Citrus Sinensis ID: 012680
Local Sequence Feature Prediction
| Prediction and Method | Result |
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Function Prediction
Annotation transfered from Closely Related SWISS-PROT Entries 
Annotation ![]() | Function Description ![]() | Confidence Level ![]() | Reference Protein ![]() |
| Signal recognition particle 54 kDa protein, chloroplastic | Involved in cotranslational and post-translational sorting of thylakoid proteins. Binds GTP specifically. Activates the GTPase activity of CPFTSY when bound together. Required for light-harvesting chlorophyll a/b-binding protein (LHCP) integration into thylakoids. | confident | P37107 |
| Signal recognition particle protein | Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. | probable | P37105 |
| Signal recognition particle 54 kDa protein | Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. | probable | O27376 |
Spatial Structural Prediction
Structural Models Based on Templates
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Template: 2XXA, chain A Confidence level:very confident Coverage over the Query: 1-321,336-394 View the alignment between query and template View the model in PyMOL |
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Template: 2J37, chain W Confidence level:very confident Coverage over the Query: 1-445 View the alignment between query and template View the model in PyMOL |