVDMDEGEKSMHRVESIILSMTKEERANP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
L+ +P R++R+A+ +G +V++LV Q QM+ MK +
Sbjct: 392 NLI--NPSRKQRIAKGAGVEVSEVNRLVKQFDQMKKMMKQM 430
>gi|254556541|ref|YP_003062958.1| signal recognition particle protein Ffh [Lactobacillus plantarum
JDM1]
gi|380032469|ref|YP_004889460.1| signal recognition particle protein Ffh [Lactobacillus plantarum
WCFS1]
gi|254045468|gb|ACT62261.1| signal recognition particle protein Ffh [Lactobacillus plantarum
JDM1]
gi|342241712|emb|CCC78946.1| signal recognition particle protein Ffh [Lactobacillus plantarum
WCFS1]
Length = 484
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/414 (48%), Positives = 283/414 (68%), Gaps = 10/414 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A+G ++ G+ P QQ+VKIV +EL K MG +
Sbjct: 32 MREIRLALLEADVNFTVVKDFVKTVRERALGAKVLEGLNPAQQIVKIVDEELTKTMGEKA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L + PTVI++AGLQG GKTT KLA LK +Q +++A DVYRPAAI+QL
Sbjct: 92 VPLNKSPKIPTVIMMAGLQGAGKTTTVGKLALKLKNEQDARPLMIAADVYRPAAIEQLQQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G Q+ VPV+ GT+V P +I +QG+ +AK+ + D V +DTAGRLQID+ +M+EL ++K
Sbjct: 152 VGRQIDVPVFQLGTDVDPVEIVRQGMAQAKENHNDYVFIDTAGRLQIDEQLMNELANIKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+++P E+LLV+DAMTGQ A FN ++ +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LVHPDEILLVIDAMTGQNAVNTAEGFNDKLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+M DL+ F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEEM KI FDF
Sbjct: 272 KFVGQGEKMTDLDVFHPDRMADRILGMGDMLTLIEKAQQQYDEKQAEEMNLKIQENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q V +MG+M ++ MIPGM PA + K + + A++ +MT E+
Sbjct: 332 NDFIDQLDQVDKMGNMEDIMKMIPGMAN-NPAMKNINMDPKDIAHIRAIVYSMTNAEKAD 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G+ +
Sbjct: 391 PDLL--NPSRRRRIAAGSGRPIHEVNRMIKQFNQ----TKKMMNQMSKGNFAGM 438
>gi|385809358|ref|YP_005845754.1| Signal recognition particle subunit SRP54 [Ignavibacterium album
JCM 16511]
gi|383801406|gb|AFH48486.1| Signal recognition particle subunit SRP54 [Ignavibacterium album
JCM 16511]
Length = 441
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/403 (49%), Positives = 287/403 (71%), Gaps = 9/403 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+IRR LL+ADV+ V + F+ V E+A+G +I + P Q + KI+ DELV+L+GG
Sbjct: 31 LREIRRILLDADVNYKVAKDFIDKVKEKALGKEVIASITPGQLITKIIYDELVELLGGGH 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
SE+ + T+IL+ GLQG GKTT SAKLA LK++ + +LVA D+YRPAAI+QL IL
Sbjct: 91 SEIFLNPTGATIILVVGLQGSGKTTFSAKLAKRLKERKRKVLLVAADIYRPAAIEQLKIL 150
Query: 121 GEQVGVPVYTAGTEVKPSQ-IAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
G+QV VPV++ E K ++ +A + L+ K+K D +I+DTAGRL +D+ MM E+ D+K
Sbjct: 151 GQQVDVPVFS--LEQKDARLVASESLKYVKEKGFDTLIIDTAGRLHVDEEMMKEVADIKE 208
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++ PTE L VVD+MTGQ+A FN + G +L+KLDGD+RGGAA+S++ V GKPI
Sbjct: 209 IVKPTETLFVVDSMTGQDAVNSAKAFNETVNFDGIVLSKLDGDARGGAAISIRSVVGKPI 268
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K V GE++E+L+ FYPDR+A RILG GD++S VEKAQE + + +A++M++K+ FDF
Sbjct: 269 KFVSNGEKLENLDVFYPDRLASRILGKGDIVSLVEKAQETIDEFEAKKMEEKLRKNKFDF 328
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
DFLKQ + + +MGS+S +IGMIPG+G +I AQ+ +K+L +EA+I +MT +ERE P
Sbjct: 329 EDFLKQIKLIKKMGSLSSLIGMIPGLGSQIKNAQI--DDKALVKVEAIINSMTKQERENP 386
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
++L S RRKR+A+ SG T Q V++L+ Q FQ RM ++M
Sbjct: 387 KVLNGS--RRKRIARGSGTTIQDVNRLIKQ-FQEMQRMMSMMN 426
>gi|326798855|ref|YP_004316674.1| signal recognition particle protein [Sphingobacterium sp. 21]
gi|326549619|gb|ADZ78004.1| signal recognition particle protein [Sphingobacterium sp. 21]
Length = 446
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 274/400 (68%), Gaps = 5/400 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++IR+ALL+ADV+ + F V ++A+G ++ + P Q L KI+ DEL +LMGG
Sbjct: 31 VKEIRKALLDADVNYKTAKAFTDEVKQKALGENVLTSISPGQLLTKIMNDELTQLMGGTA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
++L K+ PTVIL+AGL G GKTT + KLA YLK K+GK +LVAGDVYRPAAIDQL +
Sbjct: 91 TDLELGKN-PTVILIAGLNGAGKTTFTGKLAKYLKEKRGKKPLLVAGDVYRPAAIDQLEV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
L +QV VPVYT P IA++G+ AK+ +VVIVDTAGRL ID+A+M+E+ VK
Sbjct: 150 LAQQVDVPVYTNRESKDPIAIAEEGVAAAKRNGQNVVIVDTAGRLAIDEALMNEISAVKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
NP E+L VVD+MTGQ+A FN + TG +LTKLDGD+RGGAALS+K V KPI
Sbjct: 210 ATNPHEILFVVDSMTGQDAVNTAKVFNDRLDFTGVVLTKLDGDTRGGAALSIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+M+ L+ F+PDRMA RILGMGDV+S VE+AQ+ +++A +QKKI FDF
Sbjct: 270 KFIGTGEKMDALDVFHPDRMASRILGMGDVVSLVERAQQQFDEKEAAALQKKIRKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF+ Q + + +MG+M ++GMIPG+GK + + + K +EA+I +MTP ERE P+
Sbjct: 330 NDFISQIQQIKKMGNMKDLMGMIPGVGKAI-KDIDIDDDAFKPIEAIIGSMTPYERENPD 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ + RR R+A+ SG V++L+ Q MR MK
Sbjct: 389 AIDQK--RRMRIAKGSGTDINDVNKLMKQFSDMRKMMKQF 426
>gi|340349536|ref|ZP_08672547.1| signal recognition particle protein [Prevotella nigrescens ATCC
33563]
gi|339611074|gb|EGQ15913.1| signal recognition particle protein [Prevotella nigrescens ATCC
33563]
Length = 450
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/415 (47%), Positives = 283/415 (68%), Gaps = 5/415 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V ++A+G+ ++ V+P Q +VKIV DEL KLMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKSFTDTVKQKALGMNVLTAVKPGQLMVKIVHDELAKLMGGES 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L +++P +IL++GLQG GKTT S KLAN LK K+ K +LVA DVYRPAAI QL +
Sbjct: 91 VGLKI-ENKPAIILMSGLQGSGKTTFSGKLANLLKTKEHKKPLLVACDVYRPAAIQQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GE V VPVY+ + IA+ +++AK DVVI+DTAGRL +D MM+E++ +K
Sbjct: 150 VGESVDVPVYSEPDSKNVNAIAENAIKQAKANGNDVVIIDTAGRLAVDAEMMNEIESLKE 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++P E+L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 HVSPDEILFVVDSMTGQDAVNTAKEFNDRLDFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+M+ L+ F+P RMA RILGMGDV+S VE+AQE +E+A+ +QKKI+ FDF
Sbjct: 270 KFIGTGEKMDALDVFHPTRMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKILKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFYNQIQQIKKMGNLKDLAAMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKERTSPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
+L S RR+R+A+ SG Q+V++L+ Q Q R MK + G G + + N+
Sbjct: 389 VLNNS--RRQRIAKGSGTNIQEVNRLIKQFEQTRKMMKMVTGSKMAGMMGKMKNM 441
>gi|313115226|ref|ZP_07800709.1| signal recognition particle protein [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310622455|gb|EFQ05927.1| signal recognition particle protein [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 451
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/432 (49%), Positives = 282/432 (65%), Gaps = 28/432 (6%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGG-E 59
MR++R ALLEADV+ V + F VSE+A+G ++ + P QQ+VKIV +ELV LMGG E
Sbjct: 32 MREVRMALLEADVNYKVAKDFCAKVSERAMGQEVMESLTPAQQVVKIVNEELVALMGGSE 91
Query: 60 VSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
+ L T+I+L GLQG GKTT +AKLA Y KQG+ MLVA D+YRPAAIDQL +
Sbjct: 92 AARLNIKNKGQTIIMLCGLQGNGKTTHAAKLAKYFIKQGRRPMLVACDIYRPAAIDQLQV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q G PV+T KP +IAK+ L AK D+VI+DTAGRLQID +M EL D+K
Sbjct: 152 VGKQAGAPVFTL-PGAKPPEIAKKALAHAKDYGNDIVILDTAGRLQIDDVLMQELVDIKE 210
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ E LLVVDAM GQ+A + TFN ++GI G ILTK DGD+RGGAALSV V+GKPI
Sbjct: 211 AVPVDETLLVVDAMAGQDAVNVAKTFNEKVGIDGIILTKTDGDTRGGAALSVLAVTGKPI 270
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K G GE+++DL+ F+PDRMA RILGMGDVLS +E+AQE ++ AEE K++M FD
Sbjct: 271 KFQGTGEKLDDLDVFHPDRMASRILGMGDVLSLIERAQETADEKAAEETAKRMMENKFDM 330
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
ND L Q + +MG ++ M+PG I P+QV EK+ +EAMI +MT EEREKP
Sbjct: 331 NDMLDQFAQIRKMGGAGAMLSMLPGGSGIDPSQVD--EKAFDRIEAMIYSMTKEEREKPS 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNLEDALK 419
++ +P R++R+A SG T V++L+ Q F+M +M +K
Sbjct: 389 II--NPKRKRRIAAGSGTTVADVNKLLKQ-FEMMQKM---------------------MK 424
Query: 420 SEQKAPPGTARR 431
+K+P G ARR
Sbjct: 425 QFKKSPKGFARR 436
>gi|227872399|ref|ZP_03990746.1| signal recognition particle protein Ffh [Oribacterium sinus F0268]
gi|227841759|gb|EEJ52042.1| signal recognition particle protein Ffh [Oribacterium sinus F0268]
Length = 459
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/418 (46%), Positives = 292/418 (69%), Gaps = 12/418 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++R ALLEADV+ +V+ F+ V E A+G + + P Q ++KIVRDEL K+MG E
Sbjct: 32 LKEVRMALLEADVNFKLVKDFIAKVKESAIGEEVFSSLSPAQTVIKIVRDELTKMMGEEN 91
Query: 61 SELVFAKSRP----TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQ 116
+EL K RP TV+++ GLQG GKTT +AKLA +KQ + +LVA D+YRPAAI+Q
Sbjct: 92 TEL---KLRPQSEITVLMMVGLQGAGKTTTAAKLAGKFQKQHRKPLLVACDIYRPAAIEQ 148
Query: 117 LVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD 176
L + E++ +P ++ G +VKP +IAK+ EEAK K +++I+DTAGRLQID A+M+ELK
Sbjct: 149 LRVNAEKLSIPFFSLGNQVKPEEIAKKAYEEAKAKGYNLLILDTAGRLQIDDALMEELKR 208
Query: 177 VKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSG 236
+K + +L VDAMTGQEA + +F+ E+G+ G IL+K DGD+RGGAALS+K ++G
Sbjct: 209 MKSAVPVDWTILTVDAMTGQEAVNVAESFSKEVGVNGVILSKCDGDTRGGAALSIKAMTG 268
Query: 237 KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN 296
+PI +G GE++ DLEPFYPDRMAGRILGMGDVLS +EKAQ M +E A+E +K+
Sbjct: 269 QPILYLGMGEKLSDLEPFYPDRMAGRILGMGDVLSLIEKAQSEMDEEKAKESVRKLSKGQ 328
Query: 297 FDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAMIEAMTPEER 355
F+++DFL Q + ++G ++ ++ M+PGM K + + ++EK +K +++MI++MT +ER
Sbjct: 329 FNYDDFLDQMNQLQKLGGIAGILKMLPGMNKAMQGIDLEDSEKKMKQVKSMIQSMTFKER 388
Query: 356 EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG--GSLPAL 411
P+L+ +P R+KR+AQ +G +V++LV Q +M+ MK G M+G G P +
Sbjct: 389 ANPKLM--NPSRKKRIAQGAGVDIAEVNKLVKQFEEMQKMMKQFGGSMKGKHGGFPGM 444
>gi|334880634|emb|CCB81397.1| signal recognition particle protein Ffh [Lactobacillus pentosus
MP-10]
Length = 484
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/414 (47%), Positives = 284/414 (68%), Gaps = 10/414 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A+G ++ G+ P QQ+VKIV +EL K MG +
Sbjct: 32 MREIRLALLEADVNFAVVKDFVKTVRERALGAKVLEGLNPAQQIVKIVDEELTKTMGEKA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L + PTVI++AGLQG GKTT KLA LK +Q +++A DVYRPAAI+QL
Sbjct: 92 VPLNKSPKIPTVIMMAGLQGAGKTTTVGKLALKLKNEQNARPLMIAADVYRPAAIEQLQQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ VPV+ GT+V P +I +QG+ +A++ + D V +DTAGRLQID+ +M+EL ++K
Sbjct: 152 VGQQIDVPVFQLGTDVDPVEIVRQGMAQAQENHNDYVFIDTAGRLQIDEQLMNELANIKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+++P E+LLV+DAMTGQ A FN ++ +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LVHPDEILLVIDAMTGQNAVNTAEGFNDKLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+M DL+ F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEEM KI FDF
Sbjct: 272 KFVGQGEKMTDLDVFHPDRMADRILGMGDMLTLIEKAQQQYDEKQAEEMNLKIQENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q V +MG+M ++ MIPGM PA + K + + A++ +MT E+
Sbjct: 332 NDFIDQLDQVDKMGNMEDIMKMIPGMAN-NPAMKNLNMDPKDIAHIRAIVYSMTKAEKAD 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G+ +
Sbjct: 391 PDLL--NPSRRRRIAAGSGRPIHEVNRMIKQFNQ----TKKMMNQMSKGNFSGM 438
>gi|363890887|ref|ZP_09318181.1| signal recognition particle protein [Eubacteriaceae bacterium CM5]
gi|361962654|gb|EHL15763.1| signal recognition particle protein [Eubacteriaceae bacterium CM5]
Length = 444
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/405 (49%), Positives = 280/405 (69%), Gaps = 3/405 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ FV+ V E+++G +++ + P QQ++KIV DEL +LMGG
Sbjct: 32 MREVKLALLEADVNYKVVKDFVKRVKERSIGEEVLKSLTPGQQVIKIVNDELKELMGGVQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L + PTVIL++GLQG GKTT + KLA LK+QGK+ MLVA DVYRPAA+ QL IL
Sbjct: 92 SKLNISSKPPTVILMSGLQGAGKTTTTGKLAYNLKQQGKNPMLVACDVYRPAAVKQLEIL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
++VG Y+ P QIA + EAK D+VI+DTAGRL ID+ +MDELK++K
Sbjct: 152 ADKVGAKFYSEENNNNPVQIATNAVAEAKTLGFDIVIIDTAGRLHIDEELMDELKNIKSS 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A +V TF+ +GI G IL+KLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VKPHEILLVVDAMTGQDAVNIVKTFDEALGIDGVILSKLDGDTRGGAALSIRAVTDKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE++ DLEPFYPDRMA RILGMGDVLS +EKAQ + + + + K+ + +F+F+
Sbjct: 272 FSATGEKIGDLEPFYPDRMANRILGMGDVLSLIEKAQSSVDMDAIKGLDSKMKNMDFNFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + + +MGS+ +I MIPG+ K + +K L +EA+I++MT +ER P +
Sbjct: 332 DFLLQMQQIKKMGSLKSLIEMIPGLSK-QMKNIDVDDKELVKIEAIIQSMTKQERANPSI 390
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
+ S R+ R+A+ SG QV++L+ Q + R MK + +G
Sbjct: 391 INGS--RKLRIAKGSGMQVNQVNRLLKQFEETRKMMKQMSTFTKG 433
>gi|357055423|ref|ZP_09116491.1| signal recognition particle protein [Clostridium clostridioforme
2_1_49FAA]
gi|355382542|gb|EHG29639.1| signal recognition particle protein [Clostridium clostridioforme
2_1_49FAA]
Length = 458
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/401 (49%), Positives = 289/401 (72%), Gaps = 4/401 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++ ALLEADVS VV++F+ +V E+AVG + + P Q ++KIV +ELVKLMG E
Sbjct: 32 LKEVKMALLEADVSFRVVKQFIGSVQERAVGEDVFGSLTPGQTVIKIVTEELVKLMGSET 91
Query: 61 SELVFAKS-RPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
+E+ S ++I++AGLQG GKTT +AK+A +K +G+ +L A D+YRPAAI+QL I
Sbjct: 92 TEISLKPSGEISIIMMAGLQGAGKTTTTAKIAAKMKAKGRKPLLAACDIYRPAAIEQLQI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
G++VG+PV++ G + KP IAK +E A K ++VVI+DTAGRL ID+ MMDEL ++K
Sbjct: 152 NGDRVGIPVFSMGNKNKPVDIAKAAVEHASKNGLNVVILDTAGRLHIDETMMDELVEIKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
L+ + +LVVDAMTGQ+A + TFN +IGI G ILTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 NLDVCQTILVVDAMTGQDAVNVAGTFNDKIGIDGVILTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
VG GE++ DLE FYPDRMA RILGMGD+ S +EKA + +E A+E+ +K+ A FD+
Sbjct: 272 LYVGMGEKLSDLEQFYPDRMASRILGMGDIQSLIEKAAAEVDEEQAKELSQKLRKAEFDY 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
NDFL Q + + +MG M ++ M+PGMG +++ A + E EKS+ +E++I +MT EER P
Sbjct: 332 NDFLTQMQQIKKMGGMGSILSMMPGMGNQLSGADMDEGEKSMHRVESIILSMTKEERANP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
L+ +P R++R+A+ +G +V++LV Q QM+ MK +
Sbjct: 392 NLI--NPSRKQRIAKGAGVEVSEVNRLVKQFDQMKKMMKQM 430
>gi|417837347|ref|ZP_12483586.1| signal recognition particle, subunit Ffh SRP54 [Lactobacillus
johnsonii pf01]
gi|338762542|gb|EGP13810.1| signal recognition particle, subunit Ffh SRP54 [Lactobacillus
johnsonii pf01]
Length = 476
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/416 (47%), Positives = 286/416 (68%), Gaps = 11/416 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
R+IR ALLEADV+ VV+ F++ + ++A+G + + P QQ++KIV DEL K+MG E
Sbjct: 33 REIRLALLEADVNFKVVKDFIKKIKKEALGKEVQDSLNPGQQIIKIVDDELTKMMGEETV 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
L + PT+I++ GLQG GKTT KLANYL K K+ +L+AGD+YRPAAI+QL +
Sbjct: 93 SLNKSPHIPTIIMMVGLQGTGKTTTVGKLANYLMKNEKARPLLIAGDIYRPAAIEQLKQI 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPVY+ + ++I K GLEEA K D V++DTAGRL+ID+ +MDELK V V
Sbjct: 153 GQQLDVPVYSEDNQ-DVAEIVKHGLEEADKNKNDYVLIDTAGRLEIDEQLMDELKRVTEV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P LLVVDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V+G PI
Sbjct: 212 AHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIVLTKLDGDTRGGAALSIRAVTGLPII 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M +K+ FDFN
Sbjct: 272 FTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMAEKMRENTFDFN 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++ +MTPEERE P
Sbjct: 332 DFIDQMEQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQIDHIKAIVYSMTPEERENP 390
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
++L +P RR+R+A SG++ +V++++ Q Q K +M M G + L+NL
Sbjct: 391 DIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGDMGELANL 440
>gi|222151070|ref|YP_002560224.1| signal recognition particle protein [Macrococcus caseolyticus
JCSC5402]
gi|222120193|dbj|BAH17528.1| signal recognition particle protein [Macrococcus caseolyticus
JCSC5402]
Length = 450
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/407 (46%), Positives = 292/407 (71%), Gaps = 4/407 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VS++A+G +++ + P QQ++KIV++EL LMG E
Sbjct: 32 MREVRLALLEADVNFKVVKEFVKTVSDRAIGSEVMQSLTPGQQIIKIVQEELTTLMGSEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
+++ +K PTV+++ GLQG GKTT + KLA + KK K +LVA D+YRPAAI QL
Sbjct: 92 TQINMSKKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVACDIYRPAAIQQLQT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ +PV+T G +V P +I ++ L+ AK++++D VI+DTAGRL ID+A+M+EL +VK
Sbjct: 152 VGKQIDIPVFTLGDQVSPKEITERALQHAKEEHLDFVIIDTAGRLHIDEALMNELVEVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVD+MTGQ+A + +F+ ++ ITG LTKLDGD+RGGAALS++ V+ KPI
Sbjct: 212 ISQPDEIMLVVDSMTGQDAVNVAESFDNQLDITGVTLTKLDGDTRGGAALSIRSVTQKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG E+++ LEPF+P+RMA RILGMGDVLS +EKAQ + + A+E+++K+ +++F F
Sbjct: 272 KFVGMSEKLDGLEPFHPERMASRILGMGDVLSLIEKAQSQVDESKAKELEQKMKTSSFTF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V +G + ++ MIPG K+ V K + ++A+I +MT EER P
Sbjct: 332 DDFLEQLEQVKALGPLDELLKMIPGANKMKGLNNVNMNAKQIDHVQAIIRSMTKEERNNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
++ S R+KR+A+ SG++ +V++L+ Q +M+ MK G+ +G
Sbjct: 392 AIINVS--RKKRIAKGSGRSLSEVNKLIKQFEEMKKMMKQFTGMKKG 436
>gi|218887972|ref|YP_002437293.1| signal recognition particle protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758926|gb|ACL09825.1| signal recognition particle protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 518
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/403 (48%), Positives = 279/403 (69%), Gaps = 4/403 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VVR F++ V E+ +G +++ + P QQ+VKIV DELV+L+GG
Sbjct: 31 LREVRLALLEADVNFKVVRDFIERVRERCLGQDVLKSLTPAQQVVKIVHDELVELLGGGT 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
++L +P VI++ GLQG GKTT SAK+AN L+KQ LV DVYRPAAIDQL L
Sbjct: 91 TQLDLRGKQPYVIMMVGLQGSGKTTSSAKIANLLRKQKMRPYLVPADVYRPAAIDQLHTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
+Q+ +P Y + + P IA +E+A++K +VVIVDTAGRL ID+ +M EL +K
Sbjct: 151 AKQLDIPAYPSAPGMNPVDIAVAAVEDAREKQCNVVIVDTAGRLHIDETLMQELVSIKGR 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+L V DAMTGQ+A + +FN + I+G +LTK+DGD+RGGAALS++ V+GKP+K
Sbjct: 211 VEPQEILFVADAMTGQDAVTVAESFNTALDISGVVLTKMDGDARGGAALSIRSVTGKPVK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++ D+E F+PDR+AGRILGMGD+++ +EKAQ ++ E+AEE+ +K A FD
Sbjct: 271 FVGMGEKLSDIEVFHPDRVAGRILGMGDMMTLIEKAQSTIKAEEAEELGRKFQKAEFDLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF Q R + ++GS+ ++ +IPGMG + ++ EK + +EA+I +MT +ER P
Sbjct: 331 DFRTQMRRLKKLGSLEGILKLIPGMGALREKLGEMNVPEKEMGRVEAIINSMTMQERRNP 390
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
++L S RR+R+A SG T Q V+QL+ QMR MK +MG
Sbjct: 391 KVLNGS--RRQRIAMGSGTTVQDVNQLINNFEQMRGMMKKVMG 431
>gi|433462612|ref|ZP_20420189.1| signal recognition particle protein [Halobacillus sp. BAB-2008]
gi|432188560|gb|ELK45741.1| signal recognition particle protein [Halobacillus sp. BAB-2008]
Length = 446
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/400 (47%), Positives = 286/400 (71%), Gaps = 4/400 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
R++R ALLEADV+ VV+ FV+ + E+A+G ++ + P QQ++K+V++EL +LMGG S
Sbjct: 33 REVRLALLEADVNFKVVKDFVKRIKERAIGQEVMESLTPGQQVIKVVKEELTELMGGNES 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQ-GKSCMLVAGDVYRPAAIDQLVIL 120
++ AK PTVI++ GLQG GKTT + KLAN L+K +S +LVA D+YRPAAI QL L
Sbjct: 93 KIAVAKRPPTVIMMVGLQGAGKTTTTGKLANLLRKSYNRSPLLVAADIYRPAAIKQLETL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV+ GTE P IAK + +AK+++ D V++DTAGRL ID +M EL+++K
Sbjct: 153 GKQLSMPVHAEGTEANPVDIAKNAIAKAKEEHYDYVLIDTAGRLHIDGDLMGELQEIKEA 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+ LVVDAMTGQ+A + +F+ ++ ++G +LTKLDGD+RGGAALS+K V+GKPIK
Sbjct: 213 VNPDEIFLVVDAMTGQDAVNVAESFDEQLDVSGVLLTKLDGDTRGGAALSIKAVTGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++ LE F+P+RMA RILGMGD+L+ +EKAQ + ++ A E++ K+ +A+F F
Sbjct: 273 FAGMGEKLDQLETFHPERMASRILGMGDMLTLIEKAQTQVDEKQARELETKMRTASFTFE 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL+Q + V MG + ++ MIPG K+ Q V +K + +EA+I++MT ER+ P
Sbjct: 333 DFLEQMQQVKNMGPLDEILNMIPGANKMKGLQNVSFDDKQIVHVEAIIQSMTKHERQDPS 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ S R+KR+A+ SG + +V++L+ Q +M+ MK +
Sbjct: 393 VMNAS--RKKRIAKGSGTSVSEVNRLLKQFEEMKKMMKQM 430
>gi|241895650|ref|ZP_04782946.1| signal recognition particle protein Ffh [Weissella
paramesenteroides ATCC 33313]
gi|241871228|gb|EER74979.1| signal recognition particle protein Ffh [Weissella
paramesenteroides ATCC 33313]
Length = 485
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/409 (49%), Positives = 277/409 (67%), Gaps = 9/409 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A G ++ G+ P QQ+V IV DEL +MG
Sbjct: 32 MREIRLALLEADVNFKVVKDFVRNVREKASGAKVLEGLNPAQQIVSIVNDELTAMMGESA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L + PTVI++ GLQG GKTT + KLA LK +Q +++A DVYRPAAI+QL
Sbjct: 92 VALNKSPKIPTVIMMVGLQGAGKTTTAGKLALKLKNEQNARPLMIAADVYRPAAIEQLKT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+ VPV+ GT+V P +I K G+E+A + D V +D AGRLQID+ +M EL DVK
Sbjct: 152 LGEQIDVPVFDMGTDVNPREIVKAGMEKAAELKSDYVFIDAAGRLQIDEELMQELADVKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ +P E++LVVDAMTGQ A FN + ITG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IAHPDEIMLVVDAMTGQNAVETAEGFNDRLDITGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ ++ A E +K+ S FDF
Sbjct: 272 KFVGQGEKMTDLDIFYPDRMASRILGMGDLLTLIEKAQKDYDEKQANETMEKMKSNTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q + MG + ++ MIPGM PA + K + + A++ +MTPEERE
Sbjct: 332 NDFIDQMDQLQNMGPLEDIMKMIPGMAN-NPALKNAKIDPKDMAHIRAIVMSMTPEEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
P++L +P R++R+A +G+ +V+++V Q QM+ K + GVM G
Sbjct: 391 PDVL--NPSRKRRLAAGAGRPVVEVNRMVKQFNQMK---KMMSGVMNGN 434
>gi|306827321|ref|ZP_07460608.1| signal recognition particle protein [Streptococcus pyogenes ATCC
10782]
gi|304430468|gb|EFM33490.1| signal recognition particle protein [Streptococcus pyogenes ATCC
10782]
Length = 520
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNEELTSILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEEDARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 153 GQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 333 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 393 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|326335869|ref|ZP_08202048.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325692013|gb|EGD33973.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 448
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/390 (49%), Positives = 272/390 (69%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL+ADV+ + + F V +A+G ++ ++P Q +VKIVRDEL +LMGG+
Sbjct: 31 LKEVRRALLDADVNYSIAKDFTSKVKAKALGQNVLTTLQPGQLMVKIVRDELTELMGGDA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + P+VIL++GLQG GKTT S KLAN+LK K+ K +LVA DVYRPAAIDQL I
Sbjct: 91 TGINLS-GNPSVILMSGLQGSGKTTFSGKLANFLKTKKNKKPLLVACDVYRPAAIDQLHI 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+GVPV++ P IA++GL+ AK +VVI+DTAGRL D+ MM E+ ++ +
Sbjct: 150 VGEQIGVPVFSERGNNNPVDIAQKGLQYAKSNGFNVVIIDTAGRLAADEQMMKEIAEIHK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAA+S+K V KPI
Sbjct: 210 AVNPQETLFVVDAMTGQDAVNTAKAFNDVLDFDGVILTKLDGDTRGGAAISIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+M+ ++ FYPDRMA RILGMGDV+S VE+AQE +E A ++QKKI F F
Sbjct: 270 KFVGTGEKMDAIDVFYPDRMADRILGMGDVVSLVERAQEQFDEEQARKLQKKIAKNQFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFL Q + + +MGSM ++GM+PG+GK + ++ + K +EA+I +MTP ER P
Sbjct: 330 DDFLAQIQQIKKMGSMKDLLGMLPGVGKAVK-DLDISDDAFKYIEAIIFSMTPAERSNPS 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
++ S R+ R+A+ SG+ +V+QL+ Q
Sbjct: 389 IINTS--RKNRIAKGSGRNIAEVNQLLKQF 416
>gi|94988647|ref|YP_596748.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS9429]
gi|94992471|ref|YP_600570.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS2096]
gi|417856844|ref|ZP_12501903.1| signal recognition particle protein [Streptococcus pyogenes HKU
QMH11M0907901]
gi|94542155|gb|ABF32204.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS9429]
gi|94545979|gb|ABF36026.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
pyogenes MGAS2096]
gi|387933799|gb|EIK41912.1| signal recognition particle protein [Streptococcus pyogenes HKU
QMH11M0907901]
Length = 522
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/406 (47%), Positives = 283/406 (69%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+A+G +I + P QQ++KIV +EL ++G E +
Sbjct: 35 KEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNEELTSILGSETA 94
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 95 EIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 154
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ I ++GLE+A++ D V++DTAGRLQID+ +M+EL+DVK +
Sbjct: 155 GQQINVPVFDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKAL 214
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 215 AQPDEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIK 274
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 275 FTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 334
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q V MG M ++ MIPGM G A ++ E + A++ +MTP ERE P+
Sbjct: 335 DFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPD 394
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 395 LL--NPSRRRRIAAGSGNSFVEVNKFIKDFNQAKSMMQ---GVMSG 435
>gi|291519525|emb|CBK74746.1| signal recognition particle protein [Butyrivibrio fibrisolvens
16/4]
Length = 446
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/407 (48%), Positives = 285/407 (70%), Gaps = 8/407 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++ ALLEADV+ VV++F V+E+A+G ++ G+ P Q ++KIV +ELV LMG EV
Sbjct: 32 LKEVKMALLEADVNFKVVKQFTNTVTERAIGSDVMNGLNPGQMVIKIVNEELVNLMGSEV 91
Query: 61 SELVFAKSRP-TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
+++ + T I++ GLQG GKTT +AKLA +K++GK +LVA D+YRPAAI+QL I
Sbjct: 92 TDITYGTGGAITTIMMVGLQGAGKTTTTAKLAGKVKQRGKKPLLVACDIYRPAAIEQLQI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
G++ GV V++ G + KP +IAK+ ++ AKK DVVI DTAGRL ID+ MM+EL +K
Sbjct: 152 NGKKQGVEVFSLGDKEKPVKIAKEAMDYAKKNGFDVVIFDTAGRLHIDEDMMNELASIKS 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++ +LVVDAMTGQ+A + +TF+ +IGI G I+TKLDGD+RGGAALS+K V+GKPI
Sbjct: 212 NIDILNTILVVDAMTGQDAVNVSSTFDEKIGIDGVIITKLDGDTRGGAALSIKAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
G GE++ DLE F+PDRMA RILGMGDVLS +EKA+ + ++ A + KK+ A+FDF
Sbjct: 272 LYAGMGEKLSDLEQFHPDRMASRILGMGDVLSLIEKAEAEIDKDAALALSKKVKKASFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA--EKSLKIMEAMIEAMTPEEREK 357
ND+L + ++G ++ ++GM+PGM AQ+ A +K L +EA+I +MTP ERE
Sbjct: 332 NDYLTSMEQMKKLGGLTSILGMMPGMNASQMAQLENAVDDKKLAHIEAIILSMTPAEREN 391
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK---NLMG 401
P+LL +P R+ R+A +G +V++ V Q Q + MK N+MG
Sbjct: 392 PKLL--NPSRKHRIAAGAGLDIAEVNRFVKQFEQSKKMMKQMPNMMG 436
>gi|332524016|ref|ZP_08400268.1| signal recognition particle protein [Streptococcus porcinus str.
Jelinkova 176]
gi|332315280|gb|EGJ28265.1| signal recognition particle protein [Streptococcus porcinus str.
Jelinkova 176]
Length = 517
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/406 (48%), Positives = 278/406 (68%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKHVRERAVGHEIIDTLDPTQQIVKIVNEELTGILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ A PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 TIEKAPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEEDARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ +I +QGL AK+ D V++DTAGRLQID+ +M EL+DVK +
Sbjct: 153 GQQINVPVFDMGTDHSAVEIVRQGLSLAKENRNDYVLIDTAGRLQIDEKLMTELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVADEFNKQLEITGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASHEYDEQKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF+ Q V MG M ++ MIPGM G A ++ EK + A++ +MT ERE P+
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANIKIDEKQIARKRAIVSSMTKAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + V++ + Q + M+ GVM G
Sbjct: 393 LL--NPSRRRRIAAGSGNSFVDVNKFIKDFNQAKAMMQ---GVMSG 433
>gi|333398238|ref|ZP_08480051.1| signal recognition particle protein [Leuconostoc gelidum KCTC 3527]
Length = 488
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/417 (49%), Positives = 275/417 (65%), Gaps = 13/417 (3%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ V++FV V E+A G ++ G+ P QQ+VKIV DEL MG E
Sbjct: 32 MREIRLALLEADVNYDTVKKFVANVREKASGADILEGLNPAQQVVKIVNDELTITMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PT+I++AGLQG GKTT AKLA LKK+ + +L+A DVYRPAAIDQL I
Sbjct: 92 VPLNKSPKIPTIIMMAGLQGAGKTTTVAKLAYKLKKEENARPLLIAADVYRPAAIDQLEI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG + +PV+ GT V P +I +QGL +A + D V +DTAGRLQID +M ELKDV
Sbjct: 152 LGRDLEIPVFQLGTAVNPREIVRQGLAKAAENKNDYVFIDTAGRLQIDDVLMQELKDVAE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAALS+++V+GKPI
Sbjct: 212 IAQPDEILLTVDAMTGQNAAETAKGFSAALDLTGVVLTKLDGDTRGGAALSIRDVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E + +K+ FDF
Sbjct: 272 KFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEAQAKQLEKMRQNTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q + V MG M ++ MIPGM P A V K +EA++ +MTP ERE
Sbjct: 332 NDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNIDAKQFSHLEAIVNSMTPAERED 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMK-----NLMGV--MEGGS 407
P+L+ +P RR+R+A +G+ +V++++ Q QMR M N G+ M GGS
Sbjct: 391 PDLI--NPSRRRRLASGAGRPIVEVNRMIKQFDQMRKMMNQATNGNFGGIDKMMGGS 445
>gi|212639591|ref|YP_002316111.1| signal recognition particle GTPase [Anoxybacillus flavithermus WK1]
gi|212561071|gb|ACJ34126.1| Signal recognition particle GTPase [Anoxybacillus flavithermus WK1]
Length = 446
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/391 (49%), Positives = 289/391 (73%), Gaps = 4/391 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQEVMKSLTPGQQVIKVVKEELTELMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ + PTV+++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIAVSNRPPTVVMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+++ D V++DTAGRL ID+A+MDELK +K
Sbjct: 152 LGKQLNIPVFSLGDQVSPVEIAKQAIAKAKEEHYDYVLIDTAGRLHIDEALMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VTKPDEIFLVVDAMTGQDAVNVAQSFNEQLGLTGVILTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +A+F
Sbjct: 272 KFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQAAVDEEKAKELEQKMRTASFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V ++G + ++ M+PG K+ ++ EK + +EA+I +MT EE+ P
Sbjct: 332 DDFLEQLGQVRKLGPLDELLKMLPGANKVKGLNNLQIDEKQISRVEAIIRSMTKEEKMNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
+++ S R+KR+A+ SG T Q V++L+ Q
Sbjct: 392 DIINSS--RKKRIAKGSGTTVQDVNRLLKQF 420
>gi|325294335|ref|YP_004280849.1| signal recognition particle protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064783|gb|ADY72790.1| signal recognition particle protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 448
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/392 (50%), Positives = 281/392 (71%), Gaps = 6/392 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+I+ ALLEADV+ VV F++ + E+A+G +I+GV P QQLVKIV DELV+ +GGE
Sbjct: 31 LREIKLALLEADVNYRVVSNFIKDIKEKALGAKVIKGVNPAQQLVKIVHDELVQTLGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+L K +P+VILL GLQG GKTT +AKLANYLKKQGK +L + DVYRPAA+ QL L
Sbjct: 91 EKLNL-KGKPSVILLIGLQGSGKTTTAAKLANYLKKQGKRVLLTSVDVYRPAAMLQLKKL 149
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+G+PV+ E +IAK L +AK ++ DV++VDTAGRL ID+ +++E + +K
Sbjct: 150 GDQIGIPVFLEEKEKDAVKIAKDALLKAKDESYDVLVVDTAGRLHIDEELLEEARKIKEE 209
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E L V+D+MTGQE+ + F+ +G+TG +LTK+D D+RGG ALSVK V+GKPIK
Sbjct: 210 VVPDETLFVIDSMTGQESVNIAKAFDERVGMTGIVLTKMDSDARGGVALSVKGVTGKPIK 269
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+++D EPFYPDR+A RILGMGD++S VEKAQEV+ +++A MQ+K++S F
Sbjct: 270 FAGVGEKIDDFEPFYPDRVASRILGMGDIVSLVEKAQEVIDEKEALSMQEKLLSGEFTLE 329
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREA--EKSLKIMEAMIEAMTPEEREK 357
DF +Q R + R+G + ++I MIPG+ + Q+ +A +K LK +EA+I +MTPEER
Sbjct: 330 DFRQQLRMIQRLGPLQQIIRMIPGLSSQKMLKQLEKAIDDKKLKRIEAIINSMTPEERRN 389
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
++ S R++R+A+ SG + ++V L+ Q
Sbjct: 390 HAIINAS--RKRRIAKGSGTSVKEVDALIKQF 419
>gi|307565825|ref|ZP_07628286.1| signal recognition particle protein [Prevotella amnii CRIS 21A-A]
gi|307345449|gb|EFN90825.1| signal recognition particle protein [Prevotella amnii CRIS 21A-A]
Length = 456
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/423 (47%), Positives = 284/423 (67%), Gaps = 11/423 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V + F V +A+G+ ++ V+P Q +VK+V DEL LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKSFTDRVKAKALGMNVLTAVKPGQLMVKLVHDELALLMGGEA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ ++RP +IL++GLQG GKTT + KLA LK K K +LVA DVYRPAAIDQL +
Sbjct: 91 VGMSL-ENRPAIILMSGLQGSGKTTFAGKLAKMLKTKNHKQPLLVACDVYRPAAIDQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQV VPVY+ ++IA + EAK K DV+I+DTAGRL +D+ MM+E++ +K
Sbjct: 150 VGEQVDVPVYSEAGNKNVNEIATHAIAEAKSKGNDVIIIDTAGRLAVDEDMMNEIESLKN 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 HITPDETLFVVDSMTGQDAVNTAKEFNSRLDFDGVVLTKLDGDTRGGAALSIRTVVTKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+M+ ++ F+P+RMA RILGMGDV+S VE+AQE +E+A+ +QKKI FDF
Sbjct: 270 KFIGTGEKMDAIDVFHPERMADRILGMGDVVSLVERAQEQFDEEEAKRLQKKIQKNKFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MG++ + MIPG+GK V + + K +EA+I++MTP+ER PE
Sbjct: 330 NDFYNQIQQIKKMGNLKDLASMIPGVGKAI-RDVDIDDNAFKGIEAIIQSMTPKERTNPE 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG------SLPALSN 413
+L + +RR+R+A+ SG Q+V++L+ Q Q R MK + G G SL +SN
Sbjct: 389 IL--NNIRRRRIAKGSGTDIQEVNRLLKQFDQTRKMMKMVTGSKMAGMMSRMKSLKNMSN 446
Query: 414 LED 416
+ D
Sbjct: 447 MPD 449
>gi|42519388|ref|NP_965318.1| signal recognition particle protein [Lactobacillus johnsonii NCC
533]
gi|41583676|gb|AAS09284.1| signal recognition particle protein [Lactobacillus johnsonii NCC
533]
Length = 476
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/416 (47%), Positives = 286/416 (68%), Gaps = 11/416 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
R+IR ALLEADV+ VV+ F++ + ++A+G + + P QQ++KIV DEL K+MG E
Sbjct: 33 REIRLALLEADVNFKVVKDFIKKIKKEALGKEVQDSLNPGQQIIKIVDDELTKMMGEEAV 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
L + PT+I++ GLQG GKTT KLANYL K K+ +L+AGD+YRPAAI+QL +
Sbjct: 93 SLNKSPHIPTIIMMVGLQGTGKTTTVGKLANYLMKNEKARPLLIAGDIYRPAAIEQLKQI 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPVY+ + ++I K GLEEA K D V++DTAGRL+ID+ +MDELK V V
Sbjct: 153 GQQLDVPVYSEDNQ-DVAEIVKHGLEEADKNKNDYVLIDTAGRLEIDEQLMDELKRVTEV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P LLVVDAMTGQ A + FN ++ +TG +LTKLDGD+RGGAALS++ V+G PI
Sbjct: 212 AHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIVLTKLDGDTRGGAALSIRAVTGLPII 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M +K+ FDFN
Sbjct: 272 FTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMAEKMRENTFDFN 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++ +MTPEERE P
Sbjct: 332 DFIDQMEQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQIDHIKAIVYSMTPEERENP 390
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
++L +P RR+R+A SG++ +V++++ Q Q K +M M G + L+NL
Sbjct: 391 DIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGDMGELANL 440
>gi|51892603|ref|YP_075294.1| signal recognition particle protein [Symbiobacterium thermophilum
IAM 14863]
gi|51856292|dbj|BAD40450.1| signal recognition particle [Symbiobacterium thermophilum IAM
14863]
Length = 454
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/405 (52%), Positives = 291/405 (71%), Gaps = 9/405 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VV+ F+ V E+AVG ++ + P Q ++KIV +ELV LMGGE
Sbjct: 31 LREVRLALLEADVNFKVVKSFIARVKERAVGQEILESLNPAQMVIKIVYEELVALMGGES 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A PT+I+L GLQG GKTT +AKLA LKK+GK +LVA DVYRPAAI QL +L
Sbjct: 91 VGLNMADRPPTIIMLCGLQGAGKTTHAAKLALKLKKEGKKPLLVAADVYRPAAIKQLEVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQVGVPVY+ G + P IA+ + A ++ DV+IVDTAGRL ID+ +M+EL+ +K
Sbjct: 151 GEQVGVPVYSEGDQASPVDIAQHAVAYAAEERRDVIIVDTAGRLTIDEELMEELQQIKAR 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P + LLV+DAM GQ+A F+ ++GI G ILTKLDGD+RGGAALSV+EV+G+PIK
Sbjct: 211 IQPHDTLLVLDAMIGQDAVTTAEHFHTKLGIDGVILTKLDGDTRGGAALSVREVTGRPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+++ LEPFYPDR+A RILGMGDVL+ +EKAQE + ++ AEEM +K++ A FDF
Sbjct: 271 FVGVGEKLDALEPFYPDRLASRILGMGDVLTLIEKAQEQVDRKQAEEMARKMLKAQFDFE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTPEEREK 357
DFL+Q R + RMG + ++ M+PG+G AQ+++ EK LK +EA+I +MTP+ER
Sbjct: 331 DFLEQLRALQRMGPLQDILKMLPGVG----AQLKDINIDEKELKHIEAIILSMTPKERRN 386
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
P+++ + RR+R+A+ SG+ +V +L+ Q Q R MK L G+
Sbjct: 387 PDII--NVRRRERIARGSGRPIAEVHRLIKQFEQTRKLMKQLGGM 429
>gi|309792455|ref|ZP_07686919.1| signal recognition particle protein [Oscillochloris trichoides
DG-6]
gi|308225443|gb|EFO79207.1| signal recognition particle protein [Oscillochloris trichoides DG6]
Length = 460
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/388 (50%), Positives = 277/388 (71%), Gaps = 4/388 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M+ +R ALLEADV+ VV+ FV V+EQA+G + + + P QQ+VKIV EL+ L+G +
Sbjct: 31 MKQVRLALLEADVNFKVVKDFVAKVTEQAIGEEVTKSLTPHQQVVKIVHQELINLLGTDN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L ++ PTVI+L GLQG GKTT+SAKLA +L+K+G+ +L A D+YRPAAI QL L
Sbjct: 91 VPLQESRPGPTVIMLVGLQGTGKTTLSAKLALHLRKKGRRVLLAACDIYRPAAITQLESL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+G+ VY+ P +IA + +E AKK+ +VVIVDTAGRLQID+ +M EL+D+
Sbjct: 151 GKQLGITVYSEPNSKHPPEIATRAVELAKKELYNVVIVDTAGRLQIDEPLMKELEDIDAC 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAMTGQEA + TFN + +TG ++TK+DGD+RGGAALSV+ V+G PIK
Sbjct: 211 VQPIERLLVVDAMTGQEAVRVAETFNQRVKVTGLVMTKMDGDARGGAALSVRSVTGVPIK 270
Query: 241 LVGRGERME--DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 298
+ GE+++ LE F+PDR+A RILGMGDVLS +EKA+E+ E A+ M+K++ FD
Sbjct: 271 FISSGEKIDLNTLEAFHPDRLASRILGMGDVLSLIEKAEEMYDAEQAKRMEKRLRKGKFD 330
Query: 299 FNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
F DFL + ++G + ++IGMIPG+ ++ + +EK LK++EA+I +MT EER P
Sbjct: 331 FEDFLSAMHQMRKLGPLQQIIGMIPGLSQLARDEELVSEKQLKLIEAIIFSMTIEERRNP 390
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLV 386
EL+ S RR+R+A+ SG + Q+VSQLV
Sbjct: 391 ELIKGS--RRERIAKGSGTSVQEVSQLV 416
>gi|433446055|ref|ZP_20410186.1| signal recognition particle GTPase [Anoxybacillus flavithermus
TNO-09.006]
gi|432000800|gb|ELK21692.1| signal recognition particle GTPase [Anoxybacillus flavithermus
TNO-09.006]
Length = 446
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/391 (50%), Positives = 289/391 (73%), Gaps = 4/391 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ VSE+AVG +++ + P QQ++K+V++EL +LMGGE
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKVSERAVGQEVMKSLTPGQQVIKVVKEELTELMGGEN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVI 119
S++ A PTV+++ GLQG GKTT + KLAN L KK + +LVA D+YRPAAI QL
Sbjct: 92 SKIAVASRPPTVVMMVGLQGAGKTTTTGKLANLLRKKHNRKPLLVAADIYRPAAIKQLET 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ +PV++ G +V P +IAKQ + +AK+++ D V++DTAGRL ID+A+MDELK +K
Sbjct: 152 LGKQLDIPVFSLGDQVSPVEIAKQAIVKAKEEHYDYVLIDTAGRLHIDEALMDELKQIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
V P E+ LVVDAMTGQ+A + +FN ++G+TG ILTKLDGD+RGGAALS+K V+ PI
Sbjct: 212 VTKPDEIFLVVDAMTGQDAVNVAQSFNEQLGLTGVILTKLDGDTRGGAALSIKAVTNTPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + +E A+E+++K+ +A+F
Sbjct: 272 KFVGMGEKLDALEPFHPERMASRILGMGDVLTLIEKAQTAVDEEKAKELEQKMRTASFTL 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKP 358
+DFL+Q V ++G + ++ M+PG K+ ++ EK + +EA+I +MT EE+ P
Sbjct: 332 DDFLEQLGQVRKLGPLDELLKMLPGANKVKGLNNLQIDEKQISRVEAIIRSMTKEEKMNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
+++ S R+KR+A+ SG T Q V++L+ Q
Sbjct: 392 DIINSS--RKKRIAKGSGTTVQDVNRLLKQF 420
>gi|167630250|ref|YP_001680749.1| signal recognition particle protein [Heliobacterium modesticaldum
Ice1]
gi|167592990|gb|ABZ84738.1| signal recognition particle protein [Heliobacterium modesticaldum
Ice1]
Length = 454
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/394 (50%), Positives = 281/394 (71%), Gaps = 3/394 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALL ADVSL VV+ FV V E+AVG ++ + P QQ+VK+V +ELV LMGG
Sbjct: 31 MREVRMALLAADVSLKVVKDFVARVKERAVGQEVLESLTPGQQVVKVVYEELVALMGGTS 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L + PTV++L GLQG GKTT +KL +L+KQG+ +LVA DVYRPAA+ QL +L
Sbjct: 91 SKLTLSPKPPTVVMLVGLQGAGKTTTVSKLGLFLRKQGRRPLLVACDVYRPAAVKQLQVL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+ +PV++ GT V P IAK +E A D+V++DTAGRL I++ +M+ELK +K
Sbjct: 151 GNQLDLPVFSMGTGVSPVDIAKGAVEHAVAHGRDMVLLDTAGRLHINEELMEELKSIKSA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + +F+ ++G+ G ILTKLDGD+RGGAALSVK V+G PIK
Sbjct: 211 VRPHEILLVVDAMTGQDAVNVAESFHGQLGLDGVILTKLDGDARGGAALSVKAVTGCPIK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+ + LE F+PDRMA RILGMGDVL+ +EKAQ + + A++M++++ A F
Sbjct: 271 FAGMGEKPDALEQFHPDRMASRILGMGDVLTLIEKAQASIDAQVAKDMEQRLRKAEFTLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL Q + + +MG + +++GM+PGM K+ + V+ +K +K +EA+I +MTPEER P+
Sbjct: 331 DFLVQIQQMKKMGPLDQLMGMMPGMNKMKALKGVQIDDKDMKHVEAIILSMTPEERRNPQ 390
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
+L +S R++R+A+ SG + QQV+ L+ Q R
Sbjct: 391 ILKDS--RKRRIARGSGTSVQQVNNLLKTFEQTR 422
>gi|344201963|ref|YP_004787106.1| signal recognition particle protein [Muricauda ruestringensis DSM
13258]
gi|343953885|gb|AEM69684.1| signal recognition particle protein [Muricauda ruestringensis DSM
13258]
Length = 442
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/390 (50%), Positives = 270/390 (69%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL+ADV+ + + F V E+A+G ++ ++P Q +VK+V+DEL +LMGGE
Sbjct: 31 LKEVRRALLDADVNFKIAKEFTNTVKEKAMGQNVLTSLQPGQLMVKLVKDELTELMGGE- 89
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+E + P+VIL++GLQG GKTT S KLANYLK K+ K +LVA DVYRPAAIDQL +
Sbjct: 90 AEGIDLSGDPSVILMSGLQGSGKTTFSGKLANYLKNKKTKKPLLVACDVYRPAAIDQLHV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+GV VY+ P IAK G+ AK K +VVI+DTAGRL +D+ MM E+ ++ +
Sbjct: 150 VGDQIGVEVYSDRENNDPVAIAKAGIAHAKSKGCNVVIIDTAGRLAVDEQMMTEISNIHK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVD+MTGQ+A TFN + G ILTKLDGD+RGGAA+S+K V KPI
Sbjct: 210 AIKPQETLFVVDSMTGQDAVNTAKTFNDVLNFDGVILTKLDGDTRGGAAISIKSVVDKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ F+P RMA RILGMGDV+S VE+AQE +E A ++QKKI F F
Sbjct: 270 KFIGTGEKMEAIDVFHPSRMADRILGMGDVVSLVERAQEQFDEEQARKIQKKIAKNKFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFL Q + + +MG+M ++GMIPG GK + + + K +EA+I +MTPEER P
Sbjct: 330 DDFLSQIQQIKKMGNMKDLMGMIPGAGKALKG-LDIDDDAFKHIEAIIHSMTPEERSTPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
L S R+KR+A SG + Q+V+QL+ Q
Sbjct: 389 KLNAS--RKKRIAAGSGTSIQEVNQLLKQF 416
>gi|300361928|ref|ZP_07058105.1| signal recognition particle protein [Lactobacillus gasseri JV-V03]
gi|300354547|gb|EFJ70418.1| signal recognition particle protein [Lactobacillus gasseri JV-V03]
Length = 476
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/416 (47%), Positives = 285/416 (68%), Gaps = 11/416 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
R+IR ALLEADV+ VV+ F++ + ++A+G + + P QQ++KIV DEL K+MG E
Sbjct: 33 REIRLALLEADVNFKVVKDFIKKIKKEALGKEVQESLNPGQQIIKIVDDELTKMMGEEAV 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVIL 120
L ++ PT+I++ GLQG GKTT KLANYL K K+ +L+AGD+YRPAAIDQL +
Sbjct: 93 SLNKSQHIPTIIMMVGLQGTGKTTTVGKLANYLMKNEKARPLLIAGDIYRPAAIDQLKQI 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPVY+ + ++I GLEEA K D V++DTAGRL+ID+ +M+ELK V V
Sbjct: 153 GQQLNVPVYSEDNQ-DVAEIVNHGLEEADKNKNDYVLIDTAGRLEIDEQLMNELKRVTAV 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P LLVVDAMTGQ A + FN ++ +TG ILTKLDGD+RGGAALS++ V+G PI
Sbjct: 212 AHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIILTKLDGDTRGGAALSIRAVTGLPII 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G+GE++ DL F+PDRMA RILGMGD+L+ +EKAQ+ ++AE+M +K+ FDFN
Sbjct: 272 FTGQGEKLTDLSTFHPDRMASRILGMGDMLTLIEKAQQDYDAKEAEKMAEKMRENTFDFN 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREKP 358
DF+ Q V +MG + ++I MIPG+G PA ++ EK + ++A++ +MTPEERE P
Sbjct: 332 DFIDQMDQVQKMGPLDQIIKMIPGLGN-NPALKNIQIPEKQISHIKAIVYSMTPEERENP 390
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
++L +P RR+R+A SG++ +V++++ Q Q K +M M G + +NL
Sbjct: 391 DIL--NPSRRRRIAAGSGRSIAEVNRMIKQFKQ----SKEMMQKMTKGDMGEFANL 440
>gi|156741648|ref|YP_001431777.1| signal recognition particle protein [Roseiflexus castenholzii DSM
13941]
gi|156232976|gb|ABU57759.1| signal recognition particle protein [Roseiflexus castenholzii DSM
13941]
Length = 444
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/411 (48%), Positives = 288/411 (70%), Gaps = 7/411 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M+ +R ALLEADV+L VVR FV V+E+AVG + + + P QQ++KIV EL+ L+G
Sbjct: 31 MKQVRIALLEADVNLKVVREFVARVTEKAVGEEVTKSLTPAQQVIKIVHQELIDLLGQAN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
L A+ PT+I+L GLQG GKTT +AKLA +L+K+GK +LVA D+YRPAAI QL L
Sbjct: 91 VPLAEARPGPTIIMLIGLQGSGKTTTAAKLALWLRKKGKRPLLVAADIYRPAAITQLESL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Q+G+PV++ G + +P IA+ + A+ +++ VI+DTAGRLQID+ +M EL+ +
Sbjct: 151 GRQLGIPVHSEGAQSRPPDIARNAVRRARDESITHVIIDTAGRLQIDEPLMVELEQINAA 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E LLVVDAM GQEA + FN +G+TG I TK+DGD+RGGAALSV+ V+G PIK
Sbjct: 211 VEPVERLLVVDAMIGQEAVRVAEEFNRRVGLTGIIFTKIDGDARGGAALSVRAVTGVPIK 270
Query: 241 LVGRGERME--DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFD 298
+G GE++E +EPF+PDR+A RILGMGDVLS +E+A+ + +E A +MQKK++ +FD
Sbjct: 271 FLGSGEKVEASTIEPFHPDRLASRILGMGDVLSLIERAEAIYDEEQARKMQKKLVKGSFD 330
Query: 299 FNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
F DFL + + ++G + +++GMIPG+ K+ ++ EK LK +EA+I +MT EER P
Sbjct: 331 FEDFLASMQQMRKLGPLQQILGMIPGLDKLAREEII-TEKDLKKIEAIIFSMTKEERRNP 389
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLP 409
+L+ R++R+A+ SG Q+V+QLV Q QM+ MK + G +GG P
Sbjct: 390 DLIKGR--RKERIARGSGTQVQEVTQLVNQFRQMQRMMKRMGG--KGGIDP 436
>gi|298207766|ref|YP_003715945.1| signal recognition particle protein [Croceibacter atlanticus
HTCC2559]
gi|83850404|gb|EAP88272.1| signal recognition particle protein [Croceibacter atlanticus
HTCC2559]
Length = 442
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/390 (49%), Positives = 275/390 (70%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRAL++ADV+ + + F V E+A+G G+++ ++P Q +VK+V+DEL +LMGGEV
Sbjct: 31 LKEVRRALVDADVNYKIAKEFTSTVKEKALGQGVLKDLKPGQLMVKLVKDELTELMGGEV 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
E + P++IL++GLQG GKTT S KLAN+LK K+ K +LVA D+YRPAAI+QL +
Sbjct: 91 -EGINLSGNPSIILMSGLQGSGKTTFSGKLANFLKNKKTKKPLLVACDIYRPAAINQLHV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+GV V++ P I+K + AK+ +VVI+DTAGRL +D+AMM E+ ++ +
Sbjct: 150 VGEQIGVEVFSDEGNQDPVAISKAAIAHAKQNGHNVVIIDTAGRLAVDEAMMTEISNIHK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+S+K V KPI
Sbjct: 210 AIQPQETLFVVDSMTGQDAVNTAKAFNDTLNFDGVILTKLDGDTRGGAAISIKSVVDKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++QKKI F F
Sbjct: 270 KFIGTGEKMDAIDVFYPSRMADRILGMGDVVSLVERAQEQYDEEEARKLQKKIAKNQFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFLKQ + V +MGSM ++GMIPG GK + + + K +EA+I +MTPEER P
Sbjct: 330 DDFLKQIQQVKKMGSMKDLMGMIPGAGK-MMKDIDIDDDAFKGIEAIIHSMTPEERSNPS 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
++ S R+KRVA+ SG + Q+V+QL+ Q
Sbjct: 389 IINSS--RKKRVAKGSGTSVQEVNQLLKQF 416
>gi|379722928|ref|YP_005315059.1| hypothetical protein PM3016_5192 [Paenibacillus mucilaginosus 3016]
gi|378571600|gb|AFC31910.1| Ffh [Paenibacillus mucilaginosus 3016]
Length = 470
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/404 (47%), Positives = 280/404 (69%), Gaps = 3/404 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VV+ F+ V E+A+G +++ P +V IV EL +LMGG
Sbjct: 33 LREVRLALLEADVNFKVVKEFIAKVKERAIGQEVLQSFTPAMVVVDIVNKELTELMGGSQ 92
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L A PTVI++AGLQG GKTT + KLA L +Q ++ A D+YRPAAI QL ++
Sbjct: 93 SKLARANKPPTVIMMAGLQGAGKTTSTGKLAKMLLQQNHRPLVAAADIYRPAAIKQLQVI 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV++ G +V P +IAKQ L+ AK N D +I+DTAGRL ID+ +M+ELK +
Sbjct: 153 GEQLKVPVFSLGDQVSPVEIAKQALQHAKDHNNDYLIIDTAGRLHIDENLMEELKQIVEA 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + F+ ++ +TG +LTKLDGD+RGGAA+SVK V+G PIK
Sbjct: 213 VTPHEILLVVDAMTGQDAVNVAENFHKQLPLTGVVLTKLDGDTRGGAAISVKAVTGCPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+M+ LEPF+P+RMA RILGMGD+L+ +EKAQ + + A+EM++K+ +A F F+
Sbjct: 273 FAATGEKMDALEPFHPERMASRILGMGDMLTLIEKAQAGIDADKAKEMERKLRTAEFTFD 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL Q V ++G + +++ M+PG GK+ + ++ ++ ++ + A++++MT EER P+
Sbjct: 333 DFLDQMEQVKKLGPLDQILDMLPGAGKMKGMKDLKVDDRQMQRIAAIVKSMTKEERANPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 403
LL SP RRKR+A SG + Q V++ + Q MR MK +M
Sbjct: 393 LL--SPSRRKRLAAGSGNSVQDVNRFIKQFDDMRKMMKQFSSMM 434
>gi|120603184|ref|YP_967584.1| signal recognition particle protein [Desulfovibrio vulgaris DP4]
gi|120563413|gb|ABM29157.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfovibrio vulgaris DP4]
Length = 508
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/413 (47%), Positives = 285/413 (69%), Gaps = 6/413 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VV+ F+ V E+ +G +++ + P QQ+VK+V DELV+L+GG
Sbjct: 31 LREVRLALLEADVNFKVVKDFIDRVKERCLGQDVLKSLTPAQQVVKVVHDELVELLGGGT 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
+EL ++P VI++ GLQG GKTT SAK+AN L+K+ LV DVYRPAAIDQLV L
Sbjct: 91 TELDLRGAQPGVIMMVGLQGSGKTTSSAKIANLLRKRKMRPYLVPVDVYRPAAIDQLVTL 150
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
Q+ +P Y + ++KP I + L +AK+K V++DTAGRL +D+A+MDEL +K
Sbjct: 151 ARQLDIPYYQSTPDMKPLDIVRAALADAKEKQCTAVLLDTAGRLHVDEALMDELAALKAT 210
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+P E+L V DAMTGQ+A + FN ++GITG +LTK+DGD+RGGAALS+K V+G +K
Sbjct: 211 FSPQEILFVADAMTGQDAVTVADAFNEKLGITGVVLTKMDGDARGGAALSIKSVTGASVK 270
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE++ D+E F+PDR+AGRILGMGD+L+ +EKAQ ++ ++AE + KK A+FD
Sbjct: 271 YVGIGEKLSDIEVFHPDRVAGRILGMGDMLTLIEKAQSTIEADEAEALTKKFQRASFDLE 330
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF Q R + ++GS+ ++ MIPGMG + Q+ EK + +EA+I +MT +ER P
Sbjct: 331 DFRTQMRRMKKLGSLEGILKMIPGMGALRDKLGQMSVPEKDMARIEAIISSMTMKERRNP 390
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVME--GGSLP 409
+++ S RR R+A+ SG T Q+V+QL+ QMR MK +M + + GG +P
Sbjct: 391 DVINGS--RRARIAKGSGTTVQEVNQLLRNFEQMREMMKRVMNMGKPGGGRMP 441
>gi|337750082|ref|YP_004644244.1| hypothetical protein KNP414_05850 [Paenibacillus mucilaginosus
KNP414]
gi|386725707|ref|YP_006192033.1| hypothetical protein B2K_26860 [Paenibacillus mucilaginosus K02]
gi|336301271|gb|AEI44374.1| Ffh [Paenibacillus mucilaginosus KNP414]
gi|384092832|gb|AFH64268.1| Ffh [Paenibacillus mucilaginosus K02]
Length = 457
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/404 (47%), Positives = 280/404 (69%), Gaps = 3/404 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R++R ALLEADV+ VV+ F+ V E+A+G +++ P +V IV EL +LMGG
Sbjct: 33 LREVRLALLEADVNFKVVKEFIAKVKERAIGQEVLQSFTPAMVVVDIVNKELTELMGGSQ 92
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L A PTVI++AGLQG GKTT + KLA L +Q ++ A D+YRPAAI QL ++
Sbjct: 93 SKLARANKPPTVIMMAGLQGAGKTTSTGKLAKMLLQQNHRPLVAAADIYRPAAIKQLQVI 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
GEQ+ VPV++ G +V P +IAKQ L+ AK N D +I+DTAGRL ID+ +M+ELK +
Sbjct: 153 GEQLKVPVFSLGDQVSPVEIAKQALQHAKDHNNDYLIIDTAGRLHIDENLMEELKQIVEA 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E+LLVVDAMTGQ+A + F+ ++ +TG +LTKLDGD+RGGAA+SVK V+G PIK
Sbjct: 213 VTPHEILLVVDAMTGQDAVNVAENFHKQLPLTGVVLTKLDGDTRGGAAISVKAVTGCPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE+M+ LEPF+P+RMA RILGMGD+L+ +EKAQ + + A+EM++K+ +A F F+
Sbjct: 273 FAATGEKMDALEPFHPERMASRILGMGDMLTLIEKAQAGIDADKAKEMERKLRTAEFTFD 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL Q V ++G + +++ M+PG GK+ + ++ ++ ++ + A++++MT EER P+
Sbjct: 333 DFLDQMEQVKKLGPLDQILDMLPGAGKMKGMKDLKVDDRQMQRIAAIVKSMTKEERANPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVM 403
LL SP RRKR+A SG + Q V++ + Q MR MK +M
Sbjct: 393 LL--SPSRRKRLAAGSGNSVQDVNRFIKQFDDMRKMMKQFSSMM 434
>gi|333031351|ref|ZP_08459412.1| signal recognition particle protein [Bacteroides coprosuis DSM
18011]
gi|332741948|gb|EGJ72430.1| signal recognition particle protein [Bacteroides coprosuis DSM
18011]
Length = 441
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/402 (49%), Positives = 278/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++D+RRALL+ADV+ V ++F V E+A+G ++ V+P Q +VKIV DEL +LMGGE
Sbjct: 31 LKDVRRALLDADVNYKVAKKFTDTVKEKALGQDVLTAVKPSQLMVKIVHDELTQLMGGET 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGK-SCMLVAGDVYRPAAIDQLVI 119
++ + +P VIL++GLQG GKTT S KLA LK + S +LVA DVYRPAAIDQL +
Sbjct: 91 ADFD-VQGKPAVILMSGLQGSGKTTFSGKLAKLLKTKKHKSPLLVACDVYRPAAIDQLKV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+ VPVY P +IA+ ++EAK K D+VI+DTAGRL ID+ MM+E++ +K+
Sbjct: 150 LGEQINVPVYAEPDSKDPVKIAQNAIQEAKAKGNDIVIIDTAGRLAIDEQMMNEIESIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP EVL VVD+MTGQ+A FN + G +LTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AINPNEVLFVVDSMTGQDAVNTAKEFNERLNFDGVVLTKLDGDTRGGAALSIRTVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE++E ++ F+P RMA RILGMGD++S VE+AQE +++A+++QKKI FDF
Sbjct: 270 KFVGTGEKLEAIDQFHPSRMADRILGMGDIVSLVERAQEQYDEDEAKKLQKKIQKNQFDF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + +MG++ + MIPG+GK + + + K +EA+I +MTP ER P
Sbjct: 330 NDFLSQIHQIKKMGNLKELAAMIPGVGKAI-KDIDIDDNAFKSIEAIIFSMTPAERTDPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
L+ + RRKR+A SG T Q+V++L+ Q Q R MK + G
Sbjct: 389 LI--NGTRRKRIADGSGTTIQEVNRLLKQFDQTRKMMKMVTG 428
>gi|402310924|ref|ZP_10829882.1| signal recognition particle protein [Eubacterium sp. AS15]
gi|400366612|gb|EJP19639.1| signal recognition particle protein [Eubacterium sp. AS15]
Length = 443
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/409 (48%), Positives = 282/409 (68%), Gaps = 9/409 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
M+ ++ ALLEADV+ VV+ FV V E++VG +++ + P QQ++KIV DEL +LMG
Sbjct: 32 MKQVKLALLEADVNYKVVKDFVAKVKERSVGEEVMKSLTPGQQVIKIVNDELKELMGSVQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ + PTVIL++GLQG GKTT + KLA +LK QGK+ MLVA DVYRPAAI QL IL
Sbjct: 92 SKINISSKPPTVILMSGLQGAGKTTTTGKLAYHLKSQGKNPMLVACDVYRPAAITQLQIL 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
++VG Y+ P IA+ +E AK DVVI+DTAGRL ID+ +M ELK++K
Sbjct: 152 SDKVGAKFYSEEGNKNPVTIAQNAVESAKTLGFDVVIIDTAGRLHIDEELMQELKNIKST 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P+E+LLVVDAMTGQ+ +V +F+ +GI G IL+KLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VRPSEILLVVDAMTGQDTVNIVKSFDEALGIDGVILSKLDGDTRGGAALSIRAVTNKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE++ DLEPFYPDR+A RILGMGDV+S +EKAQ + ++ +E++ KI + +F+F
Sbjct: 272 FAAIGEKINDLEPFYPDRIASRILGMGDVMSLIEKAQSAVDEQSMKELEDKIRNRDFNFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA---EKSLKIMEAMIEAMTPEEREK 357
DFLKQ + + +MG + +I MIPG+ P Q++ A +K L +EA+I++MT +ER +
Sbjct: 332 DFLKQMQQIKKMGPLKNIIEMIPGV----PKQLKNADIDDKELLKIEAIIQSMTKQERLE 387
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
P ++ S R+ R+A+ SG QV++L+ Q + R MK + + G
Sbjct: 388 PSIINGS--RKIRIAKGSGTQVSQVNKLLKQFEETRKMMKQMTNIKMSG 434
>gi|357237084|ref|ZP_09124427.1| putative signal recognition particle protein [Streptococcus criceti
HS-6]
gi|356885066|gb|EHI75266.1| putative signal recognition particle protein [Streptococcus criceti
HS-6]
Length = 524
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/406 (46%), Positives = 286/406 (70%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKDFIKRVRERAVGHEIIDTLDPTQQIIKIVNEELTAILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
E+ + PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 EIEKSPKIPTIIMIIGLQGAGKTTFAGKLANKLVKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+V ++I K GL +A++ + D V++DTAGRLQID+ +M EL+DVK +
Sbjct: 153 GQQISVPVFDMGTDVPATEIVKSGLAQARENHNDYVLIDTAGRLQIDETLMQELRDVKDL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV++++G+PIK
Sbjct: 213 AQPNEILLVVDSMIGQEAANVAREFNQKLDITGVVLTKIDGDTRGGAALSVRQITGRPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKRSAEIAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF++Q + MG M ++ M+PGM G + ++ E+++ A++ +MTPEERE P+
Sbjct: 333 DFIEQLDQMQSMGPMEDLLKMLPGMAGNPALSNLKVDERAIARKRAIVSSMTPEERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + V++ + Q + M+ GVM G
Sbjct: 393 LL--NPSRRRRIAAGSGNSFVDVNKFIKDFNQAKSMMQ---GVMSG 433
>gi|332638237|ref|ZP_08417100.1| signal recognition particle protein [Weissella cibaria KACC 11862]
Length = 488
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/396 (50%), Positives = 270/396 (68%), Gaps = 6/396 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A G ++ G+ P QQ+V IV DEL +MG
Sbjct: 32 MREIRLALLEADVNFTVVKDFVRNVREKAAGAKVLEGLNPAQQIVSIVNDELTAMMGESE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L + PTVI++ GLQG GKTT + KLA LK +Q +++A DVYRPAAIDQL
Sbjct: 92 VPLNVSDKIPTVIMMVGLQGAGKTTTAGKLALKLKSEQNARPLMIAADVYRPAAIDQLKT 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+ VPV+ GT+ P I +QGL +A + D V +D AGRLQID+A+M EL DVK
Sbjct: 152 LGEQIDVPVFEMGTDADPRDIVRQGLAKAAELKSDYVFIDAAGRLQIDEALMQELADVKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LLVVDAMTGQ A FN + +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 IAQPDEILLVVDAMTGQNAVETAEGFNERLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+M DL+ FYPDRMA RILGMGD+L+ +EKAQ+ ++ A E +K+ S FDF
Sbjct: 272 KFVGQGEKMTDLDIFYPDRMASRILGMGDLLTLIEKAQKDFDEKQAAETMEKMKSNTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q V MG + ++ MIPGM P A V+ K + ++A++ +MTP ERE
Sbjct: 332 NDFIDQMDQVQNMGPIEDLLKMIPGMAN-NPALANVKVDPKDMAHLKAIVMSMTPAEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMR 393
P+LL +P RR+R+A +G+ +V++++ Q +M+
Sbjct: 391 PDLL--NPSRRRRLAAGAGRPIVEVNRMIKQFNEMK 424
>gi|225868530|ref|YP_002744478.1| signal recognition particle protein [Streptococcus equi subsp.
zooepidemicus]
gi|225701806|emb|CAW99232.1| signal recognition particle protein [Streptococcus equi subsp.
zooepidemicus]
Length = 523
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/407 (47%), Positives = 281/407 (69%), Gaps = 9/407 (2%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ + E+AVG +I + P QQ++KIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKRIRERAVGHEIIDTLDPTQQILKIVNEELTGILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
EL + PTVI++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 ELDKSPKIPTVIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT I GL +AK+ D V++DTAGRLQID+ +M EL++VK +
Sbjct: 153 GQQINVPVFDMGTNHSAVDIVANGLAQAKENRHDYVLIDTAGRLQIDEKLMSELREVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
P E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALS++E++GKPIK
Sbjct: 213 AKPNEILLVVDSMIGQEAANVAYEFNNQLDITGVVLTKIDGDTRGGAALSIREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREKP 358
DF++Q V MG M ++ MIPGM P A ++ +K + A++ +MTPEERE+P
Sbjct: 333 DFIEQLDQVQNMGPMEDLLKMIPGMA-TNPALANIKVDDKQIARKRAIVSSMTPEERERP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
ELL +P RR+R+A SG + +V++ + Q + M+ GVM G
Sbjct: 392 ELL--TPSRRRRIAAGSGNSFVEVNKFIKDFNQAKAMMQ---GVMSG 433
>gi|317495250|ref|ZP_07953620.1| signal recognition particle protein [Gemella morbillorum M424]
gi|316914672|gb|EFV36148.1| signal recognition particle protein [Gemella morbillorum M424]
Length = 450
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/409 (49%), Positives = 287/409 (70%), Gaps = 7/409 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV+ FV+ +SE+AVG +++ + P QQ+VKIV +ELV+L+GG
Sbjct: 32 MREVRLALLEADVNFKVVKDFVKKISERAVGTEVMKSLTPAQQIVKIVNEELVELLGGTN 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLA-NYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
EL + T ++ GLQG GKTT + KLA K K +L+A DVYRPAA+ QL
Sbjct: 92 VELN-QGGKITTTMMVGLQGAGKTTTAGKLALKVKKTMKKKPLLIAADVYRPAAVQQLKT 150
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ + V+ + P I K+GLE A++ + VI+DTAGRL ID+ +MDELKD+K
Sbjct: 151 LGKQLDIEVFYVDKD--PVDIVKEGLEFAREHYYNYVIIDTAGRLHIDELLMDELKDIKS 208
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+NP E+LLVVDAM GQEA + T+F+ ++ ITG +LTKLDGD+RGGAALS+K ++GKPI
Sbjct: 209 AVNPDEILLVVDAMIGQEAVNIATSFDEQLDITGLVLTKLDGDTRGGAALSIKSITGKPI 268
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
KLVG GE+M DLE F+P+RMA RILGMGDVL+ +EKAQ + +++A++MQ+K+++ +F F
Sbjct: 269 KLVGMGEKMNDLELFHPERMASRILGMGDVLTLIEKAQANIDEDEAKKMQEKLLNQSFTF 328
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA-EKSLKIMEAMIEAMTPEEREKP 358
DFL Q V ++GS ++GMIPGMGK+ + EK +EA+I++MT EER+ P
Sbjct: 329 EDFLSQLEQVKKLGSFKDILGMIPGMGKMKNMNLDAVDEKQFVYVEAIIKSMTIEERQNP 388
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGS 407
+++ + RRKR+A SG+ +V +L+ Q +MR MK G+M S
Sbjct: 389 DII--NVPRRKRIAAGSGRPISEVHKLIKQFEEMRKMMKQFGGLMNDKS 435
>gi|406599569|ref|YP_006744915.1| signal recognition particle protein [Leuconostoc gelidum JB7]
gi|406371104|gb|AFS40029.1| signal recognition particle protein [Leuconostoc gelidum JB7]
Length = 489
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/409 (49%), Positives = 270/409 (66%), Gaps = 6/409 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ V++FV V E+A G ++ G+ P QQ+VKIV DEL MG E
Sbjct: 32 MREIRLALLEADVNYDTVKKFVANVREKASGADILEGLNPAQQVVKIVNDELTITMGEEA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PT+I++AGLQG GKTT AKLA LKK+ + +L+A DVYRPAAIDQL I
Sbjct: 92 VPLNKSPKIPTIIMMAGLQGAGKTTTVAKLAYKLKKEENARPLLIAADVYRPAAIDQLEI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG + +PV+ GT V P +I +QGL +A + D V +DTAGRLQID +M ELKDV
Sbjct: 152 LGRDLEIPVFQLGTAVNPREIVRQGLAKAAENKNDYVFIDTAGRLQIDDVLMQELKDVAE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E+LL VDAMTGQ AA F+ + +TG +LTKLDGD+RGGAALS+++V+GKPI
Sbjct: 212 IAQPDEILLTVDAMTGQNAAETAKGFSAALDLTGVVLTKLDGDTRGGAALSIRDVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+ DL+ FYPDRMA RILGMGDVL+ +EKAQ +E + +K+ FDF
Sbjct: 272 KFVGQGEKPTDLDVFYPDRMASRILGMGDVLTLIEKAQRDFDEEAQAKQLEKMRQNTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITP--AQVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q + V MG M ++ MIPGM P A V K +EA++ +MTP ERE
Sbjct: 332 NDFVAQLKQVQSMGPMEDLLKMIPGMAN-NPALANVNIDAKQFSHLEAIVNSMTPAERED 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGG 406
P+L+ +P RR+R+A +G+ +V++++ Q QMR M GG
Sbjct: 391 PDLI--NPSRRRRLASGAGRPIVEVNRMIKQFDQMRKMMNQATNGNFGG 437
>gi|188588867|ref|YP_001920590.1| signal recognition particle protein [Clostridium botulinum E3 str.
Alaska E43]
gi|251780688|ref|ZP_04823608.1| signal recognition particle protein [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|188499148|gb|ACD52284.1| signal recognition particle protein [Clostridium botulinum E3 str.
Alaska E43]
gi|243085003|gb|EES50893.1| signal recognition particle protein [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 452
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 279/391 (71%), Gaps = 5/391 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ F+ VS + VG ++ + P QQ++KIV +EL LMGG
Sbjct: 32 MREVKLALLEADVNYKVVKGFISTVSSKCVGNEVLESLTPGQQVIKIVNEELTNLMGGSE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ ++ S TVI+L GLQG GKTT+ KLA L+K K +LVA DVYRPAAI QL I+
Sbjct: 92 SKINYSSSGTTVIMLVGLQGAGKTTMCGKLALELRKNNKKPLLVACDVYRPAAIKQLEIV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV++ G +V P IAK G+ K +++I+DTAGRL ID+A+M EL+D+K
Sbjct: 152 GKQIEIPVFSMGDKVNPVDIAKAGIAHGKDNGNNIIIIDTAGRLHIDEALMQELQDIKEN 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP+E+LLVVD+MTGQ+A + +FN ++ +TG ILTKLDGD+RGGAALS++ ++ KPIK
Sbjct: 212 VNPSEILLVVDSMTGQDAVNVAESFNNDLDVTGVILTKLDGDTRGGAALSIRNITEKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE++ D E F+PDRM+ RILGMGDVLS +EKAQ + +++A ++ K++++ F+FN
Sbjct: 272 YIGTGEKLSDFEVFHPDRMSSRILGMGDVLSLIEKAQSAIDEKEAADLGKRMLNQEFNFN 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
D+L + ++G +++++ MIPGM ++ + + E ++ +++I++MT +ER P
Sbjct: 332 DYLTAIEQMKKLGPLNKILEMIPGMNSKELQNVDLSKGEDAINKTKSVIQSMTEKERNNP 391
Query: 359 ELLAE---SPVRRKRVAQDSGKTEQQVSQLV 386
LL + R+KR+A+ +G T Q+V++LV
Sbjct: 392 HLLTSGNTASSRKKRIARGAGTTIQEVNKLV 422
>gi|255505348|ref|ZP_05345603.3| signal recognition particle protein [Bryantella formatexigens DSM
14469]
gi|255268496|gb|EET61701.1| signal recognition particle protein [Marvinbryantia formatexigens
DSM 14469]
Length = 451
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/408 (49%), Positives = 282/408 (69%), Gaps = 11/408 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+++++ ALLEADVS VV++F+++V E+AVG ++ G+ P Q ++KIV +ELV LMG E
Sbjct: 34 LKEVKMALLEADVSFKVVKQFMKSVQERAVGADVMTGLNPGQMVIKIVNEELVALMGSET 93
Query: 61 SELVFAKSRP----TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQ 116
+E+ RP TVI++ GLQG GKTT +AKLA LK +G+ +L A DVYRPAAI Q
Sbjct: 94 TEIAL---RPAGEITVIMMVGLQGAGKTTTTAKLAGKLKSKGRVPLLAACDVYRPAAIQQ 150
Query: 117 LVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKD 176
L I GE+ G+ V++ G + P IA+ +E AK +N++VVI+DTAGRL +D+ MMDEL
Sbjct: 151 LQINGEKQGIEVFSMGDKQSPVNIARAAVEHAKSRNMNVVILDTAGRLHVDEEMMDELVQ 210
Query: 177 VKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSG 236
+K ++ + +LVVDAMTGQ+A + FN +IGI G ILTKLDGDSRGGAALS++ G
Sbjct: 211 IKEAVHVDQTILVVDAMTGQDAVNVSEMFNEKIGIDGVILTKLDGDSRGGAALSIRATCG 270
Query: 237 KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN 296
KPI VG GE++ DLE FYPDRMA RILGMGDV+S +EKAQ + + A+E+++KI A
Sbjct: 271 KPILYVGMGEKLSDLEQFYPDRMASRILGMGDVMSLIEKAQATLDENKAKELEQKIKKAK 330
Query: 297 FDFNDFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEE 354
F F+D+L+ + MG +S ++ M+PGMG K+ + EK+L EA+I +MTPEE
Sbjct: 331 FGFDDYLESMNQMKNMGGLSGILSMMPGMGGSKMKNLEGMIDEKALARNEAIILSMTPEE 390
Query: 355 REKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV 402
R P++L +P R+KR+A G +V++LV Q Q R MK + G+
Sbjct: 391 RANPDIL--NPSRKKRIAAGCGVDIAEVNRLVKQFEQTRKMMKQIPGM 436
>gi|310658884|ref|YP_003936605.1| Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
[[Clostridium] sticklandii]
gi|308825662|emb|CBH21700.1| Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
[[Clostridium] sticklandii]
Length = 448
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/400 (48%), Positives = 276/400 (69%), Gaps = 3/400 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV VV+ F++ V E+++G ++ + P QQ++KIV +EL +LMGG
Sbjct: 32 MREVKLALLEADVHYKVVKDFIKKVKERSIGSEVMESLTPGQQVIKIVNEELSELMGGVQ 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ + PTVI+L GLQG GKT+ + KLA LKKQGK MLVA DVYRPAAI QL I+
Sbjct: 92 SKINISSKPPTVIMLVGLQGAGKTSTAGKLALNLKKQGKQPMLVACDVYRPAAIKQLEIV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G Y+ P +IA +G E+AK D+VI+DTAGRL ID+ +MDELK++K
Sbjct: 152 ASGAGAIFYSEEGNTNPVEIATKGYEKAKTLGYDIVIIDTAGRLHIDENLMDELKNIKSS 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P E++LVVD+MTGQ+A + +F+ +GI G ILTKLDGD+RGGAALS+K ++ KPIK
Sbjct: 212 IKPHEIMLVVDSMTGQDAVNIAESFDQTLGIDGVILTKLDGDTRGGAALSIKAITKKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
GE++EDLE FYPDRMA RILGMGDV+S +EKAQ ++ A+EMQ K+ SA+F F+
Sbjct: 272 YAAVGEKLEDLEQFYPDRMASRILGMGDVMSLIEKAQSAFDEDKAKEMQAKMKSADFTFD 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPE 359
DFL Q + + +MG + ++ MIPGM ++ + V +K L +EA+I++MT +ER+ P
Sbjct: 332 DFLDQMQQIKKMGPLKNLLEMIPGMSQMKQLKDVDIDDKELVKIEAIIQSMTKKERQNPS 391
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
++ S R+KR+A SG QV++L+ Q + + MK
Sbjct: 392 IINAS--RKKRIAMGSGTHVSQVNRLLKQFEESKKMMKQF 429
>gi|407474079|ref|YP_006788479.1| signal recognition particle protein Ffh [Clostridium acidurici 9a]
gi|407050587|gb|AFS78632.1| signal recognition particle protein Ffh [Clostridium acidurici 9a]
Length = 447
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/399 (49%), Positives = 278/399 (69%), Gaps = 2/399 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR++R ALLEADV+ VV++F+ +V E++VG ++ + P QQ++KIV +EL LMG
Sbjct: 32 MREVRLALLEADVNFRVVKKFISSVKERSVGHEVMESLTPGQQVIKIVNEELKSLMGETE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ FA S PTVI++ GLQG GKTT S KL LK +GK +LVA D+YRPAAI QL ++
Sbjct: 92 SKINFASSPPTVIMMCGLQGAGKTTTSGKLGGLLKGKGKRPLLVACDIYRPAAIKQLEVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G ++ +PV++ G + P IAK +E KK D++IVDTAGRL ID+ +MDEL+++K
Sbjct: 152 GSKLDIPVFSMGDKENPVNIAKAAIEHGKKNGNDLIIVDTAGRLHIDEELMDELQNIKAE 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+NP E+LLVVD+MTGQ+A + TFN + ITG +LTKLDGD+RGGAALS++ V+ KPIK
Sbjct: 212 VNPNEILLVVDSMTGQDAVTVAETFNETLDITGVVLTKLDGDARGGAALSIRAVTEKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
+G GE+++DLE F+PDRMA RILGMGDVLS +EKAQ E A E++KK+ + F F
Sbjct: 272 FIGMGEKLDDLETFHPDRMASRILGMGDVLSLIEKAQANFDTEKALELEKKLRNQEFTFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPEL 360
DFL Q + V +G M+ ++GM+PG+ + EK K +EA+I++MT EER P +
Sbjct: 332 DFLDQLQQVKNLGPMNELLGMLPGVNSKQLKGLNVDEKDFKRLEAIIQSMTKEERINPTV 391
Query: 361 LAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNL 399
+ S RRKR+AQ SG Q V++L+ Q + R +K
Sbjct: 392 IDGS--RRKRIAQGSGTNIQDVNKLLKQFKETRKMIKKF 428
>gi|219117644|ref|XP_002179613.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408666|gb|EEC48599.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 448
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/418 (49%), Positives = 286/418 (68%), Gaps = 23/418 (5%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGE- 59
+R++RRALL+ADV++ V ++ V +++G ++ GV +QQ VK + DEL+ +MGG+
Sbjct: 10 LREVRRALLDADVNVDVADTLIEGVRARSLGQEVLEGVTAEQQFVKAMYDELLDMMGGDS 69
Query: 60 ------------VSELVFAKSR-PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAG 106
V+ L + P VILLAGLQG GKTT + KLA +LK+Q K +LVA
Sbjct: 70 SVPMSDGPSNVPVATLASGTAADPAVILLAGLQGAGKTTAAGKLALFLKEQRK-VLLVAA 128
Query: 107 DVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQI 166
D+YRPAAI QL +LGE +GV V+T GT+V P +I G+++A+ + D VIVDTAGR I
Sbjct: 129 DIYRPAAIKQLQVLGESIGVEVFTKGTDVDPVEIVNAGIQKARDEGYDTVIVDTAGRQVI 188
Query: 167 DKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGG 226
D +MDEL+ +KR +P E LL+VDAMTGQEAA+L F+ IG+TGAILTK+DGDSRGG
Sbjct: 189 DTDLMDELQRMKRAASPQETLLIVDAMTGQEAASLTAAFDSAIGLTGAILTKMDGDSRGG 248
Query: 227 AALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAE 286
AA+SV+ VSGKPIK VG GE+ DLEPFYPDRMA RILGMGDV+S VEKA + DA
Sbjct: 249 AAVSVRGVSGKPIKFVGTGEKTADLEPFYPDRMASRILGMGDVVSLVEKAASEVSDADAL 308
Query: 287 EMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMG-KITPAQVREAEKSLKIMEA 345
+MQ+K++ A+FDF+DF+KQ+ V +MGS++ + ++PGM ++ Q+RE E LK ++
Sbjct: 309 KMQQKMLDASFDFDDFVKQSELVTKMGSVAGIAKLMPGMANQLNMNQIREVEARLKKSKS 368
Query: 346 MIEAMTPEEREKPELLAESPVRRK---RVAQDSGKTEQQVSQLVAQLFQMRVRMKNLM 400
MI +MT +ER PELL + R R+ + SG + Q +++ FQ RMK +M
Sbjct: 369 MISSMTKKERANPELLIKDSSARSRLIRITKGSGCGLDEGQQFMSE-FQ---RMKTMM 422
>gi|300767270|ref|ZP_07077182.1| signal recognition particle protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308180484|ref|YP_003924612.1| signal recognition particle protein [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|418275233|ref|ZP_12890556.1| signal recognition particle protein Ffh [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448821152|ref|YP_007414314.1| Signal recognition particle protein [Lactobacillus plantarum ZJ316]
gi|300495089|gb|EFK30245.1| signal recognition particle protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308045975|gb|ADN98518.1| signal recognition particle protein [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|376008784|gb|EHS82113.1| signal recognition particle protein Ffh [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448274649|gb|AGE39168.1| Signal recognition particle protein [Lactobacillus plantarum ZJ316]
Length = 484
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/414 (47%), Positives = 283/414 (68%), Gaps = 10/414 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+IR ALLEADV+ VV+ FV+ V E+A+G ++ G+ P QQ+VKIV +EL K MG +
Sbjct: 32 MREIRLALLEADVNFTVVKDFVKTVRERALGAKVLEGLNPAQQIVKIVDEELTKTMGEKA 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
L + PTVI++AGLQG GKTT KLA LK +Q +++A DVYRPAAI+QL
Sbjct: 92 VPLNKSPKIPTVIMMAGLQGAGKTTTVGKLALKLKNEQDARPLMIAADVYRPAAIEQLQQ 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G Q+ VPV+ GT+V P +I +QG+ +A++ + D V +DTAGRLQID+ +M+EL ++K
Sbjct: 152 VGRQIDVPVFQLGTDVDPVEIVRQGMAQAQENHNDYVFIDTAGRLQIDEQLMNELANIKD 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+++P E+LLV+DAMTGQ A FN ++ +TG +LTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 LVHPDEILLVIDAMTGQNAVNTAEGFNDKLDVTGVVLTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+M DL+ F+PDRMA RILGMGD+L+ +EKAQ+ ++ AEEM KI FDF
Sbjct: 272 KFVGQGEKMTDLDVFHPDRMADRILGMGDMLTLIEKAQQQYDEKQAEEMNLKIQENTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDF+ Q V +MG+M ++ MIPGM PA + K + + A++ +MT E+
Sbjct: 332 NDFIDQLDQVDKMGNMEDIMKMIPGMAN-NPAMKNINMDPKDIAHIRAIVYSMTNAEKAD 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPAL 411
P+LL +P RR+R+A SG+ +V++++ Q Q K +M M G+ +
Sbjct: 391 PDLL--NPSRRRRIAAGSGRPIHEVNRMIKQFNQ----TKKMMNQMSKGNFAGM 438
>gi|410727088|ref|ZP_11365311.1| signal recognition particle protein [Clostridium sp. Maddingley
MBC34-26]
gi|410599423|gb|EKQ53976.1| signal recognition particle protein [Clostridium sp. Maddingley
MBC34-26]
Length = 450
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/388 (46%), Positives = 278/388 (71%), Gaps = 2/388 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV++F+ +VS + VG ++ + P QQ++KIV +EL LMGG
Sbjct: 32 MREVKLALLEADVNYKVVKQFISSVSSKCVGSEVLESLTPGQQVIKIVNEELTNLMGGSE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S++ ++ S T+I+L GLQG GKTT+ KLA L+K K +LVA D+YRPAAI QL ++
Sbjct: 92 SKINYSSSGLTIIMLVGLQGAGKTTMCGKLALNLRKDNKKPLLVACDIYRPAAIKQLEVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV++ G +V P +IAK G+ AK +VVI+DTAGRL ID+ +M ELKD+K
Sbjct: 152 GKQIEIPVFSMGDKVNPVEIAKNGIAHAKDNGNNVVIIDTAGRLHIDEELMHELKDIKEN 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P+E+LLVVDAMTGQ+A + +FN ++ + G ILTKLDGD+RGGAALS+K + KPIK
Sbjct: 212 VKPSEILLVVDAMTGQDAVNVAESFNNDLDLNGVILTKLDGDTRGGAALSIKSIINKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE+M D E F+PDRMA RILGMGDVLS +EKAQE + +++A ++ K++++ F+F
Sbjct: 272 YAGVGEKMNDFEVFHPDRMASRILGMGDVLSLIEKAQEAIDEKEAADLGKRMLNQEFNFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
D+L + ++G +++++ MIPG+ ++ ++ ++L +A+I++MT +ER P
Sbjct: 332 DYLMAMEQMKKLGPLNKIMEMIPGLNTKELQGFDFDKSSEALDRTKAIIQSMTSKERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLV 386
L+ +SP R+ R+A+ SG Q+V++L+
Sbjct: 392 NLILKSPSRKTRIAKGSGTNIQEVNKLM 419
>gi|163752849|ref|ZP_02159973.1| signal recognition particle protein [Kordia algicida OT-1]
gi|161326581|gb|EDP97906.1| signal recognition particle protein [Kordia algicida OT-1]
Length = 443
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/390 (48%), Positives = 274/390 (70%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL+ADV+ + + F + V E+A+G ++ ++P Q +VKIV+DEL LMGG+
Sbjct: 31 LKEVRRALLDADVNFKIAKDFTKRVKEKALGQNVLTTLQPGQLMVKIVKDELTDLMGGDA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ + + +P++IL++GLQG GKTT S KLANYLK K+ K +LVA DVYRPAAIDQL +
Sbjct: 91 AGINLS-GKPSIILMSGLQGSGKTTFSGKLANYLKNKKTKKPLLVACDVYRPAAIDQLHV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+G+Q+ V VY+ P IA+ G+ AK+ +VVI+DTAGRL +D+AMM E+ ++ +
Sbjct: 150 VGDQIKVDVYSDKGNNDPVAIAQAGIAHAKQNGHNVVIIDTAGRLAVDEAMMTEIANIHK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVD+MTGQ+A FN + G ILTKLDGD+RGGAA+S+K V KPI
Sbjct: 210 AIEPQETLFVVDSMTGQDAVNTAKAFNDILNFDGVILTKLDGDTRGGAAISIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+ME ++ FYP RMA RILGMGDV+S VE+AQE +E+A ++QKKI F F
Sbjct: 270 KFIGTGEKMEAIDVFYPSRMADRILGMGDVVSLVERAQEQFDEEEARKLQKKIAKNQFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DFLKQ + V +MG+M ++GMIPG K E + + K +EA+I +MTP ER KP
Sbjct: 330 DDFLKQIQQVKKMGNMKDLVGMIPGASKAMKGMEIE-DDAFKHIEALIHSMTPAERSKPS 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
++ S R+KR+A+ +G++ Q+++QL+ Q
Sbjct: 389 MINAS--RKKRIAKGAGRSVQEMNQLLKQF 416
>gi|182417247|ref|ZP_02948600.1| signal recognition particle protein [Clostridium butyricum 5521]
gi|237668219|ref|ZP_04528203.1| signal recognition particle protein [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182378893|gb|EDT76406.1| signal recognition particle protein [Clostridium butyricum 5521]
gi|237656567|gb|EEP54123.1| signal recognition particle protein [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 452
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/388 (47%), Positives = 277/388 (71%), Gaps = 2/388 (0%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MR+++ ALLEADV+ VV+ FV VS + VG ++ + P QQ++KIV +EL LMGG
Sbjct: 32 MREVKLALLEADVNYKVVKTFVSNVSSKCVGSEVLESLTPGQQVIKIVNEELTNLMGGSE 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVIL 120
S+L + S PTVI+L GLQG GKTT+ KLA L+K K +LVA D+YRPAAI QL ++
Sbjct: 92 SKLSYNSSGPTVIMLVGLQGAGKTTMCGKLALNLRKDNKKPLLVACDIYRPAAIKQLEVV 151
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ +PV++ G +V P IAK G+ A+ ++VI+DTAGRL ID+ +M ELKD+K
Sbjct: 152 GKQIEIPVFSMGDKVSPVDIAKAGIAHARDNGNNIVIIDTAGRLHIDEDLMQELKDIKEN 211
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
+ P+E+LLVVD+MTGQ+A + FN ++ ++G ILTKLDGD+RGGAALS+K + KPIK
Sbjct: 212 VKPSEILLVVDSMTGQDAVNVAENFNNDLDLSGVILTKLDGDTRGGAALSIKSIINKPIK 271
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
VG GE+M D E F+PDRMA RILGMGDVLS +EKAQE + +++A ++ K++++ F+F
Sbjct: 272 YVGLGEKMNDFEVFHPDRMASRILGMGDVLSLIEKAQEAIDEKEAADLGKRMLNQEFNFE 331
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGMG--KITPAQVREAEKSLKIMEAMIEAMTPEEREKP 358
D+L + ++G +++++ M+PGM ++ + + E ++ + +A+I +MT +ER P
Sbjct: 332 DYLMAMEQMKKLGPLNKILEMMPGMNSKELQGLDLEKGEVAMNVTKAIIYSMTLKERRNP 391
Query: 359 ELLAESPVRRKRVAQDSGKTEQQVSQLV 386
L+A+S R+ R+A+ SG + Q+V++L+
Sbjct: 392 TLIAKSNSRKIRIAKGSGTSVQEVNKLM 419
>gi|433448715|ref|ZP_20411581.1| signal recognition particle protein [Weissella ceti NC36]
gi|429539642|gb|ELA07678.1| signal recognition particle protein [Weissella ceti NC36]
Length = 479
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/411 (47%), Positives = 283/411 (68%), Gaps = 10/411 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+IR A+L+ADV+ VV+ F++ V E+A G ++ G+ P QQ+V IV +E+V +MG
Sbjct: 32 LREIRMAMLDADVNYTVVKEFIRNVREKAAGAKVLDGLNPAQQIVSIVNEEMVAMMGETD 91
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKS-CMLVAGDVYRPAAIDQLVI 119
L + PTVI++ GLQG GKTT + KLA LK++ + ++A D+YRPAAIDQL +
Sbjct: 92 VPLNKSPKIPTVIMMVGLQGAGKTTTAGKLAYKLKEENNARPFMIAADIYRPAAIDQLKV 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+Q+ VPV+ GT+V P +I +QG++ A++ D V +D AGRLQID+A+M EL D+K
Sbjct: 152 LGQQIDVPVFDLGTDVDPREIVRQGMDAAREAKADYVFIDAAGRLQIDEALMQELADIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E++LVVDAMTGQ A FN +GITG LTKLDGD+RGGAALS++ V+G+PI
Sbjct: 212 IAQPDEIMLVVDAMTGQNATETAEGFNERLGITGVTLTKLDGDTRGGAALSIRAVTGQPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG+GE+M DL+ F+PDRMA RILGMGD+L+ +EKAQ+ ++ A+ +K+ FDF
Sbjct: 272 KFVGQGEKMTDLDVFHPDRMASRILGMGDMLTLIEKAQKDFDEKQAQATMEKMKDKTFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPA--QVREAEKSLKIMEAMIEAMTPEEREK 357
NDFL Q + V MG M ++ MIPGM PA V+ +K + ++A++ +MTP ERE
Sbjct: 332 NDFLDQMQQVQNMGPMEDILKMIPGMAN-NPALQNVQINDKDMAHIKAIVYSMTPAEREN 390
Query: 358 PELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSL 408
P+LL +P RR+R+A +G+ +V++L+ Q + MK +MG + G++
Sbjct: 391 PDLL--NPSRRRRLAAGAGRPVVEVNKLIKQFNE----MKKMMGQVMNGNM 435
>gi|313889472|ref|ZP_07823120.1| signal recognition particle protein [Streptococcus pseudoporcinus
SPIN 20026]
gi|416851751|ref|ZP_11908896.1| signal recognition particle protein [Streptococcus pseudoporcinus
LQ 940-04]
gi|313122304|gb|EFR45395.1| signal recognition particle protein [Streptococcus pseudoporcinus
SPIN 20026]
gi|356739240|gb|EHI64472.1| signal recognition particle protein [Streptococcus pseudoporcinus
LQ 940-04]
Length = 517
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/406 (48%), Positives = 279/406 (68%), Gaps = 7/406 (1%)
Query: 2 RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS 61
++IR ALLEADV+LPVV+ F++ V E+AVG +I + P QQ+VKIV +EL ++G E +
Sbjct: 33 KEIRLALLEADVALPVVKTFIKQVRERAVGHEIIDTLDPTQQIVKIVNEELTDILGSETA 92
Query: 62 ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYL-KKQGKSCMLVAGDVYRPAAIDQLVIL 120
+ A PT+I++ GLQG GKTT + KLAN L K++ +++A D+YRPAAIDQL L
Sbjct: 93 TIEKAPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTL 152
Query: 121 GEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKRV 180
G+Q+ VPV+ GT+ +I +QGL A++ D V++DTAGRLQID+ +M EL+DVK +
Sbjct: 153 GQQINVPVFDMGTDYPAVEIVRQGLTLARENRNDYVLIDTAGRLQIDEKLMTELRDVKAL 212
Query: 181 LNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIK 240
NP E+LLVVD+M GQEAA + FN ++ ITG +LTK+DGD+RGGAALSV+E++GKPIK
Sbjct: 213 ANPNEILLVVDSMIGQEAANVADEFNKQLEITGVVLTKIDGDTRGGAALSVREITGKPIK 272
Query: 241 LVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFN 300
G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ FDFN
Sbjct: 273 FTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEQKSLELAEKMRENTFDFN 332
Query: 301 DFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
DF+ Q V MG M ++ MIPGM G A ++ EK + A++ +MT ERE P+
Sbjct: 333 DFIDQLDQVQNMGPMEDLLKMIPGMAGNPALANIKIDEKQIARKRAIVSSMTKAERENPD 392
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
LL +P RR+R+A SG + V++ + Q + M+ GVM G
Sbjct: 393 LL--NPSRRRRIAAGSGNSFVDVNKFIKDFNQAKAMMQ---GVMSG 433
>gi|194336566|ref|YP_002018360.1| signal recognition particle protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309043|gb|ACF43743.1| signal recognition particle protein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 449
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/415 (50%), Positives = 279/415 (67%), Gaps = 5/415 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
MRDI+RALL ADV+ V ++ + + E+++G +I+ V P Q +VKIV DEL +LMGGE
Sbjct: 31 MRDIKRALLGADVNYKVAKKLIDDIREKSLGEQVIKSVSPAQMIVKIVYDELTELMGGEQ 90
Query: 61 SELVFA-KSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
L + K P VI++AGLQG GKTT AKLA LKK GK MLVA DVYRPAAIDQL
Sbjct: 91 KPLNLSPKKLPAVIMVAGLQGSGKTTFCAKLALRLKKSGKQPMLVAADVYRPAAIDQLKA 150
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LG+QV VPV+ A E + A QGLE A+ DVVIVDTAGRLQID+ MM E + +K
Sbjct: 151 LGQQVDVPVF-AIEEQDAMKAALQGLEAARSAAKDVVIVDTAGRLQIDQVMMAEAESLKH 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
L P E+L VVD+M GQEA FN + G +LTKLDGDSRGGAALS+++V KPI
Sbjct: 210 ALKPDELLFVVDSMMGQEAVNTAKAFNDRLDFDGVVLTKLDGDSRGGAALSIRQVVEKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K + GE+++DL+ FYPDRMA RILGMGD++SFVEKAQE + E + EMQKK+M FD
Sbjct: 270 KFISIGEKVDDLDLFYPDRMAQRILGMGDIVSFVEKAQENLDLEKSLEMQKKLMKNEFDL 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDF Q + + +MGS+ +I M+PG+ K+ P Q E K +EAMI +MT +E+ P+
Sbjct: 330 NDFFDQLQQLKKMGSIQGLIEMVPGLNKMVPKQDLE-NLDFKPIEAMINSMTKQEKMTPD 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSLPALSNL 414
++ S RR+R+A+ SG Q+V+ L+ Q +M+ M+++ + + G NL
Sbjct: 389 IINGS--RRQRIARGSGTKVQEVNLLLKQFGEMKKMMRSVSKLSQSGRKITSQNL 441
>gi|160880541|ref|YP_001559509.1| signal recognition particle protein [Clostridium phytofermentans
ISDg]
gi|160429207|gb|ABX42770.1| signal recognition particle protein [Clostridium phytofermentans
ISDg]
Length = 454
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/413 (49%), Positives = 284/413 (68%), Gaps = 10/413 (2%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
+R+++ ALLEADV+ VV+ FV +V E+A+G ++ + P Q +VKIV +E+VKLMG E
Sbjct: 32 LREVKMALLEADVNFKVVKNFVNSVQERAIGQEVMTSLTPGQMVVKIVNEEMVKLMGDET 91
Query: 61 SELVFAK-SRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVI 119
+EL S TVI++ GLQG GKTT AKLA K +GK +LVA D+YRPAA+DQL I
Sbjct: 92 TELTLKPGSEITVIMMCGLQGAGKTTTIAKLAGKFKAKGKKPLLVACDIYRPAAVDQLQI 151
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
GE+ GVPV+ GT KP IAK +E A K ++VI+DTAGRL ID+ MMDEL ++K
Sbjct: 152 NGEKQGVPVFAMGTNHKPVNIAKAAMEHAAKNGNNIVIIDTAGRLHIDEDMMDELIEIKE 211
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
++ V+L VDAMTGQ+A + TFN +IGITG ILTKLDGD+RGGAALS++ V+GKPI
Sbjct: 212 NIHIDHVILTVDAMTGQDAVNVAETFNEKIGITGVILTKLDGDTRGGAALSIRAVTGKPI 271
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
+G GE++ DLE FYPDRMA RILGMGDVL+ ++K Q + ++ A+E+++KI A FDF
Sbjct: 272 LYIGMGEKLSDLEQFYPDRMASRILGMGDVLTLIDKVQAEIDEDKAKELERKIKKAEFDF 331
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVR-------EAEKSLKIMEAMIEAMTP 352
ND+L Q + + +MG + +++ M+PG ++ E E +LK +EA+I +MT
Sbjct: 332 NDYLDQMQQMKKMGGIQKLVEMLPGGMGGMGSKANMKDIDWDEGENALKGIEAIIYSMTK 391
Query: 353 EEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 405
EER P+LL +P R+KR+A +G +V+++V Q + R MK G++ G
Sbjct: 392 EERRNPDLL--NPSRKKRIADGAGVDISEVNRVVKQFGETRKMMKQFSGMLGG 442
>gi|374384305|ref|ZP_09641831.1| signal recognition particle protein [Odoribacter laneus YIT 12061]
gi|373228912|gb|EHP51215.1| signal recognition particle protein [Odoribacter laneus YIT 12061]
Length = 441
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/402 (49%), Positives = 278/402 (69%), Gaps = 5/402 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RR+LL+ADV+ + + F V ++A+G+ ++ V+P Q +VKIV DEL +LMGG+
Sbjct: 31 LKEVRRSLLDADVNYKIAKDFTNRVKDKALGMNVLTAVKPGQLMVKIVHDELAELMGGKN 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ + K P ++L++GLQG GKTT S KLAN LK K+GK +LVA DVYRPAAI+QL +
Sbjct: 91 VD-IDVKGNPAIVLMSGLQGSGKTTFSGKLANMLKTKRGKKPLLVACDVYRPAAIEQLRV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
LGEQ+GVPVYT P IA+ + +AK + DVVIVDTAGRL ID+ MM E+ +K+
Sbjct: 150 LGEQIGVPVYTDENSKDPVGIAQAAIRQAKAEGKDVVIVDTAGRLAIDEQMMTEITAIKK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVDAMTGQ+A FN + G ILTKLDGD+RGGAALS++ V KPI
Sbjct: 210 AIEPNETLFVVDAMTGQDAVNTAKEFNERLDFDGVILTKLDGDTRGGAALSIRTVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K VG GE+ME ++ F+P+RMA RILGMGD++S VEKAQE E+A+++QKK+ F+F
Sbjct: 270 KFVGTGEKMEAIDAFHPERMADRILGMGDIVSLVEKAQEQFDAEEAKKLQKKLSKNQFNF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
NDFL Q + + +MG++ + MIPG+GK V + + K +EA+I +MTP ERE P+
Sbjct: 330 NDFLGQIQQIKKMGNIKDLASMIPGVGKALK-NVDIDDDAFKSVEAIIHSMTPMEREMPD 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMG 401
++ S RRKR+A SG T Q V++L+ Q + + MK L G
Sbjct: 389 IINGS--RRKRIALGSGTTVQDVNRLLKQFEESKKMMKMLSG 428
>gi|149371680|ref|ZP_01891096.1| signal recognition particle protein [unidentified eubacterium
SCB49]
gi|149355307|gb|EDM43867.1| signal recognition particle protein [unidentified eubacterium
SCB49]
Length = 442
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/390 (49%), Positives = 273/390 (70%), Gaps = 5/390 (1%)
Query: 1 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEV 60
++++RRALL+ADV+ + + F V ++A+G ++ ++P Q +VKIV+DEL LMGG+
Sbjct: 31 LKEVRRALLDADVNFKIAKEFTNTVKQKALGQDVLTALQPSQLMVKIVKDELTALMGGDA 90
Query: 61 SELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVI 119
+ + S P+VIL++GLQG GKTT S KLAN+LK K+ K +LVA DVYRPAAI+QL +
Sbjct: 91 AGVNLQGS-PSVILMSGLQGSGKTTFSGKLANFLKSKKTKKPLLVACDVYRPAAINQLHV 149
Query: 120 LGEQVGVPVYTAGTEVKPSQIAKQGLEEAKKKNVDVVIVDTAGRLQIDKAMMDELKDVKR 179
+GEQ+GV VY+ + P IA + AK+ +VVIVDTAGRL +D+AMM E+++V +
Sbjct: 150 VGEQIGVEVYSEEGNMDPVSIATNAIAHAKQNGHNVVIVDTAGRLAVDEAMMVEIENVHK 209
Query: 180 VLNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPI 239
+ P E L VVDAMTGQ+A TFN I G +LTKLDGD+RGGAA+S+K V KPI
Sbjct: 210 AIQPQETLFVVDAMTGQDAVNTAKTFNERINFDGVVLTKLDGDTRGGAAISIKSVVNKPI 269
Query: 240 KLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDF 299
K +G GE+M+ ++ FYP RMA RILGMGDV+S VE+AQE +++A ++QKKI F F
Sbjct: 270 KFIGTGEKMDAIDIFYPSRMADRILGMGDVVSLVERAQEQFDEDEARKLQKKIAKNQFGF 329
Query: 300 NDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPE 359
+DF+KQ + + +MGSM ++GMIPG GK V + + K +EA+I++MTP ER P
Sbjct: 330 DDFMKQIQQIKKMGSMKDLVGMIPGAGKALK-DVDIDDDAFKGIEAIIQSMTPAERTSPA 388
Query: 360 LLAESPVRRKRVAQDSGKTEQQVSQLVAQL 389
L+ S R+KR+A+ SG + QV+QL+ Q
Sbjct: 389 LINGS--RKKRIAKGSGTSVTQVNQLLKQF 416
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,570,949,965
Number of Sequences: 23463169
Number of extensions: 268819039
Number of successful extensions: 1268816
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9982
Number of HSP's successfully gapped in prelim test: 2162
Number of HSP's that attempted gapping in prelim test: 1235010
Number of HSP's gapped (non-prelim): 13965
length of query: 458
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 312
effective length of database: 8,933,572,693
effective search space: 2787274680216
effective search space used: 2787274680216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)