Your job contains 1 sequence.
>012687
MFLHGTTEANLCRLSLILAKRVSRHNHLRFLSLEIMSTGQNGKVETTPSGSNASARLLSD
SHVDGNGLSGNEFYSSRGKNGRNRSRMSKWKVHQSASPSFSNEDFPPLDVNLVSSSKGGH
IDKMKTRIDLGPGQKTDIIVSTQLEDSPLSNYVSQHDDSSPSAPLFNKEMKHAHANASPY
KRNYFKHELDAKKWDSSHRLHNVEPFDICLSRRRNFRMEKENECRQTVDWTREGILRPGM
VLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGK
KRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTS
GRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGE
SRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012687
(458 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2087452 - symbol:AT3G14160 species:3702 "Arabi... 759 2.7e-75 1
TIGR_CMR|SPO_0042 - symbol:SPO_0042 "alkylated DNA repair... 215 5.5e-17 1
UNIPROTKB|P37462 - symbol:alkB "Alpha-ketoglutarate-depen... 192 1.8e-14 1
UNIPROTKB|Q4KB70 - symbol:alkB "Alkylated DNA repair prot... 190 3.0e-14 1
UNIPROTKB|P05050 - symbol:alkB species:83333 "Escherichia... 182 2.3e-13 1
UNIPROTKB|Q880N6 - symbol:alkB "DNA alkylation damage rep... 176 1.0e-12 1
UNIPROTKB|Q0C209 - symbol:alkB "Alkylated DNA repair prot... 175 1.3e-12 1
UNIPROTKB|Q48JG4 - symbol:alkB "Alkylated DNA repair prot... 172 2.8e-12 1
POMBASE|SPBC13G1.04c - symbol:abh1 "alkB homolog/2-OG-Fe(... 158 1.1e-09 3
FB|FBgn0065035 - symbol:AlkB "AlkB" species:7227 "Drosoph... 143 5.4e-07 1
DICTYBASE|DDB_G0285575 - symbol:alkB "alkylated DNA repai... 142 1.0e-06 1
ZFIN|ZDB-GENE-050522-196 - symbol:alkbh1 "alkB, alkylatio... 135 5.3e-06 1
TAIR|locus:2027347 - symbol:AT1G11780 species:3702 "Arabi... 134 6.0e-06 1
UNIPROTKB|Q5F3E4 - symbol:ALKBH1 "Uncharacterized protein... 134 6.9e-06 1
UNIPROTKB|Q13686 - symbol:ALKBH1 "Alkylated DNA repair pr... 134 7.6e-06 1
MGI|MGI:2384034 - symbol:Alkbh1 "alkB, alkylation repair ... 129 2.7e-05 1
UNIPROTKB|E2RSQ8 - symbol:ALKBH1 "Uncharacterized protein... 128 3.5e-05 1
RGD|1308327 - symbol:Alkbh1 "alkB, alkylation repair homo... 129 7.4e-05 2
>TAIR|locus:2087452 [details] [associations]
symbol:AT3G14160 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR005123
PROSITE:PS51471 EMBL:CP002686 GO:GO:0016706 GO:GO:0016702
Pfam:PF13532 EMBL:AP000600 IPI:IPI00541399 RefSeq:NP_566479.5
UniGene:At.8249 ProteinModelPortal:Q9LJH2 SMR:Q9LJH2 PRIDE:Q9LJH2
EnsemblPlants:AT3G14160.1 GeneID:820633 KEGG:ath:AT3G14160
TAIR:At3g14160 HOGENOM:HOG000122277 InParanoid:Q9LJH2
PhylomeDB:Q9LJH2 ProtClustDB:CLSN2684917 Genevestigator:Q9LJH2
Uniprot:Q9LJH2
Length = 455
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 140/224 (62%), Positives = 178/224 (79%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++RPGMVLLK+YL+I +Q++IV C+ LG G GGFYQPGY D AKL L+MMCLG +WDP+
Sbjct: 232 VIRPGMVLLKNYLSINDQVMIVNKCRRLGLGEGGFYQPGYRDEAKLHLKMMCLGKNWDPE 291
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
T +YG+ R DG IP+EF Q V++++ E+ +L +SK + D +P + PDICIV
Sbjct: 292 TSRYGETRPFDGSTAPRIPAEFNQFVEKAVKESQSLAASNSKQTKGGDEIPFMLPDICIV 351
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
NFY+++GRLGLHQD+DES S++KGLPVVSFS+GDSAEFLYGD+RD +KAE + LESGDV
Sbjct: 352 NFYSSTGRLGLHQDKDESENSIRKGLPVVSFSIGDSAEFLYGDQRDEDKAETLTLESGDV 411
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQY 458
L+FGG SR VFHGV SI ++AP ALL+ T LRPGRLNLTFRQY
Sbjct: 412 LLFGGRSRKVFHGVRSIRKDTAPKALLQETSLRPGRLNLTFRQY 455
>TIGR_CMR|SPO_0042 [details] [associations]
symbol:SPO_0042 "alkylated DNA repair protein, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0016491 "oxidoreductase activity" evidence=ISS]
InterPro:IPR005123 PROSITE:PS51471 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016706 Pfam:PF13532
HOGENOM:HOG000122276 KO:K03919 OMA:DRLRFHG RefSeq:YP_165315.1
ProteinModelPortal:Q5LWJ7 GeneID:3194568 KEGG:sil:SPO0042
PATRIC:23373315 ProtClustDB:CLSK2308420 Uniprot:Q5LWJ7
Length = 198
Score = 215 (80.7 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 48/109 (44%), Positives = 65/109 (59%)
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
+PD C++N+Y R+GLHQDRDE+ + PVVS S+GD A F G+ K E V
Sbjct: 97 APDCCLINYYGEGARMGLHQDRDEADLTW----PVVSLSLGDDALFRIGNTSRGGKTESV 152
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L SGDV++ GG +R ++HG+ I S+ LL + GRLNLT R
Sbjct: 153 WLNSGDVVVMGGPARLIYHGIDRIRFGSS--RLLP----KGGRLNLTLR 195
>UNIPROTKB|P37462 [details] [associations]
symbol:alkB "Alpha-ketoglutarate-dependent dioxygenase
AlkB" species:99287 "Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2" [GO:0006307 "DNA dealkylation involved in DNA
repair" evidence=ISS] [GO:0042245 "RNA repair" evidence=ISS]
[GO:0043734 "DNA-N1-methyladenine dioxygenase activity"
evidence=ISS] [GO:0051747 "cytosine C-5 DNA demethylase activity"
evidence=ISS] [GO:0070989 "oxidative demethylation" evidence=ISS]
[GO:0080111 "DNA demethylation" evidence=ISS] InterPro:IPR005123
PROSITE:PS51471 GO:GO:0046872 GO:GO:0006307 EMBL:AE006468
GenomeReviews:AE006468_GR GO:GO:0016702 eggNOG:COG3145
GO:GO:0070989 GO:GO:0042245 Pfam:PF13532 GO:GO:0051747
GO:GO:0043734 HOGENOM:HOG000122276 KO:K03919 OMA:DRLRFHG
ProtClustDB:PRK15401 EMBL:D90221 PIR:B39433 RefSeq:NP_461207.1
ProteinModelPortal:P37462 SMR:P37462 GeneID:1253786
KEGG:stm:STM2264 PATRIC:32383137 Uniprot:P37462
Length = 216
Score = 192 (72.6 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 43/112 (38%), Positives = 64/112 (57%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPIQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>UNIPROTKB|Q4KB70 [details] [associations]
symbol:alkB "Alkylated DNA repair protein AlkB"
species:220664 "Pseudomonas protegens Pf-5" [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=ISS] InterPro:IPR005123 PROSITE:PS51471
GO:GO:0016706 GO:GO:0016702 EMBL:CP000076 GenomeReviews:CP000076_GR
eggNOG:COG3145 Pfam:PF13532 HOGENOM:HOG000122276 KO:K03919
OMA:DRLRFHG ProtClustDB:PRK15401 RefSeq:YP_260513.1
ProteinModelPortal:Q4KB70 SMR:Q4KB70 STRING:Q4KB70 DNASU:3476301
GeneID:3476301 KEGG:pfl:PFL_3408 PATRIC:19876147
BioCyc:PFLU220664:GIX8-3423-MONOMER Uniprot:Q4KB70
Length = 226
Score = 190 (71.9 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 41/113 (36%), Positives = 66/113 (58%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P +PD C++N Y ++ LHQD++E YS P+VS S+G A FL+G + ++K+
Sbjct: 123 PGFAPDSCLINCYRPGAKMSLHQDKNERDYSA----PIVSLSLGLPAIFLFGGRQRSDKS 178
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++V L GDV+++GG R +HGV ++ P +L R+NLT R+
Sbjct: 179 QRVALLHGDVVVWGGVDRLRYHGVLALKDGHHP-------LLGQQRINLTLRR 224
>UNIPROTKB|P05050 [details] [associations]
symbol:alkB species:83333 "Escherichia coli K-12"
[GO:0051213 "dioxygenase activity" evidence=IDA] [GO:0070989
"oxidative demethylation" evidence=IDA] [GO:0080111 "DNA
demethylation" evidence=IDA] [GO:0051747 "cytosine C-5 DNA
demethylase activity" evidence=IDA] [GO:0043734
"DNA-N1-methyladenine dioxygenase activity" evidence=IDA]
[GO:0042245 "RNA repair" evidence=IDA] [GO:0035553 "oxidative
single-stranded RNA demethylation" evidence=IDA] [GO:0035552
"oxidative single-stranded DNA demethylation" evidence=IDA]
[GO:0035515 "oxidative RNA demethylase activity" evidence=IDA]
[GO:0006307 "DNA dealkylation involved in DNA repair" evidence=IDA]
[GO:0008198 "ferrous iron binding" evidence=IDA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;IMP]
InterPro:IPR004574 InterPro:IPR005123 PROSITE:PS51471 GO:GO:0008198
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006307 GO:GO:0016702 EMBL:M10315
EMBL:U00008 EMBL:J02607 eggNOG:COG3145 GO:GO:0042245 Pfam:PF13532
TIGRFAMs:TIGR00568 GO:GO:0051747 GO:GO:0043734 GO:GO:0035552
PIR:A24605 RefSeq:NP_416716.1 RefSeq:YP_490450.1 PDB:2FD8 PDB:2FDF
PDB:2FDG PDB:2FDH PDB:2FDI PDB:2FDJ PDB:2FDK PDB:3BI3 PDB:3BIE
PDB:3BKZ PDB:3I2O PDB:3I3M PDB:3I3Q PDB:3I49 PDB:3KHB PDB:3KHC
PDB:3O1M PDB:3O1O PDB:3O1P PDB:3O1R PDB:3O1S PDB:3O1T PDB:3O1U
PDB:3O1V PDB:3T3Y PDB:3T4H PDB:3T4V PDBsum:2FD8 PDBsum:2FDF
PDBsum:2FDG PDBsum:2FDH PDBsum:2FDI PDBsum:2FDJ PDBsum:2FDK
PDBsum:3BI3 PDBsum:3BIE PDBsum:3BKZ PDBsum:3I2O PDBsum:3I3M
PDBsum:3I3Q PDBsum:3I49 PDBsum:3KHB PDBsum:3KHC PDBsum:3O1M
PDBsum:3O1O PDBsum:3O1P PDBsum:3O1R PDBsum:3O1S PDBsum:3O1T
PDBsum:3O1U PDBsum:3O1V PDBsum:3T3Y PDBsum:3T4H PDBsum:3T4V
ProteinModelPortal:P05050 SMR:P05050 DIP:DIP-9085N IntAct:P05050
MINT:MINT-1258339 EnsemblBacteria:EBESCT00000002153
EnsemblBacteria:EBESCT00000002154 EnsemblBacteria:EBESCT00000017253
GeneID:12932924 GeneID:946708 KEGG:ecj:Y75_p2173 KEGG:eco:b2212
PATRIC:32119783 EchoBASE:EB0036 EcoGene:EG10037
HOGENOM:HOG000122276 KO:K03919 OMA:DRLRFHG ProtClustDB:PRK15401
BioCyc:EcoCyc:EG10037-MONOMER BioCyc:ECOL316407:JW2200-MONOMER
BioCyc:MetaCyc:EG10037-MONOMER EvolutionaryTrace:P05050
Genevestigator:P05050 GO:GO:0035515 GO:GO:0035553 Uniprot:P05050
Length = 216
Score = 182 (69.1 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 43/113 (38%), Positives = 63/113 (55%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G + +
Sbjct: 110 PDFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPL 165
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++LLE GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 166 KRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTI-------DCRYNLTFRQ 211
>UNIPROTKB|Q880N6 [details] [associations]
symbol:alkB "DNA alkylation damage repair protein AlkB"
species:223283 "Pseudomonas syringae pv. tomato str. DC3000"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR005123
PROSITE:PS51471 GO:GO:0016706 EMBL:AE016853
GenomeReviews:AE016853_GR eggNOG:COG3145 Pfam:PF13532
HOGENOM:HOG000122276 KO:K03919 OMA:DRLRFHG ProtClustDB:PRK15401
RefSeq:NP_792910.1 ProteinModelPortal:Q880N6 DNASU:1184775
GeneID:1184775 KEGG:pst:PSPTO_3118 PATRIC:19997609
BioCyc:PSYR223283:GJIX-3167-MONOMER Uniprot:Q880N6
Length = 228
Score = 176 (67.0 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 41/109 (37%), Positives = 62/109 (56%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD+DE + PVVS S+G A F +G + ++K ++
Sbjct: 126 PDACLINRYIPGAKMSLHQDKDEHDHRW----PVVSVSLGIPAIFQFGGMQRSDKTRRIS 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GGE R FHG+ I E+ +L R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGILPIKQ-------AEHPLLGEQRINLTFRK 223
>UNIPROTKB|Q0C209 [details] [associations]
symbol:alkB "Alkylated DNA repair protein AlkB"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003684
"damaged DNA binding" evidence=ISS] [GO:0006281 "DNA repair"
evidence=ISS] InterPro:IPR005123 PROSITE:PS51471 GO:GO:0003684
GO:GO:0006281 GO:GO:0016706 eggNOG:COG3145 Pfam:PF13532
HOGENOM:HOG000122276 KO:K03919 OMA:DRLRFHG ProtClustDB:PRK15401
EMBL:CP000158 GenomeReviews:CP000158_GR RefSeq:YP_760234.1
ProteinModelPortal:Q0C209 SMR:Q0C209 STRING:Q0C209 GeneID:4289592
KEGG:hne:HNE_1522 PATRIC:32215871
BioCyc:HNEP228405:GI69-1555-MONOMER Uniprot:Q0C209
Length = 216
Score = 175 (66.7 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 43/108 (39%), Positives = 58/108 (53%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y +L LHQDR+E ++ P+VS S+G A F +G R A+ K
Sbjct: 117 PDTCLINRYEPGAKLSLHQDRNEREFAH----PIVSVSLGLPATFQFGGLRRADPIRKYA 172
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L GDV ++GG SR HGV ++ + P L RLNLTFR
Sbjct: 173 LRHGDVAVWGGPSRLCHHGVLALKEGAHP-------KLGRMRLNLTFR 213
>UNIPROTKB|Q48JG4 [details] [associations]
symbol:alkB "Alkylated DNA repair protein AlkB"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003684 "damaged DNA binding" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR005123 PROSITE:PS51471
GO:GO:0003684 GO:GO:0006281 GO:GO:0016706 EMBL:CP000058
GenomeReviews:CP000058_GR eggNOG:COG3145 Pfam:PF13532
HOGENOM:HOG000122276 KO:K03919 OMA:DRLRFHG ProtClustDB:PRK15401
RefSeq:YP_274464.1 ProteinModelPortal:Q48JG4 SMR:Q48JG4
STRING:Q48JG4 GeneID:3557833 KEGG:psp:PSPPH_2255 PATRIC:19973761
Uniprot:Q48JG4
Length = 228
Score = 172 (65.6 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 41/109 (37%), Positives = 63/109 (57%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD++E Y + PVVS S+G A F +G ++K +++
Sbjct: 126 PDACLINRYIPGAKMSLHQDKNE--YDHR--WPVVSVSLGIPATFQFGGLLRSDKTQRIS 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GGE R FHG+ P E+ +L R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGI-------LPVKQAEHPLLGEQRINLTFRK 223
>POMBASE|SPBC13G1.04c [details] [associations]
symbol:abh1 "alkB homolog/2-OG-Fe(II) oxygenase family
Abh1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006307 "DNA dealkylation involved in
DNA repair" evidence=ISS] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR004574 InterPro:IPR005123 PROSITE:PS51471
PomBase:SPBC13G1.04c GO:GO:0005829 GO:GO:0005634 GO:GO:0046872
GO:GO:0006307 EMBL:CU329671 GO:GO:0016706 GO:GO:0016702
eggNOG:COG3145 GO:GO:0003906 Pfam:PF13532 TIGRFAMs:TIGR00568
EMBL:AB548892 PIR:T39405 RefSeq:NP_596553.3 GeneID:2539935
HOGENOM:HOG000215431 OrthoDB:EOG4PG98Z NextBio:20801078
Uniprot:O60066
Length = 302
Score = 158 (60.7 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 42/113 (37%), Positives = 53/113 (46%)
Query: 350 DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLL 409
+ IVNFY+ L H D E +L P++S S+G +L G E + K + L
Sbjct: 189 EAAIVNFYSPGDTLSAHIDESEEDLTL----PLISLSMGLDCIYLIGTESRSEKPSALRL 244
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG-----RLNLTFRQ 457
SGDV+I G SR FH V I PNS P LL G R+N RQ
Sbjct: 245 HSGDVVIMTGTSRKAFHAVPKIIPNSTPNYLLTGNKAWDGWISRKRVNFNVRQ 297
Score = 41 (19.5 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 6/20 (30%), Positives = 16/20 (80%)
Query: 238 PGMVLLKHYLTIREQILIVR 257
PG+++LK+Y++ Q+ +++
Sbjct: 60 PGLLILKNYVSSELQMQLLK 79
Score = 38 (18.4 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAH 328
+LR + LG +D T++Y + G P + +++V+ S H
Sbjct: 139 KLRWVTLGEQYDWTTKEYPDPSKSPGF-PKDLGDFVEKVVKESTDFLH 185
>FB|FBgn0065035 [details] [associations]
symbol:AlkB "AlkB" species:7227 "Drosophila melanogaster"
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR005123 PROSITE:PS51471 EMBL:AE014298
GO:GO:0016706 eggNOG:COG3145 KO:K10765 Pfam:PF13532
GeneTree:ENSGT00390000004599 OMA:HAIPCIG EMBL:BT030983
EMBL:BK003152 RefSeq:NP_996458.1 UniGene:Dm.10934 SMR:Q7KUZ2
EnsemblMetazoa:FBtr0074168 GeneID:2768870 KEGG:dme:Dmel_CG33250
UCSC:CG33250-RA CTD:2768870 FlyBase:FBgn0065035 InParanoid:Q7KUZ2
OrthoDB:EOG4M9071 GenomeRNAi:2768870 NextBio:848390 Uniprot:Q7KUZ2
Length = 332
Score = 143 (55.4 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 35/92 (38%), Positives = 43/92 (46%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ IVN+Y L H D E K P+ SFS G +A FL G K +
Sbjct: 187 PEAAIVNYYPVGSTLSGHTDHSEPN----KSAPLFSFSFGQTAIFLIGGRSLEEKPTAIY 242
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGAL 440
L+SGDV+I GESR +H V I A L
Sbjct: 243 LQSGDVMIMSGESRLCYHAVPRIIKTQASATL 274
>DICTYBASE|DDB_G0285575 [details] [associations]
symbol:alkB "alkylated DNA repair protein"
species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR005123 dictyBase:DDB_G0285575
GenomeReviews:CM000153_GR GO:GO:0046872 EMBL:AAFI02000079
GO:GO:0006281 GO:GO:0016706 GO:GO:0016702 eggNOG:COG3145 KO:K10765
Pfam:PF13532 OMA:DALCQLA RefSeq:XP_638135.1
ProteinModelPortal:Q54N08 EnsemblProtists:DDB0234218 GeneID:8625183
KEGG:ddi:DDB_G0285575 InParanoid:Q54N08 ProtClustDB:CLSZ2728919
Uniprot:Q54N08
Length = 393
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 36/92 (39%), Positives = 53/92 (57%)
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDE-RDANKAEKVLLESG 412
VNFY+ +G H D ++ ++K P++S S G +A FL G E RD + + SG
Sbjct: 266 VNFYSEDSIMGGHLD--DAEQEMEK--PIISISFGSTAVFLMGAETRDIAPVP-LFIRSG 320
Query: 413 DVLIFGGESRHVFHGVSSINPNSAP-GALLEN 443
D++I GG SR+ +HGV+ I NS G + EN
Sbjct: 321 DIVIMGGRSRYCYHGVAKIVENSFDLGLIDEN 352
>ZFIN|ZDB-GENE-050522-196 [details] [associations]
symbol:alkbh1 "alkB, alkylation repair homolog 1
(E. coli)" species:7955 "Danio rerio" [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR005123
PROSITE:PS51471 ZFIN:ZDB-GENE-050522-196 GO:GO:0016706 Pfam:PF13532
GeneTree:ENSGT00390000004599 EMBL:CU695234 EMBL:CU855697
IPI:IPI00503865 Ensembl:ENSDART00000128887 Bgee:F1QW33
Uniprot:F1QW33
Length = 367
Score = 135 (52.6 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y + LG+H D E L P++S+S G +A FL G + ++ + + SG
Sbjct: 203 ILNYYRSDSSLGIHVDESE----LDHTRPLLSYSFGQTAVFLLGGTKREDRPTALFMHSG 258
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGAL 440
D+++ G SR +H V I P+ A L
Sbjct: 259 DIMVMSGPSRLHYHAVPCIVPSPAGNVL 286
>TAIR|locus:2027347 [details] [associations]
symbol:AT1G11780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR005123
PROSITE:PS51471 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0046872 GO:GO:0006281 GO:GO:0016706 GO:GO:0016702
eggNOG:COG3145 KO:K10765 Pfam:PF13532 EMBL:AC007296 EMBL:BT030097
IPI:IPI00528819 PIR:G86251 RefSeq:NP_172643.1 UniGene:At.42110
UniGene:At.75171 ProteinModelPortal:Q9SA98 SMR:Q9SA98 PaxDb:Q9SA98
PRIDE:Q9SA98 DNASU:837723 EnsemblPlants:AT1G11780.1 GeneID:837723
KEGG:ath:AT1G11780 TAIR:At1g11780 HOGENOM:HOG000006390
InParanoid:Q9SA98 OMA:DALCQLA PhylomeDB:Q9SA98
ProtClustDB:CLSN2682191 Genevestigator:Q9SA98 GermOnline:AT1G11780
Uniprot:Q9SA98
Length = 345
Score = 134 (52.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 35/95 (36%), Positives = 50/95 (52%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ IVN++ LG H D E+ +S P+VS S+G A FL G + + +
Sbjct: 226 PEGAIVNYFGIGDTLGGHLDDMEADWSK----PIVSMSLGCKAIFLLGGKSKDDPPHAMY 281
Query: 409 LESGDVLIFGGESRHVFHGVSSI---NPNSAPGAL 440
L SGDV++ GE+R FHG+ I N+ GAL
Sbjct: 282 LRSGDVVLMAGEARECFHGIPRIFTGEENADIGAL 316
>UNIPROTKB|Q5F3E4 [details] [associations]
symbol:ALKBH1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001890 "placenta development" evidence=IEA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006307 "DNA dealkylation
involved in DNA repair" evidence=IEA] [GO:0008198 "ferrous iron
binding" evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0042056 "chemoattractant activity" evidence=IEA]
[GO:0042245 "RNA repair" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0070579 "methylcytosine
dioxygenase activity" evidence=IEA] [GO:0070989 "oxidative
demethylation" evidence=IEA] [GO:0080111 "DNA demethylation"
evidence=IEA] InterPro:IPR005123 PROSITE:PS51471 GO:GO:0005739
GO:GO:0030154 GO:GO:0008198 GO:GO:0006307 GO:GO:0080111
GO:GO:0048589 GO:GO:0005719 CTD:8846 eggNOG:COG3145
HOGENOM:HOG000033905 HOVERGEN:HBG050487 KO:K10765 OMA:KKYSADH
OrthoDB:EOG4868CJ GO:GO:0042056 GO:GO:0003906 GO:GO:0070579
GO:GO:0070989 GO:GO:0042245 Pfam:PF13532
GeneTree:ENSGT00390000004599 EMBL:AADN02003502 EMBL:AJ851706
IPI:IPI00598022 RefSeq:NP_001026723.1 UniGene:Gga.22733
STRING:Q5F3E4 Ensembl:ENSGALT00000017074 GeneID:428898
KEGG:gga:428898 InParanoid:Q5F3E4 NextBio:20829778 Uniprot:Q5F3E4
Length = 371
Score = 134 (52.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 30/88 (34%), Positives = 47/88 (53%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y+ LG+H D E +S P++SFS G S+ FL G + + + SG
Sbjct: 203 ILNYYHFDSSLGIHVDESELDHSR----PLLSFSFGQSSIFLLGGLKREEAPTAMFMHSG 258
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGAL 440
D+++ G SR ++H V + PN AL
Sbjct: 259 DIMVMSGFSRLLYHAVPRVLPNPEGTAL 286
>UNIPROTKB|Q13686 [details] [associations]
symbol:ALKBH1 "Alkylated DNA repair protein alkB homolog 1"
species:9606 "Homo sapiens" [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0042056 "chemoattractant activity" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0048589 "developmental growth" evidence=IEA] [GO:0080111 "DNA
demethylation" evidence=IDA] [GO:0008198 "ferrous iron binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006307
"DNA dealkylation involved in DNA repair" evidence=IDA] [GO:0006281
"DNA repair" evidence=IDA] [GO:0070989 "oxidative demethylation"
evidence=IDA] [GO:0042245 "RNA repair" evidence=IDA] [GO:0070579
"methylcytosine dioxygenase activity" evidence=IDA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IDA]
InterPro:IPR004574 InterPro:IPR005123 PROSITE:PS51471 GO:GO:0005739
GO:GO:0001764 GO:GO:0008198 GO:GO:0006307 GO:GO:0001701
GO:GO:0080111 GO:GO:0016702 GO:GO:0001890 GO:GO:0048589
GO:GO:0005719 EMBL:X91992 EMBL:AC008044 EMBL:BC025787
IPI:IPI00014482 PIR:S64736 RefSeq:NP_006011.2 UniGene:Hs.94542
ProteinModelPortal:Q13686 STRING:Q13686 PhosphoSite:Q13686
DMDM:12643239 PRIDE:Q13686 DNASU:8846 Ensembl:ENST00000216489
GeneID:8846 KEGG:hsa:8846 UCSC:uc001xuc.1 CTD:8846
GeneCards:GC14M078138 H-InvDB:HIX0011855 HGNC:HGNC:17911
HPA:HPA044087 MIM:605345 neXtProt:NX_Q13686 PharmGKB:PA134906996
eggNOG:COG3145 HOGENOM:HOG000033905 HOVERGEN:HBG050487
InParanoid:Q13686 KO:K10765 OMA:KKYSADH OrthoDB:EOG4868CJ
PhylomeDB:Q13686 GenomeRNAi:8846 NextBio:33208 ArrayExpress:Q13686
Bgee:Q13686 CleanEx:HS_ALKBH1 Genevestigator:Q13686
GermOnline:ENSG00000100601 GO:GO:0042056 GO:GO:0003906
GO:GO:0070579 GO:GO:0031175 GO:GO:0070989 GO:GO:0042245
Pfam:PF13532 TIGRFAMs:TIGR00568 Uniprot:Q13686
Length = 389
Score = 134 (52.2 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 33/83 (39%), Positives = 46/83 (55%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLES 411
I+N+Y LG+H DR E +S P++SFS G SA FL G +RD + + S
Sbjct: 218 ILNYYRLDSTLGIHVDRSELDHSK----PLLSFSFGQSAIFLLGGLQRD-EAPTAMFMHS 272
Query: 412 GDVLIFGGESRHVFHGVSSINPN 434
GD++I G SR + H V + PN
Sbjct: 273 GDIMIMSGFSRLLNHAVPRVLPN 295
>MGI|MGI:2384034 [details] [associations]
symbol:Alkbh1 "alkB, alkylation repair homolog 1 (E. coli)"
species:10090 "Mus musculus" [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IDA] [GO:0001890 "placenta development" evidence=IMP]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0008198 "ferrous iron binding" evidence=ISO] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0031175
"neuron projection development" evidence=IDA] [GO:0042056
"chemoattractant activity" evidence=IDA] [GO:0042245 "RNA repair"
evidence=ISO] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0050918 "positive chemotaxis" evidence=IDA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0070579
"methylcytosine dioxygenase activity" evidence=ISO] [GO:0070989
"oxidative demethylation" evidence=ISO] [GO:0080111 "DNA
demethylation" evidence=ISO] InterPro:IPR004574 InterPro:IPR005123
PROSITE:PS51471 MGI:MGI:2384034 GO:GO:0005739 GO:GO:0001764
GO:GO:0008198 GO:GO:0006307 GO:GO:0001701 GO:GO:0043524
GO:GO:0080111 GO:GO:0016702 GO:GO:0001890 GO:GO:0048589
GO:GO:0005719 CTD:8846 eggNOG:COG3145 HOGENOM:HOG000033905
KO:K10765 OMA:KKYSADH OrthoDB:EOG4868CJ GO:GO:0042056 GO:GO:0003906
GO:GO:0070579 GO:GO:0031175 GO:GO:0070989 GO:GO:0042245
Pfam:PF13532 TIGRFAMs:TIGR00568 EMBL:CT030249 IPI:IPI00858117
RefSeq:NP_001096035.1 UniGene:Mm.486235 ProteinModelPortal:P0CB42
SMR:P0CB42 STRING:P0CB42 PRIDE:P0CB42 Ensembl:ENSMUST00000162961
GeneID:211064 KEGG:mmu:211064 UCSC:uc007oix.1
GeneTree:ENSGT00390000004599 ChiTaRS:ALKBH1 NextBio:373138
Bgee:P0CB42 Uniprot:P0CB42
Length = 389
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E +S P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSELDHSK----PLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP 448
D+++ G SR + H V + P+ G L + + P
Sbjct: 274 DIMVMSGFSRLLNHAVPRVLPHP-DGECLPHCLETP 308
>UNIPROTKB|E2RSQ8 [details] [associations]
symbol:ALKBH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR004574 InterPro:IPR005123 PROSITE:PS51471
GO:GO:0006281 GO:GO:0016706 CTD:8846 KO:K10765 OMA:KKYSADH
Pfam:PF13532 TIGRFAMs:TIGR00568 GeneTree:ENSGT00390000004599
EMBL:AAEX03005881 RefSeq:XP_537525.3 Ensembl:ENSCAFT00000027288
GeneID:480404 KEGG:cfa:480404 NextBio:20855423 Uniprot:E2RSQ8
Length = 389
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E +S P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSELDHSK----PLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPN 434
D+++ G SR + H V + P+
Sbjct: 274 DIMVMSGFSRLLNHAVPRVLPS 295
>RGD|1308327 [details] [associations]
symbol:Alkbh1 "alkB, alkylation repair homolog 1 (E. coli)"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=ISO] [GO:0001764 "neuron migration"
evidence=ISO] [GO:0001890 "placenta development" evidence=ISO]
[GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
evidence=ISO] [GO:0005719 "nuclear euchromatin" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA;ISO] [GO:0006307 "DNA dealkylation involved in DNA
repair" evidence=ISO] [GO:0008198 "ferrous iron binding"
evidence=ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0031175 "neuron projection
development" evidence=ISO] [GO:0042056 "chemoattractant activity"
evidence=ISO] [GO:0042245 "RNA repair" evidence=ISO] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=ISO]
[GO:0048589 "developmental growth" evidence=ISO] [GO:0050918
"positive chemotaxis" evidence=ISO] [GO:0070579 "methylcytosine
dioxygenase activity" evidence=ISO] [GO:0070989 "oxidative
demethylation" evidence=ISO] [GO:0080111 "DNA demethylation"
evidence=ISO] InterPro:IPR004574 InterPro:IPR005123 PROSITE:PS51471
RGD:1308327 GO:GO:0005739 GO:GO:0001764 GO:GO:0008198 GO:GO:0006307
GO:GO:0001701 GO:GO:0080111 GO:GO:0001890 GO:GO:0048589
GO:GO:0005719 OrthoDB:EOG4868CJ GO:GO:0042056 GO:GO:0003906
GO:GO:0070579 GO:GO:0031175 GO:GO:0070989 GO:GO:0042245
Pfam:PF13532 TIGRFAMs:TIGR00568 GeneTree:ENSGT00390000004599
IPI:IPI00870398 Ensembl:ENSRNOT00000016389 UCSC:RGD:1308327
Uniprot:D3Z8W2
Length = 389
Score = 129 (50.5 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E +S P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSELDHSK----PLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP 448
D+++ G SR + H V + P+ G L + + P
Sbjct: 274 DIMVMSGFSRLLNHAVPRVLPHP-DGECLPHCLETP 308
Score = 37 (18.1 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 444 TMLRPGRLNLTFRQ 457
T L+ R+N+T RQ
Sbjct: 332 TYLKTARVNMTVRQ 345
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 458 444 0.00090 118 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 613 (65 KB)
Total size of DFA: 283 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.59u 0.13s 37.72t Elapsed: 00:00:02
Total cpu time: 37.60u 0.13s 37.73t Elapsed: 00:00:02
Start: Sat May 11 05:44:31 2013 End: Sat May 11 05:44:33 2013