BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012687
(458 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356495097|ref|XP_003516417.1| PREDICTED: uncharacterized protein LOC100818496 [Glycine max]
Length = 447
Score = 367 bits (941), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 185/313 (59%), Positives = 228/313 (72%), Gaps = 9/313 (2%)
Query: 154 SQHDDSSPSAPLFNKEMKHAHANASPYKRNYFKHELDAKKWDSSHRLHNVEPFDICLSRR 213
S D+ P F K+ K A N N ++ K D+S +PFDIC S R
Sbjct: 136 SNFDNELPQGSNFWKK-KPASVNRPYNSPNNSNYDAVGNKLDASVGSPMSKPFDICFSGR 194
Query: 214 RNFRM-------EKENECRQTVDW-TREGILRPGMVLLKHYLTIREQILIVRICQELGKG 265
RN + + E C + + + GILRPGMVLLK+Y+T+ EQ+ IV++C+ELG G
Sbjct: 195 RNPALIGATLPGDNEKSCIEMQEEKIKGGILRPGMVLLKNYITLDEQVEIVKVCRELGLG 254
Query: 266 PGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMS 325
PGGFYQPGY +GAKLRL+MMCLG+DW+PQ+ KYGKKR +DG +P IP F QLV R++
Sbjct: 255 PGGFYQPGYANGAKLRLKMMCLGMDWNPQSYKYGKKRVIDGSKPPSIPYHFSQLVIRAIQ 314
Query: 326 EAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSF 385
EAH++IK +++V VED LP+++PDICIVNFY +G+LGLHQD DESR SL+KGLPVVSF
Sbjct: 315 EAHSIIKKENRVFKVEDELPSMTPDICIVNFYTNNGKLGLHQDNDESRESLRKGLPVVSF 374
Query: 386 SVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTM 445
S+GDSAEFLYGDER+ KA+ VLLESGDVLIFGGESRHVFHGVSS+ PNSAP LL +T
Sbjct: 375 SIGDSAEFLYGDERNVEKADSVLLESGDVLIFGGESRHVFHGVSSVLPNSAPKELLRDTC 434
Query: 446 LRPGRLNLTFRQY 458
L PGRLNLTFRQY
Sbjct: 435 LCPGRLNLTFRQY 447
>gi|449464420|ref|XP_004149927.1| PREDICTED: uncharacterized protein LOC101210053 [Cucumis sativus]
Length = 444
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 177/259 (68%), Positives = 204/259 (78%), Gaps = 10/259 (3%)
Query: 205 PFDICLS-----RRRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRIC 259
PFDICL + RN + KE TV R +LRPGMVLLKHY+T REQI IV+ C
Sbjct: 191 PFDICLPGGGNVKHRNIYVVKEG---GTVKDYR--LLRPGMVLLKHYITPREQINIVKTC 245
Query: 260 QELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQL 319
Q LG GPGGFYQPGY DGAKLRLRMMCLGLDWDPQTR+Y KR VDG +P IP +F L
Sbjct: 246 QNLGIGPGGFYQPGYKDGAKLRLRMMCLGLDWDPQTRRYENKRVVDGNKPPDIPPQFTFL 305
Query: 320 VQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKG 379
V+R++ +AHA IK + +SNVE+ILP++SPDICI NFY T GRLGLHQDRDES+ SL +G
Sbjct: 306 VKRALKDAHAFIKNNCNISNVEEILPSMSPDICIANFYTTRGRLGLHQDRDESKESLWRG 365
Query: 380 LPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGA 439
LPVVSFSVG++AEFLYGD+R+ +KAE V LESGDVLIFGGESRH+FHGVSSI P S P
Sbjct: 366 LPVVSFSVGNAAEFLYGDKRNVDKAEMVELESGDVLIFGGESRHIFHGVSSIIPKSTPKF 425
Query: 440 LLENTMLRPGRLNLTFRQY 458
LL +T LRPGRLNLTFR+Y
Sbjct: 426 LLHHTGLRPGRLNLTFRKY 444
>gi|449510843|ref|XP_004163780.1| PREDICTED: uncharacterized LOC101210053 [Cucumis sativus]
Length = 444
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/259 (68%), Positives = 203/259 (78%), Gaps = 10/259 (3%)
Query: 205 PFDICLS-----RRRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRIC 259
PFDICL + RN + KE TV R +LRPGMVLLKHY+T REQI IV+ C
Sbjct: 191 PFDICLPGGGNVKHRNIYVVKEG---GTVKDYR--LLRPGMVLLKHYITPREQINIVKTC 245
Query: 260 QELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQL 319
Q LG GPGGFYQPGY DGAKLRLRMMCLGLDWDPQTR+Y KR VDG +P IP +F L
Sbjct: 246 QNLGIGPGGFYQPGYKDGAKLRLRMMCLGLDWDPQTRRYENKRVVDGNKPPDIPPQFTFL 305
Query: 320 VQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKG 379
V+R++ +AHA IK + +SNVE+ILP++SPDICI NFY T GRLGLHQDRDES+ SL G
Sbjct: 306 VKRALKDAHAFIKNNCNISNVEEILPSMSPDICIANFYTTRGRLGLHQDRDESKESLWTG 365
Query: 380 LPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGA 439
LPVVSFSVG++AEFLYGD+R+ +KAE V LESGDVLIFGGESRH+FHGVSSI P S P
Sbjct: 366 LPVVSFSVGNTAEFLYGDKRNVDKAEMVELESGDVLIFGGESRHIFHGVSSIIPKSTPKF 425
Query: 440 LLENTMLRPGRLNLTFRQY 458
LL +T LRPGRLNLTFR+Y
Sbjct: 426 LLHHTGLRPGRLNLTFRKY 444
>gi|225439617|ref|XP_002267882.1| PREDICTED: uncharacterized protein LOC100246527 isoform 1 [Vitis
vinifera]
Length = 456
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 170/296 (57%), Positives = 217/296 (73%), Gaps = 4/296 (1%)
Query: 166 FNKEMKHAHANASPYKRNYFKHELDAKKWDSSHRLHNVEPFDICLS----RRRNFRMEKE 221
F K+ H+ + Y +H++ + L EPFDIC S + + ++
Sbjct: 160 FGKKSTPPHSRKPQRGQPYHRHDVGTGNSECPRGLQKFEPFDICKSGVMHPVKKCLIPEQ 219
Query: 222 NECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLR 281
NE + +++ T + +LRPGMVLLK Y+++ EQI +V+ C++LG GPGGFY+PGY DGAKLR
Sbjct: 220 NEIKHSMEGTTQEVLRPGMVLLKGYISLTEQIKMVKKCRDLGVGPGGFYRPGYQDGAKLR 279
Query: 282 LRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
L+MMCLG++WDPQTRKY K +DG E IP EF LV+R++ ++ +LIK +S +NVE
Sbjct: 280 LQMMCLGMNWDPQTRKYEKWHPLDGSETPDIPHEFSVLVERAIQDSQSLIKKNSGENNVE 339
Query: 342 DILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDA 401
D LP +SP+ICIVNFY TSGRLGLHQDRDES SL KGLPVVSFS+GDSAEFLYG++R+
Sbjct: 340 DTLPRMSPNICIVNFYTTSGRLGLHQDRDESEESLLKGLPVVSFSLGDSAEFLYGNQRNV 399
Query: 402 NKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ A KV+LESGDVLIFGG SRH+FHGVSSI PNSAP +LLE T L PGRLNLT RQ
Sbjct: 400 DAAGKVVLESGDVLIFGGPSRHIFHGVSSIIPNSAPNSLLEETNLLPGRLNLTLRQ 455
>gi|297735575|emb|CBI18069.3| unnamed protein product [Vitis vinifera]
Length = 554
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 170/296 (57%), Positives = 217/296 (73%), Gaps = 4/296 (1%)
Query: 166 FNKEMKHAHANASPYKRNYFKHELDAKKWDSSHRLHNVEPFDICLS----RRRNFRMEKE 221
F K+ H+ + Y +H++ + L EPFDIC S + + ++
Sbjct: 258 FGKKSTPPHSRKPQRGQPYHRHDVGTGNSECPRGLQKFEPFDICKSGVMHPVKKCLIPEQ 317
Query: 222 NECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLR 281
NE + +++ T + +LRPGMVLLK Y+++ EQI +V+ C++LG GPGGFY+PGY DGAKLR
Sbjct: 318 NEIKHSMEGTTQEVLRPGMVLLKGYISLTEQIKMVKKCRDLGVGPGGFYRPGYQDGAKLR 377
Query: 282 LRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
L+MMCLG++WDPQTRKY K +DG E IP EF LV+R++ ++ +LIK +S +NVE
Sbjct: 378 LQMMCLGMNWDPQTRKYEKWHPLDGSETPDIPHEFSVLVERAIQDSQSLIKKNSGENNVE 437
Query: 342 DILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDA 401
D LP +SP+ICIVNFY TSGRLGLHQDRDES SL KGLPVVSFS+GDSAEFLYG++R+
Sbjct: 438 DTLPRMSPNICIVNFYTTSGRLGLHQDRDESEESLLKGLPVVSFSLGDSAEFLYGNQRNV 497
Query: 402 NKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ A KV+LESGDVLIFGG SRH+FHGVSSI PNSAP +LLE T L PGRLNLT RQ
Sbjct: 498 DAAGKVVLESGDVLIFGGPSRHIFHGVSSIIPNSAPNSLLEETNLLPGRLNLTLRQ 553
>gi|357470119|ref|XP_003605344.1| Alpha-ketoglutarate-dependent dioxygenase alkB-like protein
[Medicago truncatula]
gi|355506399|gb|AES87541.1| Alpha-ketoglutarate-dependent dioxygenase alkB-like protein
[Medicago truncatula]
Length = 437
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/279 (62%), Positives = 209/279 (74%), Gaps = 21/279 (7%)
Query: 194 WDSSHRLHNVEPFDIC--------------LSRRRNFRMEKENECRQTVDWTREGILRPG 239
+++SHR N FDIC L + ++ +E E + T T + ILRPG
Sbjct: 166 YNNSHRKIN---FDICFRGIRNSGLTGATPLEKNKDSCIEFEMQDGGTNKETNDVILRPG 222
Query: 240 MVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYG 299
MVLLKH+LT EQ+ IV+ C++LG GPGGFYQPGY DGAK RL+MMCLG+DWDPQTRKYG
Sbjct: 223 MVLLKHHLTHEEQVEIVKKCRDLGLGPGGFYQPGYGDGAKFRLKMMCLGMDWDPQTRKYG 282
Query: 300 KKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNT 359
KR++DG +P IP F +LV RS+ EA LI +S VE ILP+++PDICIVNFY T
Sbjct: 283 YKREIDGSKPPSIPHYFSKLVIRSIQEARNLINQES----VEHILPSITPDICIVNFYLT 338
Query: 360 SGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGG 419
+GRLGLHQDRDESR SL+KGLPVVSFS+GDSAEFLY D+R+ KAE VLLESGDVLIFGG
Sbjct: 339 NGRLGLHQDRDESRESLQKGLPVVSFSIGDSAEFLYSDQRNVEKAENVLLESGDVLIFGG 398
Query: 420 ESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQY 458
ESRHV+HGVSSI NSAP L+++T L PGRLNLTFRQY
Sbjct: 399 ESRHVYHGVSSIIQNSAPDELVQDTCLCPGRLNLTFRQY 437
>gi|224140571|ref|XP_002323656.1| predicted protein [Populus trichocarpa]
gi|222868286|gb|EEF05417.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 155/226 (68%), Positives = 188/226 (83%), Gaps = 7/226 (3%)
Query: 233 EGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWD 292
+G+LRPGMVLLK Y+++ +QI +V+ C+E+G GPGGFY+PGY +GAKLRL+MMCLGL+WD
Sbjct: 18 QGVLRPGMVLLKRYISLGDQIEMVKTCREIGLGPGGFYRPGYKNGAKLRLQMMCLGLNWD 77
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
P+TRKY + DGC+P IP EF QLV+ ++ +AH L+ D +LP +SPDIC
Sbjct: 78 PETRKYEDRSPADGCKPPCIPREFNQLVETAIQDAHGLLGKDY-------MLPTMSPDIC 130
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
IVNFY T+GRLGLHQDRDES SL KGLPVVSFSVGDSAEFLYGD+RD NKA+KV+LESG
Sbjct: 131 IVNFYTTNGRLGLHQDRDESSESLDKGLPVVSFSVGDSAEFLYGDQRDVNKADKVVLESG 190
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQY 458
DVLIFGG+SRH+FHGV+S+ PNSAP AL+E T LRPGRLNLTFRQY
Sbjct: 191 DVLIFGGKSRHIFHGVTSVIPNSAPKALIEETRLRPGRLNLTFRQY 236
>gi|359481179|ref|XP_003632586.1| PREDICTED: uncharacterized protein LOC100246527 isoform 2 [Vitis
vinifera]
Length = 482
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 170/322 (52%), Positives = 217/322 (67%), Gaps = 30/322 (9%)
Query: 166 FNKEMKHAHANASPYKRNYFKHELDAKKWDSSHRLHNVEPFDICLS----RRRNFRMEKE 221
F K+ H+ + Y +H++ + L EPFDIC S + + ++
Sbjct: 160 FGKKSTPPHSRKPQRGQPYHRHDVGTGNSECPRGLQKFEPFDICKSGVMHPVKKCLIPEQ 219
Query: 222 NECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLR 281
NE + +++ T + +LRPGMVLLK Y+++ EQI +V+ C++LG GPGGFY+PGY DGAKLR
Sbjct: 220 NEIKHSMEGTTQEVLRPGMVLLKGYISLTEQIKMVKKCRDLGVGPGGFYRPGYQDGAKLR 279
Query: 282 LRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
L+MMCLG++WDPQTRKY K +DG E IP EF LV+R++ ++ +LIK +S +NVE
Sbjct: 280 LQMMCLGMNWDPQTRKYEKWHPLDGSETPDIPHEFSVLVERAIQDSQSLIKKNSGENNVE 339
Query: 342 DILPALSPDICIVNFYNTSGRLGLHQ--------------------------DRDESRYS 375
D LP +SP+ICIVNFY TSGRLGLHQ DRDES S
Sbjct: 340 DTLPRMSPNICIVNFYTTSGRLGLHQVCPSQVYPSSSYQQNSNYFTFKSLFTDRDESEES 399
Query: 376 LKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNS 435
L KGLPVVSFS+GDSAEFLYG++R+ + A KV+LESGDVLIFGG SRH+FHGVSSI PNS
Sbjct: 400 LLKGLPVVSFSLGDSAEFLYGNQRNVDAAGKVVLESGDVLIFGGPSRHIFHGVSSIIPNS 459
Query: 436 APGALLENTMLRPGRLNLTFRQ 457
AP +LLE T L PGRLNLT RQ
Sbjct: 460 APNSLLEETNLLPGRLNLTLRQ 481
>gi|255576587|ref|XP_002529184.1| conserved hypothetical protein [Ricinus communis]
gi|223531362|gb|EEF33198.1| conserved hypothetical protein [Ricinus communis]
Length = 465
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/298 (54%), Positives = 210/298 (70%), Gaps = 13/298 (4%)
Query: 172 HAHANASPYKRNYFKHELDAKKWDSSHRLHNVEPFDICLSRRRNFRM----------EKE 221
H+ A + ++ K SS +EPFDICL + R F + K
Sbjct: 170 HSGAKDQSLQEHFSKRTEPTGDSGSSENQPVIEPFDICLPKNRPFVVLKSTLFDINRGKR 229
Query: 222 NECRQTVDWTREG-ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKL 280
NE + + ++G IL PGMVLLK +L+I +Q+ IV C+ LG GPGGFYQPGY GAKL
Sbjct: 230 NEIKHASE--KQGKILEPGMVLLKGFLSIDDQVRIVNKCRNLGLGPGGFYQPGYRGGAKL 287
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
RL+MMCLG +WDP T Y + R +DG +IP EF +LV+++M ++ AL + ++K ++
Sbjct: 288 RLKMMCLGRNWDPDTSSYEELRSIDGAAAPIIPDEFCELVKKAMKDSIALSQRNNKATSA 347
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
EDILP ++PDIC+VNFY+TSGRLGLHQD+DES SL+KGLPVVSFS+GD+ EFLYGD RD
Sbjct: 348 EDILPGMTPDICVVNFYSTSGRLGLHQDKDESEGSLRKGLPVVSFSIGDAGEFLYGDTRD 407
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQY 458
A+KVLLESGDVLIFGG+SRH+FHGV S++ N+AP +LLE + LR GRLNLTFRQY
Sbjct: 408 EKDAKKVLLESGDVLIFGGKSRHIFHGVRSVHINTAPKSLLEESDLRAGRLNLTFRQY 465
>gi|224070999|ref|XP_002303323.1| predicted protein [Populus trichocarpa]
gi|222840755|gb|EEE78302.1| predicted protein [Populus trichocarpa]
Length = 322
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 154/266 (57%), Positives = 195/266 (73%), Gaps = 10/266 (3%)
Query: 203 VEPFDICLSRRRNF----------RMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQ 252
VEPFDICL + EK N+ R+ D ILR GMVLLK+YL++ +Q
Sbjct: 57 VEPFDICLPKTGTTLKLKPSLLVKNREKRNDVRRAADGVNGRILRSGMVLLKNYLSLHDQ 116
Query: 253 ILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVI 312
I I+++C+++G GPGGFYQP Y DG ++ L+MM LG WDP KY + R VDG + +
Sbjct: 117 IKIIKLCRDIGLGPGGFYQPVYRDGGRMHLKMMSLGRSWDPDRGKYLEHRPVDGAKAPIF 176
Query: 313 PSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDES 372
PS+F LV+R++ ++ ALI+++ K + EDILP LSP+IC+VNFY+ SGRLGLHQD+DES
Sbjct: 177 PSDFHPLVERAIKDSRALIEINCKSTAAEDILPPLSPNICVVNFYSESGRLGLHQDKDES 236
Query: 373 RYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSIN 432
SL+ GLPVVSFS+GD EFLYGD+RD KAEKV LESGDVLIFGG SRH+FHGVSS+
Sbjct: 237 PESLRTGLPVVSFSIGDIGEFLYGDQRDVEKAEKVKLESGDVLIFGGMSRHIFHGVSSVQ 296
Query: 433 PNSAPGALLENTMLRPGRLNLTFRQY 458
P +AP ALL+ T LRPGRLNLTFR+Y
Sbjct: 297 PKTAPAALLDETNLRPGRLNLTFREY 322
>gi|449461715|ref|XP_004148587.1| PREDICTED: uncharacterized protein LOC101205291 [Cucumis sativus]
gi|449516744|ref|XP_004165406.1| PREDICTED: uncharacterized protein LOC101224716 [Cucumis sativus]
Length = 502
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 148/266 (55%), Positives = 196/266 (73%), Gaps = 9/266 (3%)
Query: 202 NVEPFDICLSRRRNFRM---------EKENECRQTVDWTREGILRPGMVLLKHYLTIREQ 252
+++ FDIC + + EK NE R+ ++ +LRPGMV LK +++R+Q
Sbjct: 237 DLDSFDICPPKTGGVMLNPSLLAMNREKRNEMRRAMEGNNGIVLRPGMVHLKGGISVRDQ 296
Query: 253 ILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVI 312
IV+ C++LG G GGFYQPGY +G KL L+MMCLG +WDP + YG R D +P +
Sbjct: 297 AKIVKKCRDLGIGAGGFYQPGYREGGKLHLKMMCLGKNWDPDSSTYGDIRPFDDTKPPNL 356
Query: 313 PSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDES 372
P EF QLV++++ +++A++ DS + N E +LP + PDICIVNFY+ +GRLGLHQDRDES
Sbjct: 357 PDEFYQLVEKAIKDSYAIMAEDSTIKNPERVLPWMKPDICIVNFYSQNGRLGLHQDRDES 416
Query: 373 RYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSIN 432
+ SL KGLPV+SFS+GDSAEFL+GD D ++AEKV LESGD+LIFGG+SRHVFHGV++I+
Sbjct: 417 QESLDKGLPVISFSIGDSAEFLFGDRSDVDQAEKVTLESGDILIFGGKSRHVFHGVTAIH 476
Query: 433 PNSAPGALLENTMLRPGRLNLTFRQY 458
N+AP ALLE T LRPGRLNLTFRQY
Sbjct: 477 SNTAPKALLEATNLRPGRLNLTFRQY 502
>gi|225442044|ref|XP_002269640.1| PREDICTED: uncharacterized protein LOC100263508 [Vitis vinifera]
gi|297742962|emb|CBI35829.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 157/294 (53%), Positives = 201/294 (68%), Gaps = 19/294 (6%)
Query: 180 YKRNYFKHELDAKKWDSSHRLHNVEPFDIC--------------LSRRRNFRMEKENECR 225
+++N + + S VEPFDIC LS+ R EK E +
Sbjct: 168 FEKNSLSKTIGTGNIELSEHPGVVEPFDICPVKTGTSIVLKAPLLSKNR----EKRRESK 223
Query: 226 QTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM 285
+ + + ++R GMVLLK Y++ +Q+ IV+ CQELG G GGFYQPGY DG KL L+MM
Sbjct: 224 RAEEGLKGDVIRSGMVLLKGYISSSDQVKIVKKCQELGLGSGGFYQPGYRDGGKLNLQMM 283
Query: 286 CLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALI-KMDSKVSNVEDIL 344
CLG +WDP+T KY +R VD +P IP EF LV+ ++ ++ AL+ K + S VE L
Sbjct: 284 CLGKNWDPETGKYEDERPVDNAKPPPIPDEFFHLVKEAIQDSQALLSKEKIEASKVEKEL 343
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P + PDICIVNFY TSGRLGLHQDRDE+ +L+KGLPVVSFS+GDSA+FLY ++RD A
Sbjct: 344 PWMIPDICIVNFYTTSGRLGLHQDRDETEETLRKGLPVVSFSIGDSAKFLYSNQRDVFNA 403
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQY 458
++VLLESGDVLIFGGESR +FHGV+SI PN++P LL+ T LRPGRLNLTFRQY
Sbjct: 404 DEVLLESGDVLIFGGESRRIFHGVASILPNTSPQVLLKETNLRPGRLNLTFRQY 457
>gi|240255344|ref|NP_566479.5| 2-oxoglutarate-dependent dioxygenase family protein [Arabidopsis
thaliana]
gi|9294641|dbj|BAB02980.1| unnamed protein product [Arabidopsis thaliana]
gi|332641958|gb|AEE75479.1| 2-oxoglutarate-dependent dioxygenase family protein [Arabidopsis
thaliana]
Length = 455
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 140/224 (62%), Positives = 178/224 (79%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++RPGMVLLK+YL+I +Q++IV C+ LG G GGFYQPGY D AKL L+MMCLG +WDP+
Sbjct: 232 VIRPGMVLLKNYLSINDQVMIVNKCRRLGLGEGGFYQPGYRDEAKLHLKMMCLGKNWDPE 291
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
T +YG+ R DG IP+EF Q V++++ E+ +L +SK + D +P + PDICIV
Sbjct: 292 TSRYGETRPFDGSTAPRIPAEFNQFVEKAVKESQSLAASNSKQTKGGDEIPFMLPDICIV 351
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
NFY+++GRLGLHQD+DES S++KGLPVVSFS+GDSAEFLYGD+RD +KAE + LESGDV
Sbjct: 352 NFYSSTGRLGLHQDKDESENSIRKGLPVVSFSIGDSAEFLYGDQRDEDKAETLTLESGDV 411
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQY 458
L+FGG SR VFHGV SI ++AP ALL+ T LRPGRLNLTFRQY
Sbjct: 412 LLFGGRSRKVFHGVRSIRKDTAPKALLQETSLRPGRLNLTFRQY 455
>gi|24030229|gb|AAN41292.1| unknown protein [Arabidopsis thaliana]
Length = 313
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 140/224 (62%), Positives = 178/224 (79%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++RPGMVLLK+YL+I +Q++IV C+ LG G GGFYQPGY D AKL L+MMCLG +WDP+
Sbjct: 90 VIRPGMVLLKNYLSINDQVMIVNKCRRLGLGEGGFYQPGYRDEAKLHLKMMCLGKNWDPE 149
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
T +YG+ R DG IP+EF Q V++++ E+ +L +SK + D +P + PDICIV
Sbjct: 150 TSRYGETRPFDGSTAPRIPAEFNQFVEKAVKESQSLAASNSKQTKGGDEIPFMLPDICIV 209
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
NFY+++GRLGLHQD+DES S++KGLPVVSFS+GDSAEFLYGD+RD +KAE + LESGDV
Sbjct: 210 NFYSSTGRLGLHQDKDESENSIRKGLPVVSFSIGDSAEFLYGDQRDEDKAETLTLESGDV 269
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQY 458
L+FGG SR VFHGV SI ++AP ALL+ T LRPGRLNLTFRQY
Sbjct: 270 LLFGGRSRKVFHGVRSIRKDTAPKALLQETSLRPGRLNLTFRQY 313
>gi|226507824|ref|NP_001141140.1| hypothetical protein [Zea mays]
gi|194702846|gb|ACF85507.1| unknown [Zea mays]
gi|413932645|gb|AFW67196.1| hypothetical protein ZEAMMB73_974323 [Zea mays]
Length = 345
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/267 (54%), Positives = 187/267 (70%), Gaps = 16/267 (5%)
Query: 205 PFDICLSRRRNF-------------RMEKENECRQTVDWTREGILRPGMVLLKHYLTIRE 251
PFDIC+S + R +++ EC + V R LRPGMVLLK ++ +
Sbjct: 82 PFDICMSGNKCAVKLKPSIFETNRERKQRDRECSKDV---RPLQLRPGMVLLKRFIKPND 138
Query: 252 QILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSV 311
Q+ IV++C +LG GPGGFY+PGY +GA L+L MMCLG +WDP + YG +R DG +P
Sbjct: 139 QVKIVKLCSQLGVGPGGFYRPGYRNGALLKLWMMCLGKNWDPDSSSYGDRRLFDGAQPPT 198
Query: 312 IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDE 371
IP EF++ VQ + +H +K +NV +PA+SPDICIVNFYN+SGRLGLHQD+DE
Sbjct: 199 IPEEFQKFVQDGIQASHEFLKQQKGATNVVQEIPAMSPDICIVNFYNSSGRLGLHQDKDE 258
Query: 372 SRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
S+ SL KGLPVVSFS+G++AEF++GD RD K KV LESGDVLIFGGESR +FHGV++
Sbjct: 259 SQSSLDKGLPVVSFSIGETAEFMFGDVRDEEKISKVDLESGDVLIFGGESRLIFHGVNNT 318
Query: 432 NPNSAPGALLENTMLRPGRLNLTFRQY 458
P +AP L + T LRPGRLNLTFRQY
Sbjct: 319 KPKTAPKWLTDETSLRPGRLNLTFRQY 345
>gi|23397329|gb|AAK44006.2|AF370191_1 unknown protein [Arabidopsis thaliana]
Length = 253
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 140/224 (62%), Positives = 178/224 (79%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++RPGMVLLK+YL+I +Q++IV C+ LG G GGFYQPGY D AKL L+MMCLG +WDP+
Sbjct: 30 VIRPGMVLLKNYLSINDQVMIVNKCRRLGLGEGGFYQPGYRDEAKLHLKMMCLGKNWDPE 89
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
T +YG+ R DG IP+EF Q V++++ E+ +L +SK + D +P + PDICIV
Sbjct: 90 TSRYGETRPFDGSTAPRIPAEFNQFVEKAVKESQSLAASNSKQTKGGDEIPFMLPDICIV 149
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
NFY+++GRLGLHQD+DES S++KGLPVVSFS+GDSAEFLYGD+RD +KAE + LESGDV
Sbjct: 150 NFYSSTGRLGLHQDKDESENSIRKGLPVVSFSIGDSAEFLYGDQRDEDKAETLTLESGDV 209
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQY 458
L+FGG SR VFHGV SI ++AP ALL+ T LRPGRLNLTFRQY
Sbjct: 210 LLFGGRSRKVFHGVRSIRKDTAPKALLQETSLRPGRLNLTFRQY 253
>gi|297829976|ref|XP_002882870.1| hypothetical protein ARALYDRAFT_478829 [Arabidopsis lyrata subsp.
lyrata]
gi|297328710|gb|EFH59129.1| hypothetical protein ARALYDRAFT_478829 [Arabidopsis lyrata subsp.
lyrata]
Length = 311
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 139/225 (61%), Positives = 179/225 (79%), Gaps = 1/225 (0%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++RPGMVLLK+YL+I +Q++IV C++L G GGFYQPGY D KL L+MMCLG +WDP+
Sbjct: 87 VIRPGMVLLKNYLSINDQVMIVNKCRQLCLGEGGFYQPGYRDETKLHLKMMCLGKNWDPE 146
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKM-DSKVSNVEDILPALSPDICI 353
T +YG+ R +DG P IP+EF Q V++++ E+ +L +SK + ED +P + PDICI
Sbjct: 147 TSRYGEIRPIDGSTPPKIPAEFNQFVEKAVKESQSLAASSNSKETKGEDGIPFMLPDICI 206
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGD 413
VNFY ++GRLGLHQD+DES S++KGLPVVSFS+GDSAEFLYGD+RD +KAE ++LESGD
Sbjct: 207 VNFYTSTGRLGLHQDKDESENSIRKGLPVVSFSIGDSAEFLYGDQRDEDKAETLILESGD 266
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQY 458
VLIFGG SR VFHGV SI ++AP L++ T LRPGRLNLTFRQY
Sbjct: 267 VLIFGGRSRKVFHGVRSIRKDTAPKPLVQETSLRPGRLNLTFRQY 311
>gi|242037635|ref|XP_002466212.1| hypothetical protein SORBIDRAFT_01g003600 [Sorghum bicolor]
gi|241920066|gb|EER93210.1| hypothetical protein SORBIDRAFT_01g003600 [Sorghum bicolor]
Length = 381
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/266 (54%), Positives = 185/266 (69%), Gaps = 15/266 (5%)
Query: 205 PFDICLSR------------RRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQ 252
P DIC+S N ++ EC + V + LRPGMVLLK ++ +Q
Sbjct: 119 PLDICMSASTCAVKLKPSILETNREKRRDRECSKDVAPLQ---LRPGMVLLKRFIKPNDQ 175
Query: 253 ILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVI 312
+ IV++C++LG GPGGFY+PGY +GA LRL MMCLG +WDP + YG +R DG +P I
Sbjct: 176 VKIVKLCRQLGVGPGGFYRPGYRNGAMLRLWMMCLGKNWDPNSYSYGDRRPFDGAQPPTI 235
Query: 313 PSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDES 372
P EFK+ VQ + ++ +K +N +PA+SPDIC+VNFYN+SGRLGLHQD+DES
Sbjct: 236 PEEFKKFVQDVIQASNEFLKQQKGAANAVQEIPAMSPDICLVNFYNSSGRLGLHQDKDES 295
Query: 373 RYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSIN 432
+ SL KGLPVVSFS+G++AEFLYGD RD K KV LESGDVLIFGG+SR +FHGVS+
Sbjct: 296 KSSLDKGLPVVSFSIGETAEFLYGDVRDQEKLSKVDLESGDVLIFGGQSRLIFHGVSTTK 355
Query: 433 PNSAPGALLENTMLRPGRLNLTFRQY 458
P +AP L++ T LRPGRLNLTFRQY
Sbjct: 356 PKTAPKWLMDETNLRPGRLNLTFRQY 381
>gi|334187371|ref|NP_001190202.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
gi|332003008|gb|AED90391.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
Length = 442
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 152/270 (56%), Positives = 195/270 (72%), Gaps = 9/270 (3%)
Query: 196 SSHRLHNVEPFDICLS--RRRNFRME----KENECRQTVDWT-REGILRPGMVLLKHYLT 248
S R+ + PFDIC S R + ++ + R+TV+ + + ++RPGMVLLK +LT
Sbjct: 175 SPQRIKDPPPFDICSSVLERNDTSIKDWILADETNRETVEVSNKHKVIRPGMVLLKDFLT 234
Query: 249 IREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCE 308
Q+ IV+ C+ELG P GFYQPGY+ G+KL L+MMCLG +WDPQT KY K +D
Sbjct: 235 PDIQVDIVKTCRELGVKPTGFYQPGYSVGSKLHLQMMCLGRNWDPQT-KYRKNTDIDSKA 293
Query: 309 PSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQD 368
P IP F LV++++ EAHALI +S + E ILP +SPDICIVNFY+ +GRLGLHQD
Sbjct: 294 PE-IPVTFNVLVEKAIREAHALIDRESGTEDAERILPVMSPDICIVNFYSETGRLGLHQD 352
Query: 369 RDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGV 428
RDES S+ +GLP+VSFS+GDSAEFLYG++RD +A+ V+LESGDVLIFGGESR +FHGV
Sbjct: 353 RDESEESIARGLPIVSFSIGDSAEFLYGEKRDVEEAQGVILESGDVLIFGGESRMIFHGV 412
Query: 429 SSINPNSAPGALLENTMLRPGRLNLTFRQY 458
SI PNSAP +LL + LR GRLNLTFR +
Sbjct: 413 KSIIPNSAPMSLLNESKLRTGRLNLTFRHF 442
>gi|7329651|emb|CAB82748.1| putative protein [Arabidopsis thaliana]
Length = 449
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 152/270 (56%), Positives = 195/270 (72%), Gaps = 9/270 (3%)
Query: 196 SSHRLHNVEPFDICLS--RRRNFRME----KENECRQTVDWT-REGILRPGMVLLKHYLT 248
S R+ + PFDIC S R + ++ + R+TV+ + + ++RPGMVLLK +LT
Sbjct: 182 SPQRIKDPPPFDICSSVLERNDTSIKDWILADETNRETVEVSNKHKVIRPGMVLLKDFLT 241
Query: 249 IREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCE 308
Q+ IV+ C+ELG P GFYQPGY+ G+KL L+MMCLG +WDPQT KY K +D
Sbjct: 242 PDIQVDIVKTCRELGVKPTGFYQPGYSVGSKLHLQMMCLGRNWDPQT-KYRKNTDIDSKA 300
Query: 309 PSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQD 368
P IP F LV++++ EAHALI +S + E ILP +SPDICIVNFY+ +GRLGLHQD
Sbjct: 301 PE-IPVTFNVLVEKAIREAHALIDRESGTEDAERILPVMSPDICIVNFYSETGRLGLHQD 359
Query: 369 RDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGV 428
RDES S+ +GLP+VSFS+GDSAEFLYG++RD +A+ V+LESGDVLIFGGESR +FHGV
Sbjct: 360 RDESEESIARGLPIVSFSIGDSAEFLYGEKRDVEEAQGVILESGDVLIFGGESRMIFHGV 419
Query: 429 SSINPNSAPGALLENTMLRPGRLNLTFRQY 458
SI PNSAP +LL + LR GRLNLTFR +
Sbjct: 420 KSIIPNSAPMSLLNESKLRTGRLNLTFRHF 449
>gi|186519239|ref|NP_195798.2| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
gi|332003007|gb|AED90390.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
Length = 387
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 152/270 (56%), Positives = 195/270 (72%), Gaps = 9/270 (3%)
Query: 196 SSHRLHNVEPFDICLS--RRRNFRME----KENECRQTVDWT-REGILRPGMVLLKHYLT 248
S R+ + PFDIC S R + ++ + R+TV+ + + ++RPGMVLLK +LT
Sbjct: 120 SPQRIKDPPPFDICSSVLERNDTSIKDWILADETNRETVEVSNKHKVIRPGMVLLKDFLT 179
Query: 249 IREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCE 308
Q+ IV+ C+ELG P GFYQPGY+ G+KL L+MMCLG +WDPQT KY K +D
Sbjct: 180 PDIQVDIVKTCRELGVKPTGFYQPGYSVGSKLHLQMMCLGRNWDPQT-KYRKNTDIDSKA 238
Query: 309 PSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQD 368
P IP F LV++++ EAHALI +S + E ILP +SPDICIVNFY+ +GRLGLHQD
Sbjct: 239 PE-IPVTFNVLVEKAIREAHALIDRESGTEDAERILPVMSPDICIVNFYSETGRLGLHQD 297
Query: 369 RDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGV 428
RDES S+ +GLP+VSFS+GDSAEFLYG++RD +A+ V+LESGDVLIFGGESR +FHGV
Sbjct: 298 RDESEESIARGLPIVSFSIGDSAEFLYGEKRDVEEAQGVILESGDVLIFGGESRMIFHGV 357
Query: 429 SSINPNSAPGALLENTMLRPGRLNLTFRQY 458
SI PNSAP +LL + LR GRLNLTFR +
Sbjct: 358 KSIIPNSAPMSLLNESKLRTGRLNLTFRHF 387
>gi|147807459|emb|CAN70743.1| hypothetical protein VITISV_010007 [Vitis vinifera]
Length = 209
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 143/206 (69%), Positives = 170/206 (82%)
Query: 252 QILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSV 311
QI +V+ C++LG GPGGFY+PGY DGAKLRL+MMCLG++WDPQTRKY K +DG E
Sbjct: 3 QIKMVKKCRDLGVGPGGFYRPGYQDGAKLRLQMMCLGMNWDPQTRKYEKWHPLDGSETPD 62
Query: 312 IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDE 371
IP EF LV+R++ ++ +LIK +S +NVED LP +SP+ICIVNFY TSGRLGLHQDRDE
Sbjct: 63 IPHEFSVLVERAIQDSQSLIKKNSGENNVEDTLPRMSPNICIVNFYTTSGRLGLHQDRDE 122
Query: 372 SRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
S SL KGLPVVSFS+GDSAEFLYG++R+ + A KV+LESGDVLIFGG SRH+FHGVSSI
Sbjct: 123 SXESLLKGLPVVSFSLGDSAEFLYGNQRNVDAAGKVVLESGDVLIFGGPSRHIFHGVSSI 182
Query: 432 NPNSAPGALLENTMLRPGRLNLTFRQ 457
PNSAP +LLE T L PGRLNLT RQ
Sbjct: 183 IPNSAPNSLLEETNLLPGRLNLTLRQ 208
>gi|357114937|ref|XP_003559250.1| PREDICTED: uncharacterized protein LOC100841984 [Brachypodium
distachyon]
Length = 391
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/257 (57%), Positives = 181/257 (70%), Gaps = 6/257 (2%)
Query: 202 NVEPFDICLSRRRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQE 261
NV+P + ++R + E+ N Q LRPGMVLLK++L +QI I+ +C+E
Sbjct: 141 NVKPSLLEINREKRRAKERSNSVAQLQH------LRPGMVLLKNFLKPDDQIEIINLCRE 194
Query: 262 LGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQ 321
+G G GGFY PGY DGAKL LRMMCLG DW+P + YG R DG EP IP +FK+LVQ
Sbjct: 195 VGVGKGGFYTPGYRDGAKLSLRMMCLGKDWNPDSSSYGDVRAFDGAEPPEIPEKFKELVQ 254
Query: 322 RSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLP 381
++ +H +K SN LP +SPDICIVNFY + GRLGLHQD+DES+ SL KGLP
Sbjct: 255 GAIGASHEFLKGRKGTSNPSVELPPMSPDICIVNFYTSRGRLGLHQDKDESQDSLTKGLP 314
Query: 382 VVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALL 441
VVSFS+GD+AEFLYGD RD KA KV LE+GDVLIFGGESR +FHGVS I P +AP L
Sbjct: 315 VVSFSLGDTAEFLYGDSRDDTKASKVDLETGDVLIFGGESRRIFHGVSQIKPKTAPKWLT 374
Query: 442 ENTMLRPGRLNLTFRQY 458
+ + L+PGRLNLTFR+Y
Sbjct: 375 DKSNLQPGRLNLTFRKY 391
>gi|115456185|ref|NP_001051693.1| Os03g0816500 [Oryza sativa Japonica Group]
gi|28875999|gb|AAO60008.1| unknown protein [Oryza sativa Japonica Group]
gi|113550164|dbj|BAF13607.1| Os03g0816500 [Oryza sativa Japonica Group]
Length = 513
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/269 (52%), Positives = 182/269 (67%), Gaps = 18/269 (6%)
Query: 205 PFDICLSR---------------RRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTI 249
PFDIC+ R R R E+E ++ LRPGMVLLK +L
Sbjct: 248 PFDICIKRDDKCSIKLSRSLLEINREKRREREQLSKEAAPLQ---YLRPGMVLLKKFLKH 304
Query: 250 REQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEP 309
+Q+ I+R CQ+LG G GGFY PGY DG KL L+MMCLG +WDP +R YG R DG +P
Sbjct: 305 DDQVDIIRRCQKLGIGSGGFYTPGYRDGGKLSLQMMCLGKNWDPNSRSYGDTRPFDGAQP 364
Query: 310 SVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDR 369
IP F ++V+ ++ ++ ++ ++ +N + LP LSPDIC+VNFY +SG+LGLHQD+
Sbjct: 365 PSIPEVFSKIVKDAIQASNEFLRQKARPANDVEELPPLSPDICLVNFYTSSGKLGLHQDK 424
Query: 370 DESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVS 429
DE++ SL KGLPVVSFS+GD+AEFLYGD D +KA KV LESGDVLIFGG+SR +FHGVS
Sbjct: 425 DETKPSLHKGLPVVSFSLGDTAEFLYGDVNDVDKASKVDLESGDVLIFGGKSRLIFHGVS 484
Query: 430 SINPNSAPGALLENTMLRPGRLNLTFRQY 458
I P +AP L + LRPGRLNLTFRQ+
Sbjct: 485 RIKPKTAPNWLTDEAKLRPGRLNLTFRQH 513
>gi|108711754|gb|ABF99549.1| oxidoreductase, 2OG-Fe oxygenase family protein, putative,
expressed [Oryza sativa Japonica Group]
gi|125588388|gb|EAZ29052.1| hypothetical protein OsJ_13105 [Oryza sativa Japonica Group]
Length = 371
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/269 (52%), Positives = 182/269 (67%), Gaps = 18/269 (6%)
Query: 205 PFDICLSR---------------RRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTI 249
PFDIC+ R R R E+E ++ LRPGMVLLK +L
Sbjct: 106 PFDICIKRDDKCSIKLSRSLLEINREKRREREQLSKEAAPLQ---YLRPGMVLLKKFLKH 162
Query: 250 REQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEP 309
+Q+ I+R CQ+LG G GGFY PGY DG KL L+MMCLG +WDP +R YG R DG +P
Sbjct: 163 DDQVDIIRRCQKLGIGSGGFYTPGYRDGGKLSLQMMCLGKNWDPNSRSYGDTRPFDGAQP 222
Query: 310 SVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDR 369
IP F ++V+ ++ ++ ++ ++ +N + LP LSPDIC+VNFY +SG+LGLHQD+
Sbjct: 223 PSIPEVFSKIVKDAIQASNEFLRQKARPANDVEELPPLSPDICLVNFYTSSGKLGLHQDK 282
Query: 370 DESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVS 429
DE++ SL KGLPVVSFS+GD+AEFLYGD D +KA KV LESGDVLIFGG+SR +FHGVS
Sbjct: 283 DETKPSLHKGLPVVSFSLGDTAEFLYGDVNDVDKASKVDLESGDVLIFGGKSRLIFHGVS 342
Query: 430 SINPNSAPGALLENTMLRPGRLNLTFRQY 458
I P +AP L + LRPGRLNLTFRQ+
Sbjct: 343 RIKPKTAPNWLTDEAKLRPGRLNLTFRQH 371
>gi|218193984|gb|EEC76411.1| hypothetical protein OsI_14065 [Oryza sativa Indica Group]
Length = 369
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/269 (51%), Positives = 180/269 (66%), Gaps = 18/269 (6%)
Query: 205 PFDICLSR---------------RRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTI 249
PFDIC+ R R R E+E ++ LRPGMVLLK +L
Sbjct: 104 PFDICIKRDDKCSIKLSRSLLEINREKRREREQLSKEAAPLQ---YLRPGMVLLKKFLKH 160
Query: 250 REQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEP 309
+Q+ I+R CQ+LG G GGFY PGY D KL L+MMCLG +WDP +R YG R DG +P
Sbjct: 161 DDQVDIIRRCQKLGIGSGGFYTPGYRDSGKLSLQMMCLGKNWDPNSRSYGDTRPFDGAQP 220
Query: 310 SVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDR 369
IP F ++V+ ++ ++ ++ ++ +N + LP LSPDIC+VNFY +SG+L LH+D+
Sbjct: 221 PSIPEVFSKIVKDAIQASNEFLRQKARPANDVEELPPLSPDICLVNFYTSSGKLALHRDK 280
Query: 370 DESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVS 429
DE++ SL KGLPVVSFS+GD+AEFLYGD D +KA KV LESGDVLIFGG+SR +FHGVS
Sbjct: 281 DETKPSLHKGLPVVSFSLGDTAEFLYGDVNDVDKASKVDLESGDVLIFGGKSRLIFHGVS 340
Query: 430 SINPNSAPGALLENTMLRPGRLNLTFRQY 458
I P +AP L + LRPGRLNLTFRQ+
Sbjct: 341 RIKPKTAPNWLTDEAKLRPGRLNLTFRQH 369
>gi|356573293|ref|XP_003554797.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase AlkB homolog
[Glycine max]
Length = 311
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/262 (53%), Positives = 188/262 (71%), Gaps = 23/262 (8%)
Query: 206 FDICLSRR------RNFRMEKENECRQTVDWTREGI---LRPGMVLLKHYLTIREQILIV 256
FDIC ++ + K E RQ+ + +R + LRPGMV LK YL++ +Q +IV
Sbjct: 64 FDICPPKQAGSVVLKPPLFLKNREKRQSSN-SRSNVVVSLRPGMVFLKGYLSLSDQEMIV 122
Query: 257 RICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEF 316
+ C+ELG G GGFYQPGY + K+ L+MMCLG +WDPQ+ +YG +R DG +P IP EF
Sbjct: 123 KRCRELGVGSGGFYQPGYGEDTKMHLKMMCLGKNWDPQSGQYGDRRPFDGAKPPQIPPEF 182
Query: 317 KQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSL 376
V ++ +++AL LP++SPDICIVNFY+ +GRLGLHQD+DES SL
Sbjct: 183 HSHVHSALKDSNAL-------------LPSISPDICIVNFYSQTGRLGLHQDKDESPDSL 229
Query: 377 KKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSA 436
+ GLPV+SFS+GDSA+FLY D RD ++ +K+LL+SGDVLIFGG SR++FHGV+SI+PN+A
Sbjct: 230 RLGLPVISFSIGDSADFLYADHRDLDQPQKLLLQSGDVLIFGGPSRNIFHGVASIHPNTA 289
Query: 437 PGALLENTMLRPGRLNLTFRQY 458
P LL++T LRPGRLNLTFR+Y
Sbjct: 290 PNLLLQHTNLRPGRLNLTFRRY 311
>gi|227202818|dbj|BAH56882.1| AT5G01780 [Arabidopsis thaliana]
Length = 217
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 137/219 (62%), Positives = 168/219 (76%), Gaps = 2/219 (0%)
Query: 240 MVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYG 299
MVLLK +LT Q+ IV+ C+ELG P GFYQPGY+ G+KL L+MMCLG +WDPQT KY
Sbjct: 1 MVLLKDFLTPDIQVDIVKTCRELGVKPTGFYQPGYSVGSKLHLQMMCLGRNWDPQT-KYR 59
Query: 300 KKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNT 359
K +D P IP F LV++++ EAHALI +S + E ILP +SPDICIVNFY+
Sbjct: 60 KNTDIDSKAPE-IPVTFNVLVEKAIREAHALIDRESGTEDAERILPVMSPDICIVNFYSE 118
Query: 360 SGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGG 419
+GRLGLHQDRDES S+ +GLP+VSFS+GDSAEFLYG++RD +A+ V+LESGDVLIFGG
Sbjct: 119 TGRLGLHQDRDESEESIARGLPIVSFSIGDSAEFLYGEKRDVEEAQGVILESGDVLIFGG 178
Query: 420 ESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQY 458
ESR +FHGV SI PNSAP +LL + LR GRLNLTFR +
Sbjct: 179 ESRMIFHGVKSIIPNSAPMSLLNESKLRTGRLNLTFRHF 217
>gi|358249036|ref|NP_001239982.1| uncharacterized protein LOC100775999 [Glycine max]
gi|255646130|gb|ACU23551.1| unknown [Glycine max]
Length = 311
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/262 (52%), Positives = 185/262 (70%), Gaps = 23/262 (8%)
Query: 206 FDICLSRR------RNFRMEKENECRQTVDWTREGI---LRPGMVLLKHYLTIREQILIV 256
FDIC ++ + + K E RQ+ + +R + LRPGMV LK YL++ +Q +IV
Sbjct: 64 FDICPPKQAGSVVLKPPLLLKNREKRQSSN-SRSNVVVSLRPGMVFLKGYLSLSDQEMIV 122
Query: 257 RICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEF 316
+ C+ELG G GGFYQ GY + K+ L+MMCL +WDPQ +YG +R DG +P IP EF
Sbjct: 123 KRCRELGVGSGGFYQHGYGEDTKMHLKMMCLEKNWDPQFGQYGDRRPFDGAKPPQIPPEF 182
Query: 317 KQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSL 376
V ++ +++AL LP++SPDICIVNFY+ +GRLGLHQD+DES SL
Sbjct: 183 HSHVHSALKDSNAL-------------LPSISPDICIVNFYSETGRLGLHQDKDESPDSL 229
Query: 377 KKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSA 436
+ GLPV+SFS+GDSA+FLY D RD ++ +K+LL+SGDVLIFGG SR++FHGV+SI+PN+A
Sbjct: 230 RLGLPVISFSIGDSADFLYADHRDLDQPKKLLLQSGDVLIFGGPSRNLFHGVASIHPNTA 289
Query: 437 PGALLENTMLRPGRLNLTFRQY 458
P LL++T L PGRLNLTFR+Y
Sbjct: 290 PNLLLQHTNLCPGRLNLTFRRY 311
>gi|297806029|ref|XP_002870898.1| hypothetical protein ARALYDRAFT_907969 [Arabidopsis lyrata subsp.
lyrata]
gi|297316735|gb|EFH47157.1| hypothetical protein ARALYDRAFT_907969 [Arabidopsis lyrata subsp.
lyrata]
Length = 390
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 136/271 (50%), Positives = 172/271 (63%), Gaps = 24/271 (8%)
Query: 192 KKWDSSHRLHNVEPFDICLS----RRRNFRMEKENECRQTVDWTREGILRPGMVLLKHYL 247
K D S + PFDIC S ++ + E + +LRPGMVLLK +L
Sbjct: 140 KSRDQSPKRREDPPFDICSSVLDTSINDWALADETNGETVEVSNKHRVLRPGMVLLKGFL 199
Query: 248 TIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGC 307
+ Q+ IV+ C+ELG P GFYQPGY G+KL L+MMCLG +WDPQT KYG+ +D
Sbjct: 200 SHDIQVDIVKTCRELGVKPAGFYQPGYRVGSKLHLQMMCLGRNWDPQT-KYGENTDID-S 257
Query: 308 EPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
+ + IP F LV+ ++ EAHALI +S + E ILP +SPDICIVNFY+ +GRLGLHQ
Sbjct: 258 KAADIPVAFSVLVEEAIREAHALIDRESGTEDAERILPVMSPDICIVNFYSETGRLGLHQ 317
Query: 368 DRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHG 427
DRDES+ S+ KGLP+VSFSVGDSAEFLYG++RD +A+ V HG
Sbjct: 318 DRDESQESIVKGLPIVSFSVGDSAEFLYGEKRDVEEAQGV------------------HG 359
Query: 428 VSSINPNSAPGALLENTMLRPGRLNLTFRQY 458
V SI PNSAP +LL + LR GRLNLTFR +
Sbjct: 360 VKSIIPNSAPMSLLNESNLRTGRLNLTFRHF 390
>gi|334185340|ref|NP_188030.2| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
gi|332641955|gb|AEE75476.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
Length = 473
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 124/252 (49%), Positives = 170/252 (67%), Gaps = 25/252 (9%)
Query: 205 PFDICLSRR----RNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQ 260
PFDI L ++ + +E E ++ ++RPGMVLLK+YL+I Q++IV C+
Sbjct: 203 PFDIFLKKKVMRLKPSFLELNREKKKAAKGFSGIVIRPGMVLLKNYLSINNQVMIVNKCR 262
Query: 261 ELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLV 320
+LG G GGFYQPG+ DG L L+MMCLG +WD QTR+YG+ R +DG P IP EF QLV
Sbjct: 263 QLGLGEGGFYQPGFQDGGLLHLKMMCLGKNWDCQTRRYGEIRPIDGSVPPRIPVEFSQLV 322
Query: 321 QRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ------------- 367
++++ E+ +L+ +S + D +P L PDIC+VNFY ++G+LGLHQ
Sbjct: 323 EKAIKESKSLVATNSNETKGGDEIPLLLPDICVVNFYTSTGKLGLHQVSVYDKTSFDFLK 382
Query: 368 --------DRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGG 419
D+ ES+ SL+KGLP+VSFS+GDSAEFLYGD++D +KA+ ++LESGDVLIFG
Sbjct: 383 YKGGYLNTDKGESKKSLRKGLPIVSFSIGDSAEFLYGDQKDVDKADTLILESGDVLIFGE 442
Query: 420 ESRHVFHGVSSI 431
SR+VFHGV SI
Sbjct: 443 RSRNVFHGVRSI 454
>gi|168038958|ref|XP_001771966.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676748|gb|EDQ63227.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 253
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 130/236 (55%), Positives = 160/236 (67%), Gaps = 11/236 (4%)
Query: 230 WTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGL 289
W+ + +L PGMVLLK +L+I +Q+ IVR C LG+G GGFYQP + DG +RL+MMCLG
Sbjct: 21 WS-DTVLMPGMVLLKGWLSIDDQVEIVRECSTLGRGYGGFYQPTFADGRHMRLQMMCLGK 79
Query: 290 D-WDPQTRKYGKKRQV-DGCEPSVIPSEFKQLVQRSMSEAHAL------IKMDSKVSNVE 341
WD T Y +RQ D P IP +F LV+RS+ A L +K+ K VE
Sbjct: 80 KHWDATTNSYVPRRQNHDNATPPAIPEKFSDLVKRSLQRAQDLALKAGGLKLGRK--QVE 137
Query: 342 DILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDA 401
LP + P +CIVNFY +G LG+HQD+DES SLK+G PVVSFSVGDS F YG ERD
Sbjct: 138 GELPNMDPTVCIVNFYEQTGALGMHQDKDESAASLKRGSPVVSFSVGDSGIFAYGKERDP 197
Query: 402 NKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
KAEK+ LESGDVLIFGG SR +FHGV SI P SAP L++ T ++ GRLNLTFR+
Sbjct: 198 QKAEKISLESGDVLIFGGPSRMIFHGVESIIPKSAPKELIDKTNIKQGRLNLTFRE 253
>gi|9294639|dbj|BAB02978.1| unnamed protein product [Arabidopsis thaliana]
Length = 330
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/264 (46%), Positives = 170/264 (64%), Gaps = 37/264 (14%)
Query: 205 PFDICLSRR----RNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQ 260
PFDI L ++ + +E E ++ ++RPGMVLLK+YL+I Q++IV C+
Sbjct: 48 PFDIFLKKKVMRLKPSFLELNREKKKAAKGFSGIVIRPGMVLLKNYLSINNQVMIVNKCR 107
Query: 261 ELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLV 320
+LG G GGFYQPG+ DG L L+MMCLG +WD QTR+YG+ R +DG P IP EF QLV
Sbjct: 108 QLGLGEGGFYQPGFQDGGLLHLKMMCLGKNWDCQTRRYGEIRPIDGSVPPRIPVEFSQLV 167
Query: 321 QRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLH-------------- 366
++++ E+ +L+ +S + D +P L PDIC+VNFY ++G+LGLH
Sbjct: 168 EKAIKESKSLVATNSNETKGGDEIPLLLPDICVVNFYTSTGKLGLHQVVTSIQYRKNCSS 227
Query: 367 -------------------QDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
QD+ ES+ SL+KGLP+VSFS+GDSAEFLYGD++D +KA+ +
Sbjct: 228 LYYCSFKFLHHQLIESFMAQDKGESKKSLRKGLPIVSFSIGDSAEFLYGDQKDVDKADTL 287
Query: 408 LLESGDVLIFGGESRHVFHGVSSI 431
+LESGDVLIFG SR+VFHGV SI
Sbjct: 288 ILESGDVLIFGERSRNVFHGVRSI 311
>gi|302838827|ref|XP_002950971.1| hypothetical protein VOLCADRAFT_101962 [Volvox carteri f.
nagariensis]
gi|300263666|gb|EFJ47865.1| hypothetical protein VOLCADRAFT_101962 [Volvox carteri f.
nagariensis]
Length = 250
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 126/224 (56%), Positives = 152/224 (67%), Gaps = 6/224 (2%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG++LLK YLT+ EQI IV +ELG GPGGFY P YN GA+L LRMMC+GL W+P+T
Sbjct: 25 LPPGVILLKGYLTMDEQIRIVLQIRELGVGPGGFYTPSYNTGARLSLRMMCMGLHWEPRT 84
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
KY R DG P IPS +L R + A A + LP L PDIC+
Sbjct: 85 SKYEATRSSYDGATPPPIPSWLVELCGRCLGAASAAAAAAGGIQ-----LPPLRPDICLA 139
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
NFY SGRLG+HQD+DE SL+ GLPVVS S+GD+A+FLYG R+A +A V LESGDV
Sbjct: 140 NFYERSGRLGMHQDKDEMPDSLRAGLPVVSLSLGDAADFLYGRTREAEQASSVRLESGDV 199
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQY 458
L+FGG R +FH VS ++P++AP LL T LRPGRLNLTFRQY
Sbjct: 200 LVFGGPGRMIFHSVSRVHPHTAPRELLAATGLRPGRLNLTFRQY 243
>gi|301110256|ref|XP_002904208.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262096334|gb|EEY54386.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 292
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 138/231 (59%), Gaps = 13/231 (5%)
Query: 231 TREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
T G L PG++++K +LT +EQ +V + +G G GGFY+P Y GAK RL MCLG
Sbjct: 65 TDTGALLPGLLIIKQFLTPQEQQELVDDSRCMGLGEGGFYKPTYASGAKCRLHQMCLGRH 124
Query: 291 WDPQTRKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP 349
W+ +T KY +R D +P +K QRS+ A K+D V ++P
Sbjct: 125 WNVKTEKYEDQRSNYDYAPIRTLPDSWKTYAQRSLDAAK---KIDPLVMGS---CKKMTP 178
Query: 350 DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDER-DANKAEKVL 408
DIC+VNFY +GR G+H D+DES ++ G PV+SFSVG +AEF Y D D ++A ++
Sbjct: 179 DICVVNFYKKAGRNGMHIDKDESDEAMSMGSPVISFSVGCAAEFAYIDHYPDPHEAVPIV 238
Query: 409 -LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQY 458
LESGD L+FGG +R V H ++ + N+ P L +R GRLNLTFR+Y
Sbjct: 239 RLESGDALVFGGPARTVVHALTRVYNNTQPSWL----RMRSGRLNLTFREY 285
>gi|348667603|gb|EGZ07428.1| hypothetical protein PHYSODRAFT_319290 [Phytophthora sojae]
Length = 291
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 140/231 (60%), Gaps = 13/231 (5%)
Query: 231 TREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
T G L PG+V+LK +L+ +EQ +V + +G G GGFY+P Y GAK RL MCLG
Sbjct: 64 TDTGALLPGLVILKGFLSPQEQQELVDDSRRMGMGEGGFYKPTYASGAKCRLHQMCLGRH 123
Query: 291 WDPQTRKYGKKRQV-DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP 349
W+ +T KY ++R D +P +K+ QRS+ A ++D +V ++P
Sbjct: 124 WNVKTEKYEQRRSNHDNAPVPPLPESWKKCAQRSLEAAR---EIDPQVMGT---CKHMTP 177
Query: 350 DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDER-DANKAEKVL 408
DIC+VNFY +GR G+H D+DES ++ G PV+SFS+G +AEF Y D + ++A ++
Sbjct: 178 DICVVNFYKKAGRNGMHVDKDESDEAMSMGSPVISFSIGCAAEFAYIDHYPEPHEAVPIV 237
Query: 409 -LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQY 458
L SGD L+FGG +R V H ++ + N+ P L +R GRLNLTFR+Y
Sbjct: 238 RLGSGDALVFGGPARKVVHALTRVYNNTQPKWL----RMRSGRLNLTFREY 284
>gi|108711753|gb|ABF99548.1| oxidoreductase, 2OG-Fe oxygenase family protein, putative,
expressed [Oryza sativa Japonica Group]
Length = 344
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 114/190 (60%), Gaps = 21/190 (11%)
Query: 205 PFDICLSR---------------RRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTI 249
PFDIC+ R R R E+E ++ LRPGMVLLK +L
Sbjct: 106 PFDICIKRDDKCSIKLSRSLLEINREKRREREQLSKEAAPLQ---YLRPGMVLLKKFLKH 162
Query: 250 REQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEP 309
+Q+ I+R CQ+LG G GGFY PGY DG KL L+MMCLG +WDP +R YG R DG +P
Sbjct: 163 DDQVDIIRRCQKLGIGSGGFYTPGYRDGGKLSLQMMCLGKNWDPNSRSYGDTRPFDGAQP 222
Query: 310 SVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDR 369
IP F ++V+ ++ ++ ++ ++ +N + LP LSPDIC+VNFY +SG+LGLHQ R
Sbjct: 223 PSIPEVFSKIVKDAIQASNEFLRQKARPANDVEELPPLSPDICLVNFYTSSGKLGLHQVR 282
Query: 370 ---DESRYSL 376
+ RY++
Sbjct: 283 KIHNLQRYTI 292
>gi|285808530|gb|ADC36052.1| hypothetical protein [uncultured bacterium 213]
Length = 205
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 122/222 (54%), Gaps = 22/222 (9%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG L L+I EQ + C+ L GP Y P G K+ +RM+CLG W+ QT +
Sbjct: 5 PGAFHLAQCLSIDEQRALADRCRALIDGPVPGYVPTVRGGGKMHVRMLCLGRHWNGQTYR 64
Query: 298 YGKKRQVDGCEPSV-IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNF 356
Y R +P+ +P E + L +R +EA AL D+CI+N+
Sbjct: 65 YEPVRTDFDAQPAPPLPDELRALARRIAAEAGM----------------ALEADLCILNY 108
Query: 357 YNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLI 416
Y+ GR+GLHQD+DES SL G+PVVS S+GD+A FL+G + + E + L SGD +
Sbjct: 109 YDNEGRMGLHQDKDESAASLAAGVPVVSVSIGDTARFLFGGMKRRDPVEVLPLASGDAFV 168
Query: 417 FGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQY 458
FGG +R +HGVS I P ++P AL GR NLTFRQY
Sbjct: 169 FGGPARLRYHGVSRILPGTSPAALGVQ-----GRFNLTFRQY 205
>gi|285808284|gb|ADC35816.1| unknown protein [uncultured bacterium 66]
Length = 210
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 123/224 (54%), Gaps = 22/224 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG + L YLT+ +Q I C +LG GFY P + + M+CLG W+ +T
Sbjct: 8 LAPGAMHLTRYLTLDDQRAIAGTCLDLGAADAGFYTPIVRGEHPMSVCMLCLGRHWNART 67
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
Y R DG +P+EF + +++ + A + +PD CIV
Sbjct: 68 YAYEAVRTDADGRPAPPLPAEFVAIARQAAAAAGFTV----------------TPDTCIV 111
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
N+Y + R+GLHQD+DES S+ +GLPVVSFS+G++A FL G R + + +LLESGD
Sbjct: 112 NWYGAASRMGLHQDKDESPESIAEGLPVVSFSIGNTARFLLGGLRRRDPLQTLLLESGDA 171
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQY 458
+FGG SR +HGV+ I +AP L GRLNLTFR++
Sbjct: 172 FVFGGPSRLRYHGVTRILAGTAPAGLPFE-----GRLNLTFRKF 210
>gi|361068285|gb|AEW08454.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167067|gb|AFG66558.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167069|gb|AFG66559.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167071|gb|AFG66560.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167073|gb|AFG66561.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167075|gb|AFG66562.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167077|gb|AFG66563.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167079|gb|AFG66564.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167081|gb|AFG66565.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167083|gb|AFG66566.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167085|gb|AFG66567.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167087|gb|AFG66568.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167089|gb|AFG66569.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167091|gb|AFG66570.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167093|gb|AFG66571.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
gi|383167095|gb|AFG66572.1| Pinus taeda anonymous locus 2_10316_02 genomic sequence
Length = 76
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/75 (78%), Positives = 67/75 (89%)
Query: 383 VSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLE 442
VSFSVGDSAEFLYG ERD +KAEK+LLESGDVLIFGGESRHVFHG+S +NP+++P L +
Sbjct: 1 VSFSVGDSAEFLYGTERDIDKAEKILLESGDVLIFGGESRHVFHGISHVNPHTSPKWLNQ 60
Query: 443 NTMLRPGRLNLTFRQ 457
T LRPGRLNLTFRQ
Sbjct: 61 ETRLRPGRLNLTFRQ 75
>gi|254391422|ref|ZP_05006625.1| alkylated DNA repair protein [Streptomyces clavuligerus ATCC 27064]
gi|197705112|gb|EDY50924.1| alkylated DNA repair protein [Streptomyces clavuligerus ATCC 27064]
Length = 224
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 110/224 (49%), Gaps = 23/224 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT+ Q +V C+ +GP G + +R +CLG W P
Sbjct: 17 IAPGAVHVPGWLTVERQRRLVDACRGWARGPVPMRHTVLPGGGVMSVRTVCLGWHWQPY- 75
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + V+G P+ +P + ++ AH S A +PD ++
Sbjct: 76 -RYSRTADDVNGARPAPLPGWLAGWGRAAVLAAHGPDGGGS----------AYAPDTALI 124
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE-KVLLESGD 413
NFY+ R+G+HQDR+E + PVVS SVGD F +G+ R + V L SGD
Sbjct: 125 NFYDDGARMGMHQDREE-----RSAAPVVSLSVGDRCVFRFGNTRTRGRPYLDVELASGD 179
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ +FGG SR +HGV + P +A + T +R GRLNLT R+
Sbjct: 180 LFVFGGPSRAAYHGVPKVYPGTA----VPGTGIRSGRLNLTLRE 219
>gi|294814440|ref|ZP_06773083.1| Putative DNA repair protein [Streptomyces clavuligerus ATCC 27064]
gi|326442830|ref|ZP_08217564.1| alkylated DNA repair protein [Streptomyces clavuligerus ATCC 27064]
gi|294327039|gb|EFG08682.1| Putative DNA repair protein [Streptomyces clavuligerus ATCC 27064]
Length = 255
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 110/224 (49%), Gaps = 23/224 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT+ Q +V C+ +GP G + +R +CLG W P
Sbjct: 48 IAPGAVHVPGWLTVERQRRLVDACRGWARGPVPMRHTVLPGGGVMSVRTVCLGWHWQPY- 106
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + V+G P+ +P + ++ AH S A +PD ++
Sbjct: 107 -RYSRTADDVNGARPAPLPGWLAGWGRAAVLAAHGPDGGGS----------AYAPDTALI 155
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE-KVLLESGD 413
NFY+ R+G+HQDR+E + PVVS SVGD F +G+ R + V L SGD
Sbjct: 156 NFYDDGARMGMHQDREE-----RSAAPVVSLSVGDRCVFRFGNTRTRGRPYLDVELASGD 210
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ +FGG SR +HGV + P +A + T +R GRLNLT R+
Sbjct: 211 LFVFGGPSRAAYHGVPKVYPGTA----VPGTGIRSGRLNLTLRE 250
>gi|256831645|ref|YP_003160372.1| 2OG-Fe(II) oxygenase [Jonesia denitrificans DSM 20603]
gi|256685176|gb|ACV08069.1| 2OG-Fe(II) oxygenase [Jonesia denitrificans DSM 20603]
Length = 231
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 114/227 (50%), Gaps = 30/227 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +LTI +Q + R C + GP G + ++ +C+G W P
Sbjct: 15 IAPGAVWLPGWLTIPQQAWLARQCAQWAAGPVPIRSATVR-GHPMSVKTVCVGWHWRP-- 71
Query: 296 RKYGKKRQ---VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R V+G P +L +R +++A + ED A +PD
Sbjct: 72 --YAYSRDAVDVNGQRVVEFPKWMVRLGRRIVADA----------TGDEDRALAYTPDTA 119
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK-VLLES 411
++NFY+ R+G+HQD+DE K PVVS S+GD+ F +G+ + N+ + + L S
Sbjct: 120 LINFYDVQARMGMHQDKDE-----KSLAPVVSLSIGDTCTFRFGNTENRNRPYRDIALAS 174
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAP-GALLENTMLRPGRLNLTFRQ 457
GDV +FGG SR FHGV I+ SAP G +E+ GR N+T R+
Sbjct: 175 GDVFVFGGPSRLAFHGVQKIHAESAPDGCGVEH-----GRWNITMRE 216
>gi|134099909|ref|YP_001105570.1| alkylated DNA repair protein [Saccharopolyspora erythraea NRRL
2338]
gi|291008697|ref|ZP_06566670.1| alkylated DNA repair protein [Saccharopolyspora erythraea NRRL
2338]
gi|133912532|emb|CAM02645.1| alkylated DNA repair protein [Saccharopolyspora erythraea NRRL
2338]
Length = 217
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 112/223 (50%), Gaps = 23/223 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG V + +L +Q ++VR C+E GP G +GA + R +CLG W P
Sbjct: 11 LAPGAVHVPDWLDPGQQRMLVRACREWATGPAGMRAARMPNGAVMSARTVCLGWHWYPYR 70
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPA-LSPDICIV 354
Q DG PS L +R++++A+ +D A PD+ ++
Sbjct: 71 YSRTLDDQ-DGSPVKPFPSWLGDLGRRAVADAYG-----------DDFDAADYRPDVALI 118
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGD 413
N+Y+ S R+GLHQD+DE + PVVS S+GD+ F G+ + N+ V L SGD
Sbjct: 119 NYYDDSARMGLHQDKDE-----RAPDPVVSLSLGDTGMFRLGNTENRNRPWTDVELCSGD 173
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+L+FGG SR +HGV I PG + L GRLN+T R
Sbjct: 174 LLVFGGPSRMAYHGVLRI----LPGTREPDIGLDRGRLNITMR 212
>gi|291447008|ref|ZP_06586398.1| alkylated DNA repair protein [Streptomyces roseosporus NRRL 15998]
gi|291349955|gb|EFE76859.1| alkylated DNA repair protein [Streptomyces roseosporus NRRL 15998]
Length = 219
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +L++ + +V C+ +GP F G + +R +CLG W P
Sbjct: 8 VVAPGAVHVPEWLSVERRAELVTACRRWARGPVPFRHTVLPSGGVMSVRTVCLGWHWQPY 67
Query: 295 TRKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
+Y + V+G + P L + +++EA+ E+ +PD +
Sbjct: 68 --RYARTADDVNGARVAAFPEWLGDLGRAAVAEAY----------GDEEAAREFAPDTAL 115
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESG 412
+NFY+ + R+G+HQD++E + G PVVS S+G F +G+ E V L SG
Sbjct: 116 INFYDDAARMGMHQDKEE-----RSGAPVVSLSIGARCVFRFGNTEGRGQPYTDVELASG 170
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
D+ +FGG SR +HGV + +A A LR GRLNLT R+
Sbjct: 171 DLFVFGGPSRFAYHGVPKVYAGTADPA----AGLRAGRLNLTLRE 211
>gi|291300775|ref|YP_003512053.1| 2OG-Fe(II) oxygenase [Stackebrandtia nassauensis DSM 44728]
gi|290569995|gb|ADD42960.1| 2OG-Fe(II) oxygenase [Stackebrandtia nassauensis DSM 44728]
Length = 213
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 114/223 (51%), Gaps = 26/223 (11%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT Q +V C++ + P G + G + +R +CLGL W P
Sbjct: 11 IAPGAVHVPGWLTRSAQRDLVAACRDWSRPPAGMTRVKTPGGRWMSVRQVCLGLHWTPY- 69
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y + DG P E +L +++ A+ D +PDI ++N
Sbjct: 70 -RY-SRTHTDGSHVKAFPEELARLAVAAVATAY-------------DDPGDYAPDIALIN 114
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGDV 414
+Y+++ R+G+HQD++E PVVS S+GDS F +G+ + NK V LESGD+
Sbjct: 115 YYDSAARMGMHQDKEE-----HCDAPVVSLSLGDSCVFRFGNTENRNKPWTDVTLESGDL 169
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+FGGESR FHGV P + PG + + GRLN+T RQ
Sbjct: 170 FVFGGESRFAFHGV----PKTMPGTGPSDIDMGAGRLNITIRQ 208
>gi|348171937|ref|ZP_08878831.1| alkylated DNA repair protein [Saccharopolyspora spinosa NRRL 18395]
Length = 215
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 111/225 (49%), Gaps = 30/225 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +L + +Q +V C+E + P G G + +R +CLG W P
Sbjct: 12 IAPGAVHLPDWLDLDQQRELVVACREWARSPAGMRSARLPSGGVMSVRTVCLGWHWYP-- 69
Query: 296 RKYGKKRQVDGCEPSVI---PSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R VD + S + P L +R++++A+ + PD+
Sbjct: 70 --YRYSRTVDDGDGSAVTPFPDWLGDLGRRALADAYGHSAHGYR------------PDVA 115
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLES 411
+VNFY+ + R+G+HQDRDE + PVVS S+GD+ F +G+ + N+ V L S
Sbjct: 116 LVNFYDDTARMGMHQDRDE-----QSQEPVVSLSLGDTCVFRFGNTENRNRPWTDVELCS 170
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GDV +FGGESR +HGV + P + + GRLN+T R
Sbjct: 171 GDVFVFGGESRLAYHGVPKTYRGTGP-----DVGMTAGRLNITLR 210
>gi|345001463|ref|YP_004804317.1| 2OG-Fe(II) oxygenase [Streptomyces sp. SirexAA-E]
gi|344317089|gb|AEN11777.1| 2OG-Fe(II) oxygenase [Streptomyces sp. SirexAA-E]
Length = 230
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 27/227 (11%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +L Q +V C+E +GP G + +R +CLG W P
Sbjct: 24 VVAPGAVHVPGWLPEERQRELVEACREWARGPVPLRNTVLPGGGVMSVRTVCLGWHWQPY 83
Query: 295 TRKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPA--LSPDI 351
+Y + V+G + P + +++EA+ ED + A +PD
Sbjct: 84 --RYARTADDVNGARVAPFPEWLAAWGRAAVAEAY------------EDAVAAEAYAPDT 129
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLE 410
+VNFY+ + R+G+HQD++E ++ PVVS S+GD+ F +G+ +D + V L
Sbjct: 130 ALVNFYDGAARMGMHQDKEERSHA-----PVVSLSLGDTCVFRFGNPQDRGRPYTDVELA 184
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGD+ +FGG SR+ FHGV+ + +A A + +R GRLN+T R+
Sbjct: 185 SGDLFVFGGPSRYAFHGVTRVFEGTAGAA----SGMRAGRLNVTLRE 227
>gi|182436704|ref|YP_001824423.1| DNA repair protein [Streptomyces griseus subsp. griseus NBRC 13350]
gi|326777304|ref|ZP_08236569.1| putative DNA repair protein [Streptomyces griseus XylebKG-1]
gi|178465220|dbj|BAG19740.1| putative DNA repair protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326657637|gb|EGE42483.1| putative DNA repair protein [Streptomyces griseus XylebKG-1]
Length = 230
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 23/225 (10%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +L++ + +V C++ GP G + +R +CLG W P
Sbjct: 18 VVAPGAVHVPEWLSVERRAELVAACRQWASGPVPLRHTVLPGGGVMSVRTVCLGWHWQPY 77
Query: 295 TRKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
+Y + V+G + P L + +++EA+ D + + A +PD +
Sbjct: 78 --RYARTADDVNGARVAAFPEWLGDLGRAAVAEAYG----DGEAAE------AFAPDTAL 125
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESG 412
+NFY+ S R+G+HQDR+E + PVVS S+G F +G+ E V L SG
Sbjct: 126 INFYDDSARMGMHQDREE-----RSSAPVVSLSIGARCVFRFGNTEGRGRPYTDVELASG 180
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
D+ +FGG SR FHGV + A A LR GRLNLT R+
Sbjct: 181 DLFVFGGPSRFAFHGVPKVYAGPADPA----AGLRAGRLNLTLRE 221
>gi|365859924|ref|ZP_09399759.1| putative DNA repair protein [Streptomyces sp. W007]
gi|364010661|gb|EHM31566.1| putative DNA repair protein [Streptomyces sp. W007]
Length = 231
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 109/225 (48%), Gaps = 23/225 (10%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +L++ + +V C++ +GP G + +R +CLG W P
Sbjct: 19 VVAPGAVHVPEWLSVERRAELVAACRQWARGPVPLRHTVLPGGGVMSVRTVCLGWHWQPY 78
Query: 295 TRKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
+Y + V+G + P L + +++EA+ E A +PD +
Sbjct: 79 --RYARTADDVNGARVAAFPDWLGDLGRAAVAEAY----------GDEGAAEAFAPDTAL 126
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESG 412
+NFY+ + R+G+HQD++E + PVVS S+G F +G+ E V L SG
Sbjct: 127 INFYDATARMGMHQDKEE-----RSSAPVVSLSIGARCVFRFGNAEGRGRPYTDVELASG 181
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
D+ +FGG SR FHGV + A A LR GRLNLT R+
Sbjct: 182 DLFVFGGPSRFAFHGVPKVYAGPADPA----AGLRAGRLNLTLRE 222
>gi|323449197|gb|EGB05087.1| hypothetical protein AURANDRAFT_66742 [Aureococcus anophagefferens]
Length = 1793
Score = 114 bits (285), Expect = 9e-23, Method: Composition-based stats.
Identities = 81/222 (36%), Positives = 110/222 (49%), Gaps = 27/222 (12%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG VL++ +L+ R Q +V L P Y DGA+ + +M CLG WD
Sbjct: 1593 PGCVLVRGFLSPRRQRELVDALAALDLK---LEAPVYADGARGKCKMACLGEKWDHVHSL 1649
Query: 298 YGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPAL-SPDICIVNF 356
Y + + + LPA +PD+C+VNF
Sbjct: 1650 YAGAGAAPIPAALAAAARDAHAACAAADAS----------------LPAFDAPDVCLVNF 1693
Query: 357 YNTSG-RLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVL 415
Y+ G R+GLH+D E +L++G PVVS S+G SA F RD +A +V L SGDVL
Sbjct: 1694 YDHGGDRMGLHRDDSEEASALERGSPVVSISLGASATFATAATRDGPRA-RVTLRSGDVL 1752
Query: 416 IFGGESRHVFHGVSSIN-PNSAPGALLENTMLRPGRLNLTFR 456
FGG +R +FHGV ++ P +AP L +RPGRLNLTFR
Sbjct: 1753 CFGGAARGIFHGVERVDKPKTAPAGL----NMRPGRLNLTFR 1790
>gi|403525117|ref|YP_006660004.1| DNA repair protein [Arthrobacter sp. Rue61a]
gi|403227544|gb|AFR26966.1| putative DNA repair protein [Arthrobacter sp. Rue61a]
Length = 244
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 15/227 (6%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +LT+ +Q IV E +GP G ++ +R +CLG W P
Sbjct: 23 LIAPGAVHVPGWLTLEQQRWIVARFGEWTQGPVPLRAATLPGGHQMSVRTVCLGWHWQPY 82
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHAL----IKMDSKVSNVEDILPALSPD 350
R + V+G P +L ++++ A++ +++D S++ + +PD
Sbjct: 83 -RYTREATDVNGRPVLDFPDWMVRLGRKALEAAYSPGDEGVELDEVTSSLSGLANQYTPD 141
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLL 409
+VNFYN +G+HQD+DE + PVVS S+G++ F +G+ + K V L
Sbjct: 142 AALVNFYNDGAAMGMHQDKDE-----RSSAPVVSLSIGETCVFRFGNTKTRTKPYTDVEL 196
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
SGD+ +FGG +R +HG+ + P +AP + L GR+N+T R
Sbjct: 197 RSGDLFVFGGPARFSYHGIPKVLPGTAP----DGCGLSEGRINITMR 239
>gi|119963370|ref|YP_945851.1| DNA repair protein [Arthrobacter aurescens TC1]
gi|119950229|gb|ABM09140.1| putative DNA repair protein [Arthrobacter aurescens TC1]
Length = 244
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 116/227 (51%), Gaps = 15/227 (6%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG + + +LT+ +Q IV E +GP G ++ +R +CLG W P
Sbjct: 23 LIAPGAIHVPGWLTLEQQRWIVARFGEWTQGPVPLRAATLPGGHQMSVRTVCLGWHWQPY 82
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHAL----IKMDSKVSNVEDILPALSPD 350
R + V+G P +L ++++ A++ +++D S++ + +PD
Sbjct: 83 -RYTREATDVNGRPVLDFPDWMVRLGRKALEAAYSPGDEGVELDEVTSSLSGLANQYTPD 141
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLL 409
+VNFYN +G+HQD+DE + PVVS S+G++ F +G+ + K V L
Sbjct: 142 AALVNFYNDGAAMGMHQDKDE-----RSSAPVVSLSIGETCVFRFGNTKTRTKPYTDVEL 196
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
SGD+ +FGG +R +HG+ + P +AP + L GR+N+T R
Sbjct: 197 RSGDLFVFGGPARFSYHGIPKVLPGTAP----DGCGLSEGRINITMR 239
>gi|297561490|ref|YP_003680464.1| 2OG-Fe(II) oxygenase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296845938|gb|ADH67958.1| 2OG-Fe(II) oxygenase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 236
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 107/236 (45%), Gaps = 37/236 (15%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L EQ +VR C++ +GP G + G + +RM+ LG W P
Sbjct: 15 PGAVHVPGWLGPEEQADLVRRCRDWARGPAGMRRHTMPRGGVMSVRMVSLGWHWSPGPNP 74
Query: 298 YGKKRQV----------------DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
+ ++R DG P L R++ A+
Sbjct: 75 HAERRGPGPSRHRQAYSYARLLPDGTPVQPFPDLLGDLAARAVEAAYG-------APPGP 127
Query: 342 DILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDA 401
D P D+ +VNFY+ R+G+HQDRDE PVVS S+GD+ F +G+
Sbjct: 128 DADPY---DVALVNFYDADARMGMHQDRDE-----LSAEPVVSLSLGDTCVFRFGNTETR 179
Query: 402 NKAEK-VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
N+ V L SGD+ +FGG SR +HGV P +AP AL + GRLN+T R
Sbjct: 180 NRPHTDVELRSGDLFVFGGPSRMAYHGVPRTRPRTAPPALGLD-----GRLNITVR 230
>gi|302532894|ref|ZP_07285236.1| alkylated DNA repair protein AlkB [Streptomyces sp. C]
gi|302441789|gb|EFL13605.1| alkylated DNA repair protein AlkB [Streptomyces sp. C]
Length = 236
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +L R Q ++ C+E + P G G + R +CLGL W P
Sbjct: 31 IAPGAVHLPEWLGPRRQRELLAACREWARPPAGLRTVRTPGGGTMTARQVCLGLHWYP-- 88
Query: 296 RKYGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R DG +P+ +L +R+++ A+ S+ DI
Sbjct: 89 --YAYARTAVDGDGAPVKPMPAWLAELGRRAVTAAYGSPPPPSEAY-----------DIA 135
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK-VLLES 411
+VNFY+ R+G+H+D +E + G PVVS S+GDS F +G+ + + V L S
Sbjct: 136 LVNFYDGDSRMGMHRDAEE-----RSGAPVVSLSLGDSCLFRFGNTASRGRPYRDVELRS 190
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GD+ +FGG SR +HGV + P +AP L GRLN+T R
Sbjct: 191 GDLFVFGGPSRLAYHGVPKVLPGTAPPGLGLT-----GRLNITLR 230
>gi|453053797|gb|EMF01257.1| DNA repair protein [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 215
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L Q ++R C+E + P G +G + +R +CLG W P
Sbjct: 13 VAPGAVHVPGWLDEAAQQRLLRACREWARPPAGLRTVRMPNGGAMSVRTVCLGWHWYP-- 70
Query: 296 RKYGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-DI 351
YG R V DG P L + +++ A+ P P DI
Sbjct: 71 --YGYARTVVDGDGAPVKPFPHWLGALARDAVARAYG-------------TPPGPEPYDI 115
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLE 410
+VNFY+ R+GLH+D DE K PVVS S+GDS F +G+ E V L
Sbjct: 116 ALVNFYDAGARMGLHRDGDE-----KSAAPVVSLSLGDSCVFRFGNTETRTRPWTDVELR 170
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
SGD+ +FGG SR +HGV+ P +AP L GRLN+T R
Sbjct: 171 SGDLFVFGGPSRFAYHGVTRTFPGTAPAGLGLT-----GRLNVTLR 211
>gi|453069025|ref|ZP_21972294.1| alkylated DNA repair protein [Rhodococcus qingshengii BKS 20-40]
gi|452764474|gb|EME22742.1| alkylated DNA repair protein [Rhodococcus qingshengii BKS 20-40]
Length = 218
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 23/224 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG +L+ +L++ +Q +V C+ P G K+ ++ +CLG W P
Sbjct: 12 VAPGAILVPDWLSVEQQRFLVAECRRWATAPVPMRSAVVPGGHKMSVQTVCLGWHWQPY- 70
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
KY + V+G + +P L + +++ A+ D + +PD ++
Sbjct: 71 -KYTRTADDVNGAPVAAVPDWLVDLGRAAVAAAY-----DDPTAGER-----YTPDTALI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGD 413
NFY+ R+G+HQD+DE + PVVS SVG S F +G+ + NK V L SGD
Sbjct: 120 NFYDEGARMGMHQDKDE-----RCDAPVVSLSVGQSCVFRFGNSENRNKPYTDVELYSGD 174
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ +FGGESR +HGV P G+ + L GRLN+T R+
Sbjct: 175 LFVFGGESRFAYHGV----PKVIAGSASPDIGLPSGRLNITLRE 214
>gi|229488753|ref|ZP_04382619.1| alkylated DNA repair protein [Rhodococcus erythropolis SK121]
gi|229324257|gb|EEN90012.1| alkylated DNA repair protein [Rhodococcus erythropolis SK121]
Length = 221
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 110/223 (49%), Gaps = 23/223 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG +L+ +L++ +Q +V C+ P G K+ ++ +CLG W P
Sbjct: 15 VAPGAILVPDWLSVEQQRFLVAECRRWATAPVPMRSAVVPGGHKMSVQTVCLGWHWQPY- 73
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
KY + V+G + +P L + +++ A+ D + +PD ++
Sbjct: 74 -KYTRTADDVNGAPVAAVPDWLVDLGRAAVAAAY-----DDPTAGER-----YTPDTALI 122
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGD 413
NFY+ R+G+HQD+DE + PVVS SVG S F +G+ + NK V L SGD
Sbjct: 123 NFYDEGARMGMHQDKDE-----RCDAPVVSLSVGQSCVFRFGNSENRNKPYTDVELHSGD 177
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ +FGGESR +HGV P G+ + L GRLN+T R
Sbjct: 178 LFVFGGESRFAYHGV----PKVIAGSASPDIGLPSGRLNITLR 216
>gi|440795503|gb|ELR16623.1| oxidoreductase, 2OGFe(II) oxygenase family protein [Acanthamoeba
castellanii str. Neff]
Length = 301
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 114/232 (49%), Gaps = 37/232 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELG-------KGPGGFYQPGYND--GAKLRLRMMC 286
+R G+V+L+++L + Q + IC +G G GFYQ +D +L M
Sbjct: 72 VRDGIVVLRNFLDVETQRWLAEICFSMGDEASGAQTGTTGFYQLKKSDKGNGMFKLNMGT 131
Query: 287 LGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPA 346
G R +D S P F +L + + A V+D +P
Sbjct: 132 RG-------------RMIDST--SSFPPRFAELCVQCLRAAQ----------EVDDTMPD 166
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESR-YSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ P+ ++NFY H+D + + + KG PVVSFS+G S +F Y D ++ + E
Sbjct: 167 MEPNTNLINFYKPDANFKWHKDSENPQLVKVGKGKPVVSFSIGLSCDFGYKDHYESEEHE 226
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V L+SGDV IFGG SR + H V + P++ PG + ++ +R GRLN+TFR+
Sbjct: 227 TVRLDSGDVFIFGGRSRMIVHSVLRVIPHTMPGYMRKH--MREGRLNITFRE 276
>gi|28894458|gb|AAO61205.1| putative DNA repair protein [Streptomyces hygroscopicus]
Length = 226
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 27/225 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT+ +Q +V C+ GP G + +R +C+G W P
Sbjct: 12 VAPGAVHVPSWLTLEQQRELVLACRGWATGPVPIRHTKLPRGGVMSVRTVCIGWHWQP-- 69
Query: 296 RKYGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R D G + P +L +R++ +A+ + E +PD
Sbjct: 70 --YAYTRTADDVNGARVAEFPDWMVELGRRALVDAY----------DDETAGEGYTPDTA 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL-LES 411
++NFY+ +LG+HQD+DE + PVVS ++GDS F +G+ K L L S
Sbjct: 118 LINFYDAQAKLGMHQDKDE-----RSSAPVVSLTIGDSCVFRFGNTETRTKPYTDLELAS 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GD+ +FGG SR+ +H V I P + A T L+ GRLN+T R
Sbjct: 173 GDLFVFGGPSRYAYHAVPRILPGTGDPA----TGLKSGRLNITMR 213
>gi|357392743|ref|YP_004907584.1| putative alpha-ketoglutarate-dependent dioxygenase AlkB
[Kitasatospora setae KM-6054]
gi|311899220|dbj|BAJ31628.1| putative alpha-ketoglutarate-dependent dioxygenase AlkB
[Kitasatospora setae KM-6054]
Length = 237
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 108/225 (48%), Gaps = 27/225 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +LT +Q +V C+ GP G + ++ +CLG W P
Sbjct: 22 IAPGAVHLPGWLTPEQQRSLVTACRGWATGPVPIRHTRLPRGGVMSVQTVCLGWHWKP-- 79
Query: 296 RKYGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R D G + P L +R++++A+ + + + + E PD
Sbjct: 80 --YAYTRTADDVNGRPVTPFPGWLADLGRRAVADAY---QDEERAAGYE-------PDAA 127
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL-LES 411
+VNFY+ RLG+HQD+DE PVVS S+GDS F G+ N+ L L S
Sbjct: 128 LVNFYDAEARLGMHQDKDEKTLD-----PVVSLSIGDSCLFRLGNTEHRNRPWTDLTLAS 182
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GD+L+FGG SR +H V I+P + A T L GRLNLT R
Sbjct: 183 GDLLVFGGPSRLAYHAVPKIHPGTGDPA----TGLAAGRLNLTLR 223
>gi|226188009|dbj|BAH36113.1| putative alkylated DNA repair protein [Rhodococcus erythropolis
PR4]
Length = 221
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 109/223 (48%), Gaps = 23/223 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG +L+ +L++ +Q V C+ P G K+ ++ +CLG W P
Sbjct: 15 VAPGAILVPDWLSVEQQRFWVAECRRWATAPVPMRSAVVPGGHKMSVQTVCLGWHWQPY- 73
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
KY + V+G + +P L + +++ A+ D + +PD ++
Sbjct: 74 -KYTRTADDVNGAPVAAVPDWLVDLGRAAVAAAY-----DDPTAGER-----YTPDTALI 122
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGD 413
NFY+ R+G+HQD+DE + PVVS SVG S F +G+ + NK V L SGD
Sbjct: 123 NFYDEGARMGMHQDKDE-----RCDAPVVSLSVGQSCVFRFGNSENRNKPYTDVELHSGD 177
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ +FGGESR +HGV P G+ + L GRLN+T R
Sbjct: 178 LFVFGGESRFAYHGV----PKVIAGSASPDIGLPSGRLNITLR 216
>gi|302562052|ref|ZP_07314394.1| DNA repair protein [Streptomyces griseoflavus Tu4000]
gi|302479670|gb|EFL42763.1| DNA repair protein [Streptomyces griseoflavus Tu4000]
Length = 219
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 108/226 (47%), Gaps = 31/226 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +L EQ ++R C+ + P G G + R +CLG W P
Sbjct: 16 IAPGAVHLPDWLGAEEQRELLRECRGWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP-- 73
Query: 296 RKYGKKRQV---DGCEPSVIPSEFKQLVQRSMSEA-HALIKMDSKVSNVEDILPALSPDI 351
YG R V DG P+ +L +R++++A A D+ DI
Sbjct: 74 --YGYARTVVDGDGAPVKPFPARLGELGRRAVADALGAPAARDAAY------------DI 119
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLE 410
+VNFY+ R+G+H+D DE + PVVS S+GD+ F +G R + V L
Sbjct: 120 ALVNFYDADARMGMHRDSDE-----QADAPVVSLSLGDTCVFRFGTTRGRTRPWTDVELR 174
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
SGD+ +FGG SR +HGV ++P +AP L GRLN+T R
Sbjct: 175 SGDLFVFGGPSRLAYHGVPRVHPGTAPPELGLT-----GRLNVTLR 215
>gi|168054098|ref|XP_001779470.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669155|gb|EDQ55748.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 697
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 121/280 (43%), Gaps = 61/280 (21%)
Query: 210 LSRRRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGF 269
LS F M E + TV IL+PGMVLL+ +L++ Q R+ E F
Sbjct: 441 LSMLCKFPMTSAMERKSTVT-----ILQPGMVLLRSWLSLDIQ---QRLVNESQSAAHLF 492
Query: 270 YQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHA 329
+P G K L M G WD +TR+Y + G P L + +A
Sbjct: 493 KRPTTASGGKYHLWQMAFGCSWDSKTRRYAAPER--GLR---FPVWMYDLGRELAFDAQK 547
Query: 330 LIKMDSKVSNVEDILPALSPDICIVNFYNTSGR------LGLHQDRDESRYSLKKGLPVV 383
+ ++ SN E PD+ +VNFY LG HQD D+ +PVV
Sbjct: 548 HTPVYAQGSNFE-------PDVALVNFYPAKDEELGVVGLGGHQDLDD-----YCDMPVV 595
Query: 384 SFSVGDSAEFLYG----------------DERDA----------NKAEKVLLESGDVLIF 417
S SVGDS F Y DE A N +K++L SGDVL+F
Sbjct: 596 SVSVGDSMTFFYRRFPPQSRRKSGVQIIVDEYAAQCCKDGDTAHNSEKKIILASGDVLVF 655
Query: 418 GGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GGESR V+HG + P + P L + PGRLN TFRQ
Sbjct: 656 GGESRLVYHGTRCVQPGTRPPGL----HMAPGRLNFTFRQ 691
>gi|409191810|gb|AFV30255.1| 2OG-Fe(II) oxygenase [Streptomyces sp. LZ35]
Length = 226
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 27/225 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT+ +Q +V C+ GP G + +R +C+G W P
Sbjct: 12 VAPGAVHVPGWLTLEQQRELVLACRGWATGPVPIRHTKLPRGGVMSVRTVCIGWHWQP-- 69
Query: 296 RKYGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R D G + P +L +R++ +A+ + E +PD
Sbjct: 70 --YAYTRTADDVNGARVAEFPDWMVELGRRALVDAY----------DDETAGEGYTPDTA 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL-LES 411
++NFY+ +LG+HQD+DE + PVVS ++GDS F +G+ K L L S
Sbjct: 118 LINFYDAQAKLGMHQDKDE-----RSSAPVVSLTIGDSCVFRFGNTETRTKPYTDLELAS 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GD+ +FGG SR+ +H V I P + A T L+ GRLN+T R
Sbjct: 173 GDLFVFGGPSRYAYHAVPRILPGTGDPA----TGLKSGRLNITMR 213
>gi|239989995|ref|ZP_04710659.1| putative DNA repair protein [Streptomyces roseosporus NRRL 11379]
Length = 204
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 23/217 (10%)
Query: 243 LKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKR 302
+ +L++ + +V C+ +GP F G + +R +CLG W P +Y +
Sbjct: 1 MPEWLSVERRAELVTACRRWARGPVPFRHTVLPSGGVMSVRTVCLGWHWQPY--RYARTA 58
Query: 303 Q-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSG 361
V+G + P L + +++EA+ E+ +PD ++NFY+ +
Sbjct: 59 DDVNGARVAAFPEWLGDLGRAAVAEAY----------GDEEAAREFAPDTALINFYDDAA 108
Query: 362 RLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGDVLIFGGE 420
R+G+HQD++E + G PVVS S+G F +G+ E V L SGD+ +FGG
Sbjct: 109 RMGMHQDKEE-----RSGAPVVSLSIGARCVFRFGNTEGRGQPYTDVELASGDLFVFGGP 163
Query: 421 SRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SR +HGV + +A A LR GRLNLT R+
Sbjct: 164 SRFAYHGVPKVYAGTADPA----AGLRAGRLNLTLRE 196
>gi|126348301|emb|CAJ90022.1| putative DNA repair protein [Streptomyces ambofaciens ATCC 23877]
Length = 223
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 105/225 (46%), Gaps = 29/225 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +L Q ++R C+E + P G G + R +CLG W P
Sbjct: 13 IAPGAVHLPDWLDPGRQRDLLRACREWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP-- 70
Query: 296 RKYGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R V DG P +L +R++++A D + DI
Sbjct: 71 --YAYARTVVDGDGAPVKPFPDRLGELGRRAVTDALG-----------ADAVAEAPYDIA 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLES 411
++NFY+ R+G+H+D DE + PVVS S+GD+ F +G+ E V L S
Sbjct: 118 LINFYDADARMGMHRDADE-----RSDAPVVSLSLGDTCVFRFGNPETRTRPYTDVELRS 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GD+ +FGG SR +HGV ++ +AP AL GRLNLT R
Sbjct: 173 GDLFVFGGPSRQAYHGVPRVHAGTAPPALGLT-----GRLNLTLR 212
>gi|345012835|ref|YP_004815189.1| 2OG-Fe(II) oxygenase [Streptomyces violaceusniger Tu 4113]
gi|344039184|gb|AEM84909.1| 2OG-Fe(II) oxygenase [Streptomyces violaceusniger Tu 4113]
Length = 230
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 27/225 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT+ +Q +V C+ GP G + +R +C+G W P
Sbjct: 12 VAPGAVHVPGWLTLEQQRELVIACRGWATGPVPIRHTKLPRGGVMSVRTVCIGWHWQP-- 69
Query: 296 RKYGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R D G + P +L +R++++A+ + E +PD
Sbjct: 70 --YAYTRTADDVNGARVAEFPHWMVELGRRALADAY----------DDETAGEGYAPDTA 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL-LES 411
++NFY+ +LG+HQD+DE + PVVS ++GD F +G+ K L L S
Sbjct: 118 LINFYDAQAKLGMHQDKDE-----RSSAPVVSLTIGDGCVFRFGNTETRTKPYTDLELGS 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GD+ +FGG SR+ +H V I P + A T L+ GRLN+T R
Sbjct: 173 GDLFVFGGPSRYAYHAVPKILPGTGDPA----TGLKSGRLNITMR 213
>gi|386838595|ref|YP_006243653.1| DNA repair protein [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|374098896|gb|AEY87780.1| putative DNA repair protein [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451791886|gb|AGF61935.1| putative DNA repair protein [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 216
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L Q ++ C++ + P G G + R +CLG W P
Sbjct: 15 PGAVHVVDWLDAERQRALLAACRDWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP---- 70
Query: 298 YGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
Y R V DG P L +R++++A D +PA+ DI ++
Sbjct: 71 YAYARTVVDGDGSPVKPFPDWLGALGRRAVADALG-----------PDAVPAVPYDIALI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD-ANKAEKVLLESGD 413
NFY+ R+G+H+D DE K PVVS S+GD+ F +G+ A V L SGD
Sbjct: 120 NFYDGDARMGMHRDGDE-----KTDAPVVSLSLGDTCVFRFGNTGTRAKPYTDVELRSGD 174
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ +FGG SR +HGV + P +AP L GRLN+T R
Sbjct: 175 LFVFGGPSRFAYHGVPRVRPGTAPAWLGLA-----GRLNITLR 212
>gi|302547250|ref|ZP_07299592.1| putative DNA repair protein [Streptomyces hygroscopicus ATCC 53653]
gi|302464868|gb|EFL27961.1| putative DNA repair protein [Streptomyces himastatinicus ATCC
53653]
Length = 219
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +LT+ Q +V C+ GP G + ++ +C+G W P
Sbjct: 12 IAPGAVHLPGWLTLERQRELVTACRAWATGPVPIRHTRLPRGGVMSVQTVCIGWHWQPY- 70
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
KY + V+G + P QL +R++ +A+ D +PD ++
Sbjct: 71 -KYTRNADDVNGERVAAFPDWMVQLGRRALLDAYG------DAQGAAD----YTPDTALI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGD 413
NFY+ +LG+HQD+DE + PVVS S+GD+ F G+ K + L SGD
Sbjct: 120 NFYDGQAKLGMHQDKDE-----RSSAPVVSLSIGDTCVFRVGNTETRTKPYTDIELASGD 174
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ +FGG SR+V+HGV P G +T L GRLN+T R
Sbjct: 175 LFVFGGPSRYVYHGV----PKVYEGTADPDTGLASGRLNITMR 213
>gi|357402536|ref|YP_004914461.1| DNA repair protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386358611|ref|YP_006056857.1| DNA repair protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337768945|emb|CCB77658.1| putative DNA repair protein [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365809119|gb|AEW97335.1| DNA repair protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 216
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 106/226 (46%), Gaps = 33/226 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L EQ ++ C+ + P G +G ++ +R +CLG W P
Sbjct: 13 IAPGAVHVPGWLGPDEQRRLLADCRAWARPPAGLRTVTMPNGGRMSVRSVCLGWHWYP-- 70
Query: 296 RKYGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-DI 351
YG R V DG P+ L +R+++EA+ P P DI
Sbjct: 71 --YGYARTVVDGDGAPVKPFPAPLGDLARRAVTEAYGE--------------PCAEPYDI 114
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLE 410
+VNFY +G+H+D DE + PVVS S+GD+ F +G+ + V L
Sbjct: 115 ALVNFYGEGAAMGMHRDADE-----RSAAPVVSLSLGDACVFRFGNPGTRTRPWTDVELR 169
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
SGD+ +FGG SR +HGV P +AP AL GRLN+T R
Sbjct: 170 SGDLFVFGGPSRLAYHGVPRTRPGTAPPALGLT-----GRLNITLR 210
>gi|374983639|ref|YP_004959134.1| alkylated DNA repair protein [Streptomyces bingchenggensis BCW-1]
gi|297154291|gb|ADI04003.1| alkylated DNA repair protein [Streptomyces bingchenggensis BCW-1]
Length = 208
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 111/213 (52%), Gaps = 20/213 (9%)
Query: 246 YLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQ-V 304
+LT+++Q +V C+ +GP + G + ++ +C+G W P +Y + V
Sbjct: 6 WLTLQQQRELVAACRAWAQGPVPIRRTRLPSGGVMSVQTVCVGWHWLPY--RYSRTADDV 63
Query: 305 DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLG 364
+G + P +L +R+++EA+ + + ++ +PD ++NFY+ +LG
Sbjct: 64 NGARAAEFPGWMVELGRRALAEAYQNKREEMASAD-------YTPDTALINFYDGQAKLG 116
Query: 365 LHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGDVLIFGGESRH 423
+HQD+DE K PVVS S+GD+ F G+ K + L SGD+ +FGG SR+
Sbjct: 117 MHQDKDE-----KSAAPVVSLSIGDTCVFRVGNTATRTKPYTDIELASGDLFVFGGPSRY 171
Query: 424 VFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
V+HGV ++ + A T LR GRLN+ R
Sbjct: 172 VYHGVPKVHEGTGDPA----TGLRTGRLNIAMR 200
>gi|296141226|ref|YP_003648469.1| 2OG-Fe(II) oxygenase [Tsukamurella paurometabola DSM 20162]
gi|296029360|gb|ADG80130.1| 2OG-Fe(II) oxygenase [Tsukamurella paurometabola DSM 20162]
Length = 221
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 22/223 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG L+ +L + Q I+ +E +GP G + ++ +CLG W P
Sbjct: 7 ISPGAQLIPGWLDLDSQAWIIDRFREWARGPVPIRSATVR-GRPMSVQTVCLGWHWQPY- 64
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R + V+ P +L +R +++A + E +PD +VN
Sbjct: 65 RYSRRATDVNDARVLAFPPWLARLGRRVLADA------GYPAAEAE----GYAPDTALVN 114
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE-KVLLESGDV 414
+Y+ R+G+HQDRDE + PVVS S+GD+ F +G+ + N+ V L SGD
Sbjct: 115 YYDDRARMGMHQDRDEVSRA-----PVVSLSIGDACTFRFGNTENRNRPYIDVPLHSGDA 169
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+FGG +R FHGV++++P +AP E L GR+NLT R+
Sbjct: 170 FVFGGPARLAFHGVTAVHPGTAP----EGCGLNHGRVNLTLRE 208
>gi|441170617|ref|ZP_20969307.1| 2OG-Fe(II) oxygenase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440615286|gb|ELQ78487.1| 2OG-Fe(II) oxygenase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 224
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 21/220 (9%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L+ Q +V C+ +GP G + ++ +CLG W P
Sbjct: 20 PGAVHIPGWLSPERQRELVTACRGWARGPVPIRHTRLPRGGVMSVQTVCLGWHWQP---- 75
Query: 298 YGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFY 357
Y KR D + + +EF + R A A D+ +PD ++NFY
Sbjct: 76 YAYKRTADDVNGARV-AEFPDWLVRLGRAALADAYEDATAGE------GYTPDTALINFY 128
Query: 358 NTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGDVLI 416
+ R+G+HQD+DE + PVVS S+GD+ F +G+ N+ + L SGD+ +
Sbjct: 129 DGQARMGMHQDKDE-----RSSAPVVSLSIGDTCVFRFGNTESRNRPYTDIELASGDLFV 183
Query: 417 FGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
FGG SR +HGV+ + P + A T L GRLN+T R
Sbjct: 184 FGGPSRFAYHGVTKVLPGTGDPA----TGLTSGRLNITMR 219
>gi|359147424|ref|ZP_09180731.1| alkylated DNA repair protein [Streptomyces sp. S4]
Length = 219
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 111/223 (49%), Gaps = 25/223 (11%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ--T 295
PG V + +L Q +V C+ +GP + G + ++ + LG W P T
Sbjct: 14 PGAVHVPEWLPEERQRELVEACRGWARGPVPMRRTELPGGGVMSVQSVSLGWHWSPYRYT 73
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R+ G V+G + +P +L +R++++A+ D A PD+ +VN
Sbjct: 74 RRAG---DVNGAPVAPLPEWLVELGRRAVADAY----QDEAAGR------AYRPDVALVN 120
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGDV 414
FY +G+HQD+DE + PVVS SVGD+ F G+ E + + LESGD+
Sbjct: 121 FYGAGATMGMHQDKDE-----RSDAPVVSLSVGDACLFRLGNTEGRGRPWQDLRLESGDL 175
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+FGG SR +HGV + P +A ++ T GRLNLT R+
Sbjct: 176 LVFGGPSRFAYHGVPKVYPGTAEPSVGPAT----GRLNLTLRE 214
>gi|291455551|ref|ZP_06594941.1| alkylated DNA repair protein [Streptomyces albus J1074]
gi|291358500|gb|EFE85402.1| alkylated DNA repair protein [Streptomyces albus J1074]
Length = 219
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 111/223 (49%), Gaps = 25/223 (11%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ--T 295
PG V + +L Q +V C+ +GP + G + ++ + LG W P T
Sbjct: 14 PGAVHVPEWLPEERQRELVEACRGWARGPVPMRRTELPGGGVMSVQSVSLGWHWSPYRYT 73
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R+ G V+G + +P +L +R++++A+ D A PD+ +VN
Sbjct: 74 RRAG---DVNGVPVAPLPEWLVELGRRAVADAY----QDEAAGR------AYRPDVALVN 120
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGDV 414
FY +G+HQD+DE + PVVS SVGD+ F G+ E + + LESGD+
Sbjct: 121 FYGAGATMGMHQDKDE-----RSDAPVVSLSVGDACLFRLGNTEGRGRPWQDLRLESGDL 175
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+FGG SR +HGV + P +A ++ T GRLNLT R+
Sbjct: 176 LVFGGPSRFAYHGVPKVYPGTAEPSVGPAT----GRLNLTLRE 214
>gi|296392708|ref|YP_003657592.1| DNA repair protein [Segniliparus rotundus DSM 44985]
gi|296179855|gb|ADG96761.1| putative DNA repair protein [Segniliparus rotundus DSM 44985]
Length = 224
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 102/222 (45%), Gaps = 22/222 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L G V L +L++ EQ + Q +GP +G ++ +R +CLG W P
Sbjct: 19 LPAGAVHLPGWLSLPEQARLSAEFQMWARGPVPLRAAALPNGGRMSVRTVCLGWHWQPY- 77
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R V+G + P L + + EA + PD +VN
Sbjct: 78 RYTRTADDVNGQQVLPFPDWLGDLAKAVVREACGATAART-----------YRPDAALVN 126
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK-VLLESGDV 414
Y+ R+G+HQD+DE + PVVS SVGDS F +G+ + K V LESGD
Sbjct: 127 HYDAHARMGMHQDKDE-----RTDAPVVSLSVGDSCVFRFGNAQGRGKPHTDVRLESGDA 181
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+FGG SR +HGV I P +AP E L GRLN+T R
Sbjct: 182 FVFGGPSRLAYHGVPKIFPGTAP----EGCGLARGRLNITVR 219
>gi|432341096|ref|ZP_19590480.1| alkylated DNA repair protein [Rhodococcus wratislaviensis IFP 2016]
gi|430773860|gb|ELB89504.1| alkylated DNA repair protein [Rhodococcus wratislaviensis IFP 2016]
Length = 221
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 112/224 (50%), Gaps = 25/224 (11%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +LT EQ +V C+ P G ++ ++ +CLG W P
Sbjct: 14 VVAPGAVHVPDWLTPEEQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWKPY 73
Query: 295 TRKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
+ Y + + G + +P +L +R++SEA+ K ++ +PD +
Sbjct: 74 S--YSRTAEDAGGGRVAPVPGWLVELGRRAVSEAYG------KPAD------GYTPDAAL 119
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESG 412
+NFY+ + ++G+HQD++E + PVVS S+GD+ F +G+ K V L SG
Sbjct: 120 INFYDDTAKMGMHQDKEE-----RSDAPVVSLSIGDTCTFRFGNTATRTKPYTDVELLSG 174
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
D+ +FGGESR +HGV P PG + L GRLN+T R
Sbjct: 175 DLFVFGGESRFAYHGV----PKVFPGTNDPDCGLTTGRLNITLR 214
>gi|411007920|ref|ZP_11384249.1| DNA repair protein [Streptomyces globisporus C-1027]
Length = 198
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 249 IREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQ-VDGC 307
+ ++ +V C++ +GP F G + +R +CLG W P +Y + V+G
Sbjct: 1 MEQRAELVVACRQWARGPVPFRHTLLPGGGVMSVRTVCLGWHWQPY--RYARTADDVNGA 58
Query: 308 EPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
+ P L + +++EA+ ED A +PD ++NFY+ + R+G+HQ
Sbjct: 59 RVAAFPDWLGDLGRAAVAEAY----------GDEDAAQAFAPDTALINFYDDAARMGMHQ 108
Query: 368 DRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGDVLIFGGESRHVFH 426
D++E + PVVS S+G F +G+ E V L SGD+ +FGG SR FH
Sbjct: 109 DKEE-----RSSAPVVSLSIGARCVFRFGNTEGRGQPYTDVELASGDLFVFGGPSRFAFH 163
Query: 427 GVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GV + +A A LR GRLNLT R+
Sbjct: 164 GVPKVYTGTADPA----AGLRAGRLNLTLRE 190
>gi|325672978|ref|ZP_08152672.1| alkylated DNA repair protein [Rhodococcus equi ATCC 33707]
gi|325556231|gb|EGD25899.1| alkylated DNA repair protein [Rhodococcus equi ATCC 33707]
Length = 221
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKY 298
G VL+ +L + EQ +V C++ +GP G + ++ +CLG W P +Y
Sbjct: 15 GAVLVPDWLDLGEQRRLVEACRDWARGPVPMRAARLPTGHAMSVQTVCLGWHWQPY--RY 72
Query: 299 GK-KRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFY 357
+ G +P QL +R++++A+ D + A PD ++NFY
Sbjct: 73 SRIAGDAGGGRVLPVPEWLAQLGRRAVADAY-----DDPAAGA-----AYEPDAALINFY 122
Query: 358 NTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGDVLI 416
+ + R+G+H+D++E + PVVS S+GD+ F +G+ K V L+SGD+ +
Sbjct: 123 DDAARMGMHRDQEE-----RADAPVVSLSIGDTCTFRFGNPDTRTKPYTDVELQSGDLFV 177
Query: 417 FGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
FGG SR +HGV P PG + L GRLN+T R
Sbjct: 178 FGGPSRFAYHGV----PKVFPGTADPDCGLTAGRLNITLR 213
>gi|184201720|ref|YP_001855927.1| putative alkylated DNA repair protein [Kocuria rhizophila DC2201]
gi|183581950|dbj|BAG30421.1| putative alkylated DNA repair protein [Kocuria rhizophila DC2201]
Length = 236
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 21/243 (8%)
Query: 220 KENECRQTVDWTREGI-LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQ--PGYND 276
E E + RE I L PG V + +L + Q +V C++ + +Q PG
Sbjct: 2 AEYEVTELFTVPREPIVLAPGAVHVPDWLPVARQHDLVAACRDWVRSAPMRHQVMPG--- 58
Query: 277 GAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKM-DS 335
G ++ ++ + LG++ P +YG G E + +P L R++++A+ ++ D
Sbjct: 59 GGRMSVQSVMLGVNRTPY--RYGAT---GGAEVAALPDWLVDLGARAVADAYGMVDAGDV 113
Query: 336 KVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLY 395
V VED++ PD +VN+Y+ + +G+HQD+DE + P+VS S+GD+ F +
Sbjct: 114 GVPEVEDVVRGFVPDSALVNYYDGAAHMGMHQDKDEFSAA-----PIVSLSLGDTCTFRF 168
Query: 396 GD-ERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLT 454
G+ E V L SGD+ +FGG SR+ FHGV + P + L + GRLN+T
Sbjct: 169 GNTETRTAPYRDVELRSGDLFVFGGPSRYAFHGVPKVFPGTGG---LHLGLKNGGRLNIT 225
Query: 455 FRQ 457
R
Sbjct: 226 LRM 228
>gi|452958291|gb|EME63644.1| alkylated DNA repair protein [Amycolatopsis decaplanina DSM 44594]
Length = 206
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 115/220 (52%), Gaps = 32/220 (14%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L + EQ +V C +G G+ + +G + +R +CLG W P +
Sbjct: 14 PGAVHVPGWLDLDEQRRLVEAC----RGWRGYRRTRLPNGGVMSVRTVCLGWHWHPY--R 67
Query: 298 YGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFY 357
Y K DG P L +R++S A+ S+ E PDI +VNFY
Sbjct: 68 YSKVTG-DGSPVLPFPGWLGDLGRRAVSSAYG-------SSSYE-------PDIALVNFY 112
Query: 358 NTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGDVLI 416
+++ ++GLHQD+DE+ SL+ PVVS S+GD+ F +G+ D + V L SGD+ +
Sbjct: 113 DSTAKMGLHQDKDEA--SLE---PVVSLSLGDACVFRFGNTSDRGRPYTDVDLRSGDLFV 167
Query: 417 FGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
FGGESR FHGV + P +A + + GRLN+T R
Sbjct: 168 FGGESRLAFHGVPKVLPGTA-----DPELGLVGRLNITLR 202
>gi|376250270|ref|YP_005137151.1| putative DNA repair protein [Corynebacterium diphtheriae HC03]
gi|372111774|gb|AEX77833.1| putative DNA repair protein [Corynebacterium diphtheriae HC03]
Length = 230
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 118/231 (51%), Gaps = 31/231 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGG----FYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + G ++ + G + +M LGL W
Sbjct: 19 LRPGLVHLPRWMGLEQQFAVVQQCREIARSVAGTPLAMHRQQWASG-TMSAYLMSLGLHW 77
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G S IP EF L AH +++ + V+D L A
Sbjct: 78 EYRTYQY--VSQWGGMAVSPIPVEFSAL-------AHEVLR---AAAGVDDSLAAWVDSY 125
Query: 350 --DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EK 406
D +VN+Y +G+HQD E + PVVS S+GDSA F G+ + + +
Sbjct: 126 RIDAALVNYYPPGAGMGMHQDAFEDSRA-----PVVSLSIGDSAVFRAGNGANRQRPWQD 180
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V+L SGD ++FGG SR +FH V ++ +AP + GR+NLTFRQ
Sbjct: 181 VVLGSGDAVVFGGPSRDMFHSVVRLHEGTAP----TRCGVSQGRINLTFRQ 227
>gi|384101021|ref|ZP_10002075.1| alkylated DNA repair protein [Rhodococcus imtechensis RKJ300]
gi|383841580|gb|EID80860.1| alkylated DNA repair protein [Rhodococcus imtechensis RKJ300]
Length = 208
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 29/226 (12%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +LT EQ +V C+ P G ++ ++ +CLG W P
Sbjct: 1 MVAPGAVHVPDWLTPEEQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWKPY 60
Query: 295 TRKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPA--LSPDI 351
+ Y + + G + +P +L +R++SEA+ PA +PD
Sbjct: 61 S--YSRTAEDAGGGRVAPVPGWLVELGRRAVSEAYGQ--------------PADGYTPDA 104
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLE 410
++NFY+ + ++G+HQD++E + PVVS S+GD+ F +G+ K V L
Sbjct: 105 ALINFYDDTAKMGMHQDKEE-----RSDAPVVSLSIGDTCTFRFGNTATRTKPYTDVELL 159
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
SGD+ +FGGESR +HGV P PG + L GRLN+T R
Sbjct: 160 SGDLFVFGGESRFAYHGV----PKVFPGTSDPDCGLTTGRLNITLR 201
>gi|403512625|ref|YP_006644263.1| 2OG-Fe(II) oxygenase superfamily protein [Nocardiopsis alba ATCC
BAA-2165]
gi|402798269|gb|AFR05679.1| 2OG-Fe(II) oxygenase superfamily protein [Nocardiopsis alba ATCC
BAA-2165]
Length = 215
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 103/223 (46%), Gaps = 30/223 (13%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V L L + +I +VR C+E +GP G + G + + M+ LG W R
Sbjct: 15 PGAVHLPGLLPLETRIDLVRRCREWARGPAGMRRHTMPSGGVMSVDMVALGWHW----RP 70
Query: 298 YGKKRQV-DGCEPSVIPSEFKQLVQRSMSEAHA-LIKMDSKVSNVEDILPALSPDICIVN 355
Y R + DG P L RS+ A+ + D+ D+ +VN
Sbjct: 71 YAYSRTLPDGTPVRPFPDLLGALAVRSVEAAYGEPYEGDAH-------------DVALVN 117
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYG-DERDANKAEKVLLESGDV 414
FY+ R+G+HQDRDE + PVVS S+GD+ F +G E V L GDV
Sbjct: 118 FYDADARMGMHQDRDE-----RSPAPVVSISLGDTCVFRFGGTEHRGRPYTDVELRDGDV 172
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+FGG SR +HGV + P +A AL GRLN+T R
Sbjct: 173 FVFGGPSRLAYHGVPRVRPGTADPALGLK-----GRLNITIRA 210
>gi|408680041|ref|YP_006879868.1| Alkylated DNA repair protein AlkB [Streptomyces venezuelae ATCC
10712]
gi|328884370|emb|CCA57609.1| Alkylated DNA repair protein AlkB [Streptomyces venezuelae ATCC
10712]
Length = 207
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 108/223 (48%), Gaps = 32/223 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L Q +V C+E G+GP + Q G + +R +CLG W P
Sbjct: 13 IAPGAVHVPGWLPAARQRELVDACREWGRGPLPYRQTVLPGGGVMSVRSLCLGRRWVPY- 71
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R +D +P L + ++ EA+ D +PD +VN
Sbjct: 72 ------RYLDAVG-VPLPDWLVALGREALVEAYG----DHG---------GFTPDTALVN 111
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGDV 414
FY R+G+HQDR+E + G PVVS S+GD F +G+E + + + V L SGD+
Sbjct: 112 FYAPGARMGMHQDREE-----RSGAPVVSLSLGDRCVFRFGNEENRGRPYQDVELASGDL 166
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+FGG SR V HGV + P +A AL GRLN+T R+
Sbjct: 167 FVFGGASRWVHHGVPKVFPGTADPALGLT-----GRLNITLRE 204
>gi|21219556|ref|NP_625335.1| DNA repair protein [Streptomyces coelicolor A3(2)]
gi|8894829|emb|CAB96025.1| putative DNA repair protein [Streptomyces coelicolor A3(2)]
Length = 216
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 107/223 (47%), Gaps = 29/223 (13%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V L +L+ +Q ++ C+E + P G G + R +CLG W P
Sbjct: 15 PGAVHLPDWLSPGQQRELLDACREWARPPAGLRTVRTPGGGTMTARQVCLGRHWYP---- 70
Query: 298 YGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
YG DG P+ L +R++++A E + PA DI ++
Sbjct: 71 YGYAATAVDGDGAPVKPFPARLDGLARRAVTDA----------LGAEAVAPAPY-DIALI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGD 413
NFY+ R+G+H+D DE + PVVS S+GD+ F +G+ E L SGD
Sbjct: 120 NFYDADARMGMHRDADE-----RTDAPVVSLSLGDTCVFRFGNPETRTRPYTDTELRSGD 174
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ +FGG SR +HGV ++P +AP L LR GRLN+T R
Sbjct: 175 LFVFGGPSRLAYHGVPRVHPGTAPPEL----GLR-GRLNITLR 212
>gi|312141760|ref|YP_004009096.1| alkylated DNA repair protein [Rhodococcus equi 103S]
gi|311891099|emb|CBH50418.1| alkylated DNA repair protein [Rhodococcus equi 103S]
Length = 221
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKY 298
G VL+ +L + EQ +V C++ +GP G + ++ +CLG W P +Y
Sbjct: 15 GAVLVPDWLDLGEQRRLVEACRDWARGPVPMRAARLPTGHAMSVQTVCLGWHWQPY--RY 72
Query: 299 GK-KRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFY 357
+ G +P QL +R++++A+ D + A PD ++NFY
Sbjct: 73 SRIAGDAGGGRVLPVPEWLVQLGRRAVTDAY-----DDPAAGA-----AYEPDAALINFY 122
Query: 358 NTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGDVLI 416
+ + R+G+H+D++E + PVVS S+GD+ F +G+ K V L+SGD+ +
Sbjct: 123 DDAARMGMHRDQEE-----RADAPVVSLSIGDTCTFRFGNPDTRTKPYTDVELQSGDLFV 177
Query: 417 FGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
FGG SR +HGV P PG + L GRLN+T R
Sbjct: 178 FGGPSRFAYHGV----PKVFPGTADPDCGLTAGRLNITLR 213
>gi|358447503|ref|ZP_09158025.1| putative alkylated DNA repair protein [Corynebacterium casei UCMA
3821]
gi|356606603|emb|CCE56392.1| putative alkylated DNA repair protein [Corynebacterium casei UCMA
3821]
Length = 226
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 118/230 (51%), Gaps = 28/230 (12%)
Query: 236 LRPGMVLLKHYL-TIREQILIVRICQE---LGKGPGGFYQPGYNDGAKLRLRMMCLGLDW 291
++PG+ + +L T +Q L+ ++ E + P +P G ++ + M+ LG W
Sbjct: 13 IKPGVAHVPGWLDTPTQQGLVQQLRDEARLMAGTPMAMQKPVLKSGGQMSVFMLNLGHFW 72
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALS--- 348
D QT +Y + P + Q + AH ++ + V+ E++ P +
Sbjct: 73 DHQTYRYVDRMGATNVRP---------VPQNLLDIAHGGLRAAADVA--EELQPWTTNYH 121
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKV 407
PD+ ++NFY +G+HQD E+ ++ P+VS S+GD A F G NK + +
Sbjct: 122 PDMALINFYPPGATMGMHQDAYETTFA-----PIVSLSIGDEAVFRIGSTEHRNKPWDDI 176
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+++FGG +R FHGV P + PG L E+ L+ GR+N+TFRQ
Sbjct: 177 ALLSGDLVVFGGPNRQAFHGV----PETRPGTLDESCGLKEGRINITFRQ 222
>gi|383648514|ref|ZP_09958920.1| alkylated DNA repair protein [Streptomyces chartreusis NRRL 12338]
Length = 213
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 104/225 (46%), Gaps = 36/225 (16%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L Q ++ C+ + P G G + R +CLGL W P
Sbjct: 15 PGAVHMPDWLDAEGQRELLDACRAWARPPAGLRTVRTPGGGTMTARQVCLGLHWYP---- 70
Query: 298 YGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDIL--PALSPDIC 352
YG R V DG P L +R+ V D L PA + DI
Sbjct: 71 YGYARTVVDGDGAPVKPFPEWLGDLGRRA----------------VRDTLGGPAPAYDIA 114
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLES 411
++NFY+ R+G+H+D DE K PVVS S+GD+ F +G+ E V L S
Sbjct: 115 LINFYDADARMGMHRDSDE-----KSDAPVVSLSLGDTCVFRFGNTETRTRPWTDVELRS 169
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GD+ +FGG +R +HGV ++P +AP AL GRLN+T R
Sbjct: 170 GDLFVFGGPARLAYHGVPRVHPGTAPPALGLA-----GRLNITLR 209
>gi|448823052|ref|YP_007416217.1| hypothetical protein CU7111_0378 [Corynebacterium urealyticum DSM
7111]
gi|448276549|gb|AGE35973.1| hypothetical protein CU7111_0378 [Corynebacterium urealyticum DSM
7111]
Length = 226
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 22/227 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIV----RICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDW 291
+ PG+V L +L + +Q +V I +EL P +P G ++++ M+ LG W
Sbjct: 13 ITPGVVHLPGWLELGQQAAVVSQLREIARELAGTPLSMSRPQLKSG-RMQVFMLHLGRMW 71
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
+ Y V G +P ++ +++++ A + D+ +S D PD+
Sbjct: 72 VTEP-TYRYVTHVAGHRVPQVPENLAEIARQALTSAG---RHDATLSAWAD---TFRPDM 124
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLE 410
+VN+Y +G+HQDR+E+ + PVVS S+GD A F G + N+ ++V L
Sbjct: 125 ALVNYYPPGATMGMHQDRNENSLA-----PVVSLSIGDEALFRIGSTKTRNQPWDEVTLI 179
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGDV++FGG R FHGV P + P L + L+ GR+N+TFRQ
Sbjct: 180 SGDVIVFGGPKRLAFHGV----PQTRPETLPDGCGLKEGRINITFRQ 222
>gi|260906339|ref|ZP_05914661.1| 2OG-Fe(II) oxygenase [Brevibacterium linens BL2]
Length = 240
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 115/233 (49%), Gaps = 18/233 (7%)
Query: 232 REGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDW 291
R ++ PG V + +L Q I+R + GP + G + +R + LG W
Sbjct: 13 RPRVIAPGAVWVPGFLDAAAQTWIIRQYAKWQSGPVPAHATSIA-GHPMSVRTIGLGWHW 71
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMD----SKVSNVEDILPA- 346
P R R V+G P +L +R +S A ++ D + N+ LP
Sbjct: 72 QP-GRYDRHARDVNGQRVLSFPDWMTRLGRRVVSHAAEVVADDPDSPADAPNLWGFLPEE 130
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-E 405
SPD+ +VN+Y+ ++G+HQD+DE + PVVS S+GD+ F +G+ + NK E
Sbjct: 131 YSPDVALVNYYDGQAKMGMHQDKDELDPA-----PVVSLSLGDTCIFRFGNTDNRNKPYE 185
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFR 456
+ L SGD +FGG +R FHGV+ I +AP G L L GR+N+T R
Sbjct: 186 DIRLASGDAFVFGGPARFAFHGVTKILDATAPEHGRL---DHLGGGRINITMR 235
>gi|337289746|ref|YP_004628767.1| hypothetical protein CULC22_00130 [Corynebacterium ulcerans
BR-AD22]
gi|334698052|gb|AEG82848.1| hypothetical protein CULC22_00130 [Corynebacterium ulcerans
BR-AD22]
Length = 228
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 114/228 (50%), Gaps = 23/228 (10%)
Query: 235 ILRPGMVLLKHYLTIREQILIV----RICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
++RPG+V L +L++ EQ +V + + L P +Q + G + +M LG
Sbjct: 16 VVRPGIVHLPGFLSLAEQRAMVGKARAVARRLAHTPLAMHQQQWKTGT-MSAHLMSLGKH 74
Query: 291 WDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPD 350
W+ + +Y + Q G + IP F +M +A L + ++ I D
Sbjct: 75 WEYSSHQYVSEWQ--GQKVPAIPDRFLVQAYEAMRQAACLDSSLAPWTSDYRI------D 126
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLL 409
+VN+Y +GLHQD E + PVVS S+G +A F G+ + NK + VLL
Sbjct: 127 AALVNYYPPGSGMGLHQDAFE-----ESSAPVVSLSIGATAVFRAGNSENRNKPWQDVLL 181
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGD L+FGG SR +FHG+ I+ + P +N L GR+N+TFRQ
Sbjct: 182 LSGDALVFGGPSRKIFHGIKRIDAATVP----DNCGLEKGRINMTFRQ 225
>gi|419966199|ref|ZP_14482131.1| alkylated DNA repair protein [Rhodococcus opacus M213]
gi|414568385|gb|EKT79146.1| alkylated DNA repair protein [Rhodococcus opacus M213]
Length = 221
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 25/224 (11%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +LT EQ +V C+ P G ++ ++ +CLG W P
Sbjct: 14 VVAPGAVHVPDWLTPEEQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWKPY 73
Query: 295 TRKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
+ Y + + G + +P +L +R++ EA+ K ++ +PD +
Sbjct: 74 S--YSRTAEDAGGGRVAPVPGWLVELGRRAVCEAYG------KPAD------GYTPDAAL 119
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESG 412
+NFY+ + ++G+HQD++E + PVVS S+GD+ F +G+ K V L SG
Sbjct: 120 INFYDDTAKMGMHQDKEE-----RSDAPVVSLSIGDTCTFRFGNTATRTKPYTDVELLSG 174
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
D+ +FGGESR +HGV P PG + L GRLN+T R
Sbjct: 175 DLFVFGGESRFAYHGV----PKVFPGTSDPDCGLTTGRLNITLR 214
>gi|433457696|ref|ZP_20415676.1| DNA-N1-methyladenine dioxygenase [Arthrobacter crystallopoietes
BAB-32]
gi|432194468|gb|ELK51089.1| DNA-N1-methyladenine dioxygenase [Arthrobacter crystallopoietes
BAB-32]
Length = 222
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 114/223 (51%), Gaps = 24/223 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG V + +LT+ +Q + +E GP G ++ ++ +CLG W P
Sbjct: 17 LAPGAVWVPGWLTLEQQRWLADRFREWAAGPVPIRSAKVR-GHEMSVKTVCLGWHWRPY- 74
Query: 296 RKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y ++ V+G P +L +++++EA D + A +PD +V
Sbjct: 75 -EYTREAVDVNGNRVLDFPDWMVRLGRKALAEATG----DPQAGE------AYTPDTALV 123
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGD 413
N+Y+ R+G+HQD+DE + PVVS S+GD+ F +G+ + NK + + L SGD
Sbjct: 124 NYYDDQARMGMHQDKDERSLA-----PVVSLSIGDTCRFRFGNTENRNKPYQDIDLASGD 178
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ +FGG SR +HGV + P +AP E L GR+N+T R
Sbjct: 179 LFVFGGPSRLAYHGVMKLLPGTAP----EGCGLDRGRINITMR 217
>gi|408827177|ref|ZP_11212067.1| DNA repair protein [Streptomyces somaliensis DSM 40738]
Length = 239
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 106/222 (47%), Gaps = 26/222 (11%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L+ + +V C+E GP + G + +R +CLG W P +
Sbjct: 35 PGAVHMPGWLSPERRRALVEACREWACGPVPIRRTVLPGGGVMSVRTVCLGWHWLPY--R 92
Query: 298 YGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNF 356
Y + V+G + P L + +++ A+ ED PD +VNF
Sbjct: 93 YSRTADDVNGAPVTAFPDRLGALGREAVAAAYG-----------ED--GGYRPDAALVNF 139
Query: 357 YNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGDVL 415
Y+ R+G+HQDR+E + PVVS S+GD+ F +G E V LESGD+
Sbjct: 140 YDGDARMGMHQDREE-----RSTAPVVSLSIGDACLFRFGTAEGRGRPYTDVRLESGDLF 194
Query: 416 IFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+FGG SR +HGV + P + A LR GRLN+T R+
Sbjct: 195 VFGGPSRFAYHGVPKVYPGTGDPA----AGLRAGRLNITLRE 232
>gi|172040062|ref|YP_001799776.1| hypothetical protein cur_0382 [Corynebacterium urealyticum DSM
7109]
gi|171851366|emb|CAQ04342.1| hypothetical protein cu0382 [Corynebacterium urealyticum DSM 7109]
Length = 226
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 116/227 (51%), Gaps = 22/227 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIV----RICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDW 291
+ PG+V L +L + +Q +V I +EL P +P G ++++ M+ LG W
Sbjct: 13 ITPGVVHLPGWLELGQQAAVVSQLREIARELAGTPLSMSRPQLKSG-RMQVFMLHLGRMW 71
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
+ Y V G +P ++ +++++ A + D+ +S D PD+
Sbjct: 72 VTEP-TYRYVTHVAGHRVPQVPENLAEIARQALASA---ARYDAPLSAWAD---TFRPDM 124
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLE 410
+VN+Y +G+HQDR+E+ + PVVS S+GD A F G N+ ++V L
Sbjct: 125 ALVNYYPPGATMGMHQDRNENSLA-----PVVSLSIGDEALFRIGSTETRNQPWDEVTLI 179
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGDV++FGG R FHGV P + P L + L+ GR+N+TFRQ
Sbjct: 180 SGDVIVFGGPKRLAFHGV----PQTRPETLPDGCGLKEGRINITFRQ 222
>gi|300857503|ref|YP_003782486.1| hypothetical protein cpfrc_00086 [Corynebacterium
pseudotuberculosis FRC41]
gi|300684957|gb|ADK27879.1| hypothetical protein cpfrc_00086 [Corynebacterium
pseudotuberculosis FRC41]
Length = 245
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 116/231 (50%), Gaps = 29/231 (12%)
Query: 235 ILRPGMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
++RPG+V L +L+ EQ ++V + L P +Q + G + +M LG
Sbjct: 33 LIRPGIVHLPGFLSFAEQRVMVEKARAVACRLAHTPLAMHQQQWKSGT-MSAHLMSLGKH 91
Query: 291 WDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP- 349
W+ + +Y + Q G E IP+ F + +A + +DS D+ P S
Sbjct: 92 WEYSSHQYVSEWQ--GQEVPDIPNNFLTQAHEAFEQA---VCLDS------DLAPWASDY 140
Query: 350 --DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EK 406
D +VN+Y +G+HQD E + PVVS S+G +A F G+ + NK +
Sbjct: 141 RIDAALVNYYPPGSGMGMHQDVFE-----ESSAPVVSLSIGATAVFRAGNSENRNKPWQD 195
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
VLL SGD L+FGG SR +FHG+ I+ + P +N L GR+N+TFRQ
Sbjct: 196 VLLLSGDALVFGGPSRKIFHGIKHIDDATVP----DNCGLEKGRINITFRQ 242
>gi|271965860|ref|YP_003340056.1| alkylated DNA repair protein [Streptosporangium roseum DSM 43021]
gi|270509035|gb|ACZ87313.1| alkylated DNA repair protein [Streptosporangium roseum DSM 43021]
Length = 213
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 106/223 (47%), Gaps = 35/223 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L+ Q +VR C+ + P G + G + +R +CLG W P
Sbjct: 15 IAPGAVHVPDWLSPARQRQLVRACRAWARPPLGMERIRLPGGGLMSVRTVCLGRRWRPY- 73
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+ + EP +P +L + + + + PD+ +VN
Sbjct: 74 -----RYTDEPVEP--LPQWLAEL---------------GRAAVAQTLGGPYEPDVALVN 111
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD-ANKAEKVLLESGDV 414
FY+ + +G+HQDRDE + PVVS S+GD+ F +G+ A V LESGD+
Sbjct: 112 FYDDAATMGMHQDRDE-----RAAAPVVSLSLGDACVFRFGNTATRARPWSDVRLESGDL 166
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+FGG SR FHGV I P + P L++ GRLN+T RQ
Sbjct: 167 FVFGGPSRLAFHGVRRILPGTGPHDLIQ------GRLNITLRQ 203
>gi|408534096|emb|CCK32270.1| alkylated DNA repair protein AlkB [Streptomyces davawensis JCM
4913]
Length = 213
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 105/227 (46%), Gaps = 36/227 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L Q ++ C+E + P G G + R +CLG W P
Sbjct: 13 IAPGAVHVPDWLDADRQRELLTACREWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP-- 70
Query: 296 RKYGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP--D 350
YG R V DG +P +L +R+ V D L +P D
Sbjct: 71 --YGYARTVVDGDGAPVKPLPDWLGELARRA----------------VRDALGTGTPPYD 112
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLL 409
I ++NFY+ R+G+H+D DE + PVVS S+GD+ F +G+ E A V L
Sbjct: 113 IALINFYDADARMGMHRDSDE-----ESDAPVVSLSLGDTCVFRFGNTETRARPYTDVEL 167
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
SGD+ +FGG SR +HGV ++P + P L GRLN+T R
Sbjct: 168 RSGDLFVFGGASRLAYHGVPRVHPGTGPPELGLA-----GRLNVTLR 209
>gi|375292070|ref|YP_005126609.1| putative DNA repair protein [Corynebacterium diphtheriae INCA 402]
gi|376283642|ref|YP_005156852.1| putative DNA repair protein [Corynebacterium diphtheriae 31A]
gi|371577157|gb|AEX40825.1| putative DNA repair protein [Corynebacterium diphtheriae 31A]
gi|371581741|gb|AEX45407.1| putative DNA repair protein [Corynebacterium diphtheriae INCA 402]
Length = 230
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 117/231 (50%), Gaps = 31/231 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKG----PGGFYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + P ++ + G + +M LGL W
Sbjct: 19 LRPGLVHLPRWMGLEQQFAVVQQCREIARSVAGTPLAMHRQQWASG-TMSAYLMSLGLHW 77
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G IP EF L AH +++ + V+D L A
Sbjct: 78 EYRTYQY--VSQWGGMAVPPIPVEFSAL-------AHEVLR---AAAGVDDSLAAWVDSY 125
Query: 350 --DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EK 406
D +VN+Y +G+HQD E + PVVS S+GDSA F G+ + + +
Sbjct: 126 RIDAALVNYYPPGAGMGMHQDAFEDSRA-----PVVSLSIGDSAVFRAGNGANRQRPWQD 180
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V+L SGD ++FGG SR +FH V ++ +AP + GR+NLTFRQ
Sbjct: 181 VVLGSGDAVVFGGPSRDMFHSVVRLHEGTAP----TRCGVSQGRINLTFRQ 227
>gi|376247465|ref|YP_005139409.1| putative DNA repair protein [Corynebacterium diphtheriae HC04]
gi|376256114|ref|YP_005144005.1| putative DNA repair protein [Corynebacterium diphtheriae VA01]
gi|372114033|gb|AEX80091.1| putative DNA repair protein [Corynebacterium diphtheriae HC04]
gi|372118631|gb|AEX82365.1| putative DNA repair protein [Corynebacterium diphtheriae VA01]
Length = 230
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 118/231 (51%), Gaps = 31/231 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKG----PGGFYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + P ++ + G + +M LGL W
Sbjct: 19 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWASG-TMSAYLMSLGLHW 77
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G IP EF L AH +++ + V+D L A
Sbjct: 78 EYRTYQY--VSQWGGVAVPPIPVEFSAL-------AHEVLR---AAAGVDDSLAAWVDSY 125
Query: 350 --DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EK 406
D +VN+Y +G+HQD E + PVVS S+GDSA F G+ + + +
Sbjct: 126 RIDAALVNYYPLGAGMGMHQDAFEDSRA-----PVVSLSIGDSAVFRAGNGVNRQRPWQD 180
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V+L SGD ++FGG SR +FH V ++ ++AP + GR+NLTFRQ
Sbjct: 181 VVLGSGDAVVFGGPSRDMFHSVVRLHEDTAP----TRCGVSQGRINLTFRQ 227
>gi|443629631|ref|ZP_21113952.1| putative Alkylated DNA repair protein AlkB [Streptomyces
viridochromogenes Tue57]
gi|443336856|gb|ELS51177.1| putative Alkylated DNA repair protein AlkB [Streptomyces
viridochromogenes Tue57]
Length = 217
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L Q ++R C+E + P G G + R +CLG W P
Sbjct: 15 PGAVHVPGWLDAERQRELLRACREWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP---- 70
Query: 298 YGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
Y R V DG P +L +R++ +A VE + A DI ++
Sbjct: 71 YAYARTVVDGDGAPVKPFPGWLGELGRRAVRDALG--------EPVEAAVEAY--DIALI 120
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGD 413
NFY+ R+G+H+D DE K PVVS S+GD+ F +G+ E V L SGD
Sbjct: 121 NFYDADARMGMHRDSDE-----KSPAPVVSLSLGDTCVFRFGNTETRTRPYTDVELRSGD 175
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ +FGG SR HGV + P ++P L GRLN+T R
Sbjct: 176 LFVFGGPSRLAHHGVPRVQPGTSPPELGLT-----GRLNITLR 213
>gi|409357380|ref|ZP_11235761.1| alkylated DNA repair protein [Dietzia alimentaria 72]
Length = 239
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 110/234 (47%), Gaps = 29/234 (12%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELG--KGPGGFYQPGYNDGAKLRLRMMCLGLDWD 292
IL PG V + +++ +Q ++R C + P PG G ++ +R + LG W
Sbjct: 14 ILGPGAVHIPDWMSRGQQEYLLRACVGWAATRAPRSIELPG---GGRMSVRTLSLGRHWL 70
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILP------- 345
P R D + IP+ + + +++ A A+ D V+ V P
Sbjct: 71 PY-------RYDDDEDTPPIPAWLLRAARSALTSAAAI---DRSVALVRPGHPEAAYSPD 120
Query: 346 -ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANK 403
A +PD +VN Y +GLHQDRDE PVVS S+GD+ F +G E
Sbjct: 121 TAFTPDAALVNLYGRGSTMGLHQDRDE-----DSDAPVVSLSLGDACTFRFGTPEHRGRP 175
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V LESGD+++FGG SR FHGV + +AP + PGR+N+T RQ
Sbjct: 176 YTDVRLESGDLVVFGGPSRLAFHGVPKVFDGTAPAWCTDVLGAAPGRVNITLRQ 229
>gi|289773256|ref|ZP_06532634.1| DNA repair protein [Streptomyces lividans TK24]
gi|289703455|gb|EFD70884.1| DNA repair protein [Streptomyces lividans TK24]
Length = 216
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 109/223 (48%), Gaps = 29/223 (13%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V L +L+ +Q ++ C+E + P G G + R +CLG W P
Sbjct: 15 PGAVHLPDWLSPGQQRELLDACREWARPPAGLRTVRTPGGGTMTARQVCLGRHWYP---- 70
Query: 298 YG-KKRQVDGCEPSVIP--SEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
YG VDG V P + L +R++++A E + PA DI ++
Sbjct: 71 YGYAATAVDGDGAPVKPFLARLDDLARRAVTDA----------LGAEGVAPAPY-DIALI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGD 413
NFY+ R+G+H+D DE + PVVS S+GD+ F +G+ E L SGD
Sbjct: 120 NFYDADARMGMHRDADE-----QTDAPVVSLSLGDTCVFRFGNPETRTRPYTDTELRSGD 174
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ +FGG SR +HGV ++P +AP L LR GRLN+T R
Sbjct: 175 LFVFGGPSRLAYHGVPRVHPGTAPPEL----GLR-GRLNITLR 212
>gi|375289859|ref|YP_005124399.1| putative DNA repair protein [Corynebacterium diphtheriae 241]
gi|376244692|ref|YP_005134931.1| putative DNA repair protein [Corynebacterium diphtheriae HC01]
gi|371579530|gb|AEX43197.1| putative DNA repair protein [Corynebacterium diphtheriae 241]
gi|372107322|gb|AEX73383.1| putative DNA repair protein [Corynebacterium diphtheriae HC01]
Length = 230
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 31/231 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKG----PGGFYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + P ++ + G + +M LGL W
Sbjct: 19 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWASG-TMSAYLMSLGLHW 77
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G IP EF L + A + V+D L A
Sbjct: 78 EYRTYQY--VSQWGGVAVPPIPVEFSALAHEVLCAA----------AGVDDSLAAWVDSY 125
Query: 350 --DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EK 406
D +VN+Y +G+HQD E + PVVS S+GDSA F G+ + + +
Sbjct: 126 RIDAALVNYYPPGAGMGMHQDAFEDSRA-----PVVSLSIGDSAVFRAGNGANRQRPWQD 180
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V+L SGD ++FGG SR +FH V ++ ++AP + GR+NLTFRQ
Sbjct: 181 VVLGSGDAVVFGGPSRDMFHSVVRLHEDTAP----TRCGVSQGRINLTFRQ 227
>gi|384503694|ref|YP_005680364.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 1002]
gi|302329798|gb|ADL19992.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 1002]
Length = 247
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 116/231 (50%), Gaps = 29/231 (12%)
Query: 235 ILRPGMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
++RPG+V L +L+ EQ ++V + L P +Q + G + +M LG
Sbjct: 35 LIRPGIVHLPGFLSFAEQRVMVEKARAVACRLAHTPLAMHQQQWKSGT-MSAHLMSLGKH 93
Query: 291 WDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP- 349
W+ + +Y + Q G E IP+ F + +A + +DS D+ P S
Sbjct: 94 WEYSSHQYVSEWQ--GQEVPDIPNNFLTQAYEAFEQA---VCLDS------DLAPWASDY 142
Query: 350 --DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EK 406
D +VN+Y +G+HQD E + PVVS S+G +A F G+ + NK +
Sbjct: 143 RIDAALVNYYPPGSGMGMHQDVFE-----ESSAPVVSLSIGATAVFRAGNSENRNKPWQD 197
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
VLL SGD L+FGG SR +FHG+ I+ + P +N L GR+N+TFRQ
Sbjct: 198 VLLLSGDALVFGGPSRKIFHGIKHIDDATVP----DNCGLEKGRINITFRQ 244
>gi|398787779|ref|ZP_10550084.1| 2OG-Fe(II) oxygenase [Streptomyces auratus AGR0001]
gi|396992742|gb|EJJ03840.1| 2OG-Fe(II) oxygenase [Streptomyces auratus AGR0001]
Length = 234
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 27/225 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L + +Q +V C+ +GP G + ++ +C+G W P
Sbjct: 27 VAPGAVHVPGWLPLAQQRELVTACRGWARGPAPIRHTKLPRGGVMSVQTVCIGWHWQP-- 84
Query: 296 RKYGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R D G + P +L +R++ A+ D+ +PD
Sbjct: 85 --YAYTRTADDVNGARVAAFPDWMVELGRRALVVAY----RDATAGA------GYTPDTA 132
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLES 411
++NFY+ +LG+HQD++E + PVVS S+GD+ F +G+ K + L S
Sbjct: 133 LINFYDGQAKLGMHQDKEE-----RSPAPVVSLSIGDTCVFRFGNTETRTKPYTDIELAS 187
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GD+ +FGG SR +HGV+ + P + A + L GRLN+T R
Sbjct: 188 GDLFVFGGPSRFAYHGVTKVRPGTGDPA----SGLSSGRLNITMR 228
>gi|38232761|ref|NP_938528.1| DNA repair protein [Corynebacterium diphtheriae NCTC 13129]
gi|38199019|emb|CAE48637.1| Putative DNA repair protein [Corynebacterium diphtheriae]
Length = 246
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 117/231 (50%), Gaps = 31/231 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGG----FYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + G ++ + G + +M LGL W
Sbjct: 35 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWASG-TMSAYLMSLGLHW 93
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G IP EF L AH +++ + V+D L A
Sbjct: 94 EYRTYQY--VSQWGGVAVPPIPVEFSAL-------AHEVLR---AAAGVDDSLAAWVDSY 141
Query: 350 --DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EK 406
D +VN+Y +G+HQD E + PVVS S+GDSA F G+ + + +
Sbjct: 142 RIDAALVNYYPPGAGMGMHQDAFEDSRA-----PVVSLSIGDSAVFRAGNGVNRQRPWQD 196
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V+L SGD ++FGG SR +FH V ++ +AP + GR+NLTFRQ
Sbjct: 197 VVLGSGDAVVFGGPSRDMFHSVVRLHAGTAP----TRCGVSQGRINLTFRQ 243
>gi|389849453|ref|YP_006351688.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 258]
gi|388246759|gb|AFK15750.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 258]
Length = 245
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 117/231 (50%), Gaps = 29/231 (12%)
Query: 235 ILRPGMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
++RPG+V L +L+ EQ ++V + + L P +Q + G + +M LG
Sbjct: 33 VIRPGIVHLPGFLSFAEQRVMVEKARAVARRLAHTPLAMHQQQWKSGT-MSAHLMSLGKH 91
Query: 291 WDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP- 349
W+ + +Y + Q G + IP+ F + +A + +DS D+ P S
Sbjct: 92 WEYNSHQYVSEWQ--GQKVPDIPNNFLTQAYEAFEQA---VCLDS------DLAPWASDY 140
Query: 350 --DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EK 406
D +VN+Y +G+HQD E + PVVS S+G +A F G+ + NK +
Sbjct: 141 RIDAALVNYYPPGSGMGMHQDVFE-----ESSAPVVSLSIGATAVFRAGNSENRNKPWQD 195
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
VLL SGD L+FGG SR +FHG+ I+ + P +N L GR+N+TFRQ
Sbjct: 196 VLLLSGDALVFGGPSRKIFHGIKRIDDATVP----DNCGLERGRINITFRQ 242
>gi|386739447|ref|YP_006212627.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 31]
gi|384476141|gb|AFH89937.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 31]
Length = 228
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 117/231 (50%), Gaps = 29/231 (12%)
Query: 235 ILRPGMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
++RPG+V L +L+ EQ ++V + + L P +Q + G + +M LG
Sbjct: 16 VIRPGIVHLPGFLSFAEQRVMVEKARAVARRLAHTPLAMHQQQWKSGT-MSAHLMSLGKH 74
Query: 291 WDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP- 349
W+ + +Y + Q G + IP+ F + +A + +DS D+ P S
Sbjct: 75 WEYNSHQYVSEWQ--GQKVPDIPNNFLTQAYEAFEQA---VCLDS------DLAPWASDY 123
Query: 350 --DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EK 406
D +VN+Y +G+HQD E + PVVS S+G +A F G+ + NK +
Sbjct: 124 RIDAALVNYYPPGSGMGMHQDVFE-----ESSAPVVSLSIGATAVFRAGNSENRNKPWQD 178
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
VLL SGD L+FGG SR +FHG+ I+ + P +N L GR+N+TFRQ
Sbjct: 179 VLLLSGDALVFGGPSRKIFHGIKRIDDATVP----DNCGLERGRINITFRQ 225
>gi|213964981|ref|ZP_03393180.1| DNA-N1-methyladenine dioxygenase [Corynebacterium amycolatum SK46]
gi|213952517|gb|EEB63900.1| DNA-N1-methyladenine dioxygenase [Corynebacterium amycolatum SK46]
Length = 224
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 114/227 (50%), Gaps = 23/227 (10%)
Query: 236 LRPGMVLLKHYLTIREQ---ILIVR-ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDW 291
+ PG+V L +LT+ +Q I +R I ++L P +P G ++++ M+ LG W
Sbjct: 13 ITPGVVHLPGWLTLDQQSGTITQLRDIARDLAGTPLAMTRPQLKSG-QMQVFMLHLGRMW 71
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
T Y G +P +L ++ A AL D +S PD+
Sbjct: 72 --ATNPYRYVTHAGGIRVPPVPDNLLELATEALGAA-AL--YDESLSQWPS---TFRPDM 123
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEF-LYGDERDANKAEKVLLE 410
+VN+Y +G+HQDR+E+ + P+VS S+GD A F + G E + + V L
Sbjct: 124 ALVNYYPPGATMGMHQDRNENSSA-----PIVSLSIGDEALFRIGGTENRSKPWDDVTLA 178
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGDV++FGG R FHGV P + PG L E L+ GR+N+TFRQ
Sbjct: 179 SGDVIVFGGPKRLAFHGV----PKTRPGTLPEACGLKEGRINITFRQ 221
>gi|376286665|ref|YP_005159231.1| putative DNA repair protein [Corynebacterium diphtheriae BH8]
gi|371583999|gb|AEX47664.1| putative DNA repair protein [Corynebacterium diphtheriae BH8]
Length = 246
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 119/228 (52%), Gaps = 25/228 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKG----PGGFYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + P ++ + G + +M LGL W
Sbjct: 35 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWVSG-TMSAYLMSLGLHW 93
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKV-SNVEDILPALSPD 350
+ +T +Y Q G IP EF L AH +++ + V +++ + + D
Sbjct: 94 EYRTYQY--VSQWGGVAVPPIPVEFSAL-------AHEILRTAAGVDASLAAWVDSYRID 144
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLL 409
+VN+Y +G+HQD E + PVVS S+GDSA F G+ + + + V+L
Sbjct: 145 AALVNYYPPGAGMGMHQDAFEDSRA-----PVVSLSIGDSAVFRAGNGVNRQRPWQDVVL 199
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGD ++FGG SR +FH V ++ ++AP + GR+NLTFRQ
Sbjct: 200 GSGDAVVFGGPSRDMFHSVVRLHEDTAP----TRCGVSQGRINLTFRQ 243
>gi|379714376|ref|YP_005302713.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 316]
gi|387137706|ref|YP_005693685.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|387139754|ref|YP_005695732.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 1/06-A]
gi|349734184|gb|AEQ05662.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|355391545|gb|AER68210.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 1/06-A]
gi|377653082|gb|AFB71431.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 316]
Length = 247
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 117/231 (50%), Gaps = 29/231 (12%)
Query: 235 ILRPGMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
++RPG+V L +L+ EQ ++V + + L P +Q + G + +M LG
Sbjct: 35 VIRPGIVHLPGFLSFAEQRVMVEKARAVARRLAHTPLAMHQQQWKSGT-MSAHLMSLGKH 93
Query: 291 WDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP- 349
W+ + +Y + Q G + IP+ F + +A + +DS D+ P S
Sbjct: 94 WEYNSHQYVSEWQ--GQKVPDIPNNFLTQAYEAFEQA---VCLDS------DLAPWASDY 142
Query: 350 --DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EK 406
D +VN+Y +G+HQD E + PVVS S+G +A F G+ + NK +
Sbjct: 143 RIDAALVNYYPPGSGMGMHQDVFE-----ESSAPVVSLSIGATAVFRAGNSENRNKPWQD 197
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
VLL SGD L+FGG SR +FHG+ I+ + P +N L GR+N+TFRQ
Sbjct: 198 VLLLSGDALVFGGPSRKIFHGIKRIDDATVP----DNCGLERGRINITFRQ 244
>gi|376241795|ref|YP_005132647.1| putative DNA repair protein [Corynebacterium diphtheriae CDCE 8392]
gi|372105037|gb|AEX71099.1| putative DNA repair protein [Corynebacterium diphtheriae CDCE 8392]
Length = 246
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 118/231 (51%), Gaps = 31/231 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGG----FYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + G ++ + G + +M LGL W
Sbjct: 35 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWVSG-TMSAYLMSLGLHW 93
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G IP EF L AH +++ + V+D L A
Sbjct: 94 EYRTYQY--VSQWGGVAVPPIPVEFSAL-------AHEVLR---AAAGVDDSLAAWVDSY 141
Query: 350 --DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EK 406
D +VN+Y +G+HQD E + PVVS S+GDSA F G+ + + +
Sbjct: 142 RIDAALVNYYPLGAGMGMHQDAFEDSRA-----PVVSLSIGDSAVFRAGNGVNRQRPWQD 196
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V+L SGD ++FGG SR +FH V ++ ++AP + GR+NLTFRQ
Sbjct: 197 VVLGSGDAVVFGGPSRDMFHSVVRLHEDTAP----TRCGVSQGRINLTFRQ 243
>gi|429198522|ref|ZP_19190344.1| putative alkylated DNA repair protein AlkB [Streptomyces ipomoeae
91-03]
gi|428665784|gb|EKX64985.1| putative alkylated DNA repair protein AlkB [Streptomyces ipomoeae
91-03]
Length = 223
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 103/223 (46%), Gaps = 29/223 (13%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L +Q ++ C++ + P G G + R +CLG W P
Sbjct: 19 PGAVHVPDWLDAEQQRRLLDACRDWARPPAGLRTVRTPGGGTMTSRQVCLGWHWYP---- 74
Query: 298 YGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
Y R V DG P +L +R+++E + + DI ++
Sbjct: 75 YAYARTVVDGDGAPVKPFPEWLGELGRRAVAETFGAKEAATAAY-----------DIALI 123
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGD 413
NFY+ R+G+H+D DE K PVVS S+GD+ F +G+ E A V L SGD
Sbjct: 124 NFYDADARMGMHRDGDE-----KSDAPVVSLSLGDTCVFRFGNTESRARPYTDVELRSGD 178
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ +FGG SR +HGV + +AP +L GRLN+T R
Sbjct: 179 LFVFGGASRRAYHGVPRVRAGTAPPSLGLA-----GRLNITLR 216
>gi|383313280|ref|YP_005374135.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis P54B96]
gi|384505785|ref|YP_005682454.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis C231]
gi|384507878|ref|YP_005684546.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis I19]
gi|385806531|ref|YP_005842928.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 267]
gi|387135644|ref|YP_005691624.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 42/02-A]
gi|302205240|gb|ADL09582.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis C231]
gi|308275481|gb|ADO25380.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis I19]
gi|348606089|gb|AEP69362.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 42/02-A]
gi|380868781|gb|AFF21255.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis P54B96]
gi|383803924|gb|AFH51003.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 267]
Length = 247
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 116/231 (50%), Gaps = 29/231 (12%)
Query: 235 ILRPGMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
++RPG+V L +L+ EQ ++V + L P +Q + G + +M LG
Sbjct: 35 LIRPGIVHLPGFLSFAEQRVMVEKARAVACRLAHTPLAMHQQQWKSGT-MSAHLMSLGKH 93
Query: 291 WDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP- 349
W+ + +Y + Q G E IP+ F + +A + +DS D+ P S
Sbjct: 94 WEYSSHQYVSEWQ--GQEVPDIPNNFLTQAYEAFEQA---VCLDS------DLAPWASDY 142
Query: 350 --DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EK 406
D +VN+Y +G+HQD E + PVVS S+G +A F G+ + NK +
Sbjct: 143 RIDAALVNYYPPGSGMGMHQDVFE-----ESSAPVVSLSIGATAVFRAGNSENRNKPWQD 197
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
VLL SGD L+FGG SR +FHG+ I+ + P +N L GR+N+TFRQ
Sbjct: 198 VLLLSGDALVFGGPSRKIFHGIKRIDDATVP----DNCGLERGRINITFRQ 244
>gi|376253226|ref|YP_005141685.1| putative DNA repair protein [Corynebacterium diphtheriae PW8]
gi|372116310|gb|AEX68780.1| putative DNA repair protein [Corynebacterium diphtheriae PW8]
Length = 246
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 119/228 (52%), Gaps = 25/228 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKG----PGGFYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + P ++ + G + +M LGL W
Sbjct: 35 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWVSG-TMSAYLMPLGLHW 93
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKV-SNVEDILPALSPD 350
+ +T +Y Q G IP EF L AH +++ + V +++ + + D
Sbjct: 94 EYRTYQY--VSQWGGVAVPPIPVEFSAL-------AHEVLRAAAGVDASLAAWVDSYRID 144
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLL 409
+VN+Y +G+HQD E + PVVS S+GDSA F G+ + + + V+L
Sbjct: 145 AALVNYYPPGAGMGMHQDAFEDSRA-----PVVSLSIGDSAVFRAGNGVNRQRPWQDVVL 199
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGD ++FGG SR +FH V ++ ++AP + GR+NLTFRQ
Sbjct: 200 GSGDAVVFGGPSRDMFHSVVRLHEDTAP----TRCGMSQGRINLTFRQ 243
>gi|386384036|ref|ZP_10069455.1| alkylated DNA repair protein [Streptomyces tsukubaensis NRRL18488]
gi|385668516|gb|EIF91840.1| alkylated DNA repair protein [Streptomyces tsukubaensis NRRL18488]
Length = 223
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 19/229 (8%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +L++ Q +V C+ +GP + G + +R +CLG W P
Sbjct: 1 MIAPGAVHVPGWLSVERQRELVEACRGWARGPVPLRRTVLPGGGVMSVRTVCLGWHWQP- 59
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPA-----LSP 349
Y R D + + LV+ S A + + + +P
Sbjct: 60 ---YRYSRTADDVNGARVADLPDWLVEWGRSALAAAHGIGAGGGGPSEAATGAGGAGYTP 116
Query: 350 DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVL 408
D ++NFY+ + R+G+HQD++E + G PVVS S+GD F G+ E V
Sbjct: 117 DTALINFYDGAARMGMHQDKEE-----RSGAPVVSLSIGDRCVFRLGNSETRGRPYTDVE 171
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+ +FGG SR +HGV P PG LR GRLN+T R+
Sbjct: 172 LASGDLFVFGGPSRFAYHGV----PKVYPGTADPRCGLRTGRLNITLRE 216
>gi|296120178|ref|ZP_06838731.1| putative DNA repair protein [Corynebacterium ammoniagenes DSM
20306]
gi|295966870|gb|EFG80142.1| putative DNA repair protein [Corynebacterium ammoniagenes DSM
20306]
Length = 229
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 22/227 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQE----LGKGPGGFYQPGYNDGAKLRLRMMCLGLDW 291
++PG+ + +L + Q +V ++ + P +P G ++ + LG W
Sbjct: 16 IKPGVAHVPGWLDVPTQRGLVEQLRDEARIMAGTPMAMRKPILKSGGQMSTFTLHLGHHW 75
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
D Q +Y + + G +P +L R + A + ++ + PD+
Sbjct: 76 DHQGYRYVDR--IGGTSVRPVPENLLELAHRGLRAAAEV------AEELQPWIAGFGPDM 127
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLE 410
+VNFY +G+HQD E+ + P+VS S+GD A F G NK + + L
Sbjct: 128 ALVNFYPPGATMGMHQDAYETTLA-----PIVSLSIGDEAVFRLGSTEHRNKPWDDIALL 182
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGD+++FGG +R FHGV P + PG L E L+ GR+N+TFRQ
Sbjct: 183 SGDLIVFGGPNRQAFHGV----PETRPGTLDEACGLKEGRINITFRQ 225
>gi|376289303|ref|YP_005161550.1| putative DNA repair protein [Corynebacterium diphtheriae C7 (beta)]
gi|372102699|gb|AEX66296.1| putative DNA repair protein [Corynebacterium diphtheriae C7 (beta)]
Length = 221
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 114/231 (49%), Gaps = 31/231 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGG----FYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + G ++ + G + +M LGL W
Sbjct: 10 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWAYG-TMSAYLMSLGLHW 68
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G IP EF L + A + V+D L A
Sbjct: 69 EYRTYQY--VSQWGGVAVPPIPVEFSALAHEVLCAA----------AGVDDSLAAWVDSY 116
Query: 350 --DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EK 406
D +VN+Y +G+HQD E + PVVS S+GDSA F G+ + + +
Sbjct: 117 RIDAALVNYYPPGAGMGMHQDAFEDSRA-----PVVSLSIGDSAVFRAGNGVNRQRPWQD 171
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V+L SGD ++FGG SR +FH V ++ +AP + GR+NLTFRQ
Sbjct: 172 VVLGSGDAVVFGGPSRDMFHSVVRLHEGTAP----TRCGVSQGRINLTFRQ 218
>gi|376292249|ref|YP_005163923.1| putative DNA repair protein [Corynebacterium diphtheriae HC02]
gi|372109572|gb|AEX75632.1| putative DNA repair protein [Corynebacterium diphtheriae HC02]
Length = 246
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 114/231 (49%), Gaps = 31/231 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGG----FYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + G ++ + G + +M LGL W
Sbjct: 35 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWAYG-TMSAYLMSLGLHW 93
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G IP EF L + A + V+D L A
Sbjct: 94 EYRTYQY--VSQWGGVAVPPIPVEFSALAHEVLCAA----------AGVDDSLAAWVDSY 141
Query: 350 --DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EK 406
D +VN+Y +G+HQD E + PVVS S+GDSA F G+ + + +
Sbjct: 142 RIDAALVNYYPLGAGMGMHQDAFEDSRA-----PVVSLSIGDSAVFRAGNGVNRQRPWQD 196
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V+L SGD ++FGG SR +FH V ++ +AP + GR+NLTFRQ
Sbjct: 197 VVLGSGDAVVFGGPSRDMFHSVVRLHEGTAP----TRCGVSQGRINLTFRQ 243
>gi|419859769|ref|ZP_14382419.1| putative DNA repair protein [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
gi|387983812|gb|EIK57267.1| putative DNA repair protein [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
Length = 230
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 114/231 (49%), Gaps = 31/231 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKG----PGGFYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + P ++ + G + +M LGL W
Sbjct: 19 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWAYG-TMSAYLMSLGLHW 77
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G IP EF L + A + V+D L A
Sbjct: 78 EYRTYQY--VSQWGGVAVPPIPVEFSALAHEVLCAA----------AGVDDSLAAWVDSY 125
Query: 350 --DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EK 406
D +VN+Y +G+HQD E + PVVS S+GDSA F G+ + + +
Sbjct: 126 RIDAALVNYYPPGAGMGMHQDAFEDSRA-----PVVSLSIGDSAVFRAGNGVNRQRPWQD 180
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V+L SGD ++FGG SR +FH V ++ +AP + GR+NLTFRQ
Sbjct: 181 VVLGSGDAVVFGGPSRDMFHSVVRLHEGTAP----TRCGVSQGRINLTFRQ 227
>gi|308178511|ref|YP_003917917.1| 2OG-Fe(II) oxygenase superfamily protein [Arthrobacter arilaitensis
Re117]
gi|307745974|emb|CBT76946.1| 2OG-Fe(II) oxygenase superfamily protein [Arthrobacter arilaitensis
Re117]
Length = 224
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 234 GILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDP 293
G LRPG L +L Q IVR E G GP ++ N G + ++ +CLG W P
Sbjct: 15 GALRPGAWHLPGWLDTAAQQWIVRRFFEWGDGPVPPHRTTVN-GHPMSVQSLCLGWHWSP 73
Query: 294 QTRKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
+Y K +DG + + +L +++++EA ++ +D PD+
Sbjct: 74 H--RYSKTADDLDGQLVAPMEQWLIRLGKQAVAEATGDLR------RAQD----YQPDVA 121
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL-LES 411
+VN+Y+ +G+HQD +E + PVVS S+GDSA F G+ + N+ + L L S
Sbjct: 122 LVNYYDVQATMGMHQDAEE-----RINAPVVSLSIGDSATFRLGNTENRNRPWQELRLAS 176
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GD+ +F G SR +H V+ I+ +AP L R+N+T RQ
Sbjct: 177 GDLFVFDGPSRFAYHSVTKIHAGTAPAGLGLGGG----RINITLRQ 218
>gi|302530452|ref|ZP_07282794.1| alkylated DNA repair protein AlkB [Streptomyces sp. AA4]
gi|302439347|gb|EFL11163.1| alkylated DNA repair protein AlkB [Streptomyces sp. AA4]
Length = 207
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 30/222 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT EQ +V C +G G+ G + +R +CLG W P
Sbjct: 11 IAPGAVHVPDWLTGEEQRDLVTAC----RGWRGYRSTRLPGGGVMSVRTVCLGWQWRPY- 65
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y + R+ DG P L +R++++A+ D + + PD+ +VN
Sbjct: 66 -RYERLRE-DGSPVEPFPDWLADLGRRALADAY-----DRPADDYQ-------PDVALVN 111
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGDV 414
+Y+ ++G+HQD+DE + PVVS S+GD+ F +G+ N+ V L SGD+
Sbjct: 112 YYDADAKMGMHQDKDE-----RSTEPVVSLSLGDTCVFRFGNTEHRNRPYADVELRSGDL 166
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+FGG SR FHGV P +A + + GRLN+T R
Sbjct: 167 FVFGGPSRLAFHGVLKTLPGTA-----DPDLGLTGRLNMTLR 203
>gi|29827984|ref|NP_822618.1| DNA repair protein [Streptomyces avermitilis MA-4680]
gi|29605085|dbj|BAC69153.1| putative DNA repair protein [Streptomyces avermitilis MA-4680]
Length = 222
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 103/225 (45%), Gaps = 29/225 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ P V + + Q + C++ + P G G + R +CLG W P
Sbjct: 13 VAPDAVHVPDWADAGRQRRFLAACRDWARPPAGLRTVHTPGGGTMTSRQVCLGWHWYP-- 70
Query: 296 RKYGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
YG R V DG +P +L + ++S+A +P + DI
Sbjct: 71 --YGYARTVVDGDGAPVKPLPDWLAELGRDAVSDALG-----------PQAVPPVPYDIA 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLES 411
++NFY R+G+H+D DE K G PVVS SVGD+ F +G+ R + V L S
Sbjct: 118 LINFYGADARMGMHRDSDE-----KSGAPVVSLSVGDTCVFRFGNARTRTRPYTDVELRS 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GD+ +FGG SR +HGV + ++AP L GRLN+T R
Sbjct: 173 GDLFVFGGASRLAYHGVPRVYADTAPPELGLV-----GRLNITLR 212
>gi|424861529|ref|ZP_18285475.1| alkylated DNA repair protein AlkB [Rhodococcus opacus PD630]
gi|356660001|gb|EHI40365.1| alkylated DNA repair protein AlkB [Rhodococcus opacus PD630]
Length = 221
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 25/224 (11%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +LT EQ +V C+ P G ++ ++ +CLG W P
Sbjct: 14 VMAPGAVHVPDWLTPEEQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWKPY 73
Query: 295 TRKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
+ Y + + G + +P +L +R++S+A+ +D PD +
Sbjct: 74 S--YSRTAEDAGGGRVAPVPDWLVELGRRAVSDAYG---------QPDD---GYIPDAAL 119
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESG 412
+NFY+ + ++G+HQD++E + VVS S+GD+ F +G+ K V L SG
Sbjct: 120 INFYDDTAKMGMHQDKEE-----RSDAAVVSLSIGDTCTFRFGNTTTRTKPYTDVELLSG 174
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
D+ +FGGESR +HGV P PG + L GRLN+T R
Sbjct: 175 DLFVFGGESRFAYHGV----PKVFPGTSDPDCGLTKGRLNITLR 214
>gi|363420889|ref|ZP_09308979.1| alkylated DNA repair protein [Rhodococcus pyridinivorans AK37]
gi|359735103|gb|EHK84067.1| alkylated DNA repair protein [Rhodococcus pyridinivorans AK37]
Length = 220
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 21/222 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L EQ +V +C++ + P G ++ + +CLG W P
Sbjct: 14 IAPGAVHVPDWLDPGEQRELVELCRDWARPPAPMRHTLLPGGGRMSVSTVCLGWHWSPY- 72
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R VD +P +L +R++++A+ D + PD ++N
Sbjct: 73 RYTRTAVDVDDAPVPPLPDRLVELGRRAVADAY-----DDPAAGG-----GYEPDTALIN 122
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGDV 414
FY+ R+G+HQD+DE + P+VS S+GD+ F +G+ E V LES D+
Sbjct: 123 FYDRDARMGMHQDKDE-----RVSAPIVSLSLGDACLFRFGNTESRGRPYTDVRLESRDL 177
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+FGG SR +HGV + P++ L GRLN+T R
Sbjct: 178 FVFGGPSRFAYHGVPVVYPDTG----SSRCGLTAGRLNITLR 215
>gi|89067381|ref|ZP_01154894.1| alkylated DNA repair protein, putative [Oceanicola granulosus
HTCC2516]
gi|89046950|gb|EAR53004.1| alkylated DNA repair protein, putative [Oceanicola granulosus
HTCC2516]
Length = 196
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 69/111 (62%), Gaps = 10/111 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
A +P C+VNFY R+G+HQDRDE + G PVVS S+GDSA F G+ K E
Sbjct: 92 AAAPQCCLVNFYGEGARMGMHQDRDEGDF----GQPVVSVSLGDSALFRIGNLTRGGKTE 147
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
V LESGDV++ GGE+R V+HG+ + PNS+ LL GR+NLT R
Sbjct: 148 SVWLESGDVVVIGGEARLVYHGIDRVKPNSS--TLLPEG----GRINLTLR 192
>gi|395770894|ref|ZP_10451409.1| putative DNA repair protein [Streptomyces acidiscabies 84-104]
Length = 231
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 104/227 (45%), Gaps = 33/227 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L Q ++ C+E + P G G + R +CLG W P
Sbjct: 13 VAPGAVHVPDWLDAAAQRDLLEACREWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP-- 70
Query: 296 RKYGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP--D 350
Y R V DG P+ +L +R+++ A+ D P P D
Sbjct: 71 --YAFARTVVDGDGSAVKPFPAWLGELGRRAVAAAY-------------DGPPEPGPAYD 115
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLL 409
I +VNFY+ R+G+HQD +E + PVVS S+GD F +G+ K V L
Sbjct: 116 IGLVNFYDADARMGMHQDAEE-----RSDAPVVSLSLGDRCVFRFGNTGSRGKPYTDVEL 170
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
SGD+ +FGG SR FH V + P +AP + + GRLN+T R
Sbjct: 171 RSGDLFVFGGASRRAFHAVPKVFPGTAP-----DGLGLVGRLNVTLR 212
>gi|384153724|ref|YP_005536540.1| alkylated DNA repair protein [Amycolatopsis mediterranei S699]
gi|340531878|gb|AEK47083.1| alkylated DNA repair protein [Amycolatopsis mediterranei S699]
Length = 208
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 109/223 (48%), Gaps = 32/223 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +L EQ +V C +G G+ +G + ++ +CLG W P
Sbjct: 12 IAPGAVHLPGWLGFDEQRELVAAC----RGWPGYRHTRLPNGGVMSVKSVCLGRHWYP-- 65
Query: 296 RKYGKKRQVDGCEPSV-IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
YG R P + P L +R+++ A+ + A +PD+ +V
Sbjct: 66 --YGYSRTTGEGTPVLPFPDWLGDLGRRALTAAYG------------EPAEAYAPDVALV 111
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGD 413
NFY+ + ++GLHQD+DE SL+ PVVS S+GD+ F +G+ E V L SGD
Sbjct: 112 NFYDATAKMGLHQDKDER--SLE---PVVSVSLGDACVFRFGNTETRGRPYTDVELRSGD 166
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
V +FGG SR +HGV P +A + + GRLN+T R
Sbjct: 167 VFVFGGPSRLAYHGVPKTLPGTA-----DPALGLAGRLNITLR 204
>gi|300790197|ref|YP_003770488.1| alkylated DNA repair protein [Amycolatopsis mediterranei U32]
gi|399542076|ref|YP_006554739.1| alkylated DNA repair protein [Amycolatopsis mediterranei S699]
gi|299799711|gb|ADJ50086.1| alkylated DNA repair protein [Amycolatopsis mediterranei U32]
gi|398322846|gb|AFO81793.1| alkylated DNA repair protein [Amycolatopsis mediterranei S699]
Length = 209
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 109/223 (48%), Gaps = 32/223 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +L EQ +V C +G G+ +G + ++ +CLG W P
Sbjct: 13 IAPGAVHLPGWLGFDEQRELVAAC----RGWPGYRHTRLPNGGVMSVKSVCLGRHWYP-- 66
Query: 296 RKYGKKRQVDGCEPSV-IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
YG R P + P L +R+++ A+ + A +PD+ +V
Sbjct: 67 --YGYSRTTGEGTPVLPFPDWLGDLGRRALTAAYG------------EPAEAYAPDVALV 112
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGD 413
NFY+ + ++GLHQD+DE SL+ PVVS S+GD+ F +G+ E V L SGD
Sbjct: 113 NFYDATAKMGLHQDKDER--SLE---PVVSVSLGDACVFRFGNTETRGRPYTDVELRSGD 167
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
V +FGG SR +HGV P +A AL GRLN+T R
Sbjct: 168 VFVFGGPSRLAYHGVPKTLPGTADPALGLA-----GRLNITLR 205
>gi|294628038|ref|ZP_06706598.1| DNA repair protein [Streptomyces sp. e14]
gi|292831371|gb|EFF89720.1| DNA repair protein [Streptomyces sp. e14]
Length = 214
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 100/215 (46%), Gaps = 28/215 (13%)
Query: 246 YLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQV- 304
+L Q ++ C+ + P G G + R +CLG W P Y R V
Sbjct: 6 WLDAARQRELLEACRRWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP----YAYARTVA 61
Query: 305 --DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGR 362
DG P+ +L +R++++A + + DI ++NFY+ R
Sbjct: 62 DGDGAPVKPFPAWLGELGRRAVTDALG-----------PEAAREAAYDIALINFYDADAR 110
Query: 363 LGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGDVLIFGGES 421
+GLH+D DE K PVVS S+GD+ F +G+ E V L SGD+ +FGG S
Sbjct: 111 MGLHRDADE-----KSAAPVVSLSLGDTCVFRFGNTETRTRPWTDVELRSGDLFVFGGPS 165
Query: 422 RHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
R +HGV ++ +APG L T GRLN+T R
Sbjct: 166 RFAYHGVPRVHAGTAPGDELGLT----GRLNVTLR 196
>gi|256824518|ref|YP_003148478.1| DNA-N1-methyladenine dioxygenase [Kytococcus sedentarius DSM 20547]
gi|256687911|gb|ACV05713.1| DNA-N1-methyladenine dioxygenase [Kytococcus sedentarius DSM 20547]
Length = 223
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 106/219 (48%), Gaps = 22/219 (10%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKY 298
G + +LT+ +Q IV E GP + G ++ +R +CLG W P
Sbjct: 20 GAYYVPGWLTLEQQRWIVARFHEWTNGPVPI-RAAKVRGHEMSVRTVCLGWHWRPHAYTR 78
Query: 299 GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYN 358
+ V+G P +L ++ AL+ + LP D +VN+Y+
Sbjct: 79 -EAVDVNGNRVLDFPDWMVRLGRK------ALVTATGNPYAGDGYLP----DTALVNYYD 127
Query: 359 TSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGDVLIF 417
+ R+G+HQDRDE + PVVS S+GD+ F +G+ NK + V L SGD+ +F
Sbjct: 128 DAARMGMHQDRDE-----RSAAPVVSLSIGDTCRFRFGNTETRNKPYQDVNLASGDLFVF 182
Query: 418 GGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GG SR +HG+ + P++AP E L GR+N+T R
Sbjct: 183 GGPSRLAYHGIPKVYPDTAP----EGCGLADGRINITMR 217
>gi|302549454|ref|ZP_07301796.1| alkylated DNA repair protein AlkB [Streptomyces viridochromogenes
DSM 40736]
gi|302467072|gb|EFL30165.1| alkylated DNA repair protein AlkB [Streptomyces viridochromogenes
DSM 40736]
Length = 213
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 101/225 (44%), Gaps = 36/225 (16%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L R Q ++ C+ + P G G + R +CLG W P
Sbjct: 15 PGAVHVPDWLDTRHQRDLLEACRTWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP---- 70
Query: 298 YGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDIL--PALSPDIC 352
Y R V DG P+ +L +R+ V D L P DI
Sbjct: 71 YAYARTVVDGDGAPVKPFPAWLGELGRRA----------------VRDTLGEPVADYDIA 114
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL-LES 411
+VNFY+ R+G+H+D DE K PVVS S+GD+ F +G+ + L L S
Sbjct: 115 LVNFYDDDARMGMHRDSDE-----KSDAPVVSLSLGDTCVFRFGNTDTRTRPWTDLELRS 169
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GD+ +FGG SR +HGV ++ +AP L GRLN+T R
Sbjct: 170 GDLFVFGGPSRLAYHGVPRVHAGTAPPGLGLT-----GRLNITLR 209
>gi|111019320|ref|YP_702292.1| alkylated DNA repair protein [Rhodococcus jostii RHA1]
gi|110818850|gb|ABG94134.1| alkylated DNA repair protein [Rhodococcus jostii RHA1]
Length = 218
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 29/225 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT Q +V C+ P G ++ ++ +CLG W P +
Sbjct: 12 VAPGAVHVPDWLTPAAQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWKPYS 71
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPA--LSPDIC 352
Y + + G + +P +L +R++SEA+ PA +PD
Sbjct: 72 --YSRTAEDAGGGRVAPVPGWLVELGRRAVSEAYGQ--------------PADGYTPDAA 115
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLES 411
++NFY+ + ++G+HQD++E + VVS S+GD+ F +G+ K V L S
Sbjct: 116 LINFYDDTAKMGMHQDKEE-----RSDAAVVSLSIGDTCTFRFGNTTTRTKPYTDVELLS 170
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GD+ +FGGESR +HGV + P ++ A T GRLN+T R
Sbjct: 171 GDLFVFGGESRFAYHGVPKVFPGTSDPACGLTT----GRLNITLR 211
>gi|451335705|ref|ZP_21906270.1| Alkylated DNA repair protein AlkB [Amycolatopsis azurea DSM 43854]
gi|449421597|gb|EMD27004.1| Alkylated DNA repair protein AlkB [Amycolatopsis azurea DSM 43854]
Length = 191
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 112/215 (52%), Gaps = 32/215 (14%)
Query: 243 LKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKR 302
+ +L + Q +V C+ G+ + +G + +R +CLG W P +Y K
Sbjct: 1 MPDWLDLDAQRRLVEACRSWR----GYRRTRLPNGGVMSVRTVCLGWHWYPY--RYSKVT 54
Query: 303 QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGR 362
DG PS L +R++ +A+ S+ E PDI +VNFY+++ +
Sbjct: 55 D-DGSPVLPFPSWLGDLGRRAVLDAYG-------SSSYE-------PDIALVNFYDSAAK 99
Query: 363 LGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGDVLIFGGES 421
+G+HQD+DE+ SL+ PVVS S+GD+ F +G+ D + V L SGD+ +FGGES
Sbjct: 100 MGMHQDKDEA--SLE---PVVSLSLGDACVFRFGNTSDRGRPYTDVDLRSGDLFVFGGES 154
Query: 422 RHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
R FHGV ++P +A + + GRLN+T R
Sbjct: 155 RLAFHGVPRVSPGTA-----DPELGLAGRLNITLR 184
>gi|397731719|ref|ZP_10498466.1| 2OG-Fe(II) oxygenase superfamily protein [Rhodococcus sp. JVH1]
gi|396932527|gb|EJI99689.1| 2OG-Fe(II) oxygenase superfamily protein [Rhodococcus sp. JVH1]
Length = 221
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 29/225 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT Q +V C+ P G ++ ++ +CLG W P +
Sbjct: 15 VAPGAVHVPDWLTPAAQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWKPYS 74
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPA--LSPDIC 352
Y + + G + +P +L +R++SEA+ PA +PD
Sbjct: 75 --YSRTAEDAGGGRVAPVPGWLVELGRRAVSEAYGQ--------------PADGYTPDAA 118
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLES 411
++NFY+ + ++G+HQD++E + VVS S+GD+ F +G+ K V L S
Sbjct: 119 LINFYDDTAKMGMHQDKEE-----RSDAAVVSLSIGDTCTFRFGNTTTRTKPYTDVELLS 173
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GD+ +FGGESR +HGV + P ++ A T GRLN+T R
Sbjct: 174 GDLFVFGGESRFAYHGVPKVFPGTSDPACGLTT----GRLNITLR 214
>gi|326382774|ref|ZP_08204464.1| alkylated DNA repair protein [Gordonia neofelifaecis NRRL B-59395]
gi|326198364|gb|EGD55548.1| alkylated DNA repair protein [Gordonia neofelifaecis NRRL B-59395]
Length = 221
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 32/224 (14%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYND--GA-KLRLRMMCLGLDWDPQT 295
G VL+ ++LT +Q +V + GP P ++ GA ++ ++ +CLG W P
Sbjct: 20 GAVLIPNWLTPEQQRWVVGQFRTWAAGP----VPPHSARIGAHRMSVQTVCLGWHWRPY- 74
Query: 296 RKYGKK-RQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y ++ V+G P +L + +++ A D+ +PD +V
Sbjct: 75 -EYTREATDVNGRRVLAFPEWLVRLGRLALTAAG---------DPAADLY---TPDTALV 121
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL-LESGD 413
NFY+ + R+G+HQDRDE + PVVS S+GD+A F +G+ + L LESGD
Sbjct: 122 NFYDDAARMGMHQDRDE-----RSSAPVVSLSIGDTARFRFGNSDGRGRPYTDLDLESGD 176
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ +FGG +R +HGV + P +AP + L GR+N+T R+
Sbjct: 177 LFVFGGPARFAYHGVQKVLPGTAP----VDCGLAAGRINITLRE 216
>gi|367468751|ref|ZP_09468585.1| Alkylated DNA repair protein AlkB [Patulibacter sp. I11]
gi|365816188|gb|EHN11252.1| Alkylated DNA repair protein AlkB [Patulibacter sp. I11]
Length = 228
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 106/227 (46%), Gaps = 24/227 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT+ EQ +V C+E GP + +G + ++ +CLG W P
Sbjct: 14 IAPGAVHVPDWLTVDEQRRLVAACREWAAGPAPMRRTRLPNGGLMSVQTVCLGWHWIPY- 72
Query: 296 RKYGK-KRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + VDG + P L +R++++A+ PD +V
Sbjct: 73 -RYSRIAEDVDGQPVTPFPDWLGDLGRRALADAYDARAARDY-----------RPDAALV 120
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGD 413
NFY+ R+G+H+D DE + PVVS S+G S F +G+ E V L SGD
Sbjct: 121 NFYDGQARMGMHRDEDE-----RSDAPVVSLSIGASCIFRFGNRETRGRPYTDVELRSGD 175
Query: 414 VLIFGGESRHVFHGVSSI----NPNSAPGALLENTMLRPGRLNLTFR 456
+ +FGG SR FHGV + A G LR GRLNLT R
Sbjct: 176 LFVFGGPSRFCFHGVPRTLADDDRQPALGQGDPPHGLRGGRLNLTLR 222
>gi|317507590|ref|ZP_07965304.1| alkylated DNA repair protein AlkB [Segniliparus rugosus ATCC
BAA-974]
gi|316254110|gb|EFV13466.1| alkylated DNA repair protein AlkB [Segniliparus rugosus ATCC
BAA-974]
Length = 262
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 98/222 (44%), Gaps = 24/222 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +L + EQ + E GP +G ++ + +CLG W P
Sbjct: 58 IAPGAVHLPDWLPLSEQARLAAAFAEWSCGPVPPRAASLPNGGRMSVETVCLGWHWLPY- 116
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R V+G P L + ++ EA A PD + N
Sbjct: 117 RYTRTADDVNGRRVLPFPDWLGDLARGAVEEACGAAT-------------AYRPDAALAN 163
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGDV 414
+Y R+G+HQD++E + PVVSFSVGDS F +G+ E V L SGD
Sbjct: 164 YYRPDARMGMHQDKEE-----RAADPVVSFSVGDSCVFRFGNVEGRGQPYTDVRLGSGDA 218
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+FGG +R +HGV + PN+AP L GR+N+T R
Sbjct: 219 FVFGGPARFAYHGVPKLFPNTAP----AGCGLDRGRINITVR 256
>gi|395236780|ref|ZP_10414933.1| alkylated DNA repair protein [Turicella otitidis ATCC 51513]
gi|394488035|emb|CCI83021.1| alkylated DNA repair protein [Turicella otitidis ATCC 51513]
Length = 272
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 238 PGMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDP 293
PG+V L +L++ E +V + +++ P +P G ++ + ++ LG W
Sbjct: 62 PGVVHLPGFLSLEESRALVEQARGLARQVAGTPTAMVRPEVGAG-QMSVYILSLGYHW-- 118
Query: 294 QTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
QT+ Y R VDG +P ++ LV R + A A+ S + + +
Sbjct: 119 QTKPYRYVRSVDGARVPALPENYQGLVDRVLDRAAAVSDELSPWRG------RMRAETAL 172
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK-VLLESG 412
VNFY +G+H D +E + G PVVS S+G SA F G+ + + + V L SG
Sbjct: 173 VNFYPPGSHMGMHVDGNE-----ESGAPVVSLSIGQSALFRMGNPDNRGRPYRDVSLLSG 227
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
D ++FGG +R +HG+ ++ P + P E L+ GR+N+T R+
Sbjct: 228 DAIVFGGPARRNYHGIPAVQPGTTP----EGCGLKDGRINITIRE 268
>gi|423350296|ref|ZP_17327949.1| alkylated DNA repair protein AlkB [Turicella otitidis ATCC 51513]
gi|404387737|gb|EJZ82842.1| alkylated DNA repair protein AlkB [Turicella otitidis ATCC 51513]
Length = 229
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 111/225 (49%), Gaps = 23/225 (10%)
Query: 238 PGMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDP 293
PG+V L +L++ E +V + +++ P +P G ++ + ++ LG W
Sbjct: 19 PGVVHLPGFLSLEESRALVEQARGLARQVAGTPTAMVRPEVGAG-QMSVYILSLGYHW-- 75
Query: 294 QTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
QT+ Y R VDG +P ++ LV R + A A+ S + + +
Sbjct: 76 QTKPYRYVRSVDGARVPALPENYQGLVDRVLDRAAAVSDELSPWRG------RMRAETAL 129
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK-VLLESG 412
VNFY +G+H D +E + G PVVS S+G SA F G+ + + + V L SG
Sbjct: 130 VNFYPPGSHMGMHVDGNE-----ESGAPVVSLSIGQSALFRMGNPDNRGRPYRDVSLLSG 184
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
D ++FGG +R +HG+ ++ P + P E L+ GR+N+T R+
Sbjct: 185 DAIVFGGPARRNYHGIPAVQPGTTP----EGCGLKDGRINITIRE 225
>gi|333022632|ref|ZP_08450696.1| putative DNA repair protein [Streptomyces sp. Tu6071]
gi|332742484|gb|EGJ72925.1| putative DNA repair protein [Streptomyces sp. Tu6071]
Length = 222
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 109/224 (48%), Gaps = 25/224 (11%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG V + +L + +V C++ +GP + G + + +CLG W P
Sbjct: 15 LAPGAVHVPDWLPPESRRALVEACRDWARGPVPMRRARLPRGGVMSVDSLCLGRHWLPY- 73
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + V+G +P+ L +R+++ A+ + ++ PD+ +V
Sbjct: 74 -RYSRTADDVNGAPVLALPAWLADLGRRAIAAAYDDEEAAAR----------YEPDVALV 122
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGD 413
N Y +G+HQD++E + PVVS S+GD+ F G+ E + + LESGD
Sbjct: 123 NHYGPGATMGMHQDKEE-----RASAPVVSLSIGDTCVFRLGNTETRGRPWQDIELESGD 177
Query: 414 VLIFGGESRHVFHGVSSINPNSA-PGALLENTMLRPGRLNLTFR 456
+L+FGG SR V+HGV + P + PG L GRLNLT R
Sbjct: 178 LLVFGGPSRFVYHGVPKVRPGTGDPGDGLAR-----GRLNLTLR 216
>gi|159046112|ref|YP_001534906.1| alpha-ketoglutarate-dependent dioxygenase alkB [Dinoroseobacter
shibae DFL 12]
gi|157913872|gb|ABV95305.1| alpha-ketoglutarate-dependent dioxygenase alkB [Dinoroseobacter
shibae DFL 12]
Length = 211
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 101/221 (45%), Gaps = 34/221 (15%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--DPQT 295
G+ + K ++ Q +V + + + FY+P G + +RM G W D Q
Sbjct: 19 GVAIYKGFVDRAAQEALVEDLRGVARA-APFYRPVTPSGKAMSVRMTAAGRFGWVSDRQG 77
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y G P IP+ + R + EA P+ C+VN
Sbjct: 78 YRYAPTHPGGGAWPD-IPNSVLTIWDRLVPEAR-------------------RPECCLVN 117
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVL 415
FY+ ++GLHQDRDE+ +S PV+S S+GD+A F G E + LESGDV
Sbjct: 118 FYDAHAKMGLHQDRDEADFSQ----PVLSVSLGDAARFRVGSTSRGGTTESLWLESGDVA 173
Query: 416 IFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ GGE+R + HG+ I P S+ + GR+NLT R
Sbjct: 174 VMGGEARLIHHGIDRIKPGSS------TLLPEGGRINLTLR 208
>gi|407975416|ref|ZP_11156321.1| 2OG-Fe(II) oxygenase [Nitratireductor indicus C115]
gi|407429044|gb|EKF41723.1| 2OG-Fe(II) oxygenase [Nitratireductor indicus C115]
Length = 205
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 70/112 (62%), Gaps = 10/112 (8%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
AL P+ C+VNFY+ + ++GLHQDRDE +S PVVS S+GD+ F G + +
Sbjct: 99 ALQPEACLVNFYSENAKMGLHQDRDEQEFSA----PVVSISLGDTCLFRVGGTTRSARTA 154
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V L+SGDV++ GG R FHGV I P ++ LL+N PGR+NLT R+
Sbjct: 155 SVKLQSGDVVVLGGAGRLAFHGVDRIYPGTS--TLLKN----PGRINLTLRR 200
>gi|325003075|ref|ZP_08124187.1| alkylated DNA repair protein [Pseudonocardia sp. P1]
Length = 242
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 103/223 (46%), Gaps = 21/223 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG V + +L +R Q +V C+E G GA++ +R +CLG W P
Sbjct: 13 LAPGAVHVPGWLDLRRQRFLVERCREWAAQGPGIRAAALPGGARMSVRTVCLGWHWIPY- 71
Query: 296 RKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + R DG + P L + ++++A+ + SPDI ++
Sbjct: 72 -RYSRTRDDQDGSPVAEFPIWLGDLGREAVADAYG-----DPTRGL-----GYSPDIALI 120
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGD 413
N Y RLG+H+D DE PVVS S+G F G+ E V L SGD
Sbjct: 121 NHYTGDARLGMHRDGDEHAPD-----PVVSVSLGAPCVFRLGNTEHRGRPWTDVELRSGD 175
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+L+FG +SR +HGV + P G E+ L GRLN+T R
Sbjct: 176 LLVFGDDSRLAYHGVPRVLPPEPGGT--EDIGLSAGRLNITLR 216
>gi|72161831|ref|YP_289488.1| DNA-N1-methyladenine dioxygenase [Thermobifida fusca YX]
gi|71915563|gb|AAZ55465.1| DNA-N1-methyladenine dioxygenase [Thermobifida fusca YX]
Length = 230
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 25/223 (11%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L + EQ +V +C+E +GPGG + G + + M LG W P
Sbjct: 13 VAPGAVHVPGWLDLEEQRALVDLCREWMRGPGGMTR-HRTRGGTMSVAMTSLGWYWRPY- 70
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y DG +P L R ++ A+ + PA + D+ +VN
Sbjct: 71 -RYSATLP-DGRPVPPLPPVLSTLALRGLAAAYGTVPA-----------PAPAYDVALVN 117
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGDV 414
FY + +G+H+D DE + PVVS S+GD+ F +G+ + V L SGD+
Sbjct: 118 FYAATATMGMHRDTDE-----RTDAPVVSVSLGDTCVFRFGNTATRTRPYTDVELRSGDL 172
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+FGG SR +HGV + +A AL L GR+N+T R
Sbjct: 173 FVFGGPSRWAYHGVPRVFAGTANPAL----GLESGRINITVRA 211
>gi|425733963|ref|ZP_18852283.1| DNA-N1-methyladenine dioxygenase [Brevibacterium casei S18]
gi|425482403|gb|EKU49560.1| DNA-N1-methyladenine dioxygenase [Brevibacterium casei S18]
Length = 240
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 14/228 (6%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V L +L Q I+R GP + G + + + LG W P
Sbjct: 16 VVAPGAVWLPGFLDDAAQAWILRQYAAWRAGPVPAHATTIR-GHPMSVTTIGLGWHWRPG 74
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMD----SKVSNVEDILP-ALSP 349
R + + V+ P +L ++ ++ + D S V + P A SP
Sbjct: 75 -RYDREAKDVNNERVLPFPDWMTRLGRQVIAATAEAVAADPDSPSPVPASWGLDPDAYSP 133
Query: 350 DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVL 408
D+ +VN+Y+ S ++G+HQD+DE PVVS S+GDS F +G+ N+ E +
Sbjct: 134 DVALVNYYDESAKMGMHQDKDE-----HDPAPVVSLSLGDSCTFRFGNTETKNRPYEDIR 188
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L SGD +FGG +R +HGV+ I+P +AP A + L GR N+T R
Sbjct: 189 LASGDAFVFGGPARFAYHGVTRIHPGTAPEA-ARLSDLGGGRTNITMR 235
>gi|397652882|ref|YP_006493565.1| hypothetical protein CULC0102_0129 [Corynebacterium ulcerans 0102]
gi|393401838|dbj|BAM26330.1| hypothetical protein CULC0102_0129 [Corynebacterium ulcerans 0102]
Length = 207
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 109/223 (48%), Gaps = 29/223 (13%)
Query: 243 LKHYLTIREQILIV----RICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKY 298
L +L++ EQ +V + + L P +Q + G + +M LG W+ + +Y
Sbjct: 3 LPGFLSLAEQRAMVGKARAVARRLAHTPLAMHQQQWKTG-TMSAHLMSLGKHWEYSSHQY 61
Query: 299 GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP---DICIVN 355
+ Q G + IP F +M +A L DS ++ P S D +VN
Sbjct: 62 VSEWQ--GQKVPAIPDRFLVQAYEAMRQAACL---DSSLA------PWTSDYRIDAALVN 110
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGDV 414
+Y +GLHQD E + PVVS S+G +A F G+ + NK + VLL SGD
Sbjct: 111 YYPPGSGMGLHQDAFE-----ESSAPVVSLSIGATAVFRAGNSENRNKPWQDVLLLSGDA 165
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+FGG SR +FHG+ I+ + P +N L GR+N+TFRQ
Sbjct: 166 LVFGGPSRKIFHGIKRIDAATVP----DNCGLEKGRINMTFRQ 204
>gi|407778191|ref|ZP_11125456.1| 2OG-Fe(II) oxygenase [Nitratireductor pacificus pht-3B]
gi|407299872|gb|EKF18999.1| 2OG-Fe(II) oxygenase [Nitratireductor pacificus pht-3B]
Length = 208
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 12/113 (10%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
A +P+ C+VNFY ++GLHQDRDE +S PVVS S+GD+ F G + +K
Sbjct: 99 AAAPEACLVNFYGEGAKMGLHQDRDEQEFSA----PVVSVSLGDTCLFRAGGPKRGDKTV 154
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLR-PGRLNLTFRQ 457
V L+SGDV++ GG R FHGV I P + +T+L+ PGR+NLT R+
Sbjct: 155 SVKLQSGDVVVMGGAGRLAFHGVDRIYPGT-------STLLKSPGRINLTLRR 200
>gi|19551394|ref|NP_599396.1| alkylated DNA repair protein [Corynebacterium glutamicum ATCC
13032]
gi|62389038|ref|YP_224440.1| DNA repair protein [Corynebacterium glutamicum ATCC 13032]
gi|21322908|dbj|BAB97537.1| Alkylated DNA repair protein [Corynebacterium glutamicum ATCC
13032]
gi|41324371|emb|CAF18711.1| PUTATIVE DNA REPAIR PROTEIN [Corynebacterium glutamicum ATCC 13032]
gi|385142323|emb|CCH23362.1| alkylated DNA repair protein [Corynebacterium glutamicum K051]
Length = 230
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 23/224 (10%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGK----GPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
G+V L ++L + EQ +V ++L + P +P G ++ + M+ LG W
Sbjct: 22 GVVHLPNFLGLAEQKALVAQARDLAREVVGTPLAMVRPKLKSG-QMSVHMLHLGKYWASN 80
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y VDG +P F L R AL+ S ++++ A + +V
Sbjct: 81 PYRY--VDVVDGFPVPPLPDSFVDLAHR------ALLSAGSLSNSLQSWSEAYRAEAALV 132
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGD 413
N+Y+ +G+HQD +E + PV+S S+GD+ F G + NK + L SGD
Sbjct: 133 NYYSPDASMGMHQDANEESEA-----PVISLSIGDTGIFRLGGTLNRNKPWTDIPLMSGD 187
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++FGG +R FHG+ SI N+AP L+ GR+N+T RQ
Sbjct: 188 LIVFGGANRQAFHGIPSIEANTAPA----GCGLKEGRINITIRQ 227
>gi|302523470|ref|ZP_07275812.1| alkylated DNA repair protein AlkB [Streptomyces sp. SPB78]
gi|302432365|gb|EFL04181.1| alkylated DNA repair protein AlkB [Streptomyces sp. SPB78]
Length = 219
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 108/224 (48%), Gaps = 25/224 (11%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG V + +L + +V C++ +GP + G + + +CLG W P
Sbjct: 12 LAPGAVHVPDWLPPESRRALVGACRDWARGPVPMRRARLPRGGVMSVDSLCLGRHWLPY- 70
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + V+G +P+ L +R+++ A+ + ++ PD+ +V
Sbjct: 71 -RYSRTADDVNGAPVLPLPAWLADLGRRAIAAAYDDEEAAAR----------YEPDVALV 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGD 413
N Y +G+HQD++E + PVVS S+GD+ F G+ E + V LESGD
Sbjct: 120 NHYGPGATMGMHQDKEE-----RASAPVVSLSIGDTCVFRLGNTETRGRPWQDVELESGD 174
Query: 414 VLIFGGESRHVFHGVSSINPNSA-PGALLENTMLRPGRLNLTFR 456
+L+FGG SR +HGV + P + PG L GRLNLT R
Sbjct: 175 LLVFGGPSRFAYHGVPKVRPGTGDPGDGLAR-----GRLNLTLR 213
>gi|384514675|ref|YP_005709767.1| hypothetical protein CULC809_00133 [Corynebacterium ulcerans 809]
gi|334695876|gb|AEG80673.1| hypothetical protein CULC809_00133 [Corynebacterium ulcerans 809]
Length = 207
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 107/220 (48%), Gaps = 23/220 (10%)
Query: 243 LKHYLTIREQILIV----RICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKY 298
L +L++ EQ +V + + L P +Q + G + +M LG W+ + +Y
Sbjct: 3 LPGFLSLAEQRAMVGKARAVARRLAHTPLPMHQQQWKTG-TMSAHLMSLGKHWEYSSHQY 61
Query: 299 GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYN 358
+ Q G + IP F +M +A L + ++ I D +VN+Y
Sbjct: 62 VSEWQ--GQKVPAIPDSFLVQAYEAMRQAACLDSSLAPWTSHYRI------DAALVNYYP 113
Query: 359 TSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGDVLIF 417
+GLHQD E + PVVS S+G +A F G+ + NK + VLL SGD L+F
Sbjct: 114 PGSGMGLHQDAFE-----ESSAPVVSLSIGATAVFRAGNSENRNKPWQDVLLLSGDALVF 168
Query: 418 GGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GG SR +FHG+ I+ + P +N L GR+N+TFRQ
Sbjct: 169 GGPSRKIFHGIKRIDAATVP----DNCGLEKGRINMTFRQ 204
>gi|307942720|ref|ZP_07658065.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Roseibium sp.
TrichSKD4]
gi|307773516|gb|EFO32732.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Roseibium sp.
TrichSKD4]
Length = 206
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 242 LLKHYLTIREQILIVRICQELGKGPGGFYQPGY-NDGAKLRLRMM-CLGLDW--DPQTRK 297
L +H+ ++++ L+ I LG P Y+P G +RM C L W D +
Sbjct: 14 LAEHFDRVQQENLLDIIRDVLGSAP--LYRPEMPRTGKPFSVRMSNCGALGWVSDKDGYR 71
Query: 298 YGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFY 357
Y V G IP L Q +S AL P+ C++NFY
Sbjct: 72 YQPTHPVTGNPWPPIPEILLSLWQ-ELSPDAAL------------------PEACLINFY 112
Query: 358 NTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIF 417
N R+GLHQDRDE + PV+S S+GD+A F G + + L+SGDV++
Sbjct: 113 NEDARMGLHQDRDEETFDA----PVISVSLGDTAVFRIGGVERKSPTRSMKLQSGDVVVL 168
Query: 418 GGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GGE+R FHG+ + PN++ M + GR+NLT R+
Sbjct: 169 GGEARLAFHGIDRLVPNTS------TLMRQGGRVNLTLRR 202
>gi|318059514|ref|ZP_07978237.1| alkylated DNA repair protein [Streptomyces sp. SA3_actG]
gi|318079147|ref|ZP_07986479.1| alkylated DNA repair protein [Streptomyces sp. SA3_actF]
Length = 219
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 25/224 (11%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG V + +L + +V C++ +GP + G + + +CLG W P
Sbjct: 12 LAPGAVHVPDWLPPESRRALVEACRDWARGPVPMRRARLPRGGVMSVDSLCLGRHWLPY- 70
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + V+G +P+ L +R+++ A+ + ++ PD+ +V
Sbjct: 71 -RYSRTADDVNGAPVLPLPAWLADLGRRAIAAAYDDEEAAAR----------YEPDVALV 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGD 413
N Y +G+HQD++E + PVVS S+GD+ F G+ + + V LESGD
Sbjct: 120 NHYGPGATMGMHQDKEE-----RASAPVVSLSIGDTCVFRLGNTDTRGRPWQDVELESGD 174
Query: 414 VLIFGGESRHVFHGVSSINPNSA-PGALLENTMLRPGRLNLTFR 456
+L+FGG SR +HGV + P + PG L GRLNLT R
Sbjct: 175 LLVFGGPSRFAYHGVPKVRPGTGDPGDGLAR-----GRLNLTLR 213
>gi|261820346|ref|YP_003258452.1| 2OG-Fe(II) oxygenase [Pectobacterium wasabiae WPP163]
gi|261604359|gb|ACX86845.1| 2OG-Fe(II) oxygenase [Pectobacterium wasabiae WPP163]
Length = 218
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 114/247 (46%), Gaps = 36/247 (14%)
Query: 215 NFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGP-GGFYQPG 273
NF + + R+ WT L PG ++L+ L+ + + + P PG
Sbjct: 2 NFDLFADEAPRR---WTE--TLAPGALILRGRAYDDASALLAALQTVIARAPLRNMVTPG 56
Query: 274 YNDGAKLRLRMM-CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHAL 330
G + + M C L W D Q +Y + G +P F +L Q++ SEA
Sbjct: 57 ---GFVMSVAMSNCGRLGWVTDEQGYRYTSHDPLSGEAWPAMPEVFSRLAQQAASEAG-- 111
Query: 331 IKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDS 390
A PD C++N Y+ R+ LHQD++E + P+VS S+G S
Sbjct: 112 -------------FAAFEPDACLINRYDVGTRMSLHQDKNERDFRQ----PIVSASLGLS 154
Query: 391 AEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGR 450
A FL+G +++A++V L GDV+++GGESR FHG+ + S P + + R
Sbjct: 155 ATFLFGGMARSDRAQRVPLTHGDVVVWGGESRLYFHGILPLKNGSVPQGMTDEC-----R 209
Query: 451 LNLTFRQ 457
NLTFR+
Sbjct: 210 FNLTFRK 216
>gi|260432005|ref|ZP_05785976.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415833|gb|EEX09092.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Silicibacter
lacuscaerulensis ITI-1157]
Length = 215
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 90/189 (47%), Gaps = 29/189 (15%)
Query: 269 FYQPGYNDGAKLRLRMMCLG-LDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEA 327
+ P G ++ +RM G L W R Y + G P +P + + Q ++
Sbjct: 52 LFHPSTASGRRMSVRMTSAGPLGWVSDGRGY----RYQGAHPKGMP--WPDIPQPILTIW 105
Query: 328 HALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSV 387
H + +D PD C++N+Y ++GLHQDRDE+ +S PVVS S+
Sbjct: 106 HEVTGLDR------------DPDCCLINYYGEGAKMGLHQDRDEADFSW----PVVSISL 149
Query: 388 GDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLR 447
GD A F G+ K E V L SGDV+I GG +R +HG+ I S+ + +
Sbjct: 150 GDDALFRIGNTTRGGKTESVWLNSGDVVIMGGPARLTYHGIDRIRFGSS------RLLPK 203
Query: 448 PGRLNLTFR 456
GR+NLT R
Sbjct: 204 GGRINLTLR 212
>gi|414078209|ref|YP_006997527.1| alkylated DNA repair protein [Anabaena sp. 90]
gi|414078601|ref|YP_006997919.1| 2OG-Fe(II) oxygenase [Anabaena sp. 90]
gi|413971625|gb|AFW95714.1| alkylated DNA repair protein [Anabaena sp. 90]
gi|413972017|gb|AFW96106.1| 2OG-Fe(II) oxygenase [Anabaena sp. 90]
Length = 197
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 240 MVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--DPQTR 296
M+ L+ YL+ +Q I++ C+E+GK + P +G+ +M C + W D
Sbjct: 1 MLHLQQYLSESQQQEILQHCREIGK-RSPLFSPTMKNGSPFNYQMTNCGKVGWISDQNGY 59
Query: 297 KYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNF 356
+Y K V IP + L + +E V D P+ C++N+
Sbjct: 60 RYDDKHPVTNKPWQPIPGVIRNLAKSLAAE-------------VGDY--NYKPETCLINY 104
Query: 357 YNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLI 416
Y S +LGLHQD E + + P++S S+GD FL G +R + ++++L+SGD+LI
Sbjct: 105 YTQSSKLGLHQDNTE----VNQKSPIISISLGDDGIFLIGGKRRKDPTKEIILKSGDILI 160
Query: 417 FGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GE R +HG+ I ++ N + GRLNLT RQ
Sbjct: 161 LHGEFRMFYHGIKGIIHGTS------NLLKSGGRLNLTIRQ 195
>gi|295835146|ref|ZP_06822079.1| DNA repair protein [Streptomyces sp. SPB74]
gi|295825338|gb|EDY44784.2| DNA repair protein [Streptomyces sp. SPB74]
Length = 222
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 25/225 (11%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG V + +L + +V C++ +GP + G + + +CLG W P
Sbjct: 15 LAPGAVHVPDWLPPERRGALVEECRDWARGPVPMRRARLPRGGVMSVDSLCLGRHWLPY- 73
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + V+G +P +L +R+++ A+ + ++ PD+ +V
Sbjct: 74 -RYSRTADDVNGAPVLPLPGWLGELGRRAIAAAYDDEEAAAR----------YEPDVALV 122
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGD 413
N Y +G+HQD++E + PVVS S+GD+ F G+ E + V LESGD
Sbjct: 123 NHYGPGATMGMHQDKEE-----RASAPVVSLSIGDTCVFRLGNTETRGRPWQDVELESGD 177
Query: 414 VLIFGGESRHVFHGVSSINPNSA-PGALLENTMLRPGRLNLTFRQ 457
+L+FGG SR +HGV + P + PG L GRLN+T R
Sbjct: 178 LLVFGGPSRFAYHGVPKVRPGTGDPGDGLAR-----GRLNITLRM 217
>gi|385870520|gb|AFI89040.1| Alkylated DNA repair protein AlkB [Pectobacterium sp. SCC3193]
Length = 218
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 36/247 (14%)
Query: 215 NFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGP-GGFYQPG 273
NF + + R+ WT L PG ++L+ L+V + + + P PG
Sbjct: 2 NFDLFADEAPRR---WTE--TLAPGAIILRGRAYDDASALLVALKTVIARAPLRNMVTPG 56
Query: 274 YNDGAKLRLRMM-CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHAL 330
G + + M C L W D Q +Y + G +P F +L Q++ EA
Sbjct: 57 ---GFVMSVAMSNCGRLGWVTDEQGYRYTSHDPLSGEAWPAMPEAFSRLAQQAAGEAG-- 111
Query: 331 IKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDS 390
PD C++N Y+ R+ LHQD++E + P+VS S+G S
Sbjct: 112 -------------FADFEPDACLINRYDVGTRMSLHQDKNERDFRQ----PIVSVSLGLS 154
Query: 391 AEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGR 450
A FL+G +++A++V L GDV+++GGESR FHG+ + S P + + R
Sbjct: 155 ATFLFGGMVRSDRAQRVPLTHGDVVVWGGESRLYFHGILPLKNGSVPQGMTDEC-----R 209
Query: 451 LNLTFRQ 457
NLTFR+
Sbjct: 210 FNLTFRK 216
>gi|194292874|ref|YP_002008781.1| alkylated DNA repair protein [Cupriavidus taiwanensis LMG 19424]
gi|193226778|emb|CAQ72729.1| Alkylated DNA repair protein [Cupriavidus taiwanensis LMG 19424]
Length = 220
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPG-GFYQPGYNDGAKLRLRMM-CLGLDW--DPQ 294
G V+L+ ++L+ + L P PG G K+ + M C W D +
Sbjct: 25 GAVVLRGAARASAEVLLADVQTILALAPWRHMVTPG---GLKMSVAMTNCGACGWVSDAR 81
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + G +P+ F++L + +A +PD C++
Sbjct: 82 GYRYDAVDPLSGQAWPDMPASFRELAASAAEQAG---------------FAGFAPDACLI 126
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
N Y RL LHQDRDE ++ P+VS S+G A FL+G R A+K +++ L GDV
Sbjct: 127 NRYVPGTRLSLHQDRDERDFTA----PIVSVSLGLPAVFLFGGMRRADKPQRIRLAHGDV 182
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++GG SR FHGV AP A ++ +L P R+NLTFR+
Sbjct: 183 VVWGGPSRLAFHGV-------APLADGDHPLLGPLRINLTFRK 218
>gi|456356557|dbj|BAM91002.1| alkylated DNA repair protein AlkB [Agromonas oligotrophica S58]
Length = 220
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 106/225 (47%), Gaps = 31/225 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG +LL+ + E LI I + + P F Q G ++ + M C W D
Sbjct: 22 LGPGAMLLRGFARPHETELIAAIEAIITQAP--FRQMVTPGGHQMSVAMTNCGSFGWVTD 79
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
+Y G +P F++L +++ EA P +PD C
Sbjct: 80 RSGYRYDPVDPESGKPWPAMPPLFRKLAEQAAREAG---------------FPGFAPDAC 124
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y ++ LHQDRDE G P+VS S+G A FL+G + +KA++ L G
Sbjct: 125 LINRYEPGAKMSLHQDRDER----DIGAPIVSVSLGLPATFLFGGLKRTDKAQRYRLLHG 180
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
DV+++GG +R FHGV AP A E+ +L R+NLTFR+
Sbjct: 181 DVVVWGGPARLAFHGV-------APLADGEHGLLGRRRINLTFRR 218
>gi|357410569|ref|YP_004922305.1| 2OG-Fe(II) oxygenase [Streptomyces flavogriseus ATCC 33331]
gi|320007938|gb|ADW02788.1| 2OG-Fe(II) oxygenase [Streptomyces flavogriseus ATCC 33331]
Length = 222
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 21/222 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG + +LT ++ +V C+ GP G + +R +C+G W P
Sbjct: 12 IAPGAWHVPDWLTPAQRRALVTACRAWATGPVPIRHTRLPRGGVMSVRTVCVGWHWQPY- 70
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R V+G + P +L +R++ A+ E +PD ++N
Sbjct: 71 RYTRTADDVNGLRVAEFPDWMVRLGRRAVLAAY----------GDEARAQEYTPDTALIN 120
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGDV 414
FY+ R+G+HQD+DE + PVVS S+GD+ F G+ E V L SGD+
Sbjct: 121 FYDGQARMGMHQDKDE-----RSPAPVVSLSIGDTCVFRVGNTETRTRPYTDVELCSGDL 175
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ GG SR +HGV P G +T L GRLN+T R
Sbjct: 176 FVLGGPSRFAYHGV----PKVREGTGDPDTGLASGRLNITMR 213
>gi|256825969|ref|YP_003149929.1| alkylated DNA repair protein [Kytococcus sedentarius DSM 20547]
gi|256689362|gb|ACV07164.1| alkylated DNA repair protein [Kytococcus sedentarius DSM 20547]
Length = 228
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 24/222 (10%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG + +L +Q +VR + GP ++P G ++ + M+ G W +
Sbjct: 22 PGCHWVPGWLDAGQQAWVVRQYRRWAAGPVPAHRPAVR-GGRMSVTMVPFGWVW--TSAG 78
Query: 298 YGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFY 357
Y + + D P +P +L +R++ V+ D +PD+ +VN Y
Sbjct: 79 YARTGEQD-AAPLPVPDWMVRLYRRAV------------VATGFDGWAEAAPDVALVNHY 125
Query: 358 NTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLESGDVLI 416
+G+H+D DE + PVVS SVGD+ F +G E + LESGD+++
Sbjct: 126 RPDASMGMHRDADELTEA-----PVVSLSVGDACTFRFGSTETRTRPWTDIRLESGDLVV 180
Query: 417 FGGESRHVFHGVSSINPNSA--PGALLENTMLRPGRLNLTFR 456
FGG +R FHGV I+P +A A + PGRLN+T R
Sbjct: 181 FGGPARRAFHGVPRIHPGTAGPQVAAAQAEAELPGRLNITLR 222
>gi|145294267|ref|YP_001137088.1| hypothetical protein cgR_0223 [Corynebacterium glutamicum R]
gi|417971478|ref|ZP_12612402.1| hypothetical protein CgS9114_10667 [Corynebacterium glutamicum
S9114]
gi|140844187|dbj|BAF53186.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044222|gb|EGV39902.1| hypothetical protein CgS9114_10667 [Corynebacterium glutamicum
S9114]
Length = 230
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 23/224 (10%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGK----GPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
G+V L ++L + EQ +V ++L + P +P G ++ + M+ LG W
Sbjct: 22 GVVHLPNFLGLAEQKALVAQARDLAREVVGTPLAMVRPKLKSG-QMSVHMLHLGKYWASN 80
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y VDG +P F L R AL+ S ++++ A + +V
Sbjct: 81 PYRY--VDVVDGFPVPPLPDSFVDLAHR------ALLSAGSLSNSLQSWSEAYRAEAALV 132
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGD 413
N+Y+ +G+HQD +E + PV+S S+GD+ F G + NK + L SGD
Sbjct: 133 NYYSPDASMGMHQDANEESEA-----PVISLSIGDTGIFRLGGTLNRNKPWTDIPLMSGD 187
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++FGG +R FHG+ I N+AP L+ GR+N+T RQ
Sbjct: 188 LIVFGGANRRAFHGIPFIEANTAPA----GCGLKEGRINITIRQ 227
>gi|260428731|ref|ZP_05782708.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citreicella sp.
SE45]
gi|260419354|gb|EEX12607.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citreicella sp.
SE45]
Length = 207
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 97/208 (46%), Gaps = 33/208 (15%)
Query: 251 EQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDWDPQTRKYG-KKRQVDGCE 308
++ L+ R+ L P YQP G K+ +RM G W R Y + R DG +
Sbjct: 28 QETLVARLRDCLRIAP--LYQPVTPRGQKMSVRMSAAGRFGWVTDRRGYRYEPRHPDGMD 85
Query: 309 PSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQD 368
IP E ++ + VS A +P+ C++N+Y R+GLHQD
Sbjct: 86 WPPIPDE--------------VLAIWETVSGC-----ARAPECCLINWYGEGARMGLHQD 126
Query: 369 RDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGV 428
RDE+ +S PVVS S+GD F G+ E V L SGDV++ GGE+R HGV
Sbjct: 127 RDEADFSC----PVVSVSLGDEGLFRMGNTERGGSTESVWLRSGDVVVMGGEARLRHHGV 182
Query: 429 SSINPNSAPGALLENTMLRPGRLNLTFR 456
I S+ + + GR+NLT R
Sbjct: 183 DRIRFGSS------TLLPQGGRINLTLR 204
>gi|163757493|ref|ZP_02164582.1| alkylated DNA repair protein [Hoeflea phototrophica DFL-43]
gi|162284995|gb|EDQ35277.1| alkylated DNA repair protein [Hoeflea phototrophica DFL-43]
Length = 202
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 86/185 (46%), Gaps = 34/185 (18%)
Query: 277 GAKLRLRMM-CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKM 333
G L +RM C L W D +Y V G +P+ K L E+
Sbjct: 45 GKPLSVRMTNCGTLGWVSDKAGYRYQDSHPVSGAPWPPVPNRLKALWADLTGESRP---- 100
Query: 334 DSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEF 393
P C++N+Y+ S R+GLHQDRDES +S PV+S S+GD+ F
Sbjct: 101 ---------------PQACLINYYDVSARMGLHQDRDESDFSA----PVLSVSLGDACLF 141
Query: 394 LYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP-GRLN 452
G LESGDV+I GGESR FHGV I P + +T+L+ GR+N
Sbjct: 142 RIGGTERGQPTRSFRLESGDVVILGGESRLAFHGVDRIYP-------MTSTLLKDGGRIN 194
Query: 453 LTFRQ 457
LT R+
Sbjct: 195 LTLRR 199
>gi|217979907|ref|YP_002364054.1| 2OG-Fe(II) oxygenase [Methylocella silvestris BL2]
gi|217505283|gb|ACK52692.1| 2OG-Fe(II) oxygenase [Methylocella silvestris BL2]
Length = 216
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 65/111 (58%), Gaps = 10/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
L P C+VNFY R+GLHQD DE +S PVVS S+GD A F YG + ++
Sbjct: 110 LPPQACLVNFYGAEARMGLHQDADEGDFSA----PVVSISLGDEALFRYGGQNRSDPTRS 165
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V L SGDV++ GG SR FHGV I P ++ LL+ GR+NLT R+
Sbjct: 166 VRLRSGDVIVLGGPSRRAFHGVDRIFPGTS--ELLQGG----GRINLTLRR 210
>gi|421081230|ref|ZP_15542144.1| Alkylated DNA repair protein AlkB [Pectobacterium wasabiae CFBP
3304]
gi|401704240|gb|EJS94449.1| Alkylated DNA repair protein AlkB [Pectobacterium wasabiae CFBP
3304]
Length = 218
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 36/247 (14%)
Query: 215 NFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGP-GGFYQPG 273
NF + + R+ WT L PG +L+ + IL+ + + P PG
Sbjct: 2 NFDLFADEAPRR---WTE--TLAPGAAILRGHAYDDAPILLAALQTVIAHAPLRNMITPG 56
Query: 274 YNDGAKLRLRMM-CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHAL 330
G + + M C L W D Q +Y + + G +P F +L +++
Sbjct: 57 ---GFVMSVAMSNCGQLGWVTDEQGYRYTSRDPLSGEAWPAMPEAFSRLAKQAAG----- 108
Query: 331 IKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDS 390
D+ ++ E PD C++N Y+ R+ LHQD++E + P+VS S+G S
Sbjct: 109 ---DAGFADFE-------PDACLINRYDVGTRMSLHQDKNERDFRQ----PIVSVSLGLS 154
Query: 391 AEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGR 450
A FL+G ++KA++V L GDV+++GGESR FHG+ + S P + + R
Sbjct: 155 ATFLFGGMVRSDKAQRVPLTHGDVVVWGGESRLYFHGILPLKSGSVPEGMPDEC-----R 209
Query: 451 LNLTFRQ 457
NLTFR+
Sbjct: 210 FNLTFRK 216
>gi|372279456|ref|ZP_09515492.1| alkylated DNA repair protein [Oceanicola sp. S124]
Length = 203
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 64/108 (59%), Gaps = 10/108 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VNFY R+GLHQDRDE+ + G PV+S S+GD F G+E K E +
Sbjct: 103 PDCCLVNFYREGARMGLHQDRDEADF----GYPVLSVSLGDDGLFRIGNETRGGKTESIW 158
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L+SGDV + GG +R + HGV I P S+ + + GR+NLT R
Sbjct: 159 LQSGDVAVMGGAARLLHHGVDRIRPGSS------TLLAQGGRINLTCR 200
>gi|441521564|ref|ZP_21003223.1| putative alkylated DNA repair protein [Gordonia sihwensis NBRC
108236]
gi|441458787|dbj|GAC61184.1| putative alkylated DNA repair protein [Gordonia sihwensis NBRC
108236]
Length = 186
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 25/180 (13%)
Query: 279 KLRLRMMCLGLDWDPQTRKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKV 337
++ +R +CLG W P +Y + V+G P +L +++++ A D
Sbjct: 24 RMSVRTVCLGWHWRPY--RYSRDAVDVNGRRVLGFPDWMVRLGRQALTAAG-----DPSA 76
Query: 338 SNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD 397
+PD +VN+Y+ R+G+HQDRDE PVVS S+GD+A F +G+
Sbjct: 77 ER-------YTPDTALVNYYDAGARMGMHQDRDEVSRE-----PVVSLSIGDTARFRFGN 124
Query: 398 ERDANKAEKVL-LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ ++ + LESGD+ +FGG R +HGV I+P +AP ++ L GR+N+T R
Sbjct: 125 TENRSRPYRDFDLESGDLFVFGGPLRLAYHGVQRIHPGTAP----DDCGLAAGRINITMR 180
>gi|398830742|ref|ZP_10588923.1| alkylated DNA repair protein [Phyllobacterium sp. YR531]
gi|398213322|gb|EJM99915.1| alkylated DNA repair protein [Phyllobacterium sp. YR531]
Length = 204
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 69/110 (62%), Gaps = 10/110 (9%)
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
SP+ C++NFY+ + ++GLHQDRDE PVVS S+GD+ F +G ++ + +
Sbjct: 101 SPEACLINFYSEAAKMGLHQDRDEQNLQA----PVVSVSLGDTCLFRFGGTNRNDRTQSI 156
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGDV++ GGE R FHGV I P ++ LL+N+ GR+NLT R+
Sbjct: 157 KLSSGDVVVLGGEGRLAFHGVDRIYPGTS--TLLKNS----GRINLTLRR 200
>gi|146339598|ref|YP_001204646.1| alkylated DNA repair protein AlkB [Bradyrhizobium sp. ORS 278]
gi|146192404|emb|CAL76409.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. ORS 278]
Length = 219
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 104/226 (46%), Gaps = 31/226 (13%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW-- 291
+L PG +LL+ + E L+ I + P F + G ++ + M C L W
Sbjct: 20 LLAPGALLLRGFARPLETELLAAIEMITAQAP--FRRMVTPGGHQMSVAMTNCGALGWVT 77
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
D +Y G +P F+Q+ + + EA P +PD
Sbjct: 78 DRSGYRYDAVDPESGQPWPAMPPLFRQIAENAAREAG---------------FPGFAPDA 122
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y ++ LHQDRDE G P+VS S+G A FL+G R +K ++ L
Sbjct: 123 CLINRYEPGAKMSLHQDRDER----DVGAPIVSVSLGLPATFLFGGLRRTDKTQRYRLVH 178
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GG +R FHGV AP A E+ L R+NLTFR+
Sbjct: 179 GDVVVWGGPARLAFHGV-------APLADGEHARLGRRRINLTFRR 217
>gi|407784798|ref|ZP_11131947.1| alkylated DNA repair protein [Celeribacter baekdonensis B30]
gi|407204500|gb|EKE74481.1| alkylated DNA repair protein [Celeribacter baekdonensis B30]
Length = 203
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 12/110 (10%)
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
SP+ C+VNFY ++G+HQDRDE + G PVVS S+GD A F G K E V
Sbjct: 102 SPECCLVNFYGEGAKMGMHQDRDEMDF----GQPVVSISLGDEALFRVGQATRGGKTESV 157
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP-GRLNLTFR 456
L+SGDV++ GE+R ++HG+ I ++ T+LR GRLNLT R
Sbjct: 158 WLQSGDVVVMNGEARLLYHGIDRIKTGTS-------TLLRDGGRLNLTLR 200
>gi|50119851|ref|YP_049018.1| alkylated DNA repair protein [Pectobacterium atrosepticum SCRI1043]
gi|49610377|emb|CAG73821.1| alkylated DNA repair protein [Pectobacterium atrosepticum SCRI1043]
Length = 218
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 112/247 (45%), Gaps = 36/247 (14%)
Query: 215 NFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGP-GGFYQPG 273
NF + + R+ WT L PG V+L+ + L+ + + P PG
Sbjct: 2 NFDLFADEASRR---WTE--TLAPGAVILRGHAYDDAPALLAALQTVIACAPLRNMITPG 56
Query: 274 YNDGAKLRLRMM-CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHAL 330
G + + M C L W D Q +Y + G +P F L +++ SEA
Sbjct: 57 ---GFVMSVAMSNCGQLGWVTDEQGYRYTSHDPLSGEAWPAMPEAFSLLAKQAASEAG-- 111
Query: 331 IKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDS 390
PD C++N Y+ R+ LHQD++E + P+VS S+G S
Sbjct: 112 -------------FADFEPDACLINRYDVGTRMSLHQDKNERDFHQ----PIVSVSLGLS 154
Query: 391 AEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGR 450
A FL+G ++KA++V L GDV+++GGESR FHG+ + + P + + R
Sbjct: 155 ATFLFGGMVRSDKAQRVPLTHGDVVVWGGESRLYFHGILPLKSGAVPEGMPDEC-----R 209
Query: 451 LNLTFRQ 457
NLTFR+
Sbjct: 210 FNLTFRK 216
>gi|158425908|ref|YP_001527200.1| alkylated DNA repair protein [Azorhizobium caulinodans ORS 571]
gi|158332797|dbj|BAF90282.1| alkylated DNA repair protein [Azorhizobium caulinodans ORS 571]
Length = 266
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 67/112 (59%), Gaps = 10/112 (8%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
A+ P+ C+VN+Y R+GLHQDRDE+ +S PV+S S+GD+A F G E +
Sbjct: 161 AVPPEACLVNWYAPDARMGLHQDRDEADFSA----PVLSVSLGDTAVFRIGGEARTDSTR 216
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ LESGDVL GG SR FHGV I P ++ +E GR+NLT R+
Sbjct: 217 SIRLESGDVLRLGGRSRLAFHGVDRILPGTSTLLGVE------GRINLTLRR 262
>gi|120555020|ref|YP_959371.1| 2OG-Fe(II) oxygenase [Marinobacter aquaeolei VT8]
gi|120324869|gb|ABM19184.1| DNA-N1-methyladenine dioxygenase [Marinobacter aquaeolei VT8]
Length = 216
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--DPQT 295
G+V+L+ + +Q L+ I Q + P F G ++ M C G L W D
Sbjct: 21 GVVVLRRHAVKHQQALMRDIEQVARQAP--FRHMKTPGGHQMSAAMTCCGPLGWVTDETG 78
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y + + G +P F L +S EA P PD C++N
Sbjct: 79 YRYQPQDPLSGLPWPAMPESFVSLACKSAREAG---------------FPGFDPDACLIN 123
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVL 415
Y ++GLHQD+DE ++ P+VS S+G F +G + +++ ++LLE GDV+
Sbjct: 124 RYQPGAKMGLHQDKDEKDFAW----PIVSVSLGLPIVFQFGGLKRSDRPARILLEHGDVV 179
Query: 416 IFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++GG +R +HGV ++ E+ + R NLTFR+
Sbjct: 180 VWGGPARLRYHGVLTLKAG-------EHPVTGSARYNLTFRK 214
>gi|418246825|ref|ZP_12873216.1| DNA repair protein [Corynebacterium glutamicum ATCC 14067]
gi|354509167|gb|EHE82105.1| DNA repair protein [Corynebacterium glutamicum ATCC 14067]
Length = 161
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 18/175 (10%)
Query: 284 MMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
M+ LG W T +Y VDG +P F L R AL+ S ++++
Sbjct: 1 MLNLGKHWATNTYRY--VDAVDGFPVPPLPDSFVNLAHR------ALLSAGSLSNSLQSW 52
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
A + +VN+Y+ +G+HQD +E + PVVS S+GD+ F G + NK
Sbjct: 53 SEAYRAEAALVNYYSPDASMGMHQDANEESEA-----PVVSLSIGDTGIFRLGGTLNRNK 107
Query: 404 A-EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ L SGD+++FGG R FHG+ SI N+AP L+ GR+N+T RQ
Sbjct: 108 PWTDIPLMSGDLIVFGGAHRRAFHGIPSIEANTAPAG----CGLKEGRINITIRQ 158
>gi|373248709|emb|CCD31822.1| alkylated DNA repair protein [Streptomyces albus subsp. albus]
Length = 223
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L Q ++ C+ + P G G + R +CLG W P R
Sbjct: 18 PGAVHVPDWLGTGRQHELLDACRGWARPPAGLRTVHVPGGGTMSARQVCLGRHWVPY-RY 76
Query: 298 YGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFY 357
G DG P +L Q +++ A+ D+ +VNFY
Sbjct: 77 TGTAVDGDGAPVKPFPGWLDELAQSALAAAYGEAAEPDPY------------DVALVNFY 124
Query: 358 NTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGDVLI 416
R+G+H+D +E + G PVVS S+GDS F +G+ + + + V L SGD+ +
Sbjct: 125 AEGTRMGMHRDAEE-----ESGAPVVSLSLGDSCVFRFGNPENRGRPYQDVELRSGDLFV 179
Query: 417 FGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
FGG +R +HGV + +S P L GRLN+T R
Sbjct: 180 FGGPARLAYHGVPRVKAHSGPPGLGLT-----GRLNITLR 214
>gi|440703309|ref|ZP_20884247.1| putative alkylated DNA repair protein AlkB [Streptomyces
turgidiscabies Car8]
gi|440275019|gb|ELP63479.1| putative alkylated DNA repair protein AlkB [Streptomyces
turgidiscabies Car8]
Length = 216
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 101/223 (45%), Gaps = 28/223 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L Q ++ C++ + P G G + R +CLG W P
Sbjct: 16 IAPGAVHVPDWLDAGRQRELLDACRDWARPPAGLRTVRTPGGGTMTARQVCLGRHWYP-- 73
Query: 296 RKYGKKRQV-DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
YG V DG V P F + + EA A DS L DI ++
Sbjct: 74 --YGYANTVVDGDGSPVKP--FPEWLGALGREAAAAAGFDSD----------LDYDIALI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLESGD 413
NFY+ R+G+H+D DE K PVVS S+GD+ F +G+ + V L SGD
Sbjct: 120 NFYDADARMGMHRDSDE-----KSDAPVVSLSLGDTCLFRFGNTATRTRPYTDVELRSGD 174
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ +FGG SR HGV + ++AP L GRLN+T R
Sbjct: 175 LFVFGGASRLAHHGVPRVYQSTAPTELGLT-----GRLNITLR 212
>gi|71726056|gb|AAZ39179.1| alkylated DNA repair protein AlkB [Janthinobacterium lividum]
Length = 220
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 11/113 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P +PD C+VN Y R+ LHQDRDE ++ P+VS S+G A FL+G A+KA
Sbjct: 117 PGFAPDACLVNRYAPGARMALHQDRDECDFTA----PIVSVSLGLPATFLFGGAERADKA 172
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++ L GDV+++GG R FHGV+ + E+ +L P R+NLTFR+
Sbjct: 173 ARIGLLHGDVVVWGGTDRLRFHGVAPLKEG-------EHAVLGPQRINLTFRK 218
>gi|357024847|ref|ZP_09086984.1| alkylated DNA repair protein [Mesorhizobium amorphae CCNWGS0123]
gi|355543247|gb|EHH12386.1| alkylated DNA repair protein [Mesorhizobium amorphae CCNWGS0123]
Length = 205
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 85/185 (45%), Gaps = 33/185 (17%)
Query: 277 GAKLRLRMM-CLGLDW---DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIK 332
G ++ +RM C L W Q +Y G IP QL Q + H
Sbjct: 45 GKEMSVRMTNCGPLGWVTDKGQGYRYQGAHPATGLPWPPIPDALLQLWQEVAAYPH---- 100
Query: 333 MDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAE 392
P C+VNFY++ ++GLHQDRDE+ +S PVVS S+GD
Sbjct: 101 ---------------PPQACLVNFYSSEAKMGLHQDRDEADFSA----PVVSVSLGDDCL 141
Query: 393 FLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLN 452
F G L SGDV++ GGE R FHGV I P+++ ALL+N GR+N
Sbjct: 142 FRVGQTTRDGATRSFRLRSGDVVVLGGEGRLCFHGVDRIYPSTS--ALLKNG----GRIN 195
Query: 453 LTFRQ 457
LT R+
Sbjct: 196 LTLRR 200
>gi|17989084|ref|NP_541717.1| alkylated DNA repair protein AlkB [Brucella melitensis bv. 1 str.
16M]
gi|225686325|ref|YP_002734297.1| alkylated DNA repair protein AlkB [Brucella melitensis ATCC 23457]
gi|256262538|ref|ZP_05465070.1| alkylated DNA repair protein alkB [Brucella melitensis bv. 2 str.
63/9]
gi|260564629|ref|ZP_05835114.1| alkylated DNA repair protein alkB [Brucella melitensis bv. 1 str.
16M]
gi|265989849|ref|ZP_06102406.1| alkylated DNA repair protein alkB [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993043|ref|ZP_06105600.1| alkylated DNA repair protein alkB [Brucella melitensis bv. 3 str.
Ether]
gi|384213042|ref|YP_005602125.1| alkylated DNA repair protein AlkB [Brucella melitensis M5-90]
gi|384410143|ref|YP_005598763.1| alkylated DNA repair protein AlkB [Brucella melitensis M28]
gi|384446668|ref|YP_005660886.1| alkylated DNA repair protein [Brucella melitensis NI]
gi|6759911|gb|AAF28103.1|AF148683_1 AlkB [Brucella melitensis]
gi|17984929|gb|AAL53981.1| alkylated DNA repair protein alkb [Brucella melitensis bv. 1 str.
16M]
gi|225642430|gb|ACO02343.1| alkylated DNA repair protein AlkB [Brucella melitensis ATCC 23457]
gi|260152272|gb|EEW87365.1| alkylated DNA repair protein alkB [Brucella melitensis bv. 1 str.
16M]
gi|262763913|gb|EEZ09945.1| alkylated DNA repair protein alkB [Brucella melitensis bv. 3 str.
Ether]
gi|263000518|gb|EEZ13208.1| alkylated DNA repair protein alkB [Brucella melitensis bv. 1 str.
Rev.1]
gi|263092317|gb|EEZ16570.1| alkylated DNA repair protein alkB [Brucella melitensis bv. 2 str.
63/9]
gi|326410690|gb|ADZ67754.1| alkylated DNA repair protein AlkB [Brucella melitensis M28]
gi|326553982|gb|ADZ88621.1| alkylated DNA repair protein AlkB [Brucella melitensis M5-90]
gi|349744665|gb|AEQ10207.1| alkylated DNA repair protein [Brucella melitensis NI]
Length = 212
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 106/237 (44%), Gaps = 46/237 (19%)
Query: 231 TREGILRPGMVLLKHY-LTIREQIL--IVRICQELG----KGPGGFYQPGYNDGAKLRLR 283
TRE I+ PG VLL+ + L E IL + R+C PGG+ ++ +
Sbjct: 10 TRE-IMAPGAVLLRGFALACEESILSAVARVCAAAPFRHMTTPGGY---------RMSVA 59
Query: 284 MM-CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
M C + W D +Y G +P F L Q + +A
Sbjct: 60 MTNCGPVGWVTDRTGYRYSPADPETGKPWPSMPDTFLALAQDAARQAG------------ 107
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
P +PD C++N Y RL LHQD+DE +S P+VS S+G A F +G +
Sbjct: 108 ---YPDFTPDACLINRYKPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGMKR 160
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ K +L GDV+++GG SR +HG+ + E+ L P RLNLTFR+
Sbjct: 161 TDPITKYILHHGDVVVWGGPSRLFYHGILPLKSG-------EHERLGPFRLNLTFRK 210
>gi|56694970|ref|YP_165315.1| alkylated DNA repair protein [Ruegeria pomeroyi DSS-3]
gi|56676707|gb|AAV93373.1| alkylated DNA repair protein, putative [Ruegeria pomeroyi DSS-3]
Length = 198
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 88/192 (45%), Gaps = 35/192 (18%)
Query: 269 FYQPGYNDGAKLRLRMMCLG-LDWDPQTRKYGKKRQVD---GCEPSVIPSEFKQLVQRSM 324
+ P +G L +RM G L W T K G + Q G IP E L
Sbjct: 35 LFTPTMPNGKPLSVRMTSAGSLGW--VTDKGGYRYQPTHPKGMAWPAIPPEVLDL----- 87
Query: 325 SEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVS 384
H + D +PD C++N+Y R+GLHQDRDE+ + PVVS
Sbjct: 88 --WHGVTGQDR------------APDCCLINYYGEGARMGLHQDRDEADLTW----PVVS 129
Query: 385 FSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENT 444
S+GD A F G+ K E V L SGDV++ GG +R ++HG+ I S+
Sbjct: 130 LSLGDDALFRIGNTSRGGKTESVWLNSGDVVVMGGPARLIYHGIDRIRFGSS------RL 183
Query: 445 MLRPGRLNLTFR 456
+ + GRLNLT R
Sbjct: 184 LPKGGRLNLTLR 195
>gi|227329148|ref|ZP_03833172.1| alkylated DNA repair protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 218
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 87/174 (50%), Gaps = 26/174 (14%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D + +Y + + G +P F +L +++ SEA
Sbjct: 67 CGPLGWVTDERGYRYTAQDPLSGEPWPAMPEAFSRLAKQAASEAG--------------- 111
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
PD C++N Y+ R+ LHQD++E + P+VS S+G SA FL+G ++K
Sbjct: 112 FADFEPDACLINRYDVGTRMSLHQDKNERDFHQ----PIVSVSLGLSATFLFGGMARSDK 167
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
A++V L GDV+++GGESR FHG+ + S P + + R NLTFR+
Sbjct: 168 AQRVPLTHGDVVVWGGESRLYFHGILPLKSGSVPEGMSDEC-----RFNLTFRK 216
>gi|260544840|ref|ZP_05820661.1| alkylated DNA repair protein AlkB [Brucella abortus NCTC 8038]
gi|261217152|ref|ZP_05931433.1| 2OG-Fe(II) oxygenase superfamily [Brucella ceti M13/05/1]
gi|261313399|ref|ZP_05952596.1| 2OG-Fe(II) oxygenase superfamily [Brucella pinnipedialis
M163/99/10]
gi|265986636|ref|ZP_06099193.1| alkylated DNA repair protein AlkB [Brucella pinnipedialis
M292/94/1]
gi|260098111|gb|EEW81985.1| alkylated DNA repair protein AlkB [Brucella abortus NCTC 8038]
gi|260922241|gb|EEX88809.1| 2OG-Fe(II) oxygenase superfamily [Brucella ceti M13/05/1]
gi|261302425|gb|EEY05922.1| 2OG-Fe(II) oxygenase superfamily [Brucella pinnipedialis
M163/99/10]
gi|264658833|gb|EEZ29094.1| alkylated DNA repair protein AlkB [Brucella pinnipedialis
M292/94/1]
Length = 211
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 106/237 (44%), Gaps = 46/237 (19%)
Query: 231 TREGILRPGMVLLKHY-LTIREQIL--IVRICQELG----KGPGGFYQPGYNDGAKLRLR 283
TRE I+ PG VLL+ + L E IL + R+C PGG+ ++ +
Sbjct: 10 TRE-IMAPGAVLLRGFALACEESILSAVARVCAAAPFRHMTTPGGY---------RMSVA 59
Query: 284 MM-CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
M C + W D +Y G +P F L Q + +A
Sbjct: 60 MTNCGPVGWVTDRTGYRYSPADPETGKPWPSMPDTFLALAQDAARQAG------------ 107
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
P +PD C++N Y RL LHQD+DE +S P+VS S+G A F +G +
Sbjct: 108 ---YPDFTPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGMKR 160
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ K +L GDV+++GG SR +HG+ + E+ L P RLNLTFR+
Sbjct: 161 TDPITKYILHHGDVVVWGGPSRLFYHGILPLKSG-------EHERLGPFRLNLTFRK 210
>gi|261220367|ref|ZP_05934648.1| AlkB [Brucella ceti B1/94]
gi|260918951|gb|EEX85604.1| AlkB [Brucella ceti B1/94]
Length = 212
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 106/237 (44%), Gaps = 46/237 (19%)
Query: 231 TREGILRPGMVLLKHY-LTIREQIL--IVRICQELG----KGPGGFYQPGYNDGAKLRLR 283
TRE I+ PG VLL+ + L E IL + R+C PGG+ ++ +
Sbjct: 10 TRE-IMAPGAVLLRGFALACEESILSAVARVCAAAPFRHMTTPGGY---------RMSVA 59
Query: 284 MM-CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
M C + W D +Y G +P F L Q + +A
Sbjct: 60 MTNCGPVGWVTDRTGYRYSPADPETGKPWPSMPDTFLTLAQDAARQAG------------ 107
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
P +PD C++N Y RL LHQD+DE +S P+VS S+G A F +G +
Sbjct: 108 ---YPDFTPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGMKR 160
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ K +L GDV+++GG SR +HG+ + E+ L P RLNLTFR+
Sbjct: 161 TDPITKYILHHGDVVVWGGPSRLFYHGILPLKSG-------EHERLGPFRLNLTFRK 210
>gi|265996285|ref|ZP_06108842.1| alkylated DNA repair protein AlkB [Brucella ceti M490/95/1]
gi|262550582|gb|EEZ06743.1| alkylated DNA repair protein AlkB [Brucella ceti M490/95/1]
Length = 211
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 106/237 (44%), Gaps = 46/237 (19%)
Query: 231 TREGILRPGMVLLKHY-LTIREQIL--IVRICQELG----KGPGGFYQPGYNDGAKLRLR 283
TRE I+ PG VLL+ + L E IL + R+C PGG+ ++ +
Sbjct: 10 TRE-IMAPGAVLLRGFALACEESILSAVARVCAAAPFRHMTTPGGY---------RMSVA 59
Query: 284 MM-CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
M C + W D +Y G +P F L Q + +A
Sbjct: 60 MTNCGPVGWVTDRTGYRYSPADPETGKPWPSMPDTFLTLAQDAARQAG------------ 107
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
P +PD C++N Y RL LHQD+DE +S P+VS S+G A F +G +
Sbjct: 108 ---YPDFTPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGMKR 160
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ K +L GDV+++GG SR +HG+ + E+ L P RLNLTFR+
Sbjct: 161 TDPITKYILHHGDVVVWGGPSRLFYHGILPLKSG-------EHERLGPFRLNLTFRK 210
>gi|23500280|ref|NP_699720.1| alkylated DNA repair protein AlkB [Brucella suis 1330]
gi|62317604|ref|YP_223457.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
9-941]
gi|83269587|ref|YP_418878.1| 2OG-Fe(II) oxygenase [Brucella melitensis biovar Abortus 2308]
gi|161620597|ref|YP_001594483.1| alkylated DNA repair protein AlkB [Brucella canis ATCC 23365]
gi|163844692|ref|YP_001622347.1| hypothetical protein BSUIS_B0529 [Brucella suis ATCC 23445]
gi|189022857|ref|YP_001932598.1| 2OG-Fe(II) oxygenase [Brucella abortus S19]
gi|225628968|ref|ZP_03787002.1| alkylated DNA repair protein [Brucella ceti str. Cudo]
gi|237817154|ref|ZP_04596146.1| 2OG-Fe(II) oxygenase superfamily protein [Brucella abortus str.
2308 A]
gi|256015312|ref|YP_003105321.1| alkylated DNA repair protein AlkB [Brucella microti CCM 4915]
gi|260568174|ref|ZP_05838643.1| AlkB protein [Brucella suis bv. 4 str. 40]
gi|260756700|ref|ZP_05869048.1| alkylated DNA repair protein alkB [Brucella abortus bv. 6 str. 870]
gi|260760131|ref|ZP_05872479.1| alkylated DNA repair protein [Brucella abortus bv. 4 str. 292]
gi|260763369|ref|ZP_05875701.1| 2OG-Fe(II) oxygenase superfamily protein [Brucella abortus bv. 2
str. 86/8/59]
gi|260882516|ref|ZP_05894130.1| AlkB [Brucella abortus bv. 9 str. C68]
gi|261215988|ref|ZP_05930269.1| alkylated DNA repair protein alkB [Brucella abortus bv. 3 str.
Tulya]
gi|261319363|ref|ZP_05958560.1| 2OG-Fe(II) oxygenase, partial [Brucella pinnipedialis B2/94]
gi|261320023|ref|ZP_05959220.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261750246|ref|ZP_05993955.1| alkylated DNA repair protein [Brucella suis bv. 5 str. 513]
gi|261753518|ref|ZP_05997227.1| alkylated DNA repair protein [Brucella suis bv. 3 str. 686]
gi|261756688|ref|ZP_06000397.1| alkylated DNA repair protein [Brucella sp. F5/99]
gi|294853669|ref|ZP_06794341.1| alkylated DNA repair protein [Brucella sp. NVSL 07-0026]
gi|297249648|ref|ZP_06933349.1| alkylated DNA repair protein [Brucella abortus bv. 5 str. B3196]
gi|340792263|ref|YP_004757727.1| alkylated DNA repair protein AlkB [Brucella pinnipedialis B2/94]
gi|376271247|ref|YP_005114292.1| alkylated DNA repair protein [Brucella abortus A13334]
gi|376276767|ref|YP_005152828.1| alkylated DNA repair protein [Brucella canis HSK A52141]
gi|376278501|ref|YP_005108534.1| alkylated DNA repair protein AlkB [Brucella suis VBI22]
gi|384223063|ref|YP_005614228.1| alkylated DNA repair protein AlkB [Brucella suis 1330]
gi|423168499|ref|ZP_17155201.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI435a]
gi|423172067|ref|ZP_17158741.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI474]
gi|423174202|ref|ZP_17160872.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI486]
gi|423176079|ref|ZP_17162745.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI488]
gi|423181496|ref|ZP_17168136.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI010]
gi|423184629|ref|ZP_17171265.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI016]
gi|423187781|ref|ZP_17174394.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI021]
gi|423190200|ref|ZP_17176809.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI259]
gi|6759906|gb|AAF28100.1|AF148681_1 AlkB [Brucella abortus]
gi|6759909|gb|AAF28102.1|AF148682_2 AlkB [Brucella abortus]
gi|23463889|gb|AAN33725.1| alkylated DNA repair protein AlkB [Brucella suis 1330]
gi|62197797|gb|AAX76096.1| AlkB, alkylated DNA repair protein [Brucella abortus bv. 1 str.
9-941]
gi|82939861|emb|CAJ12870.1| 2OG-Fe(II) oxygenase superfamily [Brucella melitensis biovar
Abortus 2308]
gi|161337408|gb|ABX63712.1| Alkylated DNA repair protein AlkB [Brucella canis ATCC 23365]
gi|163675415|gb|ABY39525.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189021431|gb|ACD74152.1| 2OG-Fe(II) oxygenase superfamily [Brucella abortus S19]
gi|225616814|gb|EEH13862.1| alkylated DNA repair protein [Brucella ceti str. Cudo]
gi|237787967|gb|EEP62183.1| 2OG-Fe(II) oxygenase superfamily protein [Brucella abortus str.
2308 A]
gi|255997972|gb|ACU49659.1| alkylated DNA repair protein AlkB [Brucella microti CCM 4915]
gi|260154839|gb|EEW89920.1| AlkB protein [Brucella suis bv. 4 str. 40]
gi|260670449|gb|EEX57389.1| alkylated DNA repair protein [Brucella abortus bv. 4 str. 292]
gi|260673790|gb|EEX60611.1| 2OG-Fe(II) oxygenase superfamily protein [Brucella abortus bv. 2
str. 86/8/59]
gi|260676808|gb|EEX63629.1| alkylated DNA repair protein alkB [Brucella abortus bv. 6 str. 870]
gi|260872044|gb|EEX79113.1| AlkB [Brucella abortus bv. 9 str. C68]
gi|260917595|gb|EEX84456.1| alkylated DNA repair protein alkB [Brucella abortus bv. 3 str.
Tulya]
gi|261292713|gb|EEX96209.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261298586|gb|EEY02083.1| 2OG-Fe(II) oxygenase [Brucella pinnipedialis B2/94]
gi|261736672|gb|EEY24668.1| alkylated DNA repair protein [Brucella sp. F5/99]
gi|261739999|gb|EEY27925.1| alkylated DNA repair protein [Brucella suis bv. 5 str. 513]
gi|261743271|gb|EEY31197.1| alkylated DNA repair protein [Brucella suis bv. 3 str. 686]
gi|294819324|gb|EFG36324.1| alkylated DNA repair protein [Brucella sp. NVSL 07-0026]
gi|297173517|gb|EFH32881.1| alkylated DNA repair protein [Brucella abortus bv. 5 str. B3196]
gi|340560722|gb|AEK55959.1| alkylated DNA repair protein AlkB [Brucella pinnipedialis B2/94]
gi|343384511|gb|AEM20002.1| alkylated DNA repair protein AlkB [Brucella suis 1330]
gi|358259939|gb|AEU07672.1| alkylated DNA repair protein AlkB [Brucella suis VBI22]
gi|363402419|gb|AEW19388.1| alkylated DNA repair protein [Brucella abortus A13334]
gi|363405141|gb|AEW15435.1| alkylated DNA repair protein [Brucella canis HSK A52141]
gi|374536489|gb|EHR08009.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI474]
gi|374538992|gb|EHR10499.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI435a]
gi|374540203|gb|EHR11705.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI486]
gi|374546086|gb|EHR17546.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI010]
gi|374546929|gb|EHR18388.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI016]
gi|374553961|gb|EHR25374.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI021]
gi|374554681|gb|EHR26091.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI488]
gi|374556240|gb|EHR27645.1| alkylated DNA repair protein AlkB [Brucella abortus bv. 1 str.
NI259]
Length = 212
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 106/237 (44%), Gaps = 46/237 (19%)
Query: 231 TREGILRPGMVLLKHY-LTIREQIL--IVRICQELG----KGPGGFYQPGYNDGAKLRLR 283
TRE I+ PG VLL+ + L E IL + R+C PGG+ ++ +
Sbjct: 10 TRE-IMAPGAVLLRGFALACEESILSAVARVCAAAPFRHMTTPGGY---------RMSVA 59
Query: 284 MM-CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
M C + W D +Y G +P F L Q + +A
Sbjct: 60 MTNCGPVGWVTDRTGYRYSPADPETGKPWPSMPDTFLALAQDAARQAG------------ 107
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
P +PD C++N Y RL LHQD+DE +S P+VS S+G A F +G +
Sbjct: 108 ---YPDFTPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGMKR 160
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ K +L GDV+++GG SR +HG+ + E+ L P RLNLTFR+
Sbjct: 161 TDPITKYILHHGDVVVWGGPSRLFYHGILPLKSG-------EHERLGPFRLNLTFRK 210
>gi|149912943|ref|ZP_01901477.1| alkylated DNA repair protein, putative [Roseobacter sp. AzwK-3b]
gi|149813349|gb|EDM73175.1| alkylated DNA repair protein, putative [Roseobacter sp. AzwK-3b]
Length = 202
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
+PD C+VN Y ++G+HQDRDE+ + G PV+S S+GD A F G K E +
Sbjct: 101 APDCCLVNVYREGAKMGMHQDRDEADF----GWPVLSVSLGDDALFRVGGTTRGGKTESI 156
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L SGDV++ GG++R ++HG+ I P S+ LL GR+NLT R
Sbjct: 157 WLGSGDVVVMGGDARLIYHGIDRIRPGSS--TLLTGG----GRINLTLR 199
>gi|89052704|ref|YP_508155.1| DNA-N1-methyladenine dioxygenase [Jannaschia sp. CCS1]
gi|88862253|gb|ABD53130.1| DNA-N1-methyladenine dioxygenase [Jannaschia sp. CCS1]
Length = 216
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 90/190 (47%), Gaps = 31/190 (16%)
Query: 269 FYQPGYNDGAKLRLRMMCLG-LDWDPQTRKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSE 326
Y+P G K+ +RM G W R Y R DG + IP
Sbjct: 53 LYRPETRTGRKMSVRMTSAGTYGWISDRRGYRYDRCHPDGQDWPPIPP------------ 100
Query: 327 AHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFS 386
+++ VS V A P C++N+Y+ ++G+HQDRDE + + PVVS S
Sbjct: 101 --MALEIWRAVSGV-----AQDPQSCLINYYDAGAKMGMHQDRDEGDFDM----PVVSVS 149
Query: 387 VGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTML 446
+GD A F G + K + V L+SGDV + GGE+R FHG+ I S+ LL N
Sbjct: 150 LGDEALFRVGGPKRGGKTQSVWLKSGDVAVMGGEARLNFHGIDRIRAGSS--TLLPNG-- 205
Query: 447 RPGRLNLTFR 456
GR+NLT R
Sbjct: 206 --GRINLTMR 213
>gi|265985482|ref|ZP_06098217.1| alkylated DNA repair protein AlkB [Brucella sp. 83/13]
gi|306839680|ref|ZP_07472483.1| alkylated DNA repair protein AlkB [Brucella sp. NF 2653]
gi|264664074|gb|EEZ34335.1| alkylated DNA repair protein AlkB [Brucella sp. 83/13]
gi|306405260|gb|EFM61536.1| alkylated DNA repair protein AlkB [Brucella sp. NF 2653]
Length = 212
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 102/230 (44%), Gaps = 32/230 (13%)
Query: 231 TREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGL 289
TRE IL PG VLL+ + E+ ++ + P F G ++ + M C +
Sbjct: 10 TRE-ILAPGAVLLRGFALACEESILTSVAGVCAAAP--FRHMTTPGGYRMSVAMTNCGPV 66
Query: 290 DW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPAL 347
W D +Y G +P F L Q + +A P
Sbjct: 67 GWVTDRTGYRYSPDDPETGKPWPSMPDTFLALAQDAARQAG---------------YPDF 111
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
+PD C++N Y RL LHQD+DE +S P+VS S+G A F +G + + K
Sbjct: 112 TPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGMKRTDPITKY 167
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+L GDV+++GG SR +HG+ + E+ L P RLNLTFR+
Sbjct: 168 ILHHGDVVVWGGPSRLFYHGILPLKSG-------EHERLGPFRLNLTFRK 210
>gi|319780219|ref|YP_004139695.1| 2OG-Fe(II) oxygenase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166107|gb|ADV09645.1| 2OG-Fe(II) oxygenase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 209
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C++NFY ++GLHQDRDE+ +S PVVS S+GD F G +
Sbjct: 102 PEACLINFYTADAKMGLHQDRDEADFSA----PVVSVSLGDDCLFRVGQTTRDGATKSFR 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+SGDV++ GGE R FHGV I P+++ ALL+N GR+NLT R+
Sbjct: 158 LQSGDVVVLGGEGRLCFHGVDRIYPSTS--ALLKNG----GRINLTLRR 200
>gi|261323219|ref|ZP_05962416.1| AlkB [Brucella neotomae 5K33]
gi|261299199|gb|EEY02696.1| AlkB [Brucella neotomae 5K33]
Length = 212
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 106/237 (44%), Gaps = 46/237 (19%)
Query: 231 TREGILRPGMVLLKHY-LTIREQIL--IVRICQELG----KGPGGFYQPGYNDGAKLRLR 283
TRE I+ PG VLL+ + L E IL + R+C PGG+ ++ +
Sbjct: 10 TRE-IMAPGAVLLRGFALACEESILSAVARVCAAAPFRHLTTPGGY---------RMSVA 59
Query: 284 MM-CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
M C + W D +Y G +P F L Q + +A
Sbjct: 60 MTNCGPVGWVTDRTGYRYSPADPETGKPWPSMPDTFLALAQDAARQAG------------ 107
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
P +PD C++N Y RL LHQD+DE +S P+VS S+G A F +G +
Sbjct: 108 ---YPDFTPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGMKR 160
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ K +L GDV+++GG SR +HG+ + E+ L P RLNLTFR+
Sbjct: 161 TDPITKYILHHGDVVVWGGPSRLFYHGILPLKSG-------EHERLGPFRLNLTFRK 210
>gi|375287673|ref|YP_005122214.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 3/99-5]
gi|371574962|gb|AEX38565.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 3/99-5]
Length = 165
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 93/182 (51%), Gaps = 24/182 (13%)
Query: 280 LRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSN 339
+ +M LG W+ + +Y + Q G E IP+ F + +A + +DS
Sbjct: 1 MSAHLMSLGKHWEYSSHQYVSEWQ--GQEVPDIPNNFLTQAYEAFEQA---VCLDS---- 51
Query: 340 VEDILPALSP---DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYG 396
D+ P S D +VN+Y +G+HQD E + PVVS S+G +A F G
Sbjct: 52 --DLAPWASDYRIDAALVNYYPPGSGMGMHQDVFE-----ESSAPVVSLSIGATAVFRAG 104
Query: 397 DERDANKA-EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTF 455
+ + NK + VLL SGD L+FGG SR +FHG+ I+ + P +N L GR+N+TF
Sbjct: 105 NSENRNKPWQDVLLLSGDALVFGGPSRKIFHGIKHIDDATVP----DNCGLEKGRINITF 160
Query: 456 RQ 457
RQ
Sbjct: 161 RQ 162
>gi|294675782|ref|YP_003576397.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodobacter
capsulatus SB 1003]
gi|294474602|gb|ADE83990.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodobacter
capsulatus SB 1003]
Length = 211
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
SP+ C+VNFY R+GLHQDRDE+ ++ PVVS S+GD F G+E + +
Sbjct: 110 SPECCLVNFYAEKARMGLHQDRDEADFAQ----PVVSISLGDDGLFRIGNETRGGATQSL 165
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L SGDVL+ GG +R ++HG+ I P ++ + + GR+NLT R
Sbjct: 166 WLRSGDVLVMGGAARLLYHGIDRIAPGTS------TLLPQGGRINLTLR 208
>gi|319950140|ref|ZP_08024076.1| alkylated DNA repair protein [Dietzia cinnamea P4]
gi|319436181|gb|EFV91365.1| alkylated DNA repair protein [Dietzia cinnamea P4]
Length = 225
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 105/226 (46%), Gaps = 22/226 (9%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKG--PGGFYQPGYNDGAKLRLRMMCLGLDWD 292
+L PG V + +++ +Q ++R C + P PG G ++ +R LG W
Sbjct: 14 LLGPGAVHVPDWMSREQQEYLLRACADWAAVAAPRSIVLPG---GGRMSVRTFSLGRHWT 70
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
P R D + IP + + R+ A + V D +PD
Sbjct: 71 PY-------RYDDDEDTPPIP----EWLVRAARTALTAAAAIDPRAAVLDGGDHYTPDAA 119
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKVLLES 411
+VN Y +GLHQDRDE+ + PVVSFS+GD+ F +G E V LES
Sbjct: 120 LVNLYGRGATMGLHQDRDEASLA-----PVVSFSLGDACTFRFGTPEHRGRPYTDVRLES 174
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GD+++FGG SR FHGV + ++AP E PGR+N+T R
Sbjct: 175 GDLVVFGGPSRMAFHGVPKVFDSTAPSWCREVLGAEPGRVNITLRM 220
>gi|306840556|ref|ZP_07473313.1| alkylated DNA repair protein AlkB [Brucella sp. BO2]
gi|306289461|gb|EFM60686.1| alkylated DNA repair protein AlkB [Brucella sp. BO2]
Length = 212
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 108/239 (45%), Gaps = 50/239 (20%)
Query: 231 TREGILRPGMVLLKHY-LTIREQIL--IVRICQELG----KGPGGFYQPGYNDGAKLRLR 283
TRE IL PG VLL+ + L E IL + RIC PGG+ ++ +
Sbjct: 10 TRE-ILAPGAVLLRGFALACEESILTAVARICAAAPFRHMTTPGGY---------RMSVA 59
Query: 284 MM-CLGLDWDPQTRKYGKKRQVDGCEP----SVIPSEFKQLVQRSMSEAHALIKMDSKVS 338
M C + W T + G + D E +P F L Q + +A
Sbjct: 60 MTNCGPVGW--VTDRTGYRYSPDDLETDKPWPPMPDTFLALAQDAARQAG---------- 107
Query: 339 NVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDE 398
P +PD C++N Y RL LHQD+DE +S P+VS S+G A F +G
Sbjct: 108 -----YPDFTPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGI 158
Query: 399 RDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ + K +L GDV+++GG SR +HG+ + E+ L P RLNLTFR+
Sbjct: 159 KRTDPITKYILHHGDVVVWGGPSRLFYHGILPLKSG-------EHERLGPFRLNLTFRK 210
>gi|13474252|ref|NP_105820.1| alkylated DNA repair protein [Mesorhizobium loti MAFF303099]
gi|14025004|dbj|BAB51606.1| alkylated DNA repair protein [Mesorhizobium loti MAFF303099]
Length = 213
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C++NFY ++GLHQDRDE+ +S PVVS S+GD F G +
Sbjct: 102 PEACLINFYTADAKMGLHQDRDEADFSA----PVVSVSLGDDCLFRVGQTTRDGATKSFR 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+SGDV++ GGE R FHGV I P+++ ALL+N GR+NLT R+
Sbjct: 158 LKSGDVVVLGGEGRLAFHGVDRIYPSTS--ALLKNG----GRINLTLRR 200
>gi|413932644|gb|AFW67195.1| hypothetical protein ZEAMMB73_974323 [Zea mays]
Length = 65
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 50/65 (76%)
Query: 394 LYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNL 453
++GD RD K KV LESGDVLIFGGESR +FHGV++ P +AP L + T LRPGRLNL
Sbjct: 1 MFGDVRDEEKISKVDLESGDVLIFGGESRLIFHGVNNTKPKTAPKWLTDETSLRPGRLNL 60
Query: 454 TFRQY 458
TFRQY
Sbjct: 61 TFRQY 65
>gi|308187567|ref|YP_003931698.1| alpha-ketoglutarate-dependent dioxygenase alkB [Pantoea vagans
C9-1]
gi|308058077|gb|ADO10249.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Pantoea vagans
C9-1]
Length = 213
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 88/174 (50%), Gaps = 28/174 (16%)
Query: 286 CLGLDWDPQTRKYGKKRQ--VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C W +R Y ++Q ++G + +P F+ L Q++ SEA
Sbjct: 64 CGDFGWSVDSRGYNYQQQDNLNGRQWPPMPPLFRTLAQQAASEAG--------------- 108
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P +PD C++N Y +L LHQD+DE L++ P+VS S+G A F +G +
Sbjct: 109 FPDFNPDACLLNRYEPGAKLTLHQDKDEK--DLRQ--PIVSVSLGLPAVFQFGGFERGDT 164
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++VLLE GD++++GG SR +HG+ + P P + P R NLTFR+
Sbjct: 165 TQRVLLEHGDIVVWGGPSRLRYHGILPLKPGVHP-------LAGPWRYNLTFRR 211
>gi|389693892|ref|ZP_10181986.1| alkylated DNA repair protein [Microvirga sp. WSM3557]
gi|388587278|gb|EIM27571.1| alkylated DNA repair protein [Microvirga sp. WSM3557]
Length = 206
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 67/109 (61%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++NFY + R+GLHQD+DE ++ PVVS S+GD+A F YG + + +
Sbjct: 103 PDACLINFYEPTARMGLHQDKDEEEFAA----PVVSLSLGDTALFRYGGLERKDPTKSIR 158
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD ++FGG +R ++HG+ + S+ + + + GRLNLT R+
Sbjct: 159 LRSGDAIVFGGPARLIYHGIDRLIEGSS------DLLPQGGRLNLTLRK 201
>gi|150398448|ref|YP_001328915.1| 2OG-Fe(II) oxygenase [Sinorhizobium medicae WSM419]
gi|150029963|gb|ABR62080.1| 2OG-Fe(II) oxygenase [Sinorhizobium medicae WSM419]
Length = 203
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 64/111 (57%), Gaps = 12/111 (10%)
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
+P+ C+VNFY+ R+GLHQDRDE VVS S+GDS F G +
Sbjct: 101 TPEACLVNFYSAEARMGLHQDRDERDLDTA----VVSVSLGDSCLFRVGGRTRGGPTVSL 156
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP-GRLNLTFRQ 457
LESGDV++ GGE R FHGV I PN+ +T+LR GRLNLT R+
Sbjct: 157 KLESGDVVVLGGEGRLAFHGVDRIYPNT-------STLLRSGGRLNLTLRR 200
>gi|365096983|ref|ZP_09331331.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acidovorax sp.
NO-1]
gi|363413604|gb|EHL20798.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acidovorax sp.
NO-1]
Length = 217
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 33/227 (14%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW-- 291
+L PG ++L+ + + L+ + Q + P F G ++ + M C L W
Sbjct: 18 VLEPGAMVLRGFALEKAADLLQAVQQITAQAP--FRHLITPGGLRMSVAMTNCGKLGWVS 75
Query: 292 DPQTRKYGKKRQVDGCEP-SVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPD 350
D +Y DG +P +P F+QL + + A P +PD
Sbjct: 76 DRNGYRY-DPLDPDGGKPWPAMPPLFRQLALEAAATAG---------------FPGFAPD 119
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLE 410
C++N Y RL LHQDRDE Y+ P+VS S+G A FL+G + A A ++ L
Sbjct: 120 ACLINRYAPGTRLSLHQDRDEGNYAH----PIVSVSLGIPAVFLWGGAQRAGNARRIALM 175
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GG +R FHGV + + P + R+NLTFR+
Sbjct: 176 HGDVVVWGGPARLRFHGVLPLPEGTHP-------LTGAHRINLTFRK 215
>gi|433772340|ref|YP_007302807.1| alkylated DNA repair protein [Mesorhizobium australicum WSM2073]
gi|433664355|gb|AGB43431.1| alkylated DNA repair protein [Mesorhizobium australicum WSM2073]
Length = 203
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 101/227 (44%), Gaps = 33/227 (14%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDP 293
+L G+ + YL+ Q +V + + +G F G ++ +RM C L W
Sbjct: 3 VLPKGVRHMPSYLSRAAQEALVEEVRVVVQGAPLFVPAMPRTGKEMSVRMTNCGSLGWVT 62
Query: 294 QTR---KYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPD 350
+Y + G IP QL Q + H P+
Sbjct: 63 DKELGYRYQLTHPLTGEPWPAIPDALMQLWQEVSAYPH-------------------PPE 103
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLE 410
C+VNFY ++GLHQDRDE+ S PVVS S+GD F G + L+
Sbjct: 104 ACLVNFYGQDAKMGLHQDRDEADLSA----PVVSVSLGDDCLFRVGPTTRDGGTKSFRLK 159
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGDV++ GGE R FHGV I P+++ ALL+N GR+NLT R+
Sbjct: 160 SGDVVVLGGEGRLCFHGVDRIYPSTS--ALLKNG----GRINLTLRR 200
>gi|387813610|ref|YP_005429092.1| 2OG-Fe(II) oxygenase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338622|emb|CCG94669.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 216
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--DPQT 295
G+V+L+ + +Q L+ I Q + P F G ++ M C G L W D
Sbjct: 21 GVVVLRRHAVKHQQALMRDIEQVARQAP--FRNMKTPGGHQMSAAMTCCGPLGWVTDETG 78
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y + + G +P F L +S EA P PD C++N
Sbjct: 79 YRYQPQDPLSGLPWPAMPESFVSLACKSAREAG---------------FPGFDPDACLIN 123
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVL 415
Y ++GLHQD+DE ++ P+VS S+G F +G + ++ ++LLE GDV+
Sbjct: 124 RYQPGAKMGLHQDKDEKDFAW----PIVSVSLGLPIVFQFGGLKRSDCPARILLEHGDVV 179
Query: 416 IFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++GG +R +HGV ++ E+ + R NLTFR+
Sbjct: 180 VWGGPARLRYHGVLTLKAG-------EHPVTGSARYNLTFRK 214
>gi|334318080|ref|YP_004550699.1| 2OG-Fe(II) oxygenase [Sinorhizobium meliloti AK83]
gi|384531205|ref|YP_005715293.1| 2OG-Fe(II) oxygenase [Sinorhizobium meliloti BL225C]
gi|384537923|ref|YP_005722008.1| Alkylated DNA repair protein [Sinorhizobium meliloti SM11]
gi|433611842|ref|YP_007188640.1| Alkylated DNA repair protein [Sinorhizobium meliloti GR4]
gi|333813381|gb|AEG06050.1| 2OG-Fe(II) oxygenase [Sinorhizobium meliloti BL225C]
gi|334097074|gb|AEG55085.1| 2OG-Fe(II) oxygenase [Sinorhizobium meliloti AK83]
gi|336034815|gb|AEH80747.1| Alkylated DNA repair protein [Sinorhizobium meliloti SM11]
gi|429550032|gb|AGA05041.1| Alkylated DNA repair protein [Sinorhizobium meliloti GR4]
Length = 203
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 63/111 (56%), Gaps = 12/111 (10%)
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
SP+ C+VNFY+ R+GLHQDRDE VVS S+GD F G +
Sbjct: 101 SPEACLVNFYSAEARMGLHQDRDERDLETA----VVSISLGDDCLFRVGGRTRGGQTVSF 156
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP-GRLNLTFRQ 457
LESGDV++ GGE R FHGV I PN+ +T+LR GRLNLT R+
Sbjct: 157 RLESGDVVVLGGEGRLAFHGVDRIYPNT-------STLLRSGGRLNLTLRR 200
>gi|407722391|ref|YP_006842053.1| alkylated DNA repair protein [Sinorhizobium meliloti Rm41]
gi|418402737|ref|ZP_12976243.1| alkylated DNA repair protein [Sinorhizobium meliloti CCNWSX0020]
gi|359503314|gb|EHK75870.1| alkylated DNA repair protein [Sinorhizobium meliloti CCNWSX0020]
gi|407320623|emb|CCM69227.1| alkylated DNA repair protein [Sinorhizobium meliloti Rm41]
Length = 203
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 63/111 (56%), Gaps = 12/111 (10%)
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
SP+ C+VNFY+ R+GLHQDRDE VVS S+GD F G +
Sbjct: 101 SPEACLVNFYSAEARMGLHQDRDERDLETA----VVSISLGDDCLFRVGGRTRGGQTVSF 156
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP-GRLNLTFRQ 457
LESGDV++ GGE R FHGV I PN+ +T+LR GRLNLT R+
Sbjct: 157 RLESGDVVVLGGEGRLAFHGVDRIYPNT-------STLLRSGGRLNLTLRR 200
>gi|365880048|ref|ZP_09419434.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. ORS 375]
gi|365291930|emb|CCD91965.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. ORS 375]
Length = 217
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 31/225 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG +LL+ + E LI I + + P F + G ++ + M C W D
Sbjct: 19 LAPGAMLLRGFARPDEAELIAAIETIIQRAP--FRRMITPGGHQMSVAMTNCGPFGWVTD 76
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
+Y G +P F++L ++ +EA +PD C
Sbjct: 77 RSGYRYDAVDPESGARWPAMPPLFRELADKAATEAG---------------FAGFAPDAC 121
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y ++ LHQDRDE G P+VS S+G A FL+G + +K ++ L G
Sbjct: 122 LINRYEPGAKMSLHQDRDER----DIGAPIVSVSLGLPATFLFGGLKRTDKTQRHRLVHG 177
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
DV+++GG +R FHGV AP A E+ +L R+NLTFR+
Sbjct: 178 DVVVWGGPARLAFHGV-------APLAEGEHALLGRRRINLTFRR 215
>gi|15963801|ref|NP_384154.1| alkylated DNA repair protein [Sinorhizobium meliloti 1021]
gi|15072976|emb|CAC41435.1| Probable DNA repair system specific for alkylated DNA protein
[Sinorhizobium meliloti 1021]
Length = 206
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 63/111 (56%), Gaps = 12/111 (10%)
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
SP+ C+VNFY+ R+GLHQDRDE VVS S+GD F G +
Sbjct: 104 SPEACLVNFYSAEARMGLHQDRDERDLETA----VVSISLGDDCLFRVGGRTRGGQTVSF 159
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP-GRLNLTFRQ 457
LESGDV++ GGE R FHGV I PN+ +T+LR GRLNLT R+
Sbjct: 160 RLESGDVVVLGGEGRLAFHGVDRIYPNT-------STLLRSGGRLNLTLRR 203
>gi|114704740|ref|ZP_01437648.1| alkylated DNA repair protein [Fulvimarina pelagi HTCC2506]
gi|114539525|gb|EAU42645.1| alkylated DNA repair protein [Fulvimarina pelagi HTCC2506]
Length = 204
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 67/109 (61%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY+ + ++GLHQDRDE ++ PVVS S+GD F G+ + +
Sbjct: 101 PEACLVNFYSETAKMGLHQDRDEEDFTA----PVVSVSLGDDCLFRVGERDRDGRTTSIK 156
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGDV+I GGE R FHGV I P+++ LL+N GR+NLT R+
Sbjct: 157 LRSGDVVILGGEGRLSFHGVDRIYPSTS--TLLKNG----GRINLTLRR 199
>gi|433771782|ref|YP_007302249.1| alkylated DNA repair protein [Mesorhizobium australicum WSM2073]
gi|433663797|gb|AGB42873.1| alkylated DNA repair protein [Mesorhizobium australicum WSM2073]
Length = 209
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P C++NFY ++GLHQDRDE+ +S PVVS S+GD F G +
Sbjct: 102 PQACLINFYTPEAKMGLHQDRDEADFSA----PVVSVSLGDDCLFRVGQTTRDGATKSFR 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+SGDV++ GGE R FHGV I P+++ ALL+N GR+NLT R+
Sbjct: 158 LKSGDVVVLGGEGRLAFHGVDRIYPSTS--ALLKNG----GRINLTLRR 200
>gi|84500641|ref|ZP_00998890.1| alkylated DNA repair protein, putative [Oceanicola batsensis
HTCC2597]
gi|84391594|gb|EAQ03926.1| alkylated DNA repair protein, putative [Oceanicola batsensis
HTCC2597]
Length = 202
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 88/190 (46%), Gaps = 31/190 (16%)
Query: 269 FYQPGYNDGAKLRLRMMCLG-LDWDPQTRKYG-KKRQVDGCEPSVIPSEFKQLVQRSMSE 326
+ P G K+ +RM G W R Y + R DG IP + +S
Sbjct: 39 LFSPTTRFGKKMSVRMTSAGKYGWYSDARGYRYEPRHPDGQSWPPIPPQV-------LSV 91
Query: 327 AHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFS 386
H L ++ +PD C++N+Y R+G+HQDRDE+ ++ PV+S S
Sbjct: 92 WHELTGLER------------APDCCLINYYGEGARMGMHQDRDEADFTF----PVLSLS 135
Query: 387 VGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTML 446
+GD F G+E + E LESGD +I GG +R HGV I NS+ +
Sbjct: 136 LGDDGLFRIGNEERGGRTESFWLESGDAVIMGGAARLTHHGVDRIRFNSS------RLLP 189
Query: 447 RPGRLNLTFR 456
+ GR+NLT R
Sbjct: 190 KGGRINLTCR 199
>gi|345852114|ref|ZP_08805066.1| alkylated DNA repair protein [Streptomyces zinciresistens K42]
gi|345636394|gb|EGX57949.1| alkylated DNA repair protein [Streptomyces zinciresistens K42]
Length = 237
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V L +L Q ++ C++ + P G G + R +CLG W P
Sbjct: 15 PGAVHLPDWLDGPAQRRLLDACRQWARPPAGLRTVRTPGGGTMTARQVCLGRHWYP---- 70
Query: 298 YGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKM----------DSKVSNVEDIL 344
YG DG P L + ++ +A+ S +
Sbjct: 71 YGYAPTAVDGDGSPVKPFPPWLGDLARHAVRDAYGPPGGGAGTPGEPNPQSGAAPAAPAA 130
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANK 403
+ DI ++NFY+ R+G+H+D DE K PVVS S+GD+ F +G+ E
Sbjct: 131 SEPAYDIALINFYDADARMGMHRDSDE-----KALAPVVSLSLGDTCVFRFGNTETRTRP 185
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
V L GD+ +FGG +R FHGV + P + P L + GRLN+T R
Sbjct: 186 YTDVELRGGDLFVFGGPARLAFHGVPRVLPGTGPPELGLS-----GRLNITLR 233
>gi|84684605|ref|ZP_01012506.1| alkylated DNA repair protein, putative [Maritimibacter alkaliphilus
HTCC2654]
gi|84667584|gb|EAQ14053.1| alkylated DNA repair protein, putative [Maritimibacter alkaliphilus
HTCC2654]
Length = 201
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 74/128 (57%), Gaps = 17/128 (13%)
Query: 330 LIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGD 389
++K+ +V+ V A PD C+VNFY R+GLHQDRDE+ +S PV+S S+GD
Sbjct: 87 ILKLWHEVTGV-----AREPDCCLVNFYREKARMGLHQDRDEADFSW----PVLSISLGD 137
Query: 390 SAEF-LYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP 448
F + G ERD K + V L SGDVL+ GGE+R +HG+ I ++ +
Sbjct: 138 DGLFRIGGTERD-GKTQSVWLRSGDVLMLGGEARLAYHGIDRIRFGTS------QLLAEG 190
Query: 449 GRLNLTFR 456
GR+NLT R
Sbjct: 191 GRINLTLR 198
>gi|398833297|ref|ZP_10591433.1| alkylated DNA repair protein [Herbaspirillum sp. YR522]
gi|398221808|gb|EJN08205.1| alkylated DNA repair protein [Herbaspirillum sp. YR522]
Length = 217
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 69/114 (60%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C++N Y R+ LHQD+DE + P+VS S+G A FL+G + +++
Sbjct: 113 FPGFVPDACLINRYQAGARMSLHQDKDEHDMTQ----PIVSVSLGLPATFLFGGAQRSDR 168
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
A+++ LESGDV+++GG +R +FHGV AP A E+ + P R NLT R+
Sbjct: 169 AQRLRLESGDVVVWGGPARLLFHGV-------APLAAGEHALTGPYRYNLTLRR 215
>gi|306845885|ref|ZP_07478453.1| alkylated DNA repair protein AlkB [Brucella inopinata BO1]
gi|306273777|gb|EFM55615.1| alkylated DNA repair protein AlkB [Brucella inopinata BO1]
Length = 212
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 102/230 (44%), Gaps = 32/230 (13%)
Query: 231 TREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGL 289
TRE IL PG VLL+ + E+ ++ + P F G ++ + M C +
Sbjct: 10 TRE-ILAPGAVLLRSFALACEESILSAVAGVCAAAP--FRHMTTPCGYRMSVAMTNCGPV 66
Query: 290 DW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPAL 347
W D +Y G +P F L Q + +A P
Sbjct: 67 GWVTDRTGYRYSPADPETGKPWPPMPDTFLALAQDAARQAG---------------YPDF 111
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
+PD C++N Y RL LHQD+DE +S P+VS S+G A F +G + + K
Sbjct: 112 TPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGIKRTDPITKY 167
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+L GDV+++GG SR +HG+ + E+ L P RLNLTFR+
Sbjct: 168 ILHHGDVVVWGGPSRLFYHGILPLKSG-------EHERLGPFRLNLTFRK 210
>gi|378828130|ref|YP_005190862.1| 2OG-Fe(II) oxygenase [Sinorhizobium fredii HH103]
gi|365181182|emb|CCE98037.1| 2OG-Fe(II) oxygenase domain protein [Sinorhizobium fredii HH103]
Length = 203
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY+ R+GLHQDRDE VVS S+GDS F G +
Sbjct: 102 PEACLVNFYSADARMGLHQDRDERDLETA----VVSISLGDSCLFRVGGRTRGGQTMSFK 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
LESGDV++ GGE R FHGV I PN++ LL+N GR+NLT R+
Sbjct: 158 LESGDVVVLGGEGRLAFHGVDRIYPNTS--TLLKNG----GRVNLTLRR 200
>gi|254476089|ref|ZP_05089475.1| 2OG-Fe(II) oxygenase [Ruegeria sp. R11]
gi|214030332|gb|EEB71167.1| 2OG-Fe(II) oxygenase [Ruegeria sp. R11]
Length = 200
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 33/191 (17%)
Query: 269 FYQPGYNDGAKLRLRMMCLG-LDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMS 325
+ P G K+ +RM G W D +Y + R G IP E
Sbjct: 37 LFSPEVPGGGKMSVRMTSAGAFGWISDQDGYRY-EDRHPSGRTWPEIPQE---------- 85
Query: 326 EAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSF 385
++K+ S V+ +E PD C++N+Y R+GLHQD+DE+ +S PVVS
Sbjct: 86 ----ILKIWSDVTGLER-----EPDCCLINYYGEGARMGLHQDKDEADFSF----PVVSI 132
Query: 386 SVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTM 445
S+GD G++ K + V L SGDV++ GGE+R +HGV I S+ +
Sbjct: 133 SLGDDGLLRIGNQSRGGKTDTVWLNSGDVVLMGGEARLTYHGVDRIRFKSS------RLL 186
Query: 446 LRPGRLNLTFR 456
+ GR+NLT R
Sbjct: 187 PKGGRINLTLR 197
>gi|325272437|ref|ZP_08138825.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
TJI-51]
gi|324102438|gb|EGB99896.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
TJI-51]
Length = 215
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D Q +Y + + G +P L R A A+ D
Sbjct: 65 CGTLGWVSDAQGYRYSRSDPLTGQPWPALPPILLTLANR----AAAMAGFD--------- 111
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
+PD C++N Y RL LHQDRDE + G P+VS S+G A FL+G + A+K
Sbjct: 112 --GFTPDACLINHYLPGTRLSLHQDRDEHDF----GQPIVSLSLGLPAVFLFGGLQRADK 165
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG--RLNLTFRQ 457
+++ L GDVL++GGE R FHGV I P P R G R+NLT R+
Sbjct: 166 TQRIALSHGDVLVWGGEDRLRFHGVLPIKPGVHP---------RMGERRINLTLRK 212
>gi|409402369|ref|ZP_11251935.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acidocella sp.
MX-AZ02]
gi|409129000|gb|EKM98872.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acidocella sp.
MX-AZ02]
Length = 209
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 233 EGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW 291
E + PG+ +L + L+ + + P F + G ++ M C + W
Sbjct: 8 ETLAHPGLTILPGFAGEAAPALMAAVREIAAHAP--FRRMKTPGGKEMSAAMTNCGAVGW 65
Query: 292 --DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP 349
D + +Y G ++P F+ L QR+ +P
Sbjct: 66 VSDAKGYRYQASDPYTGLPWPMMPVIFRDLAQRAAQAGG---------------FAGFAP 110
Query: 350 DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLL 409
D+ ++N Y ++ LHQD DE +S P+VS S+G A FL+G + +KA ++ L
Sbjct: 111 DVALINRYEPGAKMSLHQDVDEQDFSA----PIVSVSLGLPAMFLWGGAKRTDKAARIAL 166
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
SGDVL++GG +R FHG++ + + P + R+NLTFR
Sbjct: 167 ASGDVLVWGGPARRHFHGIAPVKAGTHP-------LTGAARVNLTFR 206
>gi|407939004|ref|YP_006854645.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acidovorax sp.
KKS102]
gi|407896798|gb|AFU46007.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acidovorax sp.
KKS102]
Length = 217
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW-- 291
+L PG V+L+ + + L+ + Q + P F G + + M C L W
Sbjct: 18 VLEPGAVVLRGFALAQATDLLTAVQQITAQAP--FRHLVTPGGLTMSVAMTNCGALGWVS 75
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
D +Y G +P F+QL + + A +PD
Sbjct: 76 DRSGYRYDPIDPQTGQSWPTMPLLFRQLAREAAETAG---------------FAGFAPDA 120
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y RL LHQDRDE Y+ P+VS S+G A FL+G + A+K ++ L
Sbjct: 121 CLINRYAPGARLSLHQDRDEGNYAH----PIVSVSLGVPAMFLWGGAQRADKTRRIALLH 176
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GG +R FHGV + P + R+NLTFR+
Sbjct: 177 GDVVVWGGPARLRFHGVLPLPEAHHP-------LTGAHRINLTFRK 215
>gi|148254384|ref|YP_001238969.1| DNA-N1-methyladenine dioxygenase [Bradyrhizobium sp. BTAi1]
gi|146406557|gb|ABQ35063.1| DNA-N1-methyladenine dioxygenase [Bradyrhizobium sp. BTAi1]
Length = 217
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 104/225 (46%), Gaps = 31/225 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG VLL+ + ++ LI I + P F + G ++ + M C W D
Sbjct: 19 LAPGAVLLRGFARSQQAELIAVIEAIAAQAP--FRRMMTPGGHQMSVAMTSCGSCGWVTD 76
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
+Y G IP F+ L +++ SEA +PD C
Sbjct: 77 RTGYRYDALDPESGQPWPAIPPLFRDLAEQAASEAG---------------FADFAPDAC 121
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y ++ LHQDRDE G P+VS S+G A FL+G + +K ++ L G
Sbjct: 122 LINRYEPGAKMSLHQDRDER----DIGAPIVSVSLGLPATFLFGGLKRTDKTQRYRLVHG 177
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
DV+++GG +R FHG+ AP A E+ +L R+NLTFR+
Sbjct: 178 DVVVWGGPARLAFHGI-------APLADGEHALLGRRRINLTFRR 215
>gi|390435232|ref|ZP_10223770.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pantoea agglomerans
IG1]
Length = 213
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 28/174 (16%)
Query: 286 CLGLDWDPQTRKYGKKRQ--VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C W +R Y ++Q ++G + +P F+ L Q++ SEA
Sbjct: 64 CGDFGWSVDSRGYQYQQQDNMNGRKWPAMPPLFRTLAQQAASEAG--------------- 108
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P +PD C++N Y +L LHQD+DE L++ P+VS S+G A F +G +
Sbjct: 109 FPGFNPDACLLNRYEPGAKLTLHQDKDEK--DLRQ--PIVSVSLGLPAVFQFGGFERGDS 164
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++VLLE GD++++GG SR +HG+ + P P ++ R NLTFR+
Sbjct: 165 TQRVLLEHGDIVVWGGPSRLRYHGILPLKPGVHP-------LVGAWRYNLTFRR 211
>gi|337264923|ref|YP_004608978.1| 2OG-Fe(II) oxygenase [Mesorhizobium opportunistum WSM2075]
gi|336025233|gb|AEH84884.1| 2OG-Fe(II) oxygenase [Mesorhizobium opportunistum WSM2075]
Length = 209
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C++NFY ++GLHQDRDE +S PVVS S+GD F G +
Sbjct: 102 PEACLINFYTAEAKMGLHQDRDEVDFSA----PVVSVSLGDDCLFRVGQTTRDGGTKSFR 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+SGDV++ GGE R FHGV I P+++ ALL+N GR+NLT R+
Sbjct: 158 LKSGDVVVLGGEGRLAFHGVDRIYPSTS--ALLKNG----GRINLTLRR 200
>gi|227506087|ref|ZP_03936136.1| alkylated DNA repair protein [Corynebacterium striatum ATCC 6940]
gi|227197369|gb|EEI77417.1| alkylated DNA repair protein [Corynebacterium striatum ATCC 6940]
Length = 227
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 111/228 (48%), Gaps = 25/228 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGK----GPGGFYQPGYNDGAKLRLRMMCLGLDW 291
+ PG+ + ++ + +Q +V +E+ + P YQP G K+ + + LG W
Sbjct: 12 IAPGVAHVPGWVDVAKQRALVEETREVARRYAGTPMAMYQPQLKSG-KMSVHQLHLGRYW 70
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVS-NVEDILPALSPD 350
+T +Y V E + +P L + A ++ ++VS +E + P+
Sbjct: 71 HYETYRY-----VGNIEGTRVPPMLVSLQEI----ARPALRAAAEVSPELEPWVETFYPE 121
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLL 409
+ +VN+Y +G+H D E + PV+S S+GD A F G+ + NK + V L
Sbjct: 122 MALVNYYPPGSGMGMHVDDFEESLA-----PVISLSIGDEALFRMGNTENRNKPWDDVTL 176
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGD+++FGG R +HGV +N + P E L+ GR+N+T RQ
Sbjct: 177 SSGDLIVFGGPKRLAYHGVVRVNDATLP----EGCGLKEGRINITIRQ 220
>gi|85705710|ref|ZP_01036807.1| alkylated DNA repair protein, putative [Roseovarius sp. 217]
gi|85669700|gb|EAQ24564.1| alkylated DNA repair protein, putative [Roseovarius sp. 217]
Length = 202
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 12/109 (11%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++NFY R+G+HQDRDE+ ++ PV+S S+GD A F G K E +
Sbjct: 102 PDCCLINFYAPGARMGMHQDRDEADFNW----PVLSVSLGDDALFRIGTLARGGKTESLW 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLR-PGRLNLTFR 456
L SGDV++ GG +R +HGV I P S +++LR GR+NLT R
Sbjct: 158 LNSGDVVVMGGAARLAYHGVDRIRPGS-------SSLLRGGGRINLTCR 199
>gi|444309397|ref|ZP_21145035.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Ochrobactrum
intermedium M86]
gi|443487264|gb|ELT50028.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Ochrobactrum
intermedium M86]
Length = 212
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 31/226 (13%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW-- 291
+L PG VLL+ + RE ++ + P F G ++ + M C W
Sbjct: 13 VLAPGAVLLRGFALSREDAVLKAVADVSAAAP--FRHMTTPGGYRMSVAMTNCGNFGWVT 70
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
D +Y G +P F+ L + + EA P PD
Sbjct: 71 DRSGYRYSTDDPETGLPWPAMPEAFRTLARTAAGEAG---------------YPDFVPDA 115
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE ++ P+VS S+G A F +G + + K +L
Sbjct: 116 CLINRYEPGAKLSLHQDKDEQDFNQ----PIVSVSLGLPATFRFGGLKRTDPIAKYILHH 171
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GG SR +HG+ ++ E+ L P R NLTFR+
Sbjct: 172 GDVVVWGGPSRLFYHGILALKRG-------EHEKLGPFRFNLTFRK 210
>gi|385788858|ref|YP_005819967.1| DNA repair system specific for alkylated DNA [Erwinia sp. Ejp617]
gi|310768130|gb|ADP13080.1| DNA repair system specific for alkylated DNA [Erwinia sp. Ejp617]
Length = 213
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 106/234 (45%), Gaps = 35/234 (14%)
Query: 229 DWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CL 287
D R+ L G V+L+ LI +I P FY G ++ + M C
Sbjct: 8 DQPRQEPLAEGAVILRRRARDITPRLIAQIEDIAASNP--FYHRITPGGHRMSVAMTHCG 65
Query: 288 GLDWDPQTR--KYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILP 345
L W +R +Y + + G +P +F+QL Q EA
Sbjct: 66 DLGWSTDSRGYQYSAQDEASGQRWPAMPPQFRQLAQECAGEAG---------------FS 110
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+PD C++N Y ++ LHQD+DE L++ P+VS S+G A FL+G + ++
Sbjct: 111 GFNPDACLINRYEPGAKMTLHQDKDER--DLRQ--PIVSVSLGLPAVFLFGGFERGDASQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFRQ 457
+VLLE GDV+++GG SR +HG+ + P GA R NLTFR+
Sbjct: 167 RVLLEHGDVVVWGGPSRLRYHGILPLKAGIHPLAGAF---------RFNLTFRR 211
>gi|254510523|ref|ZP_05122590.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodobacteraceae
bacterium KLH11]
gi|221534234|gb|EEE37222.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodobacteraceae
bacterium KLH11]
Length = 200
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 34/225 (15%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW-- 291
+L G + K YL + Q ++ + + + K Y+P G ++ +RM G L W
Sbjct: 4 LLLRGFDIRKGYLDVAAQTSLIELLRPILKA-APLYRPVTPSGKEMSVRMTSAGALGWVT 62
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
D +Y + + G IP + + + ++ A PD
Sbjct: 63 DRAGYRY-QDKHPKGLNWPAIPDDILA-IWKDLTRAER------------------QPDC 102
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N+Y ++GLHQD+DE+ +S PV+S S+GD A F G+ K E + L S
Sbjct: 103 CLINYYGEGTKMGLHQDKDEADFSW----PVLSISLGDDALFRIGNTTRGGKTESIWLSS 158
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GDV+I GG +R +HGV I S+ + + GR+NLT R
Sbjct: 159 GDVVIMGGPARLAYHGVDRIRFGSS------RLLPKGGRINLTLR 197
>gi|239817611|ref|YP_002946521.1| 2OG-Fe(II) oxygenase [Variovorax paradoxus S110]
gi|239804188|gb|ACS21255.1| 2OG-Fe(II) oxygenase [Variovorax paradoxus S110]
Length = 220
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 85/174 (48%), Gaps = 28/174 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D + +YG+ G +P+ F +L Q S +EA
Sbjct: 71 CGRLGWISDRRGYRYGEHDPETGLPWPAMPAAFARLAQASAAEAG--------------- 115
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
PD C+VN Y RL LHQD+DE Y G P+VS S+G A FL+G ++K
Sbjct: 116 FAGFEPDACLVNRYEPGTRLSLHQDKDERDY----GAPIVSVSLGMPATFLFGGLARSDK 171
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
A ++ L GDV+++GG R +HGV + P ALL + R+NLTFR+
Sbjct: 172 AARIPLVHGDVVVWGGPDRLRYHGVLPL--EDRPHALLGSR-----RINLTFRK 218
>gi|261340627|ref|ZP_05968485.1| alkylated DNA repair protein AlkB [Enterobacter cancerogenus ATCC
35316]
gi|288317040|gb|EFC55978.1| alkylated DNA repair protein AlkB [Enterobacter cancerogenus ATCC
35316]
Length = 216
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 100/225 (44%), Gaps = 31/225 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG V+L+ + R + L+ I P F G + + M C L W
Sbjct: 15 LAPGAVILRRFALTRAKALLDGINDVAAISP--FRHMVTPGGYTMSVAMTNCGPLGWATN 72
Query: 295 TRKY--GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
R Y K V G +P+ F+ L + EA P PD C
Sbjct: 73 ARGYLYAPKDPVTGHPWPPVPAVFEALCHEAAIEAG---------------YPEFQPDAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y +L LHQD+DE L+ P+VS S+G A F +G + ++ ++++LE G
Sbjct: 118 LINRYAVGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAVFQFGGLKRSDPLKRLMLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
DV+++G ESR +HG+ + P P M R NLTFRQ
Sbjct: 174 DVVVWGRESRLYYHGIQPLKPGVHP-------MTGEYRYNLTFRQ 211
>gi|403057256|ref|YP_006645473.1| alkylated DNA repair protein [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402804582|gb|AFR02220.1| alkylated DNA repair protein [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 218
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 26/174 (14%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D + +Y + G +P F QL +++ SEA
Sbjct: 67 CGSLGWVTDERGYRYTAHDPLSGEAWPAMPEVFSQLAKQAASEAG--------------- 111
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
PD C++N Y+ R+ LHQD++E + P+VS S+G SA FL+G ++K
Sbjct: 112 FADFEPDACLINRYDVGTRMSLHQDKNERDFHQ----PIVSVSLGLSATFLFGGMARSDK 167
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
A +V L GDV+++GGESR FHG+ + P + + R NLTFR+
Sbjct: 168 ALRVALTHGDVVVWGGESRLYFHGILPLKSGRMPEGMPDEC-----RFNLTFRK 216
>gi|308808165|ref|XP_003081393.1| oxidoreductase, 2OG-Fe (ISS) [Ostreococcus tauri]
gi|116059855|emb|CAL55562.1| oxidoreductase, 2OG-Fe (ISS) [Ostreococcus tauri]
Length = 214
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 70/118 (59%), Gaps = 3/118 (2%)
Query: 340 VEDILPALSPDICIVNFYNTSGRLGLHQDRDESR-YSLKKGLPVVSFSVGDSAEFLYGDE 398
V+D +P ++P C+VNFY H+D ++ + + G P+VSFSVG SA+F Y
Sbjct: 71 VDDAMPDMNPTTCLVNFYKDGAEFKWHKDSEDPKLVKSRAGPPIVSFSVGMSADFGYKYS 130
Query: 399 RDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ E V L SGDVL+FGG SR + H V +++P S PG L ML GRLN+T R
Sbjct: 131 FEDPTHEVVRLNSGDVLLFGGPSRMIVHSVLNVHPGSMPGH-LRGKMLN-GRLNVTVR 186
>gi|392399663|ref|YP_006436263.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis Cp162]
gi|390530741|gb|AFM06470.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis Cp162]
Length = 193
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 92/178 (51%), Gaps = 24/178 (13%)
Query: 284 MMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
+M LG W+ + +Y + Q G + IP+ F + +A + +DS D+
Sbjct: 33 LMSLGKHWEYNSHQYVSEWQ--GQKVPDIPNNFLTQAYEAFEQA---VCLDS------DL 81
Query: 344 LPALSP---DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
P S D +VN+Y +G+HQD E + PVVS S+G +A F G+ +
Sbjct: 82 APWASDYRIDAALVNYYPPGSGMGMHQDVFE-----ESSAPVVSLSIGATAVFRAGNSEN 136
Query: 401 ANKA-EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
NK + VLL SGD L+FGG SR +FHG+ I+ + P +N L GR+N+TFRQ
Sbjct: 137 RNKPWQDVLLLSGDALVFGGPSRKIFHGIKRIDDATVP----DNCGLERGRINITFRQ 190
>gi|220920495|ref|YP_002495796.1| 2OG-Fe(II) oxygenase [Methylobacterium nodulans ORS 2060]
gi|219945101|gb|ACL55493.1| 2OG-Fe(II) oxygenase [Methylobacterium nodulans ORS 2060]
Length = 215
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
P+ C+VN Y R+GLHQDRDE+ ++ PV+S S+G +A F YG R + +
Sbjct: 100 PPEACLVNLYAPGSRMGLHQDRDEAEFAA----PVLSLSLGATAIFRYGGLRRGDPTRSI 155
Query: 408 LLESGDVLIFGGESRHVFHGVSSI---NPNSAPGALLENTMLRPGRLNLTFRQ 457
L GD L+ GG SR +FHG+ I P+ LL + GRLNLT R+
Sbjct: 156 RLRGGDALVIGGASRLIFHGIDRIVAEPPDLLAAPLLPQAVPPGGRLNLTLRR 208
>gi|254460095|ref|ZP_05073511.1| alkylated DNA repair protein [Rhodobacterales bacterium HTCC2083]
gi|206676684|gb|EDZ41171.1| alkylated DNA repair protein [Rhodobacteraceae bacterium HTCC2083]
Length = 176
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 89/190 (46%), Gaps = 31/190 (16%)
Query: 269 FYQPGYNDGAKLRLRMMCLG-LDWDPQTRKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSE 326
+ P G +R+RM G W Y R DG IP+
Sbjct: 13 LFSPMTPYGKPMRVRMTSAGDFGWVSDRSGYRYSRAHPDGMAWPAIPAP----------- 61
Query: 327 AHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFS 386
+IK+ + VS + +P+ C++NFY ++G+HQDRDE +S PVVS S
Sbjct: 62 ---VIKIWNDVSGSDR-----TPECCLMNFYGEDAKMGMHQDRDEGDFSY----PVVSVS 109
Query: 387 VGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTML 446
+GD A F G+ K E + L SGDV++ GG++R +HGV I S+ +
Sbjct: 110 LGDDALFRIGNLERGGKTESIWLTSGDVVVMGGDARLTYHGVDKIRFGSS------RVLA 163
Query: 447 RPGRLNLTFR 456
+ GRLNLT R
Sbjct: 164 KGGRLNLTLR 173
>gi|354599032|ref|ZP_09017049.1| 2OG-Fe(II) oxygenase [Brenneria sp. EniD312]
gi|353676967|gb|EHD23000.1| 2OG-Fe(II) oxygenase [Brenneria sp. EniD312]
Length = 219
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 112/248 (45%), Gaps = 38/248 (15%)
Query: 215 NFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGY 274
N + + E R+ WT L PG V+L+ ++ + L+ + + P F
Sbjct: 2 NLDLFAQEEPRR---WTES--LAPGAVILRGFVQQQAADLMAAVNAVAARAP--FRHMTT 54
Query: 275 NDGAKLRLRMM-CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALI 331
G + + M C L W D +Y + G +P F QL +++ +EA +
Sbjct: 55 PGGYTMSVAMSNCGPLGWVTDETGYRYSPVDPLGGKPWPAMPEIFSQLAKKAAAEAGFV- 113
Query: 332 KMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSA 391
PD C++N Y RL LHQD+DE + P+VSFS+G SA
Sbjct: 114 --------------DFEPDACLINRYEVGARLSLHQDKDEH----DRRQPIVSFSLGLSA 155
Query: 392 EFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG-- 449
FL+G ++ ++ L GDV+++GG SR +HG+S + S P L PG
Sbjct: 156 VFLFGGMARNDRVRRLPLTHGDVVVWGGASRLRYHGISPLKGGSVPSYL-------PGEY 208
Query: 450 RLNLTFRQ 457
R NLTFR+
Sbjct: 209 RFNLTFRK 216
>gi|221069587|ref|ZP_03545692.1| 2OG-Fe(II) oxygenase [Comamonas testosteroni KF-1]
gi|220714610|gb|EED69978.1| 2OG-Fe(II) oxygenase [Comamonas testosteroni KF-1]
Length = 224
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 11/112 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P +PD C++N Y R+GLH+D+DE ++ P+VS S+G + FL+G +
Sbjct: 111 PGFAPDACLINCYQPGARMGLHRDQDEHDFAA----PIVSVSLGLACSFLWGGLTRQSPT 166
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
++ L GDVL++GG SR VFHGV+ + P P LL N R NLTFR
Sbjct: 167 RRLALTHGDVLVWGGPSRLVFHGVAPLKPGQHP--LLGNE-----RWNLTFR 211
>gi|384509973|ref|YP_005689551.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis PAT10]
gi|341823912|gb|AEK91433.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis PAT10]
Length = 160
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 91/177 (51%), Gaps = 24/177 (13%)
Query: 285 MCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDIL 344
M LG W+ + +Y + Q G E IP+ F + +A + +DS D+
Sbjct: 1 MSLGKHWEYSSHQYVSEWQ--GQEVPDIPNNFLTQAYEAFEQA---VCLDS------DLA 49
Query: 345 PALSP---DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDA 401
P S D +VN+Y +G+HQD E + PVVS S+G +A F G+ +
Sbjct: 50 PWASDYRIDAALVNYYPPGSGMGMHQDVFE-----ESSAPVVSLSIGATAVFRAGNSENR 104
Query: 402 NKA-EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
NK + VLL SGD L+FGG SR +FHG+ I+ + P +N L GR+N+TFRQ
Sbjct: 105 NKPWQDVLLLSGDALVFGGPSRKIFHGIKRIDDATVP----DNCGLERGRINITFRQ 157
>gi|227823907|ref|YP_002827880.1| 2OG-Fe(II) oxygenase [Sinorhizobium fredii NGR234]
gi|227342909|gb|ACP27127.1| 2OG-Fe(II) oxygenase domain protein [Sinorhizobium fredii NGR234]
Length = 203
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY+ R+GLHQDRDE VVS S+GD+ F G +
Sbjct: 102 PEACLVNFYSAEARMGLHQDRDERDLETA----VVSISLGDTCLFRVGGRTRGGQTMSFK 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
LESGDV++ GGE R FHGV I PN++ LL+N GR+NLT R+
Sbjct: 158 LESGDVVVLGGEGRLAFHGVDRIYPNTS--TLLKNG----GRVNLTLRR 200
>gi|227549556|ref|ZP_03979605.1| DNA-N1-methyladenine dioxygenase [Corynebacterium lipophiloflavum
DSM 44291]
gi|227078320|gb|EEI16283.1| DNA-N1-methyladenine dioxygenase [Corynebacterium lipophiloflavum
DSM 44291]
Length = 215
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 104/226 (46%), Gaps = 32/226 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKG----PGGFYQPGYNDGAKLRLRMMCLGLDW 291
L PG+V L ++L + +Q +V +E+ + P +P G +++ ++ LG W
Sbjct: 15 LMPGVVHLPNFLELEQQAELVVQTREIARSVAGTPVAMRRPMVGKG-QMKAHLLSLGWFW 73
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
T Y RQVDG +P F+ + + ++ A + + + VE
Sbjct: 74 --ATNPYRLVRQVDGYAVPPVPDNFQDIADQVLAAAREVDEAVGETIRVE---------T 122
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
+VNFY +G H D +E + PVVS S+GD F + +VLL S
Sbjct: 123 ALVNFYPPGAGMGEHVDAEEEAEN-----PVVSLSIGDDTLFRI-------EGHEVLLMS 170
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GD L+FGG +R HGV+ + P T L+ GR+N+T RQ
Sbjct: 171 GDALVFGGPARRARHGVAGARAGTGP----NETGLKEGRINITMRQ 212
>gi|395762214|ref|ZP_10442883.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Janthinobacterium
lividum PAMC 25724]
Length = 220
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 11/113 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P +PD C+VN Y R+ LHQDRDE ++ P+VS S+G A FL+G A+KA
Sbjct: 117 PGFTPDACLVNRYVPGARMALHQDRDECDFTA----PIVSVSLGLPAIFLFGGAARADKA 172
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++ L GDV+++GG R FHGV+ + E+ +L R+NLTFR+
Sbjct: 173 ARIALLHGDVVVWGGADRLRFHGVAPLKEG-------EHALLGAQRINLTFRK 218
>gi|386011948|ref|YP_005930225.1| 2OG-Fe(II) oxygenase [Pseudomonas putida BIRD-1]
gi|313498654|gb|ADR60020.1| 2OG-Fe(II) oxygenase [Pseudomonas putida BIRD-1]
Length = 225
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y RL LHQDRDE + G P+VS S+G A FL+G + A+KA+++
Sbjct: 125 PDACLVNHYLPGTRLSLHQDRDEQDF----GQPIVSVSLGLPAVFLFGGLQRADKAQRIA 180
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDVL++GGE R FHGV I P P L R+NLT R+
Sbjct: 181 LSHGDVLVWGGEDRLRFHGVLPIKPGVHP-------RLGERRINLTLRK 222
>gi|397697924|ref|YP_006535807.1| 2OG-Fe [Pseudomonas putida DOT-T1E]
gi|397334654|gb|AFO51013.1| 2OG-Fe [Pseudomonas putida DOT-T1E]
Length = 225
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y RL LHQDRDE + G P+VS S+G A FL+G + A+KA+++
Sbjct: 125 PDACLVNHYLPGTRLSLHQDRDEQDF----GQPIVSVSLGLPAVFLFGGLQRADKAQRIA 180
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDVL++GGE R FHGV I P P L R+NLT R+
Sbjct: 181 LSHGDVLVWGGEDRLRFHGVLPIKPGVHP-------RLGERRINLTLRK 222
>gi|83951116|ref|ZP_00959849.1| alkylated DNA repair protein, putative [Roseovarius nubinhibens
ISM]
gi|83839015|gb|EAP78311.1| alkylated DNA repair protein, putative [Roseovarius nubinhibens
ISM]
Length = 204
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 64/108 (59%), Gaps = 10/108 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y R+GLHQDRDE+ +S PV+S S+GD A F G + ++ V
Sbjct: 104 PDCCLINHYTDKARMGLHQDRDEADFSW----PVLSVSLGDEALFRMGGQERSDPTRSVW 159
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L SGDV++ GG +R +HGV I P ++ LL+ GR+NLT R
Sbjct: 160 LRSGDVVVMGGAARLAYHGVDRIKPGTS--TLLQGG----GRINLTLR 201
>gi|254463758|ref|ZP_05077169.1| 2OG-Fe(II) oxygenase [Rhodobacterales bacterium Y4I]
gi|206684666|gb|EDZ45148.1| 2OG-Fe(II) oxygenase [Rhodobacterales bacterium Y4I]
Length = 200
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 10/108 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C++N+Y R+GLHQD+DE+ +S PVVS S+GD F G+ K E V
Sbjct: 100 PECCLLNYYGEGARMGLHQDKDEADFSF----PVVSISLGDEGLFRIGNRTRGGKTESVW 155
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L SGDV++ GGE+R ++HGV I S+ + + GR+NLT R
Sbjct: 156 LSSGDVVVMGGEARLMYHGVDRIRFKSS------RLLPKGGRINLTLR 197
>gi|148547584|ref|YP_001267686.1| 2OG-Fe(II) oxygenase [Pseudomonas putida F1]
gi|148511642|gb|ABQ78502.1| DNA-N1-methyladenine dioxygenase [Pseudomonas putida F1]
Length = 225
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y RL LHQDRDE + G P+VS S+G A FL+G + A+KA+++
Sbjct: 125 PDACLVNHYLPGTRLSLHQDRDEQDF----GQPIVSVSLGLPAVFLFGGLQRADKAQRIA 180
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDVL++GGE R FHGV I P P L R+NLT R+
Sbjct: 181 LSHGDVLVWGGEDRLRFHGVLPIKPGVHP-------RLGERRINLTLRK 222
>gi|110677776|ref|YP_680783.1| alkylated DNA repair protein [Roseobacter denitrificans OCh 114]
gi|109453892|gb|ABG30097.1| alkylated DNA repair protein [Roseobacter denitrificans OCh 114]
Length = 199
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 66/111 (59%), Gaps = 10/111 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
A P+ C+VNFY R+GLHQD+DE SL+ PV+S S+GD F G +K +
Sbjct: 96 ARDPECCLVNFYGEGARMGLHQDKDEG--SLE--WPVLSISLGDDGLFRMGHSERGSKTQ 151
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
V L+SGDV++ GG +R +HGV I S+ LLEN GRLNLT R
Sbjct: 152 SVWLQSGDVVVMGGAARLAYHGVDRIRFGSS--TLLENG----GRLNLTLR 196
>gi|290962586|ref|YP_003493768.1| DNA repair protein [Streptomyces scabiei 87.22]
gi|260652112|emb|CBG75244.1| putative DNA repair protein [Streptomyces scabiei 87.22]
Length = 242
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 102/243 (41%), Gaps = 46/243 (18%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDW------ 291
PG V + L +Q ++ C+ + P G G + R +CLG W
Sbjct: 15 PGAVHVPDRLDAGQQRRLLDACRAWARPPAGLRTVRTPGGGTMTARQVCLGRHWGVVPAC 74
Query: 292 ---------DP-----QTRKYGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMD 334
+P T Y R V DG P+ +L +R++++ +
Sbjct: 75 PACGRAVRDNPACPGRHTYPYAYSRTVVDGDGAPVKPFPAWLGELGRRAVADTLGPQRAT 134
Query: 335 SKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFL 394
DI ++N+Y+ R+G+H+D DE PVVS S+GD+ F
Sbjct: 135 DPY------------DIALINYYDADARMGMHRDSDE-----PSDAPVVSLSLGDTCLFR 177
Query: 395 YGDERDANKA-EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNL 453
+G+ R + V L SGD+ +FGGE+R +HGV + +AP L GRLN+
Sbjct: 178 FGNPRTRTRPYTDVELRSGDLFVFGGEARRAYHGVPRVYAGTAPPGLGLT-----GRLNI 232
Query: 454 TFR 456
T R
Sbjct: 233 TLR 235
>gi|34498651|ref|NP_902866.1| alkylated DNA repair protein, AlkB protein [Chromobacterium
violaceum ATCC 12472]
gi|34104504|gb|AAQ60862.1| alkylated DNA repair protein, AlkB protein [Chromobacterium
violaceum ATCC 12472]
Length = 215
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 64/109 (58%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y R+GLHQD+DE +S P+VS S+G A FL G A+K ++L
Sbjct: 116 PDACLINCYLPGARMGLHQDKDERDFSA----PIVSVSLGLPAIFLLGGLSRADKTARIL 171
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+ GDVL++GG R FHGV + P P +L RLNLTFR+
Sbjct: 172 LQHGDVLVWGGPDRLRFHGVLPVQPGIHP-------LLGGRRLNLTFRK 213
>gi|367476641|ref|ZP_09476017.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. ORS 285]
gi|365271054|emb|CCD88485.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. ORS 285]
Length = 217
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 31/226 (13%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW-- 291
+L PG VLL+ + ++ L+ I + P F + G ++ + M C + W
Sbjct: 18 VLAPGAVLLRGFARPQQAELLAAIDAITAQAP--FRRMVTPGGHQMSVAMTNCGPVGWVT 75
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
D +Y G +P F++L + + EA +PD
Sbjct: 76 DRGGYRYDPIDPQSGQPWPAMPVLFRELAETAAREAG---------------FAGFAPDA 120
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y ++ LHQDRDE G P+VS S+G A FL+G + +K ++ L
Sbjct: 121 CLINRYEPGAKMSLHQDRDER----DVGAPIVSVSLGLPATFLFGGFKRTDKTQRYRLVH 176
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GG +R FHGV+++ E+ +L R+NLTFR+
Sbjct: 177 GDVVVWGGPARLAFHGVAALADG-------EHALLGRQRINLTFRR 215
>gi|421520931|ref|ZP_15967593.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas putida
LS46]
gi|402755541|gb|EJX16013.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas putida
LS46]
Length = 215
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y RL LHQDRDE + G P+VS S+G A FL+G + A+KA+++
Sbjct: 115 PDACLVNHYLPGTRLSLHQDRDEQDF----GQPIVSVSLGLPAVFLFGGLQRADKAQRIA 170
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDVL++GGE R FHGV I P P L R+NLT R+
Sbjct: 171 LSHGDVLVWGGEDRLRFHGVLPIKPGVHP-------RLGERRINLTLRK 212
>gi|148558033|ref|YP_001257498.1| alkylated DNA repair protein AlkB [Brucella ovis ATCC 25840]
gi|148369318|gb|ABQ62190.1| alkylated DNA repair protein AlkB [Brucella ovis ATCC 25840]
Length = 199
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 102/232 (43%), Gaps = 45/232 (19%)
Query: 236 LRPGMVLLKHY-LTIREQIL--IVRICQELG----KGPGGFYQPGYNDGAKLRLRMM-CL 287
+ PG VLL+ + L E IL + R+C PGG+ ++ + M C
Sbjct: 1 MAPGAVLLRGFALACEESILSAVARVCAAAPFRHMTTPGGY---------RMSVAMTNCG 51
Query: 288 GLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILP 345
+ W D +Y G +P F L Q + +A P
Sbjct: 52 PVGWVTDRTGYRYSPADPETGKPWPSMPDTFLALAQDAARQAG---------------YP 96
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+PD C++N Y RL LHQD+DE +S P+VS S+G A F +G + +
Sbjct: 97 DFTPDACLINRYEPGARLSLHQDKDERNFSN----PIVSVSLGLPATFQFGGMKRTDPIT 152
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
K +L GDV+++GG SR +HG+ + E+ L P RLNLTFR+
Sbjct: 153 KYILHHGDVVVWGGPSRLFYHGILPLKSG-------EHERLGPFRLNLTFRK 197
>gi|297539834|ref|YP_003675603.1| 2OG-Fe(II) oxygenase [Methylotenera versatilis 301]
gi|297259181|gb|ADI31026.1| 2OG-Fe(II) oxygenase [Methylotenera versatilis 301]
Length = 212
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 33/220 (15%)
Query: 242 LLKHYLTIREQILIVRICQELGKGP--GGFYQPGYNDGAKLRLRMMCLGLDW--DPQTRK 297
LLK Y E+ L++ + Q + + P + G+ A + C L W D Q +
Sbjct: 20 LLKRYALANEKPLLMDLAQVISQAPLRHMMTKMGFAMSAAMT---NCGELGWVSDRQGYR 76
Query: 298 YGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFY 357
Y K ++P F+QL + +EA +D +P D C++N Y
Sbjct: 77 YDMKDPATNAAWPLMPVSFQQLATFAAAEA-----------GFDDFVP----DACLINQY 121
Query: 358 NTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIF 417
+GLHQD++E ++ P+VS S+G A F +G +K K+ L GDV+++
Sbjct: 122 QVGASMGLHQDKNELDFNQ----PIVSVSLGVPAVFQFGGLTRTDKTLKIPLVHGDVVVW 177
Query: 418 GGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GG+SR FHG++ + N+ P +L R NLTFR+
Sbjct: 178 GGQSRLNFHGIAPLKMNTHP-------ILGAYRYNLTFRK 210
>gi|73538928|ref|YP_299295.1| DNA-N1-methyladenine dioxygenase [Ralstonia eutropha JMP134]
gi|72122265|gb|AAZ64451.1| DNA-N1-methyladenine dioxygenase [Ralstonia eutropha JMP134]
Length = 223
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 104/223 (46%), Gaps = 33/223 (14%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPG-GFYQPGYNDGAKLRLRMM-CLGLDW--DPQ 294
G ++L+ + + L+ I K P PG G ++ + M C W D
Sbjct: 28 GAIVLRGFARTQAPQLLDEIGDIAAKAPWRHMITPG---GLRMSVAMTNCGQAGWVSDRT 84
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y +DG +P+ F L R+ +EA +PD C++
Sbjct: 85 GYRYDPCDPLDGEPWPAMPAAFLDLATRAAAEAG---------------FACFAPDACLI 129
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
N Y RL LHQDRDE L+ P+VS S+G A FL+G R A++ ++ L GDV
Sbjct: 130 NRYEPGTRLSLHQDRDER--DLRA--PIVSVSLGLPAVFLFGGLRRADRPARIRLAHGDV 185
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++GG SR FHGV AP A ++ +L R+NLTFR+
Sbjct: 186 VVWGGPSRLAFHGV-------APLADGDHPLLGQKRINLTFRR 221
>gi|395497493|ref|ZP_10429072.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
PAMC 25886]
Length = 226
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 83/173 (47%), Gaps = 28/173 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W DP +Y G +P +QL + D+ ++ E
Sbjct: 77 CGELGWTTDPTGYRYSPVDPNSGQPWPALPEALRQLA--------ITVAADAGFADFE-- 126
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
PD C++N Y ++ LHQD++E Y+ PVVS S+G A FL+G ++K
Sbjct: 127 -----PDACLINRYVPGAKMSLHQDKNERNYAA----PVVSVSLGLPAIFLFGGHERSDK 177
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+KV L GDV+++GG R FHGV I P + P ++ P R+NLTFR
Sbjct: 178 PQKVSLFHGDVVVWGGVDRLRFHGVMPIKPGTHP-------VMGPQRINLTFR 223
>gi|384919278|ref|ZP_10019334.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citreicella sp.
357]
gi|384466889|gb|EIE51378.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citreicella sp.
357]
Length = 204
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 92/190 (48%), Gaps = 31/190 (16%)
Query: 269 FYQPGYNDGAKLRLRMMCLG-LDWDPQTRKYG-KKRQVDGCEPSVIPSEFKQLVQRSMSE 326
YQP G + +RM G W R Y + R G + IP
Sbjct: 41 LYQPVTPRGQPMSVRMSSAGRFGWVTDRRGYRYEPRHPGGMDWPPIPD------------ 88
Query: 327 AHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFS 386
+++++ V++ A +P+ C++N+Y T R+GLHQD+DE+ ++ PVVS S
Sbjct: 89 --SVLRIWDAVADC-----ARAPECCLINWYGTGARMGLHQDKDEADFAC----PVVSVS 137
Query: 387 VGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTML 446
+GD F G+ K E V L SGDV++ GGE+R HGV I S+ ALL
Sbjct: 138 LGDDGLFRMGNVERGGKTESVWLHSGDVVVMGGEARLRHHGVDRIRFGSS--ALLPQG-- 193
Query: 447 RPGRLNLTFR 456
GR+NLT R
Sbjct: 194 --GRINLTLR 201
>gi|390450506|ref|ZP_10236097.1| 2OG-Fe(II) oxygenase [Nitratireductor aquibiodomus RA22]
gi|389662409|gb|EIM73975.1| 2OG-Fe(II) oxygenase [Nitratireductor aquibiodomus RA22]
Length = 204
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 12/110 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VN Y + ++GLHQDRDE + PVVS S+GD+ F G + ++ V
Sbjct: 102 PEACLVNHYTEAAKMGLHQDRDEEAFLA----PVVSVSLGDTCLFRVGGTKRGDRTVSVK 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTML-RPGRLNLTFRQ 457
L+SGDV++ GG R FHGV I P + +T+L PGR+NLT R+
Sbjct: 158 LQSGDVVVLGGAGRLAFHGVDRIYPGT-------STLLSAPGRINLTLRR 200
>gi|421140400|ref|ZP_15600413.1| 2OG-Fe(II) oxygenase [Pseudomonas fluorescens BBc6R8]
gi|404508459|gb|EKA22416.1| 2OG-Fe(II) oxygenase [Pseudomonas fluorescens BBc6R8]
Length = 226
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 11/110 (10%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD C++N Y ++ LHQD++E RY+ PVVS S+G A FL+G ++K +K
Sbjct: 125 FEPDACLINRYVPGAKMSLHQDKNERRYAA----PVVSVSLGLPAIFLFGGHERSDKTQK 180
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
V L GDV+++GG R FHGV I P + P ++ P R+NLTFR
Sbjct: 181 VSLFHGDVVVWGGVDRLRFHGVMPIKPGTHP-------VMGPQRINLTFR 223
>gi|395795000|ref|ZP_10474313.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
Ag1]
gi|395340824|gb|EJF72652.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
Ag1]
Length = 226
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 11/110 (10%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD C++N Y ++ LHQD++E RY+ PVVS S+G A FL+G ++K +K
Sbjct: 125 FEPDACLINRYVPGAKMSLHQDKNERRYAA----PVVSVSLGLPAIFLFGGHERSDKTQK 180
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
V L GDV+++GG R FHGV I P + P ++ P R+NLTFR
Sbjct: 181 VSLFHGDVVVWGGVDRLRFHGVMPIKPGTHP-------VMGPQRINLTFR 223
>gi|163745057|ref|ZP_02152417.1| 2OG-Fe(II) oxygenase [Oceanibulbus indolifex HEL-45]
gi|161381875|gb|EDQ06284.1| 2OG-Fe(II) oxygenase [Oceanibulbus indolifex HEL-45]
Length = 200
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 72/127 (56%), Gaps = 12/127 (9%)
Query: 332 KMDSKVSNVEDILPALS--PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGD 389
++ + + + D L L P+ C++N+Y+ R+GLHQDRDE+ + PVVS S+GD
Sbjct: 81 EIPAPILAIWDQLTGLERRPECCLINYYDADARMGLHQDRDEADFQW----PVVSVSLGD 136
Query: 390 SAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG 449
F G+ K E + L+SGDV++ GG++R +HGV I ++ + + G
Sbjct: 137 DGLFRIGNLTRGGKTESIWLQSGDVVVMGGDARLTYHGVDRIKSGTS------TLLPKGG 190
Query: 450 RLNLTFR 456
R+NLT R
Sbjct: 191 RINLTLR 197
>gi|90420982|ref|ZP_01228886.1| AlkB, alkylated DNA repair protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90334760|gb|EAS48536.1| AlkB, alkylated DNA repair protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 203
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 103/228 (45%), Gaps = 36/228 (15%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGY-NDGAKLRLRMM-CLGLDW- 291
+L G+ + +L+ EQ+ +V +E+ Y+P G L +RM C L W
Sbjct: 3 VLPKGVRHIPGHLSRDEQVALVDAVREVVAA-APLYRPEMPRTGKPLSVRMTNCGELGWV 61
Query: 292 -DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPD 350
D +Y V IP + ++ Q + H P
Sbjct: 62 TDRSGYRYQPVHPVTRTPWPAIPPKLLEIWQELAAYDH-------------------PPQ 102
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLE 410
C+VNFY + ++GLHQD+DE+ S PVVS S+GD F G+ + + L
Sbjct: 103 ACLVNFYEDTAKMGLHQDKDETDLSA----PVVSVSLGDDCLFRVGETTRGGRTTSIRLH 158
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP-GRLNLTFRQ 457
SGDV++ GGE R +HGV I P + +T+L+ GR+NLT R+
Sbjct: 159 SGDVVVLGGEGRLAYHGVDRIYPAT-------STLLKKGGRINLTLRR 199
>gi|255080234|ref|XP_002503697.1| predicted protein [Micromonas sp. RCC299]
gi|226518964|gb|ACO64955.1| predicted protein [Micromonas sp. RCC299]
Length = 334
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 31/229 (13%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGG---FYQ--PGYNDGAKLRLRMMCLGL 289
+L PG+V L+ + + Q + E+G+G G FY PG G LR+
Sbjct: 102 VLAPGLVCLRRAIDLETQAWLAERAFEVGEGKDGRQGFYNTVPGDAPGDAPVLRL----- 156
Query: 290 DWDPQTRKYGKKRQVDGCEPSVIP-SEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALS 348
G + +V ++P S+F + + R + + +NV P ++
Sbjct: 157 -------NQGTRGRV------ILPVSDFPERLGRIVRGCVRCAQTADSCTNV----PDMN 199
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSL-KKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
P +VNFY + H+D ++ ++ G P+VSF+VG SA+F Y + + V
Sbjct: 200 PTTALVNFYKEGAKFKWHRDSEDPAHARHDTGPPIVSFTVGLSADFSYKNRFEDATHRTV 259
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L SGDVL+FGG SR + H V+ + P + P +L ML GRLN+T R
Sbjct: 260 RLNSGDVLLFGGPSRMIVHSVTGVVPRTMP-PMLRGRMLH-GRLNVTVR 306
>gi|126738438|ref|ZP_01754143.1| alkylated DNA repair protein, putative [Roseobacter sp. SK209-2-6]
gi|126720237|gb|EBA16943.1| alkylated DNA repair protein, putative [Roseobacter sp. SK209-2-6]
Length = 205
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 63/108 (58%), Gaps = 10/108 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N+Y ++GLHQD+DE+ +S PVVS S+GD F G + K E +
Sbjct: 105 PDCCLLNYYGEGAKMGLHQDKDEADFSY----PVVSISLGDDGLFRIGGAQRGGKTESIW 160
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L SGDV++ GGE+R +HGV I S+ + + GR+NLT R
Sbjct: 161 LNSGDVVVMGGEARLTYHGVDRIRYKSS------RLLPKGGRINLTLR 202
>gi|346994859|ref|ZP_08862931.1| alkylated DNA repair protein [Ruegeria sp. TW15]
Length = 215
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 103/226 (45%), Gaps = 36/226 (15%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDWDP 293
+L G + K YL Q +V + + + K Y+P G ++ +RM G L W
Sbjct: 19 LLLRGFDIRKGYLDAVSQTRLVDLLRPILKA-APLYRPFTPSGKEMSVRMTSAGALGW-- 75
Query: 294 QTRKYGKKRQ---VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPD 350
T + G + Q G IP + + Q V+ E PD
Sbjct: 76 VTDRAGYRYQDTHPKGMTWPAIPDDILTIWQ--------------DVTGAER-----QPD 116
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLE 410
C++N+Y ++GLHQD+DE+ +S PV+S S+GD A F G+ K E + L
Sbjct: 117 CCLINYYGEGTKMGLHQDKDEADFSW----PVLSISLGDDALFRIGNTTRGGKTESIWLS 172
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
SGDV+I GG +R +HG+ I S+ + + GR+NLT R
Sbjct: 173 SGDVVIMGGPARLTYHGIDRIRFGSS------KLLPKGGRINLTLR 212
>gi|339505659|ref|YP_004693079.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Roseobacter
litoralis Och 149]
gi|338759652|gb|AEI96116.1| putative alpha-ketoglutarate-dependent dioxygenase AlkB
[Roseobacter litoralis Och 149]
Length = 226
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 87/183 (47%), Gaps = 33/183 (18%)
Query: 277 GAKLRLRMMCLG-LDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKM 333
G ++ +RM G W D Q +Y DG E IP+ Q V + +S +
Sbjct: 71 GKQMSVRMTAAGNYGWITDRQGYRYATTHP-DGQEWPAIPASVLQ-VWKDLSSS------ 122
Query: 334 DSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEF 393
A P+ C+VNFY R+GLHQD+DE + PVVS S+GD F
Sbjct: 123 ------------ARDPECCLVNFYGEGARMGLHQDKDEGSFEF----PVVSISLGDEGLF 166
Query: 394 LYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNL 453
G K + V L+SGDV++ GG +R HGV I S+ +LLE + GRLNL
Sbjct: 167 RMGHAERGGKTQSVWLQSGDVVVMGGVARLAHHGVDRIRFGSS--SLLE----KGGRLNL 220
Query: 454 TFR 456
T R
Sbjct: 221 TLR 223
>gi|149202961|ref|ZP_01879932.1| alkylated DNA repair protein, putative [Roseovarius sp. TM1035]
gi|149143507|gb|EDM31543.1| alkylated DNA repair protein, putative [Roseovarius sp. TM1035]
Length = 202
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 10/108 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y R+GLHQDRDE+ ++ PV+S S+GD A F G+ K + +
Sbjct: 102 PDCCLINHYTGQARMGLHQDRDEADFTW----PVLSISLGDDALFRIGNVTRGGKTDSLW 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L SGDV++ GG +R V+HG+ I P ++ LL GR+NLT R
Sbjct: 158 LASGDVVVMGGAARLVYHGIDRIRPGTS--GLLRGG----GRINLTCR 199
>gi|389808166|ref|ZP_10204576.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodanobacter
thiooxydans LCS2]
gi|388443044|gb|EIL99203.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodanobacter
thiooxydans LCS2]
Length = 218
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 101/222 (45%), Gaps = 31/222 (13%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDWDPQTRK 297
G V+L+ + E L+ + + P F G ++ + M G L W R
Sbjct: 23 GAVVLRGFALAEESALLQAVAAITAQAP--FRHQLTPGGLRMSVAMTNAGPLGWTSDRRG 80
Query: 298 YG-KKRQVDGCEP-SVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
Y R D EP +P F +L + + A P PD C++N
Sbjct: 81 YRYAPRDPDSGEPWPPLPPAFMRLAVAAAAHAG---------------FPGFVPDACLLN 125
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVL 415
Y RL LHQDRDE GLP+VS S+G A FL+G + + ++V L GDV+
Sbjct: 126 RYEPGTRLSLHQDRDER----DLGLPIVSASLGIPAVFLFGGLQRTDPVQRVPLAHGDVV 181
Query: 416 IFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++GG +R FHGV + PN P AL E R+NL+FR+
Sbjct: 182 VWGGAARLRFHGVLPLKPNHHP-ALGEC------RINLSFRR 216
>gi|365859362|ref|ZP_09399232.1| putative alkylated DNA repair protein AlkB [Acetobacteraceae
bacterium AT-5844]
gi|363712721|gb|EHL96398.1| putative alkylated DNA repair protein AlkB [Acetobacteraceae
bacterium AT-5844]
Length = 214
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--DPQ 294
PG+ LL+ + E L+ I Q + P F G + + + C L W D +
Sbjct: 18 PGLTLLQGFALPAEDALLAGIEQVVQAAP--FRHMITPGGFAMSVALTNCGALGWVSDRR 75
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y G +P+ F L QR+ + P +PD C++
Sbjct: 76 GYRYQPNDPETGRLWPAMPAAFLDLAQRAAAAGG---------------FPGFTPDACLI 120
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
N Y RL LHQD++E +S P+VS S+G A FL+G + ++V L GDV
Sbjct: 121 NRYTPGARLTLHQDKNERDFSA----PIVSVSLGLPATFLFGGLERTDPQDRVALHHGDV 176
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+++GG +R +HG+ + P L P R+N+TFR
Sbjct: 177 VVWGGPTRLAYHGILPLKEGDHP-------RLGPCRINMTFR 211
>gi|118590470|ref|ZP_01547872.1| alkylated DNA repair protein [Stappia aggregata IAM 12614]
gi|118436933|gb|EAV43572.1| alkylated DNA repair protein [Stappia aggregata IAM 12614]
Length = 207
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 67/112 (59%), Gaps = 10/112 (8%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
A P+ C++NFY+ R+GLHQDRDE + PVVS S+GD+A F G + +
Sbjct: 102 APPPEACLINFYDQGARMGLHQDRDEQMFEA----PVVSVSLGDTATFRVGGLSRKDPTK 157
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+SGDV++ GGE+R FHG+ + ++ LL+N GR+NLT R+
Sbjct: 158 SFRLQSGDVVVLGGEARLAFHGIDRVLAGTS--TLLKNG----GRINLTLRR 203
>gi|271499400|ref|YP_003332425.1| 2OG-Fe(II) oxygenase [Dickeya dadantii Ech586]
gi|270342955|gb|ACZ75720.1| 2OG-Fe(II) oxygenase [Dickeya dadantii Ech586]
Length = 217
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 232 REGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLD 290
R L PG V+L+ + + +L+ + + P F G + + M C L
Sbjct: 14 RNETLAPGAVVLRGFAWPQADVLLAALETVTQRAP--FRHMVTPGGHTMSVAMSNCGPLG 71
Query: 291 W--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALS 348
W D +Y + + G +P+ F QL Q + EA D +
Sbjct: 72 WVSDEHGYRYSAQDPLSGQPWPAMPACFLQLSQAAAREA-----------GYHD----FT 116
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y +L LHQD+DE L P+VS S+G SA FL+G + ++ +++
Sbjct: 117 PDACLINRYAVGAKLSLHQDKDE----LDLRQPIVSVSLGLSAVFLFGGMKRSDPCQRLT 172
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L GDV+++GG SR +H + + P +L+ RLNLTFR
Sbjct: 173 LMHGDVVVWGGPSRLCYHAILPLKRGPLPMGILDEV-----RLNLTFR 215
>gi|21328693|gb|AAM48699.1| DNA alkylation damage repair protein AlkB, putative [uncultured
marine proteobacterium]
Length = 212
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 239 GMVLLKHYLTIREQILIVRICQELG-KGPGGFYQPGYNDGAKLRLRMMCLG-LDWDPQTR 296
G+ + K +L+ +Q+ +V+ + + + P + P G + +R+ G W R
Sbjct: 20 GISVFKEFLSPSDQLHLVKELRAVAAQAP--VFSPKTKSGKPMSVRLTAAGDFGWFSDQR 77
Query: 297 KYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
Y Q G IP + R+++ A V D P+ C+VN
Sbjct: 78 GYRYVEQHPSGVNWPEIPDAI-MAIWRAVAGA------------VPD------PECCLVN 118
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVL 415
FY R+GLHQDRDE+ + PVVS S+GD A F G K E + L+SGDV
Sbjct: 119 FYGDGARMGLHQDRDEANFDW----PVVSISLGDDALFRVGGTERGGKTESIWLQSGDVA 174
Query: 416 IFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ GG +R +HG+ I S+ +LL+ GRLN+T R
Sbjct: 175 VMGGAARLNYHGIDRIKFGSS--SLLKEG----GRLNVTLR 209
>gi|119898584|ref|YP_933797.1| DNA-directed DNA polymerase [Azoarcus sp. BH72]
gi|119670997|emb|CAL94910.1| DNA-directed DNA polymerase [Azoarcus sp. BH72]
Length = 221
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 35/227 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG VLL+ + + L+ + + P F +G ++ + M C L W D
Sbjct: 21 LAPGAVLLRQRALAQAEALLAGVAEVTAVAP--FRWMSTPNGYRMSVAMTNCGALGWVSD 78
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
+Y +P+ F +L +++ ++A PA PD C
Sbjct: 79 ATGYRYAPLDPARDAPWPAMPAAFLELARQAAADAG---------------FPAFEPDAC 123
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
+VN Y RL LHQDR+E +S P+VS S+G A F +G R + + LLE G
Sbjct: 124 LVNRYAPGARLSLHQDRNEHDFSQ----PIVSVSLGLPAAFQFGGLRRGDPVTRYLLEHG 179
Query: 413 DVLIFGGESRHVFHGVSSI--NPNSAPGALLENTMLRPGRLNLTFRQ 457
DV+++GG +R +HGV ++ ++A GA R+NLTFR+
Sbjct: 180 DVVVWGGPARLRYHGVLALKDGEHAATGAC---------RINLTFRR 217
>gi|259907960|ref|YP_002648316.1| DNA repair system specific for alkylated DNA [Erwinia pyrifoliae
Ep1/96]
gi|387870759|ref|YP_005802131.1| alpha-ketoglutarate-dependent dioxygenase alkB [Erwinia pyrifoliae
DSM 12163]
gi|224963582|emb|CAX55072.1| DNA repair system specific for alkylated DNA [Erwinia pyrifoliae
Ep1/96]
gi|283477844|emb|CAY73760.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Erwinia pyrifoliae
DSM 12163]
Length = 213
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 32/176 (18%)
Query: 286 CLGLDWDPQTR--KYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W +R +Y + + +G +P +F+QL Q EA
Sbjct: 64 CGDLGWSTDSRGYQYSAQDEANGQRWPAMPPQFRQLAQECAREAG--------------- 108
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
+PD C++N Y ++ LHQD+DE L++ P+VS S+G A FL+G +
Sbjct: 109 FSGFNPDACLINRYEPGAKMTLHQDKDER--DLRQ--PIVSVSLGLPAVFLFGGFERGDA 164
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFRQ 457
+++VLLE GDV+++GG SR +HG+ + P GA R NLTFR+
Sbjct: 165 SQRVLLEHGDVVVWGGPSRLRYHGILPLKAGIHPLTGAF---------RFNLTFRR 211
>gi|254440426|ref|ZP_05053920.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Octadecabacter
antarcticus 307]
gi|198255872|gb|EDY80186.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Octadecabacter
antarcticus 307]
Length = 211
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 10/111 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
A P+ C+VN Y + ++G+HQDRDE+ + G PVVS S+GD F G+ K E
Sbjct: 108 ARVPECCLVNLYRETAKMGMHQDRDEAEF----GEPVVSVSLGDDGLFRIGNTTRGGKTE 163
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ L+SGDV++ GG++R V+HG+ S+ LL GR+NLT R
Sbjct: 164 SIWLKSGDVVVMGGDARLVYHGIDKTRAGSS--TLLSGG----GRINLTLR 208
>gi|408376113|ref|ZP_11173718.1| 2OG-Fe(II) oxygenase [Agrobacterium albertimagni AOL15]
gi|407749580|gb|EKF61091.1| 2OG-Fe(II) oxygenase [Agrobacterium albertimagni AOL15]
Length = 209
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 67/110 (60%), Gaps = 12/110 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY ++GLHQDRDE+ ++ PV+S S+G++ F G ++ + +
Sbjct: 108 PEACLVNFYADDAKMGLHQDRDETEFAA----PVLSISLGNTCLFRIGGLARTDRTQSLK 163
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP-GRLNLTFRQ 457
LESGDV + GGE R FHGV I P ++ T+L+ GR+NLT R+
Sbjct: 164 LESGDVFLLGGEGRLCFHGVDRIYPGTS-------TLLKSGGRINLTLRR 206
>gi|384085273|ref|ZP_09996448.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acidithiobacillus
thiooxidans ATCC 19377]
Length = 217
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 326 EAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSF 385
E A+I ++ ++ + +PD C+VN Y R+ LHQDRDE P+VS
Sbjct: 95 EIPAIILNLAQAASKKAGFAGFTPDACLVNVYVPGARMSLHQDRDEQDMDA----PIVSI 150
Query: 386 SVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTM 445
S+G A FL+G + +K +++ +E GDVL++GG +R +HGV+ I P E+ +
Sbjct: 151 SLGLPATFLFGGAQRRDKVKRIFVEHGDVLVWGGPARLRYHGVAPIKPG-------EHPL 203
Query: 446 LRPGRLNLTFRQ 457
+ R+NLT R+
Sbjct: 204 VGARRINLTLRK 215
>gi|254488356|ref|ZP_05101561.1| 2OG-Fe(II) oxygenase [Roseobacter sp. GAI101]
gi|214045225|gb|EEB85863.1| 2OG-Fe(II) oxygenase [Roseobacter sp. GAI101]
Length = 200
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 27/188 (14%)
Query: 269 FYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAH 328
F++P G K+ +RM G KYG +G + P+ ++ +A
Sbjct: 37 FFRPVTPGGQKMSVRMTSAG--------KYGWYSDAEGYRYA--PTHPNGTPWPAIPDA- 85
Query: 329 ALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVG 388
AL D +++ +E P+ C++N+Y++ R+G+HQDRDE+ + PVVS S+G
Sbjct: 86 ALAIWD-RLTGLER-----HPECCLINYYDSDARMGMHQDRDEADFRW----PVVSVSLG 135
Query: 389 DSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP 448
D F G ++ K + + L+SGDV++ GGE+R HG+ I S+ + +
Sbjct: 136 DEGLFRIGGQKRGGKTDSIWLQSGDVVVMGGEARLHHHGIDRIRAGSS------KLLPKG 189
Query: 449 GRLNLTFR 456
GR+NLT R
Sbjct: 190 GRINLTLR 197
>gi|83945054|ref|ZP_00957420.1| alkylated DNA repair protein [Oceanicaulis sp. HTCC2633]
gi|83851836|gb|EAP89691.1| alkylated DNA repair protein [Oceanicaulis sp. HTCC2633]
Length = 221
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 241 VLLKHYLTIREQILIVRICQELGKGPGGFYQPGY-NDGAKLRLRMMCLG-LDWDPQTRKY 298
+L H+ + L + + + P YQP G L ++M LG L W T K
Sbjct: 25 LLSGHFDRQAQSRLAAEVLDRVARSP--LYQPAMPRTGKPLSVQMTNLGPLGW--MTDKV 80
Query: 299 GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYN 358
G R + + P M EA L+K+ +VS D P C+VN+Y
Sbjct: 81 GGYRYQEHHPVTGAPWP-------DMPEA--LLKLWREVSGWPD-----PPQACLVNWYG 126
Query: 359 TSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFG 418
R+GLH D DE + PVVS S+GDSA F G V L SGDV++ G
Sbjct: 127 PDARMGLHVDADED----AQDAPVVSVSLGDSARFRLGGPDRKGPTRSVRLNSGDVVVLG 182
Query: 419 GESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
G SR HGV I S+ LL RPGRLNLT R+
Sbjct: 183 GRSRRFHHGVDRIFAGSS--TLLPEDW-RPGRLNLTLRR 218
>gi|395006635|ref|ZP_10390444.1| alkylated DNA repair protein [Acidovorax sp. CF316]
gi|394315415|gb|EJE52220.1| alkylated DNA repair protein [Acidovorax sp. CF316]
Length = 223
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 111/247 (44%), Gaps = 36/247 (14%)
Query: 216 FRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYN 275
F E+E Q TR+ + PG VLL+ + L+ + G P F
Sbjct: 6 FGHEEEAALLQQQAGTRQAV-APGAVLLRGFALDVAPALLQAVDGIAGHAP--FRHLETP 62
Query: 276 DGAKLRLRMMCLG-LDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIK 332
G ++ + M G L W D +YG+ + G +P+ F L + A
Sbjct: 63 GGQRMSVAMTNSGPLGWISDRSGYRYGRADPLSGRPWPPLPAVFATLAHGAADAAGFAGF 122
Query: 333 MDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAE 392
+PD C++N Y RL LHQD+DE + G P+VS S+G A
Sbjct: 123 ---------------APDACLINRYAPGARLSLHQDKDERNH----GHPIVSVSLGIPAV 163
Query: 393 FLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGR 450
FL+G + A+KA+++ L GDV+++GG +R +HGV + P GAL R
Sbjct: 164 FLFGGDARADKAQRIPLVHGDVVVWGGPARLRYHGVMPLAEAEHPLTGAL---------R 214
Query: 451 LNLTFRQ 457
+NLTFR+
Sbjct: 215 INLTFRK 221
>gi|377576511|ref|ZP_09805495.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia
hermannii NBRC 105704]
gi|377542543|dbj|GAB50660.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia
hermannii NBRC 105704]
Length = 216
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 33/225 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG V+L+ + L+ I + P F G + + M C L W
Sbjct: 15 LAPGAVILRRFARQESAQLMTAIQHVAAQSP--FRHMVTPGGYTMSVAMTNCGSLGWTTN 72
Query: 295 TRKY---GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
TR Y Q D P+ +P F+ L + S+ + D +PD
Sbjct: 73 TRGYLYAPVDPQTDQPWPA-MPDSFQHLCDAA-----------SRAAGYPD----FAPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE + P+VS S+G A F +G + ++V+LE
Sbjct: 117 CLINRYEPGAKLSLHQDKDEPNLAA----PIVSVSLGLPAVFQFGGLTRSAPLQRVMLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GDV+++GG SR V+HG+ + P P L + R NLTFR
Sbjct: 173 GDVVVWGGPSRLVYHGIQPLKPGDHP---LTGSY----RYNLTFR 210
>gi|227115211|ref|ZP_03828867.1| alkylated DNA repair protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 218
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 76/146 (52%), Gaps = 24/146 (16%)
Query: 312 IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDE 371
+P F +L Q++ SEA PD C++N Y+ R+ LHQD++E
Sbjct: 95 MPEVFSRLAQQAASEAG---------------FADFEPDACLINRYDVGTRMSLHQDKNE 139
Query: 372 SRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
+ P+VS S+G SA FL+G ++KA++V L GDV+++GGESR FHG+ +
Sbjct: 140 RDFHQ----PIVSVSLGLSATFLFGGMARSDKAQRVALTHGDVVVWGGESRLYFHGILPL 195
Query: 432 NPNSAPGALLENTMLRPGRLNLTFRQ 457
P + + R NLTFR+
Sbjct: 196 KSGIMPEGIPDEC-----RFNLTFRK 216
>gi|253687194|ref|YP_003016384.1| 2OG-Fe(II) oxygenase [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251753772|gb|ACT11848.1| 2OG-Fe(II) oxygenase [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 218
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 83/174 (47%), Gaps = 26/174 (14%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D + +Y + G +P F +L Q++ EA
Sbjct: 67 CGKLGWVTDERGYRYTSHDPLSGEAWPDMPEVFSRLAQQAAREAG--------------- 111
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
PD C++N Y+ R+ LHQD++E + P+VS S+G SA FL+G ++K
Sbjct: 112 FADFEPDACLINRYDVGTRMSLHQDKNERDFRQ----PIVSVSLGLSATFLFGGMARSDK 167
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++V L GDV+++GGESR FHG+ + P + + R NLTFR+
Sbjct: 168 VQRVALTHGDVVVWGGESRLYFHGILPLKSGGVPEGMSDEC-----RFNLTFRK 216
>gi|116696312|ref|YP_841888.1| alkylated DNA repair protein [Ralstonia eutropha H16]
gi|113530811|emb|CAJ97158.1| Alkylated DNA repair protein [Ralstonia eutropha H16]
Length = 220
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 67/109 (61%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y RL LHQDRDE +S P+VS S+G A FL+G R A++ ++V
Sbjct: 121 PDACLINRYEPGTRLSLHQDRDERDFSA----PIVSVSLGLPAVFLFGGMRRADRPQRVR 176
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG SR FHGV AP A ++ +L R+NLTFR+
Sbjct: 177 LAHGDVVVWGGPSRLAFHGV-------APLADGDHPLLGRLRINLTFRK 218
>gi|114762073|ref|ZP_01441541.1| alkylated DNA repair protein, putative [Pelagibaca bermudensis
HTCC2601]
gi|114545097|gb|EAU48100.1| alkylated DNA repair protein, putative [Roseovarius sp. HTCC2601]
Length = 201
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 96/208 (46%), Gaps = 33/208 (15%)
Query: 251 EQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDWDPQTRKYG-KKRQVDGCE 308
++ LI R+ L P YQP G K+ +RM G W R Y + R +G +
Sbjct: 22 QEALIERLRDCLRFAP--LYQPVTPRGQKMSVRMSAAGRFGWVTDRRGYRYEPRHPEGMD 79
Query: 309 PSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQD 368
IP E ++ + VS A P+ C++N+Y R+GLHQD
Sbjct: 80 WPPIPEE--------------VLAIWRDVSGC-----AREPECCLINWYGEGARMGLHQD 120
Query: 369 RDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGV 428
+DE+ ++ PVVS S+GD F G+ K E V L SG V++ GGE+R HGV
Sbjct: 121 KDEADFAC----PVVSVSLGDDGLFRMGNTERGGKTESVWLGSGAVVVMGGEARLRHHGV 176
Query: 429 SSINPNSAPGALLENTMLRPGRLNLTFR 456
I S+ + + GR+NLT R
Sbjct: 177 DRIRFGSS------TLLPQGGRINLTLR 198
>gi|254491464|ref|ZP_05104643.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Methylophaga
thiooxidans DMS010]
gi|224462942|gb|EEF79212.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Methylophaga
thiooxydans DMS010]
Length = 212
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD+C++N Y +GLHQD+DE +S P+VS S+G A FL+G + +K
Sbjct: 111 FKPDVCLINCYQPGAGMGLHQDKDEKDFSA----PIVSVSLGVPAIFLFGGAKRQDKPSA 166
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
LL++GDV+++GGE R FHGV I L + M R NLT RQ
Sbjct: 167 YLLKNGDVVVWGGEDRLRFHGVQPIK-------LAHHPMTGQKRFNLTIRQ 210
>gi|339323627|ref|YP_004682521.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cupriavidus necator
N-1]
gi|338170235|gb|AEI81289.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cupriavidus necator
N-1]
Length = 220
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 67/109 (61%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y RL LHQDRDE +S P+VS S+G A FL+G R A++ ++V
Sbjct: 121 PDACLINRYEPGTRLSLHQDRDERDFSA----PIVSVSLGLPAVFLFGGMRRADRPQRVR 176
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG SR FHGV AP A ++ +L R+NLTFR+
Sbjct: 177 LAHGDVVVWGGPSRLAFHGV-------APLADGDHPLLGRLRINLTFRK 218
>gi|110635828|ref|YP_676036.1| 2OG-Fe(II) oxygenase [Chelativorans sp. BNC1]
gi|110286812|gb|ABG64871.1| 2OG-Fe(II) oxygenase [Chelativorans sp. BNC1]
Length = 204
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 65/110 (59%), Gaps = 10/110 (9%)
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
SP+ C++NFY+ ++GLHQDRDE ++ PVVS S+GD F G +
Sbjct: 101 SPEACLINFYSQDAKMGLHQDRDEKNFAA----PVVSVSLGDDCLFRVGGNDRESGTASF 156
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGDV++ GGE R FHGV I P+++ LL+N GR+NLT R+
Sbjct: 157 RLSSGDVVVLGGEGRLAFHGVDRIYPHTS--DLLKNG----GRINLTLRR 200
>gi|344167472|emb|CCA79701.1| Alpha-ketoglutarate-dependent dioxygenase alkB (Alkylated DNA
repair protein alkB) [blood disease bacterium R229]
Length = 218
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 81/175 (46%), Gaps = 30/175 (17%)
Query: 286 CLGLDWDPQTRKY---GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVED 342
C L W Y + Q D P +P F +L + + +EA
Sbjct: 69 CGALGWTTDRHGYRYAARDPQTDQPWPP-LPGGFLRLARDAAAEAG-------------- 113
Query: 343 ILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDAN 402
P +PD C++N Y RL LHQD+DE Y G P+VS S+G A FL+G R +
Sbjct: 114 -FPGFTPDACLINRYVPGARLSLHQDKDEQDY----GAPIVSVSLGIPAVFLWGGHRRTD 168
Query: 403 KAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
K ++V L GDV+++GG R +HGV + P +L R+NLT R+
Sbjct: 169 KTQRVPLFHGDVVVWGGPDRLRYHGVLPLKEAGHP-------LLGAQRINLTLRR 216
>gi|399994567|ref|YP_006574807.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|398659122|gb|AFO93088.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 229
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 12/127 (9%)
Query: 332 KMDSKVSNVEDILPAL--SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGD 389
++ S++ ++ ++ L PD C++N+Y R+GLHQD+DE+ +S PVVS S+GD
Sbjct: 110 EIPSEILDIWRVITGLERQPDCCLINYYGEGARMGLHQDKDEADFSY----PVVSVSLGD 165
Query: 390 SAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG 449
G++ K + V L SGDV++ GG++R +HGV I S+ + + G
Sbjct: 166 DGLLRIGNQSRGGKTDTVWLNSGDVVVMGGDARLTYHGVDRIRFKSS------RLLPKGG 219
Query: 450 RLNLTFR 456
R+NLT R
Sbjct: 220 RINLTLR 226
>gi|319794532|ref|YP_004156172.1| 2og-fe(ii) oxygenase [Variovorax paradoxus EPS]
gi|315596995|gb|ADU38061.1| 2OG-Fe(II) oxygenase [Variovorax paradoxus EPS]
Length = 215
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 32/176 (18%)
Query: 286 CLGLDWDPQTR--KYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W R +Y G +P+ F +L + EA ++ D
Sbjct: 66 CGALGWTSDRRGYRYSPTDPDTGKSWPAMPASFARLAR----EAASVAGFDG-------- 113
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
+PD C+VN Y RL LHQD+DE Y G P+VS S+G A FL+G +K
Sbjct: 114 ---FAPDACLVNRYAPGARLSLHQDKDEHDY----GAPIVSVSLGMPAVFLFGGRARGDK 166
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSI--NPNSAPGALLENTMLRPGRLNLTFRQ 457
A ++ L+ GDV+++GGE R +HGV + P A G++ R+NLTFR+
Sbjct: 167 AVRIPLQHGDVVVWGGEDRLRYHGVLPLKDQPRPALGSV---------RINLTFRK 213
>gi|116623103|ref|YP_825259.1| DNA-N1-methyladenine dioxygenase [Candidatus Solibacter usitatus
Ellin6076]
gi|116226265|gb|ABJ84974.1| DNA-N1-methyladenine dioxygenase [Candidatus Solibacter usitatus
Ellin6076]
Length = 214
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 11/113 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P PD C+VN Y RL LHQD+DE+ Y+ P+VS S+G A F +G +
Sbjct: 111 PEFDPDACLVNRYEPGARLTLHQDKDETDYTA----PIVSVSLGLPAVFQFGGMIRKVRP 166
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++ LESGDV+++GG +R +HGV+ + P P + P R+NLTFR+
Sbjct: 167 RRMRLESGDVVVWGGPTRLAYHGVAPLKPGDHP-------LTGPFRINLTFRK 212
>gi|153010895|ref|YP_001372109.1| 2OG-Fe(II) oxygenase [Ochrobactrum anthropi ATCC 49188]
gi|151562783|gb|ABS16280.1| 2OG-Fe(II) oxygenase [Ochrobactrum anthropi ATCC 49188]
Length = 212
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 31/226 (13%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW-- 291
I PG VLL+ + E ++ + P F G ++ + M C W
Sbjct: 13 IRAPGAVLLRGFALPSEDAVLKAVADVSAVAP--FRHMTTPGGYRMSVAMTNCGEFGWIT 70
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
D +Y G +P F+ L Q + EA P +PD
Sbjct: 71 DRTGYRYSTDDPETGLLWPTMPDAFRALAQTAAREAG---------------YPDFAPDA 115
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE ++ P+VS S+G A F +G + + K +L
Sbjct: 116 CLINRYEPGAKLSLHQDKDEQDFNN----PIVSVSLGLPATFQFGGLKRTDPIAKYILHH 171
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GG SR +HG+ ++ E+ L P RLNLTFR+
Sbjct: 172 GDVVVWGGPSRLFYHGILALKRG-------EHEKLGPFRLNLTFRK 210
>gi|404317830|ref|ZP_10965763.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Ochrobactrum
anthropi CTS-325]
Length = 212
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 35/228 (15%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDP 293
IL PG VLL+ + E ++ + P F G ++ + M C W
Sbjct: 13 ILAPGAVLLRGFALPSEDAVLKAVADVSAVAP--FRHMTTPGGYRMSVAMTNCGEFGW-- 68
Query: 294 QTRKYGKKRQVDGCEPSVI----PSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP 349
T + G + D E ++ P F+ L Q + EA P +P
Sbjct: 69 VTDRTGYRYSTDDPETGLLWPTMPDAFRALAQTAAREAG---------------YPDFAP 113
Query: 350 DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLL 409
D C++N Y +L LHQD+DE ++ P+VS S+G A F +G + + K +L
Sbjct: 114 DACLINRYEPGAKLSLHQDKDEQDFNN----PIVSVSLGLPATFQFGGLKRTDPIAKYIL 169
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GG SR +HG+ ++ E+ L P R NLTFR+
Sbjct: 170 HHGDVVVWGGPSRLFYHGILALKRG-------EHEKLGPFRHNLTFRK 210
>gi|254502799|ref|ZP_05114950.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Labrenzia alexandrii
DFL-11]
gi|222438870|gb|EEE45549.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Labrenzia alexandrii
DFL-11]
Length = 207
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 269 FYQPGY-NDGAKLRLRMM-CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSM 324
+QP N G +RM C L W D + +Y G IP+ +L +
Sbjct: 40 LFQPVMPNTGKPFSVRMSNCGPLGWVSDINSYRYQPNHPETGLMWPAIPARLLELWKAVA 99
Query: 325 SEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVS 384
+A P+ C++NFY + R+GLHQDRDE+ + PVVS
Sbjct: 100 PDAP-------------------EPEACLINFYEPTARMGLHQDRDEAMFEA----PVVS 136
Query: 385 FSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENT 444
S+GD+A F G + + L SGDV++ GG++R +HG+ I S LL+N
Sbjct: 137 VSLGDTATFRVGGTNRKDPTKSFRLSSGDVVVLGGDARLAYHGIDRI--LSGTSKLLKNG 194
Query: 445 MLRPGRLNLTFRQ 457
GR+NLT R+
Sbjct: 195 ----GRINLTLRR 203
>gi|451942955|ref|YP_007463591.1| DNA repair protein [Corynebacterium halotolerans YIM 70093 = DSM
44683]
gi|451902342|gb|AGF71229.1| DNA repair protein [Corynebacterium halotolerans YIM 70093 = DSM
44683]
Length = 230
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 30/232 (12%)
Query: 235 ILRPGMVLLKHYLTIREQILIV----RICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
++ PG+ L +L + EQ +V I + + P ++P G ++ ++ LG
Sbjct: 17 LVAPGVAHLPGWLPVSEQERLVSQARAIARSVAGTPLAMHRPVVGTG-QMSAYILSLGRY 75
Query: 291 WDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILP----A 346
W +TR YG R + G + +P E+ +L + ++S A + E++ P A
Sbjct: 76 W--RTRPYGYVRSLGGVDVPAVPPEYGRLARAALSAASGV---------AEELAPWADGA 124
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-E 405
+ +VN+Y + +GLH D +E + PVVS S+GD A F G+ +
Sbjct: 125 FRAETALVNYYPSGASMGLHVDANEVSEA-----PVVSLSIGDEAVFRMGNVHGRTRPWS 179
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V L SGD+++FGG +R +HGV + +AP L GR+N+T RQ
Sbjct: 180 DVTLMSGDLVVFGGPARRAYHGVPVVRDGTAP----AGCGLCEGRINITIRQ 227
>gi|440286858|ref|YP_007339623.1| alkylated DNA repair protein [Enterobacteriaceae bacterium strain
FGI 57]
gi|440046380|gb|AGB77438.1| alkylated DNA repair protein [Enterobacteriaceae bacterium strain
FGI 57]
Length = 216
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 11/110 (10%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
SPD C++N Y +L LHQD+DE+ S P+VS S+G A F +G + + ++
Sbjct: 112 FSPDACLINRYLPGAKLSLHQDKDEATLSA----PIVSVSLGLPAVFQFGGLKRNDPLQR 167
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
VLLE GDV+++GGESR +HG+ + P P + P R NLTFR
Sbjct: 168 VLLEHGDVVVWGGESRLFYHGIQPLKPGHHP-------QVGPLRYNLTFR 210
>gi|104781900|ref|YP_608398.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions, repair of alkylated DNA [Pseudomonas
entomophila L48]
gi|95110887|emb|CAK15603.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions, repair of alkylated DNA [Pseudomonas
entomophila L48]
Length = 214
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 12/129 (9%)
Query: 329 ALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVG 388
L+ + S+ + V PD C+VN Y RL LHQDRDE Y G P+VS S+G
Sbjct: 96 VLLNLASQAAAVAG-FEGFVPDACLVNHYVPETRLSLHQDRDEQDY----GHPIVSISLG 150
Query: 389 DSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP 448
A FL+G + +++ +++ L GDVL++GGE R FHGV I P P L
Sbjct: 151 LPAVFLFGGLQRSDRTQRIPLNHGDVLVWGGEDRLRFHGVLPIKPGVHP-------RLGE 203
Query: 449 GRLNLTFRQ 457
R+NLT R+
Sbjct: 204 RRINLTLRK 212
>gi|227502316|ref|ZP_03932365.1| alkylated DNA repair protein [Corynebacterium accolens ATCC 49725]
gi|227076958|gb|EEI14921.1| alkylated DNA repair protein [Corynebacterium accolens ATCC 49725]
Length = 227
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 22/227 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKG----PGGFYQPGYNDGAKLRLRMMCLGLDW 291
+ PG+ + ++ I +Q ++V +E+ + P QP G ++ + + LG W
Sbjct: 13 VAPGVGHVPGWVGIGKQKVLVEETREIARAYAHTPMAMVQPRLKSGGQMSVFQLHLGRYW 72
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
Y R VD E + +P L R ++ AL + +E + P++
Sbjct: 73 -----HYPSYRYVDNMEGTRVPPVPDSL--RELAPV-ALRQAAQVAPELEPWVDNFVPEM 124
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLE 410
+VN+Y +G+H D E + PV+S S+GD A F G + K + V L
Sbjct: 125 ALVNYYPPGSAMGMHVDDSEGSPA-----PVISLSIGDEALFRIGHTENRTKPWDDVTLC 179
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGD+++FGG R +HGV +N G L E L+ GR+N+T RQ
Sbjct: 180 SGDLVVFGGPKRFAYHGVVRVN----DGTLPEGCGLQEGRINITIRQ 222
>gi|395449700|ref|YP_006389953.1| 2OG-Fe oxygenase [Pseudomonas putida ND6]
gi|388563697|gb|AFK72838.1| 2OG-Fe oxygenase [Pseudomonas putida ND6]
Length = 225
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y RL LHQDRDE + G P+VS S+G A FL+G + A+KA+++
Sbjct: 125 PDACLVNHYLPGTRLSLHQDRDEQDF----GQPIVSVSLGLPAVFLFGGLQRADKAQRIA 180
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L DVL++GGE R FHGV I P P L R+NLT R+
Sbjct: 181 LSHSDVLVWGGEDRLRFHGVLPIKPGVHP-------RLGERRINLTLRK 222
>gi|114769789|ref|ZP_01447399.1| alkylated DNA repair protein, putative [Rhodobacterales bacterium
HTCC2255]
gi|114549494|gb|EAU52376.1| alkylated DNA repair protein, putative [alpha proteobacterium
HTCC2255]
Length = 205
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 30/219 (13%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDWDPQTRK 297
G + K L I EQ ++ +E+ K P G K+ ++M G W
Sbjct: 13 GFKIFKDKLNIDEQNKLISDLREIAK-DAPLSSPLVPGGNKMSVKMTSAGKYGWFSDGEG 71
Query: 298 YGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFY 357
Y R +D C+P+ + + Q+ +++ + K ++E I PD C++N+Y
Sbjct: 72 Y---RYID-CQPN--GNNWPQI-------PGSILNIWKKFVSIERI-----PDCCLINYY 113
Query: 358 NTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIF 417
+ S ++GLHQD DE+ ++ PV+S S+GD A F G+ + K + L SGD+++
Sbjct: 114 SESAKMGLHQDNDEADFNW----PVLSISLGDDALFRIGNNKKGGKTDSFWLNSGDIVLM 169
Query: 418 GGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GG++R HGV I ++ LL+N GR+NLT R
Sbjct: 170 GGDARLKHHGVDRIRFGTS--RLLKNG----GRINLTLR 202
>gi|90423198|ref|YP_531568.1| 2OG-Fe(II) oxygenase [Rhodopseudomonas palustris BisB18]
gi|90105212|gb|ABD87249.1| DNA-N1-methyladenine dioxygenase [Rhodopseudomonas palustris
BisB18]
Length = 216
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 39/226 (17%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQTRK 297
G LL+ + E+ LI + L + P F Q G + + M C + W +
Sbjct: 21 GATLLRGFALADERELIAALRAILAEAP--FRQMITPGGHTMSVAMSNCGAVGWVTDRKG 78
Query: 298 YGKKRQVDGCEPSV------IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
Y + D +P +P+ L R+ SEA +N PD
Sbjct: 79 Y----RYDAIDPDSGRPWPPMPAVLMDLAVRAASEA--------GFAN-------FHPDA 119
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y ++ LHQD+DE+ ++ P+VS S+G A F++G + ++K ++ LE
Sbjct: 120 CLINRYVPGAKMSLHQDKDEADFTA----PIVSVSLGLPAVFMFGGAKRSDKPQRFALEH 175
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+ +GG +R FHGV+++ E+ +L R+NLTFR+
Sbjct: 176 GDVVAWGGAARLAFHGVAALKDG-------EHPLLGRQRINLTFRK 214
>gi|300690564|ref|YP_003751559.1| alpha-ketoglutarate-dependent dioxygenase alkB [Ralstonia
solanacearum PSI07]
gi|299077624|emb|CBJ50259.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Ralstonia
solanacearum PSI07]
Length = 218
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 81/175 (46%), Gaps = 30/175 (17%)
Query: 286 CLGLDWDPQTRKY---GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVED 342
C L W Y + Q D P +P F +L + + +EA
Sbjct: 69 CGALGWTTDRHGYRYAARDPQTDQPWPP-LPGCFLRLARDAAAEAG-------------- 113
Query: 343 ILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDAN 402
P +PD C++N Y RL LHQD+DE Y G P+VS S+G A FL+G R +
Sbjct: 114 -FPGFTPDACLINRYVPGARLSLHQDKDEQDY----GAPIVSVSLGIPAVFLWGGHRRTD 168
Query: 403 KAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
K ++V L GDV+++GG R +HGV + P +L R+NLT R+
Sbjct: 169 KTQRVPLFHGDVVVWGGPDRLRYHGVLPLKEAGHP-------LLGAQRINLTLRR 216
>gi|26990114|ref|NP_745539.1| 2OG-Fe(II) oxygenase [Pseudomonas putida KT2440]
gi|24985046|gb|AAN69003.1|AE016532_5 alkylated DNA repair protein AlkB [Pseudomonas putida KT2440]
Length = 215
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y RL LHQDRDE + G P+VS S+G A FL+G + A+KA+++
Sbjct: 115 PDACLVNHYLPGTRLSLHQDRDEQDF----GQPIVSVSLGLPAVFLFGGLQRADKAQRIA 170
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDVL++GG R FHGV I P P L R+NLT R+
Sbjct: 171 LSHGDVLVWGGVDRLRFHGVLPIKPGVHP-------RLGERRINLTLRK 212
>gi|344172262|emb|CCA84894.1| alpha-ketoglutarate-dependent dioxygenase alkB [Ralstonia syzygii
R24]
Length = 218
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 81/175 (46%), Gaps = 30/175 (17%)
Query: 286 CLGLDWDPQTRKY---GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVED 342
C L W Y + Q D P +P F +L + + +EA
Sbjct: 69 CGALGWTTDRHGYRYAARDPQTDQPWPP-LPGCFLRLARDAAAEAG-------------- 113
Query: 343 ILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDAN 402
P +PD C++N Y RL LHQD+DE Y G P+VS S+G A FL+G R +
Sbjct: 114 -FPGFTPDACLINRYVPGARLSLHQDKDEQDY----GAPIVSVSLGIPAVFLWGGHRRTD 168
Query: 403 KAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
K ++V L GDV+++GG R +HGV + P +L R+NLT R+
Sbjct: 169 KTQRVPLFHGDVVVWGGPDRLRYHGVLPLKEAGHP-------LLGAQRINLTLRR 216
>gi|400756111|ref|YP_006564479.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Phaeobacter
gallaeciensis 2.10]
gi|398655264|gb|AFO89234.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Phaeobacter
gallaeciensis 2.10]
Length = 229
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 10/108 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N+Y R+GLHQD+DE+ +S PVVS S+GD G++ K + V
Sbjct: 129 PDCCLINYYGEGARMGLHQDKDEADFSY----PVVSVSLGDDGLLRIGNQSRGGKTDTVW 184
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L SGDV++ GG++R +HGV I S+ + + GR+NLT R
Sbjct: 185 LNSGDVVVMGGDARLTYHGVDRIRFKSS------RLLPKGGRINLTLR 226
>gi|300717602|ref|YP_003742405.1| DNA repair system specific for alkylated DNA [Erwinia billingiae
Eb661]
gi|299063438|emb|CAX60558.1| DNA repair system specific for alkylated DNA [Erwinia billingiae
Eb661]
Length = 214
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 82/176 (46%), Gaps = 32/176 (18%)
Query: 286 CLGLDWDPQTR--KYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C W +R +Y ++ G +P F+QL + EA
Sbjct: 64 CGDFGWSTDSRGYQYSERDNASGLRWPAMPDRFRQLARECADEAG--------------- 108
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
+PD C++N Y +L LHQD+DE LK+ P+VS S+G A F +G +
Sbjct: 109 FAQFNPDACLINRYEPGAKLTLHQDKDEQ--DLKQ--PIVSVSLGLPAVFQFGGFDRGDA 164
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFRQ 457
++VLLE GD++++GG SR FHG+ + P P GA R NLTFR+
Sbjct: 165 TQRVLLEHGDIVVWGGPSRLRFHGILPLKPGIHPLTGAF---------RYNLTFRR 211
>gi|146312434|ref|YP_001177508.1| DNA-N1-methyladenine dioxygenase [Enterobacter sp. 638]
gi|145319310|gb|ABP61457.1| DNA-N1-methyladenine dioxygenase [Enterobacter sp. 638]
Length = 216
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 286 CLGLDWDPQTRKY--GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C GL W R Y V C IP+ F L + A
Sbjct: 64 CGGLGWTTNDRGYLYSSVDPVTQCPWPPIPAVFNALCHEAAVAAG--------------- 108
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C++N Y +L LHQD+DE +L+ P+VS S+G A F +G + +
Sbjct: 109 YPEFQPDACLINRYAPGAKLSLHQDKDEP--NLRA--PIVSVSLGLPAIFQFGGLQRNDP 164
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++++LE GDV+++GGESR +HG+ + P P + R NLTFRQ
Sbjct: 165 LKRLMLEHGDVVVWGGESRLFYHGIQPLKPGQHP-------LTGEYRYNLTFRQ 211
>gi|86136819|ref|ZP_01055397.1| alkylated DNA repair protein, putative [Roseobacter sp. MED193]
gi|85826143|gb|EAQ46340.1| alkylated DNA repair protein, putative [Roseobacter sp. MED193]
Length = 200
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--DPQT 295
G + K YL + Q ++ + + + + + P G KL +RM G W D
Sbjct: 8 GFEIHKGYLDLASQRALIEVLRPILR-TAPLFSPTAPGGRKLSVRMTSAGKFGWIADETG 66
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y +K P++ +L+ + +V+ ++ PD C++N
Sbjct: 67 YRYVEKHPKGMGWPAI---------------PDSLLALWHEVTGLQR-----QPDSCLLN 106
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVL 415
++ ++GLHQD+DE+ +S PVVS S+GD F GD + K + + L SGDV+
Sbjct: 107 YFGPDAKMGLHQDKDEADFSF----PVVSISLGDDGLFRMGDTQRGGKTDSIWLNSGDVV 162
Query: 416 IFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ GG +R +HGV I S+ + + GR+NLT R
Sbjct: 163 VMGGAARLAYHGVDRIRFQSS------RLLPKGGRINLTLR 197
>gi|372275014|ref|ZP_09511050.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pantoea sp. SL1_M5]
Length = 213
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 28/174 (16%)
Query: 286 CLGLDWDPQTRKYGKKRQ--VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C W +R Y ++Q ++G + +P F+ L Q++ +EA
Sbjct: 64 CGDFGWSVDSRGYQYQQQDNLNGRKWPAMPPLFRTLAQQAATEAG--------------- 108
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
+PD C++N Y +L LHQD+DE L++ P+VS S+G A F +G +
Sbjct: 109 FSGFNPDACLLNRYEPGAKLTLHQDKDEK--DLRQ--PIVSVSLGLPAVFQFGGFERGDS 164
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++VLLE GD++++GG SR +HG+ + P P ++ R NLTFR+
Sbjct: 165 TQRVLLEHGDIVVWGGPSRLRYHGILPLKPGVHP-------LVGAWRYNLTFRR 211
>gi|254452509|ref|ZP_05065946.1| alkylated DNA repair protein [Octadecabacter arcticus 238]
gi|198266915|gb|EDY91185.1| alkylated DNA repair protein [Octadecabacter arcticus 238]
Length = 197
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 65/111 (58%), Gaps = 10/111 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
A +P+ C+VN Y + ++G+HQDRDE+ + PVVS S+GD F G+ K E
Sbjct: 94 ARAPECCLVNLYREAAKMGMHQDRDETEFDE----PVVSVSLGDDGLFRIGNTTRGGKTE 149
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ L+SGDV++ GG++R V+HG+ S+ LL GR+NLT R
Sbjct: 150 SIWLKSGDVVVMGGDARLVYHGIDKTRAGSS--TLLSGG----GRINLTLR 194
>gi|418939452|ref|ZP_13492850.1| 2OG-Fe(II) oxygenase [Rhizobium sp. PDO1-076]
gi|375053914|gb|EHS50311.1| 2OG-Fe(II) oxygenase [Rhizobium sp. PDO1-076]
Length = 206
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY ++GLHQDRDE+ ++ PVVS S+G+S F G ++ +
Sbjct: 105 PEACLVNFYGDDAKMGLHQDRDETDFNA----PVVSVSLGNSCLFRIGGLERKDRTSSLK 160
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+SGDV + GG R FHGV I P ++ LL+N GR+NLT R+
Sbjct: 161 LDSGDVFVLGGAGRLCFHGVDRIYPGTS--TLLKNG----GRINLTLRR 203
>gi|294769214|gb|ADF36486.1| caffeine degradation related protein [Pseudomonas putida]
Length = 219
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y RL LHQDRDE + G P+VS S+G A FL+G + A+KA+++
Sbjct: 119 PDACLVNHYLPGTRLSLHQDRDEQDF----GQPIVSVSLGLPAVFLFGGLQRADKAQRIA 174
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDVL++GG R FHGV I P P L R+NLT R+
Sbjct: 175 LSHGDVLVWGGVDRLRFHGVLPIKPGVHP-------RLGERRINLTLRK 216
>gi|149374533|ref|ZP_01892307.1| 2OG-Fe(II) oxygenase [Marinobacter algicola DG893]
gi|149361236|gb|EDM49686.1| 2OG-Fe(II) oxygenase [Marinobacter algicola DG893]
Length = 216
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 31/222 (13%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDWDPQTRK 297
G V+L+ + L+ I + P F Q G + + M C G W TR
Sbjct: 21 GAVVLRRFACADASELLEVIEGLAEQAP--FRQMQTPGGHTMSVAMTCCGEWGWVTDTRG 78
Query: 298 YGKKRQ--VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
Y +R + G ++P+ F+ L + S A S E PD C+VN
Sbjct: 79 YRYQRTDPLSGEPWPLMPTMFRSLAVMAASAA--------GYSKFE-------PDACLVN 123
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVL 415
Y ++GLHQD+DE + P+VS S+G A F +G R +++ ++V LE+GDV+
Sbjct: 124 RYAPGAKMGLHQDKDEDDFDQ----PIVSVSLGTPAMFQFGGARRSDRPQRVPLENGDVV 179
Query: 416 IFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++GG +R +HGV ++ ++++ R NLTFR+
Sbjct: 180 VWGGPARLRYHGVLTLKQA-------QHSLTGDSRYNLTFRR 214
>gi|418528092|ref|ZP_13094042.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Comamonas
testosteroni ATCC 11996]
gi|371454468|gb|EHN67470.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Comamonas
testosteroni ATCC 11996]
Length = 224
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P +PD C++N Y R+GLH+D+DE Y+ P+VS S+G + FL+G +
Sbjct: 111 PDFAPDACLINRYQPGARMGLHRDQDEHDYAA----PIVSVSLGLACSFLWGGLTRQSPT 166
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
++ L GDVL++GG SR VFHGV+ + P LL N R NLTFR
Sbjct: 167 RRLALTHGDVLVWGGRSRLVFHGVAPLKQGQHP--LLGNE-----RWNLTFR 211
>gi|241664018|ref|YP_002982378.1| 2OG-Fe(II) oxygenase [Ralstonia pickettii 12D]
gi|309781390|ref|ZP_07676126.1| alkylated DNA repair protein AlkB [Ralstonia sp. 5_7_47FAA]
gi|404396948|ref|ZP_10988742.1| alkylated DNA repair protein AlkB [Ralstonia sp. 5_2_56FAA]
gi|240866045|gb|ACS63706.1| 2OG-Fe(II) oxygenase [Ralstonia pickettii 12D]
gi|308919803|gb|EFP65464.1| alkylated DNA repair protein AlkB [Ralstonia sp. 5_7_47FAA]
gi|348617078|gb|EGY66559.1| alkylated DNA repair protein AlkB [Ralstonia sp. 5_2_56FAA]
Length = 218
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 26/172 (15%)
Query: 286 CLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILP 345
LG D + +Y + G +P F +L + +EA
Sbjct: 71 ALGWTSDRRGYRYATHDPLTGNPWPPLPDVFLRLAHNAAAEAG---------------FH 115
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+PD C++N Y R+ LHQD+DE Y G P+VS S+G A FL+G R A++ +
Sbjct: 116 GFTPDACLINRYVPGARMSLHQDKDEQDY----GAPIVSVSLGMPAVFLFGGHRRADRPQ 171
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++ L GDV+++GG R +HG++ + + + ML R+NLTFR+
Sbjct: 172 RIPLFHGDVVVWGGPDRLRYHGIAPLKDH-------PHAMLGSQRINLTFRK 216
>gi|291618152|ref|YP_003520894.1| AlkB [Pantoea ananatis LMG 20103]
gi|378766427|ref|YP_005194889.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pantoea ananatis
LMG 5342]
gi|386016480|ref|YP_005934767.1| alkylated DNA repair protein AlkB [Pantoea ananatis AJ13355]
gi|386078649|ref|YP_005992174.1| alkylated DNA repair protein AlkB [Pantoea ananatis PA13]
gi|291153182|gb|ADD77766.1| AlkB [Pantoea ananatis LMG 20103]
gi|327394549|dbj|BAK11971.1| alkylated DNA repair protein AlkB [Pantoea ananatis AJ13355]
gi|354987830|gb|AER31954.1| alkylated DNA repair protein AlkB [Pantoea ananatis PA13]
gi|365185902|emb|CCF08852.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pantoea ananatis
LMG 5342]
Length = 213
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 286 CLGLDWDPQTRKYGKKRQVDGCEPS--VIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C W R Y Q + +P F++L Q+S EA
Sbjct: 64 CGDFGWSTDARGYRYSEQDSSSQRPWPAMPDAFRRLAQQSAEEAG--------------- 108
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P +PD C+VN Y +L LHQD+DE L++ P+VS S+G +A F +G +
Sbjct: 109 FPGFNPDACLVNRYEPGAKLTLHQDKDEK--DLRQ--PIVSVSLGLAAVFQFGGFERGDH 164
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFRQ 457
A++VLLE GDV+++GG SR +HG+ + P GA R NLTFR+
Sbjct: 165 AQRVLLEHGDVVVWGGPSRLRYHGILPLKAGIHPLTGAF---------RYNLTFRR 211
>gi|374328832|ref|YP_005079016.1| AlkB, alkylated DNA repair protein [Pseudovibrio sp. FO-BEG1]
gi|359341620|gb|AEV34994.1| AlkB, alkylated DNA repair protein [Pseudovibrio sp. FO-BEG1]
Length = 206
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 102/222 (45%), Gaps = 32/222 (14%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--DPQT 295
G L Y ++ EQ +V + L K F G +RM LG L W D
Sbjct: 10 GFKYLPGYFSLEEQKELVETLRYLVKEAPFFTPVMPRTGKPFSVRMTNLGTLGWVSDRNG 69
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y + G IP L+ + +V E ++P+ C+VN
Sbjct: 70 YRYQPQHPESGQPWPKIP--------------EVLLSLWRQVGERE-----VAPEACLVN 110
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVL 415
+Y + ++G+HQDRDE + PVVS S+GD+A F G + + + L SGDV+
Sbjct: 111 YYAATAKMGMHQDRDEKTFKA----PVVSVSLGDAAVFRLGGVKRGGPTQSLKLNSGDVV 166
Query: 416 IFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ GGESR HG+ I S+ +LL++ GRLNLT R+
Sbjct: 167 VLGGESRLCHHGIDRILGGSS--SLLKDG----GRLNLTLRR 202
>gi|121606979|ref|YP_984308.1| 2OG-Fe(II) oxygenase [Polaromonas naphthalenivorans CJ2]
gi|120595948|gb|ABM39387.1| DNA-N1-methyladenine dioxygenase [Polaromonas naphthalenivorans
CJ2]
Length = 217
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGP-GGFYQPGYNDGAKLRLRMM-CLGLDWDP 293
+ PG VLL+ + R + L+ Q + P PG G + + M C L W
Sbjct: 19 IAPGAVLLRGFALDRAEALLQAARQVIAVAPLRHLMTPG---GRVMSVEMSNCGALGWTS 75
Query: 294 QTR--KYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
+Y + + G +P+ F + R+ +EA +PD
Sbjct: 76 SRTGYRYDQADPLSGQPWPPMPACFADMAMRAAAEAG---------------FEGFAPDA 120
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y RL LHQDRDES S P+VS S+G A FL+G + + ++ L
Sbjct: 121 CLINRYEPGARLSLHQDRDESDLSA----PIVSVSLGLPAVFLFGGLQRNERPARLRLAH 176
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV ++GG +R FHGV AP A ++ L R+NLTFR+
Sbjct: 177 GDVAVWGGAARLAFHGV-------APLADGDHPRLGRQRINLTFRR 215
>gi|338532963|ref|YP_004666297.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Myxococcus fulvus
HW-1]
gi|337259059|gb|AEI65219.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Myxococcus fulvus
HW-1]
Length = 217
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 47/237 (19%)
Query: 232 REGILRPGMVLLKHYLTIREQILIVRICQELGKG--------PGGFYQPGYNDGAKLRLR 283
RE L PG +L+ + + L+ R Q++ PGGF ++ +
Sbjct: 15 REEALGPGARVLRGFALAQAGALL-RAVQDVTNASPFRHMETPGGF---------RMSVA 64
Query: 284 MM-CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
M C W D +Y V G +P+ F QL Q + ++
Sbjct: 65 MTSCGAWGWVTDRTGNRYDAVDPVQGRPWPDMPAVFLQLAQTAAAKVG------------ 112
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
+PD C+VN Y ++ LHQD+DE +S P+VS S+G A FL+G
Sbjct: 113 ---FAGFTPDACLVNRYEPGAKMSLHQDKDERDFSA----PIVSVSLGLPAIFLFGGAER 165
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++K E+V L GDV+++GG R +HGV + P +L R+NLTFR+
Sbjct: 166 SDKPERVRLSHGDVVVWGGPDRLRYHGVMPLKAGHHP-------LLGAHRINLTFRK 215
>gi|299065821|emb|CBJ36999.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Ralstonia
solanacearum CMR15]
Length = 218
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 28/174 (16%)
Query: 286 CLGLDWDPQTR--KYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W R +Y ++ G +P+ F +L + + +EA
Sbjct: 69 CGALGWTSDRRGYRYAERDPQTGQPWPPLPNCFLRLARDAAAEAG--------------- 113
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P +PD C++N Y RL LHQD+DE Y P+VS S+G A FL+G R A+K
Sbjct: 114 FPGFTPDACLINRYVPGTRLSLHQDKDEQDYDA----PIVSVSLGMPAVFLWGGHRRADK 169
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++V L GDV+++GG R +HGV + P +L R+NLT R+
Sbjct: 170 TQRVPLFHGDVVVWGGPDRLRYHGVLPLKEAWHP-------LLGAQRINLTLRR 216
>gi|255262538|ref|ZP_05341880.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Thalassiobium sp.
R2A62]
gi|255104873|gb|EET47547.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Thalassiobium sp.
R2A62]
Length = 201
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 64/111 (57%), Gaps = 10/111 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
A P+ C+VN+Y+ R+G+HQDRDE+ ++ PVVS S+GD F G +
Sbjct: 98 ARMPECCLVNWYDPDARMGMHQDRDETDFAQ----PVVSISLGDDGLFRVGSVERGGQTA 153
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ L SGDV + GG++R V HGV I ++ +L N PGR+NLT R
Sbjct: 154 SLWLRSGDVAVMGGDARLVHHGVDRIKAGTS--TILAN----PGRINLTLR 198
>gi|398355714|ref|YP_006401178.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Sinorhizobium
fredii USDA 257]
gi|390131040|gb|AFL54421.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Sinorhizobium
fredii USDA 257]
Length = 203
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY+ R+GLHQDRDE VVS S+GD+ F G +
Sbjct: 102 PEACLVNFYSADARMGLHQDRDERDLETA----VVSISLGDTCLFRVGGRTRGGRTMSFR 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
LESGDV++ GGE R FHGV I PN++ LL+N GR+NLT R+
Sbjct: 158 LESGDVVVLGGEGRLAFHGVDRIYPNTS--TLLKNG----GRVNLTLRR 200
>gi|381403899|ref|ZP_09928583.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pantoea sp. Sc1]
gi|380737098|gb|EIB98161.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pantoea sp. Sc1]
Length = 213
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 28/174 (16%)
Query: 286 CLGLDWDPQTRKYGKKRQ--VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C W +R Y ++Q ++G +P F+ L Q++ EA
Sbjct: 64 CGDFGWSVDSRGYQYEQQDNLNGRRWPPMPPLFRTLAQQAALEAG--------------- 108
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P +PD C++N Y +L LHQD+DE +++ P+VS S+G A F +G +
Sbjct: 109 FPGFNPDACLLNRYEPGAKLTLHQDKDEK--DMRQ--PIVSVSLGLPAVFQFGGFERGDA 164
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++VLLE GD++++GG SR +HG+ + P P ++ R NLTFR+
Sbjct: 165 TQRVLLEHGDIVVWGGPSRLRYHGILPLKPGVHP-------LVGAWRYNLTFRR 211
>gi|306834882|ref|ZP_07467940.1| probable alkylated DNA repair protein [Corynebacterium accolens
ATCC 49726]
gi|304569234|gb|EFM44741.1| probable alkylated DNA repair protein [Corynebacterium accolens
ATCC 49726]
Length = 229
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 22/227 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKG----PGGFYQPGYNDGAKLRLRMMCLGLDW 291
+ PG+ + ++ I +Q +V +E+ + P QP G ++ + + LG W
Sbjct: 13 VAPGVGHVPGWVGIGKQKALVEETREIARAYAHTPMAMVQPRLKSGGQMSVFQLHLGRYW 72
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
Y R VD E + +P L R ++ AL + +E + P++
Sbjct: 73 -----HYPSYRYVDNMEGTRVPPVPDSL--RELAPV-ALRQAAQVAPELEPWVDNFVPEM 124
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLE 410
+VN+Y +G+H D E + PV+S S+GD A F G + K + V L
Sbjct: 125 ALVNYYPPGSAMGMHVDDSE-----ESPAPVISLSIGDEALFRIGHTENRTKPWDDVTLC 179
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGD+++FGG R +HGV +N G L E L+ GR+N+T RQ
Sbjct: 180 SGDLVVFGGPKRFAYHGVVRVN----DGTLPEGCGLQEGRINITIRQ 222
>gi|345300114|ref|YP_004829472.1| 2OG-Fe(II) oxygenase [Enterobacter asburiae LF7a]
gi|345094051|gb|AEN65687.1| 2OG-Fe(II) oxygenase [Enterobacter asburiae LF7a]
Length = 216
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 99/225 (44%), Gaps = 31/225 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG V+L+ + R L I + P F G + + M C L W
Sbjct: 15 LAPGAVILRRFALSRAAALFDGINAVAARSP--FRHMVTPGGYTMSVAMTNCGRLGWTTD 72
Query: 295 TRKY--GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
R Y + G +P F+ L + + + D +PD C
Sbjct: 73 DRGYLYAPLDPITGNPWPAMPDAFQALCHDA-----------AVAAGYAD----FTPDAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
+VN Y +L LHQD+DE L+ P+VS S+G A F +G R + ++++LE G
Sbjct: 118 LVNRYAVGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAVFQFGGLRRNDPLKRLMLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
DV+++GGESR +HG+ + P P A + R NLTFRQ
Sbjct: 174 DVVVWGGESRLYYHGIQPLKPGFHPQA-------QAFRYNLTFRQ 211
>gi|298293784|ref|YP_003695723.1| 2OG-Fe(II) oxygenase [Starkeya novella DSM 506]
gi|296930295|gb|ADH91104.1| 2OG-Fe(II) oxygenase [Starkeya novella DSM 506]
Length = 214
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 10/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
L P+ C++N+Y R+GLHQDRDE ++ PV+S S+GD+A F G +
Sbjct: 102 LQPEACLINWYAPGTRMGLHQDRDEEEFAA----PVLSLSLGDTALFRVGGTSRKDPTRS 157
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ L SGD L+ G +R FHG+ I P+++ LL+ + GR+NLT R+
Sbjct: 158 IRLASGDALLLSGPARLAFHGIDRILPDTS--TLLKQS----GRINLTLRR 202
>gi|359788439|ref|ZP_09291416.1| alkylated DNA repair protein [Mesorhizobium alhagi CCNWXJ12-2]
gi|359255904|gb|EHK58797.1| alkylated DNA repair protein [Mesorhizobium alhagi CCNWXJ12-2]
Length = 209
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY + ++GLHQDRDE L PV+S S+GD F G + +
Sbjct: 106 PEACLVNFYTDAAKMGLHQDRDE----LDLAAPVLSVSLGDDCLFRVGQTSRDGQTKSFR 161
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+++ GGE R FHGV I P ++ LL+N GR+NLT R+
Sbjct: 162 LRSGDLVVLGGEGRLAFHGVDRIYPATS--TLLKNG----GRINLTLRR 204
>gi|431802784|ref|YP_007229687.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas putida
HB3267]
gi|430793549|gb|AGA73744.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas putida
HB3267]
Length = 225
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y RL LHQDRDE + G P+VS S+G A FL+G + +K +++
Sbjct: 125 PDACLVNHYLPGTRLSLHQDRDEQDF----GQPIVSVSLGLPAVFLFGGLQRTDKTQRIP 180
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDVL++GGE R FHGV I P P L R+NLT R+
Sbjct: 181 LSHGDVLVWGGEDRLRFHGVLPIKPGVHP-------RLGERRINLTLRK 222
>gi|260221229|emb|CBA29583.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 217
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 11/113 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
PA PD C++N Y R+ LHQD++E YS P+VS S+G A F G +KA
Sbjct: 114 PAFEPDACLINRYAPGARMTLHQDKNERDYSA----PIVSVSLGLPAVFELGGLERGDKA 169
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++ L+ GDVL++GG +R FHGV ++ P ++ + R NLTFR+
Sbjct: 170 QRLTLQHGDVLVWGGPARLRFHGVRAVEPG-------QHLLTGAHRFNLTFRK 215
>gi|398826512|ref|ZP_10584755.1| alkylated DNA repair protein [Bradyrhizobium sp. YR681]
gi|398221038|gb|EJN07468.1| alkylated DNA repair protein [Bradyrhizobium sp. YR681]
Length = 217
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 65/111 (58%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C+VN Y RL LHQD+DE YS P+VS S+G A FL+G A+K +
Sbjct: 116 FAPDACLVNRYEPGTRLSLHQDKDELDYSA----PIVSVSLGLPATFLFGGMARADKPRR 171
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG SR +HGV AP A E+ +L R+NLTFR+
Sbjct: 172 FRLVHGDVVVWGGASRLAYHGV-------APLAEGEHALLGRKRINLTFRR 215
>gi|299533827|ref|ZP_07047198.1| 2OG-Fe(II) oxygenase [Comamonas testosteroni S44]
gi|298718243|gb|EFI59229.1| 2OG-Fe(II) oxygenase [Comamonas testosteroni S44]
Length = 224
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P +PD C++N Y R+GLH+D+DE ++ P+VS S+G FL+G +
Sbjct: 111 PGFAPDACLINRYQPGARMGLHRDQDEHDFAA----PIVSVSLGLPCRFLWGGLTRQSPT 166
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
++ L GDVL++GG SR VFHGV+ + P LL+N R NLTFR
Sbjct: 167 RRLALTHGDVLVWGGPSRLVFHGVAPLREGQHP--LLDNE-----RWNLTFR 211
>gi|354724465|ref|ZP_09038680.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter mori
LMG 25706]
Length = 216
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 99/227 (43%), Gaps = 35/227 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG V+L+ + R L+ I + P F G + + M C L W
Sbjct: 15 LAPGAVILRRFALSRAAALLTGIDEVAAVSP--FRHMVTPGGYTMSVAMTNCGQLGWATN 72
Query: 295 TRKY--GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
R Y G +P F++L + + + D PD C
Sbjct: 73 ERGYLYAPNDPTTGKPWPPMPDAFQRLCHEA-----------AVAAGYAD----FQPDAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y +L LHQD+DE L+ P+VS S+G A F +G R + ++++LE G
Sbjct: 118 LINRYAVGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAVFQFGGLRRNDPLKRLMLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFRQ 457
DV+++GGESR +HG+ + P P GA R NLTFRQ
Sbjct: 174 DVVVWGGESRLFYHGIQPLKPGVHPQTGAF---------RFNLTFRQ 211
>gi|424897651|ref|ZP_18321225.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393181878|gb|EJC81917.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 205
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C++NFY+ R+GLHQD+DE + PVVS S+G+S F G ++
Sbjct: 102 PEACLINFYSDDARMGLHQDKDERDFQA----PVVSISLGNSCLFRIGGLSRKDRTLSFK 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGDV++ GGE R FHGV I+P ++ LL+N GR+NLT R+
Sbjct: 158 LSSGDVVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|402820034|ref|ZP_10869601.1| alkylated DNA repair protein [alpha proteobacterium IMCC14465]
gi|402510777|gb|EJW21039.1| alkylated DNA repair protein [alpha proteobacterium IMCC14465]
Length = 206
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 7/109 (6%)
Query: 350 DICIVNFYNTS-GRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
+ C++N Y S ++GLHQDRDE + K PV+SFS+GDSA F G + + V
Sbjct: 100 ECCLINLYQGSRAKMGLHQDRDE----IDKNFPVLSFSLGDSARFRVGGKTRKGPTQSVK 155
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGDV++ GESR FHG+ I P S+ L+ + + GR+NLT R+
Sbjct: 156 LNSGDVVVLQGESRLGFHGIDRIMPESS--TLIGDYIEGGGRVNLTLRR 202
>gi|421852610|ref|ZP_16285296.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371479114|dbj|GAB30499.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 222
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 84/185 (45%), Gaps = 33/185 (17%)
Query: 277 GAKLRLRMMCLG-LDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKM 333
G ++ + M C G W Q Y K G +P+ F+ L ++ +A
Sbjct: 62 GGQMSVAMTCCGTFGWISTAQGYSYTKVNPFTGQPWPDMPAIFQALAHKAAQKAG----- 116
Query: 334 DSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEF 393
P+ C++N Y+ R+GLHQDRDE PVVS S G A F
Sbjct: 117 ----------FAQFQPNTCLINSYSPGARMGLHQDRDEG----CTDQPVVSLSFGLEATF 162
Query: 394 LYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG--RL 451
L+G + ++ ++LL+ GDVL++GG R FHGV I+ +R G RL
Sbjct: 163 LWGGLKRSDPTRQILLKDGDVLVWGGPDRLRFHGVKPIH---------SGAHIRTGETRL 213
Query: 452 NLTFR 456
N+TFR
Sbjct: 214 NITFR 218
>gi|339487771|ref|YP_004702299.1| 2OG-Fe(II) oxygenase [Pseudomonas putida S16]
gi|338838614|gb|AEJ13419.1| 2OG-Fe(II) oxygenase [Pseudomonas putida S16]
Length = 215
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y RL LHQDRDE + G P+VS S+G A FL+G + +K +++
Sbjct: 115 PDACLVNHYLPGTRLSLHQDRDEQDF----GQPIVSVSLGLPAVFLFGGLQRTDKTQRIP 170
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDVL++GGE R FHGV I P P L R+NLT R+
Sbjct: 171 LSHGDVLVWGGEDRLRFHGVLPIKPGVHP-------RLGERRINLTLRK 212
>gi|161170285|gb|ABX59255.1| alkylation damage repair protein AlkB [uncultured marine bacterium
EB000_55B11]
gi|297183813|gb|ADI19936.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
Length = 205
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 30/219 (13%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDWDPQTRK 297
G + K L I EQ ++ +E+ K P G K+ ++M G W
Sbjct: 13 GFKIFKDKLNIDEQNKLISDLREIAK-DAPLSSPLVPGGNKMSVKMTSAGKYGWFSDGEG 71
Query: 298 YGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFY 357
Y R +D C+P+ + + Q+ +++ + K ++E I PD C++N+Y
Sbjct: 72 Y---RYID-CQPN--GNNWPQI-------PGSILNIWKKFVSIERI-----PDCCLINYY 113
Query: 358 NTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIF 417
+ + ++GLHQD DE+ ++ PV+S S+GD A F G+ + K + L SGD+++
Sbjct: 114 SENAKMGLHQDNDEADFNW----PVLSISLGDDALFRIGNNKKGGKTDSFWLNSGDIVLM 169
Query: 418 GGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GG++R HGV I ++ LL+N GR+NLT R
Sbjct: 170 GGDARLKHHGVDRIRFGTS--RLLKNG----GRINLTLR 202
>gi|405355777|ref|ZP_11024889.1| Alkylated DNA repair protein AlkB [Chondromyces apiculatus DSM 436]
gi|397091049|gb|EJJ21876.1| Alkylated DNA repair protein AlkB [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 217
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 26/147 (17%)
Query: 311 VIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRD 370
+P F QL Q + + A D +P D C+VN Y+T ++ LHQD+D
Sbjct: 95 TMPMAFLQLAQSAAARA-----------GFADFVP----DSCLVNRYDTGAKMSLHQDKD 139
Query: 371 ESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSS 430
E +S P+VS S+G A FL+G E A+K +V L GDV+++GG +R +HGV
Sbjct: 140 ERDFSA----PIVSVSLGLPAVFLFGGEGRADKPLRVRLIHGDVVVWGGPARLRYHGVMP 195
Query: 431 INPNSAPGALLENTMLRPGRLNLTFRQ 457
+ P P L R+NLTFR+
Sbjct: 196 LKPGHHP-------QLGAHRINLTFRK 215
>gi|430807978|ref|ZP_19435093.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cupriavidus sp.
HMR-1]
gi|429499701|gb|EKZ98109.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cupriavidus sp.
HMR-1]
Length = 220
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 67/113 (59%), Gaps = 11/113 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P +PD C++N Y RL LHQDRDE L P+VS S+G A FL+G R A++
Sbjct: 117 PGFAPDACLINRYLPGTRLSLHQDRDE----LDLRAPIVSVSLGLPAVFLWGGLRRADRP 172
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++ L GDV+++GG SR VFHG+ AP A ++ + R+NLTFR+
Sbjct: 173 DRFRLAHGDVVVWGGPSRLVFHGI-------APLADGDHALTGSERINLTFRK 218
>gi|329114059|ref|ZP_08242823.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Acetobacter pomorum
DM001]
gi|326696598|gb|EGE48275.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Acetobacter pomorum
DM001]
Length = 239
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 86/192 (44%), Gaps = 36/192 (18%)
Query: 270 YQPGYNDGAKLRLRMMCLG-LDWDPQTRKYGKKR--QVDGCEPSVIPSEFKQLVQRSMSE 326
Y PG G ++ + M C G W ++ Y R G +P+ F+ L ++ +
Sbjct: 75 YTPG---GGQMSVAMTCCGTFGWVSTSQGYSYTRVNPFTGQPWPNMPTIFQTLAHKAAQK 131
Query: 327 AHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFS 386
A P+ C++N Y+ R+GLHQDRDE PVVS S
Sbjct: 132 AG---------------FAQFQPNACLINSYSPGARMGLHQDRDEGCTEQ----PVVSLS 172
Query: 387 VGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTML 446
G A FL+G + ++ ++LL GDVL++GG R FHG+ I T
Sbjct: 173 FGLEAVFLWGGLKRSDPTRQILLRDGDVLVWGGPDRLRFHGIKPIR---------AGTHA 223
Query: 447 RPG--RLNLTFR 456
R G RLN+TFR
Sbjct: 224 RTGETRLNITFR 235
>gi|307129703|ref|YP_003881719.1| alkylated DNA repair protein alkB [Dickeya dadantii 3937]
gi|306527232|gb|ADM97162.1| Alkylated DNA repair protein AlkB [Dickeya dadantii 3937]
Length = 217
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 29/229 (12%)
Query: 232 REGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLD 290
R L PG +LL+ + + L+ + Q + P F G + + M C L
Sbjct: 14 RNDTLAPGAMLLRGFAWQQAGELLAALEQVTQRSP--FRHMVTPGGHTMSVAMSNCGPLG 71
Query: 291 W--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALS 348
W D +Y + + G +P+ F QL Q + EA +
Sbjct: 72 WVSDELGYRYSAQDPLTGQPWPAMPACFWQLAQAAAREAG---------------YDGFA 116
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y +L LHQD+DE L++ P+VS S+G SA FL+G + ++ +++
Sbjct: 117 PDACLINRYAVGAKLSLHQDKDEQ--DLRQ--PIVSVSLGLSAVFLFGGAKRSDPCQRLA 172
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG SR +H + + P + + R+NLTFR+
Sbjct: 173 LMHGDVVVWGGPSRLYYHAILPLKNGPLPAGMSDEV-----RVNLTFRK 216
>gi|162146641|ref|YP_001601100.1| alkylated DNA repair protein alkB [Gluconacetobacter diazotrophicus
PAl 5]
gi|209543367|ref|YP_002275596.1| 2OG-Fe(II) oxygenase [Gluconacetobacter diazotrophicus PAl 5]
gi|161785216|emb|CAP54762.1| putative alkylated DNA repair protein alkB [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531044|gb|ACI50981.1| 2OG-Fe(II) oxygenase [Gluconacetobacter diazotrophicus PAl 5]
Length = 225
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 99/229 (43%), Gaps = 31/229 (13%)
Query: 232 REGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLD 290
R+ +L PG ++L + LI + P F + G + + M C
Sbjct: 23 RDRVLGPGAMVLAGFARAIAPDLIAMVDMVARTAP--FRRMSTPSGRTMSVAMTNCGTAG 80
Query: 291 W--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALS 348
W D + +Y + G +P+ F L R+ S A
Sbjct: 81 WVSDTKGYRYDPMDPLSGHPWPALPALFADLAARAASRAG---------------FSEFH 125
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y RL LHQDRDE +S P+VS S+G A FL+G +++ +V
Sbjct: 126 PDACLINRYEPGTRLTLHQDRDEHDFSQ----PIVSVSLGLPAIFLWGGPARSDRVRRVP 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
LE GDV+++GG +R V HG+ + P + RLNLTFR+
Sbjct: 182 LEHGDVVVWGGPARLVHHGIHPLTEGMHP-------LTGRARLNLTFRR 223
>gi|229590437|ref|YP_002872556.1| alkylated DNA repair protein [Pseudomonas fluorescens SBW25]
gi|229362303|emb|CAY49205.1| alkylated DNA repair protein [Pseudomonas fluorescens SBW25]
Length = 221
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 64/110 (58%), Gaps = 11/110 (10%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y ++ LHQD++E RYS PVVS S+G A FL+G + KA+K
Sbjct: 120 FAPDACLINRYVPGAKMSLHQDKNERRYSE----PVVSVSLGLPAIFLFGGHERSAKAQK 175
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
V L GDV+++GG R FHGV I P ++ P R+NLTFR
Sbjct: 176 VSLFHGDVVVWGGVDRLRFHGVMPIKDGVHP-------VMGPQRINLTFR 218
>gi|258543248|ref|YP_003188681.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-01]
gi|384043168|ref|YP_005481912.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-12]
gi|384051685|ref|YP_005478748.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-03]
gi|384054792|ref|YP_005487886.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-07]
gi|384058027|ref|YP_005490694.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-22]
gi|384060668|ref|YP_005499796.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-26]
gi|384063960|ref|YP_005484602.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-32]
gi|384119971|ref|YP_005502595.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256634326|dbj|BAI00302.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-01]
gi|256637384|dbj|BAI03353.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-03]
gi|256640436|dbj|BAI06398.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-07]
gi|256643493|dbj|BAI09448.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-22]
gi|256646548|dbj|BAI12496.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-26]
gi|256649601|dbj|BAI15542.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-32]
gi|256652589|dbj|BAI18523.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655645|dbj|BAI21572.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus IFO
3283-12]
Length = 222
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 84/185 (45%), Gaps = 33/185 (17%)
Query: 277 GAKLRLRMMCLG-LDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKM 333
G ++ + M C G W Q Y K G +P+ F+ L ++ +A
Sbjct: 62 GGQMSVAMTCCGTFGWISTAQGYSYTKVNPFTGQPWPDMPAIFQALAHKAAQKAG----- 116
Query: 334 DSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEF 393
P+ C++N Y+ R+GLHQDRDE PVVS S G A F
Sbjct: 117 ----------FAQFQPNACLINSYSPGARMGLHQDRDEGCTDQ----PVVSLSFGLEATF 162
Query: 394 LYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG--RL 451
L+G + ++ ++LL+ GDVL++GG R FHGV I+ +R G RL
Sbjct: 163 LWGGLKRSDPTRQILLKDGDVLVWGGPDRLRFHGVKPIH---------SGAHIRTGETRL 213
Query: 452 NLTFR 456
N+TFR
Sbjct: 214 NITFR 218
>gi|167033553|ref|YP_001668784.1| 2OG-Fe(II) oxygenase [Pseudomonas putida GB-1]
gi|166860041|gb|ABY98448.1| 2OG-Fe(II) oxygenase [Pseudomonas putida GB-1]
Length = 219
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 63/109 (57%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y RL LHQDRDE + G P+VS S+G A FL+G + A+K +++
Sbjct: 119 PDACLVNHYLPGTRLSLHQDRDEQDF----GQPIVSVSLGLPAVFLFGGLQRADKTQRIP 174
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDVL++GG R FHGV I P + P L R+NLT R+
Sbjct: 175 LSHGDVLVWGGIDRLRFHGVLPIKPGTHP-------RLGERRINLTLRK 216
>gi|170721657|ref|YP_001749345.1| 2OG-Fe(II) oxygenase [Pseudomonas putida W619]
gi|169759660|gb|ACA72976.1| 2OG-Fe(II) oxygenase [Pseudomonas putida W619]
Length = 214
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 64/114 (56%), Gaps = 15/114 (13%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
A PD C+VN Y RL LHQDRDE+ + G P+VS S+G A FL G + ++K
Sbjct: 112 AFVPDACLVNHYLPGTRLSLHQDRDEADF----GQPIVSVSLGLPAVFLLGGFQRSDKTR 167
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG--RLNLTFRQ 457
++ L GDVL++GGE R FHGV I P P R G R+NLT R+
Sbjct: 168 RIALSHGDVLVWGGEDRLRFHGVLPIKPGVHP---------RMGERRINLTLRK 212
>gi|398847667|ref|ZP_10604562.1| alkylated DNA repair protein [Pseudomonas sp. GM84]
gi|398251348|gb|EJN36610.1| alkylated DNA repair protein [Pseudomonas sp. GM84]
Length = 214
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 64/111 (57%), Gaps = 15/111 (13%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y RL LHQDRDE+ + G P+VS S+G A FL G + A++ ++V
Sbjct: 115 PDACLVNHYLPGTRLSLHQDRDEADF----GQPIVSVSLGLPAVFLLGGLQRADRTQRVP 170
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG--RLNLTFRQ 457
L GDVL++GGE R FHGV + P P R G R+NLT R+
Sbjct: 171 LSHGDVLVWGGEDRLRFHGVLPVKPGVHP---------RMGERRINLTLRK 212
>gi|395647390|ref|ZP_10435240.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 221
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 11/109 (10%)
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
SPD C++N Y ++ LHQD++E RYS PVVS S+G A FL+G ++K +KV
Sbjct: 121 SPDACLINRYIPGAKMSLHQDKNERRYSE----PVVSVSLGLPAIFLFGGHERSDKPQKV 176
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L GDV+++GG R FHGV I P ++ P R+NLTFR
Sbjct: 177 SLFHGDVVVWGGVDRLRFHGVMPIKDGMHP-------IMGPQRINLTFR 218
>gi|241206982|ref|YP_002978078.1| 2OG-Fe(II) oxygenase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860872|gb|ACS58539.1| 2OG-Fe(II) oxygenase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 192
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY+ R+GLHQD+DE + PVVS S+G+S F G ++
Sbjct: 91 PEACLVNFYSDEARMGLHQDKDEQDFKA----PVVSISLGNSCLFRVGGLSHNDRTLSFK 146
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+++ GGE R FHGV I+P ++ LL+N GR+NLT R+
Sbjct: 147 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 189
>gi|387129212|ref|YP_006292102.1| Alkylated DNA repair protein AlkB [Methylophaga sp. JAM7]
gi|386270501|gb|AFJ01415.1| Alkylated DNA repair protein AlkB [Methylophaga sp. JAM7]
Length = 196
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD+C++N Y ++GLHQDRDE ++ P+VS S+G A+F +G + +++L
Sbjct: 97 PDVCLINVYQPGDKMGLHQDRDEQDFTQ----PIVSVSLGLPAKFQFGGTARNDAKQQIL 152
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDVL++GG R FHGV + P +L R+NLTFRQ
Sbjct: 153 LSHGDVLVWGGAKRLNFHGVLPLKDGHHP-------LLGRKRINLTFRQ 194
>gi|126724642|ref|ZP_01740485.1| alkylated DNA repair protein, putative [Rhodobacterales bacterium
HTCC2150]
gi|126705806|gb|EBA04896.1| alkylated DNA repair protein, putative [Rhodobacteraceae bacterium
HTCC2150]
Length = 209
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 39/211 (18%)
Query: 251 EQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--DPQTRKYGKKRQVDGC 307
+Q ++ + + + K P ++P G + ++M G W D Q +Y K
Sbjct: 30 QQGILADLRKVIAKAP--MFRPMTPMGKPMSVQMSSAGTYGWYTDKQGYRYATKHPNGTK 87
Query: 308 EPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
P + PS ++ + +VS V P+ C++NFY ++G+HQ
Sbjct: 88 WPPIPPS---------------ILSIWDRVSGVSK-----QPECCLINFYGQEAKMGMHQ 127
Query: 368 DRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHG 427
D+DE+ + PVVS S+GD A F G E K + L SGDV++ GG++R HG
Sbjct: 128 DKDEADFRW----PVVSISLGDDARFRIGHENRGGKTQTATLRSGDVMVMGGDARLKHHG 183
Query: 428 VSSINPNSAPGALLENTMLRP--GRLNLTFR 456
V I+ ++L P GR+NLT R
Sbjct: 184 VDRID--------FGTSLLLPKGGRINLTLR 206
>gi|187929908|ref|YP_001900395.1| 2OG-Fe(II) oxygenase [Ralstonia pickettii 12J]
gi|187726798|gb|ACD27963.1| 2OG-Fe(II) oxygenase [Ralstonia pickettii 12J]
Length = 218
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y R+ LHQD+DE Y G P+VS S+G A FL+G R A++ ++
Sbjct: 117 FTPDACLINRYVPGARMSLHQDKDEQDY----GAPIVSVSLGMPAVFLFGGHRRADRPQR 172
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ L GDV+++GG R +HG++ + + + ML R+NLTFR+
Sbjct: 173 IPLFHGDVVVWGGPDRLRYHGIAPLKDH-------PHAMLGSQRINLTFRK 216
>gi|401675707|ref|ZP_10807696.1| DNA-N1-methyladenine dioxygenase [Enterobacter sp. SST3]
gi|400217090|gb|EJO47987.1| DNA-N1-methyladenine dioxygenase [Enterobacter sp. SST3]
Length = 218
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 97/225 (43%), Gaps = 31/225 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG V+L+ + R + L+ I + P F G + + M C L W
Sbjct: 15 LAPGAVILRRFALSRAEALLAGIEEVTAASP--FRHMVTPGGYTMSVAMTNCGELGWATN 72
Query: 295 TRKY--GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
R Y G +P+ F+ L + A P PD C
Sbjct: 73 ERGYVYAPNDLTTGRPWPPMPAVFQALCHEAAVAAD---------------YPDFRPDAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y +L LHQD+DE L+ P+VS S+G A F +G R + ++++LE G
Sbjct: 118 LINRYAVGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAVFQFGGLRRNDPLKRIMLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
DV+++G ESR +HG+ + P P + R NLTFRQ
Sbjct: 174 DVVVWGRESRLYYHGIQPLKPGVHP-------LTGEYRFNLTFRQ 211
>gi|317048896|ref|YP_004116544.1| 2OG-Fe(II) oxygenase [Pantoea sp. At-9b]
gi|316950513|gb|ADU69988.1| 2OG-Fe(II) oxygenase [Pantoea sp. At-9b]
Length = 213
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 103/227 (45%), Gaps = 35/227 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L G V+L+ + L+ I + P F G ++ + M C L W
Sbjct: 15 LAEGAVILRRRAREQADALLAEIYAIAAQNP--FAHRITPGGHRMSVAMTNCGDLGWSSD 72
Query: 295 TRKYGKKRQVD--GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
+R Y Q + G + +P+ F+ L Q++ EA +PD C
Sbjct: 73 SRGYQYTEQDNHSGHKWPPMPTLFRALAQQTAQEAG---------------FSGFNPDAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y +L LHQD+DE L++ P+VS S+G A F +G + ++VLLE G
Sbjct: 118 LINRYEPGAKLTLHQDKDEK--DLRQ--PIVSVSLGLPAVFQFGGFERGDATQRVLLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFRQ 457
D++++GG SR +HG+ + P P GA R NLTFR+
Sbjct: 174 DIVVWGGPSRLRYHGILPLKPGIHPEAGAF---------RYNLTFRR 211
>gi|405376958|ref|ZP_11030907.1| alkylated DNA repair protein [Rhizobium sp. CF142]
gi|397326511|gb|EJJ30827.1| alkylated DNA repair protein [Rhizobium sp. CF142]
Length = 203
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY+ R+GLHQD+DE+ + PVVS S+G++ F G +K
Sbjct: 102 PEACLVNFYSDEARMGLHQDKDEN----DRKAPVVSISLGNACLFRVGGLNRNDKTMSFK 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD++I GGE R FHGV I P A LL+N GR+NLT R+
Sbjct: 158 LSSGDLVILGGEGRLFFHGVDRIYP--ATSTLLKNG----GRINLTLRR 200
>gi|255325789|ref|ZP_05366883.1| alkylated DNA repair protein [Corynebacterium tuberculostearicum
SK141]
gi|255297200|gb|EET76523.1| alkylated DNA repair protein [Corynebacterium tuberculostearicum
SK141]
Length = 229
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDW 291
+ PG+ + ++ + +Q +V I +E P +P G ++ + + LG W
Sbjct: 13 VAPGVGHVPEWVGVEKQKALVEEMRGIAREYAGTPMAMVRPRLKSGGQMSVFQLHLGRYW 72
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSM-SEAHALIKMDSKVSNVEDILPALSPD 350
+ +Y +DG +P +Q+ ++ + A +++ V N P+
Sbjct: 73 HYPSYRY--VDNMDGTRVPPVPESLRQIAPGALRAAAEVAPELEPWVEN-------FVPE 123
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYG-DERDANKAEKVLL 409
+ +VN+Y +G+H D E + PV+S S+GD A F G E + + L
Sbjct: 124 MALVNYYPPGSAMGMHVDDSE-----ESPAPVISLSIGDEALFRMGHTESRTRPWDDITL 178
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGD+++FGG R +HGV +N G L E L GR+N+T RQ
Sbjct: 179 CSGDLVVFGGPKRFAYHGVVRVN----DGTLPEGCGLSEGRINITIRQ 222
>gi|99079852|ref|YP_612006.1| DNA-N1-methyladenine dioxygenase [Ruegeria sp. TM1040]
gi|99036132|gb|ABF62744.1| DNA-N1-methyladenine dioxygenase [Ruegeria sp. TM1040]
Length = 200
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 36/222 (16%)
Query: 239 GMVLLKHYLTIREQI-LIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--DPQ 294
G + K +L+++ Q LI + L P + P G ++ +RM G W DP
Sbjct: 8 GFEIHKGFLSVQAQKELISALRPVLRAAP--LFSPEVPGGGQMSVRMTSAGEYGWFSDPS 65
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + + G + IPSE ++ + + + + E + PD C+
Sbjct: 66 GYRY-EGKHPSGRKWPEIPSE--------------VLNVWTTLVDRERL-----PDCCLF 105
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
N+Y R+GLHQD+DE+ +S PVVS S+GD G K + V L SGDV
Sbjct: 106 NYYGEGARMGLHQDKDEADFSF----PVVSISLGDDGLLRLGGTSRKEKTQTVWLNSGDV 161
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
++ GGE+R +HG+ I S+ + + GR+NLT R
Sbjct: 162 VVMGGEARLAYHGIDRIRFRSS------RLLPKGGRVNLTLR 197
>gi|311108476|ref|YP_003981329.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Achromobacter
xylosoxidans A8]
gi|310763165|gb|ADP18614.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Achromobacter
xylosoxidans A8]
Length = 219
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 81/174 (46%), Gaps = 28/174 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D + +Y + + G +P F +L Q + +EA
Sbjct: 70 CGQLGWTSDARGYRYARIDPLSGQPWPAMPEAFLRLAQTAAAEAG--------------- 114
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C+VN Y RL LHQD++E Y G P+VS S+G A FL+G ++ +K
Sbjct: 115 FPGFEPDACLVNRYEPGSRLSLHQDKNERDY----GAPIVSVSLGMPAMFLFGGDQRTDK 170
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
A + L GDV+++GG R +HG+ I L + L R+N T R+
Sbjct: 171 ASRTPLFHGDVVVWGGVDRLRYHGIMPIKD-------LPHPRLGSQRINFTIRR 217
>gi|347761660|ref|YP_004869221.1| DNA repair protein for alkylated DNA [Gluconacetobacter xylinus
NBRC 3288]
gi|347580630|dbj|BAK84851.1| DNA repair protein for alkylated DNA [Gluconacetobacter xylinus
NBRC 3288]
Length = 227
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 12/109 (11%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD+C++N Y R+GLHQDRDE + PVVS S G A FL+G + + ++
Sbjct: 128 PDVCLINGYRPGARMGLHQDRDE-----RLDAPVVSLSFGLPALFLWGGLKRTDACRRIP 182
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG SR VFH ++ + E+ + P R NLTFR+
Sbjct: 183 LLHGDVVVWGGPSRLVFHAIAPLRAG-------EHPVTGPCRYNLTFRR 224
>gi|398380806|ref|ZP_10538920.1| alkylated DNA repair protein [Rhizobium sp. AP16]
gi|397720237|gb|EJK80795.1| alkylated DNA repair protein [Rhizobium sp. AP16]
Length = 202
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 38/214 (17%)
Query: 250 REQILIVRICQELGKGPGGFYQPGY-NDGAKLRLRMM-CLGLDW--DPQ-TRKYGKKRQV 304
+++ L+ I + + P Y P G ++ +RM C L W D Q +Y V
Sbjct: 18 QQEALVEAIRNVVAEAP--LYTPAMPGTGKEMSVRMTNCGSLGWVTDKQHGYRYQPTHPV 75
Query: 305 DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLG 364
G IP + L+++ + ++ E P+ C+VNFYN R+G
Sbjct: 76 TGRPWPAIPPQ--------------LLELWANIAGYEK-----PPEACLVNFYNDDARMG 116
Query: 365 LHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHV 424
LHQDRDE + PV+S S+G++ F G ++ L SGD+++ GGE R
Sbjct: 117 LHQDRDEQDLAA----PVLSISLGNTCLFRVGGLNRNDRTLSFKLSSGDIVVLGGEGRLC 172
Query: 425 FHGVSSINPNSAPGALLENTMLRP-GRLNLTFRQ 457
FHGV I+P ++ T+L+ GR+NLT R+
Sbjct: 173 FHGVDRIHPATS-------TLLKSGGRINLTLRR 199
>gi|222084240|ref|YP_002542766.1| alkylated DNA repair protein AlkB [Agrobacterium radiobacter K84]
gi|221721688|gb|ACM24844.1| alkylated DNA repair protein AlkB [Agrobacterium radiobacter K84]
Length = 181
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 12/110 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFYN R+GLHQDRDE + PV+S S+G++ F G ++
Sbjct: 80 PEACLVNFYNDDARMGLHQDRDEQDLAA----PVLSISLGNTCLFRVGGLNRNDRTLSFK 135
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP-GRLNLTFRQ 457
L SGD+++ GGE R FHGV I+P ++ T+L+ GR+NLT R+
Sbjct: 136 LSSGDIVVLGGEGRLCFHGVDRIHPATS-------TLLKSGGRINLTLRR 178
>gi|313201954|ref|YP_004040612.1| 2og-fe(ii) oxygenase [Methylovorus sp. MP688]
gi|312441270|gb|ADQ85376.1| 2OG-Fe(II) oxygenase [Methylovorus sp. MP688]
Length = 212
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y R+ LHQD++E YS P+VS S+G SA F G + + KA ++
Sbjct: 113 PDACLINRYAPGTRMSLHQDKNEVDYSA----PIVSVSLGVSAVFQLGGMQRSEKASRIS 168
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+ GDVL++GGE R FHGV I P P + R+NLTFR+
Sbjct: 169 LQHGDVLVWGGEDRLRFHGVLPIKPQQHP-------LTGEDRINLTFRK 210
>gi|423115335|ref|ZP_17103026.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5245]
gi|376381421|gb|EHS94158.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5245]
Length = 216
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 103/236 (43%), Gaps = 39/236 (16%)
Query: 227 TVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM- 285
T W + L PG ++L+ Y R L+ I + P F Q G + + M
Sbjct: 8 TPPWQEQ--LAPGAIILRRYARERAPALLQAITDIAHRSP--FRQMVTPGGYTMSVAMTN 63
Query: 286 CLGLDWDPQTRKY--GKKRQVDGCEPSVIPSEFKQLVQRSMSE---AHALIKMDSKVSNV 340
C L W R Y + G +P+ F++L + + AH
Sbjct: 64 CGELGWTTNARGYLYASDDPLTGKRWPQMPTLFRELASEAAAAGGYAH------------ 111
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
+PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R
Sbjct: 112 ------FTPDACLINRYQPGTKLSLHQDKDER--DLRA--PIVSVSLGLPAIFQFGGLRR 161
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
++ ++VLLE GDV+++GGESR +HG+ + P R NLTFR
Sbjct: 162 SDPLQRVLLEHGDVVVWGGESRLFYHGIQPLKEGVHPDT-------GSCRYNLTFR 210
>gi|349686632|ref|ZP_08897774.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Gluconacetobacter
oboediens 174Bp2]
Length = 217
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 12/109 (11%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD+C++N Y R+GLHQDRDE + PVVS S G A F +G R + +V
Sbjct: 119 PDVCLINGYRPGARMGLHQDRDE-----RLDAPVVSVSFGLPAIFQWGGLRRTDPLRRVP 173
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG SR VFHGV+ + ++ + P R NLTFR+
Sbjct: 174 LRHGDVVVWGGPSRLVFHGVAVLRAG-------DHAVTGPCRYNLTFRR 215
>gi|264676316|ref|YP_003276222.1| 2OG-Fe(II) oxygenase [Comamonas testosteroni CNB-2]
gi|262206828|gb|ACY30926.1| 2OG-Fe(II) oxygenase [Comamonas testosteroni CNB-2]
Length = 224
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 11/112 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P +PD C++N Y R+GLH+D+DE ++ P+VS S+G FL+G +
Sbjct: 111 PGFAPDACLINRYQPGARMGLHRDQDEHDFAA----PIVSVSLGLPCRFLWGGLTRQSPT 166
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
++ L GDVL++GG SR VFHGV+ + P LL N R NLTFR
Sbjct: 167 RRLALTHGDVLVWGGPSRLVFHGVAPLREGQHP--LLGNE-----RWNLTFR 211
>gi|39934792|ref|NP_947068.1| alkylated DNA repair protein [Rhodopseudomonas palustris CGA009]
gi|39648642|emb|CAE27163.1| alkylated DNA repair protein [Rhodopseudomonas palustris CGA009]
Length = 216
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 102/232 (43%), Gaps = 31/232 (13%)
Query: 229 DWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CL 287
D R + PG LL + E+ L+ I + + P F G + + M C
Sbjct: 11 DAPRRQDIAPGAALLSGFARANERELLAAIDAVVARAP--FRHMMTPGGHTMSVAMTSCG 68
Query: 288 GLDWDPQTRKYG-KKRQVDGCEP-SVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILP 345
+ W R Y D P +P+ + L QR+ ++
Sbjct: 69 SVGWVTDRRGYRYSPNDPDSATPWPKMPAVLRDLAQRAAADVG---------------FA 113
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
PD C++N Y ++ LHQD+DE+ +S P+VS S+G A F +G ++K
Sbjct: 114 GFDPDACLINRYVPGAKMALHQDKDEADFSA----PIVSVSLGLPAIFQFGGMARSDKPR 169
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ L GDVL++GG SR V+HGV ++ E+ +L R+NLTFR+
Sbjct: 170 RYELRHGDVLVWGGPSRLVYHGVLTLKDG-------EHPLLGRQRINLTFRK 214
>gi|334124893|ref|ZP_08498888.1| alkylated DNA repair protein [Enterobacter hormaechei ATCC 49162]
gi|333387964|gb|EGK59155.1| alkylated DNA repair protein [Enterobacter hormaechei ATCC 49162]
Length = 213
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 18/136 (13%)
Query: 324 MSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVV 383
M EA + D+ V+ P PD C++N Y +L LHQD+DE L+ P+V
Sbjct: 92 MPEAFQALCHDAAVAAG---YPDFRPDACLINRYAVGAKLSLHQDKDEP--DLRA--PIV 144
Query: 384 SFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP--GALL 441
S S+G A F +G R + ++++LE GDV+++GGESR +HG+ + P P GA
Sbjct: 145 SVSLGLPAVFQFGGLRRNDPLKRLMLEHGDVVVWGGESRLFYHGIQPLKPGDHPVAGAF- 203
Query: 442 ENTMLRPGRLNLTFRQ 457
R NLTFRQ
Sbjct: 204 --------RYNLTFRQ 211
>gi|254470945|ref|ZP_05084348.1| alkylated DNA repair protein [Pseudovibrio sp. JE062]
gi|211960087|gb|EEA95284.1| alkylated DNA repair protein [Pseudovibrio sp. JE062]
Length = 206
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 100/222 (45%), Gaps = 32/222 (14%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--DPQT 295
G L Y ++ EQ +V + L K F G +RM LG L W D
Sbjct: 10 GFKYLPGYFSLEEQKELVETLRYLVKEAPLFTPVMPRTGKPFSVRMTNLGSLGWVSDRNG 69
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y + G IP L+ + +V E +P+ C+VN
Sbjct: 70 YRYQPQHPESGQPWPEIP--------------EVLLSLWKQVGECEA-----APEACLVN 110
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVL 415
+Y + ++G+HQDRDE + PVVS S+GD+A F G + + + L SGDV+
Sbjct: 111 YYAATAKMGMHQDRDEKTFEA----PVVSVSLGDTAVFRLGSVKRGGPTQSLKLSSGDVV 166
Query: 416 IFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ GG SR HG+ I S+ +LL++ GRLNLT R+
Sbjct: 167 VLGGASRLCHHGIDRILGGSS--SLLKDG----GRLNLTLRR 202
>gi|452912036|ref|ZP_21960694.1| Alkylated DNA repair protein AlkB [Kocuria palustris PEL]
gi|452832806|gb|EME35629.1| Alkylated DNA repair protein AlkB [Kocuria palustris PEL]
Length = 289
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 46/248 (18%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWD----- 292
PG V + +L+ +EQ +V C+ +G + G + ++ LG W+
Sbjct: 30 PGAVHVPDWLSTQEQAELVAQCRGWSRGDHRMRHYTTSTGGVMSVQSTVLGRTWELPWAP 89
Query: 293 ----------------PQTRKYGKKRQVDGCEP-------SVIPSEFKQLVQRSMSEAHA 329
P+ ++ +G P +P L +R ++ A+
Sbjct: 90 TISSPERGAAAGEPKSPRPASGDRRAAAEGSTPDDEAAVGQRLPEALWHLGRRGVAAAYG 149
Query: 330 LIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGD 389
+ + S+ E P +VN+Y+ S R+G HQD DE+ P+VS S+GD
Sbjct: 150 --EEAPEASSFE-------PTTALVNYYDASARMGQHQDLDEAGPE-----PIVSLSLGD 195
Query: 390 SAEFLYGD-ERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP 448
S F G+ E + ++L SGD+ +FG +SR FHGV +I P + AL +
Sbjct: 196 SCIFRLGNTESRGRPYQDIVLRSGDLFVFGRQSRWAFHGVPAIRPGTGDPAL---GLRHG 252
Query: 449 GRLNLTFR 456
GRLN+T R
Sbjct: 253 GRLNITIR 260
>gi|421895707|ref|ZP_16326107.1| alkylated dna repair protein [Ralstonia solanacearum MolK2]
gi|206586872|emb|CAQ17457.1| alkylated dna repair protein [Ralstonia solanacearum MolK2]
Length = 218
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C++N Y RL LHQD+DE Y G P+VS S+G A FL+G R +K
Sbjct: 114 FPGFVPDACLINRYVPGARLSLHQDKDEQDY----GAPIVSVSLGIPAVFLWGGHRRTDK 169
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++V L GDV+++GG R +HGV + E+ +L R+NLT R+
Sbjct: 170 TQRVPLLHGDVVVWGGPDRLRYHGVLPLKEA-------EHPLLGAQRINLTLRR 216
>gi|190889680|ref|YP_001976222.1| alkylated DNA repair protein [Rhizobium etli CIAT 652]
gi|190694959|gb|ACE89044.1| alkylated DNA repair protein [Rhizobium etli CIAT 652]
Length = 203
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY+ R+GLHQDRDE PVVS S+G+S F G ++
Sbjct: 102 PEACLVNFYSDEARMGLHQDRDERNLQA----PVVSISLGNSCLFRVGGVIRNDRTLSFK 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+++ GGE R FHGV I+P ++ LL+N GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|419958235|ref|ZP_14474300.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
cloacae subsp. cloacae GS1]
gi|388606918|gb|EIM36123.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
cloacae subsp. cloacae GS1]
Length = 216
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 18/136 (13%)
Query: 324 MSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVV 383
M EA + D+ V+ P PD C++N Y +L LHQD+DE L+ P+V
Sbjct: 92 MPEAFQALCHDAAVAAG---YPDFRPDACLINRYAVGAKLSLHQDKDEP--DLRA--PIV 144
Query: 384 SFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP--GALL 441
S S+G A F +G R + ++++LE GDV+++GGESR +HG+ + P P GA
Sbjct: 145 SVSLGLPAVFQFGGLRRNDPLKRLMLEHGDVVVWGGESRLFYHGIQPLKPGDHPVAGAF- 203
Query: 442 ENTMLRPGRLNLTFRQ 457
R NLTFRQ
Sbjct: 204 --------RYNLTFRQ 211
>gi|83748960|ref|ZP_00945969.1| AlkB [Ralstonia solanacearum UW551]
gi|207744187|ref|YP_002260579.1| alkylated dna repair protein [Ralstonia solanacearum IPO1609]
gi|83724383|gb|EAP71552.1| AlkB [Ralstonia solanacearum UW551]
gi|206595592|emb|CAQ62519.1| alkylated dna repair protein [Ralstonia solanacearum IPO1609]
Length = 218
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C++N Y RL LHQD+DE Y G P+VS S+G A FL+G R +K
Sbjct: 114 FPGFVPDACLINRYVPGARLSLHQDKDEQDY----GAPIVSVSLGIPAVFLWGGHRRTDK 169
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++V L GDV+++GG R +HGV + E+ +L R+NLT R+
Sbjct: 170 TQRVPLLHGDVVVWGGPDRLRYHGVLPLKEA-------EHPLLGAQRINLTLRR 216
>gi|295098112|emb|CBK87202.1| DNA-N1-methyladenine dioxygenase [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 216
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 18/136 (13%)
Query: 324 MSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVV 383
M EA + D+ V+ P PD C++N Y +L LHQD+DE L+ P+V
Sbjct: 92 MPEAFQALCHDAAVAAG---YPDFRPDACLINRYAVGAKLSLHQDKDEP--DLRA--PIV 144
Query: 384 SFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP--GALL 441
S S+G A F +G R + ++++LE GDV+++GGESR +HG+ + P P GA
Sbjct: 145 SVSLGLPAVFQFGGLRRNDPLKRLMLEHGDVVVWGGESRLFYHGIQPLKPGDHPVAGAF- 203
Query: 442 ENTMLRPGRLNLTFRQ 457
R NLTFRQ
Sbjct: 204 --------RYNLTFRQ 211
>gi|388469937|ref|ZP_10144146.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
synxantha BG33R]
gi|388006634|gb|EIK67900.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
synxantha BG33R]
Length = 221
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 30/174 (17%)
Query: 286 CLGLDWDPQTRKYGKKRQVD--GCEP-SVIPSEFKQLVQRSMSEAHALIKMDSKVSNVED 342
C L W TR Y + +D +P +P +QL + +EA D
Sbjct: 72 CGALGWTTDTRGY-RYSPLDPRNQQPWPAMPDALRQLAMAAATEA-----------GFRD 119
Query: 343 ILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDAN 402
LP D C++N Y ++ LHQD++E YS PVVS S+G A FL+G ++
Sbjct: 120 FLP----DACLINRYVPGAKMSLHQDKNERSYSA----PVVSVSLGLPAIFLFGGHERSD 171
Query: 403 KAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
K +KV L GDV+++GG R FHGV I E+ ++ R+NLTFR
Sbjct: 172 KTQKVSLFHGDVVVWGGVDRLRFHGVMPIKAG-------EHPVMGAQRINLTFR 218
>gi|401764509|ref|YP_006579516.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
cloacae subsp. cloacae ENHKU01]
gi|400176043|gb|AFP70892.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
cloacae subsp. cloacae ENHKU01]
Length = 218
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 96/225 (42%), Gaps = 31/225 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG V+L+ + R L+ I + P F G + + M C L W
Sbjct: 15 LAPGAVILRRFALSRAATLLAGIEEVTAVSP--FRHMVTPGGYTMSVAMANCGELGWATN 72
Query: 295 TRKY--GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
R Y G +P+ F+ L + A P PD C
Sbjct: 73 ERGYLYAPNDPATGQPWPPMPAVFQALCHEAAVAAD---------------YPDFRPDAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y +L LHQD+DE L+ P+VS S+G A F +G R + ++++LE G
Sbjct: 118 LINRYAVGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAVFQFGGLRRNDPLKRIMLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
DV+++G ESR +HG+ + P P + R NLTFRQ
Sbjct: 174 DVVVWGRESRLYYHGIQPLKPGVHP-------LTGEYRFNLTFRQ 211
>gi|423691716|ref|ZP_17666236.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
fluorescens SS101]
gi|388000492|gb|EIK61821.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
fluorescens SS101]
Length = 221
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 26/146 (17%)
Query: 311 VIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRD 370
V+P+ +QL + +EA PD C++N Y ++ LHQD++
Sbjct: 99 VMPATLRQLAVAAATEAG---------------FSGFQPDACLINRYVPGAKMSLHQDKN 143
Query: 371 ESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSS 430
E YS PVVS S+G A FL+G ++K +KV L GDV+++GG R FHGV
Sbjct: 144 ERSYSA----PVVSVSLGLPAVFLFGGHSRSDKTQKVSLFHGDVVVWGGVDRLRFHGVMP 199
Query: 431 INPNSAPGALLENTMLRPGRLNLTFR 456
I P ++ P R+NLTFR
Sbjct: 200 IKDGVHP-------VMGPQRINLTFR 218
>gi|218515447|ref|ZP_03512287.1| alkylated DNA repair protein [Rhizobium etli 8C-3]
Length = 203
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY+ R+GLHQDRDE PVVS S+G+S F G ++
Sbjct: 102 PEACLVNFYSDEARMGLHQDRDERNLQA----PVVSISLGNSCLFRVGGLIRNDRTLSFK 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+++ GGE R FHGV I+P ++ LL+N GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|420238105|ref|ZP_14742535.1| alkylated DNA repair protein [Rhizobium sp. CF080]
gi|398088703|gb|EJL79260.1| alkylated DNA repair protein [Rhizobium sp. CF080]
Length = 213
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C++NFY+ R+GLHQDRDE+ + PV+S S+G+S F G + +
Sbjct: 102 PEACLINFYSDDARMGLHQDRDENDLAA----PVLSVSLGNSCLFRVGGLNRKDSTCSLR 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGDV++ GGE R FHGV I P ++ LL+N GR+NLT R+
Sbjct: 158 LASGDVVVLGGEGRLAFHGVDRIYPGTS--TLLKNG----GRINLTLRR 200
>gi|384220473|ref|YP_005611639.1| alkylated DNA repair protein [Bradyrhizobium japonicum USDA 6]
gi|354959372|dbj|BAL12051.1| alkylated DNA repair protein [Bradyrhizobium japonicum USDA 6]
Length = 217
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 31/222 (13%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--DPQT 295
G VLL+ ++ E LIV + + + P F + G ++ + M C W D
Sbjct: 22 GAVLLRGFVRPIEGELIVAVRAIVAQSP--FRRMTTPGGYQMSVAMTNCGERGWITDHTG 79
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y G +P + L +R+ + +PD C+VN
Sbjct: 80 YRYDPIDPRAGAPWPAMPPVLRDLARRAAEQGG---------------FTGFAPDACLVN 124
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVL 415
Y RL LHQD+DE YS P+VS S+G A FL+G ++K + L GDV+
Sbjct: 125 RYEPGTRLSLHQDKDELDYSA----PIVSVSLGLPATFLFGGLARSDKPRRFRLVHGDVV 180
Query: 416 IFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++GG SR +HGV AP A E+ +L R+NLTFR+
Sbjct: 181 VWGGPSRLAYHGV-------APLADGEHALLGRQRINLTFRR 215
>gi|296103853|ref|YP_003613999.1| DNA-N1-methyladenine dioxygenase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295058312|gb|ADF63050.1| DNA-N1-methyladenine dioxygenase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 218
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 96/227 (42%), Gaps = 35/227 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG V+L+ + R L+ I P F G + + M C W
Sbjct: 15 LAPGAVILRRFALSRASALLAGIQDVAAVSP--FRHMVTPGGYTMSVAMTNCGTAGWATN 72
Query: 295 TRKY--GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
R Y V G +P+ F+ L + VE P PD C
Sbjct: 73 ERGYLYAPDDPVTGKPWPPMPAVFQALCHDA---------------AVEATYPDFQPDAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y +L LHQD+DE L+ P+VS S+G A F +G R + ++++LE G
Sbjct: 118 LINRYGVGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLRRNDPLQRLMLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFRQ 457
DV+++G ESR +HG+ + P P G R NLTFRQ
Sbjct: 174 DVVVWGRESRLYYHGIQPLKPGVHPQTGEF---------RFNLTFRQ 211
>gi|443310909|ref|ZP_21040547.1| alkylated DNA repair protein [Synechocystis sp. PCC 7509]
gi|442779080|gb|ELR89335.1| alkylated DNA repair protein [Synechocystis sp. PCC 7509]
Length = 203
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C++N Y +LGLHQD E K P++S S+GDS F+ G ++ ++ +
Sbjct: 103 PESCLINLYRKGEKLGLHQDNTEE----NKNAPIISISLGDSGIFILGGLMRTDETKQYI 158
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++SGD+++ GGESR+ FH PN++ N + GRLNLT RQ
Sbjct: 159 VQSGDIIVLGGESRNFFHAFKGTVPNTS------NLLKDGGRLNLTIRQ 201
>gi|94314187|ref|YP_587396.1| alpha-ketoglutarate-dependent dioxygenase alkB [Cupriavidus
metallidurans CH34]
gi|93358039|gb|ABF12127.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Cupriavidus metallidurans CH34]
Length = 223
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 11/113 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P +PD C++N Y RL LHQDRDE L P+VS S+G A FL+G R A++
Sbjct: 120 PGFAPDACLINRYLPGTRLSLHQDRDE----LDLRAPIVSVSMGLPAVFLWGGLRRADRP 175
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ L GDV+++GG SR VFHG+ AP A ++ + R+NLTFR+
Sbjct: 176 GRFRLAHGDVVVWGGPSRLVFHGI-------APLADGDHALTGSERINLTFRK 221
>gi|283786025|ref|YP_003365890.1| alpha-ketoglutarate-dependent dioxygenase (alkylated DNA repair
protein) [Citrobacter rodentium ICC168]
gi|282949479|emb|CBG89092.1| alpha-ketoglutarate-dependent dioxygenase (alkylated DNA repair
protein) [Citrobacter rodentium ICC168]
Length = 216
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 97/224 (43%), Gaps = 31/224 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG +L+ + Q L+ I + P F Q G + + M C L W
Sbjct: 15 LAPGATVLRRFAFSTAQQLMQDIETVASRSP--FRQMVTPGGYTMSVAMTNCGQLGWTTD 72
Query: 295 TRKY--GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
R Y + G P+ F L QR+ + A P PD C
Sbjct: 73 RRGYLYSAIDPLTGSAWPPFPAAFVDLCQRAATAAG---------------YPDFQPDAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE G
Sbjct: 118 LINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAVFQFGGLKRNDPLQRILLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
DV+++GGESR +HG+ + P + R NLTFR
Sbjct: 174 DVVVWGGESRLFYHGIQPLKAGFHP-------LTGDCRYNLTFR 210
>gi|25026699|ref|NP_736753.1| hypothetical protein CE0143 [Corynebacterium efficiens YS-314]
gi|259508167|ref|ZP_05751067.1| DNA repair protein [Corynebacterium efficiens YS-314]
gi|23491978|dbj|BAC16953.1| hypothetical protein [Corynebacterium efficiens YS-314]
gi|259164256|gb|EEW48810.1| DNA repair protein [Corynebacterium efficiens YS-314]
Length = 237
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 107/224 (47%), Gaps = 23/224 (10%)
Query: 239 GMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
G+V L +L + EQ +V I + + P +P G ++ + ++ LG W
Sbjct: 29 GVVHLPDWLPLGEQAAVVEEARGIARSVAGTPLAMTRPQLRSG-QMSVHILSLGQHW--A 85
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
T Y V G IP+ F L R++++A AL + S + +V
Sbjct: 86 TNPYRYVTSVGGVAVPPIPASFHDLAARALADAAALSPPLAAWSG------KYRAEAALV 139
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE-KVLLESGD 413
N+Y +G+HQD +E + PV+S S+GD+ F G+ + N+ V L SGD
Sbjct: 140 NYYAPGSAMGMHQDANELSEA-----PVISLSIGDTGIFRLGNTDNRNRPWVDVPLLSGD 194
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++IFGGE R FHGV I ++AP E L GR+N+T RQ
Sbjct: 195 LIIFGGEHRRAFHGVPRIEADTAP----EGCGLDRGRINITIRQ 234
>gi|423121343|ref|ZP_17109027.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5246]
gi|376394178|gb|EHT06829.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5246]
Length = 218
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 103/226 (45%), Gaps = 35/226 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG +L+ + R L+ I Q + P F Q G + + M C + W D
Sbjct: 15 LAPGATILRRFAHRRAAALLQAIMQVASRSP--FRQMVTPGGYTMSVAMTNCGRVGWTTD 72
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y + G +P+ F+QL A A + P +PD C
Sbjct: 73 MHGYLYAPDDPLTGQRWPSMPTIFRQLA------AEAALACG---------YPDFAPDAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y +L LHQD+DE L+ P+VS S+G SA F +G R ++ ++VLLE G
Sbjct: 118 LINRYQPGAKLSLHQDKDER--DLRA--PIVSVSLGLSAVFQFGGLRRSDPLQRVLLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFR 456
DV+++GGESR +HG+ + P GA R NLTFR
Sbjct: 174 DVVVWGGESRLFYHGIQPLKEGDHPQTGAC---------RYNLTFR 210
>gi|116249805|ref|YP_765643.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115254453|emb|CAK05527.1| putative alkylated DNA repair protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 203
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY+ R+GLHQD+DE LK PVVS S+G+S F G ++
Sbjct: 102 PEACLVNFYSDEARMGLHQDKDEQ--DLKA--PVVSISLGNSCLFRVGGLSRNDRTLSFK 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+++ GGE R FHGV I+P ++ LL+N GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|424873011|ref|ZP_18296673.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393168712|gb|EJC68759.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 203
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY+ R+GLHQD+DE LK PVVS S+G+S F G ++
Sbjct: 102 PEACLVNFYSDEARMGLHQDKDEQ--DLKA--PVVSISLGNSCLFRVGGLSRNDRTLSFK 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+++ GGE R FHGV I+P ++ LL+N GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|357590600|ref|ZP_09129266.1| alkylated DNA repair protein [Corynebacterium nuruki S6-4]
Length = 226
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 21/201 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L G V + +LT +Q ++ +GP +P G ++ RM+CLG W P
Sbjct: 25 LPAGAVHVPGWLTEGQQQDLLDRVATWARGPVAPARPRTASG-EMSSRMLCLGRHWVPTA 83
Query: 296 RKYGK--KRQVDGCEPSV--IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
+ + R VDG V +P E L +R++ A D + + SPDI
Sbjct: 84 PRGHRYFDRAVDGNGAPVLPVPPELVTLARRAVFAATG----DGRAAG------RYSPDI 133
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLE 410
+VN Y +G+H+D DE+ + PVVS S+G + F +G+ D ++ + L
Sbjct: 134 AVVNIYGPDAHMGMHRDDDEASEA-----PVVSLSLGAACRFRFGNATDRSRPYTDLTLA 188
Query: 411 SGDVLIFGGESRHVFHGVSSI 431
GD+ +FGG +R +HGV I
Sbjct: 189 PGDLFVFGGPARWNYHGVQKI 209
>gi|430005787|emb|CCF21590.1| Alpha-ketoglutarate-dependent dioxygenase alkB homolog [Rhizobium
sp.]
Length = 203
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY+ R+GLHQD+DE+ S PV+S S+G++ F G
Sbjct: 102 PEACLVNFYDDQARMGLHQDKDETDLSA----PVLSISLGNTCLFRIGGTERKEPTHSFR 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGDVL+ GG R FHGV + P ++ LL N GR+NLT R+
Sbjct: 158 LTSGDVLVLGGAGRLCFHGVDRVYPETS--TLLRNG----GRINLTLRR 200
>gi|27378074|ref|NP_769603.1| alkylated DNA repair protein [Bradyrhizobium japonicum USDA 110]
gi|27351220|dbj|BAC48228.1| alkylated DNA repair protein [Bradyrhizobium japonicum USDA 110]
Length = 173
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 75/152 (49%), Gaps = 26/152 (17%)
Query: 306 GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGL 365
G +P F+ L +R+ + +PD C+VN Y RL L
Sbjct: 46 GVPWPAMPPAFRDLARRAAEQGG---------------FTGFAPDACLVNRYEPGTRLSL 90
Query: 366 HQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVF 425
HQD+DE Y+ P+VS S+G A FL+G ++K + L GDV+++GG SR +
Sbjct: 91 HQDKDELDYAA----PIVSVSLGLPATFLFGGMARSDKPRRFRLVHGDVVVWGGASRLAY 146
Query: 426 HGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
HGV AP A E+ +L R+NLTFR+
Sbjct: 147 HGV-------APLADGEHALLGRQRINLTFRK 171
>gi|374574271|ref|ZP_09647367.1| alkylated DNA repair protein [Bradyrhizobium sp. WSM471]
gi|374422592|gb|EHR02125.1| alkylated DNA repair protein [Bradyrhizobium sp. WSM471]
Length = 217
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 65/111 (58%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C+VN Y RL LHQD+DE YS P+VS S+G A FL+G ++K +
Sbjct: 116 FAPDACLVNRYEPGTRLSLHQDKDELDYSA----PIVSVSLGLPATFLFGGMARSDKPRR 171
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG SR +HGV AP A E+ +L R+NLTFR+
Sbjct: 172 FRLVHGDVVVWGGPSRLAYHGV-------APLADGEHALLGRKRVNLTFRK 215
>gi|408481777|ref|ZP_11187996.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
R81]
Length = 221
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 63/110 (57%), Gaps = 11/110 (10%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y ++ LHQD++E RYS PVVS S+G A FL+G ++K K
Sbjct: 120 FAPDACLINRYVPGAKMSLHQDKNERRYSE----PVVSISLGLPAIFLFGGHERSDKPRK 175
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
V L GDV+++GG R FHGV I P ++ P R+NLTFR
Sbjct: 176 VSLFHGDVVVWGGVDRLRFHGVMPIKDGVHP-------IMGPQRINLTFR 218
>gi|398792788|ref|ZP_10553349.1| alkylated DNA repair protein [Pantoea sp. YR343]
gi|398212485|gb|EJM99093.1| alkylated DNA repair protein [Pantoea sp. YR343]
Length = 213
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L G V+L+ + L+ I K P F G ++ + M C W
Sbjct: 15 LADGAVILRRRAREQGDALLAAIHDVAAKNP--FAHRITPGGHRMSVAMTNCGDFGWSTD 72
Query: 295 TRKYGKKRQ--VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
+R Y Q G +P+ F++L Q + EA +PD C
Sbjct: 73 SRGYQYTEQDSNSGHHWPPMPALFRELAQHTAREAG---------------FAGFNPDAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y +L LHQD+DE L++ P+VS S+G A F +G + ++VLLE G
Sbjct: 118 LINRYEPGAKLTLHQDKDEK--DLRQ--PIVSVSLGLPAVFQFGGFERGDATQRVLLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFRQ 457
D++++GG SR +HG+ + P P GA R NLTFR+
Sbjct: 174 DIVVWGGPSRLRYHGILPLKPGIHPQAGAF---------RFNLTFRR 211
>gi|259417948|ref|ZP_05741867.1| hypothetical protein SCH4B_3373 [Silicibacter sp. TrichCH4B]
gi|259346854|gb|EEW58668.1| hypothetical protein SCH4B_3373 [Silicibacter sp. TrichCH4B]
Length = 200
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 33/191 (17%)
Query: 269 FYQPGYNDGAKLRLRMMCLG-LDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMS 325
+ P G ++ +RM G W D +Y + P IP+E ++
Sbjct: 37 LFSPEVPGGGQMSVRMTSAGAFGWFSDKSGYRYADRHPSGQAWPE-IPAEVLKIWT---- 91
Query: 326 EAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSF 385
ALI D PD C+ N+Y R+GLHQD+DE+ +S PVVS
Sbjct: 92 ---ALIDRDRM------------PDCCLFNYYGEGARMGLHQDKDEADFSY----PVVSI 132
Query: 386 SVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTM 445
S+GD G K E + L SGDV++ GG++R +HGV I S+ +
Sbjct: 133 SLGDDGLLRVGGTSRKEKTESIWLNSGDVVVMGGDARLAYHGVDRIRFRSS------RLL 186
Query: 446 LRPGRLNLTFR 456
+ GR+NLT R
Sbjct: 187 PKGGRVNLTLR 197
>gi|119386500|ref|YP_917555.1| 2OG-Fe(II) oxygenase [Paracoccus denitrificans PD1222]
gi|119377095|gb|ABL71859.1| DNA-N1-methyladenine dioxygenase [Paracoccus denitrificans PD1222]
Length = 218
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 36/178 (20%)
Query: 286 CLGLDWDPQTRKYGKKRQVDGCEP------SVIPSEFKQLVQRSMSEAHALIKMDSKVSN 339
C L W R Y + + C+P +P+ F QL + + A
Sbjct: 69 CGALGWVSDRRGY----RYEPCDPLTGRPWPAMPARFLQLADEAAARAG----------- 113
Query: 340 VEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDER 399
P PD C+VN Y ++GLHQDRDE+ + P+VS S+G A F +G
Sbjct: 114 ----FPGFRPDACLVNRYVPGVKMGLHQDRDEAGFDA----PIVSVSLGLPATFQFGGPE 165
Query: 400 DANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++ K +L+ GDV+++GG +R +HG+ ++ E+ + R+NLTFR+
Sbjct: 166 RSDPVAKHVLDHGDVVVWGGPARLAWHGILTLR-------RAEHPLTGAARINLTFRR 216
>gi|237801353|ref|ZP_04589814.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331024212|gb|EGI04269.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 227
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 28/174 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D +Y + G + S +P F QL Q + +A
Sbjct: 76 CGQLGWITDRHGYRYSETDPQTGSKWSAMPDAFMQLAQSAALKAG--------------- 120
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P +PD C++N Y ++ LHQD+DE + PVVS S+G A F +G ++K
Sbjct: 121 YPGFTPDACLINRYIPGAKMSLHQDKDEHDHRW----PVVSVSLGIPAIFQFGGLLRSDK 176
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
A ++ L GDV+++GGE R FHG+ + E+ +L R+NLTFR+
Sbjct: 177 ALRISLFHGDVVVWGGEDRLRFHGILPVKQA-------EHPLLGEQRINLTFRK 223
>gi|17547287|ref|NP_520689.1| alkylated DNA repair protein [Ralstonia solanacearum GMI1000]
gi|17429589|emb|CAD16275.1| probable alkylated dna repair protein [Ralstonia solanacearum
GMI1000]
Length = 218
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P +PD C++N Y RL LHQD+DE Y G P+VS S+G A FL+G R +K
Sbjct: 114 FPGFTPDACLINRYVPGARLSLHQDKDEQDY----GAPIVSVSLGMPAMFLWGGHRRTDK 169
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+V L GDV+++GG R +HGV + + P +L R+NLT R+
Sbjct: 170 TLRVPLFHGDVVVWGGPDRLRYHGVLPLKEAAHP-------LLGAQRINLTLRR 216
>gi|292488806|ref|YP_003531693.1| alpha-ketoglutarate-dependent dioxygenase alkB [Erwinia amylovora
CFBP1430]
gi|292899959|ref|YP_003539328.1| alkylated DNA repair protein [Erwinia amylovora ATCC 49946]
gi|428785757|ref|ZP_19003246.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Erwinia amylovora
ACW56400]
gi|291199807|emb|CBJ46930.1| alkylated DNA repair protein [Erwinia amylovora ATCC 49946]
gi|291554240|emb|CBA21524.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Erwinia amylovora
CFBP1430]
gi|312172963|emb|CBX81218.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Erwinia amylovora
ATCC BAA-2158]
gi|426275621|gb|EKV53350.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Erwinia amylovora
ACW56400]
Length = 224
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 82/175 (46%), Gaps = 32/175 (18%)
Query: 286 CLGLDWDPQTRKYGKKR--QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W +R Y + + G +P F+QL Q EA
Sbjct: 64 CGDLGWSSDSRGYHYRTLDEASGQRWPAMPPPFRQLAQECAREAG--------------- 108
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
PD C++N Y + ++ LHQD+DE L++ P+VS S+G A FL+G ++
Sbjct: 109 FGGFDPDACLINRYESGAKMTLHQDKDER--DLRQ--PIVSVSLGLPAVFLFGGFTRSDA 164
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFR 456
+ +VLLE GDV+++GG SR +HG+ + P GA R NLTFR
Sbjct: 165 SRRVLLEHGDVVVWGGPSRLRYHGILPLKAGIHPLTGAF---------RFNLTFR 210
>gi|188533377|ref|YP_001907174.1| DNA repair system specific for alkylated DNA [Erwinia tasmaniensis
Et1/99]
gi|188028419|emb|CAO96280.1| DNA repair system specific for alkylated DNA [Erwinia tasmaniensis
Et1/99]
Length = 213
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 82/176 (46%), Gaps = 32/176 (18%)
Query: 286 CLGLDWDPQTR--KYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W +R +Y + + G +P F +L + EA
Sbjct: 64 CGALGWSADSRGYQYSAQDEFSGQGWPAMPQTFHRLAEECAREAG--------------- 108
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
+PD C++N Y +L LHQD+DE L++ P+VS S+G A FL+G +
Sbjct: 109 FAGFNPDACLINRYEPGAKLTLHQDKDER--DLRQ--PIVSVSLGLPAVFLFGGFERGDA 164
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFRQ 457
++VLLE GDV+++GG SR +HG+ + P GA R NLTFR+
Sbjct: 165 TQRVLLEHGDVVVWGGPSRLRYHGILPLKAGIHPLTGAF---------RFNLTFRR 211
>gi|108763595|ref|YP_634074.1| alkylated DNA repair protein AlkB [Myxococcus xanthus DK 1622]
gi|108467475|gb|ABF92660.1| alkylated DNA repair protein AlkB [Myxococcus xanthus DK 1622]
Length = 215
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 47/237 (19%)
Query: 232 REGILRPGMVLLKHYLTIREQILIVRICQELG--------KGPGGFYQPGYNDGAKLRLR 283
RE L PG V+L+ + + L+ + Q++ + PGGF ++ +
Sbjct: 13 REESLGPGAVVLRGFALSHDAELLSAV-QDVALASPFRHMETPGGF---------RMSVA 62
Query: 284 MM-CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
M C W D +Y V G +P+ F +L Q + ++A
Sbjct: 63 MTSCGSWGWVTDRTGYRYAAVDPVQGRPWPEMPAIFLRLAQFAAAKA-----------GF 111
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
E +P D C+VN Y ++ LHQD+DE ++ P+VS S+G A FL+G
Sbjct: 112 EGFIP----DACLVNRYEPGAKMSLHQDKDERDFTA----PIVSVSLGLPAVFLFGGAER 163
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
A++ +V L GDV+++GG +R +HGV+ + P P + R+NLTFR+
Sbjct: 164 ADRPARVRLSHGDVVVWGGPARLRYHGVTPLEPGHHP-------QVGGHRINLTFRK 213
>gi|392980003|ref|YP_006478591.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
cloacae subsp. dissolvens SDM]
gi|392325936|gb|AFM60889.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
cloacae subsp. dissolvens SDM]
Length = 216
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 96/227 (42%), Gaps = 35/227 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG V+L+ + R L+ I P F G + + M C W
Sbjct: 15 LAPGAVILRRFALSRAPELLAGIHDVAAVSP--FRHMVTPGGYTMSVAMTNCGTAGWATN 72
Query: 295 TRKY--GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
R Y V G +P+ F+ L + VE P PD C
Sbjct: 73 ERGYLYAADDPVTGQPWPPMPAVFQALCHDA---------------AVEATYPDFQPDAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y +L LHQD+DE L+ P+VS S+G A F +G R + ++++LE G
Sbjct: 118 LINRYGVGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAVFQFGGLRRNDPLQRLMLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFRQ 457
DV+++G ESR +HG+ + P P G R NLTFRQ
Sbjct: 174 DVVVWGRESRLYYHGIQPLKPGVHPQTGEF---------RFNLTFRQ 211
>gi|238789143|ref|ZP_04632931.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Yersinia
frederiksenii ATCC 33641]
gi|238722675|gb|EEQ14327.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Yersinia
frederiksenii ATCC 33641]
Length = 221
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 101/239 (42%), Gaps = 51/239 (21%)
Query: 230 WTREGILRPGMVLLKHYLTIREQILI--VRICQELGK-----GPGGFYQPGYNDGAKLRL 282
WT E L PG ++L Y + +L+ V EL PGG+ ++ +
Sbjct: 14 WTEE--LAPGAIVLHLYAQEQASLLLADVAAITELAVFRHLITPGGY---------RMSV 62
Query: 283 RMM-CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSN 339
M C W D Q +Y + IP+ F L + EA
Sbjct: 63 AMSNCGSAGWVSDAQGYRYSPIDPLTDKAWPAIPTRFMALAISAAREAG----------- 111
Query: 340 VEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDER 399
PD C++N Y +L LHQD+DE L P+VS S+G A F +G
Sbjct: 112 ----FTHFQPDACLINRYEVGAKLSLHQDKDE----LDLRQPIVSVSLGLPAIFQFGGLS 163
Query: 400 DANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG--RLNLTFR 456
K ++VLL GDV+++GG SR +HGV I P +P R G R+NLTFR
Sbjct: 164 REAKCQRVLLAEGDVVVWGGPSRLNYHGVLPIKPGFSP---------RAGAYRINLTFR 213
>gi|421589908|ref|ZP_16034985.1| 2OG-Fe(II) oxygenase [Rhizobium sp. Pop5]
gi|403705042|gb|EJZ20746.1| 2OG-Fe(II) oxygenase [Rhizobium sp. Pop5]
Length = 203
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY+ R+GLHQD+DE PVVS S+G+S F G ++
Sbjct: 102 PEACLVNFYSDDARMGLHQDKDEQDLQA----PVVSISLGNSCLFRVGGLNRNDRTLSFK 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+++ GGE R FHGV I+P ++ LL+N GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|409439665|ref|ZP_11266714.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Rhizobium mesoamericanum STM3625]
gi|408749041|emb|CCM77895.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Rhizobium mesoamericanum STM3625]
Length = 202
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P C+VNFY+ R+GLHQD+DE + PVVS S+G+S F G ++
Sbjct: 101 PQACLVNFYSDEARMGLHQDKDEQDLAA----PVVSISLGNSCLFRVGGLAHNDRTLSFR 156
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGDV+I G E R FHGV I P+++ LL+N GR+NLT R+
Sbjct: 157 LSSGDVVILGAEGRLCFHGVDKIYPSTS--TLLKNG----GRINLTLRR 199
>gi|421850798|ref|ZP_16283743.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus NBRC
101655]
gi|371458359|dbj|GAB28946.1| DNA repair protein for alkylated DNA [Acetobacter pasteurianus NBRC
101655]
Length = 222
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 97/226 (42%), Gaps = 35/226 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--D 292
L G VLL + + ++ I + P F + G ++ + M C G W
Sbjct: 23 LDAGAVLLPAFALHDAETCMLAIHHIAQQAP--FRKMHTPGGGQMSVAMTCCGTFGWIST 80
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Q Y K +P+ F+ L ++ +A P+ C
Sbjct: 81 AQGYSYTKVNPFTSQPWPDMPAIFQALAHKAAQKAG---------------FAQFQPNAC 125
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y+ R+GLHQDRDE PVVS S G A FL+G + ++ ++LL+ G
Sbjct: 126 LINSYSPGARMGLHQDRDEG----CTDQPVVSLSFGLEATFLWGGLKRSHPTRQILLKDG 181
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG--RLNLTFR 456
DVL++GG R FHGV I+ +R G RLN+TFR
Sbjct: 182 DVLVWGGPDRLRFHGVKPIH---------SGAHIRTGETRLNITFR 218
>gi|340793927|ref|YP_004759390.1| hypothetical protein CVAR_0963 [Corynebacterium variabile DSM
44702]
gi|340533837|gb|AEK36317.1| hypothetical protein CVAR_0963 [Corynebacterium variabile DSM
44702]
Length = 223
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 232 REGILRP-GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
RE + P G L +LT+ +Q IVR ++ GP +P Y G ++ + M+ LG
Sbjct: 21 REPVDLPSGARFLPDWLTMDQQQWIVRQYRQWRNGPVPPRRPRYGSG-QMSVEMLSLGWH 79
Query: 291 WDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPD 350
W + VD ++P + KV + P +PD
Sbjct: 80 W---AGNGFSRNAVDVNNARILP----------------MPDWAVKVGRMVTGDPTYTPD 120
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLL 409
+ N Y +G+H+D DES + PVVS S+GD+ F +G+ K V L
Sbjct: 121 SLLANHYGPGATMGMHRDADESSPA-----PVVSLSIGDTCRFRFGNAETRTKPYTDVEL 175
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
SGD +FGG +R FHGV + +AP GRLN+T R
Sbjct: 176 RSGDAFVFGGPARWNFHGVPRVLDGTAPDECGIT-----GRLNITMR 217
>gi|241766555|ref|ZP_04764415.1| DNA-N1-methyladenine dioxygenase [Acidovorax delafieldii 2AN]
gi|241363209|gb|EER58787.1| DNA-N1-methyladenine dioxygenase [Acidovorax delafieldii 2AN]
Length = 181
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 67/113 (59%), Gaps = 15/113 (13%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y RL LHQD+DE Y+ P+VS S+G SA FL+G + ++A +
Sbjct: 80 FAPDACLINRYAPGTRLSLHQDKDEGNYAH----PIVSVSLGVSALFLWGGAQRGDRARR 135
Query: 407 VLLESGDVLIFGGESRHVFHGVSSI--NPNSAPGALLENTMLRPGRLNLTFRQ 457
+ L GDV+++GG +R FHGV + +S GAL R+NLTFR+
Sbjct: 136 IPLAHGDVVVWGGPARLRFHGVLPLPEASHSLTGAL---------RINLTFRK 179
>gi|83855402|ref|ZP_00948932.1| alkylated DNA repair protein, putative [Sulfitobacter sp. NAS-14.1]
gi|83843245|gb|EAP82412.1| alkylated DNA repair protein, putative [Sulfitobacter sp. NAS-14.1]
Length = 200
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 36/222 (16%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--DPQT 295
G + K YLT+ Q ++ + + K F++P G ++ +RM G W D Q
Sbjct: 8 GFEIHKSYLTLSAQRGLLDAVRGVVKQVP-FFRPVMPSGQQMSVRMTSAGDYGWLSDTQG 66
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y +G IP+E ++ + + ++ +E P+ C++N
Sbjct: 67 YRYAPTHP-NGTPWPAIPTE--------------VLAIWNDLTGLER-----QPESCLIN 106
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVL 415
+Y + ++GLHQD++E+ + PVVS S+GD G ++ K + + L+SGDV+
Sbjct: 107 YYASDAKMGLHQDKNETDFRW----PVVSISLGDEGMLRVGGQKRGGKTDSLWLQSGDVV 162
Query: 416 IFGGESRHVFHGVSSINPNSAPGALLENTML-RPGRLNLTFR 456
+ GGE+R +HG+ I S+ T+L + GR+N+T R
Sbjct: 163 VMGGEARLNYHGIDRIRAGSS-------TLLPKGGRINITLR 197
>gi|398809844|ref|ZP_10568685.1| alkylated DNA repair protein [Variovorax sp. CF313]
gi|398084936|gb|EJL75607.1| alkylated DNA repair protein [Variovorax sp. CF313]
Length = 227
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+PD C+VN Y RL LHQDRDE Y G P+VS S+G A FL+G KA
Sbjct: 125 GFAPDACLVNRYAPGARLSLHQDRDERDY----GAPIVSVSLGMPAVFLFGGLARGGKAV 180
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++ L GDV+++GGE R +HGV + P +L R+NLTFR+
Sbjct: 181 RIPLIHGDVVVWGGEDRLRYHGVLPLKDEPHP-------LLGAIRINLTFRK 225
>gi|389796691|ref|ZP_10199742.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodanobacter sp.
116-2]
gi|388448216|gb|EIM04201.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodanobacter sp.
116-2]
Length = 218
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 64/109 (58%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y RL LHQDRDE G P+VS S+G A FL+G + ++ ++V
Sbjct: 119 PDACLVNRYEAGTRLSLHQDRDEH----DLGQPIVSVSLGIPAVFLFGGLQRSDYPQRVP 174
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG +R +HGV + PN + +L R+NLTFR+
Sbjct: 175 LAHGDVVVWGGPARLRYHGVLPLKPN-------HHAVLGDCRINLTFRR 216
>gi|417106609|ref|ZP_11962279.1| alkylated DNA repair protein [Rhizobium etli CNPAF512]
gi|327189994|gb|EGE57116.1| alkylated DNA repair protein [Rhizobium etli CNPAF512]
Length = 203
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY+ R+GLHQD+DE PVVS S+G S F G ++
Sbjct: 102 PEACLVNFYSDEARMGLHQDKDERNLQA----PVVSISLGSSCLFRVGGLNRNDRTLSFK 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+++ GGE R FHGV I+P ++ LL+N GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|296448181|ref|ZP_06890079.1| 2OG-Fe(II) oxygenase [Methylosinus trichosporium OB3b]
gi|296254312|gb|EFH01441.1| 2OG-Fe(II) oxygenase [Methylosinus trichosporium OB3b]
Length = 205
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P C+VN Y+++ R+GLHQDRDE+ P++S S+G F G + + +
Sbjct: 100 PQACLVNVYDSAARMGLHQDRDEAALDA----PILSISLGADCRFRLGGAKRGDPSRAFA 155
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD L GG R FHGV I P AP L+ + + GR+NLT R+
Sbjct: 156 LSSGDALTLGGPGRLRFHGVDKILPEIAP-RLVSPLLAQGGRVNLTLRR 203
>gi|288934299|ref|YP_003438358.1| 2OG-Fe(II) oxygenase [Klebsiella variicola At-22]
gi|290508502|ref|ZP_06547873.1| alkylated DNA repair protein [Klebsiella sp. 1_1_55]
gi|288889028|gb|ADC57346.1| 2OG-Fe(II) oxygenase [Klebsiella variicola At-22]
gi|289777896|gb|EFD85893.1| alkylated DNA repair protein [Klebsiella sp. 1_1_55]
Length = 217
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG V+L+ + R L+ I + P F Q G + + M C L W
Sbjct: 15 LAPGAVVLRRFARERAPALLQAIADVARQSP--FRQMVTPGGYTMSVAMTNCGALGW--T 70
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
T ++G D +P L ++ A+ + + + P SPD C++
Sbjct: 71 TDRHGYL--YDPVDP---------LTDQTWPPMPAVFRELALAAAAAGGYPNFSPDACLI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
N Y +L LHQD+DE L+ P+VS S+G A F +G + ++ +++LLE GDV
Sbjct: 120 NRYQPGAKLSLHQDKDEQ--DLRA--PIVSVSLGLPAIFQFGGLQRSDPLQRLLLEHGDV 175
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++GGESR +HG+ + P E R NLTFRQ
Sbjct: 176 VVWGGESRLFYHGIQPLKAGHHP----ETGDC---RYNLTFRQ 211
>gi|378580368|ref|ZP_09829026.1| alkylated DNA repair protein [Pantoea stewartii subsp. stewartii
DC283]
gi|377817177|gb|EHU00275.1| alkylated DNA repair protein [Pantoea stewartii subsp. stewartii
DC283]
Length = 213
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 36/178 (20%)
Query: 286 CLGLDWDPQTR--KYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C W R +Y ++ + +P F+ L +++ EA
Sbjct: 64 CGDFGWSTDARGYRYSEQDSTHQRQWPAMPETFRLLARQAAEEAG--------------- 108
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGL--PVVSFSVGDSAEFLYGDERDA 401
PA +PD C++N Y +L LHQD+DE K L P+VS S+G A F +G +
Sbjct: 109 FPAFNPDACLINRYEPGAKLTLHQDKDE------KDLLQPIVSVSLGLPAVFQFGGFERS 162
Query: 402 NKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFRQ 457
++A++VLLE GDV+++GG SR +HG+ + P GA R NLTFR+
Sbjct: 163 DQAQRVLLEHGDVVVWGGPSRLRYHGILPLKAGIHPLTGAF---------RYNLTFRR 211
>gi|432719334|ref|ZP_19954303.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE9]
gi|431263146|gb|ELF55135.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE9]
Length = 216
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 97/235 (41%), Gaps = 51/235 (21%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--- 291
L PG V+L + + LI I + P F Q G + + M C L W
Sbjct: 15 LAPGAVILHRFAFNAAEQLIRDINDVASQSP--FRQMVTPGGYTMSVAMTNCGHLGWTTH 72
Query: 292 ---------DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVED 342
DPQT K +P F L QR+ + A
Sbjct: 73 RQGYLYSPIDPQTNKPWPD----------MPQSFHDLCQRAATAAD-------------- 108
Query: 343 ILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDAN 402
P PD C++N Y +L LHQD+DE P+VS S+G A F +G + +
Sbjct: 109 -YPDFQPDACLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRND 163
Query: 403 KAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++LLE GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 164 PLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHP-------LTADCRYNLTFRQ 211
>gi|352082119|ref|ZP_08952942.1| 2OG-Fe(II) oxygenase [Rhodanobacter sp. 2APBS1]
gi|351682257|gb|EHA65363.1| 2OG-Fe(II) oxygenase [Rhodanobacter sp. 2APBS1]
Length = 218
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 64/109 (58%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y RL LHQDRDE G P+VS S+G A FL+G + ++ ++V
Sbjct: 119 PDACLVNRYEAGTRLSLHQDRDEH----DLGQPIVSVSLGIPAVFLFGGLQRSDYPQRVP 174
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG +R +HGV + PN + +L R+NLTFR+
Sbjct: 175 LAHGDVVVWGGPARLRYHGVLPLKPN-------HHAVLGDCRINLTFRR 216
>gi|402843977|ref|ZP_10892356.1| putative alkylated DNA repair protein AlkB [Klebsiella sp. OBRC7]
gi|423104013|ref|ZP_17091715.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5242]
gi|376385655|gb|EHS98376.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5242]
gi|402275785|gb|EJU24921.1| putative alkylated DNA repair protein AlkB [Klebsiella sp. OBRC7]
Length = 216
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG ++L+ Y R +L+ I + + P F Q G + + M C L W
Sbjct: 15 LAPGAIILRRYARARAPVLLQAISEIASRSP--FRQMVTPGGYTMSVAMTNCGELGWT-- 70
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
T ++G D L + + L + + + +PD C++
Sbjct: 71 TNQHGYLYAAD-----------DPLTGKRWPQMPPLFRELAAEAAAASGYARFTPDACLI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
N Y +L LHQD+DE +L+ P+VS S+G A F +G R + ++VLLE GDV
Sbjct: 120 NRYQPGTKLSLHQDKDEQ--NLRA--PIVSVSLGLPAIFQFGGLRRNDPLQRVLLEHGDV 175
Query: 415 LIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFR 456
+++GGESR +HG+ + P GA R NLTFR
Sbjct: 176 VVWGGESRLFYHGIQPLKEGIHPATGAC---------RYNLTFR 210
>gi|311741167|ref|ZP_07714992.1| alkylated DNA repair protein [Corynebacterium pseudogenitalium ATCC
33035]
gi|311303969|gb|EFQ80047.1| alkylated DNA repair protein [Corynebacterium pseudogenitalium ATCC
33035]
Length = 229
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 22/225 (9%)
Query: 238 PGMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDP 293
PG+ + ++ + +Q +V I +E P +P G ++ + + LG W
Sbjct: 15 PGVGHVPAWVGVDKQKALVEEMRGIAREYANTPMAMVRPRLKSGGQMSVFQLHLGRYW-- 72
Query: 294 QTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
Y R VD E + +P + L Q + A ++ +E + P++ +
Sbjct: 73 ---HYPSYRYVDNMEGTRVPPVPESLRQIAPGALRAAAEV---APELEPWVDTFVPEMAL 126
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYG-DERDANKAEKVLLESG 412
VN+Y +G+ D E + PV+S S+GD A F G E + + L SG
Sbjct: 127 VNYYPPGSAMGMRVDDSE-----ESPAPVISLSIGDEALFRMGHTEARTRPWDDITLCSG 181
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
D+++FGG R +HGV +N G L E LR GR+N+T RQ
Sbjct: 182 DLVVFGGPKRFAYHGVVRVN----DGTLPEGCGLREGRINITIRQ 222
>gi|303279975|ref|XP_003059280.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459116|gb|EEH56412.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 167
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 77/146 (52%), Gaps = 11/146 (7%)
Query: 312 IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDE 371
PS ++V + A A DSK + +P + P +VNFY R H+D ++
Sbjct: 4 FPSRLHEIVLECVRAAQA---ADSKRN-----VPDMRPTTALVNFYKEGARFKWHRDSED 55
Query: 372 SRYS-LKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSS 430
+ + G P+VSF+VG SA+F Y + + V L SGDVL+FGG +R + H V+
Sbjct: 56 PEVARVDAGPPIVSFTVGLSADFAYKRRFEDETHDVVRLNSGDVLLFGGPARMIVHSVTR 115
Query: 431 INPNSAPGALLENTMLRPGRLNLTFR 456
+ P + P +L ML GRLN+T R
Sbjct: 116 VVPRTMP-PMLRGRMLH-GRLNVTVR 139
>gi|386396702|ref|ZP_10081480.1| alkylated DNA repair protein [Bradyrhizobium sp. WSM1253]
gi|385737328|gb|EIG57524.1| alkylated DNA repair protein [Bradyrhizobium sp. WSM1253]
Length = 216
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 64/111 (57%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C+VN Y RL LHQD+DE YS P+VS S+G A FL+G +K +
Sbjct: 115 FAPDACLVNRYEPGTRLSLHQDKDELDYSA----PIVSVSLGLPATFLFGGMARNDKPRR 170
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG SR +HGV AP A E+ +L R+NLTFR+
Sbjct: 171 FRLVHGDVVVWGGPSRLAYHGV-------APLADGEHALLGRTRVNLTFRR 214
>gi|163857244|ref|YP_001631542.1| hypothetical protein Bpet2932 [Bordetella petrii DSM 12804]
gi|163260972|emb|CAP43274.1| alkB [Bordetella petrii]
Length = 216
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y R+ LHQD++E +S P+VS S+G +A FL+G R + A +V
Sbjct: 117 PDACLVNRYAPGARMSLHQDKNERDFSA----PIVSVSLGIAAVFLFGGSRRGDSARRVP 172
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+ GDV+++GG R +HGV + + P L R+NLTFRQ
Sbjct: 173 LQHGDVVVWGGPDRLRYHGVLPLKDATHP-------RLGAARVNLTFRQ 214
>gi|251790831|ref|YP_003005552.1| 2OG-Fe(II) oxygenase [Dickeya zeae Ech1591]
gi|247539452|gb|ACT08073.1| 2OG-Fe(II) oxygenase [Dickeya zeae Ech1591]
Length = 217
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D +Y + + G +P+ F +L Q + EA
Sbjct: 67 CGPLGWVSDEHGYRYSAQDPLTGEPWPAMPTCFLRLSQAAAREAG--------------- 111
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
SPD C++N Y +L LHQDRDE L++ P+VS S+G A FL+G + ++
Sbjct: 112 YDGFSPDACLINRYAVGAKLSLHQDRDEQ--DLRQ--PIVSVSLGLGAVFLFGGRKRSDP 167
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++ L GDV+++GG SR +H + + P L E RLNLTFR+
Sbjct: 168 CRRLALMHGDVVVWGGASRLNYHAILPLKRGPLPAGLSEAV-----RLNLTFRK 216
>gi|423124952|ref|ZP_17112631.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5250]
gi|376400397|gb|EHT13010.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5250]
Length = 216
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 103/228 (45%), Gaps = 39/228 (17%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG ++L+ Y R L+ I + P F Q G + + M C L W
Sbjct: 15 LAPGAIILRRYARERAPALLQAIAGIADRSP--FRQMVTPGGYTMSVAMTNCGELGWT-- 70
Query: 295 TRKYGKKRQVD----GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPD 350
T +YG D G +P F++L + + A +PD
Sbjct: 71 TNQYGYLYAADDPLTGKRWPQMPPPFRELAAEAAAAAGYA---------------RFTPD 115
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLE 410
C++N Y +L LHQD+DE ++L+ P+VS S+G A F +G R + ++VLLE
Sbjct: 116 ACLINRYQPGAKLSLHQDKDE--HNLRA--PIVSVSLGLPAIFQFGGLRRNDPLQRVLLE 171
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFR 456
GDV+++GGESR +HG+ + P GA R NLTFR
Sbjct: 172 HGDVVVWGGESRLFYHGIQPLKEGIHPETGAC---------RYNLTFR 210
>gi|366158426|ref|ZP_09458288.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia sp.
TW09308]
Length = 216
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 79/166 (47%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F+ L QR+ + A P PD
Sbjct: 82 DPQTNK----------PWPAMPQGFRDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYVPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ S+ P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQSLKAGFHP-------LTADCRYNLTFRQ 211
>gi|424916186|ref|ZP_18339550.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392852362|gb|EJB04883.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 205
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C++NFY+ R+GLHQD+DE PVVS S+G+S F G ++
Sbjct: 102 PEACLINFYSDDARMGLHQDKDERDLQA----PVVSISLGNSCLFRVGGLSRNDRTLSFK 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+++ GGE R FHGV I+P ++ LL+N GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|349699624|ref|ZP_08901253.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Gluconacetobacter
europaeus LMG 18494]
Length = 223
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 32/226 (14%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGL-DW-- 291
+L PG +L+ + ++ ++ I + P F + G + + M C G W
Sbjct: 20 VLDPGAAVLRGHAAMQAADMLAGIRRIARLSP--FRRMTTAGGGTMSVAMTCCGAAGWCS 77
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
D + +Y + G +P ++ ++A L D V PD
Sbjct: 78 DARGHRYEPHDPLTGQPWPALPPAWRAWA----TDAARLAGHDGFV-----------PDT 122
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y R+GLHQD DE + PVVS S G A F +G + + ++ L
Sbjct: 123 CLINGYRPGARMGLHQDDDE-----RTDAPVVSVSFGLPAMFQWGGLQRTDPVRRIPLLH 177
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GG SR VFHG++++ P + P R NLTFR+
Sbjct: 178 GDVVVWGGPSRLVFHGIAALRAGQHP-------VTGPCRYNLTFRR 216
>gi|424889292|ref|ZP_18312895.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393174841|gb|EJC74885.1| alkylated DNA repair protein [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 205
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C++NFY+ R+GLHQD+DE PVVS S+G+S F G + +
Sbjct: 102 PEACLINFYSDDARMGLHQDKDERDLQA----PVVSISLGNSCLFRIGGLNRNDPTLSLK 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+++ GGE R FHGV I+P ++ LL+N GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|389774867|ref|ZP_10192986.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodanobacter
spathiphylli B39]
gi|388438466|gb|EIL95221.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhodanobacter
spathiphylli B39]
Length = 217
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 64/109 (58%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y RL LHQDRDE + G P+VS S+G A FL+G ++ ++ A +V
Sbjct: 118 PDACLINRYEPGTRLSLHQDRDERDF----GQPIVSVSLGIPAIFLFGGDQRSDAAMRVP 173
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG +R HGV + PN + L R+NLTFR+
Sbjct: 174 LAHGDVVVWGGPARLRHHGVLPLKPN-------HHEALGECRINLTFRR 215
>gi|418041880|ref|ZP_12680094.1| alkylated DNA repair protein AlkB [Escherichia coli W26]
gi|383475283|gb|EID67248.1| alkylated DNA repair protein AlkB [Escherichia coli W26]
Length = 216
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 76/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPWP----------AMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y S +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPSAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|209551543|ref|YP_002283460.1| 2OG-Fe(II) oxygenase [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209537299|gb|ACI57234.1| 2OG-Fe(II) oxygenase [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 205
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C++NFY+ R+GLHQD+DE PVVS S+G+S F G ++
Sbjct: 102 PEACLINFYSDDARMGLHQDKDERDLQA----PVVSISLGNSCLFRVGGLSRNDRTLSFK 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+++ GGE R FHGV I+P ++ LL+N GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|91790697|ref|YP_551649.1| DNA-N1-methyladenine dioxygenase [Polaromonas sp. JS666]
gi|91699922|gb|ABE46751.1| DNA-N1-methyladenine dioxygenase [Polaromonas sp. JS666]
Length = 217
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 61/108 (56%), Gaps = 11/108 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y RL LHQD+DE S P+VS S+G A FL+G R ++ +
Sbjct: 118 PDACLVNCYEPGARLSLHQDKDEGDMSA----PIVSVSLGLPAVFLFGTTRRKDRPARYR 173
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L GDV ++GG SR +HGV AP A E+ +L R+NLTFR
Sbjct: 174 LVHGDVAVWGGPSRLAYHGV-------APLAAGEHALLGRQRINLTFR 214
>gi|421747748|ref|ZP_16185427.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cupriavidus necator
HPC(L)]
gi|409773600|gb|EKN55365.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cupriavidus necator
HPC(L)]
Length = 221
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 102/229 (44%), Gaps = 43/229 (18%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQTR 296
PG V+L+ + R L I Q P F G ++ + M C L W R
Sbjct: 25 PGAVVLRGFALSRATALREAIEQVQADAP--FRHLITPGGFRMSVAMTNCGTLGWVSDER 82
Query: 297 KYGKKRQVDGCEPS------VIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPD 350
Y + D +P +P F +L + + + A P +PD
Sbjct: 83 GY----RYDPIDPDSGRRWPAMPDVFTELAREAAAAAG---------------YPGFAPD 123
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLE 410
C++N Y RL LHQDR+E L+ P+VS S+G A FL+G + A++ +V L
Sbjct: 124 ACLINRYTPGTRLSLHQDRNER--DLRA--PIVSVSLGLPAVFLFGGAKRADRPARVRLA 179
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFRQ 457
GD+ ++GG SR +HG++ + P GAL RLNLTFR+
Sbjct: 180 HGDIAVWGGPSRLFYHGIAPLAEGDHPLTGAL---------RLNLTFRK 219
>gi|365137349|ref|ZP_09344068.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella sp.
4_1_44FAA]
gi|363656213|gb|EHL94983.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella sp.
4_1_44FAA]
Length = 217
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG V+L+ + R +L+ I + P F Q G + + M C L W
Sbjct: 15 LAPGAVVLRRFARERAPVLLQAIADVASQSP--FRQMVTPGGYTMSVAMTNCGALGWTTD 72
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+ Y + + + ++ A+ + + P SPD C++
Sbjct: 73 RQGY-------------LYAPVDPVTDQTWPPMPAVFHELALAAAAAGGYPEFSPDACLI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
N Y +L LHQD+DE L+ P+VS S+G A F +G + ++ +++LLE GDV
Sbjct: 120 NRYCPGAKLSLHQDKDEQ--DLRA--PIVSVSLGLPAIFQFGGLQRSDPLQRLLLEHGDV 175
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++GGESR +HG+ + P E R NLTFRQ
Sbjct: 176 VVWGGESRLFYHGIQPLKAGHHP----ETGDC---RYNLTFRQ 211
>gi|253999981|ref|YP_003052044.1| 2OG-Fe(II) oxygenase [Methylovorus glucosetrophus SIP3-4]
gi|253986660|gb|ACT51517.1| 2OG-Fe(II) oxygenase [Methylovorus glucosetrophus SIP3-4]
Length = 212
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 74/147 (50%), Gaps = 26/147 (17%)
Query: 311 VIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRD 370
+P +QL +EA AL D + PD C++N Y R+ LHQD++
Sbjct: 90 AMPPAMQQLA----TEAAALCGFDGFL-----------PDACLINRYAPGTRMSLHQDKN 134
Query: 371 ESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSS 430
E YS P+VS S+G SA F G + ++K ++ L+ GDVL++G E R FHGV
Sbjct: 135 EVDYSA----PIVSVSLGVSAVFQLGGMQRSDKTSRISLQHGDVLVWGDEDRLRFHGVLP 190
Query: 431 INPNSAPGALLENTMLRPGRLNLTFRQ 457
I P P + R+NLTFR+
Sbjct: 191 IKPQQHP-------LTGEDRINLTFRK 210
>gi|145350946|ref|XP_001419853.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580085|gb|ABO98146.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 348
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 21/222 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG+V L+ +L++ Q+ + LG + G +D A+ + +G D +
Sbjct: 119 LGPGLVCLRKFLSVEAQMWLASESFALG-------ESGSDDAARGQGFFAKMG-DGTFKL 170
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+ + R + EP P L Q A D+++ ++P C+VN
Sbjct: 171 NQGSRGRMI--LEPDAFPDGI--LTQMCEDAVAAACAADAEMPT------NMNPTTCLVN 220
Query: 356 FYNTSGRLGLHQDRDESR-YSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
FY H+D ++ + + G P+VSFSVG S +F Y D + + V L SGDV
Sbjct: 221 FYKDGAEFKWHKDSEDPKLVKSRTGPPIVSFSVGLSGDFGYKYSFDDPEHKVVRLNSGDV 280
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L+FGG SR + H V ++ P S PG L ML GRLN+T R
Sbjct: 281 LLFGGPSRMIVHSVLNVYPGSMPGH-LRGKMLN-GRLNVTVR 320
>gi|192290315|ref|YP_001990920.1| 2OG-Fe(II) oxygenase [Rhodopseudomonas palustris TIE-1]
gi|192284064|gb|ACF00445.1| 2OG-Fe(II) oxygenase [Rhodopseudomonas palustris TIE-1]
Length = 216
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 101/232 (43%), Gaps = 31/232 (13%)
Query: 229 DWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CL 287
D R + PG LL + E+ L+ I + + P F G + + M C
Sbjct: 11 DAPRREDIAPGAALLSGFARANERELLAAIDAVVARAP--FRHMMTPGGHTMSVAMTSCG 68
Query: 288 GLDWDPQTRKYG-KKRQVDGCEP-SVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILP 345
+ W R Y D P +P+ + L QR+ ++
Sbjct: 69 SVGWVTDRRGYRYSPNDPDSVTPWPKMPAVLRDLAQRAAADVG---------------FA 113
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
PD C++N Y ++ LHQD+DE+ + P+VS S+G A F +G ++K
Sbjct: 114 GFDPDACLINRYVPGAKMALHQDKDEADFLA----PIVSVSLGLPATFQFGGMARSDKPR 169
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ L GDVL++GG SR V+HGV ++ E+ +L R+NLTFR+
Sbjct: 170 RYELRHGDVLVWGGPSRLVYHGVLTLKDG-------EHPLLGRQRINLTFRK 214
>gi|194434194|ref|ZP_03066461.1| alkylated DNA repair protein AlkB [Shigella dysenteriae 1012]
gi|417671500|ref|ZP_12320989.1| alkylated DNA repair protein AlkB [Shigella dysenteriae 155-74]
gi|194417523|gb|EDX33625.1| alkylated DNA repair protein AlkB [Shigella dysenteriae 1012]
gi|332096126|gb|EGJ01129.1| alkylated DNA repair protein AlkB [Shigella dysenteriae 155-74]
Length = 216
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 76/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNK----------PWPAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDE----LDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|91978060|ref|YP_570719.1| 2OG-Fe(II) oxygenase [Rhodopseudomonas palustris BisB5]
gi|91684516|gb|ABE40818.1| DNA-N1-methyladenine dioxygenase [Rhodopseudomonas palustris BisB5]
Length = 217
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y R+ LHQDRDE +S P+VS S+G A F +G ++K +
Sbjct: 118 PDACLINRYAPGARMALHQDRDEQDFSA----PIVSVSLGLPAIFQFGGMARSDKPRRFE 173
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDVL++GGESR V+HGV ++ ++ +L R+NLTFR+
Sbjct: 174 LRHGDVLVWGGESRLVYHGVLALKDG-------DHQLLGRQRINLTFRK 215
>gi|86355707|ref|YP_467599.1| alkylated DNA repair protein [Rhizobium etli CFN 42]
gi|86279809|gb|ABC88872.1| alkylated DNA repair protein [Rhizobium etli CFN 42]
Length = 203
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY+ R+GLHQD+DE PVVS S+G+S F G ++
Sbjct: 102 PEACLVNFYSDDARMGLHQDKDEQDLQA----PVVSISLGNSCRFRIGGLNRNDRTLSFK 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+++ GGE R +HGV I P ++ LL+N GR+NLT R+
Sbjct: 158 LASGDLVVLGGEGRLCYHGVDRIYPATS--TLLKNG----GRINLTLRR 200
>gi|440795550|gb|ELR16670.1| hypothetical protein ACA1_089180 [Acanthamoeba castellanii str.
Neff]
Length = 212
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 16/147 (10%)
Query: 313 PSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPAL-SPDICIVNFYNTSGRLGLHQDRDE 371
P +F + Q + AH + ++V P L P+ C +N+Y SG++G H DR
Sbjct: 75 PPQFTAVAQELVRIAH------ERCASV----PCLDEPNTCRINYYTNSGKIGWHYDRVP 124
Query: 372 SRYSLKKGL---PVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGV 428
S ++ PV+S S G+SAEF Y D + E V+LESGDV+IFGG +R ++H V
Sbjct: 125 SLSKEEQRTVTDPVISMSFGNSAEFQYKQRMD-DPEESVILESGDVIIFGGPARMIYHMV 183
Query: 429 SSINPNSAPGALLENTMLRPGRLNLTF 455
+ N+ P L+ PGR N+ +
Sbjct: 184 PRVIKNTTPKG-LDLRQFGPGRFNVGY 209
>gi|437897899|ref|ZP_20849640.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
6.0562-1]
gi|435322268|gb|ELO94575.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
6.0562-1]
Length = 142
Score = 81.6 bits (200), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE P+VS S+G A F +G R ++ +
Sbjct: 37 SFQPDACLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGVPAVFQFGGLRRSDPLQ 92
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 93 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 137
>gi|383773288|ref|YP_005452354.1| alkylated DNA repair protein [Bradyrhizobium sp. S23321]
gi|381361412|dbj|BAL78242.1| alkylated DNA repair protein [Bradyrhizobium sp. S23321]
Length = 217
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+PD C+VN Y RL LHQD+DE YS P+VS S+G A FL+G +K
Sbjct: 115 GFAPDACLVNRYEPGTRLSLHQDKDELDYSA----PIVSVSLGLPATFLFGGMARNDKPR 170
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ L GDV+++GG SR +HGV AP A E+ +L R+NLTFR+
Sbjct: 171 RFRLVHGDVVVWGGASRLAYHGV-------APLADGEHPLLGRKRINLTFRR 215
>gi|168261725|ref|ZP_02683698.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|205349359|gb|EDZ35990.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
Length = 216
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG V+L+ + Q L+ I + + P F Q G + + M C L W D
Sbjct: 15 LAPGAVVLRRFAFRAAQSLLDDIGFVVSQSP--FRQMVTPGGYTMSVAMTNCGALGWTTD 72
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLV-QRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
Y + + +P F + Q +++ +A + PD
Sbjct: 73 RHGYCYAVRDPLTDKPWPALPLSFASVCRQAAIAAGYA----------------SFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPIQRILLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 173 GDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|389872450|ref|YP_006379869.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Advenella
kashmirensis WT001]
gi|388537699|gb|AFK62887.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Advenella
kashmirensis WT001]
Length = 192
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 66/112 (58%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+PD C++N Y RL LHQD+DE+ +S P+VS S+G A F +G + +++ E
Sbjct: 90 GFTPDSCLINRYVPGARLSLHQDKDETDFSA----PIVSVSLGMPAMFQFGGLKRSDRPE 145
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
K+ L GD++++GG R +HGV ++ N P +L R+NLTFR+
Sbjct: 146 KIPLFHGDIVVWGGPDRLRYHGVMALKDNPHP-------LLGSNRINLTFRK 190
>gi|423140890|ref|ZP_17128528.1| putative alkylated DNA repair protein AlkB [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
gi|379053444|gb|EHY71335.1| putative alkylated DNA repair protein AlkB [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
Length = 216
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y T +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYATGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPLQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++ +GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVAWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|417342516|ref|ZP_12123306.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Baildon str. R6-199]
gi|357956542|gb|EHJ81934.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Baildon str. R6-199]
Length = 216
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAAFQFGGLRRSDPIQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|170740259|ref|YP_001768914.1| 2OG-Fe(II) oxygenase [Methylobacterium sp. 4-46]
gi|168194533|gb|ACA16480.1| 2OG-Fe(II) oxygenase [Methylobacterium sp. 4-46]
Length = 228
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 68/134 (50%), Gaps = 16/134 (11%)
Query: 329 ALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVG 388
AL+ S ++ D P+ C+VN Y R+GLHQDRDE PV+S S+G
Sbjct: 99 ALLAAWSDLAAYPD-----PPEACLVNLYAPGARMGLHQDRDEDALDA----PVLSLSLG 149
Query: 389 DSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP 448
+A F +G R + + L SGD L+ GG SR +FHGV I P P LL L
Sbjct: 150 ATALFRHGGPRRGDPTRSLRLRSGDALVIGGASRLIFHGVDRIVPE--PPDLLGAPPLPE 207
Query: 449 -----GRLNLTFRQ 457
GR+NLT R+
Sbjct: 208 PVPPGGRVNLTLRR 221
>gi|421890885|ref|ZP_16321725.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Ralstonia
solanacearum K60-1]
gi|378963752|emb|CCF98473.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Ralstonia
solanacearum K60-1]
Length = 218
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C++N Y RL LHQD+DE Y P+VS S+G A FL+G R +K
Sbjct: 114 FPGFVPDACLINRYVPGARLSLHQDKDEQDYDA----PIVSVSLGIPAVFLWGGHRRTDK 169
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++V L GDV+++GG R +HGV + E+ +L R+NLT R+
Sbjct: 170 TQRVPLFHGDVVVWGGPDRLRYHGVLPLKEA-------EHPLLGAQRINLTLRR 216
>gi|300703170|ref|YP_003744772.1| alpha-ketoglutarate-dependent dioxygenase alkb [Ralstonia
solanacearum CFBP2957]
gi|299070833|emb|CBJ42133.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Ralstonia
solanacearum CFBP2957]
Length = 218
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C++N Y RL LHQD+DE Y P+VS S+G A FL+G R +K
Sbjct: 114 FPGFVPDACLINRYVPGARLSLHQDKDEQDYDA----PIVSVSLGIPAVFLWGGHRRTDK 169
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++V L GDV+++GG R +HGV + E+ +L R+NLT R+
Sbjct: 170 TQRVPLFHGDVVVWGGPDRLRYHGVLPLKEA-------EHPLLGAQRINLTLRR 216
>gi|38232967|ref|NP_938734.1| alkylated DNA repair protein [Corynebacterium diphtheriae NCTC
13129]
gi|376247629|ref|YP_005139573.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
HC04]
gi|376250446|ref|YP_005137327.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
HC03]
gi|376256263|ref|YP_005144154.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
VA01]
gi|38199225|emb|CAE48855.1| Putative alkylated DNA repair protein [Corynebacterium diphtheriae]
gi|372111950|gb|AEX78009.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
HC03]
gi|372114197|gb|AEX80255.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
HC04]
gi|372118780|gb|AEX82514.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
VA01]
Length = 232
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 24/228 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKG----PGGFYQPGYNDGAKLRLRMMCLGLDW 291
+ PG+ L +L + +Q +VR +E+ + P +P G ++ + + LG W
Sbjct: 13 IAPGVAHLPGWLGVDKQAELVREIREIARTYADTPMAMLRPTLKSGGQMSVYQLHLGRYW 72
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
+ +Y K + G +P L ++ A + VE +P ++
Sbjct: 73 HYPSYRYIDK--IAGTTVPPVPDSLAALAPEALRAAAE--VAEELAPWVETFVP----EM 124
Query: 352 CIVNFYNTSGRLGLHQDR-DESRYSLKKGLPVVSFSVGDSAEFLYG-DERDANKAEKVLL 409
+VN+Y R+G+H D +ESR PV+S S+GD A F G E + V L
Sbjct: 125 VLVNYYPPGSRMGMHVDEFEESR------APVISVSIGDEALFRMGHTESRTQPWDDVTL 178
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGD+++FGG R +HGV +N + P + L GR+N+T RQ
Sbjct: 179 CSGDLVVFGGPKRFAYHGVVRVNDATLP----DGCGLEQGRINITIRQ 222
>gi|183599172|ref|ZP_02960665.1| hypothetical protein PROSTU_02628 [Providencia stuartii ATCC 25827]
gi|386745490|ref|YP_006218669.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Providencia
stuartii MRSN 2154]
gi|188021399|gb|EDU59439.1| putative alkylated DNA repair protein AlkB [Providencia stuartii
ATCC 25827]
gi|384482183|gb|AFH95978.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Providencia
stuartii MRSN 2154]
Length = 210
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 64/111 (57%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
SPD C++N Y+ +L LHQD+DE +S P+VSFS+G A F +G
Sbjct: 109 FSPDACLINRYSVGAKLSLHQDKDEMDFSQ----PIVSFSLGLPATFDFGGLTREAPKTA 164
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+LLE GDV+++GG+SR +HGV SI P +L R+N+TFR+
Sbjct: 165 LLLEHGDVVVWGGKSRLNYHGVRSIKAGCHP-------VLGEFRINITFRR 208
>gi|300311009|ref|YP_003775101.1| DNA repair system specific for alkylated DNA repair protein
[Herbaspirillum seropedicae SmR1]
gi|300073794|gb|ADJ63193.1| DNA repair system specific for alkylated DNA repair protein
[Herbaspirillum seropedicae SmR1]
Length = 217
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 65/109 (59%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y ++ LHQDR+E + P+VS S+G A FL+G ++KA+++
Sbjct: 118 PDACLVNRYEPGAKMSLHQDRNE----IDMTQPIVSVSLGLPATFLFGGMERSDKAQRMR 173
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+SGDV+++GG +R FHGV ++ E+ + R NLTFR+
Sbjct: 174 LDSGDVVVWGGPARLAFHGVDTVRQA-------EHPLTGACRYNLTFRR 215
>gi|347541362|ref|YP_004848788.1| 2OG-Fe(II) oxygenase [Pseudogulbenkiania sp. NH8B]
gi|345644541|dbj|BAK78374.1| 2OG-Fe(II) oxygenase [Pseudogulbenkiania sp. NH8B]
Length = 215
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 323 SMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPV 382
+M E+ L+ D+ E P PD C++N Y RL LHQD+DE + P+
Sbjct: 93 AMPESFRLLARDAAA---EAGFPGYEPDACLINRYVPGSRLSLHQDKDER----DQIAPI 145
Query: 383 VSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLE 442
VS S+G A FL+G R +K +++ L GDV+++GG +R +HGV + P
Sbjct: 146 VSVSLGLPALFLFGGLRREDKTQRIPLAHGDVVVWGGPARLRYHGVLPLKEGVHP----- 200
Query: 443 NTMLRPGRLNLTFRQ 457
+L R+NLTFR+
Sbjct: 201 --LLGEQRINLTFRK 213
>gi|432869580|ref|ZP_20090173.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE147]
gi|431410166|gb|ELG93328.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE147]
Length = 216
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------FPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|417350216|ref|ZP_12128659.1| Methylated-DNA-protein-cysteine methyltransferase, partial
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|353570709|gb|EHC34897.1| Methylated-DNA-protein-cysteine methyltransferase, partial
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
Length = 123
Score = 81.6 bits (200), Expect = 8e-13, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE P+VS S+G A F +G R ++ +
Sbjct: 18 SFQPDACLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGVPAIFQFGGLRRSDPLQ 73
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 74 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 118
>gi|386332552|ref|YP_006028721.1| alpha-ketoglutarate-dependent dioxygenase alkb [Ralstonia
solanacearum Po82]
gi|334195000|gb|AEG68185.1| alpha-ketoglutarate-dependent dioxygenase alkb [Ralstonia
solanacearum Po82]
Length = 218
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C++N Y RL LHQD+DE Y P+VS S+G A FL+G R +K
Sbjct: 114 FPGFVPDACLINRYVPGARLSLHQDKDEQDYDA----PIVSVSLGIPAVFLWGGHRRTDK 169
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++V L GDV+++GG R +HGV + E+ +L R+NLT R+
Sbjct: 170 TQRVPLFHGDVVVWGGPDRLRYHGVLPLKEA-------EHPLLGAQRINLTLRR 216
>gi|419922114|ref|ZP_14440137.1| 2OG-Fe(II) oxygenase [Escherichia coli 541-15]
gi|388396799|gb|EIL57869.1| 2OG-Fe(II) oxygenase [Escherichia coli 541-15]
Length = 216
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+I+GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVIWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|161613019|ref|YP_001586984.1| hypothetical protein SPAB_00726 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161362383|gb|ABX66151.1| hypothetical protein SPAB_00726 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 216
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 33/226 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG V+L+ + Q L+ I + P F Q G + + M C L W D
Sbjct: 15 LAPGAVVLRRFAFRAAQSLLDDIGVVASQSP--FRQMVTPGGYTMSVAMTNCGALGWTTD 72
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLV-QRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
Y + + +P F + Q +++ +A + PD
Sbjct: 73 RHGYCYAVRDPLTDKPWPALPLSFASVCRQAAIAAGYA----------------SFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPIQRILLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 173 GDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|206578796|ref|YP_002237372.1| alkylated DNA repair protein AlkB [Klebsiella pneumoniae 342]
gi|206567854|gb|ACI09630.1| alkylated DNA repair protein AlkB [Klebsiella pneumoniae 342]
Length = 217
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG V+L+ + R L+ I + P F Q G + + M C L W
Sbjct: 15 LAPGAVVLRRFSRERAPALLQAIADVARQSP--FRQMVTPGGYTMSVAMTNCGALGWT-- 70
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
T ++G D +P L ++ A+ + + + P SPD C++
Sbjct: 71 TDRHGYL--YDPVDP---------LTGQTWPPMPAVFRELALAAAAAGGYPNFSPDACLI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
N Y +L LHQD+DE L+ P+VS S+G A F +G + ++ +++LLE GDV
Sbjct: 120 NRYQPGAKLSLHQDKDEQ--DLRA--PIVSVSLGLPAIFQFGGLQRSDPLQRLLLEHGDV 175
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++GGESR +HG+ + P E R NLTFRQ
Sbjct: 176 VVWGGESRLFYHGIQPLKAGHHP----ETGDC---RYNLTFRQ 211
>gi|91775654|ref|YP_545410.1| DNA-N1-methyladenine dioxygenase [Methylobacillus flagellatus KT]
gi|91709641|gb|ABE49569.1| DNA-N1-methyladenine dioxygenase [Methylobacillus flagellatus KT]
Length = 241
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 11/108 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y T +L LHQD+DE +S P+VS S+G +A FL+G R ++ +
Sbjct: 142 PDACLINRYQTGAKLSLHQDKDEQDFSQ----PIVSVSLGLAATFLFGGLRRSDPVLRTE 197
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L GDV+++GG++R +HG+ + P E+ + R+NLTFR
Sbjct: 198 LNHGDVVVWGGQARLRYHGILPLKPG-------EHPLTGDVRINLTFR 238
>gi|422334305|ref|ZP_16415312.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
4_1_47FAA]
gi|373244692|gb|EHP64172.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
4_1_47FAA]
Length = 229
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNK----------PWPAMPQSFHHLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|417122221|ref|ZP_11971479.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0246]
gi|386147501|gb|EIG93941.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0246]
Length = 216
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+I+GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVIWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|359800116|ref|ZP_09302667.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Achromobacter
arsenitoxydans SY8]
gi|359361914|gb|EHK63660.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Achromobacter
arsenitoxydans SY8]
Length = 219
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 84/175 (48%), Gaps = 30/175 (17%)
Query: 286 CLGLDWDPQTRKYGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVED 342
C GL W R Y + ++D G +P F +L + +EA
Sbjct: 70 CGGLGWTTDARGY-RYSRIDPQSGQPWPAMPQSFLRLAADAAAEAG-------------- 114
Query: 343 ILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDAN 402
P +PD C+VN Y RL LHQDR+E Y+ P+VS S+G A FL+G + A+
Sbjct: 115 -FPGFAPDACLVNRYEPGSRLSLHQDRNERDYAA----PIVSVSLGMPAMFLFGGDARAD 169
Query: 403 KAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+AE+V L GDV+++GG R +HGV + L + L R+N T R+
Sbjct: 170 RAERVPLFHGDVVVWGGVDRLRYHGVMPLQD-------LPHPQLGSVRINFTIRK 217
>gi|417629479|ref|ZP_12279716.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_MHI813]
gi|345372226|gb|EGX04190.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_MHI813]
Length = 215
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 81 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 115
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 116 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 171
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+I+GGESR +HG+ + P + R NLTFRQ
Sbjct: 172 GDVVIWGGESRLFYHGIQPLKARFHP-------LTTDCRYNLTFRQ 210
>gi|193068152|ref|ZP_03049116.1| alkylated DNA repair protein AlkB [Escherichia coli E110019]
gi|300918863|ref|ZP_07135429.1| alkylated DNA repair protein AlkB [Escherichia coli MS 115-1]
gi|432675329|ref|ZP_19910788.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE142]
gi|192958431|gb|EDV88870.1| alkylated DNA repair protein AlkB [Escherichia coli E110019]
gi|300414003|gb|EFJ97313.1| alkylated DNA repair protein AlkB [Escherichia coli MS 115-1]
gi|431213864|gb|ELF11719.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE142]
Length = 216
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPWP----------AMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+I+GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVIWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|423109400|ref|ZP_17097095.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5243]
gi|376382134|gb|EHS94868.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
10-5243]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 227 TVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM- 285
T W + L PG ++L+ Y R L+ I + P F Q G + + M
Sbjct: 8 TPPWQEQ--LAPGAIILRRYARERAPALLQAITDIAHRSP--FRQMVTPGGYTMSVAMTN 63
Query: 286 CLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILP 345
C L W R Y + + L ++ + L + + +
Sbjct: 64 CGELGWTTNARGY-------------LYASDDPLTEKRWPQMPPLFRELASEAAAAGGYA 110
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 111 HFTPDACLINRYQPGTKLSLHQDKDER--DLRA--PIVSVSLGLPAIFQFGGLRRSDPLQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+VLLE GDV+++GGESR +HG+ + P R NLTFR
Sbjct: 167 RVLLEHGDVVVWGGESRLFYHGIQPLKEGVHPDT-------GSCRYNLTFR 210
>gi|397164692|ref|ZP_10488147.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
radicincitans DSM 16656]
gi|396093840|gb|EJI91395.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
radicincitans DSM 16656]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 53/236 (22%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGP-GGFYQPGYNDGAKLRLRMM-CLGLDW-- 291
L PG V+L+ + + L+ I Q +G+ P PG G + + M C L W
Sbjct: 15 LAPGAVVLRRFALPHVEALMRGIAQVVGQSPLRHMVTPG---GYTMSVAMTNCGRLGWTT 71
Query: 292 ----------DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
DPQT + + +P+ F L ++ ++
Sbjct: 72 NQHGYLYAPVDPQTAQPWPE----------MPAAFTALCHKA---------------SIA 106
Query: 342 DILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDA 401
P PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G +
Sbjct: 107 AGYPEFRPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRN 162
Query: 402 NKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ ++++LE GD++++GGESR +HG++ + P + R NLTFRQ
Sbjct: 163 DPLQRLMLEHGDIVVWGGESRLFYHGIAPLKAGYHP-------VTGECRYNLTFRQ 211
>gi|419803835|ref|ZP_14329002.1| alkylated DNA repair protein AlkB [Escherichia coli AI27]
gi|384473234|gb|EIE57278.1| alkylated DNA repair protein AlkB [Escherichia coli AI27]
Length = 215
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 81 DPQTNK----------PWPAMPQSFHDLCQRATTAAG---------------YPDFQPDA 115
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 116 CLINRYAAGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 171
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 172 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 210
>gi|207857684|ref|YP_002244335.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|421357528|ref|ZP_15807839.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|421361688|ref|ZP_15811947.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639016-6]
gi|421367246|ref|ZP_15817440.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 640631]
gi|421371414|ref|ZP_15821573.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-0424]
gi|421375476|ref|ZP_15825588.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|421379369|ref|ZP_15829438.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|421384398|ref|ZP_15834423.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|421388512|ref|ZP_15838502.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|421392955|ref|ZP_15842904.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|421397758|ref|ZP_15847670.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|421401995|ref|ZP_15851860.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|421407008|ref|ZP_15856817.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|421411541|ref|ZP_15861306.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-1427]
gi|421418361|ref|ZP_15868063.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|421419800|ref|ZP_15869484.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|421424552|ref|ZP_15874194.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|421430563|ref|ZP_15880150.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|421433997|ref|ZP_15883548.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|421441625|ref|ZP_15891091.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 6-18]
gi|421444375|ref|ZP_15893806.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|421447214|ref|ZP_15896616.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|436619918|ref|ZP_20514564.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
gi|436684734|ref|ZP_20517884.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|436795661|ref|ZP_20522434.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS44]
gi|436808416|ref|ZP_20527840.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436817406|ref|ZP_20534488.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436830637|ref|ZP_20535379.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436849175|ref|ZP_20540344.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436856771|ref|ZP_20545693.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436862610|ref|ZP_20549293.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436872257|ref|ZP_20555279.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436880064|ref|ZP_20559898.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436889117|ref|ZP_20565038.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436897296|ref|ZP_20569943.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436900878|ref|ZP_20571802.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436909665|ref|ZP_20576389.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436917417|ref|ZP_20580951.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436927996|ref|ZP_20587490.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436933947|ref|ZP_20590102.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436942332|ref|ZP_20595315.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436948635|ref|ZP_20598848.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436957273|ref|ZP_20602941.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436968377|ref|ZP_20607786.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436986324|ref|ZP_20615414.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436990898|ref|ZP_20617195.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437004221|ref|ZP_20621950.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437014528|ref|ZP_20625606.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437026879|ref|ZP_20629890.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437045095|ref|ZP_20637530.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437048494|ref|ZP_20639533.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437060932|ref|ZP_20646759.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437067994|ref|ZP_20650626.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437075303|ref|ZP_20653757.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437080569|ref|ZP_20657173.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437091084|ref|ZP_20663075.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|437102688|ref|ZP_20666716.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|437119890|ref|ZP_20671108.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-16]
gi|437127902|ref|ZP_20674992.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-19]
gi|437135864|ref|ZP_20679510.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|437143355|ref|ZP_20684222.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|437154825|ref|ZP_20691285.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|437157949|ref|ZP_20692903.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE15-1]
gi|437167883|ref|ZP_20699081.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|437174004|ref|ZP_20702075.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|437183682|ref|ZP_20707837.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|437258364|ref|ZP_20716401.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|437266853|ref|ZP_20720937.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|437282303|ref|ZP_20729178.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|437298020|ref|ZP_20732929.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|437313664|ref|ZP_20736832.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|437324694|ref|ZP_20739806.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|437336948|ref|ZP_20743157.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|437364261|ref|ZP_20748577.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|437408596|ref|ZP_20752481.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 22-17]
gi|437434403|ref|ZP_20756342.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|437459492|ref|ZP_20761171.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|437472678|ref|ZP_20765682.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|437497529|ref|ZP_20773517.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|437515017|ref|ZP_20777900.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|437532381|ref|ZP_20780888.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|437549341|ref|ZP_20783337.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648900 1-16]
gi|437573249|ref|ZP_20789525.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 1-17]
gi|437591542|ref|ZP_20794822.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 39-2]
gi|437600871|ref|ZP_20797407.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648902 6-8]
gi|437615336|ref|ZP_20802158.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648903 1-6]
gi|437643435|ref|ZP_20808422.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648904 3-6]
gi|437660391|ref|ZP_20812463.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 653049 13-19]
gi|437670021|ref|ZP_20815576.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|437700533|ref|ZP_20823891.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|437709637|ref|ZP_20826224.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|437733664|ref|ZP_20832055.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 16-16]
gi|437804758|ref|ZP_20839086.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|438028891|ref|ZP_20855228.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|438090500|ref|ZP_20860596.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|438098246|ref|ZP_20862654.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|438111585|ref|ZP_20868386.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|445178239|ref|ZP_21397908.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
gi|445191000|ref|ZP_21399723.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 20037]
gi|445233935|ref|ZP_21406547.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE10]
gi|445277202|ref|ZP_21410663.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
gi|445335575|ref|ZP_21415470.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 18569]
gi|445344837|ref|ZP_21417873.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13-1]
gi|445363996|ref|ZP_21424835.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. PT23]
gi|206709487|emb|CAR33831.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|395988058|gb|EJH97219.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 640631]
gi|395991590|gb|EJI00714.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|395992691|gb|EJI01803.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639016-6]
gi|396004091|gb|EJI13075.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-0424]
gi|396004391|gb|EJI13373.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|396006668|gb|EJI15630.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|396019386|gb|EJI28242.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|396019855|gb|EJI28706.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|396020423|gb|EJI29268.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|396031571|gb|EJI40297.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|396033205|gb|EJI41920.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|396033522|gb|EJI42229.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|396038362|gb|EJI47001.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|396045907|gb|EJI54498.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-1427]
gi|396047211|gb|EJI55787.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|396055611|gb|EJI64096.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|396060093|gb|EJI68540.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|396060982|gb|EJI69418.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|396063380|gb|EJI71774.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 6-18]
gi|396067860|gb|EJI76217.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|396075047|gb|EJI83323.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|434962281|gb|ELL55502.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS44]
gi|434964893|gb|ELL57860.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
gi|434967434|gb|ELL60250.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434971855|gb|ELL64358.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434983379|gb|ELL75175.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434989030|gb|ELL80603.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434990782|gb|ELL82312.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434998859|gb|ELL90073.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435000176|gb|ELL91324.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435004720|gb|ELL95670.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|435006368|gb|ELL97269.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435008143|gb|ELL98969.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435014423|gb|ELM05000.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435021459|gb|ELM11827.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435029089|gb|ELM19149.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435031865|gb|ELM21820.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435035038|gb|ELM24886.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435042175|gb|ELM31907.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435044353|gb|ELM34050.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435055506|gb|ELM44918.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435056928|gb|ELM46298.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435060689|gb|ELM49936.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435061550|gb|ELM50773.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435069395|gb|ELM58397.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435072963|gb|ELM61868.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435080323|gb|ELM69004.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435085056|gb|ELM73611.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435086025|gb|ELM74570.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435090212|gb|ELM78616.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435095601|gb|ELM83896.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435098927|gb|ELM87156.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435106110|gb|ELM94129.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435113232|gb|ELN01081.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435113400|gb|ELN01248.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|435122779|gb|ELN10292.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|435128489|gb|ELN15826.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-16]
gi|435129485|gb|ELN16781.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-19]
gi|435137653|gb|ELN24693.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|435138831|gb|ELN25846.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|435140209|gb|ELN27172.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|435150861|gb|ELN37525.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|435153129|gb|ELN39744.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE15-1]
gi|435158236|gb|ELN44647.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|435162219|gb|ELN48405.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|435166693|gb|ELN52666.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|435167865|gb|ELN53720.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|435176706|gb|ELN62073.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|435178896|gb|ELN64071.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|435181895|gb|ELN66929.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|435193807|gb|ELN78280.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|435197297|gb|ELN81589.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|435204849|gb|ELN88506.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 22-17]
gi|435208867|gb|ELN92254.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|435214085|gb|ELN96931.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|435222292|gb|ELO04414.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|435225186|gb|ELO07096.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|435225979|gb|ELO07577.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|435229269|gb|ELO10647.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|435243095|gb|ELO23391.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|435246837|gb|ELO26826.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648900 1-16]
gi|435246964|gb|ELO26952.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 1-17]
gi|435254418|gb|ELO33813.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 39-2]
gi|435261996|gb|ELO41140.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648902 6-8]
gi|435262667|gb|ELO41752.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648903 1-6]
gi|435268958|gb|ELO47511.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 653049 13-19]
gi|435273767|gb|ELO51992.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|435274618|gb|ELO52719.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648904 3-6]
gi|435281782|gb|ELO59433.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|435286993|gb|ELO64217.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 16-16]
gi|435289532|gb|ELO66491.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|435302561|gb|ELO78519.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|435316354|gb|ELO89509.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|435326455|gb|ELO98267.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|435328186|gb|ELO99784.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|435330821|gb|ELP02062.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|444855204|gb|ELX80254.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
gi|444860950|gb|ELX85848.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE10]
gi|444868240|gb|ELX92885.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 20037]
gi|444874464|gb|ELX98710.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 18569]
gi|444879853|gb|ELY03943.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13-1]
gi|444883395|gb|ELY07281.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. PT23]
gi|444887091|gb|ELY10818.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 33/226 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG V+L+ + Q L+ I + P F Q G + + M C L W D
Sbjct: 15 LAPGAVVLRRFAFRAAQSLLDDIGFVASQSP--FRQMVTPGGYTMSVAMTNCSALGWTTD 72
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLV-QRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
Y + + +P F + Q +++ +A + PD
Sbjct: 73 RHGYCYAVRDPLTDKPWPALPLSFASVCRQAAIAAGYA----------------SFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPLQRILLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 173 GDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|417863460|ref|ZP_12508508.1| alkB [Escherichia coli O104:H4 str. C227-11]
gi|341916749|gb|EGT66366.1| alkB [Escherichia coli O104:H4 str. C227-11]
Length = 160
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 26 DPQTNK----------PWPAMPQSFHNLCQRAATAAG---------------YPDFQPDA 60
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 61 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 116
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 117 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 155
>gi|293446562|ref|ZP_06662984.1| alkylated DNA repair protein [Escherichia coli B088]
gi|291323392|gb|EFE62820.1| alkylated DNA repair protein [Escherichia coli B088]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNK----------PWPAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAAGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|420373585|ref|ZP_14873667.1| alkylated DNA repair protein AlkB [Shigella flexneri 1235-66]
gi|391317099|gb|EIQ74465.1| alkylated DNA repair protein AlkB [Shigella flexneri 1235-66]
Length = 301
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 58 DPQTNK----------PWPAMPQSFHDLCQRAATAAG---------------YPDFQPDA 92
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 93 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 148
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 149 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 187
>gi|415813347|ref|ZP_11505156.1| alkylated DNA repair protein AlkB [Escherichia coli LT-68]
gi|323171888|gb|EFZ57532.1| alkylated DNA repair protein AlkB [Escherichia coli LT-68]
Length = 229
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNK----------PWPAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|300926323|ref|ZP_07142123.1| alkylated DNA repair protein AlkB [Escherichia coli MS 182-1]
gi|301328707|ref|ZP_07221760.1| alkylated DNA repair protein AlkB [Escherichia coli MS 78-1]
gi|417237889|ref|ZP_12035620.1| alkylated DNA repair protein AlkB [Escherichia coli 9.0111]
gi|417597534|ref|ZP_12248175.1| alkylated DNA repair protein AlkB [Escherichia coli 3030-1]
gi|422956415|ref|ZP_16968889.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
H494]
gi|432832242|ref|ZP_20065816.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE135]
gi|450218562|ref|ZP_21895936.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O08]
gi|300417600|gb|EFK00911.1| alkylated DNA repair protein AlkB [Escherichia coli MS 182-1]
gi|300844855|gb|EFK72615.1| alkylated DNA repair protein AlkB [Escherichia coli MS 78-1]
gi|345353522|gb|EGW85754.1| alkylated DNA repair protein AlkB [Escherichia coli 3030-1]
gi|371599950|gb|EHN88728.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
H494]
gi|386213667|gb|EII24092.1| alkylated DNA repair protein AlkB [Escherichia coli 9.0111]
gi|431376212|gb|ELG61535.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE135]
gi|449317622|gb|EMD07707.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O08]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRATTAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAAGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|419063429|ref|ZP_13610157.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3D]
gi|419093275|ref|ZP_13638560.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4C]
gi|377909904|gb|EHU74102.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3D]
gi|377941717|gb|EHV05454.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4C]
Length = 229
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNK----------PWPAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|416259885|ref|ZP_11640126.1| Alkylated DNA repair protein AlkB [Shigella dysenteriae CDC
74-1112]
gi|320177224|gb|EFW52232.1| Alkylated DNA repair protein AlkB [Shigella dysenteriae CDC
74-1112]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPNLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|417702955|ref|ZP_12352066.1| alkylated DNA repair protein AlkB [Shigella flexneri K-218]
gi|417744088|ref|ZP_12392614.1| alkylated DNA repair protein AlkB [Shigella flexneri 2930-71]
gi|332766029|gb|EGJ96239.1| alkylated DNA repair protein AlkB [Shigella flexneri 2930-71]
gi|333001815|gb|EGK21381.1| alkylated DNA repair protein AlkB [Shigella flexneri K-218]
Length = 229
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNK----------PWPAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|365895915|ref|ZP_09434009.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. STM 3843]
gi|365423287|emb|CCE06551.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. STM 3843]
Length = 217
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y ++ LHQDRDE G P+VS S+G A FL+G + ++K ++
Sbjct: 116 FAPDACLINRYEPGAKMSLHQDRDER----NMGAPIVSISLGLPAIFLFGGLKRSDKPQR 171
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+ GDV+++GG +R FHGV P A E+ ++ R+NLTFR+
Sbjct: 172 YRLQHGDVVVWGGPARLAFHGV-------MPLADGEHGLIDRKRINLTFRR 215
>gi|417512118|ref|ZP_12176540.1| Methylated-DNA-protein-cysteine methyltransferase, partial
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
gi|353640863|gb|EHC85736.1| Methylated-DNA-protein-cysteine methyltransferase, partial
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
Length = 115
Score = 81.3 bits (199), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE P+VS S+G A F +G R ++ +
Sbjct: 10 SFQPDACLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGVPAVFQFGGLRRSDPLQ 65
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 66 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 110
>gi|218663391|ref|ZP_03519321.1| alkylated DNA repair protein [Rhizobium etli IE4771]
Length = 251
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY+ R+GLHQD+DE PVVS S+G+S F G ++
Sbjct: 150 PEACLVNFYSDDARMGLHQDKDERNLQA----PVVSISLGNSCLFRVGGLSRNDRTLSFK 205
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+++ GGE R FHGV I + A LL+N GR+NLT R+
Sbjct: 206 LSSGDLVVLGGEGRLCFHGVDRI--HKATSTLLKNG----GRINLTLRR 248
>gi|402489576|ref|ZP_10836370.1| 2OG-Fe(II) oxygenase [Rhizobium sp. CCGE 510]
gi|401811368|gb|EJT03736.1| 2OG-Fe(II) oxygenase [Rhizobium sp. CCGE 510]
Length = 205
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY R+GLHQD+DE PVVS S+G+S F G +
Sbjct: 102 PEACLVNFYADEARMGLHQDKDERDLQA----PVVSISLGNSCLFRVGGLNRNDPTLSFK 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+++ GGE R FHGV I+P ++ LL+N GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRIHPATS--TLLKNG----GRINLTLRR 200
>gi|205353382|ref|YP_002227183.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|375124223|ref|ZP_09769387.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|445128912|ref|ZP_21380523.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
gi|205273163|emb|CAR38124.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|326628473|gb|EGE34816.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|444854567|gb|ELX79628.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 33/226 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG V+L+ + Q L+ I + P F Q G + + M C L W D
Sbjct: 15 LAPGAVVLRRFAFRAAQSLLDDIGFVASQSP--FRQMVTPGGYTMSVAMTNCSALGWATD 72
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLV-QRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
Y + + +P F + Q +++ +A + PD
Sbjct: 73 RHGYCYAVRDPLTDKPWPALPLSFASVCRQAAIAAGYA----------------SFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPLQRILLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 173 GDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|409425979|ref|ZP_11260550.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
HYS]
Length = 218
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD C+VN Y RL LHQDRDE YS P+VS S+G A F +G +++
Sbjct: 117 FQPDACLVNCYQPGNRLSLHQDRDEHDYSQ----PIVSVSLGLPAVFQFGGHSRNAPSQR 172
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ L GDV+++GGE R FHGV + P + P +L R+NLT R+
Sbjct: 173 IGLRHGDVMVWGGEDRLRFHGVLPLKPGNHP-------VLGSRRINLTLRK 216
>gi|421813135|ref|ZP_16248859.1| alkylated DNA repair protein AlkB [Escherichia coli 8.0416]
gi|408601441|gb|EKK75244.1| alkylated DNA repair protein AlkB [Escherichia coli 8.0416]
Length = 216
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGVHP-------LTTDCRYNLTFRQ 211
>gi|152980529|ref|YP_001353534.1| alkylated DNA repair protein [Janthinobacterium sp. Marseille]
gi|151280606|gb|ABR89016.1| alkylated DNA repair protein [Janthinobacterium sp. Marseille]
Length = 259
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 65/109 (59%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C++N Y R+ LHQD+DE + P+VS S+G A F +G +R +KA ++
Sbjct: 160 PNACLINCYEPGARMSLHQDKDEQDFRQ----PIVSVSLGIPAVFQFGGDRREDKAMRIP 215
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+ GDV+++GG +R +HGV ++ P + P + R+NLTFR+
Sbjct: 216 LQHGDVVVWGGTARLRYHGVLALKPATHP-------LFGARRINLTFRK 257
>gi|432617282|ref|ZP_19853397.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE75]
gi|431154223|gb|ELE55045.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE75]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHHLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|422780873|ref|ZP_16833658.1| alkylated DNA repair protein AlkB [Escherichia coli TW10509]
gi|323977591|gb|EGB72677.1| alkylated DNA repair protein AlkB [Escherichia coli TW10509]
Length = 179
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 45 DPQTNK----------PWPAMPQSFHNLCQRAATAAG---------------YPDFQPDA 79
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 80 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 135
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 136 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTADCRYNLTFRQ 174
>gi|331653647|ref|ZP_08354648.1| alkylated DNA repair protein AlkB [Escherichia coli M718]
gi|331048496|gb|EGI20572.1| alkylated DNA repair protein AlkB [Escherichia coli M718]
Length = 217
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 83 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 117
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 118 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 173
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 174 GDVVVWGGESRLFYHGIQPLKAGVHP-------LTTDCRYNLTFRQ 212
>gi|167549745|ref|ZP_02343504.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|168242377|ref|ZP_02667309.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|194450563|ref|YP_002046319.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|386592075|ref|YP_006088475.1| Alkylated DNA repair protein AlkB [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|417374601|ref|ZP_12144310.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Inverness str. R8-3668]
gi|419728397|ref|ZP_14255362.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41579]
gi|419734281|ref|ZP_14261174.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41563]
gi|419737818|ref|ZP_14264588.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41573]
gi|419746292|ref|ZP_14272880.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41566]
gi|419750331|ref|ZP_14276793.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41565]
gi|421570305|ref|ZP_16015997.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|421576266|ref|ZP_16021869.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|421578121|ref|ZP_16023703.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|421585544|ref|ZP_16031041.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|194408867|gb|ACF69086.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|205325457|gb|EDZ13296.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205338631|gb|EDZ25395.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|353599034|gb|EHC55314.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Inverness str. R8-3668]
gi|381297939|gb|EIC39022.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41563]
gi|381299451|gb|EIC40523.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41579]
gi|381302771|gb|EIC43801.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41566]
gi|381303839|gb|EIC44853.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41573]
gi|381307205|gb|EIC48068.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41565]
gi|383799119|gb|AFH46201.1| Alkylated DNA repair protein AlkB [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|402519064|gb|EJW26428.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|402525161|gb|EJW32455.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|402525698|gb|EJW32985.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|402530020|gb|EJW37245.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 33/226 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG V+L+ + Q L+ I + P F Q G + + M C L W D
Sbjct: 15 LAPGAVVLRRFAFRAAQSLLDDIGFVASQSP--FRQMVTPGGYTMSVAMTNCGALGWTTD 72
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLV-QRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
Y + + +P F + Q +++ +A + PD
Sbjct: 73 RHGYCYAVRDPLTDKPWPALPLSFASVCRQAAIAAGYA----------------SFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPIQRILLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 173 GDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|16765592|ref|NP_461207.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|62180838|ref|YP_217255.1| DNA repair system specific for alkylated DNA [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|167992595|ref|ZP_02573692.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|197261936|ref|ZP_03162010.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|200387423|ref|ZP_03214035.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|374982219|ref|ZP_09723541.1| Alkylated DNA repair protein AlkB [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|378445694|ref|YP_005233326.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378450972|ref|YP_005238331.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378700175|ref|YP_005182132.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378984827|ref|YP_005247982.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|378989651|ref|YP_005252815.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379701496|ref|YP_005243224.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383496966|ref|YP_005397655.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|417519375|ref|ZP_12181535.1| Alkylated DNA repair protein AlkB [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|422026550|ref|ZP_16372933.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|427567940|ref|ZP_18932944.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|427588410|ref|ZP_18937740.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|427611809|ref|ZP_18942600.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|427635616|ref|ZP_18947497.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|427656575|ref|ZP_18952263.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|427671392|ref|ZP_18961985.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|20141234|sp|P37462.2|ALKB_SALTY RecName: Full=Alpha-ketoglutarate-dependent dioxygenase AlkB;
AltName: Full=Alkylated DNA repair protein AlkB;
AltName: Full=DNA oxidative demethylase AlkB
gi|16420803|gb|AAL21166.1| DNA repair system specific for alkylated DNA [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|62128471|gb|AAX66174.1| DNA repair system specific for alkylated DNA [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|197240191|gb|EDY22811.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|199604521|gb|EDZ03066.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|205329244|gb|EDZ16008.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261247473|emb|CBG25300.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267994350|gb|ACY89235.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158823|emb|CBW18336.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312913255|dbj|BAJ37229.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|321223036|gb|EFX48107.1| Alkylated DNA repair protein AlkB [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323130595|gb|ADX18025.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|332989198|gb|AEF08181.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|353646795|gb|EHC90108.1| Alkylated DNA repair protein AlkB [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|380463787|gb|AFD59190.1| AlkB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|414017342|gb|EKT01072.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|414032002|gb|EKT15035.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|414032998|gb|EKT15976.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|414036361|gb|EKT19196.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|414046374|gb|EKT28705.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|414047314|gb|EKT29600.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|414059073|gb|EKT40685.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPIQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|331663718|ref|ZP_08364628.1| alkylated DNA repair protein AlkB [Escherichia coli TA143]
gi|432771174|ref|ZP_20005513.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE50]
gi|432962380|ref|ZP_20152033.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE202]
gi|433063674|ref|ZP_20250597.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE125]
gi|331059517|gb|EGI31494.1| alkylated DNA repair protein AlkB [Escherichia coli TA143]
gi|431314871|gb|ELG02803.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE50]
gi|431474171|gb|ELH53993.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE202]
gi|431581668|gb|ELI54115.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE125]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHHLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|197248105|ref|YP_002147221.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|440761656|ref|ZP_20940727.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|440767205|ref|ZP_20946189.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|440773908|ref|ZP_20952797.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|197211808|gb|ACH49205.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|436414271|gb|ELP12202.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|436421001|gb|ELP18853.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|436424638|gb|ELP22406.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPLQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|372489708|ref|YP_005029273.1| alkylated DNA repair protein [Dechlorosoma suillum PS]
gi|359356261|gb|AEV27432.1| alkylated DNA repair protein [Dechlorosoma suillum PS]
Length = 220
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 60/114 (52%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C++N Y RL LHQDRDE +S P+VS S+G A FL G +K
Sbjct: 115 FPGFVPDACLINRYAPGTRLSLHQDRDEEDFSQ----PIVSLSLGLPAVFLLGGASRNDK 170
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
K+ L GDVL++GG R FHGV + + + + P RLNLT R+
Sbjct: 171 TVKIPLLHGDVLVWGGPDRLRFHGVQPVKDGN-------HALTGPCRLNLTLRR 217
>gi|298381361|ref|ZP_06990960.1| alpha-ketoglutarate-dependent dioxygenase alkB [Escherichia coli
FVEC1302]
gi|298278803|gb|EFI20317.1| alpha-ketoglutarate-dependent dioxygenase alkB [Escherichia coli
FVEC1302]
Length = 229
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNK----------PWPAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|422031574|ref|ZP_16377732.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|427551469|ref|ZP_18928224.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|427661818|ref|ZP_18957171.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|414018247|gb|EKT01911.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|414019357|gb|EKT02972.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|414052121|gb|EKT34188.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPIQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|419701048|ref|ZP_14228650.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
SCI-07]
gi|380347794|gb|EIA36080.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
SCI-07]
Length = 229
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNK----------PWPAMPQSFHHLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYVPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKVGGHP-------LTTDCRYNLTFRQ 211
>gi|168229625|ref|ZP_02654683.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|168466042|ref|ZP_02699912.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|168818010|ref|ZP_02830010.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194471668|ref|ZP_03077652.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|238913914|ref|ZP_04657751.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
gi|409250873|ref|YP_006886681.1| Alpha-ketoglutarate-dependent dioxygenase alkB Alkylated DNA repair
protein alkB [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|417359538|ref|ZP_12133889.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Give str. S5-487]
gi|417420133|ref|ZP_12159995.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Mississippi str.
A4-633]
gi|418763711|ref|ZP_13319817.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|418765727|ref|ZP_13321810.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|418770130|ref|ZP_13326155.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|418776362|ref|ZP_13332308.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|418781815|ref|ZP_13337691.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|418785821|ref|ZP_13341648.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|418803231|ref|ZP_13358855.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|419789091|ref|ZP_14314773.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. Levine 1]
gi|437819995|ref|ZP_20843118.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|194458032|gb|EDX46871.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|195631181|gb|EDX49741.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|205335774|gb|EDZ22538.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205344780|gb|EDZ31544.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|320086701|emb|CBY96472.1| Alpha-ketoglutarate-dependent dioxygenase alkB Alkylated DNA repair
protein alkB [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|353589292|gb|EHC48124.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Give str. S5-487]
gi|353619404|gb|EHC69812.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Mississippi str.
A4-633]
gi|392615595|gb|EIW98031.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. Levine 1]
gi|392731404|gb|EIZ88631.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|392738333|gb|EIZ95479.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|392740240|gb|EIZ97366.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|392746052|gb|EJA03071.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|392746073|gb|EJA03091.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|392751062|gb|EJA08019.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|392775841|gb|EJA32532.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|435307290|gb|ELO82467.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPLQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|295687461|ref|YP_003591154.1| 2OG-Fe(II) oxygenase [Caulobacter segnis ATCC 21756]
gi|295429364|gb|ADG08536.1| 2OG-Fe(II) oxygenase [Caulobacter segnis ATCC 21756]
Length = 203
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 59/116 (50%), Gaps = 16/116 (13%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P PD C+VN Y R+GLHQDRDE + PV+S S+GD+A F G +
Sbjct: 99 PETPPDSCLVNLYRGEARMGLHQDRDE----VDPSFPVLSISLGDTAVFRIGGTHRKDPT 154
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSA---PGALLENTMLRPGRLNLTFRQ 457
+ L SGDV G +R FHGV I P S+ PG GR+NLT R+
Sbjct: 155 RSLRLSSGDVCRLSGPARLAFHGVDRILPGSSSLVPGG---------GRINLTLRR 201
>gi|420260000|ref|ZP_14762690.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Yersinia
enterocolitica subsp. enterocolitica WA-314]
gi|404512515|gb|EKA26360.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Yersinia
enterocolitica subsp. enterocolitica WA-314]
Length = 221
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 98/233 (42%), Gaps = 37/233 (15%)
Query: 230 WTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLG 288
W E L PG +L H+ + L+ I P F G ++ + M C
Sbjct: 14 WVEE--LAPGAFVLHHFAQEQASSLLAEITTITTVAP--FRHLITPGGYRMSVAMSNCGS 69
Query: 289 LDWDPQTRKYGKKRQVDG----CEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDIL 344
L W Y + +D C P+ +P F L + +A +
Sbjct: 70 LGWVSDVGGY-RYSSIDPLTELCWPA-MPQSFMSLAVAAAQQAGFV-------------- 113
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
PD C++N Y +L LHQD+DE L P+VS S+G A F +G K
Sbjct: 114 -DFQPDACLINRYEVGAKLSLHQDKDE----LDLRQPIVSVSLGLPAVFQFGGASREAKC 168
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++VLL GDV+++GG SR +HGV I +P A R+NLTFR+
Sbjct: 169 QRVLLSEGDVVVWGGPSRLNYHGVLPIKAGFSPAA-------GAYRINLTFRR 214
>gi|402770874|ref|YP_006590411.1| 2OG-Fe(II) oxygenase [Methylocystis sp. SC2]
gi|401772894|emb|CCJ05760.1| 2OG-Fe(II) oxygenase [Methylocystis sp. SC2]
Length = 207
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VN Y+ + R+GLHQD+DES ++ P++S S G F G R ++ A +
Sbjct: 102 PEACLVNVYDATARMGLHQDKDESDFAA----PILSLSFGADCRFRLGGTRRSDSAMALA 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG-RLNLTFRQ 457
L SGD L+ G +R +HGV I P P LL + + G R+NLT R+
Sbjct: 158 LSSGDALVLSGPARMRYHGVDRILPTLNP--LLPDALAAFGVRVNLTLRR 205
>gi|16761192|ref|NP_456809.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|29141114|ref|NP_804456.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|213161833|ref|ZP_03347543.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213646509|ref|ZP_03376562.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
gi|213852144|ref|ZP_03381676.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi
str. M223]
gi|289830056|ref|ZP_06547505.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|378958746|ref|YP_005216232.1| hypothetical protein STBHUCCB_6410 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|25299732|pir||AF0789 AlkB protein [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16503491|emb|CAD07496.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi]
gi|29136740|gb|AAO68305.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|374352618|gb|AEZ44379.1| hypothetical protein STBHUCCB_6410 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 33/226 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG V+L+ + Q L+ I + P F Q G + + M C L W D
Sbjct: 15 LAPGAVVLRRFAFRAAQSLLDDIGFVASQSP--FRQMVTPGGYTMSVAMTNCGALGWTTD 72
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLV-QRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
Y + + +P F + Q +++ +A + PD
Sbjct: 73 GHGYCYAVRDPLTDKPWPALPLSFASVCRQAAIAAGYA----------------SFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPLQRILLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 173 GDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|421887430|ref|ZP_16318589.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|379982985|emb|CCF90862.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPLQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|351728460|ref|ZP_08946151.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acidovorax radicis
N35]
Length = 217
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 62/108 (57%), Gaps = 11/108 (10%)
Query: 350 DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLL 409
D C+VN Y RL LHQDRDE Y+ P+VS S+G A FL+G + A+KA ++ L
Sbjct: 119 DACLVNRYAPGTRLSLHQDRDEGNYAH----PIVSVSLGIPAVFLWGGAQRADKARRIAL 174
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GG +R FHGV + P + R+NLTFR+
Sbjct: 175 VHGDVVVWGGPARLRFHGVLPLPEGVHP-------LTGAHRINLTFRK 215
>gi|419791427|ref|ZP_14317080.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. Levine 15]
gi|392620647|gb|EIX03014.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. Levine 15]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPLQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|417335023|ref|ZP_12118017.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Alachua str. R6-377]
gi|353572926|gb|EHC36425.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Alachua str. R6-377]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPLQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|417366562|ref|ZP_12138800.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Hvittingfoss str.
A4-620]
gi|353591586|gb|EHC49818.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Hvittingfoss str.
A4-620]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 33/226 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG V+L+ + Q L+ I + P F Q G + + M C L W D
Sbjct: 15 LAPGAVVLRRFAFRAAQSLLDDIGFVASQSP--FRQMVTPGGYTMSVAMTNCGALGWTTD 72
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLV-QRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
Y + + +P F + Q +++ +A + PD
Sbjct: 73 LHGYCYAVRDPLTDKPWPALPLSFASVCRQAAIAAGYA----------------SFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPLQRILLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 173 GDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|432809866|ref|ZP_20043759.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE101]
gi|431362634|gb|ELG49212.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE101]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|416898276|ref|ZP_11927840.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_7v]
gi|417115172|ref|ZP_11966308.1| alkylated DNA repair protein AlkB [Escherichia coli 1.2741]
gi|422799518|ref|ZP_16848017.1| alkylated DNA repair protein AlkB [Escherichia coli M863]
gi|323967653|gb|EGB63065.1| alkylated DNA repair protein AlkB [Escherichia coli M863]
gi|327252480|gb|EGE64139.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_7v]
gi|386140591|gb|EIG81743.1| alkylated DNA repair protein AlkB [Escherichia coli 1.2741]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFKPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|157156371|ref|YP_001463563.1| alkylated DNA repair protein AlkB [Escherichia coli E24377A]
gi|191165393|ref|ZP_03027235.1| alkylated DNA repair protein AlkB [Escherichia coli B7A]
gi|218554781|ref|YP_002387694.1| oxidative demethylase [Escherichia coli IAI1]
gi|218695825|ref|YP_002403492.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli 55989]
gi|309793096|ref|ZP_07687524.1| alkylated DNA repair protein AlkB [Escherichia coli MS 145-7]
gi|407470104|ref|YP_006783453.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|407481233|ref|YP_006778382.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 2011C-3493]
gi|410481780|ref|YP_006769326.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|415829090|ref|ZP_11515473.1| alkylated DNA repair protein AlkB [Escherichia coli OK1357]
gi|417133570|ref|ZP_11978355.1| alkylated DNA repair protein AlkB [Escherichia coli 5.0588]
gi|417667634|ref|ZP_12317179.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_O31]
gi|417805779|ref|ZP_12452728.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. LB226692]
gi|417833519|ref|ZP_12479967.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 01-09591]
gi|419345878|ref|ZP_13887253.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13A]
gi|419350293|ref|ZP_13891631.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13B]
gi|419355709|ref|ZP_13896967.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13C]
gi|419360798|ref|ZP_13902016.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13D]
gi|419930918|ref|ZP_14448509.1| 2OG-Fe(II) oxygenase [Escherichia coli 541-1]
gi|422988337|ref|ZP_16979110.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. C227-11]
gi|422995228|ref|ZP_16985992.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. C236-11]
gi|423000303|ref|ZP_16991057.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 09-7901]
gi|423003972|ref|ZP_16994718.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 04-8351]
gi|423010545|ref|ZP_17001279.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-3677]
gi|423019772|ref|ZP_17010481.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4404]
gi|423024939|ref|ZP_17015636.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4522]
gi|423030760|ref|ZP_17021448.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4623]
gi|423038586|ref|ZP_17029260.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423043705|ref|ZP_17034372.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423045434|ref|ZP_17036094.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423053973|ref|ZP_17042780.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423060948|ref|ZP_17049744.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|429719817|ref|ZP_19254748.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429771699|ref|ZP_19303722.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02030]
gi|429781631|ref|ZP_19313560.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429785371|ref|ZP_19317269.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02092]
gi|429791260|ref|ZP_19323117.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02093]
gi|429797087|ref|ZP_19328895.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02281]
gi|429798685|ref|ZP_19330486.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02318]
gi|429807198|ref|ZP_19338925.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02913]
gi|429812098|ref|ZP_19343784.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-03439]
gi|429817618|ref|ZP_19349259.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-04080]
gi|429822829|ref|ZP_19354427.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-03943]
gi|429904209|ref|ZP_19370188.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429908346|ref|ZP_19374310.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429914217|ref|ZP_19380165.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429919248|ref|ZP_19385180.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429925067|ref|ZP_19390981.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429929004|ref|ZP_19394906.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429935543|ref|ZP_19401429.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429941223|ref|ZP_19407097.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429943903|ref|ZP_19409766.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429951503|ref|ZP_19417349.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429954815|ref|ZP_19420647.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec12-0466]
gi|432765609|ref|ZP_20000047.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE48]
gi|157078401|gb|ABV18109.1| alkylated DNA repair protein AlkB [Escherichia coli E24377A]
gi|190904556|gb|EDV64263.1| alkylated DNA repair protein AlkB [Escherichia coli B7A]
gi|218352557|emb|CAU98336.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli 55989]
gi|218361549|emb|CAQ99140.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli IAI1]
gi|308123382|gb|EFO60644.1| alkylated DNA repair protein AlkB [Escherichia coli MS 145-7]
gi|323184163|gb|EFZ69540.1| alkylated DNA repair protein AlkB [Escherichia coli OK1357]
gi|340734401|gb|EGR63531.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 01-09591]
gi|340739691|gb|EGR73923.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. LB226692]
gi|354862063|gb|EHF22501.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. C236-11]
gi|354867348|gb|EHF27770.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. C227-11]
gi|354869419|gb|EHF29829.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 04-8351]
gi|354873274|gb|EHF33651.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 09-7901]
gi|354880028|gb|EHF40364.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-3677]
gi|354889452|gb|EHF49701.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4404]
gi|354893047|gb|EHF53251.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4522]
gi|354895184|gb|EHF55373.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354897458|gb|EHF57616.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4623]
gi|354898819|gb|EHF58970.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354912870|gb|EHF72868.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|354915875|gb|EHF75851.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354917790|gb|EHF77752.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|378186991|gb|EHX47612.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13A]
gi|378200471|gb|EHX60926.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13B]
gi|378201039|gb|EHX61492.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13C]
gi|378203239|gb|EHX63663.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13D]
gi|386151424|gb|EIH02713.1| alkylated DNA repair protein AlkB [Escherichia coli 5.0588]
gi|388399171|gb|EIL59973.1| 2OG-Fe(II) oxygenase [Escherichia coli 541-1]
gi|397784780|gb|EJK95633.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_O31]
gi|406776942|gb|AFS56366.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|407053530|gb|AFS73581.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 2011C-3493]
gi|407066139|gb|AFS87186.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|429346208|gb|EKY82989.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429348960|gb|EKY85716.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02092]
gi|429361182|gb|EKY97839.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02030]
gi|429362613|gb|EKY99260.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02093]
gi|429362884|gb|EKY99529.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02281]
gi|429366002|gb|EKZ02614.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02318]
gi|429376857|gb|EKZ13385.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-02913]
gi|429379331|gb|EKZ15832.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-03439]
gi|429380899|gb|EKZ17388.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-03943]
gi|429393120|gb|EKZ29519.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. 11-04080]
gi|429405221|gb|EKZ41487.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429406987|gb|EKZ43241.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429410735|gb|EKZ46956.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429414447|gb|EKZ50622.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429421056|gb|EKZ57178.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429429390|gb|EKZ65459.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429432077|gb|EKZ68117.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429436283|gb|EKZ72299.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429438488|gb|EKZ74481.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429448110|gb|EKZ84027.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429451828|gb|EKZ87716.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429457772|gb|EKZ93610.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O104:H4 str. Ec12-0466]
gi|431309784|gb|ELF97977.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE48]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|374312614|ref|YP_005059044.1| 2OG-Fe(II) oxygenase [Granulicella mallensis MP5ACTX8]
gi|358754624|gb|AEU38014.1| 2OG-Fe(II) oxygenase [Granulicella mallensis MP5ACTX8]
Length = 217
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 35/227 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG +L+ R+ ++I + K P F G ++ + M C L W D
Sbjct: 19 LGPGTAILRGLALNRDALVIEALLSVAAKSP--FRHMVTPGGFRMSVAMTNCGALGWVTD 76
Query: 293 PQTRKYGK-KRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
+ +Y ++ G P+ +P F L + + ++A P PD
Sbjct: 77 RKGYRYAPVDPEIGGLWPA-MPKVFMDLAREAATKAG---------------YPTFVPDA 120
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y RL LHQD++E+ + P+VS S+G A FL+G ++K +V +
Sbjct: 121 CLINRYEPGARLTLHQDKNENDFEE----PIVSVSLGLPAVFLFGGLERSDKTIRVPVLH 176
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG-RLNLTFRQ 457
GDVL++GG +R +HGV+ + S P L G R NLTFR+
Sbjct: 177 GDVLVWGGPARLRYHGVNPLKDGSHP--------LAGGYRFNLTFRK 215
>gi|213417574|ref|ZP_03350716.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
Length = 257
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPLQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|26248599|ref|NP_754639.1| alkylated DNA repair protein AlkB [Escherichia coli CFT073]
gi|218690375|ref|YP_002398587.1| N1-methyladenine or N3-methylcytosine DNA lesion oxidative
demethylase [Escherichia coli ED1a]
gi|227887270|ref|ZP_04005075.1| alkylated DNA repair protein AlkB [Escherichia coli 83972]
gi|300983163|ref|ZP_07176468.1| alkylated DNA repair protein AlkB [Escherichia coli MS 45-1]
gi|301048957|ref|ZP_07195947.1| alkylated DNA repair protein AlkB [Escherichia coli MS 185-1]
gi|386630009|ref|YP_006149729.1| alkylated DNA repair protein AlkB [Escherichia coli str. 'clone D
i2']
gi|386634929|ref|YP_006154648.1| alkylated DNA repair protein AlkB [Escherichia coli str. 'clone D
i14']
gi|386639787|ref|YP_006106585.1| DNA repair system specific for alkylated DNA [Escherichia coli ABU
83972]
gi|432412426|ref|ZP_19655089.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE39]
gi|432432501|ref|ZP_19674930.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE187]
gi|432436939|ref|ZP_19679327.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE188]
gi|432441709|ref|ZP_19684049.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE189]
gi|432446823|ref|ZP_19689122.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE191]
gi|432457321|ref|ZP_19699505.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE201]
gi|432496322|ref|ZP_19738118.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE214]
gi|432505060|ref|ZP_19746784.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE220]
gi|432524411|ref|ZP_19761539.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE230]
gi|432569293|ref|ZP_19805805.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE53]
gi|432593479|ref|ZP_19829796.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE60]
gi|432608100|ref|ZP_19844285.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE67]
gi|432651786|ref|ZP_19887540.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE87]
gi|432784179|ref|ZP_20018358.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE63]
gi|432845183|ref|ZP_20078016.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE141]
gi|432974361|ref|ZP_20163200.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE209]
gi|432995949|ref|ZP_20184554.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE218]
gi|433000536|ref|ZP_20189061.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE223]
gi|433014478|ref|ZP_20202826.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE104]
gi|433024096|ref|ZP_20212084.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE106]
gi|433058732|ref|ZP_20245778.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE124]
gi|433087893|ref|ZP_20274264.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE137]
gi|433116147|ref|ZP_20301938.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE153]
gi|433125815|ref|ZP_20311374.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE160]
gi|433139884|ref|ZP_20325140.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE167]
gi|433149801|ref|ZP_20334822.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE174]
gi|433208387|ref|ZP_20392061.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE97]
gi|433213124|ref|ZP_20396714.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE99]
gi|433323686|ref|ZP_20401017.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
J96]
gi|442607990|ref|ZP_21022750.1| Alkylated DNA repair protein AlkB [Escherichia coli Nissle 1917]
gi|26109004|gb|AAN81207.1|AE016763_166 Alkylated DNA repair protein alkB [Escherichia coli CFT073]
gi|218427939|emb|CAR08859.2| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli ED1a]
gi|227835620|gb|EEJ46086.1| alkylated DNA repair protein AlkB [Escherichia coli 83972]
gi|300299228|gb|EFJ55613.1| alkylated DNA repair protein AlkB [Escherichia coli MS 185-1]
gi|300408623|gb|EFJ92161.1| alkylated DNA repair protein AlkB [Escherichia coli MS 45-1]
gi|307554279|gb|ADN47054.1| DNA repair system specific for alkylated DNA [Escherichia coli ABU
83972]
gi|355420908|gb|AER85105.1| alkylated DNA repair protein AlkB [Escherichia coli str. 'clone D
i2']
gi|355425828|gb|AER90024.1| alkylated DNA repair protein AlkB [Escherichia coli str. 'clone D
i14']
gi|430934833|gb|ELC55180.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE39]
gi|430952926|gb|ELC71840.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE187]
gi|430962270|gb|ELC80127.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE188]
gi|430966163|gb|ELC83571.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE189]
gi|430973096|gb|ELC90064.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE191]
gi|430982055|gb|ELC98774.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE201]
gi|431023580|gb|ELD36775.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE214]
gi|431038154|gb|ELD49123.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE220]
gi|431051527|gb|ELD61190.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE230]
gi|431100007|gb|ELE05023.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE53]
gi|431127579|gb|ELE29879.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE60]
gi|431137986|gb|ELE39826.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE67]
gi|431190233|gb|ELE89633.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE87]
gi|431328602|gb|ELG15906.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE63]
gi|431394605|gb|ELG78138.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE141]
gi|431489222|gb|ELH68850.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE209]
gi|431505509|gb|ELH84115.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE218]
gi|431508522|gb|ELH86794.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE223]
gi|431530576|gb|ELI07255.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE104]
gi|431535789|gb|ELI12128.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE106]
gi|431568987|gb|ELI41949.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE124]
gi|431604404|gb|ELI73813.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE137]
gi|431633909|gb|ELJ02171.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE153]
gi|431645049|gb|ELJ12702.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE160]
gi|431660197|gb|ELJ27085.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE167]
gi|431670470|gb|ELJ36823.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE174]
gi|431729672|gb|ELJ93291.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE97]
gi|431734149|gb|ELJ97550.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE99]
gi|432347784|gb|ELL42241.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
J96]
gi|441710595|emb|CCQ08727.1| Alkylated DNA repair protein AlkB [Escherichia coli Nissle 1917]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|15802765|ref|NP_288792.1| DNA repair system specific for alkylated DNA [Escherichia coli
O157:H7 str. EDL933]
gi|15832355|ref|NP_311128.1| alkylated DNA repair protein [Escherichia coli O157:H7 str. Sakai]
gi|168749619|ref|ZP_02774641.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4113]
gi|168754963|ref|ZP_02779970.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4401]
gi|168764708|ref|ZP_02789715.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4501]
gi|168767836|ref|ZP_02792843.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4486]
gi|168773065|ref|ZP_02798072.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4196]
gi|168780065|ref|ZP_02805072.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4076]
gi|168787122|ref|ZP_02812129.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC869]
gi|195935593|ref|ZP_03080975.1| alkylated DNA repair protein [Escherichia coli O157:H7 str. EC4024]
gi|208807664|ref|ZP_03250001.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4206]
gi|208812377|ref|ZP_03253706.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4045]
gi|208821524|ref|ZP_03261844.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4042]
gi|209398419|ref|YP_002271625.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4115]
gi|217327520|ref|ZP_03443603.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
TW14588]
gi|254794111|ref|YP_003078948.1| N1-methyladenine or N3-methylcytosine DNA lesion oxidative
demethylase [Escherichia coli O157:H7 str. TW14359]
gi|261223329|ref|ZP_05937610.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O157:H7 str. FRIK2000]
gi|261259121|ref|ZP_05951654.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O157:H7 str. FRIK966]
gi|291283463|ref|YP_003500281.1| alkylated DNA repair protein [Escherichia coli O55:H7 str. CB9615]
gi|387507601|ref|YP_006159857.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O55:H7 str. RM12579]
gi|387883432|ref|YP_006313734.1| alkylated DNA repair protein [Escherichia coli Xuzhou21]
gi|416286551|ref|ZP_11648450.1| Alkylated DNA repair protein AlkB [Shigella boydii ATCC 9905]
gi|416310887|ref|ZP_11656622.1| Alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
1044]
gi|416318215|ref|ZP_11660925.1| Alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC1212]
gi|416330556|ref|ZP_11669506.1| Alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
1125]
gi|416775446|ref|ZP_11874336.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H7 str. G5101]
gi|416787151|ref|ZP_11879247.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H- str. 493-89]
gi|416798746|ref|ZP_11884164.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H- str. H 2687]
gi|416809162|ref|ZP_11888849.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O55:H7 str. 3256-97]
gi|416819684|ref|ZP_11893406.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O55:H7 str. USDA 5905]
gi|416830554|ref|ZP_11898694.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H7 str. LSU-61]
gi|417688614|ref|ZP_12337855.1| alkylated DNA repair protein AlkB [Shigella boydii 5216-82]
gi|419046496|ref|ZP_13593433.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3A]
gi|419051929|ref|ZP_13598801.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3B]
gi|419057960|ref|ZP_13604765.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3C]
gi|419070325|ref|ZP_13615948.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3E]
gi|419076464|ref|ZP_13621982.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3F]
gi|419081418|ref|ZP_13626866.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4A]
gi|419087192|ref|ZP_13632549.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4B]
gi|419099084|ref|ZP_13644283.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4D]
gi|419104779|ref|ZP_13649908.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4E]
gi|419110237|ref|ZP_13655295.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4F]
gi|419115547|ref|ZP_13660565.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5A]
gi|419121178|ref|ZP_13666135.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5B]
gi|419126870|ref|ZP_13671755.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5C]
gi|419137264|ref|ZP_13682060.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5E]
gi|420270337|ref|ZP_14772695.1| alkylated DNA repair protein AlkB [Escherichia coli PA22]
gi|420276232|ref|ZP_14778516.1| alkylated DNA repair protein AlkB [Escherichia coli PA40]
gi|420281451|ref|ZP_14783689.1| alkylated DNA repair protein AlkB [Escherichia coli TW06591]
gi|420287378|ref|ZP_14789569.1| alkylated DNA repair protein AlkB [Escherichia coli TW10246]
gi|420293170|ref|ZP_14795293.1| alkylated DNA repair protein AlkB [Escherichia coli TW11039]
gi|420299044|ref|ZP_14801093.1| alkylated DNA repair protein AlkB [Escherichia coli TW09109]
gi|420304905|ref|ZP_14806901.1| alkylated DNA repair protein AlkB [Escherichia coli TW10119]
gi|420310659|ref|ZP_14812592.1| alkylated DNA repair protein AlkB [Escherichia coli EC1738]
gi|420315857|ref|ZP_14817733.1| alkylated DNA repair protein AlkB [Escherichia coli EC1734]
gi|421819023|ref|ZP_16254521.1| alkylated DNA repair protein AlkB [Escherichia coli 10.0821]
gi|421824847|ref|ZP_16260214.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK920]
gi|421831748|ref|ZP_16267035.1| alkylated DNA repair protein AlkB [Escherichia coli PA7]
gi|422834622|ref|ZP_16882683.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
E101]
gi|423725808|ref|ZP_17699918.1| alkylated DNA repair protein AlkB [Escherichia coli PA31]
gi|424078247|ref|ZP_17815251.1| alkylated DNA repair protein AlkB [Escherichia coli FDA505]
gi|424084703|ref|ZP_17821213.1| alkylated DNA repair protein AlkB [Escherichia coli FDA517]
gi|424097761|ref|ZP_17833098.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1985]
gi|424103962|ref|ZP_17838761.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1990]
gi|424110665|ref|ZP_17844923.1| alkylated DNA repair protein AlkB [Escherichia coli 93-001]
gi|424116554|ref|ZP_17850418.1| alkylated DNA repair protein AlkB [Escherichia coli PA3]
gi|424122768|ref|ZP_17856116.1| alkylated DNA repair protein AlkB [Escherichia coli PA5]
gi|424128906|ref|ZP_17861830.1| alkylated DNA repair protein AlkB [Escherichia coli PA9]
gi|424135160|ref|ZP_17867646.1| alkylated DNA repair protein AlkB [Escherichia coli PA10]
gi|424141761|ref|ZP_17873674.1| alkylated DNA repair protein AlkB [Escherichia coli PA14]
gi|424148191|ref|ZP_17879589.1| alkylated DNA repair protein AlkB [Escherichia coli PA15]
gi|424154066|ref|ZP_17885042.1| alkylated DNA repair protein AlkB [Escherichia coli PA24]
gi|424247891|ref|ZP_17890526.1| alkylated DNA repair protein AlkB [Escherichia coli PA25]
gi|424324426|ref|ZP_17896447.1| alkylated DNA repair protein AlkB [Escherichia coli PA28]
gi|424450451|ref|ZP_17902176.1| alkylated DNA repair protein AlkB [Escherichia coli PA32]
gi|424456647|ref|ZP_17907809.1| alkylated DNA repair protein AlkB [Escherichia coli PA33]
gi|424463033|ref|ZP_17913513.1| alkylated DNA repair protein AlkB [Escherichia coli PA39]
gi|424469399|ref|ZP_17919245.1| alkylated DNA repair protein AlkB [Escherichia coli PA41]
gi|424475938|ref|ZP_17925281.1| alkylated DNA repair protein AlkB [Escherichia coli PA42]
gi|424481690|ref|ZP_17930689.1| alkylated DNA repair protein AlkB [Escherichia coli TW07945]
gi|424487838|ref|ZP_17936426.1| alkylated DNA repair protein AlkB [Escherichia coli TW09098]
gi|424494428|ref|ZP_17942202.1| alkylated DNA repair protein AlkB [Escherichia coli TW09195]
gi|424501208|ref|ZP_17948132.1| alkylated DNA repair protein AlkB [Escherichia coli EC4203]
gi|424507441|ref|ZP_17953871.1| alkylated DNA repair protein AlkB [Escherichia coli EC4196]
gi|424514764|ref|ZP_17959481.1| alkylated DNA repair protein AlkB [Escherichia coli TW14313]
gi|424521087|ref|ZP_17965230.1| alkylated DNA repair protein AlkB [Escherichia coli TW14301]
gi|424526922|ref|ZP_17970656.1| alkylated DNA repair protein AlkB [Escherichia coli EC4421]
gi|424533082|ref|ZP_17976447.1| alkylated DNA repair protein AlkB [Escherichia coli EC4422]
gi|424539147|ref|ZP_17982116.1| alkylated DNA repair protein AlkB [Escherichia coli EC4013]
gi|424545166|ref|ZP_17987615.1| alkylated DNA repair protein AlkB [Escherichia coli EC4402]
gi|424551421|ref|ZP_17993305.1| alkylated DNA repair protein AlkB [Escherichia coli EC4439]
gi|424557608|ref|ZP_17999045.1| alkylated DNA repair protein AlkB [Escherichia coli EC4436]
gi|424563954|ref|ZP_18004974.1| alkylated DNA repair protein AlkB [Escherichia coli EC4437]
gi|424570079|ref|ZP_18010664.1| alkylated DNA repair protein AlkB [Escherichia coli EC4448]
gi|424576243|ref|ZP_18016346.1| alkylated DNA repair protein AlkB [Escherichia coli EC1845]
gi|424582086|ref|ZP_18021755.1| alkylated DNA repair protein AlkB [Escherichia coli EC1863]
gi|425098806|ref|ZP_18501558.1| alkylated DNA repair protein AlkB [Escherichia coli 3.4870]
gi|425104935|ref|ZP_18507264.1| alkylated DNA repair protein AlkB [Escherichia coli 5.2239]
gi|425110855|ref|ZP_18512790.1| alkylated DNA repair protein AlkB [Escherichia coli 6.0172]
gi|425126794|ref|ZP_18527990.1| alkylated DNA repair protein AlkB [Escherichia coli 8.0586]
gi|425132551|ref|ZP_18533415.1| alkylated DNA repair protein AlkB [Escherichia coli 8.2524]
gi|425139020|ref|ZP_18539426.1| alkylated DNA repair protein AlkB [Escherichia coli 10.0833]
gi|425144883|ref|ZP_18544892.1| alkylated DNA repair protein AlkB [Escherichia coli 10.0869]
gi|425150927|ref|ZP_18550561.1| alkylated DNA repair protein AlkB [Escherichia coli 88.0221]
gi|425156808|ref|ZP_18556089.1| alkylated DNA repair protein AlkB [Escherichia coli PA34]
gi|425163248|ref|ZP_18562143.1| alkylated DNA repair protein AlkB [Escherichia coli FDA506]
gi|425168913|ref|ZP_18567412.1| alkylated DNA repair protein AlkB [Escherichia coli FDA507]
gi|425175047|ref|ZP_18573177.1| alkylated DNA repair protein AlkB [Escherichia coli FDA504]
gi|425181078|ref|ZP_18578784.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1999]
gi|425187343|ref|ZP_18584626.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1997]
gi|425194112|ref|ZP_18590895.1| alkylated DNA repair protein AlkB [Escherichia coli NE1487]
gi|425200547|ref|ZP_18596777.1| alkylated DNA repair protein AlkB [Escherichia coli NE037]
gi|425206970|ref|ZP_18602782.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK2001]
gi|425212661|ref|ZP_18608082.1| alkylated DNA repair protein AlkB [Escherichia coli PA4]
gi|425218776|ref|ZP_18613767.1| alkylated DNA repair protein AlkB [Escherichia coli PA23]
gi|425225304|ref|ZP_18619805.1| alkylated DNA repair protein AlkB [Escherichia coli PA49]
gi|425231668|ref|ZP_18625717.1| alkylated DNA repair protein AlkB [Escherichia coli PA45]
gi|425237585|ref|ZP_18631315.1| alkylated DNA repair protein AlkB [Escherichia coli TT12B]
gi|425243804|ref|ZP_18637124.1| alkylated DNA repair protein AlkB [Escherichia coli MA6]
gi|425249926|ref|ZP_18642877.1| alkylated DNA repair protein AlkB [Escherichia coli 5905]
gi|425255786|ref|ZP_18648321.1| alkylated DNA repair protein AlkB [Escherichia coli CB7326]
gi|425262004|ref|ZP_18654034.1| alkylated DNA repair protein AlkB [Escherichia coli EC96038]
gi|425268040|ref|ZP_18659684.1| alkylated DNA repair protein AlkB [Escherichia coli 5412]
gi|425295474|ref|ZP_18685694.1| alkylated DNA repair protein AlkB [Escherichia coli PA38]
gi|425312144|ref|ZP_18701346.1| alkylated DNA repair protein AlkB [Escherichia coli EC1735]
gi|425318091|ref|ZP_18706901.1| alkylated DNA repair protein AlkB [Escherichia coli EC1736]
gi|425324192|ref|ZP_18712582.1| alkylated DNA repair protein AlkB [Escherichia coli EC1737]
gi|425330475|ref|ZP_18718364.1| alkylated DNA repair protein AlkB [Escherichia coli EC1846]
gi|425336639|ref|ZP_18724046.1| alkylated DNA repair protein AlkB [Escherichia coli EC1847]
gi|425343047|ref|ZP_18729964.1| alkylated DNA repair protein AlkB [Escherichia coli EC1848]
gi|425348848|ref|ZP_18735347.1| alkylated DNA repair protein AlkB [Escherichia coli EC1849]
gi|425355144|ref|ZP_18741234.1| alkylated DNA repair protein AlkB [Escherichia coli EC1850]
gi|425361104|ref|ZP_18746777.1| alkylated DNA repair protein AlkB [Escherichia coli EC1856]
gi|425367274|ref|ZP_18752472.1| alkylated DNA repair protein AlkB [Escherichia coli EC1862]
gi|425373650|ref|ZP_18758316.1| alkylated DNA repair protein AlkB [Escherichia coli EC1864]
gi|425386497|ref|ZP_18770077.1| alkylated DNA repair protein AlkB [Escherichia coli EC1866]
gi|425393219|ref|ZP_18776349.1| alkylated DNA repair protein AlkB [Escherichia coli EC1868]
gi|425399317|ref|ZP_18782047.1| alkylated DNA repair protein AlkB [Escherichia coli EC1869]
gi|425405396|ref|ZP_18787652.1| alkylated DNA repair protein AlkB [Escherichia coli EC1870]
gi|425411800|ref|ZP_18793591.1| alkylated DNA repair protein AlkB [Escherichia coli NE098]
gi|425418131|ref|ZP_18799425.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK523]
gi|425429460|ref|ZP_18810086.1| alkylated DNA repair protein AlkB [Escherichia coli 0.1304]
gi|428947831|ref|ZP_19020137.1| alkylated DNA repair protein AlkB [Escherichia coli 88.1467]
gi|428953931|ref|ZP_19025746.1| alkylated DNA repair protein AlkB [Escherichia coli 88.1042]
gi|428959868|ref|ZP_19031202.1| alkylated DNA repair protein AlkB [Escherichia coli 89.0511]
gi|428966437|ref|ZP_19037215.1| alkylated DNA repair protein AlkB [Escherichia coli 90.0091]
gi|428972322|ref|ZP_19042684.1| alkylated DNA repair protein AlkB [Escherichia coli 90.0039]
gi|428978823|ref|ZP_19048666.1| alkylated DNA repair protein AlkB [Escherichia coli 90.2281]
gi|428984442|ref|ZP_19053854.1| alkylated DNA repair protein AlkB [Escherichia coli 93.0055]
gi|428990690|ref|ZP_19059697.1| alkylated DNA repair protein AlkB [Escherichia coli 93.0056]
gi|428996490|ref|ZP_19065119.1| alkylated DNA repair protein AlkB [Escherichia coli 94.0618]
gi|429002730|ref|ZP_19070891.1| alkylated DNA repair protein AlkB [Escherichia coli 95.0183]
gi|429008871|ref|ZP_19076415.1| alkylated DNA repair protein AlkB [Escherichia coli 95.1288]
gi|429015316|ref|ZP_19082237.1| alkylated DNA repair protein AlkB [Escherichia coli 95.0943]
gi|429021266|ref|ZP_19087805.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0428]
gi|429027279|ref|ZP_19093312.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0427]
gi|429033487|ref|ZP_19099029.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0939]
gi|429039586|ref|ZP_19104719.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0932]
gi|429045446|ref|ZP_19110177.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0107]
gi|429050885|ref|ZP_19115463.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0003]
gi|429056218|ref|ZP_19120568.1| alkylated DNA repair protein AlkB [Escherichia coli 97.1742]
gi|429061762|ref|ZP_19125801.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0007]
gi|429068067|ref|ZP_19131551.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0672]
gi|429073970|ref|ZP_19137234.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0678]
gi|429079167|ref|ZP_19142314.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0713]
gi|429827170|ref|ZP_19358248.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0109]
gi|429833498|ref|ZP_19363895.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0010]
gi|432392725|ref|ZP_19635555.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE21]
gi|432450375|ref|ZP_19692640.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE193]
gi|432815965|ref|ZP_20049749.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE115]
gi|432948092|ref|ZP_20143248.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE196]
gi|433034054|ref|ZP_20221770.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE112]
gi|433043796|ref|ZP_20231291.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE117]
gi|444925756|ref|ZP_21245072.1| alkylated DNA repair protein AlkB [Escherichia coli 09BKT078844]
gi|444931461|ref|ZP_21250518.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0814]
gi|444936870|ref|ZP_21255665.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0815]
gi|444942497|ref|ZP_21261033.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0816]
gi|444953568|ref|ZP_21271679.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0848]
gi|444959058|ref|ZP_21276927.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1753]
gi|444966774|ref|ZP_21284289.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1775]
gi|444970190|ref|ZP_21287566.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1793]
gi|444975449|ref|ZP_21292595.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1805]
gi|444980922|ref|ZP_21297841.1| alkylated DNA repair protein AlkB [Escherichia coli ATCC 700728]
gi|444986272|ref|ZP_21303065.1| alkylated DNA repair protein AlkB [Escherichia coli PA11]
gi|444991586|ref|ZP_21308242.1| alkylated DNA repair protein AlkB [Escherichia coli PA19]
gi|444996879|ref|ZP_21313390.1| alkylated DNA repair protein AlkB [Escherichia coli PA13]
gi|445002435|ref|ZP_21318835.1| alkylated DNA repair protein AlkB [Escherichia coli PA2]
gi|445007935|ref|ZP_21324188.1| alkylated DNA repair protein AlkB [Escherichia coli PA47]
gi|445012967|ref|ZP_21329085.1| alkylated DNA repair protein AlkB [Escherichia coli PA48]
gi|445018845|ref|ZP_21334821.1| alkylated DNA repair protein AlkB [Escherichia coli PA8]
gi|445024352|ref|ZP_21340187.1| alkylated DNA repair protein AlkB [Escherichia coli 7.1982]
gi|445029627|ref|ZP_21345315.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1781]
gi|445035088|ref|ZP_21350630.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1762]
gi|445040714|ref|ZP_21356103.1| alkylated DNA repair protein AlkB [Escherichia coli PA35]
gi|445045910|ref|ZP_21361174.1| alkylated DNA repair protein AlkB [Escherichia coli 3.4880]
gi|445051483|ref|ZP_21366547.1| alkylated DNA repair protein AlkB [Escherichia coli 95.0083]
gi|445057243|ref|ZP_21372113.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0670]
gi|452971965|ref|ZP_21970192.1| alpha-ketoglutarate-dependent dioxygenase [Escherichia coli O157:H7
str. EC4009]
gi|12516547|gb|AAG57347.1|AE005453_4 DNA repair system specific for alkylated DNA [Escherichia coli
O157:H7 str. EDL933]
gi|13362570|dbj|BAB36524.1| alkylated DNA repair protein [Escherichia coli O157:H7 str. Sakai]
gi|187771131|gb|EDU34975.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4196]
gi|188016117|gb|EDU54239.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4113]
gi|189002134|gb|EDU71120.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4076]
gi|189357628|gb|EDU76047.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4401]
gi|189362800|gb|EDU81219.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4486]
gi|189365342|gb|EDU83758.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4501]
gi|189372948|gb|EDU91364.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC869]
gi|208727465|gb|EDZ77066.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4206]
gi|208733654|gb|EDZ82341.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4045]
gi|208741647|gb|EDZ89329.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4042]
gi|209159819|gb|ACI37252.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC4115]
gi|209765658|gb|ACI81141.1| alkylated DNA repair protein [Escherichia coli]
gi|209765660|gb|ACI81142.1| alkylated DNA repair protein [Escherichia coli]
gi|209765662|gb|ACI81143.1| alkylated DNA repair protein [Escherichia coli]
gi|209765664|gb|ACI81144.1| alkylated DNA repair protein [Escherichia coli]
gi|209765666|gb|ACI81145.1| alkylated DNA repair protein [Escherichia coli]
gi|217319887|gb|EEC28312.1| alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
TW14588]
gi|254593511|gb|ACT72872.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O157:H7 str. TW14359]
gi|290763336|gb|ADD57297.1| alkylated DNA repair protein [Escherichia coli O55:H7 str. CB9615]
gi|320178816|gb|EFW53779.1| Alkylated DNA repair protein AlkB [Shigella boydii ATCC 9905]
gi|320192162|gb|EFW66807.1| Alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
EC1212]
gi|320641281|gb|EFX10759.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H7 str. G5101]
gi|320646554|gb|EFX15470.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H- str. 493-89]
gi|320651925|gb|EFX20300.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H- str. H 2687]
gi|320657650|gb|EFX25448.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320663106|gb|EFX30419.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O55:H7 str. USDA 5905]
gi|320668006|gb|EFX34909.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H7 str. LSU-61]
gi|326339565|gb|EGD63376.1| Alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
1125]
gi|326344026|gb|EGD67787.1| Alkylated DNA repair protein AlkB [Escherichia coli O157:H7 str.
1044]
gi|332093161|gb|EGI98221.1| alkylated DNA repair protein AlkB [Shigella boydii 5216-82]
gi|371601414|gb|EHN90164.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
E101]
gi|374359595|gb|AEZ41302.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O55:H7 str. RM12579]
gi|377893326|gb|EHU57765.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3A]
gi|377893614|gb|EHU58048.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3B]
gi|377904547|gb|EHU68825.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3C]
gi|377912155|gb|EHU76318.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3E]
gi|377921505|gb|EHU85504.1| alkylated DNA repair protein AlkB [Escherichia coli DEC3F]
gi|377926048|gb|EHU89983.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4A]
gi|377930382|gb|EHU94265.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4B]
gi|377942194|gb|EHV05930.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4D]
gi|377947262|gb|EHV10929.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4E]
gi|377957119|gb|EHV20655.1| alkylated DNA repair protein AlkB [Escherichia coli DEC4F]
gi|377960497|gb|EHV23978.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5A]
gi|377966899|gb|EHV30308.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5B]
gi|377974982|gb|EHV38307.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5C]
gi|377984257|gb|EHV47492.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5E]
gi|386796890|gb|AFJ29924.1| alkylated DNA repair protein [Escherichia coli Xuzhou21]
gi|390643184|gb|EIN22547.1| alkylated DNA repair protein AlkB [Escherichia coli FDA517]
gi|390644213|gb|EIN23506.1| alkylated DNA repair protein AlkB [Escherichia coli FDA505]
gi|390660880|gb|EIN38570.1| alkylated DNA repair protein AlkB [Escherichia coli 93-001]
gi|390662392|gb|EIN39996.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1985]
gi|390664184|gb|EIN41646.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1990]
gi|390677986|gb|EIN53986.1| alkylated DNA repair protein AlkB [Escherichia coli PA3]
gi|390681198|gb|EIN57002.1| alkylated DNA repair protein AlkB [Escherichia coli PA5]
gi|390683886|gb|EIN59538.1| alkylated DNA repair protein AlkB [Escherichia coli PA9]
gi|390697108|gb|EIN71542.1| alkylated DNA repair protein AlkB [Escherichia coli PA10]
gi|390701154|gb|EIN75409.1| alkylated DNA repair protein AlkB [Escherichia coli PA15]
gi|390701862|gb|EIN76080.1| alkylated DNA repair protein AlkB [Escherichia coli PA14]
gi|390713849|gb|EIN86763.1| alkylated DNA repair protein AlkB [Escherichia coli PA22]
gi|390723152|gb|EIN95772.1| alkylated DNA repair protein AlkB [Escherichia coli PA25]
gi|390724698|gb|EIN97247.1| alkylated DNA repair protein AlkB [Escherichia coli PA24]
gi|390727869|gb|EIO00252.1| alkylated DNA repair protein AlkB [Escherichia coli PA28]
gi|390743093|gb|EIO14080.1| alkylated DNA repair protein AlkB [Escherichia coli PA31]
gi|390743317|gb|EIO14294.1| alkylated DNA repair protein AlkB [Escherichia coli PA32]
gi|390745900|gb|EIO16680.1| alkylated DNA repair protein AlkB [Escherichia coli PA33]
gi|390757642|gb|EIO27112.1| alkylated DNA repair protein AlkB [Escherichia coli PA40]
gi|390767845|gb|EIO36911.1| alkylated DNA repair protein AlkB [Escherichia coli PA41]
gi|390769180|gb|EIO38132.1| alkylated DNA repair protein AlkB [Escherichia coli PA39]
gi|390769571|gb|EIO38498.1| alkylated DNA repair protein AlkB [Escherichia coli PA42]
gi|390781738|gb|EIO49415.1| alkylated DNA repair protein AlkB [Escherichia coli TW06591]
gi|390790135|gb|EIO57563.1| alkylated DNA repair protein AlkB [Escherichia coli TW10246]
gi|390791327|gb|EIO58718.1| alkylated DNA repair protein AlkB [Escherichia coli TW07945]
gi|390797256|gb|EIO64512.1| alkylated DNA repair protein AlkB [Escherichia coli TW11039]
gi|390806564|gb|EIO73467.1| alkylated DNA repair protein AlkB [Escherichia coli TW09098]
gi|390806739|gb|EIO73641.1| alkylated DNA repair protein AlkB [Escherichia coli TW09109]
gi|390815927|gb|EIO82439.1| alkylated DNA repair protein AlkB [Escherichia coli TW10119]
gi|390826228|gb|EIO92084.1| alkylated DNA repair protein AlkB [Escherichia coli EC4203]
gi|390830788|gb|EIO96282.1| alkylated DNA repair protein AlkB [Escherichia coli TW09195]
gi|390831758|gb|EIO97126.1| alkylated DNA repair protein AlkB [Escherichia coli EC4196]
gi|390846231|gb|EIP09835.1| alkylated DNA repair protein AlkB [Escherichia coli TW14301]
gi|390847443|gb|EIP10985.1| alkylated DNA repair protein AlkB [Escherichia coli TW14313]
gi|390850909|gb|EIP14250.1| alkylated DNA repair protein AlkB [Escherichia coli EC4421]
gi|390861688|gb|EIP23932.1| alkylated DNA repair protein AlkB [Escherichia coli EC4422]
gi|390865890|gb|EIP27884.1| alkylated DNA repair protein AlkB [Escherichia coli EC4013]
gi|390871126|gb|EIP32568.1| alkylated DNA repair protein AlkB [Escherichia coli EC4402]
gi|390878945|gb|EIP39755.1| alkylated DNA repair protein AlkB [Escherichia coli EC4439]
gi|390883965|gb|EIP44354.1| alkylated DNA repair protein AlkB [Escherichia coli EC4436]
gi|390893972|gb|EIP53506.1| alkylated DNA repair protein AlkB [Escherichia coli EC4437]
gi|390896242|gb|EIP55633.1| alkylated DNA repair protein AlkB [Escherichia coli EC4448]
gi|390899938|gb|EIP59174.1| alkylated DNA repair protein AlkB [Escherichia coli EC1738]
gi|390907847|gb|EIP66688.1| alkylated DNA repair protein AlkB [Escherichia coli EC1734]
gi|390919591|gb|EIP77940.1| alkylated DNA repair protein AlkB [Escherichia coli EC1863]
gi|390920560|gb|EIP78828.1| alkylated DNA repair protein AlkB [Escherichia coli EC1845]
gi|408064120|gb|EKG98602.1| alkylated DNA repair protein AlkB [Escherichia coli PA7]
gi|408067899|gb|EKH02327.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK920]
gi|408071192|gb|EKH05545.1| alkylated DNA repair protein AlkB [Escherichia coli PA34]
gi|408078836|gb|EKH12964.1| alkylated DNA repair protein AlkB [Escherichia coli FDA506]
gi|408083145|gb|EKH17063.1| alkylated DNA repair protein AlkB [Escherichia coli FDA507]
gi|408091405|gb|EKH24636.1| alkylated DNA repair protein AlkB [Escherichia coli FDA504]
gi|408097518|gb|EKH30409.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1999]
gi|408104225|gb|EKH36547.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1997]
gi|408108453|gb|EKH40456.1| alkylated DNA repair protein AlkB [Escherichia coli NE1487]
gi|408115240|gb|EKH46706.1| alkylated DNA repair protein AlkB [Escherichia coli NE037]
gi|408121287|gb|EKH52248.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK2001]
gi|408127767|gb|EKH58204.1| alkylated DNA repair protein AlkB [Escherichia coli PA4]
gi|408138797|gb|EKH68453.1| alkylated DNA repair protein AlkB [Escherichia coli PA23]
gi|408140450|gb|EKH69966.1| alkylated DNA repair protein AlkB [Escherichia coli PA49]
gi|408146069|gb|EKH75212.1| alkylated DNA repair protein AlkB [Escherichia coli PA45]
gi|408155426|gb|EKH83749.1| alkylated DNA repair protein AlkB [Escherichia coli TT12B]
gi|408160083|gb|EKH88127.1| alkylated DNA repair protein AlkB [Escherichia coli MA6]
gi|408164093|gb|EKH91933.1| alkylated DNA repair protein AlkB [Escherichia coli 5905]
gi|408173559|gb|EKI00579.1| alkylated DNA repair protein AlkB [Escherichia coli CB7326]
gi|408180671|gb|EKI07276.1| alkylated DNA repair protein AlkB [Escherichia coli EC96038]
gi|408183101|gb|EKI09575.1| alkylated DNA repair protein AlkB [Escherichia coli 5412]
gi|408218032|gb|EKI42266.1| alkylated DNA repair protein AlkB [Escherichia coli PA38]
gi|408227605|gb|EKI51187.1| alkylated DNA repair protein AlkB [Escherichia coli EC1735]
gi|408238659|gb|EKI61445.1| alkylated DNA repair protein AlkB [Escherichia coli EC1736]
gi|408243161|gb|EKI65705.1| alkylated DNA repair protein AlkB [Escherichia coli EC1737]
gi|408247537|gb|EKI69737.1| alkylated DNA repair protein AlkB [Escherichia coli EC1846]
gi|408256620|gb|EKI77995.1| alkylated DNA repair protein AlkB [Escherichia coli EC1847]
gi|408259322|gb|EKI80509.1| alkylated DNA repair protein AlkB [Escherichia coli EC1848]
gi|408265715|gb|EKI86397.1| alkylated DNA repair protein AlkB [Escherichia coli EC1849]
gi|408275007|gb|EKI94989.1| alkylated DNA repair protein AlkB [Escherichia coli EC1850]
gi|408277300|gb|EKI97110.1| alkylated DNA repair protein AlkB [Escherichia coli EC1856]
gi|408287134|gb|EKJ06030.1| alkylated DNA repair protein AlkB [Escherichia coli EC1862]
gi|408291303|gb|EKJ09937.1| alkylated DNA repair protein AlkB [Escherichia coli EC1864]
gi|408308340|gb|EKJ25610.1| alkylated DNA repair protein AlkB [Escherichia coli EC1868]
gi|408308504|gb|EKJ25773.1| alkylated DNA repair protein AlkB [Escherichia coli EC1866]
gi|408319512|gb|EKJ35648.1| alkylated DNA repair protein AlkB [Escherichia coli EC1869]
gi|408326105|gb|EKJ41934.1| alkylated DNA repair protein AlkB [Escherichia coli EC1870]
gi|408326948|gb|EKJ42717.1| alkylated DNA repair protein AlkB [Escherichia coli NE098]
gi|408336913|gb|EKJ51661.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK523]
gi|408346713|gb|EKJ60999.1| alkylated DNA repair protein AlkB [Escherichia coli 0.1304]
gi|408550223|gb|EKK27568.1| alkylated DNA repair protein AlkB [Escherichia coli 5.2239]
gi|408550847|gb|EKK28163.1| alkylated DNA repair protein AlkB [Escherichia coli 3.4870]
gi|408551105|gb|EKK28392.1| alkylated DNA repair protein AlkB [Escherichia coli 6.0172]
gi|408570319|gb|EKK46299.1| alkylated DNA repair protein AlkB [Escherichia coli 8.0586]
gi|408579918|gb|EKK55366.1| alkylated DNA repair protein AlkB [Escherichia coli 10.0833]
gi|408581556|gb|EKK56891.1| alkylated DNA repair protein AlkB [Escherichia coli 8.2524]
gi|408591604|gb|EKK66025.1| alkylated DNA repair protein AlkB [Escherichia coli 10.0869]
gi|408596650|gb|EKK70775.1| alkylated DNA repair protein AlkB [Escherichia coli 88.0221]
gi|408612780|gb|EKK86114.1| alkylated DNA repair protein AlkB [Escherichia coli 10.0821]
gi|427205080|gb|EKV75340.1| alkylated DNA repair protein AlkB [Escherichia coli 88.1042]
gi|427207457|gb|EKV77626.1| alkylated DNA repair protein AlkB [Escherichia coli 89.0511]
gi|427208690|gb|EKV78779.1| alkylated DNA repair protein AlkB [Escherichia coli 88.1467]
gi|427222254|gb|EKV91046.1| alkylated DNA repair protein AlkB [Escherichia coli 90.0091]
gi|427224606|gb|EKV93311.1| alkylated DNA repair protein AlkB [Escherichia coli 90.2281]
gi|427228064|gb|EKV96548.1| alkylated DNA repair protein AlkB [Escherichia coli 90.0039]
gi|427242318|gb|EKW09733.1| alkylated DNA repair protein AlkB [Escherichia coli 93.0056]
gi|427242744|gb|EKW10141.1| alkylated DNA repair protein AlkB [Escherichia coli 93.0055]
gi|427246471|gb|EKW13685.1| alkylated DNA repair protein AlkB [Escherichia coli 94.0618]
gi|427261728|gb|EKW27645.1| alkylated DNA repair protein AlkB [Escherichia coli 95.0183]
gi|427262292|gb|EKW28193.1| alkylated DNA repair protein AlkB [Escherichia coli 95.0943]
gi|427265049|gb|EKW30676.1| alkylated DNA repair protein AlkB [Escherichia coli 95.1288]
gi|427276828|gb|EKW41393.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0428]
gi|427279682|gb|EKW44093.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0427]
gi|427283449|gb|EKW47657.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0939]
gi|427292211|gb|EKW55567.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0932]
gi|427299538|gb|EKW62509.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0107]
gi|427300811|gb|EKW63736.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0003]
gi|427313481|gb|EKW75589.1| alkylated DNA repair protein AlkB [Escherichia coli 97.1742]
gi|427316048|gb|EKW78022.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0007]
gi|427319757|gb|EKW81560.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0672]
gi|427328576|gb|EKW89938.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0678]
gi|427329497|gb|EKW90823.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0713]
gi|429254244|gb|EKY38684.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0109]
gi|429255842|gb|EKY40126.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0010]
gi|430917881|gb|ELC38920.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE21]
gi|430979765|gb|ELC96530.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE193]
gi|431364189|gb|ELG50733.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE115]
gi|431458070|gb|ELH38407.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE196]
gi|431551060|gb|ELI25047.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE112]
gi|431555634|gb|ELI29473.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE117]
gi|444538698|gb|ELV18545.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0814]
gi|444540188|gb|ELV19887.1| alkylated DNA repair protein AlkB [Escherichia coli 09BKT078844]
gi|444547848|gb|ELV26405.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0815]
gi|444558910|gb|ELV36171.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0816]
gi|444563882|gb|ELV40858.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0848]
gi|444569550|gb|ELV46132.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1775]
gi|444573577|gb|ELV49942.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1753]
gi|444579743|gb|ELV55720.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1793]
gi|444593717|gb|ELV68924.1| alkylated DNA repair protein AlkB [Escherichia coli ATCC 700728]
gi|444593977|gb|ELV69181.1| alkylated DNA repair protein AlkB [Escherichia coli PA11]
gi|444596226|gb|ELV71309.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1805]
gi|444607435|gb|ELV82013.1| alkylated DNA repair protein AlkB [Escherichia coli PA13]
gi|444607740|gb|ELV82308.1| alkylated DNA repair protein AlkB [Escherichia coli PA19]
gi|444616294|gb|ELV90462.1| alkylated DNA repair protein AlkB [Escherichia coli PA2]
gi|444624199|gb|ELV98104.1| alkylated DNA repair protein AlkB [Escherichia coli PA47]
gi|444624609|gb|ELV98491.1| alkylated DNA repair protein AlkB [Escherichia coli PA48]
gi|444630241|gb|ELW03906.1| alkylated DNA repair protein AlkB [Escherichia coli PA8]
gi|444639056|gb|ELW12377.1| alkylated DNA repair protein AlkB [Escherichia coli 7.1982]
gi|444641962|gb|ELW15178.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1781]
gi|444645592|gb|ELW18654.1| alkylated DNA repair protein AlkB [Escherichia coli 99.1762]
gi|444654789|gb|ELW27436.1| alkylated DNA repair protein AlkB [Escherichia coli PA35]
gi|444660207|gb|ELW32580.1| alkylated DNA repair protein AlkB [Escherichia coli 3.4880]
gi|444665084|gb|ELW37234.1| alkylated DNA repair protein AlkB [Escherichia coli 95.0083]
gi|444669992|gb|ELW41926.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0670]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|416296631|ref|ZP_11651491.1| Alkylated DNA repair protein AlkB [Shigella flexneri CDC 796-83]
gi|417682823|ref|ZP_12332176.1| alkylated DNA repair protein AlkB [Shigella boydii 3594-74]
gi|420326143|ref|ZP_14827895.1| alkylated DNA repair protein AlkB [Shigella flexneri CCH060]
gi|420351568|ref|ZP_14852752.1| alkylated DNA repair protein AlkB [Shigella boydii 4444-74]
gi|421683275|ref|ZP_16123071.1| alkylated DNA repair protein AlkB [Shigella flexneri 1485-80]
gi|320185887|gb|EFW60637.1| Alkylated DNA repair protein AlkB [Shigella flexneri CDC 796-83]
gi|332093507|gb|EGI98565.1| alkylated DNA repair protein AlkB [Shigella boydii 3594-74]
gi|391250646|gb|EIQ09866.1| alkylated DNA repair protein AlkB [Shigella flexneri CCH060]
gi|391287295|gb|EIQ45825.1| alkylated DNA repair protein AlkB [Shigella boydii 4444-74]
gi|404339129|gb|EJZ65569.1| alkylated DNA repair protein AlkB [Shigella flexneri 1485-80]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFYP-------LTTDCRYNLTFRQ 211
>gi|419132231|ref|ZP_13677068.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5D]
gi|424091187|ref|ZP_17827132.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1996]
gi|444948077|ref|ZP_21266399.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0839]
gi|377975194|gb|EHV38515.1| alkylated DNA repair protein AlkB [Escherichia coli DEC5D]
gi|390641669|gb|EIN21093.1| alkylated DNA repair protein AlkB [Escherichia coli FRIK1996]
gi|444557657|gb|ELV34983.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0839]
Length = 215
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 81 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 115
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 116 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 171
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 172 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 210
>gi|336251300|ref|YP_004595010.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
aerogenes KCTC 2190]
gi|444350379|ref|YP_007386523.1| Alkylated DNA repair protein AlkB [Enterobacter aerogenes EA1509E]
gi|334737356|gb|AEG99731.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
aerogenes KCTC 2190]
gi|443901209|emb|CCG28983.1| Alkylated DNA repair protein AlkB [Enterobacter aerogenes EA1509E]
Length = 219
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 11/110 (10%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
SPD C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +
Sbjct: 112 FSPDACLINRYQPGAKLSLHQDKDER--DLRA--PIVSVSLGLPAVFQFGGLKRNDPLRR 167
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+LLE GDV+++GGESR +HG+ + P E+ + R NLTFR
Sbjct: 168 LLLEHGDVVVWGGESRLFYHGIQPLKPG-------EHPLTGACRYNLTFR 210
>gi|419365710|ref|ZP_13906872.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13E]
gi|378212945|gb|EHX73264.1| alkylated DNA repair protein AlkB [Escherichia coli DEC13E]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|420348093|ref|ZP_14849482.1| alkylated DNA repair protein AlkB [Shigella boydii 965-58]
gi|391269096|gb|EIQ28008.1| alkylated DNA repair protein AlkB [Shigella boydii 965-58]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|419381481|ref|ZP_13922432.1| alkylated DNA repair protein AlkB [Escherichia coli DEC14C]
gi|378227848|gb|EHX88016.1| alkylated DNA repair protein AlkB [Escherichia coli DEC14C]
Length = 215
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 81 DPQTNKPWP----------AMPQSFHNLCQRAATAAG---------------YPDFQPDA 115
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 116 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 171
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 172 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 210
>gi|316935118|ref|YP_004110100.1| 2OG-Fe(II) oxygenase [Rhodopseudomonas palustris DX-1]
gi|315602832|gb|ADU45367.1| 2OG-Fe(II) oxygenase [Rhodopseudomonas palustris DX-1]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 26/146 (17%)
Query: 312 IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDE 371
+P+ + L QR+ +EA PD C++N Y R+ LHQD+DE
Sbjct: 95 MPAVLRDLAQRASAEAG---------------FAGFDPDACLINRYVPGARMALHQDKDE 139
Query: 372 SRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
+S P+VS S+G A F +G ++K + L GDV ++GG SR V+HGV ++
Sbjct: 140 VDFSA----PIVSVSLGLPATFQFGGMARSDKPRRYELRHGDVFVWGGPSRLVYHGVLTL 195
Query: 432 NPNSAPGALLENTMLRPGRLNLTFRQ 457
E+ +L R+NLTFR+
Sbjct: 196 QDG-------EHPLLGRQRINLTFRK 214
>gi|218705742|ref|YP_002413261.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli UMN026]
gi|293405679|ref|ZP_06649671.1| alkylated DNA repair protein AlkB [Escherichia coli FVEC1412]
gi|300897724|ref|ZP_07116120.1| alkylated DNA repair protein AlkB [Escherichia coli MS 198-1]
gi|417587228|ref|ZP_12237998.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_C165-02]
gi|419932855|ref|ZP_14450137.1| 2OG-Fe(II) oxygenase [Escherichia coli 576-1]
gi|432354151|ref|ZP_19597424.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE2]
gi|432402503|ref|ZP_19645255.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE26]
gi|432426767|ref|ZP_19669268.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE181]
gi|432461233|ref|ZP_19703382.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE204]
gi|432476440|ref|ZP_19718439.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE208]
gi|432489888|ref|ZP_19731762.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE213]
gi|432518282|ref|ZP_19755470.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE228]
gi|432538403|ref|ZP_19775305.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE235]
gi|432631998|ref|ZP_19867924.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE80]
gi|432641712|ref|ZP_19877546.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE83]
gi|432666607|ref|ZP_19902188.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE116]
gi|432775296|ref|ZP_20009575.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE54]
gi|432839896|ref|ZP_20073382.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE140]
gi|432887193|ref|ZP_20101267.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE158]
gi|432913391|ref|ZP_20119088.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE190]
gi|433019280|ref|ZP_20207501.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE105]
gi|433053820|ref|ZP_20241000.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE122]
gi|433068525|ref|ZP_20255315.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE128]
gi|433159254|ref|ZP_20344092.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE177]
gi|433179067|ref|ZP_20363467.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE82]
gi|433203829|ref|ZP_20387605.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE95]
gi|218432839|emb|CAR13733.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli UMN026]
gi|291427887|gb|EFF00914.1| alkylated DNA repair protein AlkB [Escherichia coli FVEC1412]
gi|300358540|gb|EFJ74410.1| alkylated DNA repair protein AlkB [Escherichia coli MS 198-1]
gi|345336364|gb|EGW68800.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_C165-02]
gi|388415431|gb|EIL75360.1| 2OG-Fe(II) oxygenase [Escherichia coli 576-1]
gi|430875324|gb|ELB98866.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE2]
gi|430924974|gb|ELC45647.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE26]
gi|430955699|gb|ELC74481.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE181]
gi|430988923|gb|ELD05392.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE204]
gi|431005608|gb|ELD20629.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE208]
gi|431020505|gb|ELD33850.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE213]
gi|431050904|gb|ELD60580.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE228]
gi|431069292|gb|ELD77621.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE235]
gi|431170198|gb|ELE70392.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE80]
gi|431181595|gb|ELE81457.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE83]
gi|431200901|gb|ELE99619.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE116]
gi|431318335|gb|ELG06101.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE54]
gi|431389069|gb|ELG72784.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE140]
gi|431416191|gb|ELG98678.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE158]
gi|431439691|gb|ELH21024.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE190]
gi|431531181|gb|ELI07850.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE105]
gi|431570220|gb|ELI43146.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE122]
gi|431584152|gb|ELI56139.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE128]
gi|431677893|gb|ELJ43906.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE177]
gi|431701432|gb|ELJ66351.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE82]
gi|431721378|gb|ELJ85373.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE95]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|193062349|ref|ZP_03043444.1| alkylated DNA repair protein AlkB [Escherichia coli E22]
gi|194427195|ref|ZP_03059746.1| alkylated DNA repair protein AlkB [Escherichia coli B171]
gi|260844815|ref|YP_003222593.1| oxidative demethylase AlkB [Escherichia coli O103:H2 str. 12009]
gi|293415512|ref|ZP_06658155.1| alkylated DNA repair protein [Escherichia coli B185]
gi|300818184|ref|ZP_07098396.1| alkylated DNA repair protein AlkB [Escherichia coli MS 107-1]
gi|332278630|ref|ZP_08391043.1| alkylated DNA repair protein [Shigella sp. D9]
gi|415798386|ref|ZP_11498404.1| alkylated DNA repair protein AlkB [Escherichia coli E128010]
gi|415876073|ref|ZP_11542646.1| alkylated DNA repair protein AlkB [Escherichia coli MS 79-10]
gi|417175716|ref|ZP_12005512.1| alkylated DNA repair protein AlkB [Escherichia coli 3.2608]
gi|417182854|ref|ZP_12009411.1| alkylated DNA repair protein AlkB [Escherichia coli 93.0624]
gi|417254168|ref|ZP_12045924.1| alkylated DNA repair protein AlkB [Escherichia coli 4.0967]
gi|417624110|ref|ZP_12274409.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_H.1.8]
gi|419290160|ref|ZP_13832252.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11A]
gi|419295487|ref|ZP_13837533.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11B]
gi|419300947|ref|ZP_13842946.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11C]
gi|419307079|ref|ZP_13848979.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11D]
gi|419312085|ref|ZP_13853947.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11E]
gi|419317496|ref|ZP_13859299.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12A]
gi|419323670|ref|ZP_13865363.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12B]
gi|419329635|ref|ZP_13871239.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12C]
gi|419335199|ref|ZP_13876732.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12D]
gi|419340666|ref|ZP_13882130.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12E]
gi|419870585|ref|ZP_14392678.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O103:H2 str. CVM9450]
gi|432806373|ref|ZP_20040301.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE91]
gi|432935007|ref|ZP_20134444.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE184]
gi|433194294|ref|ZP_20378284.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE90]
gi|192932015|gb|EDV84614.1| alkylated DNA repair protein AlkB [Escherichia coli E22]
gi|194414816|gb|EDX31087.1| alkylated DNA repair protein AlkB [Escherichia coli B171]
gi|257759962|dbj|BAI31459.1| oxidative demethylase AlkB [Escherichia coli O103:H2 str. 12009]
gi|291433160|gb|EFF06139.1| alkylated DNA repair protein [Escherichia coli B185]
gi|300529328|gb|EFK50390.1| alkylated DNA repair protein AlkB [Escherichia coli MS 107-1]
gi|323161678|gb|EFZ47561.1| alkylated DNA repair protein AlkB [Escherichia coli E128010]
gi|332100982|gb|EGJ04328.1| alkylated DNA repair protein [Shigella sp. D9]
gi|342929004|gb|EGU97726.1| alkylated DNA repair protein AlkB [Escherichia coli MS 79-10]
gi|345377071|gb|EGX09003.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_H.1.8]
gi|378129961|gb|EHW91331.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11A]
gi|378142574|gb|EHX03776.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11B]
gi|378149066|gb|EHX10199.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11D]
gi|378150563|gb|EHX11678.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11C]
gi|378157713|gb|EHX18744.1| alkylated DNA repair protein AlkB [Escherichia coli DEC11E]
gi|378164746|gb|EHX25687.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12B]
gi|378169079|gb|EHX29979.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12A]
gi|378169951|gb|EHX30837.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12C]
gi|378182278|gb|EHX42931.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12D]
gi|378187577|gb|EHX48188.1| alkylated DNA repair protein AlkB [Escherichia coli DEC12E]
gi|386178408|gb|EIH55887.1| alkylated DNA repair protein AlkB [Escherichia coli 3.2608]
gi|386184707|gb|EIH67446.1| alkylated DNA repair protein AlkB [Escherichia coli 93.0624]
gi|386216095|gb|EII32587.1| alkylated DNA repair protein AlkB [Escherichia coli 4.0967]
gi|388339386|gb|EIL05771.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O103:H2 str. CVM9450]
gi|431354515|gb|ELG41241.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE91]
gi|431453175|gb|ELH33585.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE184]
gi|431715744|gb|ELJ79889.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE90]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|427805351|ref|ZP_18972418.1| DNA repair system specific for alkylated DNA [Escherichia coli
chi7122]
gi|427809909|ref|ZP_18976974.1| DNA repair system specific for alkylated DNA [Escherichia coli]
gi|443618292|ref|YP_007382148.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
APEC O78]
gi|412963533|emb|CCK47458.1| DNA repair system specific for alkylated DNA [Escherichia coli
chi7122]
gi|412970088|emb|CCJ44731.1| DNA repair system specific for alkylated DNA [Escherichia coli]
gi|443422800|gb|AGC87704.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
APEC O78]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPWP----------AMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|170019474|ref|YP_001724428.1| alkylated DNA repair protein AlkB [Escherichia coli ATCC 8739]
gi|187731684|ref|YP_001879442.1| alkylated DNA repair protein AlkB [Shigella boydii CDC 3083-94]
gi|188495617|ref|ZP_03002887.1| alkylated DNA repair protein AlkB [Escherichia coli 53638]
gi|301022448|ref|ZP_07186328.1| alkylated DNA repair protein AlkB [Escherichia coli MS 69-1]
gi|386705471|ref|YP_006169318.1| Alkylated DNA repair protein AlkB [Escherichia coli P12b]
gi|417231309|ref|ZP_12032707.1| alkylated DNA repair protein AlkB [Escherichia coli 5.0959]
gi|419920630|ref|ZP_14438742.1| 2OG-Fe(II) oxygenase [Escherichia coli KD2]
gi|422972192|ref|ZP_16975244.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
TA124]
gi|432543823|ref|ZP_19780666.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE236]
gi|432549313|ref|ZP_19786081.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE237]
gi|432602772|ref|ZP_19839016.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE66]
gi|432622462|ref|ZP_19858493.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE76]
gi|432661450|ref|ZP_19897094.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE111]
gi|432851502|ref|ZP_20081887.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE144]
gi|169754402|gb|ACA77101.1| alkylated DNA repair protein AlkB [Escherichia coli ATCC 8739]
gi|187428676|gb|ACD07950.1| alkylated DNA repair protein AlkB [Shigella boydii CDC 3083-94]
gi|188490816|gb|EDU65919.1| alkylated DNA repair protein AlkB [Escherichia coli 53638]
gi|300397521|gb|EFJ81059.1| alkylated DNA repair protein AlkB [Escherichia coli MS 69-1]
gi|371598073|gb|EHN86888.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
TA124]
gi|383103639|gb|AFG41148.1| Alkylated DNA repair protein AlkB [Escherichia coli P12b]
gi|386204308|gb|EII08819.1| alkylated DNA repair protein AlkB [Escherichia coli 5.0959]
gi|388384514|gb|EIL46243.1| 2OG-Fe(II) oxygenase [Escherichia coli KD2]
gi|431074233|gb|ELD81797.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE236]
gi|431079591|gb|ELD86545.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE237]
gi|431141346|gb|ELE43111.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE66]
gi|431159262|gb|ELE59819.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE76]
gi|431199187|gb|ELE97940.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE111]
gi|431399840|gb|ELG83230.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE144]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|437199164|ref|ZP_20711478.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
13183-1]
gi|435220476|gb|ELO02764.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
13183-1]
Length = 201
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 96 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPLQ 151
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 152 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 196
>gi|432793426|ref|ZP_20027510.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE78]
gi|432799384|ref|ZP_20033406.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE79]
gi|431339089|gb|ELG26151.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE78]
gi|431343250|gb|ELG30214.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE79]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTSDCRYNLTFRQ 211
>gi|307311214|ref|ZP_07590858.1| alkylated DNA repair protein AlkB [Escherichia coli W]
gi|378712339|ref|YP_005277232.1| alkylated DNA repair protein AlkB [Escherichia coli KO11FL]
gi|386609603|ref|YP_006125089.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli W]
gi|386700801|ref|YP_006164638.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KO11FL]
gi|386710087|ref|YP_006173808.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli W]
gi|306908720|gb|EFN39217.1| alkylated DNA repair protein AlkB [Escherichia coli W]
gi|315061520|gb|ADT75847.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli W]
gi|323377900|gb|ADX50168.1| alkylated DNA repair protein AlkB [Escherichia coli KO11FL]
gi|383392328|gb|AFH17286.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KO11FL]
gi|383405779|gb|AFH12022.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli W]
Length = 216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+I+GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVIWGGESRLFYHGIQPLKAGFHP-------LTGDCRYNLTFRQ 211
>gi|432862806|ref|ZP_20087095.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE146]
gi|431404845|gb|ELG88091.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE146]
Length = 216
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTADCRYNLTFRQ 211
>gi|432481584|ref|ZP_19723541.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE210]
gi|431006956|gb|ELD21925.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE210]
Length = 216
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|300903592|ref|ZP_07121512.1| alkylated DNA repair protein AlkB [Escherichia coli MS 84-1]
gi|301306556|ref|ZP_07212619.1| alkylated DNA repair protein AlkB [Escherichia coli MS 124-1]
gi|415863941|ref|ZP_11537092.1| alkylated DNA repair protein AlkB [Escherichia coli MS 85-1]
gi|417154894|ref|ZP_11993023.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0497]
gi|417581739|ref|ZP_12232541.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_B2F1]
gi|417639966|ref|ZP_12290107.1| alkylated DNA repair protein AlkB [Escherichia coli TX1999]
gi|419170886|ref|ZP_13714772.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7A]
gi|419181531|ref|ZP_13725144.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7C]
gi|419186972|ref|ZP_13730486.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7D]
gi|419192263|ref|ZP_13735716.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7E]
gi|419278715|ref|ZP_13820962.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10E]
gi|419376148|ref|ZP_13917172.1| alkylated DNA repair protein AlkB [Escherichia coli DEC14B]
gi|419392308|ref|ZP_13933120.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15A]
gi|419397349|ref|ZP_13938117.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15B]
gi|419402690|ref|ZP_13943414.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15C]
gi|419407808|ref|ZP_13948497.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15D]
gi|419413395|ref|ZP_13954047.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15E]
gi|419862573|ref|ZP_14385167.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O103:H25 str. CVM9340]
gi|420386277|ref|ZP_14885627.1| alkylated DNA repair protein AlkB [Escherichia coli EPECa12]
gi|422777505|ref|ZP_16831157.1| alkylated DNA repair protein AlkB [Escherichia coli H120]
gi|425289222|ref|ZP_18680070.1| alkylated DNA repair protein AlkB [Escherichia coli 3006]
gi|432526989|ref|ZP_19764082.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE233]
gi|433130784|ref|ZP_20316219.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE163]
gi|433135446|ref|ZP_20320790.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE166]
gi|300404395|gb|EFJ87933.1| alkylated DNA repair protein AlkB [Escherichia coli MS 84-1]
gi|300838216|gb|EFK65976.1| alkylated DNA repair protein AlkB [Escherichia coli MS 124-1]
gi|315255146|gb|EFU35114.1| alkylated DNA repair protein AlkB [Escherichia coli MS 85-1]
gi|323945028|gb|EGB41093.1| alkylated DNA repair protein AlkB [Escherichia coli H120]
gi|345337510|gb|EGW69942.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_B2F1]
gi|345392968|gb|EGX22746.1| alkylated DNA repair protein AlkB [Escherichia coli TX1999]
gi|378014930|gb|EHV77827.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7A]
gi|378023164|gb|EHV85841.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7C]
gi|378028964|gb|EHV91580.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7D]
gi|378038327|gb|EHW00842.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7E]
gi|378128140|gb|EHW89525.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10E]
gi|378218871|gb|EHX79140.1| alkylated DNA repair protein AlkB [Escherichia coli DEC14B]
gi|378237508|gb|EHX97531.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15A]
gi|378243470|gb|EHY03416.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15B]
gi|378247224|gb|EHY07143.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15C]
gi|378254187|gb|EHY14051.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15D]
gi|378258827|gb|EHY18643.1| alkylated DNA repair protein AlkB [Escherichia coli DEC15E]
gi|386167983|gb|EIH34499.1| alkylated DNA repair protein AlkB [Escherichia coli 96.0497]
gi|388344713|gb|EIL10537.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O103:H25 str. CVM9340]
gi|391304987|gb|EIQ62782.1| alkylated DNA repair protein AlkB [Escherichia coli EPECa12]
gi|408213774|gb|EKI38253.1| alkylated DNA repair protein AlkB [Escherichia coli 3006]
gi|431063248|gb|ELD72497.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE233]
gi|431645581|gb|ELJ13125.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE163]
gi|431656124|gb|ELJ23145.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE166]
Length = 216
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPWP----------AMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|168236439|ref|ZP_02661497.1| alpha-ketoglutarate-dependent dioxygenase AlkB (Alkylated DNA
repair protein alkB) [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194735473|ref|YP_002115337.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|416421232|ref|ZP_11689345.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416434728|ref|ZP_11697852.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416437820|ref|ZP_11699029.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416442717|ref|ZP_11702478.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416449934|ref|ZP_11707078.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416456086|ref|ZP_11711150.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416470368|ref|ZP_11718823.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416478770|ref|ZP_11721888.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416486136|ref|ZP_11725016.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416497030|ref|ZP_11729463.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416506962|ref|ZP_11735104.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416513917|ref|ZP_11738093.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416530285|ref|ZP_11744851.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416532895|ref|ZP_11745904.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416544112|ref|ZP_11752681.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416554273|ref|ZP_11758181.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416557141|ref|ZP_11759323.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416567036|ref|ZP_11764163.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|416575207|ref|ZP_11768299.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416582570|ref|ZP_11772769.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416590214|ref|ZP_11777609.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416596814|ref|ZP_11781629.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416604074|ref|ZP_11785935.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416611018|ref|ZP_11790511.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416617644|ref|ZP_11794270.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416630543|ref|ZP_11800792.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416638584|ref|ZP_11804053.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416649347|ref|ZP_11809820.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|416657431|ref|ZP_11813689.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416665187|ref|ZP_11816512.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416674127|ref|ZP_11821195.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416690273|ref|ZP_11825815.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416703545|ref|ZP_11829641.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416711755|ref|ZP_11835535.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416715673|ref|ZP_11838312.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416722424|ref|ZP_11843356.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416730571|ref|ZP_11848710.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|416740585|ref|ZP_11854508.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|416751232|ref|ZP_11860042.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|416754094|ref|ZP_11861118.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416760675|ref|ZP_11864963.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|416769282|ref|ZP_11870972.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|417384391|ref|ZP_12149782.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Johannesburg str.
S5-703]
gi|417476461|ref|ZP_12170977.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Rubislaw str. A4-653]
gi|417532423|ref|ZP_12186809.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Urbana str. R8-2977]
gi|418483333|ref|ZP_13052343.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418490273|ref|ZP_13056821.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035278]
gi|418497053|ref|ZP_13063474.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035318]
gi|418501788|ref|ZP_13068167.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035320]
gi|418506124|ref|ZP_13072462.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035321]
gi|418507728|ref|ZP_13074037.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035327]
gi|418511594|ref|ZP_13077845.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Pomona str. ATCC 10729]
gi|418526291|ref|ZP_13092269.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008286]
gi|194710975|gb|ACF90196.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197290530|gb|EDY29885.1| alpha-ketoglutarate-dependent dioxygenase AlkB (Alkylated DNA
repair protein alkB) [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|322617017|gb|EFY13923.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322617677|gb|EFY14576.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322624693|gb|EFY21522.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322630242|gb|EFY27012.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322634423|gb|EFY31156.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322639133|gb|EFY35825.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322640130|gb|EFY36796.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322645782|gb|EFY42306.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322651557|gb|EFY47932.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322656118|gb|EFY52417.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322659470|gb|EFY55717.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322665932|gb|EFY62115.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322669830|gb|EFY65971.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322673815|gb|EFY69912.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322678573|gb|EFY74629.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322683631|gb|EFY79645.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322687707|gb|EFY83677.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323196196|gb|EFZ81353.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323198364|gb|EFZ83466.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323204198|gb|EFZ89209.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323212351|gb|EFZ97174.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323218243|gb|EGA02953.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323222999|gb|EGA07348.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323227434|gb|EGA11599.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323232238|gb|EGA16341.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323235729|gb|EGA19813.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323241111|gb|EGA25147.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323244853|gb|EGA28855.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323248564|gb|EGA32495.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323251584|gb|EGA35452.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323255016|gb|EGA38806.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323263089|gb|EGA46635.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323268149|gb|EGA51626.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323270758|gb|EGA54196.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|353609067|gb|EHC62476.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Johannesburg str.
S5-703]
gi|353640832|gb|EHC85712.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Rubislaw str. A4-653]
gi|353662782|gb|EHD01672.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Urbana str. R8-2977]
gi|363551030|gb|EHL35351.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363554505|gb|EHL38741.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363561558|gb|EHL45674.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363567059|gb|EHL51067.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363568848|gb|EHL52814.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363579082|gb|EHL62880.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|363579386|gb|EHL63177.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|366054857|gb|EHN19200.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035318]
gi|366061913|gb|EHN26157.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366065859|gb|EHN30045.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035320]
gi|366066197|gb|EHN30372.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035321]
gi|366066387|gb|EHN30556.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035278]
gi|366080496|gb|EHN44465.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035327]
gi|366084444|gb|EHN48352.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Pomona str. ATCC 10729]
gi|366829103|gb|EHN55982.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|372205847|gb|EHP19353.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008286]
Length = 216
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAIFQFGGLRRSDPLQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|24113597|ref|NP_708107.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Shigella flexneri
2a str. 301]
gi|30063651|ref|NP_837822.1| alkylated DNA repair protein [Shigella flexneri 2a str. 2457T]
gi|82544554|ref|YP_408501.1| AlkB [Shigella boydii Sb227]
gi|110806186|ref|YP_689706.1| alkylated DNA repair protein [Shigella flexneri 5 str. 8401]
gi|384543876|ref|YP_005727939.1| Alkylated DNA repair protein [Shigella flexneri 2002017]
gi|415853349|ref|ZP_11529358.1| alkylated DNA repair protein AlkB [Shigella flexneri 2a str. 2457T]
gi|417713246|ref|ZP_12362213.1| alkylated DNA repair protein AlkB [Shigella flexneri K-272]
gi|417718087|ref|ZP_12366988.1| alkylated DNA repair protein AlkB [Shigella flexneri K-227]
gi|417723863|ref|ZP_12372668.1| alkylated DNA repair protein AlkB [Shigella flexneri K-304]
gi|417729133|ref|ZP_12377831.1| alkylated DNA repair protein AlkB [Shigella flexneri K-671]
gi|417734498|ref|ZP_12383149.1| alkylated DNA repair protein AlkB [Shigella flexneri 2747-71]
gi|417739045|ref|ZP_12387625.1| alkylated DNA repair protein AlkB [Shigella flexneri 4343-70]
gi|417828604|ref|ZP_12475157.1| alkylated DNA repair protein AlkB [Shigella flexneri J1713]
gi|418257179|ref|ZP_12880863.1| alkylated DNA repair protein AlkB [Shigella flexneri 6603-63]
gi|420321091|ref|ZP_14822921.1| alkylated DNA repair protein AlkB [Shigella flexneri 2850-71]
gi|420340932|ref|ZP_14842441.1| alkylated DNA repair protein AlkB [Shigella flexneri K-404]
gi|424838589|ref|ZP_18263226.1| alkylated DNA repair protein [Shigella flexneri 5a str. M90T]
gi|24052651|gb|AAN43814.1| alkylated DNA repair protein [Shigella flexneri 2a str. 301]
gi|30041904|gb|AAP17631.1| alkylated DNA repair protein [Shigella flexneri 2a str. 2457T]
gi|81245965|gb|ABB66673.1| AlkB [Shigella boydii Sb227]
gi|110615734|gb|ABF04401.1| DNA repair system specific for alkylated DNA [Shigella flexneri 5
str. 8401]
gi|281601662|gb|ADA74646.1| Alkylated DNA repair protein [Shigella flexneri 2002017]
gi|313651326|gb|EFS15724.1| alkylated DNA repair protein AlkB [Shigella flexneri 2a str. 2457T]
gi|332754856|gb|EGJ85221.1| alkylated DNA repair protein AlkB [Shigella flexneri 4343-70]
gi|332755258|gb|EGJ85622.1| alkylated DNA repair protein AlkB [Shigella flexneri K-671]
gi|332756572|gb|EGJ86923.1| alkylated DNA repair protein AlkB [Shigella flexneri 2747-71]
gi|333002937|gb|EGK22493.1| alkylated DNA repair protein AlkB [Shigella flexneri K-272]
gi|333016721|gb|EGK36050.1| alkylated DNA repair protein AlkB [Shigella flexneri K-304]
gi|333016942|gb|EGK36266.1| alkylated DNA repair protein AlkB [Shigella flexneri K-227]
gi|335574980|gb|EGM61292.1| alkylated DNA repair protein AlkB [Shigella flexneri J1713]
gi|383467641|gb|EID62662.1| alkylated DNA repair protein [Shigella flexneri 5a str. M90T]
gi|391248384|gb|EIQ07626.1| alkylated DNA repair protein AlkB [Shigella flexneri 2850-71]
gi|391271462|gb|EIQ30336.1| alkylated DNA repair protein AlkB [Shigella flexneri K-404]
gi|397897332|gb|EJL13741.1| alkylated DNA repair protein AlkB [Shigella flexneri 6603-63]
Length = 216
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|213425960|ref|ZP_03358710.1| AlkB protein [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
Length = 258
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPLQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|331668918|ref|ZP_08369766.1| alpha-ketoglutarate-dependent dioxygenase AlkB (Alkylated DNA
repair protein alkB) [Escherichia coli TA271]
gi|331064112|gb|EGI36023.1| alpha-ketoglutarate-dependent dioxygenase AlkB (Alkylated DNA
repair protein alkB) [Escherichia coli TA271]
Length = 179
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 45 DPQTNK----------PWPAMPQSFHDLCQRAATAAG---------------YPDFQPDA 79
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 80 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 135
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 136 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTGDCRYNLTFRQ 174
>gi|270262645|ref|ZP_06190916.1| 2OG-Fe(II) oxygenase [Serratia odorifera 4Rx13]
gi|386824483|ref|ZP_10111617.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Serratia plymuthica
PRI-2C]
gi|421784419|ref|ZP_16220859.1| alkylated DNA repair protein AlkB [Serratia plymuthica A30]
gi|270043329|gb|EFA16422.1| 2OG-Fe(II) oxygenase [Serratia odorifera 4Rx13]
gi|386378583|gb|EIJ19386.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Serratia plymuthica
PRI-2C]
gi|407753431|gb|EKF63574.1| alkylated DNA repair protein AlkB [Serratia plymuthica A30]
Length = 215
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 28/183 (15%)
Query: 277 GAKLRLRMMCLGLDWDPQTR--KYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMD 334
G + + M G W +R +Y ++ G IP+ F L + +A
Sbjct: 57 GHVMSVAMSWCGNGWSSDSRGYRYSERDSRSGKRWPPIPAIFMALADEAAQQAG------ 110
Query: 335 SKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFL 394
PD C++N Y+ +L LHQD+DE + G P+VS S+G A F
Sbjct: 111 ---------FAPFVPDSCLINRYDPGSKLSLHQDKDEHDF----GSPIVSVSLGLPAVFQ 157
Query: 395 YGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLT 454
+G + +++A+++ L GDV+++GG SR FHG+ I ++++ P R+N+T
Sbjct: 158 FGGMQRSDRAQRIPLAHGDVVVWGGPSRLCFHGIMPIKEG-------YHSLVGPHRINIT 210
Query: 455 FRQ 457
R+
Sbjct: 211 LRK 213
>gi|91211504|ref|YP_541490.1| AlkB repair system protein for alkylated DNA and RNA [Escherichia
coli UTI89]
gi|117624406|ref|YP_853319.1| AlkB repair system protein for alkylated DNA and RNA [Escherichia
coli APEC O1]
gi|218559130|ref|YP_002392043.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli S88]
gi|237704687|ref|ZP_04535168.1| AlkB repair system protein for alkylated DNA and RNA [Escherichia
sp. 3_2_53FAA]
gi|386600092|ref|YP_006101598.1| alkylated DNA repair protein AlkB [Escherichia coli IHE3034]
gi|386603765|ref|YP_006110065.1| 2OG-Fe(II) oxygenase [Escherichia coli UM146]
gi|386619833|ref|YP_006139413.1| Alkylated DNA repair protein [Escherichia coli NA114]
gi|387830147|ref|YP_003350084.1| DNA repair protein [Escherichia coli SE15]
gi|417085476|ref|ZP_11952904.1| AlkB repair system protein for alkylated DNA and RNA [Escherichia
coli cloneA_i1]
gi|419914466|ref|ZP_14432864.1| 2OG-Fe(II) oxygenase [Escherichia coli KD1]
gi|419947144|ref|ZP_14463504.1| 2OG-Fe(II) oxygenase [Escherichia coli HM605]
gi|422360350|ref|ZP_16440984.1| alkylated DNA repair protein AlkB [Escherichia coli MS 110-3]
gi|422749491|ref|ZP_16803403.1| alkylated DNA repair protein AlkB [Escherichia coli H252]
gi|422755636|ref|ZP_16809460.1| alkylated DNA repair protein AlkB [Escherichia coli H263]
gi|422837733|ref|ZP_16885706.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
H397]
gi|432358557|ref|ZP_19601783.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE4]
gi|432363290|ref|ZP_19606457.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE5]
gi|432422560|ref|ZP_19665105.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE178]
gi|432500699|ref|ZP_19742456.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE216]
gi|432559463|ref|ZP_19796132.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE49]
gi|432574292|ref|ZP_19810772.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE55]
gi|432588540|ref|ZP_19824896.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE58]
gi|432598199|ref|ZP_19834475.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE62]
gi|432695074|ref|ZP_19930273.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE162]
gi|432711264|ref|ZP_19946324.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE6]
gi|432755027|ref|ZP_19989577.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE22]
gi|432779152|ref|ZP_20013395.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE59]
gi|432788099|ref|ZP_20022231.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE65]
gi|432821548|ref|ZP_20055240.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE118]
gi|432827680|ref|ZP_20061332.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE123]
gi|432895230|ref|ZP_20106950.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE165]
gi|432919677|ref|ZP_20123791.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE173]
gi|432927579|ref|ZP_20129008.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE175]
gi|432981641|ref|ZP_20170416.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE211]
gi|433005670|ref|ZP_20194099.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE227]
gi|433008253|ref|ZP_20196670.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE229]
gi|433097083|ref|ZP_20283267.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE139]
gi|433106505|ref|ZP_20292480.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE148]
gi|433154332|ref|ZP_20339275.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE176]
gi|433164087|ref|ZP_20348825.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE179]
gi|433169192|ref|ZP_20353820.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE180]
gi|91073078|gb|ABE07959.1| AlkB repair system protein for alkylated DNA and RNA [Escherichia
coli UTI89]
gi|115513530|gb|ABJ01605.1| AlkB repair system protein for alkylated DNA and RNA [Escherichia
coli APEC O1]
gi|218365899|emb|CAR03641.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli S88]
gi|226901053|gb|EEH87312.1| AlkB repair system protein for alkylated DNA and RNA [Escherichia
sp. 3_2_53FAA]
gi|281179304|dbj|BAI55634.1| DNA repair protein [Escherichia coli SE15]
gi|294493322|gb|ADE92078.1| alkylated DNA repair protein AlkB [Escherichia coli IHE3034]
gi|307626249|gb|ADN70553.1| 2OG-Fe(II) oxygenase [Escherichia coli UM146]
gi|315285834|gb|EFU45274.1| alkylated DNA repair protein AlkB [Escherichia coli MS 110-3]
gi|323952006|gb|EGB47880.1| alkylated DNA repair protein AlkB [Escherichia coli H252]
gi|323955980|gb|EGB51733.1| alkylated DNA repair protein AlkB [Escherichia coli H263]
gi|333970334|gb|AEG37139.1| Alkylated DNA repair protein [Escherichia coli NA114]
gi|355351248|gb|EHG00440.1| AlkB repair system protein for alkylated DNA and RNA [Escherichia
coli cloneA_i1]
gi|371610642|gb|EHN99170.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
H397]
gi|388386737|gb|EIL48377.1| 2OG-Fe(II) oxygenase [Escherichia coli KD1]
gi|388411452|gb|EIL71628.1| 2OG-Fe(II) oxygenase [Escherichia coli HM605]
gi|430877212|gb|ELC00668.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE4]
gi|430886509|gb|ELC09364.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE5]
gi|430944172|gb|ELC64271.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE178]
gi|431028276|gb|ELD41320.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE216]
gi|431090683|gb|ELD96434.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE49]
gi|431107890|gb|ELE12054.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE55]
gi|431120873|gb|ELE23871.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE58]
gi|431131066|gb|ELE33149.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE62]
gi|431233656|gb|ELF29243.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE162]
gi|431248944|gb|ELF43119.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE6]
gi|431302236|gb|ELF91424.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE22]
gi|431327305|gb|ELG14650.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE59]
gi|431337816|gb|ELG24904.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE65]
gi|431368395|gb|ELG54863.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE118]
gi|431372929|gb|ELG58591.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE123]
gi|431421597|gb|ELH03809.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE165]
gi|431443721|gb|ELH24747.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE173]
gi|431444102|gb|ELH25126.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE175]
gi|431490950|gb|ELH70557.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE211]
gi|431514657|gb|ELH92498.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE227]
gi|431523583|gb|ELI00720.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE229]
gi|431615431|gb|ELI84560.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE139]
gi|431627212|gb|ELI95623.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE148]
gi|431674222|gb|ELJ40405.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE176]
gi|431687392|gb|ELJ52943.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE179]
gi|431688044|gb|ELJ53585.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE180]
Length = 216
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHHLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYVPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKVGGHP-------LTTDCRYNLTFRQ 211
>gi|420391944|ref|ZP_14891197.1| alkylated DNA repair protein AlkB [Escherichia coli EPEC C342-62]
gi|425423031|ref|ZP_18804199.1| alkylated DNA repair protein AlkB [Escherichia coli 0.1288]
gi|391312625|gb|EIQ70233.1| alkylated DNA repair protein AlkB [Escherichia coli EPEC C342-62]
gi|408343586|gb|EKJ57980.1| alkylated DNA repair protein AlkB [Escherichia coli 0.1288]
Length = 215
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 81 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 115
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 116 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 171
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 172 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 210
>gi|387607904|ref|YP_006096760.1| alpha-ketoglutarate-dependent dioxygenase (alkylated DNA repair
protein) [Escherichia coli 042]
gi|284922204|emb|CBG35286.1| alpha-ketoglutarate-dependent dioxygenase (alkylated DNA repair
protein) [Escherichia coli 042]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTADCRYNLTFRQ 211
>gi|94312699|ref|YP_585908.1| alpha-ketoglutarate-dependent dioxygenase alkB [Cupriavidus
metallidurans CH34]
gi|93356551|gb|ABF10639.1| alkylated DNA repair protein alk [Cupriavidus metallidurans CH34]
Length = 194
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 286 CLGLDWDPQTRKYGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVED 342
C L W R Y + VD G V+P F +L + +EA +D
Sbjct: 45 CGALGWTTDRRGY-RYTTVDPDTGKPWPVMPEVFFRLANEAAAEA-----------GFDD 92
Query: 343 ILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDAN 402
PD C++N Y RL LHQD++E Y P+VS S+G A FL+G
Sbjct: 93 ----FEPDACLLNRYLPGSRLALHQDKNEQAYET----PIVSVSLGMRATFLFGGHARTA 144
Query: 403 KAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
KV L GDV+++GG R +HGV I AP ALL + R+N TFR+
Sbjct: 145 PTIKVPLHHGDVVVWGGADRLRYHGVMPI--KDAPHALLGSQ-----RINFTFRK 192
>gi|418997415|ref|ZP_13545009.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1A]
gi|377843242|gb|EHU08282.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1A]
Length = 215
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 81 DPQTNKPW----------PAMPQSFHHLCQRAATAAG---------------YPDFQPDA 115
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 116 CLINRYVPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 171
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 172 GDVVVWGGESRLFYHGIQPLKVGGHP-------LTTDCRYNLTFRQ 210
>gi|194435998|ref|ZP_03068100.1| alkylated DNA repair protein AlkB [Escherichia coli 101-1]
gi|251785575|ref|YP_002999879.1| AlkB repair system for alkylated DNA and RNA [Escherichia coli
BL21(DE3)]
gi|253772863|ref|YP_003035694.1| alkylated DNA repair protein AlkB [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162224|ref|YP_003045332.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli B str. REL606]
gi|254288985|ref|YP_003054733.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli BL21(DE3)]
gi|300931443|ref|ZP_07146772.1| alkylated DNA repair protein AlkB [Escherichia coli MS 187-1]
gi|386614824|ref|YP_006134490.1| alkylated DNA repair protein AlkB [Escherichia coli UMNK88]
gi|421778119|ref|ZP_16214702.1| alkylated DNA repair protein AlkB [Escherichia coli AD30]
gi|422786829|ref|ZP_16839568.1| alkylated DNA repair protein AlkB [Escherichia coli H489]
gi|422790533|ref|ZP_16843237.1| alkylated DNA repair protein AlkB [Escherichia coli TA007]
gi|432534487|ref|ZP_19771462.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE234]
gi|432576491|ref|ZP_19812951.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE56]
gi|432875851|ref|ZP_20094011.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE154]
gi|442598013|ref|ZP_21015787.1| Alkylated DNA repair protein AlkB [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
gi|194424726|gb|EDX40711.1| alkylated DNA repair protein AlkB [Escherichia coli 101-1]
gi|242377848|emb|CAQ32615.1| AlkB repair system for alkylated DNA and RNA [Escherichia coli
BL21(DE3)]
gi|253323907|gb|ACT28509.1| alkylated DNA repair protein AlkB [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974125|gb|ACT39796.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli B str. REL606]
gi|253978292|gb|ACT43962.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli BL21(DE3)]
gi|300460813|gb|EFK24306.1| alkylated DNA repair protein AlkB [Escherichia coli MS 187-1]
gi|323961518|gb|EGB57126.1| alkylated DNA repair protein AlkB [Escherichia coli H489]
gi|323973087|gb|EGB68281.1| alkylated DNA repair protein AlkB [Escherichia coli TA007]
gi|332343993|gb|AEE57327.1| alkylated DNA repair protein AlkB [Escherichia coli UMNK88]
gi|408456792|gb|EKJ80600.1| alkylated DNA repair protein AlkB [Escherichia coli AD30]
gi|431060123|gb|ELD69457.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE234]
gi|431114526|gb|ELE18054.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE56]
gi|431420123|gb|ELH02455.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE154]
gi|441653287|emb|CCQ01490.1| Alkylated DNA repair protein AlkB [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|417756473|ref|ZP_12404548.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2B]
gi|377873889|gb|EHU38520.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2B]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHHLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYVPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKVGGHP-------LTTDCRYNLTFRQ 211
>gi|194446292|ref|YP_002041526.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|418805228|ref|ZP_13360816.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418813955|ref|ZP_13369475.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418814439|ref|ZP_13369953.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21538]
gi|418819404|ref|ZP_13374855.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22425]
gi|418828637|ref|ZP_13383660.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|418829336|ref|ZP_13384318.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418838547|ref|ZP_13393391.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418839235|ref|ZP_13394072.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418847224|ref|ZP_13401986.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|418852196|ref|ZP_13406901.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418856570|ref|ZP_13411212.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|418858688|ref|ZP_13413300.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418864993|ref|ZP_13419508.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|194404955|gb|ACF65177.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|392772289|gb|EJA28990.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392784929|gb|EJA41510.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392789458|gb|EJA45972.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|392794233|gb|EJA50656.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21538]
gi|392794695|gb|EJA51087.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22425]
gi|392796060|gb|EJA52410.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392804567|gb|EJA60724.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392808987|gb|EJA65034.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392812946|gb|EJA68921.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392815726|gb|EJA71662.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392819079|gb|EJA74952.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|392829079|gb|EJA84760.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|392831946|gb|EJA87571.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P++S S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIISVSLGVPAVFQFGGLRRSDPIQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|83941926|ref|ZP_00954388.1| alkylated DNA repair protein, putative [Sulfitobacter sp. EE-36]
gi|83847746|gb|EAP85621.1| alkylated DNA repair protein, putative [Sulfitobacter sp. EE-36]
Length = 200
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 34/221 (15%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--DPQT 295
G + K YLT+ Q ++ + + K F++P G ++ +RM G W D Q
Sbjct: 8 GFEIHKSYLTLSAQRGLLDAVRGVVKQVP-FFRPVMPSGQQMSVRMTSAGDYGWLSDTQG 66
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y +G IP E ++ + + ++ +E P+ C++N
Sbjct: 67 YRYAPTHP-NGTPWPAIPPE--------------VLAIWNDLTGLER-----QPESCLIN 106
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVL 415
+Y + ++GLHQD++E+ + PVVS S+GD G + K + + L+SGDV+
Sbjct: 107 YYASDAKMGLHQDKNETDFRW----PVVSISLGDEGMLRVGGQTRGGKTDSLWLQSGDVV 162
Query: 416 IFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ GGE+R +HG+ I S+ + + GR+N+T R
Sbjct: 163 VMGGEARLNYHGIDRIRAGSS------TLLPKGGRINITLR 197
>gi|56412838|ref|YP_149913.1| AlkB protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. ATCC 9150]
gi|197361771|ref|YP_002141407.1| AlkB protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. AKU_12601]
gi|198242580|ref|YP_002216334.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|375119817|ref|ZP_09764984.1| AlkB protein [Salmonella enterica subsp. enterica serovar Dublin
str. SD3246]
gi|445147354|ref|ZP_21388110.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Dublin str. SL1438]
gi|445157826|ref|ZP_21392970.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Dublin str. HWS51]
gi|56127095|gb|AAV76601.1| AlkB protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. ATCC 9150]
gi|197093247|emb|CAR58692.1| AlkB protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. AKU_12601]
gi|197937096|gb|ACH74429.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|326624084|gb|EGE30429.1| AlkB protein [Salmonella enterica subsp. enterica serovar Dublin
str. SD3246]
gi|444844897|gb|ELX70123.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Dublin str. SL1438]
gi|444845907|gb|ELX71089.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Dublin str. HWS51]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 33/226 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG V+L+ + Q L+ I + P F Q G + + M C L W D
Sbjct: 15 LAPGAVVLRRFAFRAAQSLLDDIGFVASQSP--FRQMVTPGGYTMSVAMTNCGALGWTTD 72
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLV-QRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
Y + + +P F + Q +++ +A + PD
Sbjct: 73 RHGYCYAVRDPLTDKPWPALPLSFASVCRQAAIAAGYA----------------SFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P++S S+G A F +G R ++ +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIISVSLGVPAVFQFGGLRRSDPIQRILLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 173 GDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|419233059|ref|ZP_13775836.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9B]
gi|419267747|ref|ZP_13810102.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10C]
gi|419273326|ref|ZP_13815625.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10D]
gi|378077586|gb|EHW39580.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9B]
gi|378111575|gb|EHW73159.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10C]
gi|378116783|gb|EHW78303.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10D]
Length = 229
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNK----------PWPAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTGDCRYNLTFRQ 211
>gi|417540516|ref|ZP_12192521.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Wandsworth str. A4-580]
gi|353662540|gb|EHD01507.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Wandsworth str. A4-580]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R + +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSGPIQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|268589554|ref|ZP_06123775.1| alkylated DNA repair protein AlkB [Providencia rettgeri DSM 1131]
gi|291315221|gb|EFE55674.1| alkylated DNA repair protein AlkB [Providencia rettgeri DSM 1131]
Length = 214
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDW---- 291
+ P LLK +L + L+ + + P +G ++ M G DW
Sbjct: 15 IAPEAFLLKGFLLGQSDALLQSLSNVITANP--LRHMATPNGYQMSAAMTNCG-DWGWVT 71
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
D + +Y ++ V +P F QL + S A E +P D
Sbjct: 72 DKKGYRYSQRDPVTNQPWQPMPISFVQLATSAASTA-----------GFEHFIP----DA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDE-RDANKAEKVLLE 410
C++N Y + LHQD+DE+ ++ P+VSFS+G F +G RDA K V LE
Sbjct: 117 CLINRYAVGAAMSLHQDKDEADFTH----PIVSFSLGLPTIFDFGGATRDAPKI-AVYLE 171
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDVL++GG SR +HGV I P +L P R NLTFR+
Sbjct: 172 HGDVLVWGGRSRLNYHGVRRIKSGVHP-------LLGPYRYNLTFRR 211
>gi|204929206|ref|ZP_03220349.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|452123903|ref|YP_007474151.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
gi|204321750|gb|EDZ06949.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|451912907|gb|AGF84713.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAIFQFGGLRRSDPLQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|419249760|ref|ZP_13792344.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9E]
gi|378095345|gb|EHW57133.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9E]
Length = 229
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNK----------PWPAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTGDCRYNLTFRQ 211
>gi|417324884|ref|ZP_12111021.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
gi|353577770|gb|EHC39831.1| Methylated-DNA-protein-cysteine methyltransferase [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P++S S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIISVSLGVPAVFQFGGLRRSDPIQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|222832662|gb|EEE71139.1| predicted protein [Populus trichocarpa]
Length = 214
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 286 CLGLDWDPQTRKYGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVED 342
C L W R Y + VD G V+P F +L + +EA +D
Sbjct: 65 CGALGWTTDRRGY-RYTTVDPDTGKPWPVMPEVFFRLANEAAAEA-----------GFDD 112
Query: 343 ILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDAN 402
PD C++N Y RL LHQD++E Y P+VS S+G A FL+G
Sbjct: 113 ----FEPDACLLNRYLPGSRLALHQDKNEQAYET----PIVSVSLGMRATFLFGGHARTA 164
Query: 403 KAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
KV L GDV+++GG R +HGV I AP ALL + R+N TFR+
Sbjct: 165 PTIKVPLHHGDVVVWGGADRLRYHGVMPI--KDAPHALLGSQ-----RINFTFRK 212
>gi|418787821|ref|ZP_13343621.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418794826|ref|ZP_13350542.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418800109|ref|ZP_13355773.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392760436|gb|EJA17273.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|392762739|gb|EJA19553.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392765346|gb|EJA22134.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P++S S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIISVSLGVPAVFQFGGLRRSDPIQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|432372889|ref|ZP_19615929.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE11]
gi|430895694|gb|ELC17949.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE11]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 78/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F+ L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQGFRDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYVPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTADCRYNLTFRQ 211
>gi|374311273|ref|YP_005057703.1| 2OG-Fe(II) oxygenase [Granulicella mallensis MP5ACTX8]
gi|358753283|gb|AEU36673.1| 2OG-Fe(II) oxygenase [Granulicella mallensis MP5ACTX8]
Length = 217
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 31/225 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG LL+ E +++ + + P F G ++ + M C L W D
Sbjct: 19 LGPGTALLRGLAQDHEALIMEALFAVAAESP--FRHMVTPGGFRMSVAMTNCGALGWVTD 76
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
+ +Y G +P F L Q++ + A P PD C
Sbjct: 77 SKGYRYASMDPETGGPWPAMPKVFMDLAQQAATLAG---------------YPTFIPDAC 121
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y RL LHQD++E+ ++ P+VS S+G A FL+G ++K ++ + G
Sbjct: 122 LINRYEPGARLTLHQDKNENDFAE----PIVSVSLGLPAVFLFGGLERSDKTIRLPIVHG 177
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
DVL++GG +R +HG++ + S P R NLTFR+
Sbjct: 178 DVLVWGGPARLCYHGINPLKKGSHPAT-------GGYRFNLTFRK 215
>gi|398995747|ref|ZP_10698619.1| alkylated DNA repair protein [Pseudomonas sp. GM21]
gi|398128908|gb|EJM18287.1| alkylated DNA repair protein [Pseudomonas sp. GM21]
Length = 221
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 77/173 (44%), Gaps = 28/173 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D KY + G +P F +L Q + EA
Sbjct: 72 CGDLGWTTDRSGYKYTRNDPQTGQPWPAMPEVFFELAQAAAREAG--------------- 116
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C++N Y R+ LHQDRDE Y+ P+VS S+G A FL+G ++K
Sbjct: 117 FPDFVPDSCLINRYVPGARMSLHQDRDEGSYAA----PIVSVSLGLPATFLFGGFERSDK 172
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ +V L GD++I+GG R +HGV I P L R+N TFR
Sbjct: 173 SRRVPLLHGDIVIWGGVDRLRYHGVLPIKDGHHP-------RLGEQRINFTFR 218
>gi|425899912|ref|ZP_18876503.1| alkylated DNA repair protein AlkB [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397889790|gb|EJL06272.1| alkylated DNA repair protein AlkB [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 224
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Query: 330 LIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGD 389
+++ ++ + + PD C++N Y R+ LHQD+DE Y + P+VS S+G
Sbjct: 106 VLRELARAAATQAGFAGFEPDACLINHYVPGARMSLHQDKDERDYDV----PIVSVSLGL 161
Query: 390 SAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG 449
A F G ER +++ +V L GDV+++GG R +HGV + + P +L P
Sbjct: 162 PAVFQLGGERRSDRPLRVPLLHGDVVVWGGVDRLRYHGVLPLKEGTHP-------LLGPR 214
Query: 450 RLNLTFRQ 457
R+NLTFR+
Sbjct: 215 RINLTFRR 222
>gi|389684449|ref|ZP_10175777.1| alkylated DNA repair protein AlkB [Pseudomonas chlororaphis O6]
gi|388551672|gb|EIM14937.1| alkylated DNA repair protein AlkB [Pseudomonas chlororaphis O6]
Length = 224
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D +Y G +P F++L Q + ++A
Sbjct: 75 CGELGWTTDRSGYRYTAIDPQSGQPWPAMPEVFRELAQAAATQAG--------------- 119
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
PD C++N Y R+ LHQD+DE Y P+VS S+G A F G ER +++
Sbjct: 120 FAGFDPDACLINHYVPGARMSLHQDKDERDYDA----PIVSVSLGLPAVFQLGGERRSDR 175
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+V L GDV+++GG R +HGV + + P +L P R+NLTFR+
Sbjct: 176 PLRVPLLHGDVVVWGGVDRLRYHGVLPLKDGTHP-------LLGPRRINLTFRR 222
>gi|218700680|ref|YP_002408309.1| N1-methyladenine or N3-methylcytosine DNA lesion oxidative
demethylase [Escherichia coli IAI39]
gi|300936762|ref|ZP_07151656.1| alkylated DNA repair protein AlkB [Escherichia coli MS 21-1]
gi|386624908|ref|YP_006144636.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O7:K1 str. CE10]
gi|432680823|ref|ZP_19916197.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE143]
gi|218370666|emb|CAR18475.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli IAI39]
gi|300458124|gb|EFK21617.1| alkylated DNA repair protein AlkB [Escherichia coli MS 21-1]
gi|349738645|gb|AEQ13351.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O7:K1 str. CE10]
gi|431220220|gb|ELF17600.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE143]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYVPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKVGGHP-------LTTDCRYNLTFRQ 211
>gi|82776184|ref|YP_402533.1| DNA repair system specific for alkylated DNA [Shigella dysenteriae
Sd197]
gi|309786613|ref|ZP_07681234.1| alkylated DNA repair protein AlkB [Shigella dysenteriae 1617]
gi|81240332|gb|ABB61042.1| DNA repair system specific for alkylated DNA [Shigella dysenteriae
Sd197]
gi|308925522|gb|EFP71008.1| alkylated DNA repair protein AlkB [Shigella dysenteriae 1617]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTGDCRYNLTFRQ 211
>gi|388567394|ref|ZP_10153828.1| hypothetical protein Q5W_2163 [Hydrogenophaga sp. PBC]
gi|388265416|gb|EIK90972.1| hypothetical protein Q5W_2163 [Hydrogenophaga sp. PBC]
Length = 214
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD C+VN Y RL LHQD++E Y+ P+VS S+G A FL+G + K
Sbjct: 113 FEPDACLVNRYTPGARLSLHQDKNERDYTA----PIVSVSLGMRATFLWGGLARSGPTLK 168
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V L GDV+++GG R +HGVS + P ALL + R NLTFRQ
Sbjct: 169 VALRHGDVVVWGGADRLRYHGVSPL--KDEPHALLGSQ-----RFNLTFRQ 212
>gi|126732879|ref|ZP_01748670.1| alkylated DNA repair protein, putative [Sagittula stellata E-37]
gi|126706655|gb|EBA05729.1| alkylated DNA repair protein, putative [Sagittula stellata E-37]
Length = 199
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C++N+Y R+GLHQD DE Y PV+S S+GD A F G E + V
Sbjct: 99 PECCLINWYAEDARMGLHQDVDEQDYDC----PVLSVSLGDDALFRMGGENRRDPTRSVW 154
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L SGD+++ G SR FHG+ + P ++ L + GRLNLT R
Sbjct: 155 LASGDLVLLTGPSRRAFHGIDRLRPGTS--TLFPDG----GRLNLTLR 196
>gi|86748824|ref|YP_485320.1| 2OG-Fe(II) oxygenase [Rhodopseudomonas palustris HaA2]
gi|86571852|gb|ABD06409.1| DNA-N1-methyladenine dioxygenase [Rhodopseudomonas palustris HaA2]
Length = 223
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 65/110 (59%), Gaps = 11/110 (10%)
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
+PD C++N Y ++ LHQD+DE ++ P+VS S+G A F +G ++K +
Sbjct: 123 TPDACLINRYAPGAKMALHQDKDEQDFAA----PIVSVSLGLPAVFQFGGMARSDKPRRF 178
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDVL++GGE+R V+HGV ++ E+ +L R+NLTFR+
Sbjct: 179 ELRHGDVLVWGGETRLVYHGVLALKDG-------EHPLLGRQRINLTFRK 221
>gi|419040368|ref|ZP_13587396.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2E]
gi|377890408|gb|EHU54865.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2E]
Length = 229
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNK----------PWPAMPQSFHHLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYVPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKVGVHP-------LTTDCRYNLTFRQ 211
>gi|415840604|ref|ZP_11522032.1| alkylated DNA repair protein AlkB [Escherichia coli RN587/1]
gi|417282605|ref|ZP_12069905.1| alkylated DNA repair protein AlkB [Escherichia coli 3003]
gi|425278511|ref|ZP_18669757.1| alkylated DNA repair protein AlkB [Escherichia coli ARS4.2123]
gi|323188061|gb|EFZ73356.1| alkylated DNA repair protein AlkB [Escherichia coli RN587/1]
gi|386246934|gb|EII88664.1| alkylated DNA repair protein AlkB [Escherichia coli 3003]
gi|408202099|gb|EKI27233.1| alkylated DNA repair protein AlkB [Escherichia coli ARS4.2123]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHHLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYVPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKVGVHP-------LTTDCRYNLTFRQ 211
>gi|222156969|ref|YP_002557108.1| alpha-ketoglutarate-dependent dioxygenase alkB [Escherichia coli
LF82]
gi|306814674|ref|ZP_07448836.1| 2OG-Fe(II) oxygenase [Escherichia coli NC101]
gi|331658292|ref|ZP_08359254.1| alkylated DNA repair protein AlkB [Escherichia coli TA206]
gi|331683889|ref|ZP_08384485.1| alkylated DNA repair protein AlkB [Escherichia coli H299]
gi|387617573|ref|YP_006120595.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O83:H1 str. NRG 857C]
gi|416335401|ref|ZP_11672094.1| Alkylated DNA repair protein AlkB [Escherichia coli WV_060327]
gi|422370211|ref|ZP_16450605.1| alkylated DNA repair protein AlkB [Escherichia coli MS 16-3]
gi|422382206|ref|ZP_16462367.1| alkylated DNA repair protein AlkB [Escherichia coli MS 57-2]
gi|425301074|ref|ZP_18690972.1| alkylated DNA repair protein AlkB [Escherichia coli 07798]
gi|432381953|ref|ZP_19624896.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE15]
gi|432387765|ref|ZP_19630654.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE16]
gi|432514515|ref|ZP_19751739.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE224]
gi|432612022|ref|ZP_19848184.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE72]
gi|432646784|ref|ZP_19882574.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE86]
gi|432656367|ref|ZP_19892071.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE93]
gi|432699644|ref|ZP_19934798.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE169]
gi|432732947|ref|ZP_19967780.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE45]
gi|432746256|ref|ZP_19980922.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE43]
gi|432760033|ref|ZP_19994527.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE46]
gi|432899231|ref|ZP_20109923.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE192]
gi|432905472|ref|ZP_20114339.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE194]
gi|432938564|ref|ZP_20136842.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE183]
gi|432972416|ref|ZP_20161283.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE207]
gi|432985972|ref|ZP_20174695.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE215]
gi|433029188|ref|ZP_20217047.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE109]
gi|433039213|ref|ZP_20226812.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE113]
gi|433083171|ref|ZP_20269628.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE133]
gi|433101759|ref|ZP_20287845.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE145]
gi|433144803|ref|ZP_20329947.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE168]
gi|433188996|ref|ZP_20373094.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE88]
gi|433198848|ref|ZP_20382750.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE94]
gi|450190777|ref|ZP_21890938.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
SEPT362]
gi|222033974|emb|CAP76715.1| alpha-ketoglutarate-dependent dioxygenase alkB [Escherichia coli
LF82]
gi|305852068|gb|EFM52520.1| 2OG-Fe(II) oxygenase [Escherichia coli NC101]
gi|312946834|gb|ADR27661.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O83:H1 str. NRG 857C]
gi|315298038|gb|EFU57307.1| alkylated DNA repair protein AlkB [Escherichia coli MS 16-3]
gi|320196084|gb|EFW70708.1| Alkylated DNA repair protein AlkB [Escherichia coli WV_060327]
gi|324006586|gb|EGB75805.1| alkylated DNA repair protein AlkB [Escherichia coli MS 57-2]
gi|331056540|gb|EGI28549.1| alkylated DNA repair protein AlkB [Escherichia coli TA206]
gi|331078841|gb|EGI50043.1| alkylated DNA repair protein AlkB [Escherichia coli H299]
gi|408213460|gb|EKI37945.1| alkylated DNA repair protein AlkB [Escherichia coli 07798]
gi|430906413|gb|ELC28013.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE16]
gi|430907428|gb|ELC28926.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE15]
gi|431041911|gb|ELD52406.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE224]
gi|431148196|gb|ELE49487.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE72]
gi|431180821|gb|ELE80708.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE86]
gi|431190837|gb|ELE90223.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE93]
gi|431243393|gb|ELF37780.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE169]
gi|431276134|gb|ELF67161.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE45]
gi|431291295|gb|ELF81808.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE43]
gi|431307687|gb|ELF95977.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE46]
gi|431426883|gb|ELH08927.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE192]
gi|431432707|gb|ELH14384.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE194]
gi|431463299|gb|ELH43492.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE183]
gi|431481918|gb|ELH61625.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE207]
gi|431500209|gb|ELH79225.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE215]
gi|431542928|gb|ELI17924.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE109]
gi|431551313|gb|ELI25299.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE113]
gi|431602063|gb|ELI71572.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE133]
gi|431619353|gb|ELI88277.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE145]
gi|431661498|gb|ELJ28311.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE168]
gi|431705702|gb|ELJ70292.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE88]
gi|431721552|gb|ELJ85546.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE94]
gi|449320085|gb|EMD10122.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
SEPT362]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHHLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYVPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKVGVHP-------LTTDCRYNLTFRQ 211
>gi|440224931|ref|YP_007332022.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhizobium tropici
CIAT 899]
gi|440036442|gb|AGB69476.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rhizobium tropici
CIAT 899]
Length = 202
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY R+GLHQD DE +LK PV+S S+G++ F G ++
Sbjct: 101 PEACLVNFYGNDARMGLHQDCDEQ--NLKA--PVLSVSLGNTCLFRVGGLNRNDRTLSFK 156
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+++ GGE R FHGV I P ++ LL+N GR+NLT R+
Sbjct: 157 LASGDIVVLGGEGRLCFHGVDRIYPATS--TLLKNG----GRINLTLRR 199
>gi|424815722|ref|ZP_18240873.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia fergusonii ECD227]
gi|325496742|gb|EGC94601.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia fergusonii ECD227]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNK----------PWPAMPHSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTADCRYNLTFRQ 211
>gi|387888633|ref|YP_006318931.1| DNA repair system specific for alkylated DNA [Escherichia blattae
DSM 4481]
gi|414592700|ref|ZP_11442349.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia blattae
NBRC 105725]
gi|386923466|gb|AFJ46420.1| DNA repair system specific for alkylated DNA [Escherichia blattae
DSM 4481]
gi|403196181|dbj|GAB80001.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia blattae
NBRC 105725]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--DPQ 294
PG V+L+ + + L+ I + P F Q G + + M C L W D Q
Sbjct: 17 PGAVILRRFARGCARELLAGIDAVAARAP--FRQMQTPGGFTMSVAMTSCGALGWVTDRQ 74
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + D ++P F L Q++ A P PD C++
Sbjct: 75 GYRYQPRDPQDLQPWPLMPPAFLTLGQQAAESAG---------------FPGFMPDSCLI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
N Y R+ LHQD+DE L+ P+VS S+G +A FL+G + ++ LE DV
Sbjct: 120 NRYLPGARMALHQDKDER--DLRA--PIVSVSLGLTARFLFGGLSRRDPVRQIPLEHCDV 175
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++GG +R +HG+ + P E+ ++ R NLT RQ
Sbjct: 176 VVWGGPARLAYHGIMPVRPG-------EHPLVGGVRYNLTLRQ 211
>gi|74312733|ref|YP_311152.1| DNA repair system specific for alkylated DNA [Shigella sonnei
Ss046]
gi|383179179|ref|YP_005457184.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Shigella sonnei
53G]
gi|414576821|ref|ZP_11434003.1| alkylated DNA repair protein AlkB [Shigella sonnei 3233-85]
gi|415844520|ref|ZP_11524262.1| alkylated DNA repair protein AlkB [Shigella sonnei 53G]
gi|418266606|ref|ZP_12886087.1| alkylated DNA repair protein AlkB [Shigella sonnei str. Moseley]
gi|420359286|ref|ZP_14860260.1| alkylated DNA repair protein AlkB [Shigella sonnei 3226-85]
gi|420364043|ref|ZP_14864926.1| alkylated DNA repair protein AlkB [Shigella sonnei 4822-66]
gi|73856210|gb|AAZ88917.1| DNA repair system specific for alkylated DNA [Shigella sonnei
Ss046]
gi|323168632|gb|EFZ54312.1| alkylated DNA repair protein AlkB [Shigella sonnei 53G]
gi|391281967|gb|EIQ40604.1| alkylated DNA repair protein AlkB [Shigella sonnei 3226-85]
gi|391284574|gb|EIQ43169.1| alkylated DNA repair protein AlkB [Shigella sonnei 3233-85]
gi|391293706|gb|EIQ51965.1| alkylated DNA repair protein AlkB [Shigella sonnei 4822-66]
gi|397899431|gb|EJL15805.1| alkylated DNA repair protein AlkB [Shigella sonnei str. Moseley]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTGDCRYNLTFRQ 211
>gi|419950521|ref|ZP_14466733.1| 2OG-Fe(II) oxygenase [Escherichia coli CUMT8]
gi|422762272|ref|ZP_16816029.1| alkylated DNA repair protein AlkB [Escherichia coli E1167]
gi|432750697|ref|ZP_19985301.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE29]
gi|432968321|ref|ZP_20157236.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE203]
gi|324117898|gb|EGC11797.1| alkylated DNA repair protein AlkB [Escherichia coli E1167]
gi|388416622|gb|EIL76503.1| 2OG-Fe(II) oxygenase [Escherichia coli CUMT8]
gi|431296679|gb|ELF86390.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE29]
gi|431471438|gb|ELH51331.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE203]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPWP----------AMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTGDCRYNLTFRQ 211
>gi|238895759|ref|YP_002920495.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|402779737|ref|YP_006635283.1| alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|238548077|dbj|BAH64428.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|402540673|gb|AFQ64822.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae 1084]
Length = 217
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG V+L+ + R L+ I + P F Q G + + M C L W
Sbjct: 15 LAPGAVVLRRFARERAPALLQAIADVASQSP--FRQMVTPGGYTMSVAMTNCGALGW--T 70
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
T ++G + + + ++ A+ + + P SPD C++
Sbjct: 71 TDRHG-----------YLYAPVDPVTDQTWPPMPAVFHELALAAAAAGGYPEFSPDACLI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
N Y +L LHQD+DE L+ P+VS S+G A F +G + ++ +++LLE GDV
Sbjct: 120 NRYCPGAKLSLHQDKDEQ--DLRA--PIVSVSLGLPAIFQFGGLQRSDPLQRLLLEHGDV 175
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++GGESR +HG+ + P R NLTFRQ
Sbjct: 176 VVWGGESRLFYHGIQPLKAGHHPET-------DDCRYNLTFRQ 211
>gi|156933166|ref|YP_001437082.1| hypothetical protein ESA_00977 [Cronobacter sakazakii ATCC BAA-894]
gi|156531420|gb|ABU76246.1| hypothetical protein ESA_00977 [Cronobacter sakazakii ATCC BAA-894]
Length = 214
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 98/223 (43%), Gaps = 33/223 (14%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQTRK 297
G V+L+ + L+ I + P F G + + M C + W +
Sbjct: 18 GAVVLRRFALASAPALMASIEAVAARSP--FRHMVTPGGYTMSVAMTNCGEVGWSTNQKG 75
Query: 298 YGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
Y QVD G +P F+ L + S A L +PD C++
Sbjct: 76 Y-LYAQVDPQTGAPWPAMPDAFRTLCDAAASAAGYL---------------DFTPDACLI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE GDV
Sbjct: 120 NRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAVFQFGGLKRNDPLKRLLLEHGDV 175
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++GG SR +HG+ + P P A E R NLTFRQ
Sbjct: 176 VVWGGPSRLFYHGIQPLKPGQHP-ATGEY------RYNLTFRQ 211
>gi|432554302|ref|ZP_19791025.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE47]
gi|431084107|gb|ELD90278.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE47]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHHLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYVPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKVGVHP-------LTTDCRYNLTFRQ 211
>gi|215487431|ref|YP_002329862.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O127:H6 str. E2348/69]
gi|312967513|ref|ZP_07781728.1| alkylated DNA repair protein AlkB [Escherichia coli 2362-75]
gi|419002762|ref|ZP_13550289.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1B]
gi|419008456|ref|ZP_13555887.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1C]
gi|419014136|ref|ZP_13561487.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1D]
gi|419019139|ref|ZP_13566446.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1E]
gi|419024641|ref|ZP_13571867.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2A]
gi|419029681|ref|ZP_13576844.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2C]
gi|419035480|ref|ZP_13582566.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2D]
gi|215265503|emb|CAS09905.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli O127:H6 str. E2348/69]
gi|312287710|gb|EFR15615.1| alkylated DNA repair protein AlkB [Escherichia coli 2362-75]
gi|377843974|gb|EHU09011.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1C]
gi|377847641|gb|EHU12639.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1B]
gi|377857474|gb|EHU22325.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1D]
gi|377860193|gb|EHU25019.1| alkylated DNA repair protein AlkB [Escherichia coli DEC1E]
gi|377863425|gb|EHU28230.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2A]
gi|377877863|gb|EHU42452.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2C]
gi|377879836|gb|EHU44408.1| alkylated DNA repair protein AlkB [Escherichia coli DEC2D]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHHLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYVPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKVGVHP-------LTTDCRYNLTFRQ 211
>gi|16130149|ref|NP_416716.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli str. K-12 substr. MG1655]
gi|170081832|ref|YP_001731152.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli str. K-12 substr. DH10B]
gi|238901387|ref|YP_002927183.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli BW2952]
gi|300948905|ref|ZP_07162967.1| alkylated DNA repair protein AlkB [Escherichia coli MS 116-1]
gi|300958897|ref|ZP_07171001.1| alkylated DNA repair protein AlkB [Escherichia coli MS 175-1]
gi|301024247|ref|ZP_07187942.1| alkylated DNA repair protein AlkB [Escherichia coli MS 196-1]
gi|301647698|ref|ZP_07247492.1| alkylated DNA repair protein AlkB [Escherichia coli MS 146-1]
gi|331642842|ref|ZP_08343977.1| alkylated DNA repair protein AlkB [Escherichia coli H736]
gi|386281282|ref|ZP_10058944.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia sp.
4_1_40B]
gi|386595005|ref|YP_006091405.1| alkylated DNA repair protein AlkB [Escherichia coli DH1]
gi|387612788|ref|YP_006115904.1| alpha-ketoglutarate-dependent dioxygenase (alkylated DNA repair
protein) [Escherichia coli ETEC H10407]
gi|387621922|ref|YP_006129549.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
DH1]
gi|388478260|ref|YP_490450.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli str. K-12 substr. W3110]
gi|404375563|ref|ZP_10980747.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia sp.
1_1_43]
gi|415778270|ref|ZP_11489316.1| alkylated DNA repair protein AlkB [Escherichia coli 3431]
gi|417259787|ref|ZP_12047310.1| alkylated DNA repair protein AlkB [Escherichia coli 2.3916]
gi|417272223|ref|ZP_12059572.1| alkylated DNA repair protein AlkB [Escherichia coli 2.4168]
gi|417277644|ref|ZP_12064967.1| alkylated DNA repair protein AlkB [Escherichia coli 3.2303]
gi|417291192|ref|ZP_12078473.1| alkylated DNA repair protein AlkB [Escherichia coli B41]
gi|417613683|ref|ZP_12264141.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_EH250]
gi|417618808|ref|ZP_12269222.1| alkylated DNA repair protein AlkB [Escherichia coli G58-1]
gi|417635145|ref|ZP_12285358.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_S1191]
gi|417947034|ref|ZP_12590237.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
XH140A]
gi|417975475|ref|ZP_12616274.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
XH001]
gi|418303608|ref|ZP_12915402.1| alkylated DNA repair protein AlkB [Escherichia coli UMNF18]
gi|419143152|ref|ZP_13687890.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6A]
gi|419149493|ref|ZP_13694146.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6B]
gi|419159889|ref|ZP_13704394.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6D]
gi|419165016|ref|ZP_13709473.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6E]
gi|419175733|ref|ZP_13719571.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7B]
gi|419809943|ref|ZP_14334826.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O32:H37 str. P4]
gi|419938865|ref|ZP_14455674.1| 2OG-Fe(II) oxygenase [Escherichia coli 75]
gi|422766822|ref|ZP_16820549.1| alkylated DNA repair protein AlkB [Escherichia coli E1520]
gi|422771941|ref|ZP_16825630.1| alkylated DNA repair protein AlkB [Escherichia coli E482]
gi|422819611|ref|ZP_16867822.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
M919]
gi|423704406|ref|ZP_17678831.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
H730]
gi|425115626|ref|ZP_18517427.1| alkylated DNA repair protein AlkB [Escherichia coli 8.0566]
gi|425120351|ref|ZP_18522050.1| alkylated DNA repair protein AlkB [Escherichia coli 8.0569]
gi|425273382|ref|ZP_18664794.1| alkylated DNA repair protein AlkB [Escherichia coli TW15901]
gi|425283925|ref|ZP_18674964.1| alkylated DNA repair protein AlkB [Escherichia coli TW00353]
gi|432564466|ref|ZP_19801048.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE51]
gi|432627864|ref|ZP_19863840.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE77]
gi|432637460|ref|ZP_19873330.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE81]
gi|432686046|ref|ZP_19921343.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE156]
gi|432692186|ref|ZP_19927414.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE161]
gi|432705006|ref|ZP_19940107.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE171]
gi|432737727|ref|ZP_19972485.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE42]
gi|432955732|ref|ZP_20147610.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE197]
gi|433048591|ref|ZP_20235944.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE120]
gi|442592186|ref|ZP_21010166.1| Alkylated DNA repair protein AlkB [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|450245750|ref|ZP_21900707.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
S17]
gi|113638|sp|P05050.1|ALKB_ECOLI RecName: Full=Alpha-ketoglutarate-dependent dioxygenase AlkB;
AltName: Full=Alkylated DNA repair protein AlkB;
AltName: Full=DNA oxidative demethylase AlkB
gi|145195|gb|AAA23416.1| AlkB protein (alkB) [Escherichia coli]
gi|405945|gb|AAA16409.1| alkB [Escherichia coli]
gi|1736853|dbj|BAA15995.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli str. K12 substr. W3110]
gi|1788541|gb|AAC75272.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli str. K-12 substr. MG1655]
gi|169889667|gb|ACB03374.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli str. K-12 substr. DH10B]
gi|238861965|gb|ACR63963.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli BW2952]
gi|260448694|gb|ACX39116.1| alkylated DNA repair protein AlkB [Escherichia coli DH1]
gi|299880510|gb|EFI88721.1| alkylated DNA repair protein AlkB [Escherichia coli MS 196-1]
gi|300314460|gb|EFJ64244.1| alkylated DNA repair protein AlkB [Escherichia coli MS 175-1]
gi|300451601|gb|EFK15221.1| alkylated DNA repair protein AlkB [Escherichia coli MS 116-1]
gi|301074228|gb|EFK89034.1| alkylated DNA repair protein AlkB [Escherichia coli MS 146-1]
gi|309702524|emb|CBJ01850.1| alpha-ketoglutarate-dependent dioxygenase (alkylated DNA repair
protein) [Escherichia coli ETEC H10407]
gi|315136845|dbj|BAJ44004.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
DH1]
gi|315615473|gb|EFU96105.1| alkylated DNA repair protein AlkB [Escherichia coli 3431]
gi|323936827|gb|EGB33112.1| alkylated DNA repair protein AlkB [Escherichia coli E1520]
gi|323941093|gb|EGB37280.1| alkylated DNA repair protein AlkB [Escherichia coli E482]
gi|331039640|gb|EGI11860.1| alkylated DNA repair protein AlkB [Escherichia coli H736]
gi|339415706|gb|AEJ57378.1| alkylated DNA repair protein AlkB [Escherichia coli UMNF18]
gi|342361220|gb|EGU25364.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
XH140A]
gi|344195040|gb|EGV49111.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
XH001]
gi|345361877|gb|EGW94034.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_EH250]
gi|345375522|gb|EGX07469.1| alkylated DNA repair protein AlkB [Escherichia coli G58-1]
gi|345387428|gb|EGX17250.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_S1191]
gi|359332556|dbj|BAL39003.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia coli str. K-12 substr. MDS42]
gi|377992615|gb|EHV55762.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6B]
gi|377993665|gb|EHV56796.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6A]
gi|378007233|gb|EHV70202.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6D]
gi|378011098|gb|EHV74043.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6E]
gi|378033136|gb|EHV95716.1| alkylated DNA repair protein AlkB [Escherichia coli DEC7B]
gi|385157027|gb|EIF19020.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O32:H37 str. P4]
gi|385537024|gb|EIF83909.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
M919]
gi|385706645|gb|EIG43684.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
H730]
gi|386121421|gb|EIG70036.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia sp.
4_1_40B]
gi|386226510|gb|EII48812.1| alkylated DNA repair protein AlkB [Escherichia coli 2.3916]
gi|386235923|gb|EII67899.1| alkylated DNA repair protein AlkB [Escherichia coli 2.4168]
gi|386239712|gb|EII76639.1| alkylated DNA repair protein AlkB [Escherichia coli 3.2303]
gi|386253514|gb|EIJ03204.1| alkylated DNA repair protein AlkB [Escherichia coli B41]
gi|388409273|gb|EIL69577.1| 2OG-Fe(II) oxygenase [Escherichia coli 75]
gi|404291045|gb|EJZ47943.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia sp.
1_1_43]
gi|408193164|gb|EKI18717.1| alkylated DNA repair protein AlkB [Escherichia coli TW15901]
gi|408201615|gb|EKI26764.1| alkylated DNA repair protein AlkB [Escherichia coli TW00353]
gi|408568113|gb|EKK44151.1| alkylated DNA repair protein AlkB [Escherichia coli 8.0566]
gi|408569104|gb|EKK45109.1| alkylated DNA repair protein AlkB [Escherichia coli 8.0569]
gi|431093252|gb|ELD98920.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE51]
gi|431162475|gb|ELE62916.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE77]
gi|431170654|gb|ELE70843.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE81]
gi|431221828|gb|ELF19125.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE156]
gi|431226534|gb|ELF23693.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE161]
gi|431242676|gb|ELF37088.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE171]
gi|431282187|gb|ELF73072.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE42]
gi|431467118|gb|ELH47129.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE197]
gi|431564362|gb|ELI37536.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE120]
gi|441608339|emb|CCP99192.1| Alkylated DNA repair protein AlkB [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|449320005|gb|EMD10045.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
S17]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTIDCRYNLTFRQ 211
>gi|422806217|ref|ZP_16854649.1| alkylated DNA repair protein AlkB [Escherichia fergusonii B253]
gi|324112755|gb|EGC06731.1| alkylated DNA repair protein AlkB [Escherichia fergusonii B253]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPHSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTADCRYNLTFRQ 211
>gi|218508080|ref|ZP_03505958.1| alkylated DNA repair protein [Rhizobium etli Brasil 5]
Length = 203
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VNFY+ R+GLHQD+DE PVVS S+G+S F G ++
Sbjct: 102 PEACLVNFYSDEARMGLHQDKDERNLQA----PVVSISLGNSCLFRVGGLTRNDRTLSFK 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGD+++ GGE R FHGV I + A LL+N GR+NLT R+
Sbjct: 158 LSSGDLVVLGGEGRLCFHGVDRI--HRATSTLLKNG----GRINLTLRR 200
>gi|209919671|ref|YP_002293755.1| DNA repair protein [Escherichia coli SE11]
gi|260856200|ref|YP_003230091.1| oxidative demethylase AlkB [Escherichia coli O26:H11 str. 11368]
gi|260868929|ref|YP_003235331.1| oxidative demethylase AlkB [Escherichia coli O111:H- str. 11128]
gi|300822666|ref|ZP_07102804.1| alkylated DNA repair protein AlkB [Escherichia coli MS 119-7]
gi|331678167|ref|ZP_08378842.1| alkylated DNA repair protein AlkB [Escherichia coli H591]
gi|415793613|ref|ZP_11496230.1| alkylated DNA repair protein AlkB [Escherichia coli EPECa14]
gi|415822916|ref|ZP_11511435.1| alkylated DNA repair protein AlkB [Escherichia coli OK1180]
gi|417146200|ref|ZP_11987158.1| alkylated DNA repair protein AlkB [Escherichia coli 1.2264]
gi|417191867|ref|ZP_12013967.1| alkylated DNA repair protein AlkB [Escherichia coli 4.0522]
gi|417213568|ref|ZP_12022609.1| alkylated DNA repair protein AlkB [Escherichia coli JB1-95]
gi|417223353|ref|ZP_12026793.1| alkylated DNA repair protein AlkB [Escherichia coli 96.154]
gi|417269444|ref|ZP_12056804.1| alkylated DNA repair protein AlkB [Escherichia coli 3.3884]
gi|417298539|ref|ZP_12085778.1| alkylated DNA repair protein AlkB [Escherichia coli 900105 (10e)]
gi|417592491|ref|ZP_12243188.1| alkylated DNA repair protein AlkB [Escherichia coli 2534-86]
gi|417602825|ref|ZP_12253395.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_94C]
gi|417608861|ref|ZP_12259364.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_DG131-3]
gi|418944585|ref|ZP_13497622.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H43 str. T22]
gi|419197696|ref|ZP_13741084.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8A]
gi|419203987|ref|ZP_13747170.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8B]
gi|419210387|ref|ZP_13753466.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8C]
gi|419216263|ref|ZP_13759265.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8D]
gi|419222205|ref|ZP_13765128.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8E]
gi|419227402|ref|ZP_13770260.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9A]
gi|419238486|ref|ZP_13781207.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9C]
gi|419243935|ref|ZP_13786574.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9D]
gi|419255594|ref|ZP_13798113.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10A]
gi|419261798|ref|ZP_13804220.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10B]
gi|419284817|ref|ZP_13826993.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10F]
gi|419370720|ref|ZP_13911839.1| alkylated DNA repair protein AlkB [Escherichia coli DEC14A]
gi|419877040|ref|ZP_14398698.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CVM9534]
gi|419883257|ref|ZP_14404389.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CVM9545]
gi|419886976|ref|ZP_14407594.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CVM9570]
gi|419895818|ref|ZP_14415603.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CVM9574]
gi|419899925|ref|ZP_14419406.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM9942]
gi|419909104|ref|ZP_14427738.1| oxidative demethylase AlkB [Escherichia coli O26:H11 str. CVM10026]
gi|420089889|ref|ZP_14601669.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CVM9602]
gi|420095748|ref|ZP_14607228.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CVM9634]
gi|420102266|ref|ZP_14613290.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CVM9455]
gi|420109985|ref|ZP_14620051.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CVM9553]
gi|420118024|ref|ZP_14627368.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM10021]
gi|420122399|ref|ZP_14631375.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM10030]
gi|420128467|ref|ZP_14637023.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM10224]
gi|420134371|ref|ZP_14642480.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM9952]
gi|422350978|ref|ZP_16431824.1| alkylated DNA repair protein AlkB [Escherichia coli MS 117-3]
gi|423706258|ref|ZP_17680641.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
B799]
gi|424754239|ref|ZP_18182157.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CFSAN001629]
gi|424757462|ref|ZP_18185199.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CFSAN001630]
gi|424772670|ref|ZP_18199764.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CFSAN001632]
gi|425380266|ref|ZP_18764306.1| alkylated DNA repair protein AlkB [Escherichia coli EC1865]
gi|432377384|ref|ZP_19620375.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE12]
gi|432835201|ref|ZP_20068740.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE136]
gi|433092603|ref|ZP_20278870.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE138]
gi|209912930|dbj|BAG78004.1| DNA repair protein [Escherichia coli SE11]
gi|257754849|dbj|BAI26351.1| oxidative demethylase AlkB [Escherichia coli O26:H11 str. 11368]
gi|257765285|dbj|BAI36780.1| oxidative demethylase AlkB [Escherichia coli O111:H- str. 11128]
gi|300524866|gb|EFK45935.1| alkylated DNA repair protein AlkB [Escherichia coli MS 119-7]
gi|323152272|gb|EFZ38562.1| alkylated DNA repair protein AlkB [Escherichia coli EPECa14]
gi|323176871|gb|EFZ62461.1| alkylated DNA repair protein AlkB [Escherichia coli OK1180]
gi|324020890|gb|EGB90109.1| alkylated DNA repair protein AlkB [Escherichia coli MS 117-3]
gi|331074627|gb|EGI45947.1| alkylated DNA repair protein AlkB [Escherichia coli H591]
gi|345338828|gb|EGW71255.1| alkylated DNA repair protein AlkB [Escherichia coli 2534-86]
gi|345350491|gb|EGW82766.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_94C]
gi|345358070|gb|EGW90258.1| alkylated DNA repair protein AlkB [Escherichia coli STEC_DG131-3]
gi|375320110|gb|EHS66117.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O157:H43 str. T22]
gi|378047228|gb|EHW09600.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8A]
gi|378048707|gb|EHW11060.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8B]
gi|378053843|gb|EHW16135.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8C]
gi|378062747|gb|EHW24924.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8D]
gi|378065527|gb|EHW27672.1| alkylated DNA repair protein AlkB [Escherichia coli DEC8E]
gi|378074915|gb|EHW36944.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9A]
gi|378084386|gb|EHW46298.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9C]
gi|378091013|gb|EHW52848.1| alkylated DNA repair protein AlkB [Escherichia coli DEC9D]
gi|378100580|gb|EHW62276.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10A]
gi|378106847|gb|EHW68475.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10B]
gi|378132071|gb|EHW93424.1| alkylated DNA repair protein AlkB [Escherichia coli DEC10F]
gi|378217314|gb|EHX77593.1| alkylated DNA repair protein AlkB [Escherichia coli DEC14A]
gi|385712142|gb|EIG49097.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
B799]
gi|386163652|gb|EIH25447.1| alkylated DNA repair protein AlkB [Escherichia coli 1.2264]
gi|386190749|gb|EIH79495.1| alkylated DNA repair protein AlkB [Escherichia coli 4.0522]
gi|386194264|gb|EIH88520.1| alkylated DNA repair protein AlkB [Escherichia coli JB1-95]
gi|386203155|gb|EII02146.1| alkylated DNA repair protein AlkB [Escherichia coli 96.154]
gi|386228249|gb|EII55605.1| alkylated DNA repair protein AlkB [Escherichia coli 3.3884]
gi|386258219|gb|EIJ13701.1| alkylated DNA repair protein AlkB [Escherichia coli 900105 (10e)]
gi|388341791|gb|EIL07876.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CVM9534]
gi|388358992|gb|EIL23361.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CVM9545]
gi|388360139|gb|EIL24386.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CVM9574]
gi|388364220|gb|EIL28089.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CVM9570]
gi|388373843|gb|EIL37071.1| oxidative demethylase AlkB [Escherichia coli O26:H11 str. CVM10026]
gi|388379087|gb|EIL41778.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM9942]
gi|394385586|gb|EJE63113.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM10224]
gi|394387099|gb|EJE64569.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CVM9602]
gi|394391856|gb|EJE68685.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CVM9634]
gi|394401465|gb|EJE77278.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM10021]
gi|394405223|gb|EJE80458.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CVM9553]
gi|394412391|gb|EJE86526.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CVM9455]
gi|394421626|gb|EJE95084.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM9952]
gi|394421984|gb|EJE95395.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CVM10030]
gi|408296633|gb|EKJ14859.1| alkylated DNA repair protein AlkB [Escherichia coli EC1865]
gi|421933729|gb|EKT91514.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O26:H11 str. CFSAN001629]
gi|421938221|gb|EKT95808.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H8 str. CFSAN001632]
gi|421949194|gb|EKU06183.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
O111:H11 str. CFSAN001630]
gi|430898683|gb|ELC20816.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE12]
gi|431385561|gb|ELG69548.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE136]
gi|431609933|gb|ELI79238.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE138]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTGDCRYNLTFRQ 211
>gi|152971171|ref|YP_001336280.1| DNA repair system specific for alkylated DNA [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|262043275|ref|ZP_06016406.1| alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|425075682|ref|ZP_18478785.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425082476|ref|ZP_18485573.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|425086318|ref|ZP_18489411.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|449052086|ref|ZP_21732166.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae hvKP1]
gi|150956020|gb|ABR78050.1| DNA repair system specific for alkylated DNA [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|259039374|gb|EEW40514.1| alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|405594082|gb|EKB67505.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405600728|gb|EKB73893.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|405605233|gb|EKB78299.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|448876039|gb|EMB11039.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae hvKP1]
Length = 217
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG V+L+ + R L+ I + P F Q G + + M C L W
Sbjct: 15 LAPGAVVLRRFARERAPALLQAIADVASQSP--FRQMVTPGGYTMSVAMTNCGALGWTTD 72
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
Y + + + ++ A+ + + P SPD C++
Sbjct: 73 RHGY-------------LYAPVDPVTDQTWPPMPAVFHELALAAAAAGGYPEFSPDACLI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
N Y +L LHQD+DE L+ P+VS S+G A F +G + ++ +++LLE GDV
Sbjct: 120 NRYCPGAKLSLHQDKDEQ--DLRA--PIVSVSLGLPAIFQFGGLQRSDPLQRLLLEHGDV 175
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++GGESR +HG+ + P E R NLTFRQ
Sbjct: 176 VVWGGESRLFYHGIQPLKAGHHP----ETGDC---RYNLTFRQ 211
>gi|154244303|ref|YP_001415261.1| 2OG-Fe(II) oxygenase [Xanthobacter autotrophicus Py2]
gi|154158388|gb|ABS65604.1| 2OG-Fe(II) oxygenase [Xanthobacter autotrophicus Py2]
Length = 218
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 350 DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLL 409
+ C++N+Y R+ LHQDRDE+ ++ PV+S S+GD+A F G E + L
Sbjct: 116 EACLINYYGPDARMSLHQDRDEADFTA----PVLSLSLGDTALFRIGGETRGGATRSIRL 171
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGD+ + G SR FHG+ I P ++ LL GR NLT R+
Sbjct: 172 SSGDIFLLSGPSRLAFHGIDRILPGTS--TLLPEG----GRFNLTLRR 213
>gi|432417686|ref|ZP_19660290.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE44]
gi|430938930|gb|ELC59153.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE44]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTIDCRYNLTFRQ 211
>gi|90109327|pdb|2FD8|A Chain A, Crystal Structure Of Alkb In Complex With Fe(Ii),
2-Oxoglutarate, And Methylated Trinucleotide T-Mea-T
gi|90109337|pdb|2FDF|A Chain A, Crystal Structure Of Alkb In Complex With Co(Ii),
2-Oxoglutarate, And Methylated Trinucleotide T-Mea-T
gi|90109339|pdb|2FDG|A Chain A, Crystal Structure Of Alkb In Complex With Fe(Ii),
Succinate, And Methylated Trinucleotide T-Mea-T
gi|90109341|pdb|2FDH|A Chain A, Crystal Structure Of Alkb In Complex With Mn(Ii),
2-Oxoglutarate, And Methylated Trinucleotide T-Mea-T
gi|90109343|pdb|2FDI|A Chain A, Crystal Structure Of Alkb In Complex With Fe(Ii),
2-Oxoglutarate, And Methylated Trinucleotide T-Mea-T
(Air 3 Hours)
gi|90109345|pdb|2FDJ|A Chain A, Crystal Structure Of Alkb In Complex With Fe(Ii) And
Succinate
gi|90109346|pdb|2FDK|A Chain A, Crystal Structure Of Alkb In Complex With Fe(ii),
2-oxoglutarate, And Methylated Trinucleotide T-mea-t
(air 9 Days)
gi|256599859|pdb|3I2O|A Chain A, Crystal Structure Of Alkb In Complex With Fe(Ii),
2-Oxoglutarate And Methylated Trinucleotide T-Mea-T
gi|256599863|pdb|3I3M|A Chain A, Crystal Structure Of Alkb In Complex With Mn(Ii),
2-Oxoglutarate And Methylated Trinucleotide T-Mec-T
gi|256599865|pdb|3I3Q|A Chain A, Crystal Structure Of Alkb In Complex With Mn(Ii) And
2-Oxoglutarate
gi|256599866|pdb|3I3Q|B Chain B, Crystal Structure Of Alkb In Complex With Mn(Ii) And
2-Oxoglutarate
gi|256599867|pdb|3I49|A Chain A, Crystal Structure Of Alkb In Complex With Fe(Ii),
2-Oxoglutarate And Methylated Trinucleotide T-Mec-T
Length = 211
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 72 DPQTNK----------PWPAMPQSFHNLCQRAATAAG---------------YPDFQPDA 106
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 107 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 162
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 163 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTIDCRYNLTFRQ 201
>gi|157161694|ref|YP_001459012.1| alkylated DNA repair protein AlkB [Escherichia coli HS]
gi|312973535|ref|ZP_07787707.1| alkylated DNA repair protein AlkB [Escherichia coli 1827-70]
gi|432370452|ref|ZP_19613538.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE10]
gi|432486019|ref|ZP_19727934.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE212]
gi|433174134|ref|ZP_20358659.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE232]
gi|157067374|gb|ABV06629.1| alkylated DNA repair protein AlkB [Escherichia coli HS]
gi|310332130|gb|EFP99365.1| alkylated DNA repair protein AlkB [Escherichia coli 1827-70]
gi|430884664|gb|ELC07599.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE10]
gi|431015228|gb|ELD28783.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE212]
gi|431691878|gb|ELJ57323.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE232]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTIDCRYNLTFRQ 211
>gi|399071677|ref|ZP_10750069.1| alkylated DNA repair protein [Caulobacter sp. AP07]
gi|398043193|gb|EJL36120.1| alkylated DNA repair protein [Caulobacter sp. AP07]
Length = 205
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 60/116 (51%), Gaps = 16/116 (13%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P + PD C++N Y R+GLHQDRDE+ PV+S S+GD+A F G +
Sbjct: 99 PEIPPDSCLINLYRDEARMGLHQDRDEA----DPRFPVLSISLGDTAVFRIGGPSRKDPT 154
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSA---PGALLENTMLRPGRLNLTFRQ 457
+ L SGDV G +R FHGV I P S+ PG GR+NLT R+
Sbjct: 155 RSLRLSSGDVCRLSGPARLAFHGVDRILPGSSGLVPGG---------GRINLTLRR 201
>gi|397659108|ref|YP_006499810.1| alkylated DNA repair protein AlkB [Klebsiella oxytoca E718]
gi|394347327|gb|AFN33448.1| Alkylated DNA repair protein AlkB [Klebsiella oxytoca E718]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG ++L+ Y R L+ I + + P F+Q G + + M C L W
Sbjct: 15 LAPGAIILRRYARERAPALLQAISEIACRSP--FHQMVTPGGYTMSVAMTNCGELGWT-- 70
Query: 295 TRKYGKKRQVD----GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPD 350
T ++G D G +PS F++L + + + +PD
Sbjct: 71 TNQHGYLYAADDPLTGKRWPQMPSLFRELAAEAAAASG---------------YARFTPD 115
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLE 410
C++N Y +L LHQD+DE +L+ P+VS S+G A F +G R + +VLLE
Sbjct: 116 ACLINRYQPGTKLSLHQDKDEQ--NLRA--PIVSVSLGLPAIFQFGGLRRNDPLRRVLLE 171
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GDV+++GGESR +HG+ + P R NLTFR
Sbjct: 172 HGDVVVWGGESRLFYHGIQPLKEGIHPAT-------GGCRYNLTFR 210
>gi|283807196|pdb|3KHB|A Chain A, Crystal Structure Of Escherichia Coli Alkb With Co(Ii) And
2-Og
gi|283807197|pdb|3KHB|B Chain B, Crystal Structure Of Escherichia Coli Alkb With Co(Ii) And
2-Og
Length = 219
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 85 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 119
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 120 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 175
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 176 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTIDCRYNLTFRQ 214
>gi|393769879|ref|ZP_10358396.1| 2OG-Fe(II) oxygenase [Methylobacterium sp. GXF4]
gi|392724701|gb|EIZ82049.1| 2OG-Fe(II) oxygenase [Methylobacterium sp. GXF4]
Length = 217
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 16/116 (13%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C++N Y R+GLHQDRDE+ +S PVVS S+G +A F YG + ++ +
Sbjct: 102 PEACLINLYAPDARMGLHQDRDEADFSA----PVVSLSLGATALFRYGGLQRSDPTRSIR 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINP-------NSAPGALLENTMLRPGRLNLTFRQ 457
L GD L+ GG SR + HGV + N PG L + GR NLT R+
Sbjct: 158 LHPGDALVIGGASRLIHHGVDRLYAVNDLLAENPLPGFLPDG-----GRCNLTLRR 208
>gi|418957421|ref|ZP_13509345.1| alkylated DNA repair protein AlkB [Escherichia coli J53]
gi|384380068|gb|EIE37935.1| alkylated DNA repair protein AlkB [Escherichia coli J53]
Length = 215
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 81 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 115
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 116 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 171
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 172 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTIDCRYNLTFRQ 210
>gi|432802431|ref|ZP_20036410.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE84]
gi|431348220|gb|ELG35078.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE84]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNK----------PWPAMPQSFHHLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYVPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTGDCRYNLTFRQ 211
>gi|379318363|pdb|3T3Y|A Chain A, Crystal Structure Of Alkb In Complex With Fe(Iii) And
2-(3- Hydroxypicolinomido)acetic Acid
gi|379318364|pdb|3T4H|B Chain B, Crystal Structure Of Alkb In Complex With Fe(Iii) And
N-Oxalyl-S-(3- Nitrobenzyl)-L-Cysteine
gi|379318365|pdb|3T4V|A Chain A, Crystal Structure Of Alkb In Complex With Fe(Iii) And
N-Oxalyl-S-(2- Napthalenemethyl)-L-Cysteine
Length = 206
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 72 DPQTNK----------PWPAMPQSFHNLCQRAATAAG---------------YPDFQPDA 106
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 107 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 162
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 163 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTIDCRYNLTFRQ 201
>gi|432466305|ref|ZP_19708394.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE205]
gi|432584468|ref|ZP_19820862.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE57]
gi|433073404|ref|ZP_20260059.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE129]
gi|433120810|ref|ZP_20306482.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE157]
gi|433183876|ref|ZP_20368127.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE85]
gi|430993889|gb|ELD10233.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE205]
gi|431115827|gb|ELE19321.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE57]
gi|431588115|gb|ELI59463.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE129]
gi|431642411|gb|ELJ10134.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE157]
gi|431706438|gb|ELJ71009.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE85]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNK----------PWPAMPQSFHHLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYVPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LAGDCRYNLTFRQ 211
>gi|420379233|ref|ZP_14878721.1| alkylated DNA repair protein AlkB [Shigella dysenteriae 225-75]
gi|391305387|gb|EIQ63173.1| alkylated DNA repair protein AlkB [Shigella dysenteriae 225-75]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPNLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GD++++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDMVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|420373902|ref|ZP_14873965.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Shigella flexneri
1235-66]
gi|391316925|gb|EIQ74310.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Shigella flexneri
1235-66]
Length = 227
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 96/225 (42%), Gaps = 31/225 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L G V+L+ + L+ I + P F Q G + + M C L W D
Sbjct: 15 LASGAVILRRFAFESAPALLRAIAATARQSP--FRQMVTPGGYTMSVAMTNCGHLGWTTD 72
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y + G +P F + Q++ + A P PD C
Sbjct: 73 QHGYLYSPVDPLTGAHWPPLPEVFAEQCQQAATAAG---------------YPDFQPDAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y +L LHQD+DE L+ P+VS S+G A F +G R + ++VLLE G
Sbjct: 118 LINRYTPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLRRNDPLKRVLLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
DV+++GG SR +HGV + P + R NLTFRQ
Sbjct: 174 DVVVWGGNSRLFYHGVQPLKTGYHP-------LTGDCRYNLTFRQ 211
>gi|238762402|ref|ZP_04623373.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Yersinia
kristensenii ATCC 33638]
gi|238699387|gb|EEP92133.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Yersinia
kristensenii ATCC 33638]
Length = 221
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 35/231 (15%)
Query: 230 WTREGILRPGMVLLKHYLTIREQILIVRICQELGKGP-GGFYQPGYNDGAKLRLRMM-CL 287
W E L PG ++L H+++ + L+ + P PG G ++ + M C
Sbjct: 14 WVEE--LAPGALVLHHFVSEQAPSLLAEVTAITTVAPLRHLITPG---GYRMSVAMSNCG 68
Query: 288 GLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILP 345
+ W D + +Y + +P F L + +A L
Sbjct: 69 SVGWVSDARGYRYSPIDPLTEMRWPAMPESFMALAISAARQAGFL--------------- 113
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
P+ C++N Y +L LHQD+DE L P+VS S+G A F +G K +
Sbjct: 114 HFQPNACLINRYEVGAKLSLHQDKDE----LDLRQPIVSVSLGLPAVFQFGGASREAKCQ 169
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
KVLL GDV+++GG SR +HGV + +P A R+NLTFR
Sbjct: 170 KVLLSEGDVVVWGGPSRLNYHGVLPVKAGFSPSA-------GAYRINLTFR 213
>gi|123443816|ref|YP_001007787.1| alkylated DNA repair protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090777|emb|CAL13659.1| alkylated DNA repair protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 221
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 95/231 (41%), Gaps = 33/231 (14%)
Query: 230 WTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLG 288
W E L PG +L H+ + L+ I P F G ++ + M C
Sbjct: 14 WVEE--LAPGAFVLHHFAQEQASSLLAEITTITTVAP--FRHLITPGGYRMSVAMSNCGS 69
Query: 289 LDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPA 346
L W D +Y + +P F L + +A +
Sbjct: 70 LGWVSDVGGYRYSSIDPLTELRWPAMPQSFMSLAVAAAQQAGFV---------------D 114
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD C++N Y +L LHQD+DE L P+VS S+G A F +G K ++
Sbjct: 115 FQPDACLINRYEVGAKLSLHQDKDE----LDLRQPIVSVSLGLPAVFQFGGASREAKCQR 170
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
VLL GDV+++GG SR +HGV I +P A R+NLTFR+
Sbjct: 171 VLLSEGDVVVWGGPSRLNYHGVLPIKAGFSPAA-------GAYRINLTFRR 214
>gi|340000012|ref|YP_004730895.1| AlkB protein [Salmonella bongori NCTC 12419]
gi|339513373|emb|CCC31123.1| AlkB protein [Salmonella bongori NCTC 12419]
Length = 216
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD C++N Y +L LHQD+DE L+ P+VS S+G +A F +G R ++ +
Sbjct: 112 FQPDACLINRYMPGAKLSLHQDKDEP--DLRA--PIVSVSLGVAAIFQFGGLRRSDPLRR 167
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+LLE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 168 ILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|333928127|ref|YP_004501706.1| 2OG-Fe(II) oxygenase [Serratia sp. AS12]
gi|333933080|ref|YP_004506658.1| 2OG-Fe(II) oxygenase [Serratia plymuthica AS9]
gi|386329951|ref|YP_006026121.1| 2OG-Fe(II) oxygenase [Serratia sp. AS13]
gi|333474687|gb|AEF46397.1| 2OG-Fe(II) oxygenase [Serratia plymuthica AS9]
gi|333492187|gb|AEF51349.1| 2OG-Fe(II) oxygenase [Serratia sp. AS12]
gi|333962284|gb|AEG29057.1| 2OG-Fe(II) oxygenase [Serratia sp. AS13]
Length = 215
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 28/183 (15%)
Query: 277 GAKLRLRMMCLGLDWDPQTR--KYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMD 334
G + + M G W +R +Y ++ G IP+ F L + +A
Sbjct: 57 GHVMSVAMSWCGNGWSSDSRGYRYSERDSRSGKRWPPIPAIFMALADEAAQQAG------ 110
Query: 335 SKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFL 394
PD C++N Y+ +L LHQD+DE + G P+VS S+G A F
Sbjct: 111 ---------FAPFVPDSCLMNRYDPGSKLSLHQDKDEHDF----GSPIVSVSLGLPAVFQ 157
Query: 395 YGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLT 454
+G + +++A+++ L GDV+++GG SR FHG+ I ++++ P R+N+T
Sbjct: 158 FGGMQRSDRAQRIPLAHGDVVVWGGPSRLCFHGIMPIKEG-------YHSLVGPHRINIT 210
Query: 455 FRQ 457
R+
Sbjct: 211 LRK 213
>gi|422644851|ref|ZP_16707988.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|330958402|gb|EGH58662.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. maculicola str. ES4326]
Length = 228
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 78/174 (44%), Gaps = 28/174 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D +Y +G +P F QL Q + A
Sbjct: 76 CGQLGWITDRHGYRYSTTDPQNGRPWPAMPDVFMQLAQNAARAAG--------------- 120
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C++N Y ++ LHQDRDE + PVVS S+G A F +G ++K
Sbjct: 121 YPGFIPDACLINRYIPGAKMSLHQDRDEHDHQW----PVVSVSLGIPAIFQFGGMLRSDK 176
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++ L GDV+++GGE R FHG+ + P +L R+NLTFR+
Sbjct: 177 PQRISLFHGDVVVWGGEDRLRFHGILPVKQAGHP-------LLGEQRINLTFRK 223
>gi|185177837|pdb|3BI3|A Chain A, X-Ray Structure Of Alkb Protein Bound To Dsdna Containing
1meaA WITH Cofactors
Length = 201
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 70 DPQTNK----------PWPAMPQSFHNLCQRAATAAG---------------YPDFQPDA 104
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 105 CLINRYAPGAKLCLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 160
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 161 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTIDCRYNLTFRQ 199
>gi|331673732|ref|ZP_08374495.1| alkylated DNA repair protein AlkB [Escherichia coli TA280]
gi|331069005|gb|EGI40397.1| alkylated DNA repair protein AlkB [Escherichia coli TA280]
Length = 216
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHHLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GD++++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDMVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|414166572|ref|ZP_11422804.1| alkylated DNA repair protein AlkB [Afipia clevelandensis ATCC
49720]
gi|410892416|gb|EKS40208.1| alkylated DNA repair protein AlkB [Afipia clevelandensis ATCC
49720]
Length = 215
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 96/229 (41%), Gaps = 31/229 (13%)
Query: 232 REGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLD 290
R+ L PG +LL + E LI + + + P F G ++ + M C +
Sbjct: 13 RDVQLAPGAMLLAGFARPLEAALIEAVAAIIARAP--FRHLVTPGGHRMSVAMTNCGRVG 70
Query: 291 W--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALS 348
W D +Y G +P F L R+ A
Sbjct: 71 WVSDRTGYRYDTNDPDSGLPWPSMPETFADLALRAADGAG---------------FADFR 115
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y +L LHQD+DE L P+VS S+G A FL+G +K +
Sbjct: 116 PDACLINRYEPGAKLSLHQDKDE----LDFNAPIVSVSLGLPATFLFGGLNRNDKTTRYR 171
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG +R +HGV + P LL N R+NLTFR+
Sbjct: 172 LAHGDVVVWGGSARLAYHGVMPLADGEHP--LLGNQ-----RINLTFRK 213
>gi|418867270|ref|ZP_13421730.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|392839690|gb|EJA95229.1| 2OG-Fe(II) oxygenase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
Length = 216
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P++S S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIISVSLGVPAVFQFGGLRRSDPIQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++LE GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 167 RIILEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|330823359|ref|YP_004386662.1| 2OG-Fe(II) oxygenase [Alicycliphilus denitrificans K601]
gi|329308731|gb|AEB83146.1| 2OG-Fe(II) oxygenase [Alicycliphilus denitrificans K601]
Length = 217
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C+VN Y R+ LHQDRDE G P+VS S+G A FL+G +A +
Sbjct: 116 FAPDACLVNRYEPGARMSLHQDRDER----DLGAPIVSVSLGLPAVFLWGGATRGERALR 171
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFRQ 457
V L GDV+++GG R FHGV + P P G+ R+NLT R+
Sbjct: 172 VPLRHGDVVVWGGVDRLRFHGVLPVAPGEHPATGSF---------RINLTLRK 215
>gi|332162949|ref|YP_004299526.1| alkylated DNA repair protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386309898|ref|YP_006005954.1| alkylated DNA repair protein AlkB [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418241446|ref|ZP_12867974.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|433551014|ref|ZP_20507057.1| Alkylated DNA repair protein AlkB [Yersinia enterocolitica IP
10393]
gi|318604228|emb|CBY25726.1| alkylated DNA repair protein AlkB [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325667179|gb|ADZ43823.1| alkylated DNA repair protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862301|emb|CBX72462.1| alpha-ketoglutarate-dependent dioxygenase alkB [Yersinia
enterocolitica W22703]
gi|351779119|gb|EHB21240.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|431788113|emb|CCO70097.1| Alkylated DNA repair protein AlkB [Yersinia enterocolitica IP
10393]
Length = 221
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 98/230 (42%), Gaps = 31/230 (13%)
Query: 230 WTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLG 288
W E L PG +L H+ + L+ I P F G ++ + M C
Sbjct: 14 WVEE--LAPGAFVLHHFAQDQASSLLAEITTITTVAP--FRHLITPGGYRMSVAMSNCGS 69
Query: 289 LDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI-LPAL 347
L W R Y + +D +L +M ++ M V+ + +
Sbjct: 70 LGWVSDVRGY-RYSSID---------PLTELRWPAMPQSF----MSLAVAAAQQVGFAHF 115
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
PD C++N Y +L LHQD+DE L P+VS S+G F +G K ++V
Sbjct: 116 QPDACLINRYEVGAKLSLHQDKDE----LDLRQPIVSVSLGLPGVFQFGGASREAKCQRV 171
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
LL GDV+++GG SR +HGV I +P A R+NLTFR+
Sbjct: 172 LLSEGDVVVWGGPSRLNYHGVLPIKAGFSPAA-------GAYRINLTFRR 214
>gi|432671285|ref|ZP_19906814.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE119]
gi|431210204|gb|ELF08266.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE119]
Length = 216
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 26/147 (17%)
Query: 311 VIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRD 370
+P F L QR+ + A P PD C++N Y +L LHQD+D
Sbjct: 91 AMPQSFHNLCQRAATAAG---------------YPDFQPDACLINRYAPGAKLSLHQDKD 135
Query: 371 ESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSS 430
E P+VS S+G A F +G + + +++LLE GDV+++GGESR +HG+
Sbjct: 136 EPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQP 191
Query: 431 INPNSAPGALLENTMLRPGRLNLTFRQ 457
+ P + R NLTFRQ
Sbjct: 192 LKAGFHP-------LTIDCRYNLTFRQ 211
>gi|419386787|ref|ZP_13927665.1| alkB repair system for alkylated DNA and RNA [Escherichia coli
DEC14D]
gi|378231314|gb|EHX91425.1| alkB repair system for alkylated DNA and RNA [Escherichia coli
DEC14D]
Length = 125
Score = 79.7 bits (195), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 26/146 (17%)
Query: 312 IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDE 371
+P F L QR+ + A P PD C++N Y +L LHQD+DE
Sbjct: 1 MPQSFHNLCQRAATAAG---------------YPDFQPDACLINRYAPGAKLSLHQDKDE 45
Query: 372 SRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
P+VS S+G A F +G + + +++LLE GDV+++GGESR +HG+ +
Sbjct: 46 PDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPL 101
Query: 432 NPNSAPGALLENTMLRPGRLNLTFRQ 457
P + R NLTFRQ
Sbjct: 102 KAGFHP-------LTTDCRYNLTFRQ 120
>gi|312207967|pdb|3O1M|A Chain A, Iron-Catalyzed Oxidation Intermediates Captured In A Dna
Repair Dioxygenase
gi|312207970|pdb|3O1O|A Chain A, Iron-Catalyzed Oxidation Intermediates Captured In A Dna
Repair Dioxygenase
gi|312207973|pdb|3O1P|A Chain A, Iron-Catalyzed Oxidation Intermediates Captured In A Dna
Repair Dioxygenase
gi|312207976|pdb|3O1R|A Chain A, Iron-Catalyzed Oxidation Intermediates Captured In A Dna
Repair Dioxygenase
gi|312207979|pdb|3O1S|A Chain A, Iron-Catalyzed Oxidation Intermediates Captured In A Dna
Repair Dioxygenase
gi|312207982|pdb|3O1T|A Chain A, Iron-Catalyzed Oxidation Intermediates Captured In A Dna
Repair Dioxygenase
gi|312207985|pdb|3O1U|A Chain A, Iron-Catalyzed Oxidation Intermediates Captured In A Dna
Repair Dioxygenase
gi|312207988|pdb|3O1V|A Chain A, Iron-Catalyzed Oxidation Intermediates Captured In A Dna
Repair Dioxygenase
Length = 206
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 72 DPQTNK----------PWPAMPQSFHNLCQRAATAAG---------------YPDFQPDA 106
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 107 CLINRYAPGAKLCLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 162
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 163 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTIDCRYNLTFRQ 201
>gi|185177840|pdb|3BIE|A Chain A, X-Ray Structure Of E Coli Alkb Bound To Dsdna Containing
1meaT WITH Mn And 2kg
Length = 202
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 70 DPQTNK----------PWPAMPQSFHNLCQRAATAAG---------------YPDFQPDA 104
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 105 CLINRYAPGAKLCLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 160
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 161 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTIDCRYNLTFRQ 199
>gi|386035788|ref|YP_005955701.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae KCTC 2242]
gi|419972761|ref|ZP_14488188.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|419977560|ref|ZP_14492859.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|419983324|ref|ZP_14498475.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|419989427|ref|ZP_14504403.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|419995466|ref|ZP_14510272.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|420001622|ref|ZP_14516277.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|420006474|ref|ZP_14520971.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|420012294|ref|ZP_14526608.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|420018089|ref|ZP_14532287.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|420023823|ref|ZP_14537838.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|420031864|ref|ZP_14545683.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|420037038|ref|ZP_14550695.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|420040986|ref|ZP_14554484.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|420046747|ref|ZP_14560066.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|420052457|ref|ZP_14565638.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|420060341|ref|ZP_14573341.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|420063917|ref|ZP_14576728.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|420069863|ref|ZP_14582517.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|420075407|ref|ZP_14587883.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|420081168|ref|ZP_14593478.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|421910329|ref|ZP_16340117.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421916875|ref|ZP_16346439.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|424831579|ref|ZP_18256307.1| alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424932514|ref|ZP_18350886.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|425092548|ref|ZP_18495633.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|339762916|gb|AEJ99136.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae KCTC 2242]
gi|397350158|gb|EJJ43248.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|397353901|gb|EJJ46968.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|397355495|gb|EJJ48494.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|397367233|gb|EJJ59845.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|397369550|gb|EJJ62150.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|397371946|gb|EJJ64454.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|397382183|gb|EJJ74346.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|397386137|gb|EJJ78223.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|397390804|gb|EJJ82702.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|397399367|gb|EJJ91021.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|397400059|gb|EJJ91705.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|397406054|gb|EJJ97492.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|397418520|gb|EJK09678.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|397419304|gb|EJK10453.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|397425359|gb|EJK16238.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|397433633|gb|EJK24277.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|397434476|gb|EJK25111.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|397442457|gb|EJK32808.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|397448500|gb|EJK38674.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|397453473|gb|EJK43533.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|405611774|gb|EKB84540.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|407806701|gb|EKF77952.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|410115828|emb|CCM82742.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410120592|emb|CCM89064.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|414709014|emb|CCN30718.1| alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 217
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG V+L+ + R L+ I + P F Q G + + M C L W
Sbjct: 15 LAPGAVVLRRFARERAPALLQAIADVASQSP--FRQMVTPGGYTMSVAMTNCGALGWTTD 72
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
Y + + + ++ A+ + + P SPD C++
Sbjct: 73 RHGY-------------LYAPVDPVTDQTWPPMPAVFHELALAAAAAGGYPEFSPDACLI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
N Y +L LHQD+DE L+ P+VS S+G A F +G + ++ +++LLE GDV
Sbjct: 120 NRYCPGAKLSLHQDKDEQ--DLRA--PIVSVSLGLPAIFQFGGLQRSDPLQRLLLEHGDV 175
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++GGESR +HG+ + P E R NLTFRQ
Sbjct: 176 VVWGGESRLFYHGIQPLKAGHHP----ETGDC---RYNLTFRQ 211
>gi|330993193|ref|ZP_08317130.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Gluconacetobacter
sp. SXCC-1]
gi|329759744|gb|EGG76251.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Gluconacetobacter
sp. SXCC-1]
Length = 218
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 12/109 (11%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD+C++N Y R+GLHQDR E + PVVS S G A F +G + + ++
Sbjct: 120 PDVCLINGYRPGARMGLHQDRGE-----RLDAPVVSLSFGLPAIFQWGGLQRGDPLRRIP 174
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG SR VFHG++ + P + P R NLTFR+
Sbjct: 175 LLHGDVVVWGGPSRLVFHGIAPLRAGQHP-------VTGPCRYNLTFRR 216
>gi|387127994|ref|YP_006296599.1| alkylated DNA repair protein AlkB [Methylophaga sp. JAM1]
gi|386275056|gb|AFI84954.1| Alkylated DNA repair protein AlkB [Methylophaga sp. JAM1]
Length = 223
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD+C++N Y ++GLHQD+DE +S P+VS S+G F +G + ++
Sbjct: 122 FNPDVCLMNQYEVGAKMGLHQDKDEKDFSQ----PIVSVSLGLPIIFQFGGASRNDPKQR 177
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ LE GDV+++G +R +HGV ++ P P + P R NLTFR+
Sbjct: 178 IPLEHGDVIVWGRAARRYYHGVLTLKPGQHP-------LTGPYRYNLTFRK 221
>gi|422830098|ref|ZP_16878259.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
B093]
gi|371606916|gb|EHN95503.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
B093]
Length = 216
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYVPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LAGDCRYNLTFRQ 211
>gi|89902774|ref|YP_525245.1| 2OG-Fe(II) oxygenase [Rhodoferax ferrireducens T118]
gi|89347511|gb|ABD71714.1| DNA-N1-methyladenine dioxygenase [Rhodoferax ferrireducens T118]
Length = 216
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQP--GYNDGAKLRLRMMCLGLDW-- 291
+ PG VLL + + L+ I L + P +Q GY A + C L W
Sbjct: 18 IAPGAVLLYGFARGGDAALLQAIESVLSQAPLRHWQTPGGYTMSAAMS---NCGPLGWVS 74
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
+Y + G +P+ L +R+ ++A +N +PD
Sbjct: 75 GASGYRYAALDPLSGQPWPAMPACLMDLARRAAAQA--------GYAN-------FTPDA 119
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A FL+G ++ ++ L
Sbjct: 120 CLINEYLPGAKLSLHQDKDEK--DLRA--PIVSLSLGLPAVFLFGTPSRKDRPQRWRLVH 175
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GDV+++GG SR +HGV+++ E+ +L RLNLTFR
Sbjct: 176 GDVVVWGGPSRLAYHGVAALADG-------EHALLGRRRLNLTFR 213
>gi|398852538|ref|ZP_10609193.1| alkylated DNA repair protein [Pseudomonas sp. GM80]
gi|398243996|gb|EJN29572.1| alkylated DNA repair protein [Pseudomonas sp. GM80]
Length = 221
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 101/253 (39%), Gaps = 42/253 (16%)
Query: 206 FDICLSRRRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKG 265
FD+ R + E Q+ W G P L++ L E IL+ + +
Sbjct: 6 FDLFADRETEQQPRAEQIGEQS--WLLRGFALP---LIEQLLPALESILLAAPLRHM-MT 59
Query: 266 PGGFYQPGYNDGAKLRLRMMCLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRS 323
PGGF C L W D +Y + G +P F +L +
Sbjct: 60 PGGFSMSVGTSS--------CGALGWITDRTGYRYSSVDPLSGSPWPALPPVFAELAHSA 111
Query: 324 MSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVV 383
+ A D C++N Y ++ LHQD+DE Y+ P+V
Sbjct: 112 ATRAG---------------FAGFDADSCLINRYVPGAKMSLHQDKDEKAYAA----PIV 152
Query: 384 SFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLEN 443
S S+G A FL+G ++K++++ L GD+LI+GG R FHGV I P
Sbjct: 153 SLSLGLPAMFLFGGFNRSDKSQRIALLHGDMLIWGGVDRLRFHGVLPIKQGRHP------ 206
Query: 444 TMLRPGRLNLTFR 456
L R+NLTFR
Sbjct: 207 -RLGEQRINLTFR 218
>gi|378979857|ref|YP_005227998.1| DNA repair system specific for alkylated DNA [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|421909540|ref|ZP_16339350.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|364519268|gb|AEW62396.1| DNA repair system specific for alkylated DNA [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|410116442|emb|CCM81975.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
Length = 198
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 15/115 (13%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P SPD C++N Y +L LHQD+DE L+ P+VS S+G A F +G + ++
Sbjct: 91 PEFSPDACLINRYCPGAKLSLHQDKDEQ--DLRA--PIVSVSLGLPAIFQFGGLQRSDPL 146
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG--RLNLTFRQ 457
+++LLE GDV+++GGESR +HG+ + P + G R NLTFRQ
Sbjct: 147 QRLLLEHGDVVVWGGESRLFYHGIQPLKAGHHP---------KTGDCRYNLTFRQ 192
>gi|417791742|ref|ZP_12439172.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cronobacter
sakazakii E899]
gi|333954173|gb|EGL72045.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cronobacter
sakazakii E899]
Length = 214
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 98/223 (43%), Gaps = 33/223 (14%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQTRK 297
G V+L+ + L+ I + P F G + + M C + W +
Sbjct: 18 GAVVLRRFALASAPALMAGIEAVAARSP--FRHMVTPGGYTMSVAMTNCGEVGWSTNQKG 75
Query: 298 YGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
Y QVD G +P F+ L + S A L +PD C++
Sbjct: 76 Y-LYAQVDPQTGAPWPAMPDAFRTLCDAAASAAGYL---------------DFTPDACLI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE GDV
Sbjct: 120 NRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAVFQFGGLKRNDPLKRLLLEHGDV 175
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++GG SR +HG+ + P P A E R NLTFRQ
Sbjct: 176 VVWGGPSRLFYHGIQPLKPGQHP-ATGEY------RYNLTFRQ 211
>gi|124268935|ref|YP_001022939.1| DNA-N1-methyladenine dioxygenase [Methylibium petroleiphilum PM1]
gi|124261710|gb|ABM96704.1| DNA-N1-methyladenine dioxygenase [Methylibium petroleiphilum PM1]
Length = 234
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P +PD C++N Y RL LHQDR+E +S P+VS S+G A FL+G R ++
Sbjct: 131 PGFAPDACLINRYEPGARLSLHQDRNERDFSA----PIVSVSLGLPAVFLFGGGRRSDPT 186
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+V L GDV ++GG SR +HGV ++ E+ R+NLTFR+
Sbjct: 187 TRVPLVHGDVAVWGGPSRLRYHGVLALKDG-------EHAATGNCRINLTFRR 232
>gi|399041275|ref|ZP_10736382.1| alkylated DNA repair protein [Rhizobium sp. CF122]
gi|398060385|gb|EJL52210.1| alkylated DNA repair protein [Rhizobium sp. CF122]
Length = 203
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 10/106 (9%)
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++NFY+ R+GLHQD+DE + PVVS S+G+S F G ++ L S
Sbjct: 105 CLINFYSDEARMGLHQDKDEQDLAA----PVVSISLGNSCLFRVGGLARNDRTLSFKLSS 160
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV++ G E R FHGV + P+++ LL+N GR+NLT R+
Sbjct: 161 GDVVVLGAEGRLCFHGVDKVYPSTS--TLLKNG----GRINLTLRR 200
>gi|429101099|ref|ZP_19163073.1| Alkylated DNA repair protein AlkB [Cronobacter turicensis 564]
gi|426287748|emb|CCJ89186.1| Alkylated DNA repair protein AlkB [Cronobacter turicensis 564]
Length = 214
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 79/175 (45%), Gaps = 30/175 (17%)
Query: 286 CLGLDWDPQTRKYGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVED 342
C + W + Y QVD G +P F+ L R A
Sbjct: 64 CGEVGWSTNLKGY-LYAQVDPQTGAPWPAMPDAFRALCDRRRGAAG-------------- 108
Query: 343 ILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDAN 402
P +PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G + +
Sbjct: 109 -YPDFTPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAVFQFGGLKRND 163
Query: 403 KAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++LLE GDV+++GG SR +HG+ + P P R NLTFRQ
Sbjct: 164 PLKRLLLEHGDVVVWGGPSRLFYHGIQPLKPGQHPSTGEY-------RYNLTFRQ 211
>gi|340788425|ref|YP_004753890.1| alkylated DNA repair protein AlkB [Collimonas fungivorans Ter331]
gi|340553692|gb|AEK63067.1| Alkylated DNA repair protein AlkB [Collimonas fungivorans Ter331]
Length = 228
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y RL LHQD+DE Y+ P+VS S+G A FL+G ++KA +V
Sbjct: 129 PDACLINRYQPGTRLTLHQDKDEQDYAA----PIVSVSLGIPAMFLFGGHERSDKAARVP 184
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG R +HGV + E+ +L R+NLTFR+
Sbjct: 185 LFHGDVVVWGGVDRLRYHGVLPLKEA-------EHPLLGGQRINLTFRK 226
>gi|422365132|ref|ZP_16445636.1| alkylated DNA repair protein AlkB [Escherichia coli MS 153-1]
gi|315292166|gb|EFU51518.1| alkylated DNA repair protein AlkB [Escherichia coli MS 153-1]
Length = 216
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 74/166 (44%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHPPT-------TDCRYNLTFRQ 211
>gi|429335931|ref|ZP_19216543.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas putida
CSV86]
gi|428759413|gb|EKX81714.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas putida
CSV86]
Length = 215
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y RL LHQDR+E +S P+VS S+G A FL G A++ +KV
Sbjct: 116 PDACLINSYLPGNRLTLHQDRNERDFSQ----PIVSVSLGLPATFLLGGHERADRTQKVG 171
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+ GDVL++GGE R FHG+ + S P +L R+N T R+
Sbjct: 172 LQHGDVLVWGGEDRLRFHGILPLKDGSHP-------VLGARRINFTLRK 213
>gi|2055386|gb|AAC45302.1| AlkB [Caulobacter crescentus CB15]
Length = 192
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 60/116 (51%), Gaps = 16/116 (13%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P PD C+VN Y T R+GLHQDRDE+ P++S S+GD+A F G +
Sbjct: 86 PETPPDSCLVNLYATGARMGLHQDRDEA----DPRFPLLSISLGDTAVFRIGGVNRKDPT 141
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSA---PGALLENTMLRPGRLNLTFRQ 457
+ L SGDV G +R FHGV I P S+ PG GR+NLT R+
Sbjct: 142 RSLRLASGDVCRLLGPARLAFHGVDRILPGSSSLVPGG---------GRINLTLRR 188
>gi|329298027|ref|ZP_08255363.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Plautia stali
symbiont]
Length = 213
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 36/178 (20%)
Query: 286 CLGLDWDPQTRKYGKKRQ--VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C W +R Y Q G + +P+ F+ L Q++ EA
Sbjct: 64 CGDFGWSTDSRGYQYTEQDVSSGRKWPPMPALFRTLAQQTAQEAG--------------- 108
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
+PD C++N Y +L LHQD+DE L++ P+VS S+G A F +G +
Sbjct: 109 FAGFNPDACLINRYEPGAKLTLHQDKDEK--DLRQ--PIVSVSLGLPALFQFGGFERGDA 164
Query: 404 AEKVLLESGDVLIFGGESRHVFHGV----SSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++VLLE GD++++GG SR +HG+ + I+P + GA R NLTFR+
Sbjct: 165 TQRVLLEHGDIVVWGGPSRLRYHGILPLKAGIHPQA--GAF---------RYNLTFRR 211
>gi|311278819|ref|YP_003941050.1| 2OG-Fe(II) oxygenase [Enterobacter cloacae SCF1]
gi|308748014|gb|ADO47766.1| 2OG-Fe(II) oxygenase [Enterobacter cloacae SCF1]
Length = 223
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 98/226 (43%), Gaps = 35/226 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG V+L+ Y + L+ I Q P F Q G + + M C L W D
Sbjct: 16 LAPGAVILRRYAAGCAERLLEAIHQIAQLSP--FRQMVTPGGYTMSVAMTNCGELGWTTD 73
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y + G +P+ F++ + EA D +PD C
Sbjct: 74 AGGYLYAPGDPLTGNPWPAMPALFRRFALEAAGEA-----------GYAD----FTPDAC 118
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +VLLE G
Sbjct: 119 LINRYAPGAKLSLHQDKDEK--DLRA--PIVSVSLGLPAVFQFGGAKRNDPLRRVLLEHG 174
Query: 413 DVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFR 456
DV+++GG SR +HG+ + P GA R NLTFR
Sbjct: 175 DVVVWGGASRLFYHGIQPLKSGHHPATGAY---------RYNLTFR 211
>gi|70730772|ref|YP_260513.1| alkylated DNA repair protein AlkB [Pseudomonas protegens Pf-5]
gi|68345071|gb|AAY92677.1| alkylated DNA repair protein AlkB [Pseudomonas protegens Pf-5]
Length = 226
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P +PD C++N Y ++ LHQD++E YS P+VS S+G A FL+G + ++K
Sbjct: 122 FPGFAPDSCLINCYRPGAKMSLHQDKNERDYSA----PIVSLSLGLPAIFLFGGRQRSDK 177
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++V L GDV+++GG R +HGV ++ P +L R+NLT R+
Sbjct: 178 SQRVALLHGDVVVWGGVDRLRYHGVLALKDGHHP-------LLGQQRINLTLRR 224
>gi|440736939|ref|ZP_20916521.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
fluorescens BRIP34879]
gi|440382596|gb|ELQ19091.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
fluorescens BRIP34879]
Length = 221
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 11/110 (10%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y ++ LHQD++E Y+ PVVS S+G A FL+G ++K +K
Sbjct: 120 FAPDACLINRYVPGAKMSLHQDKNERHYAA----PVVSVSLGLPAIFLFGGHARSDKPQK 175
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
V L GDV+++GG R FHGV I P ++ P R+NLT R
Sbjct: 176 VSLFHGDVVVWGGVDRLRFHGVMPIKDGKHP-------IMGPQRINLTLR 218
>gi|389840228|ref|YP_006342312.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cronobacter
sakazakii ES15]
gi|387850704|gb|AFJ98801.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cronobacter
sakazakii ES15]
Length = 214
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 98/223 (43%), Gaps = 33/223 (14%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQTRK 297
G V+L+ + L+ I + P F G + + M C + W +
Sbjct: 18 GAVVLRRFALASAPALMAGIEAVAARSP--FRHMVTPGGYTMSVAMTNCGEVGWSTNQKG 75
Query: 298 YGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
Y QVD G +P F+ L + S A L +PD C++
Sbjct: 76 Y-LYAQVDPQTGTPWPAMPDAFRTLCDAAASAAGYL---------------DFTPDACLI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE GDV
Sbjct: 120 NRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAVFQFGGLKRNDPLKRLLLEHGDV 175
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++GG SR +HG+ + P P A E R NLTFRQ
Sbjct: 176 VVWGGPSRLFYHGIQPLKPGQHP-ATGEY------RYNLTFRQ 211
>gi|331647867|ref|ZP_08348959.1| alkylated DNA repair protein AlkB [Escherichia coli M605]
gi|432398040|ref|ZP_19640821.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE25]
gi|432407268|ref|ZP_19649977.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE28]
gi|432723664|ref|ZP_19958584.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE17]
gi|432728251|ref|ZP_19963130.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE18]
gi|432741945|ref|ZP_19976664.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE23]
gi|432991252|ref|ZP_20179916.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE217]
gi|433111463|ref|ZP_20297328.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE150]
gi|331043591|gb|EGI15729.1| alkylated DNA repair protein AlkB [Escherichia coli M605]
gi|430916144|gb|ELC37222.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE25]
gi|430930027|gb|ELC50536.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE28]
gi|431266218|gb|ELF57780.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE17]
gi|431273940|gb|ELF65014.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE18]
gi|431283636|gb|ELF74495.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE23]
gi|431495334|gb|ELH74920.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE217]
gi|431628767|gb|ELI97143.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE150]
Length = 216
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHHLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYVPGVKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKVGGHP-------LTTDCRYNLTFRQ 211
>gi|447916685|ref|YP_007397253.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas poae
RE*1-1-14]
gi|445200548|gb|AGE25757.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas poae
RE*1-1-14]
Length = 221
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 11/110 (10%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y ++ LHQD++E Y+ PVVS S+G A FL+G ++K +K
Sbjct: 120 FAPDACLINRYVPGAKMSLHQDKNERHYAA----PVVSVSLGLPAIFLFGGHARSDKPQK 175
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
V L GDV+++GG R FHGV I P ++ P R+NLT R
Sbjct: 176 VSLFHGDVVVWGGVDRLRFHGVMPIKDGKHP-------IMGPQRINLTLR 218
>gi|209966121|ref|YP_002299036.1| alkylated DNA repair protein [Rhodospirillum centenum SW]
gi|209959587|gb|ACJ00224.1| alkylated DNA repair protein, putative [Rhodospirillum centenum SW]
Length = 207
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
Query: 349 PDICIVNFYNTSG-RLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
P C+VN Y G RLGLH+D DE P+++ S+GD+A F G + +
Sbjct: 103 PQCCLVNLYRGGGARLGLHRDEDEE----AADAPILNVSLGDTAVFRLGGRQRGDPTRSF 158
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+ SG V++F GE+R FHGV I P S+ ALL GRLNLT R+
Sbjct: 159 LVPSGTVMVFAGEARAAFHGVDRILPGSS--ALLPEG----GRLNLTLRR 202
>gi|409405499|ref|ZP_11253961.1| DNA repair system specific for alkylated DNA repair protein
[Herbaspirillum sp. GW103]
gi|386434048|gb|EIJ46873.1| DNA repair system specific for alkylated DNA repair protein
[Herbaspirillum sp. GW103]
Length = 217
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y + R+ LHQD++E L P+VS S+G A FL+G +K +++
Sbjct: 118 PDACLINRYEPAARMSLHQDKNE----LDMTQPIVSVSLGLPATFLFGGMARTDKPQRMR 173
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
LESGDV+++GG +R FHG+ + E+ + R NLTFR+
Sbjct: 174 LESGDVVVWGGPARLAFHGIDPLREG-------EHALTGRCRYNLTFRR 215
>gi|120612626|ref|YP_972304.1| DNA-N1-methyladenine dioxygenase [Acidovorax citrulli AAC00-1]
gi|120591090|gb|ABM34530.1| DNA-N1-methyladenine dioxygenase [Acidovorax citrulli AAC00-1]
Length = 224
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 97/231 (41%), Gaps = 43/231 (18%)
Query: 236 LRPGMVLLKHYL-----TIREQILIVRICQELG--KGPGGFYQPGYNDGAKLRLRMMCLG 288
L PG LL+ + T+RE++L V + PGG A C
Sbjct: 26 LGPGAALLRGFALPVAATLREEVLAVARAAPWRHMETPGGR--------AMSVATTSCGR 77
Query: 289 LDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPA 346
L W D + +Y G +P ++L + + + A P
Sbjct: 78 LGWVSDRRGYRYAPLDPGSGTAWPAMPDALRRLAREAAAHAG---------------FPD 122
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD C+VN Y RL LHQDRDE + L+ P+VS S+G A FL+G +
Sbjct: 123 FEPDSCLVNRYAPGARLSLHQDRDE--HDLQA--PIVSVSLGLPAVFLWGGFARTGPVAR 178
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V L+ GDV+++GG R FHGV + P E R+NLTFR+
Sbjct: 179 VPLQHGDVVVWGGPDRLRFHGVQPVKDGLHPEWGAE-------RVNLTFRK 222
>gi|338974202|ref|ZP_08629564.1| alkylated DNA repair protein AlkB [Bradyrhizobiaceae bacterium
SG-6C]
gi|338232929|gb|EGP08057.1| alkylated DNA repair protein AlkB [Bradyrhizobiaceae bacterium
SG-6C]
Length = 215
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 96/229 (41%), Gaps = 31/229 (13%)
Query: 232 REGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLD 290
R+ L PG +LL + E LI + + + P F G ++ + M C +
Sbjct: 13 RDVQLVPGAMLLAGFARPLEAALIGAVTAIIARAP--FRHLVTPGGHRMSVAMTNCGRVG 70
Query: 291 W--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALS 348
W D +Y G +P F L R+ +A
Sbjct: 71 WVSDRTGYRYDTNDPDSGLPWPSMPETFADLALRAADKAG---------------FADFR 115
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y +L LHQD+DE L P+VS S+G A FL+G +K +
Sbjct: 116 PDACLINRYEPGAKLSLHQDKDE----LDFNAPIVSVSLGLPATFLFGGLNRNDKTTRYR 171
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG +R +HGV + P +L R+NLTFR+
Sbjct: 172 LAHGDVVVWGGPARLTYHGVMPLADGDHP-------LLGSQRINLTFRK 213
>gi|134094712|ref|YP_001099787.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions, repair of alkylated DNA [Herminiimonas
arsenicoxydans]
gi|133738615|emb|CAL61660.1| Alkylated DNA repair protein AlkB [Herminiimonas arsenicoxydans]
Length = 216
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD C++N Y+ R+ LHQDRDE +S P+VS S+G A FL+G R +KA +
Sbjct: 115 FKPDACLINRYDPGARMSLHQDRDERDFSQ----PIVSVSLGIPAVFLFGGMRREDKAMR 170
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ L GDV+++GG R +HGV + S P L R+NLT R+
Sbjct: 171 ISLTHGDVVVWGGADRLRYHGVLPLKMASHPS-------LGEHRINLTLRK 214
>gi|425305941|ref|ZP_18695652.1| alkylated DNA repair protein AlkB [Escherichia coli N1]
gi|408228566|gb|EKI52100.1| alkylated DNA repair protein AlkB [Escherichia coli N1]
Length = 216
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRAATAAG---------------YPDFLPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTGDCRYNLTFRQ 211
>gi|417286503|ref|ZP_12073792.1| alkylated DNA repair protein AlkB [Escherichia coli TW07793]
gi|386249962|gb|EII96131.1| alkylated DNA repair protein AlkB [Escherichia coli TW07793]
Length = 216
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHHLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYVPGAKLSLHQDKDEPDLRA----PIVSGSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKVGVHP-------LTTDCRYNLTFRQ 211
>gi|330015766|ref|ZP_08308262.1| putative alkylated DNA repair protein AlkB, partial [Klebsiella sp.
MS 92-3]
gi|328530585|gb|EGF57448.1| putative alkylated DNA repair protein AlkB [Klebsiella sp. MS 92-3]
Length = 120
Score = 79.3 bits (194), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P SPD C++N Y +L LHQD+DE P+VS S+G A F +G + ++
Sbjct: 13 PEFSPDACLINRYCPGAKLSLHQDKDEQDLRA----PIVSVSLGLPAIFQFGGLQRSDPL 68
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++LLE GDV+++GGESR +HG+ + P R NLTFRQ
Sbjct: 69 QRLLLEHGDVVVWGGESRLFYHGIQPLKAGHHPET-------GDCRYNLTFRQ 114
>gi|428943302|ref|ZP_19016216.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Klebsiella
pneumoniae VA360]
gi|426297006|gb|EKV59554.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Klebsiella
pneumoniae VA360]
Length = 123
Score = 79.3 bits (194), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P SPD C++N Y +L LHQD+DE P+VS S+G A F +G + ++
Sbjct: 16 PEFSPDACLINRYCPGAKLSLHQDKDEQDLRA----PIVSVSLGLPAIFQFGGLQRSDPL 71
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++LLE GDV+++GGESR +HG+ + P R NLTFRQ
Sbjct: 72 QRLLLEHGDVVVWGGESRLFYHGIQPLKAGHHPET-------GDCRYNLTFRQ 117
>gi|334131392|ref|ZP_08505156.1| Alkylated DNA repair protein AlkB [Methyloversatilis universalis
FAM5]
gi|333443559|gb|EGK71522.1| Alkylated DNA repair protein AlkB [Methyloversatilis universalis
FAM5]
Length = 214
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C++N Y RL LHQDR+E + P+VS S+G A FL+G + ++
Sbjct: 110 FPGFVPDACLINRYQPGTRLTLHQDRNER----DECAPIVSVSLGIPATFLFGGLQRSDP 165
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++ L GDV+++GG SR VFHGV P E+ + R+NLTFR+
Sbjct: 166 VRRLRLVHGDVVVWGGPSRFVFHGVQ-------PLMHAEHPLTGACRINLTFRR 212
>gi|424777452|ref|ZP_18204416.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Alcaligenes sp.
HPC1271]
gi|422887519|gb|EKU29921.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Alcaligenes sp.
HPC1271]
Length = 215
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D +Y G +P+ FK+L+ R I +S +
Sbjct: 66 CGDLGWISDEHGYRYSPTDPQSGLAWPAMPAVFKELLTR--------IAQESGQGPFQ-- 115
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
PD C++N+Y+ + LHQDR+E P+VS S+G A FL+G + ++
Sbjct: 116 -----PDTCLINYYDEQAHMSLHQDRNERNLQH----PIVSVSLGREALFLWGGAKRSDP 166
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ L GDVL++ G SR FHGV + + P + GR+NLTFR+
Sbjct: 167 VRTLRLRDGDVLVWWGPSRLNFHGVRRLEGPAHP-------VWGTGRVNLTFRK 213
>gi|398799262|ref|ZP_10558554.1| alkylated DNA repair protein [Pantoea sp. GM01]
gi|398099130|gb|EJL89402.1| alkylated DNA repair protein [Pantoea sp. GM01]
Length = 213
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 277 GAKLRLRMM-CLGLDWDPQTRKYGKKRQ--VDGCEPSVIPSEFKQLVQRSMSEAHALIKM 333
G ++ + M C W +R Y Q G +P+ F++L Q++ EA
Sbjct: 54 GHRMSVAMTNCGDFGWSTDSRGYQYTEQDGNSGHHWPPMPALFRELAQQTAGEAG----- 108
Query: 334 DSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEF 393
+PD C++N Y +L LHQD+DE L++ P+VS S+G A F
Sbjct: 109 ----------FSGYNPDACLINRYEPGAKLTLHQDKDEK--DLRQ--PIVSVSLGLPAVF 154
Query: 394 LYGDERDANKAEKVLLESGDVLIFGGESRHVFHGV----SSINPNSAPGALLENTMLRPG 449
+G + ++VLLE GD++++GG SR +HG+ + I+P + GA
Sbjct: 155 QFGGFERGDATQRVLLEHGDIVVWGGPSRLRYHGILPLKAGIHPQA--GAF--------- 203
Query: 450 RLNLTFRQ 457
R NLTFR+
Sbjct: 204 RYNLTFRR 211
>gi|410089516|ref|ZP_11286131.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
viridiflava UASWS0038]
gi|409763227|gb|EKN48210.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
viridiflava UASWS0038]
Length = 225
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 28/174 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W DP +Y G +P F +L Q + +A D
Sbjct: 76 CGSLGWVTDPHGYRYSHTNPQTGQSWPSMPDIFLELAQDAAQKA-----------GFADF 124
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
+P D C++N Y ++ LHQD+DE + PVVS S+G A F +G + +++
Sbjct: 125 VP----DACLINRYVPGAKMSLHQDKDEHDHRW----PVVSVSLGIPAIFQFGGLQRSDR 176
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
E++ L GDV+++GG+ R FHG+ + P P L R+NLTFR+
Sbjct: 177 PERISLFHGDVVVWGGKDRLRFHGILPVKPAVHP-------QLGEQRINLTFRK 223
>gi|428936973|ref|ZP_19010326.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Klebsiella
pneumoniae JHCK1]
gi|426297246|gb|EKV59765.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Klebsiella
pneumoniae JHCK1]
Length = 122
Score = 79.0 bits (193), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P SPD C++N Y +L LHQD+DE P+VS S+G A F +G + ++
Sbjct: 15 PEFSPDACLINRYCPGAKLSLHQDKDEQDLRA----PIVSVSLGLPAIFQFGGLQRSDPL 70
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++LLE GDV+++GGESR +HG+ + P R NLTFRQ
Sbjct: 71 QRLLLEHGDVVVWGGESRLFYHGIQPLKAGHHPET-------GDCRYNLTFRQ 116
>gi|428149435|ref|ZP_18997251.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|427540656|emb|CCM93389.1| Alkylated DNA repair protein AlkB [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 169
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 11/113 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P SPD C++N Y +L LHQD+DE L+ P+VS S+G A F +G + ++
Sbjct: 62 PEFSPDACLINRYCPGAKLSLHQDKDEQ--DLRA--PIVSVSLGLPAIFQFGGLQRSDPL 117
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++LLE GDV+++GGESR +HG+ + P E R NLTFRQ
Sbjct: 118 QRLLLEHGDVVVWGGESRLFYHGIQPLKAGHHP----ETGDC---RYNLTFRQ 163
>gi|114571541|ref|YP_758221.1| DNA-N1-methyladenine dioxygenase [Maricaulis maris MCS10]
gi|114342003|gb|ABI67283.1| DNA-N1-methyladenine dioxygenase [Maricaulis maris MCS10]
Length = 212
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 17/114 (14%)
Query: 350 DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLL 409
+ C+VN+Y R+GLH D DE VVS S+GD A F G + K ++L
Sbjct: 106 EACLVNWYAPDSRMGLHVDWDEEATDAA----VVSISLGDKARFRIGGPQRGGKTGSMVL 161
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP------GRLNLTFRQ 457
SGDV++ GGE+R +HGV I P + +T+L P GR+NLT R+
Sbjct: 162 SSGDVVVLGGEARRCYHGVDRIYPGT-------STLLPPDAFPGGGRINLTMRR 208
>gi|376242000|ref|YP_005132852.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
CDCE 8392]
gi|376253464|ref|YP_005141923.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
PW8]
gi|372105242|gb|AEX71304.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
CDCE 8392]
gi|372116548|gb|AEX69018.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
PW8]
Length = 232
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 24/228 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKG----PGGFYQPGYNDGAKLRLRMMCLGLDW 291
+ PG+ L +L + +Q +VR +E+ + P +P G ++ + + LG W
Sbjct: 13 IAPGVAHLPGWLGVDKQAELVREIREIARTYADTPMAMLRPTLKSGGQMSVYQLHLGRYW 72
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
Y R VD + +P L + + A ++ +++ + P++
Sbjct: 73 -----HYPSYRYVDKIAGTTVPPVPDSLAALAPAALRAAAEVAEELAPWVE---TFVPEM 124
Query: 352 CIVNFYNTSGRLGLHQDR-DESRYSLKKGLPVVSFSVGDSAEFLYG-DERDANKAEKVLL 409
+VN+Y R+G+H D +ESR PV+S S+GD A F G E + V L
Sbjct: 125 VLVNYYPPGSRMGMHVDEFEESR------APVISVSIGDEALFRMGHTESRTQPWDDVTL 178
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGD+++FGG R +HGV +N + P + L GR+N+T RQ
Sbjct: 179 CSGDLVVFGGPKRFAYHGVVRVNDATLP----DGCGLEQGRINITIRQ 222
>gi|254295468|ref|YP_003061491.1| 2OG-Fe(II) oxygenase [Hirschia baltica ATCC 49814]
gi|254043999|gb|ACT60794.1| 2OG-Fe(II) oxygenase [Hirschia baltica ATCC 49814]
Length = 199
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 67/111 (60%), Gaps = 14/111 (12%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYG--DERDANKAEK 406
P C+VN+Y+ + ++GLH D DE + PVVS S+GDSA F G + RD K+ K
Sbjct: 98 PQACLVNYYDENAKMGLHCDGDEEDINA----PVVSISLGDSARFRLGGLNRRDPTKSFK 153
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGDV+I GG++R +HG+ I S+ LL+N GRLNLT R+
Sbjct: 154 --LNSGDVIILGGQARLAYHGIDRIYGGSS--TLLKNG----GRLNLTLRR 196
>gi|375115168|ref|ZP_09760338.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|322715314|gb|EFZ06885.1| DNA repair system protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
Length = 216
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPIQ 166
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++LLE GD++++GGESR +HG+ + P M R NL FRQ
Sbjct: 167 RILLEHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLIFRQ 211
>gi|429121188|ref|ZP_19181831.1| Alkylated DNA repair protein AlkB [Cronobacter sakazakii 680]
gi|426324344|emb|CCK12568.1| Alkylated DNA repair protein AlkB [Cronobacter sakazakii 680]
Length = 214
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 33/223 (14%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQTRK 297
G V+L+ + L+ I + P F G + + M C + W +
Sbjct: 18 GAVVLRRFALASAPALMAGIEAVAARSP--FRHMVTPGGYTMSVAMTNCGEVGWSTNQKG 75
Query: 298 YGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
Y QVD G +P F+ L + S A + +PD C++
Sbjct: 76 Y-LYAQVDPQTGAPWPAMPDAFRTLCDAAASAAGYT---------------SFTPDACLI 119
Query: 355 NFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDV 414
N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE GDV
Sbjct: 120 NRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAVFQFGGLKRNDPLKRLLLEHGDV 175
Query: 415 LIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++GG SR +HG+ + P P A E R NLTFRQ
Sbjct: 176 VVWGGPSRLFYHGIQPLKPGQHP-ATGEY------RYNLTFRQ 211
>gi|328545942|ref|YP_004306051.1| 2OG-Fe(II) oxygenase [Polymorphum gilvum SL003B-26A1]
gi|326415682|gb|ADZ72745.1| Oxidoreductase, 2OG-Fe(II) oxygenase family [Polymorphum gilvum
SL003B-26A1]
Length = 206
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 13/118 (11%)
Query: 342 DILPALS-PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
++ PA P+ C++NFY R+GLHQDRDE + PVVS S+GD+A F G
Sbjct: 96 EVAPAAPLPEACLINFYEPGARMGLHQDRDEETFD----APVVSVSLGDTAMFRIGGLSR 151
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP-GRLNLTFRQ 457
++ + L SGDV + +R FHG+ I + +T+L+ GR+NLT R+
Sbjct: 152 KDRTASLRLASGDVAVLASTARLAFHGIDRILAGT-------STLLKAGGRINLTLRR 202
>gi|421725239|ref|ZP_16164436.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
M5al]
gi|410373954|gb|EKP28638.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
M5al]
Length = 160
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 15/112 (13%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y +L LHQD+DE ++L+ P+VS S+G A F +G R + ++
Sbjct: 56 FTPDACLINRYQPGAKLSLHQDKDE--HNLRA--PIVSVSLGLPAIFQFGGLRRNDPLQR 111
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFR 456
VLLE GDV+++GGESR +HG+ + P GA R NLTFR
Sbjct: 112 VLLEHGDVVVWGGESRLFYHGIQPLKEGIHPETGAC---------RYNLTFR 154
>gi|221232948|ref|YP_002515384.1| alkylated DNA repair protein AlkB [Caulobacter crescentus NA1000]
gi|220962120|gb|ACL93476.1| alkylated DNA repair protein AlkB [Caulobacter crescentus NA1000]
Length = 206
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 92/227 (40%), Gaps = 41/227 (18%)
Query: 238 PGMVLLKHYLTIREQ-ILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDWDPQT 295
PG + L I Q L+ + + P Y+ Y G + + M LG L W
Sbjct: 10 PGFDVWPGLLDISAQRALVEAVLAGAEQAPFSNYRTAY--GKPMSVAMTALGSLGWTSDA 67
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDIL--PALSPDICI 353
R Y + V R M + ++ +L P PD C+
Sbjct: 68 RGY-------------------RYVDRHPETGRPWPDMPPALLDLWTVLGDPETPPDSCL 108
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGD 413
VN Y R+GLHQDRDE+ PV+S S+GD+A F G + + L SGD
Sbjct: 109 VNLYRDGARMGLHQDRDEA----DPRFPVLSISLGDTAVFRIGGVNRKDPTRSLRLASGD 164
Query: 414 VLIFGGESRHVFHGVSSINPNSA---PGALLENTMLRPGRLNLTFRQ 457
V G +R FHGV I P S+ PG GR+NLT R+
Sbjct: 165 VCRLLGPARLAFHGVDRILPGSSSLVPGG---------GRINLTLRR 202
>gi|260598661|ref|YP_003211232.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cronobacter
turicensis z3032]
gi|260217838|emb|CBA32345.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Cronobacter
turicensis z3032]
Length = 214
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P +PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G + +
Sbjct: 110 PDFTPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAVFQFGGLKRNDPL 165
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++LLE GDV+++GG SR +HG+ + P P R NLTFRQ
Sbjct: 166 KRLLLEHGDVVVWGGPSRLFYHGIQPLKPGQHP-------TTGEYRYNLTFRQ 211
>gi|365890377|ref|ZP_09428911.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. STM 3809]
gi|365333760|emb|CCE01442.1| Alkylated DNA repair protein alkB [Bradyrhizobium sp. STM 3809]
Length = 194
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 26/147 (17%)
Query: 311 VIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRD 370
+P F++L + + EA +PD C++N Y ++ LHQDRD
Sbjct: 72 AMPPLFRKLAENAAGEAG---------------FAGFAPDACLINRYEPGAKMSLHQDRD 116
Query: 371 ESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSS 430
E P+VS S+G A FL+G + +K ++ L GDV+++GG +R FHGV
Sbjct: 117 ERDIDA----PIVSVSLGLPATFLFGGLKRTDKTQRHRLVHGDVVVWGGPARLAFHGV-- 170
Query: 431 INPNSAPGALLENTMLRPGRLNLTFRQ 457
AP A E+ L R+NLTFR+
Sbjct: 171 -----APLADGEHARLGRRRINLTFRR 192
>gi|399005151|ref|ZP_10707747.1| alkylated DNA repair protein [Pseudomonas sp. GM17]
gi|398127318|gb|EJM16730.1| alkylated DNA repair protein [Pseudomonas sp. GM17]
Length = 222
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 11/128 (8%)
Query: 330 LIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGD 389
+++ ++ + + PD C++N Y R+ LHQD+DE Y P+VS S+G
Sbjct: 104 VLRELARAAATQAGFAGFEPDACLINHYVPGARMSLHQDKDERDYDA----PIVSVSLGL 159
Query: 390 SAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG 449
A F G ER + + +V L GDV+++GG R +HGV + + P +L P
Sbjct: 160 PAVFQLGGERRSERPLRVPLLHGDVVVWGGVDRLRYHGVLPLKEGTHP-------LLGPR 212
Query: 450 RLNLTFRQ 457
R+NLTFR+
Sbjct: 213 RINLTFRR 220
>gi|383317405|ref|YP_005378247.1| alkylated DNA repair protein [Frateuria aurantia DSM 6220]
gi|379044509|gb|AFC86565.1| alkylated DNA repair protein [Frateuria aurantia DSM 6220]
Length = 215
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 28/174 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D +Y + G +P F +L +++ + A
Sbjct: 66 CGTLGWHSDEAGYRYQPVDPLSGHPWPAMPPAFAELARQAAALAG--------------- 110
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C++N Y L LHQDR+E + G PVVS S+G A FL+G +
Sbjct: 111 YPDFHPDACLINRYRPGAGLSLHQDRNEQDH----GQPVVSVSLGMEARFLWGGLQRGQT 166
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
A K+ L GD+L++GG R FHG++ + P L+ R+NLTFR+
Sbjct: 167 ALKLPLYHGDILVWGGPDRLRFHGIAPLQGPPHPEWGLK-------RINLTFRR 213
>gi|358639332|dbj|BAL26629.1| alkylated DNA repair protein AlkB [Azoarcus sp. KH32C]
Length = 216
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 11/113 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P +PD C++N Y R+ LHQDRDE + P+VS S+G A FL G +
Sbjct: 112 FPGFAPDACLINRYAPGARMSLHQDRDERNLAA----PIVSVSLGLPAVFLLGGMSRRDP 167
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
++LLE GD +++GGE R +HGV + + +L R+NLTFR
Sbjct: 168 QRRILLEHGDAIVWGGEDRLRYHGVQPVKDG-------RHGLLGALRINLTFR 213
>gi|387893927|ref|YP_006324224.1| alkylated DNA repair protein AlkB [Pseudomonas fluorescens A506]
gi|387160330|gb|AFJ55529.1| alkylated DNA repair protein AlkB [Pseudomonas fluorescens A506]
Length = 221
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 314 SEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESR 373
S F Q+ ++ + + +E PD C++N Y ++ LHQD++E
Sbjct: 87 SPFDPRNQQPWPAMPETLRQLAVTAAIEAGFSGFLPDACLINRYVPGAKMSLHQDKNERN 146
Query: 374 YSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINP 433
YS PVVS S+G A FL+G ++ +KV L GDV+++GG R FHGV I
Sbjct: 147 YSA----PVVSVSLGLPAIFLFGGHARSDNTQKVSLFHGDVVVWGGVDRLRFHGVMPIKD 202
Query: 434 NSAPGALLENTMLRPGRLNLTFR 456
++++ P R+NLTFR
Sbjct: 203 GL-------HSIMGPQRINLTFR 218
>gi|16124265|ref|NP_418829.1| DNA alkylation damage repair protein AlkB [Caulobacter crescentus
CB15]
gi|239977066|sp|P0CAT7.1|ALKB_CAUCR RecName: Full=Alpha-ketoglutarate-dependent dioxygenase AlkB
homolog; AltName: Full=DNA oxidative demethylase AlkB
gi|239977078|sp|B8GWW6.2|ALKB_CAUCN RecName: Full=Alpha-ketoglutarate-dependent dioxygenase AlkB
homolog; AltName: Full=DNA oxidative demethylase AlkB
gi|13421095|gb|AAK21997.1| DNA alkylation damage repair protein AlkB [Caulobacter crescentus
CB15]
Length = 220
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 92/227 (40%), Gaps = 41/227 (18%)
Query: 238 PGMVLLKHYLTIREQ-ILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDWDPQT 295
PG + L I Q L+ + + P Y+ Y G + + M LG L W
Sbjct: 24 PGFDVWPGLLDISAQRALVEAVLAGAEQAPFSNYRTAY--GKPMSVAMTALGSLGWTSDA 81
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDIL--PALSPDICI 353
R Y + V R M + ++ +L P PD C+
Sbjct: 82 RGY-------------------RYVDRHPETGRPWPDMPPALLDLWTVLGDPETPPDSCL 122
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGD 413
VN Y R+GLHQDRDE+ PV+S S+GD+A F G + + L SGD
Sbjct: 123 VNLYRDGARMGLHQDRDEA----DPRFPVLSISLGDTAVFRIGGVNRKDPTRSLRLASGD 178
Query: 414 VLIFGGESRHVFHGVSSINPNSA---PGALLENTMLRPGRLNLTFRQ 457
V G +R FHGV I P S+ PG GR+NLT R+
Sbjct: 179 VCRLLGPARLAFHGVDRILPGSSSLVPGG---------GRINLTLRR 216
>gi|157371400|ref|YP_001479389.1| 2OG-Fe(II) oxygenase [Serratia proteamaculans 568]
gi|157323164|gb|ABV42261.1| 2OG-Fe(II) oxygenase [Serratia proteamaculans 568]
Length = 215
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 66/109 (60%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y+ +L LHQD+DE + G P+VS S+G A F +G + +++A+++
Sbjct: 116 PDSCLMNRYDPGSKLSLHQDKDEHDF----GSPIVSVSLGLPAVFQFGGMQRSDRAQRIP 171
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG SR FHG+ I ++++ P R+N+T R+
Sbjct: 172 LAHGDVVVWGGPSRLCFHGIMPIKEG-------YHSLVGPHRINITLRK 213
>gi|319761490|ref|YP_004125427.1| 2OG-Fe(II) oxygenase [Alicycliphilus denitrificans BC]
gi|317116051|gb|ADU98539.1| 2OG-Fe(II) oxygenase [Alicycliphilus denitrificans BC]
Length = 217
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C+VN Y R+ LHQDRDE + P+VS S+G A FL+G +A +
Sbjct: 116 FAPDACLVNRYEPGARMSLHQDRDERDLAA----PIVSVSLGLPAVFLWGGATRGERALR 171
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V L GDV+++GG R FHGV + P E+ R+NLT R+
Sbjct: 172 VPLHHGDVVVWGGVDRLRFHGVLPVAPG-------EHPATGSCRINLTLRK 215
>gi|77459162|ref|YP_348668.1| DNA-N1-methyladenine dioxygenase [Pseudomonas fluorescens Pf0-1]
gi|77383165|gb|ABA74678.1| alkylated DNA repair protein [Pseudomonas fluorescens Pf0-1]
Length = 220
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 81/173 (46%), Gaps = 28/173 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D +Y + V +P F++L Q + +K + D
Sbjct: 71 CGALGWITDRSGYRYSSEDPVSHRPWPAMPEVFRELAQAA-----------AKRAGFADF 119
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
+P D C++N Y ++ LHQD+DE+ Y P+VS S+G A F++G ++
Sbjct: 120 MP----DSCLINRYVPGAKMSLHQDKDENAYEA----PIVSLSLGLPATFVFGGFARGDR 171
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
++K+ L GD++I+GG R +HG+ I P P L R NLTFR
Sbjct: 172 SQKISLLHGDMVIWGGVDRLRYHGILPIKPGRHP-------RLGEQRFNLTFR 217
>gi|417159712|ref|ZP_11996740.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0741]
gi|386175163|gb|EIH47155.1| alkylated DNA repair protein AlkB [Escherichia coli 99.0741]
Length = 216
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 76/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGE R +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGELRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|417138880|ref|ZP_11982407.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0259]
gi|417308678|ref|ZP_12095520.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
PCN033]
gi|338769711|gb|EGP24489.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
PCN033]
gi|386157525|gb|EIH13865.1| alkylated DNA repair protein AlkB [Escherichia coli 97.0259]
Length = 216
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPEIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|170746566|ref|YP_001752826.1| 2OG-Fe(II) oxygenase [Methylobacterium radiotolerans JCM 2831]
gi|170653088|gb|ACB22143.1| 2OG-Fe(II) oxygenase [Methylobacterium radiotolerans JCM 2831]
Length = 215
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y R+GLHQDRDE+ + PVVS S+G +A F YG + + L++
Sbjct: 105 CLINLYAPGTRMGLHQDRDEADLAA----PVVSLSLGAAALFRYGGLSRSGPTRSIRLQA 160
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP--GRLNLTFRQ 457
GD L+ GG SR VFHG+ + + A + P GR NLT R+
Sbjct: 161 GDALVMGGASRLVFHGIDRLYADGDLLAAADGPAFLPPGGRCNLTLRR 208
>gi|224823738|ref|ZP_03696847.1| 2OG-Fe(II) oxygenase [Pseudogulbenkiania ferrooxidans 2002]
gi|224604193|gb|EEG10367.1| 2OG-Fe(II) oxygenase [Pseudogulbenkiania ferrooxidans 2002]
Length = 215
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 14/135 (10%)
Query: 323 SMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPV 382
+M ++ L+ D+ E P PD C++N Y RL LHQD+DE + P+
Sbjct: 93 AMPDSFRLLARDAAA---EAGFPGYEPDACLINRYVPGSRLSLHQDKDER----DQIAPI 145
Query: 383 VSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLE 442
VS S+G FL+G R +K +++ L GDV+++GG +R +HGV + P
Sbjct: 146 VSVSLGLPTLFLFGGLRREDKTQRIPLAHGDVVVWGGPARLRYHGVLPLKEGVHP----- 200
Query: 443 NTMLRPGRLNLTFRQ 457
+L R+NLTFR+
Sbjct: 201 --LLGEQRINLTFRK 213
>gi|375261996|ref|YP_005021166.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
KCTC 1686]
gi|365911474|gb|AEX06927.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Klebsiella oxytoca
KCTC 1686]
Length = 216
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 101/226 (44%), Gaps = 35/226 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG ++L+ Y R L+ I + + P F Q G + + M C L W
Sbjct: 15 LAPGAIILRRYARERAPALLQAISEIACRSP--FRQMVTPGGYTMSVAMTNCGELGWT-- 70
Query: 295 TRKYGKKRQVD----GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPD 350
T ++G D G +PS F++L + + + +PD
Sbjct: 71 TNQHGYLYAADDPLTGKRWPQMPSLFRELAAEAAAASG---------------YARFTPD 115
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLE 410
C++N Y +L LHQD+DE +L+ P+VS S+G A F +G R + +VLLE
Sbjct: 116 ACLINRYQPGTKLSLHQDKDEQ--NLRA--PIVSVSLGLPAIFQFGGLRRNDPLRRVLLE 171
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GDV+++GGESR +HG+ + P R NLTFR
Sbjct: 172 HGDVVVWGGESRLFYHGIQPLKEGIHPAT-------GGCRYNLTFR 210
>gi|170767260|ref|ZP_02901713.1| alkylated DNA repair protein AlkB [Escherichia albertii TW07627]
gi|170123594|gb|EDS92525.1| alkylated DNA repair protein AlkB [Escherichia albertii TW07627]
Length = 216
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 33/226 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDWDPQ 294
L PG V+L+ ++ + L+ I + P F Q G + + M C L W
Sbjct: 15 LAPGAVILRRFVFNVAEQLMQGINDVASQSP--FRQMVTPGGYTMSVAMTNCGRLGWTTH 72
Query: 295 TRKY---GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
+ Y + + P+ +P F+ L Q++ + + D PD
Sbjct: 73 RQGYLYSAVDPKTEKPWPA-MPQSFRDLCQQA-----------AMAAGYRD----FQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE+ P+VS S+G A F +G + ++ +++LLE
Sbjct: 117 CLINRYVPGAKLSLHQDKDEADLRA----PIVSVSLGLPAIFQFGGLKRSDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKTGFHP-------LTADCRYNLTFRQ 211
>gi|344924470|ref|ZP_08777931.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Candidatus
Odyssella thessalonicensis L13]
Length = 212
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 104/226 (46%), Gaps = 33/226 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGP-GGFYQPGYNDGAKLRLRMM-CLGLDW-- 291
L PG+ +L+ + EQ L+ + L P + PG G +L + M C L W
Sbjct: 14 LCPGVFILREFAGPVEQQLLCDMETILAAAPLRHMHTPG---GRRLSVAMTNCGQLGWVS 70
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
D Q +Y G IP F +L Q++ ++ +N + +P D
Sbjct: 71 DAQGYRYAAFDPQTGVSWPSIPLSFLELAQQA-----------AQAANFSEFMP----DS 115
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y ++ +HQD+DES S P+VS S+G A F G + KV+L
Sbjct: 116 CLINCYQPGAKMTMHQDKDESDLSA----PIVSVSLGLPATFKMGGGQRTGPVHKVMLSH 171
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++G E+R +HGV + P ++ R+NLTFR+
Sbjct: 172 GDVMVWGNEARLAYHGVLPLKEGVHP-------LVGRRRINLTFRK 210
>gi|422008715|ref|ZP_16355699.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Providencia
rettgeri Dmel1]
gi|414095188|gb|EKT56851.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Providencia
rettgeri Dmel1]
Length = 147
Score = 78.2 bits (191), Expect = 7e-12, Method: Composition-based stats.
Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 13/110 (11%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKV 407
PD C++N Y + LHQD+DE+ ++ P+VSFS+G F +G RDA K +
Sbjct: 47 PDACLINRYAVGAAMALHQDKDETDFTQ----PIVSFSLGLPTTFDFGGVTRDAPKV-AI 101
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+E GDVL++GG+SR +HGV + P +L P R NLTFR
Sbjct: 102 YIEHGDVLVWGGQSRLNYHGVRRVKSGVHP-------LLGPYRYNLTFRH 144
>gi|449307516|ref|YP_007439872.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cronobacter
sakazakii SP291]
gi|449097549|gb|AGE85583.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cronobacter
sakazakii SP291]
Length = 214
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + ++
Sbjct: 112 FTPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAVFQFGGLKRNDPLKR 167
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+LLE GDV+++GG SR +HG+ + P P A E R NLTFRQ
Sbjct: 168 LLLEHGDVVVWGGPSRLFYHGIQPLKPGQHP-ATGEY------RYNLTFRQ 211
>gi|253995510|ref|YP_003047574.1| 2OG-Fe(II) oxygenase [Methylotenera mobilis JLW8]
gi|253982189|gb|ACT47047.1| 2OG-Fe(II) oxygenase [Methylotenera mobilis JLW8]
Length = 214
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGP-GGFYQPGYNDGAKLRLRMM-CLGLDWDPQTR 296
G+ LLK +E L+ + + L P PG G + + M C L W +
Sbjct: 19 GVRLLKALALPQEAALLADVERVLAAAPLRHMVTPG---GFAMSVAMSNCGELGWVTERH 75
Query: 297 KYGKKRQVDGCEP------SVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPD 350
Y + DG +P ++P+ F L Q++ + A P D
Sbjct: 76 GY----RYDGWDPLTQQAWPLMPASFAVLSQQAATLAG---------------YPDFVAD 116
Query: 351 ICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLE 410
C++N Y R+GLHQD++E +S P+VS S+G +A F +G + ++KA L
Sbjct: 117 ACLINRYQVGARMGLHQDKNERDFSQ----PIVSVSLGLTATFQFGGFKRSDKALSFPLY 172
Query: 411 SGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GG +R +HGV + P AL E+ R+NLTFR+
Sbjct: 173 HGDVVVWGGAARLRYHGVLPLKAGMHP-ALGES------RINLTFRK 212
>gi|293607290|ref|ZP_06689631.1| alkylated DNA repair protein AlkB [Achromobacter piechaudii ATCC
43553]
gi|292814382|gb|EFF73522.1| alkylated DNA repair protein AlkB [Achromobacter piechaudii ATCC
43553]
Length = 217
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 77/166 (46%), Gaps = 26/166 (15%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
D +Y + + G +P+ F++L Q + EA +PD
Sbjct: 76 DAHGYRYARIDPLTGQPWPDLPAAFERLAQAAAQEAG---------------FAGFTPDA 120
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C+VN Y RL LHQD++E + P+VS S+G A FL+G + A+KA +V L
Sbjct: 121 CLVNRYEPGARLSLHQDKNERDFDA----PIVSVSLGMPALFLFGGDDRADKAARVPLFH 176
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GG R +HGV + P L R+N T R+
Sbjct: 177 GDVVVWGGVDRLRYHGVLPVKDAPHP-------RLGSQRINFTLRK 215
>gi|440231547|ref|YP_007345340.1| alkylated DNA repair protein [Serratia marcescens FGI94]
gi|440053252|gb|AGB83155.1| alkylated DNA repair protein [Serratia marcescens FGI94]
Length = 215
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 66/111 (59%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y+ +L LHQD+DE + G P+VS S+G A F +G + +++A +
Sbjct: 114 FTPDSCLINRYDPGSKLSLHQDKDERDF----GAPIVSVSLGLPAVFQFGGLQRSDRARR 169
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ L GDV+++GG SR FHG+ + ++++ P R+N+T R+
Sbjct: 170 IPLAHGDVVVWGGPSRLCFHGILPVKEG-------YHSLVGPQRINITLRK 213
>gi|170682238|ref|YP_001744406.1| alkylated DNA repair protein AlkB [Escherichia coli SMS-3-5]
gi|170519956|gb|ACB18134.1| alkylated DNA repair protein AlkB [Escherichia coli SMS-3-5]
Length = 216
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + P PD
Sbjct: 82 DPQTNK----------PWPAMPQSFHHLCQRAATAGG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYVPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LAGDCRYNLTFRQ 211
>gi|78066391|ref|YP_369160.1| DNA-N1-methyladenine dioxygenase [Burkholderia sp. 383]
gi|77967136|gb|ABB08516.1| DNA-N1-methyladenine dioxygenase [Burkholderia sp. 383]
Length = 216
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C++N + RL LHQD+DE + P+VS S+G +A FL+G +
Sbjct: 112 FPDFEPDACLINRHLPGARLSLHQDKDERDLNA----PIVSVSLGMTAIFLFGGHARGDS 167
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
AE+VLL GDV+++GG R +HG+ + P +L R+NLTFR+
Sbjct: 168 AERVLLRHGDVVVWGGVDRMRYHGILPLKDVPHP-------LLGSQRINLTFRK 214
>gi|422321269|ref|ZP_16402318.1| 2OG-Fe(II) oxygenase [Achromobacter xylosoxidans C54]
gi|317403872|gb|EFV84345.1| 2OG-Fe(II) oxygenase [Achromobacter xylosoxidans C54]
Length = 219
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P +PD C+VN Y RL LHQD+DE Y G P+VS S+G A FL+G ++
Sbjct: 115 FPGFAPDACLVNRYQPGSRLSLHQDKDERDY----GAPIVSVSLGMPAVFLFGGHARGDR 170
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
A V L GDV+++GG R +HGV + P L R+N T RQ
Sbjct: 171 AVHVPLFHGDVVVWGGVDRLRYHGVLPLKDRPHP-------TLGSVRINFTIRQ 217
>gi|398980214|ref|ZP_10688882.1| hypothetical protein PMI24_05071 [Pseudomonas sp. GM25]
gi|398134753|gb|EJM23890.1| hypothetical protein PMI24_05071 [Pseudomonas sp. GM25]
Length = 459
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 81/173 (46%), Gaps = 28/173 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D +Y + V +P F++L Q + +K + D
Sbjct: 310 CGALGWITDRSGYRYSSEDPVSHRPWPAMPEVFRELAQTA-----------AKRAGFADF 358
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
+P D C++N Y ++ LHQD+DE+ Y P+VS S+G A FL+G ++
Sbjct: 359 VP----DSCLINRYVPGAKMSLHQDKDENAYEA----PIVSLSLGLPATFLFGGFARGDR 410
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
++K+ L GD++++GG R +HG+ I P P L R NLTFR
Sbjct: 411 SQKISLLHGDMVVWGGVDRLRYHGILPIKPGRHP-------RLGEQRFNLTFR 456
>gi|429094928|ref|ZP_19157437.1| Alkylated DNA repair protein AlkB [Cronobacter dublinensis 1210]
gi|426739955|emb|CCJ83550.1| Alkylated DNA repair protein AlkB [Cronobacter dublinensis 1210]
Length = 214
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G + +
Sbjct: 110 PDFIPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAVFQFGGLKRNDPL 165
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++LLE GDV+++GG SR +HG+ + P P A E R NLTFRQ
Sbjct: 166 KRLLLEHGDVVVWGGPSRLFYHGIQPLKPGQHP-ATGEY------RYNLTFRQ 211
>gi|121593077|ref|YP_984973.1| DNA-N1-methyladenine dioxygenase [Acidovorax sp. JS42]
gi|120605157|gb|ABM40897.1| DNA-N1-methyladenine dioxygenase [Acidovorax sp. JS42]
Length = 220
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D + +Y + G +P++F QL AHA + + V
Sbjct: 71 CGPLSWVSDRRGYRYAALDPLTGKPWPALPADFAQL-------AHAAAQEAGFAAFV--- 120
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
PD C++N Y RL LHQDRDE + P+VS S+G A FL+G +
Sbjct: 121 -----PDACLINRYAPGTRLSLHQDRDEQDLAA----PIVSISLGLPATFLWGGATRGER 171
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
A +V L GD +++GG R FHGV + P P A E R+NLT R+
Sbjct: 172 ALRVPLRHGDAVVWGGVDRLRFHGVLPVAPGQHP-ATGEC------RINLTLRK 218
>gi|358448396|ref|ZP_09158900.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Marinobacter
manganoxydans MnI7-9]
gi|357227493|gb|EHJ05954.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Marinobacter
manganoxydans MnI7-9]
Length = 216
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--DPQT 295
G V+L+ + + L+ I + P F G + M C G L W D +
Sbjct: 21 GAVVLRQFALPNAESLMAGIETVTSEAP--FRHMKTPGGHAMSAAMSCCGDLGWVTDSRG 78
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y + G +P+ F++L RS +E PD C++N
Sbjct: 79 YRYQAEDPESGRPWPAMPAAFRELA-RSAAETAGF--------------EGFEPDACLIN 123
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVL 415
Y R+GLHQD+DE ++ P+VS S+G F +G + + + +V L GDV+
Sbjct: 124 RYQPGARMGLHQDKDEQDFTQ----PIVSVSLGLPMVFQFGGLKRSERPIRVPLAHGDVV 179
Query: 416 IFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++GG +R +HGV ++ E+ + R NLTFR+
Sbjct: 180 VWGGPARMCYHGVLTLKAG-------EHPLTGGYRYNLTFRR 214
>gi|375002082|ref|ZP_09726422.1| putative alkylated DNA repair protein AlkB [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|353076770|gb|EHB42530.1| putative alkylated DNA repair protein AlkB [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
Length = 216
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 100/226 (44%), Gaps = 33/226 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG V+L+ + Q L+ I + P F Q G + + M C L W D
Sbjct: 15 LAPGAVVLRRFAFRAAQSLLDDIGFVASQSP--FRQMVTPGGYTMSVAMTNCGALGWTTD 72
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLV-QRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
Y + + +P F + Q +++ +A + PD
Sbjct: 73 RHGYCYAVRDPLTDKPWPALPLSFASVCRQAAIAAGYA----------------SFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +++ LE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPLQRISLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 173 GDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|218548327|ref|YP_002382118.1| oxidative demethylase [Escherichia fergusonii ATCC 35469]
gi|218355868|emb|CAQ88483.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Escherichia fergusonii ATCC 35469]
Length = 216
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P PD C++N Y +L LHQD+DE P+VS S+G A F +G + +
Sbjct: 110 PDFQPDACLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPL 165
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++LLE GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 166 KRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHP-------LTADCRYNLTFRQ 211
>gi|222109847|ref|YP_002552111.1| 2og-fe(ii) oxygenase [Acidovorax ebreus TPSY]
gi|221729291|gb|ACM32111.1| 2OG-Fe(II) oxygenase [Acidovorax ebreus TPSY]
Length = 220
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D + +Y + G +P++F QL AHA + + V
Sbjct: 71 CGPLSWVSDRRGYRYAALDPLTGKPWPALPADFAQL-------AHAAAQEAGFAAFV--- 120
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
PD C++N Y RL LHQDRDE + P+VS S+G A FL+G +
Sbjct: 121 -----PDACLINRYAPGTRLSLHQDRDEQDLAA----PIVSISLGLPATFLWGGATRGER 171
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
A +V L GD +++GG R FHGV + P P A E R+NLT R+
Sbjct: 172 ALRVPLRHGDTVVWGGVDRLRFHGVLPVAPGQHP-ATGEC------RINLTLRK 218
>gi|304397516|ref|ZP_07379394.1| 2OG-Fe(II) oxygenase [Pantoea sp. aB]
gi|440760431|ref|ZP_20939543.1| Alkylated DNA repair protein AlkB [Pantoea agglomerans 299R]
gi|304355134|gb|EFM19503.1| 2OG-Fe(II) oxygenase [Pantoea sp. aB]
gi|436425804|gb|ELP23529.1| Alkylated DNA repair protein AlkB [Pantoea agglomerans 299R]
Length = 213
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P +PD C++N Y +L LHQD+DE L + P+VS S+G A F +G +
Sbjct: 109 FPGFNPDACLLNRYEPGAKLTLHQDKDEK--DLHQ--PIVSVSLGLPAVFQFGGFERGDS 164
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++VLLE GD++++GG SR +HG+ + P P + R NLTFR+
Sbjct: 165 TQRVLLEHGDIVVWGGPSRLRYHGILPLKPGVHP-------LAGAWRYNLTFRR 211
>gi|420336881|ref|ZP_14838453.1| alkylated DNA repair protein AlkB [Shigella flexneri K-315]
gi|391261384|gb|EIQ20432.1| alkylated DNA repair protein AlkB [Shigella flexneri K-315]
Length = 216
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GD +++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDEVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|374364693|ref|ZP_09622794.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cupriavidus
basilensis OR16]
gi|373103825|gb|EHP44845.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Cupriavidus
basilensis OR16]
Length = 217
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD C++N Y RL LHQDRDE L P+VS S+G A FL+G + A + ++
Sbjct: 116 FKPDACLLNRYAPGTRLSLHQDRDE----LDLRAPIVSVSLGLPAVFLFGGLKRAERVQR 171
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V L GDV+++GG +R FHG+ AP A ++ ++ R+NLT R+
Sbjct: 172 VRLAHGDVVVWGGPARLAFHGI-------APLADGDHALVGRERINLTLRK 215
>gi|262194984|ref|YP_003266193.1| 2OG-Fe(II) oxygenase [Haliangium ochraceum DSM 14365]
gi|262078331|gb|ACY14300.1| 2OG-Fe(II) oxygenase [Haliangium ochraceum DSM 14365]
Length = 219
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 10/109 (9%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VN Y T RLG+H D+DE PVVS S+G A + G ++++L
Sbjct: 113 PEACLVNLYQTGSRLGMHVDQDER----AADAPVVSISLGCDAVYRLGGHTRNLPSQRLL 168
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L SGDV++ GG +R +HGV I ++P LE R+NLT R+
Sbjct: 169 LRSGDVVVLGGAARRCYHGVDRIVAGTSPLPELE------ARINLTLRR 211
>gi|304320809|ref|YP_003854452.1| alkylated DNA repair protein [Parvularcula bermudensis HTCC2503]
gi|303299711|gb|ADM09310.1| alkylated DNA repair protein [Parvularcula bermudensis HTCC2503]
Length = 222
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 104/242 (42%), Gaps = 46/242 (19%)
Query: 222 NECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLR 281
R+ VD PG + K +++ + + +CQ+ + P G +
Sbjct: 6 QPVREVVDLGEGACHLPGYLPAKAASDLQQHL--IHLCQDR------WIVPVTPGGQTMS 57
Query: 282 LRMMCLG-LDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVS 338
R M LG L W D + +Y + VDG +P ALI++
Sbjct: 58 ARQMNLGPLGWVTDRRGYRYEPRHPVDGAAWPEMPP--------------ALIRI----- 98
Query: 339 NVEDILP-ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD 397
D+LP A SP+ +VN Y + ++GLH+D DE+ K +P++S S G F G
Sbjct: 99 -WNDLLPEAPSPEAGLVNLYGPTAKMGLHRDADEA----AKDVPILSVSFGAPGRFRLGG 153
Query: 398 ERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLR--PGRLNLTF 455
++L GDVLI G SRH +HG+ I LL + + P RL+LT
Sbjct: 154 ATRKGSTRSIVLGHGDVLILAGPSRHFYHGIDRI--------LLPSPLFAEDPHRLSLTL 205
Query: 456 RQ 457
R+
Sbjct: 206 RR 207
>gi|340029601|ref|ZP_08665664.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Paracoccus sp. TRP]
Length = 210
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 28/174 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D + +Y + + G +P + L + + +EA
Sbjct: 61 CGALGWISDRRGYRYEPEDPLTGKPWPPMPPSLQNLAETAAAEAG--------------- 105
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C++N Y ++GLHQDRDE+ + P+VS S+G A F +G +
Sbjct: 106 FPDFHPDACLINRYVPGIKMGLHQDRDEADLTA----PIVSVSLGLPAIFQFGGPERRDP 161
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ L GDV+++GG +R +HG+ ++ P S P + R+NLTFR+
Sbjct: 162 VARHTLHHGDVVVWGGVARLNWHGILTLRPGSHP-------LTGAARINLTFRR 208
>gi|326318676|ref|YP_004236348.1| 2OG-Fe(II) oxygenase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323375512|gb|ADX47781.1| 2OG-Fe(II) oxygenase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 222
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 77/174 (44%), Gaps = 28/174 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D + +Y G +P F++L + + A
Sbjct: 73 CGRLGWVSDRRGYRYAPLDPGSGTAWPAMPDTFRRLAREAAEYAG--------------- 117
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C+VN Y RL LHQDRDE + L+ P+VS S+G A FL+G
Sbjct: 118 FPDFEPDSCLVNRYAPGARLSLHQDRDE--HDLQA--PIVSVSLGLPAVFLWGGFARTGP 173
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+V L+ GDV+++GG R FHGV + P E R+NLTFR+
Sbjct: 174 VARVPLQHGDVVVWGGPDRLRFHGVQPVKDGLHPEWGAE-------RVNLTFRK 220
>gi|297197713|ref|ZP_06915110.1| alkylated DNA repair protein [Streptomyces sviceus ATCC 29083]
gi|297146837|gb|EFH28370.1| alkylated DNA repair protein [Streptomyces sviceus ATCC 29083]
Length = 99
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 11/105 (10%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA-EKVLLES 411
++NFY+ R+G+H+D DE K PVVS S+GD+ F +G+ K V L S
Sbjct: 1 MINFYDQDARMGMHRDSDE-----KSDAPVVSLSLGDTCVFRFGNPETRTKPYTDVELRS 55
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GD+ +FGG SR +HGV ++P +AP L GRLN+T R
Sbjct: 56 GDLFVFGGPSRLAYHGVPRVHPGTAPPELGLT-----GRLNITLR 95
>gi|429116295|ref|ZP_19177213.1| Alkylated DNA repair protein AlkB [Cronobacter sakazakii 701]
gi|426319424|emb|CCK03326.1| Alkylated DNA repair protein AlkB [Cronobacter sakazakii 701]
Length = 123
Score = 77.4 bits (189), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y +L LHQD+DE P+VS S+G A F +G + + ++
Sbjct: 21 FTPDACLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAVFQFGGLKRNDPLKR 76
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+LLE GDV+++GG SR +HG+ + P P R NLTFRQ
Sbjct: 77 LLLEHGDVVVWGGPSRLFYHGIQPLKPGQHPAT-------GEYRYNLTFRQ 120
>gi|212711803|ref|ZP_03319931.1| hypothetical protein PROVALCAL_02878 [Providencia alcalifaciens DSM
30120]
gi|212685325|gb|EEB44853.1| hypothetical protein PROVALCAL_02878 [Providencia alcalifaciens DSM
30120]
Length = 213
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 320 VQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKG 379
Q++ + AL K S + + +PD C++N Y ++ LHQD+DE+ +S
Sbjct: 82 TQQAWPQMPALFKQLSINAAEKAGFVGFAPDACLINRYGVGAKMSLHQDKDEADFSQ--- 138
Query: 380 LPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGA 439
P+VSFS+G A F +G + + + LE GDV ++GG SR +HGV I P
Sbjct: 139 -PIVSFSLGLPAIFDFGGSTREHPRKSIELEHGDVFVWGGRSRLNYHGVRHIKSGVHP-- 195
Query: 440 LLENTMLRPGRLNLTFRQ 457
R NLTFR+
Sbjct: 196 -----QFGAYRFNLTFRR 208
>gi|159477217|ref|XP_001696707.1| hypothetical protein CHLREDRAFT_175411 [Chlamydomonas reinhardtii]
gi|158275036|gb|EDP00815.1| predicted protein [Chlamydomonas reinhardtii]
Length = 218
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 244 KHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQ 303
+ +L++ EQI IV+ +ELG GPGGFY P Y+ G +L+LRMMCLGL W+P+T KY R+
Sbjct: 142 QGFLSMSEQIKIVQAVRELGLGPGGFYPPSYSGGGRLQLRMMCLGLHWEPRTSKYEATRR 201
Query: 304 VDGC---EPSVIP 313
G +P+ +P
Sbjct: 202 PAGVWWPQPNDLP 214
>gi|365971401|ref|YP_004952962.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
cloacae EcWSU1]
gi|365750314|gb|AEW74541.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter
cloacae EcWSU1]
Length = 216
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 15/111 (13%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R + ++++
Sbjct: 114 PDACLINRYAVGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAVFQFGGLRRNDPLKRLM 169
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLTFRQ 457
LE GDV+++G ESR +HG+ + P P G RLNLTFRQ
Sbjct: 170 LEHGDVVVWGRESRLFYHGIQPLKPGVHPQTGEF---------RLNLTFRQ 211
>gi|455644465|gb|EMF23565.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citrobacter
freundii GTC 09479]
Length = 216
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 96/225 (42%), Gaps = 31/225 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L G V+L+ + L+ I + P F Q G + + M C L W D
Sbjct: 15 LASGAVILRRFAFDSAPTLLQAIAAVARQSP--FRQMVTPGGYTMSVAMTNCGHLGWTTD 72
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y + G +P F L Q++ + A D PD C
Sbjct: 73 QHGYLYSPCDPLTGVHWPPLPDAFADLCQQAATAA-----------GYAD----FQPDAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y +L LHQD+DE L+ P+VS S+G A F +G R + +++LLE G
Sbjct: 118 LINRYTPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLRRNDPLKRLLLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
DV+++GG SR +HG+ + P + R NLTFRQ
Sbjct: 174 DVVVWGGNSRLFYHGIQPLKTGYHP-------LTGDCRYNLTFRQ 211
>gi|395230504|ref|ZP_10408808.1| DNA repair system specific for alkylated DNA [Citrobacter sp. A1]
gi|421846049|ref|ZP_16279200.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|424731435|ref|ZP_18160019.1| dna repair system specific for alkylated dna [Citrobacter sp. L17]
gi|394715889|gb|EJF21674.1| DNA repair system specific for alkylated DNA [Citrobacter sp. A1]
gi|411772818|gb|EKS56413.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|422894086|gb|EKU33901.1| dna repair system specific for alkylated dna [Citrobacter sp. L17]
Length = 216
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 96/225 (42%), Gaps = 31/225 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L G V+L+ + L+ I + P F Q G + + M C L W D
Sbjct: 15 LASGAVILRRFAFDSAPTLLQAIAAVARQSP--FRQMVTPGGYTMSVAMTNCGHLGWTTD 72
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y + G +P F L Q++ + A D PD C
Sbjct: 73 QHGYLYSPFDPLTGVHWPPLPDAFADLCQQAATAA-----------GYAD----FQPDAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y +L LHQD+DE L+ P+VS S+G A F +G R + +++LLE G
Sbjct: 118 LINRYTPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLRRNDPLKRLLLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
DV+++GG SR +HG+ + P + R NLTFRQ
Sbjct: 174 DVVVWGGNSRLFYHGIQPLKTGYHP-------LTGDCRYNLTFRQ 211
>gi|419154615|ref|ZP_13699178.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6C]
gi|377997197|gb|EHV60304.1| alkylated DNA repair protein AlkB [Escherichia coli DEC6C]
Length = 216
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++ GESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWDGESRLFYHGIQPLKAGFHP-------LTIDCRYNLTFRQ 211
>gi|237732263|ref|ZP_04562744.1| DNA repair system specific for alkylated DNA [Citrobacter sp. 30_2]
gi|226907802|gb|EEH93720.1| DNA repair system specific for alkylated DNA [Citrobacter sp. 30_2]
Length = 216
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 96/225 (42%), Gaps = 31/225 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L G V+L+ + L+ I + P F Q G + + M C L W D
Sbjct: 15 LASGAVILRRFAFDSAPTLLQAIAAVARQSP--FRQMVTPGGYTMSVAMTNCGHLGWTTD 72
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y + G +P F L Q++ + A D PD C
Sbjct: 73 QHGYLYSPFDPLTGTHWPPLPDAFADLCQQAATAA-----------GYAD----FQPDAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y +L LHQD+DE L+ P+VS S+G A F +G R + +++LLE G
Sbjct: 118 LINRYTPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLRRNDPLKRLLLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
DV+++GG SR +HG+ + P + R NLTFRQ
Sbjct: 174 DVVVWGGNSRLFYHGIQPLKTGYHP-------LTGDCRYNLTFRQ 211
>gi|283807198|pdb|3KHC|A Chain A, Crystal Structure Of Escherichia Coli Alkb In Complex With
Ssdna Containing A 1-Methylguanine Lesion
gi|283807199|pdb|3KHC|B Chain B, Crystal Structure Of Escherichia Coli Alkb In Complex With
Ssdna Containing A 1-Methylguanine Lesion
Length = 219
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 85 DPQTNKPW----------PAMPQSFHNLCQRAATAAG---------------YPDFQPDA 119
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+ E P+VS S+G A F +G + + +++LLE
Sbjct: 120 CLINRYAPGAKLSLHQDKAEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 175
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 176 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTIDCRYNLTFRQ 214
>gi|157144834|ref|YP_001452153.1| hypothetical protein CKO_00562 [Citrobacter koseri ATCC BAA-895]
gi|157082039|gb|ABV11717.1| hypothetical protein CKO_00562 [Citrobacter koseri ATCC BAA-895]
Length = 217
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R + ++
Sbjct: 113 FQPDACLINRYAPGSKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLRRNDPLKR 168
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+LLE GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 169 LLLEHGDVVVWGGESRLFYHGIQPLKAGFHP-------LTADCRYNLTFRQ 212
>gi|423013768|ref|ZP_17004489.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Achromobacter
xylosoxidans AXX-A]
gi|338783262|gb|EGP47630.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Achromobacter
xylosoxidans AXX-A]
Length = 219
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P +PD C+VN Y RL LHQD+DE YS P+VS S+G A FL+G +K
Sbjct: 115 FPGFAPDACLVNRYQPGSRLSLHQDKDERDYSA----PIVSVSLGMPAVFLFGGHERGDK 170
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
A V L GDV+++GG R +HGV + P L R+N T R+
Sbjct: 171 AVHVPLFHGDVVVWGGVDRLRYHGVLPLRDRPHP-------TLGSVRINFTIRK 217
>gi|293410575|ref|ZP_06654151.1| conserved hypothetical protein [Escherichia coli B354]
gi|291471043|gb|EFF13527.1| conserved hypothetical protein [Escherichia coli B354]
Length = 216
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P D
Sbjct: 82 DPQTNKPW----------PAMPQSFHDLCQRAATAAG---------------YPDFQSDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTTDCRYNLTFRQ 211
>gi|375290021|ref|YP_005124561.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
241]
gi|376244855|ref|YP_005135094.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
HC01]
gi|371579692|gb|AEX43359.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
241]
gi|372107485|gb|AEX73546.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
HC01]
Length = 232
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 24/228 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIV----RICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDW 291
+ PG+ L +L + +Q +V I + P +P G ++ + + LG W
Sbjct: 13 IAPGVAHLPGWLGVDKQAELVCEIREIARTYADTPMAMLRPTLKSGGQMSVYQLHLGRYW 72
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
+ +Y K + G +P L ++ A + VE +P ++
Sbjct: 73 HYPSYRYIDK--IAGTTVPPVPDGLAALAPEALRAAAE--VAEELAPWVETFVP----EM 124
Query: 352 CIVNFYNTSGRLGLHQDR-DESRYSLKKGLPVVSFSVGDSAEFLYG-DERDANKAEKVLL 409
+VN+Y R+G+H D +ESR PV+S S+GD A F G E + V L
Sbjct: 125 VLVNYYPPGSRMGMHVDEFEESR------APVISVSIGDEALFRMGHTESRTQPWDDVTL 178
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGD+++FGG R +HGV +N + P + L GR+N+T RQ
Sbjct: 179 CSGDLVVFGGPKRFAYHGVVRVNDATFP----DGCGLEQGRINITIRQ 222
>gi|85712827|ref|ZP_01043870.1| Alkylated DNA repair protein [Idiomarina baltica OS145]
gi|85693378|gb|EAQ31333.1| Alkylated DNA repair protein [Idiomarina baltica OS145]
Length = 209
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P P+ C++N Y ++GLHQDRDES + PVVS+S G A F++ +
Sbjct: 107 PEFLPNACLINVYKPGAKMGLHQDRDESDLNE----PVVSYSFGLPARFIWAGQTRTGTK 162
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++ L GDVL++GG SR +HG+ + + P L + T R+NLT R+
Sbjct: 163 QRLPLNHGDVLVWGGPSRLNYHGIDKLVEGTHP--LTQQT-----RVNLTLRK 208
>gi|110642422|ref|YP_670152.1| alkylated DNA repair protein AlkB [Escherichia coli 536]
gi|191170099|ref|ZP_03031653.1| alkylated DNA repair protein AlkB [Escherichia coli F11]
gi|300981312|ref|ZP_07175456.1| alkylated DNA repair protein AlkB [Escherichia coli MS 200-1]
gi|422374662|ref|ZP_16454937.1| alkylated DNA repair protein AlkB [Escherichia coli MS 60-1]
gi|432471580|ref|ZP_19713626.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE206]
gi|432713992|ref|ZP_19949032.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE8]
gi|433078390|ref|ZP_20264928.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE131]
gi|110344014|gb|ABG70251.1| alkylated DNA repair protein AlkB [Escherichia coli 536]
gi|190909615|gb|EDV69200.1| alkylated DNA repair protein AlkB [Escherichia coli F11]
gi|300307601|gb|EFJ62121.1| alkylated DNA repair protein AlkB [Escherichia coli MS 200-1]
gi|324014015|gb|EGB83234.1| alkylated DNA repair protein AlkB [Escherichia coli MS 60-1]
gi|430997969|gb|ELD14218.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE206]
gi|431256769|gb|ELF49704.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE8]
gi|431596620|gb|ELI66572.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Escherichia coli
KTE131]
Length = 216
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPW----------PAMPQSFHHLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N +L LHQD+DE P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRCVPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKVGVHP-------LTTDCRYNLTFRQ 211
>gi|414173186|ref|ZP_11427949.1| alkylated DNA repair protein AlkB [Afipia broomeae ATCC 49717]
gi|410891838|gb|EKS39634.1| alkylated DNA repair protein AlkB [Afipia broomeae ATCC 49717]
Length = 215
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y +L LHQD+DE L P+VS S+G A FL+G ++K +
Sbjct: 116 PDACLINRYEPGAKLSLHQDKDE----LDFNAPIVSVSLGLPATFLFGGLNRSDKTVRYR 171
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+ +GG +R +HGV P A E+ +L P R+NLTFR+
Sbjct: 172 LIHGDVVAWGGPARLAYHGV-------MPLAEGEHPLLGPQRINLTFRK 213
>gi|339022224|ref|ZP_08646184.1| DNA repair protein for alkylated DNA [Acetobacter tropicalis NBRC
101654]
gi|338750771|dbj|GAA09488.1| DNA repair protein for alkylated DNA [Acetobacter tropicalis NBRC
101654]
Length = 216
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 31/224 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG +LL+ + + E ++ ++ K F G K+ + M C L W D
Sbjct: 15 LSPGAMLLRGF-ALPEASELISTLHDIAKN-APFRTMMTPGGGKMSVGMTNCGALGWVTD 72
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
+Y ++ +P +++L RS A P+ C
Sbjct: 73 RNGYRYTPTDPLNNQVWPPLPPAWQKLATRSAEAAG---------------FKGFHPNAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y R+ LHQD+DE +S P+VS S+G FL+G + + +LLE G
Sbjct: 118 LINRYEPGTRMALHQDKDEGDFSQ----PIVSVSLGLPISFLWGGLKRSTSPHAILLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
DVL++GG++R +HGV + P + R NLTFR
Sbjct: 174 DVLVWGGKARLHYHGVKPLADGLHP-------VTGRVRFNLTFR 210
>gi|161502579|ref|YP_001569691.1| hypothetical protein SARI_00625 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160863926|gb|ABX20549.1| hypothetical protein SARI_00625 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 216
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G ++ ++
Sbjct: 112 FQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLHRSDPLQR 167
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+LLE GD++++G ESR +HG+ ++ P M R NLTFRQ
Sbjct: 168 ILLEHGDIVVWGSESRLFYHGIQTLKAGFHP-------MTGEFRYNLTFRQ 211
>gi|417467414|ref|ZP_12165138.1| Methylated-DNA-protein-cysteine methyltransferase, partial
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
gi|353629678|gb|EHC77430.1| Methylated-DNA-protein-cysteine methyltransferase, partial
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
Length = 102
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 11/108 (10%)
Query: 350 DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLL 409
D C++N Y +L LHQD+DE P+VS S+G A F +G R ++ +++LL
Sbjct: 1 DACLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGVPAIFQFGGLRRSDPLQRILL 56
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
E GD++++GGESR +HG+ + P M R NLTFRQ
Sbjct: 57 EHGDIVVWGGESRLFYHGIQPLKAGFHP-------MTGEFRYNLTFRQ 97
>gi|185177845|pdb|3BKZ|A Chain A, X-Ray Structure Of E Coli Alkb Crosslinked To Dsdna In The
Active Site
Length = 201
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 76/166 (45%), Gaps = 36/166 (21%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 69 DPQTNK----------PWPAMPQSFHNLCQRAATAAG---------------YPDFQPDA 103
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+ E L+ P+VS S+G A F +G + + +++LLE
Sbjct: 104 CLINRYAPGAKLSLHQDKCEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 159
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GGESR +HG+ + P + R NLTFRQ
Sbjct: 160 GDVVVWGGESRLFYHGIQPLKAGFHP-------LTIDCRYNLTFRQ 198
>gi|424923432|ref|ZP_18346793.1| Alkylated DNA repair protein [Pseudomonas fluorescens R124]
gi|404304592|gb|EJZ58554.1| Alkylated DNA repair protein [Pseudomonas fluorescens R124]
Length = 221
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 11/107 (10%)
Query: 350 DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLL 409
D C++N Y ++ LHQD+DE+ Y+ P+VS S+G A FL+G ++K++++ L
Sbjct: 123 DSCLINQYVPGAKMSLHQDKDENAYAA----PIVSLSLGLPAMFLFGGFARSDKSQRIPL 178
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GD++I+GG R FHGV I P P L R+NLTFR
Sbjct: 179 LHGDMVIWGGVDRLRFHGVLPIKPGQHP-------RLGERRINLTFR 218
>gi|187479591|ref|YP_787616.1| alkylated DNA repair protein [Bordetella avium 197N]
gi|115424178|emb|CAJ50731.1| alkylated DNA repair protein [Bordetella avium 197N]
Length = 213
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y R+ LHQDR+E + P+VS S+G A FL+G R ++ +++
Sbjct: 114 PDACLINHYAPGARMSLHQDRNERDFEA----PIVSVSLGLPAVFLFGGMRREDRPGRIV 169
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV ++GG R FHGV P A E+ +L R+NLT RQ
Sbjct: 170 LHHGDVAVWGGVDRLRFHGV-------LPLADGEHPLLGRQRINLTLRQ 211
>gi|422018113|ref|ZP_16364670.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Providencia
alcalifaciens Dmel2]
gi|414104405|gb|EKT65970.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Providencia
alcalifaciens Dmel2]
Length = 213
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 320 VQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKG 379
Q++ AL K S + + SPD C++N Y ++ LHQD+DE+ +S
Sbjct: 82 TQQAWPLMPALFKQLSINAAEKAGFGGFSPDACLINRYGVGAKMSLHQDKDEADFSQ--- 138
Query: 380 LPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGA 439
P+VSFS+G A F +G + + + LE GDV ++GG SR +HGV I P
Sbjct: 139 -PIVSFSLGLPAIFDFGGSTREHPRKSIELEHGDVFVWGGRSRLNYHGVRHIKSGVHP-- 195
Query: 440 LLENTMLRPGRLNLTFRQ 457
R NLTFR+
Sbjct: 196 -----QFGAYRFNLTFRR 208
>gi|395235315|ref|ZP_10413530.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter sp.
Ag1]
gi|394730211|gb|EJF30103.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Enterobacter sp.
Ag1]
Length = 213
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 28/174 (16%)
Query: 286 CLGLDWDPQTRKYGKKRQ--VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W Y Q + G +IP F + R+ S+ + D
Sbjct: 64 CGALGWSTNQNGYLYSPQDPLTGQGWPLIPEVFLSICHRA-----------SRAAGYLD- 111
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
PD C++N Y +L LHQD+DE +L++ P+VS S+G A F +G + +
Sbjct: 112 ---FEPDACLINRYAAGTKLSLHQDKDEP--NLRQ--PIVSVSLGLPAIFQFGGLQRGDP 164
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++++LE GDV+++GG SR +HG+ + P P L + R NLTFR+
Sbjct: 165 LQRIMLEHGDVVVWGGASRLFYHGILPLKPGFHP---LTDQF----RYNLTFRR 211
>gi|448242965|ref|YP_007407018.1| alkylated DNA repair protein [Serratia marcescens WW4]
gi|445213329|gb|AGE18999.1| alkylated DNA repair protein [Serratia marcescens WW4]
gi|453062043|gb|EMF03037.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Serratia marcescens
VGH107]
Length = 215
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 64/109 (58%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y+ +L LHQD+DE + G P+VS S+G A F +G + ++A ++
Sbjct: 116 PDSCLMNRYDPGSKLSLHQDKDEHDF----GAPIVSVSLGLPAVFQFGGLQRGDRARRIP 171
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG SR FHG+ + ++++ P R+N+T R+
Sbjct: 172 LAHGDVVVWGGPSRLCFHGILPVKEG-------YHSLVGPHRINITLRK 213
>gi|320108057|ref|YP_004183647.1| 2OG-Fe(II) oxygenase [Terriglobus saanensis SP1PR4]
gi|319926578|gb|ADV83653.1| 2OG-Fe(II) oxygenase [Terriglobus saanensis SP1PR4]
Length = 217
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 15/115 (13%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C++N Y RL LHQD++E ++ P+VS S+G A FL+G +K
Sbjct: 113 FPNFVPDACLINRYEPGARLSLHQDKNERDFTQ----PIVSVSLGLPATFLFGGLERGDK 168
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRL--NLTFR 456
+++ + GDVL++GG +R +HG++ + P R GR+ NLTFR
Sbjct: 169 TQRIQVIHGDVLVWGGSARLCYHGIAPLKEGEYP---------RLGRVRYNLTFR 214
>gi|429084549|ref|ZP_19147552.1| Alkylated DNA repair protein AlkB [Cronobacter condimenti 1330]
gi|426546439|emb|CCJ73593.1| Alkylated DNA repair protein AlkB [Cronobacter condimenti 1330]
Length = 214
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P +PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G + +
Sbjct: 110 PDFTPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAVFQFGGLKRNDPL 165
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++LLE GDV+++GG SR +HG+ + P A E R NLTFRQ
Sbjct: 166 KRLLLEHGDVVVWGGASRLFYHGIQPLKGGEHP-ATGEY------RFNLTFRQ 211
>gi|238793617|ref|ZP_04637240.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Yersinia intermedia
ATCC 29909]
gi|238727032|gb|EEQ18563.1| Alpha-ketoglutarate-dependent dioxygenase alkB [Yersinia intermedia
ATCC 29909]
Length = 216
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 37/228 (16%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPG-GFYQPGYNDGAKLRLRMM-CLGLDW-- 291
L PG V+L HY + +L + P PG G ++ + M C + W
Sbjct: 18 LAPGAVVLHHYARQQAALLFADVIAITTAAPFRHLITPG---GYRMSVAMSNCGQVGWVS 74
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
D Q +Y + IP+ L + +A S E PD
Sbjct: 75 DKQGYRYSSIDPLTEKSWPAIPARLMTLAVDAAQQA--------GFSQFE-------PDA 119
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L P+VS S+G +A F +G K +VLL
Sbjct: 120 CLINRYEAGAKLSLHQDKDE----LDLRQPIVSVSLGLAAVFQFGGLAREAKCLRVLLTE 175
Query: 412 GDVLIFGGESRHVFHGVSSINP--NSAPGALLENTMLRPGRLNLTFRQ 457
GDV+++GG SR +HGV + ++ GA R+NLTFR+
Sbjct: 176 GDVVVWGGPSRLNYHGVLPLKAGFSATTGAY---------RINLTFRR 214
>gi|357975693|ref|ZP_09139664.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Sphingomonas sp.
KC8]
Length = 225
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y RL LHQDRDE S P+VS S+G A FL+G ++ +V
Sbjct: 126 PDACLINRYEPGARLSLHQDRDERDQSA----PIVSVSLGLPATFLWGGPERRDRPRRVR 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG +R FHG+ + + P + R NLTFR+
Sbjct: 182 LAHGDVVVWGGPARFAFHGIDPVADGTHP-------LTGAARYNLTFRK 223
>gi|365850427|ref|ZP_09390891.1| putative alkylated DNA repair protein AlkB [Yokenella regensburgei
ATCC 43003]
gi|364567434|gb|EHM45102.1| putative alkylated DNA repair protein AlkB [Yokenella regensburgei
ATCC 43003]
Length = 216
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P PD C++N Y + +L LHQD+DE+ P+VS S+G A F +G R +
Sbjct: 110 PDFRPDACLINRYAPATKLSLHQDKDEATLLA----PIVSVSLGLPAIFQFGGLRRNDPL 165
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
++VLLE GDV+++GG SR +HG+ + P L + R NLTFR
Sbjct: 166 KRVLLEHGDVVVWGGASRLFYHGIQPLKEGHHP---LTDAF----RYNLTFR 210
>gi|283832342|ref|ZP_06352083.1| alkylated DNA repair protein AlkB [Citrobacter youngae ATCC 29220]
gi|291071990|gb|EFE10099.1| alkylated DNA repair protein AlkB [Citrobacter youngae ATCC 29220]
Length = 216
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 96/225 (42%), Gaps = 31/225 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L G V+L+ + L+ I + P F Q G + + M C L W D
Sbjct: 15 LASGAVILRRFAFESAPSLLQAIAAVARQSP--FRQMVTPGGYTMSVAMTNCGHLGWTTD 72
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y + G +P F L Q++ + A D PD C
Sbjct: 73 QHGYLYSPFDPLSGAPWPPMPDAFADLCQQAATAA-----------GYAD----FQPDAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y +L LHQD+DE L+ P+VS S+G A F +G R + +++LLE G
Sbjct: 118 LINRYTPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLRRNDPLKRLLLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
DV+++GG+SR +HG+ + P R NLTFRQ
Sbjct: 174 DVVVWGGDSRLFYHGIQPLKTGYHP-------FTGDCRYNLTFRQ 211
>gi|376286820|ref|YP_005159386.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
BH8]
gi|371584154|gb|AEX47819.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
BH8]
Length = 232
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 24/228 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKG----PGGFYQPGYNDGAKLRLRMMCLGLDW 291
+ PG+ L +L + +Q +VR +E+ + P +P G ++ + + LG W
Sbjct: 13 IAPGVAHLPGWLGVDKQAELVREIREIARTYADTPMAMLRPTLKSGGQMSVYQLHLGRYW 72
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
Y R VD + +P L + + A ++ +++ + P++
Sbjct: 73 -----HYPSYRYVDKIAGTTVPPVPDSLAALAPAALGAAAEVAEELAPWVE---TFVPEM 124
Query: 352 CIVNFYNTSGRLGLHQDR-DESRYSLKKGLPVVSFSVGDSAEFLYG-DERDANKAEKVLL 409
+VN+Y +G+H D +ESR PV+S S+GD A F G E + V L
Sbjct: 125 VLVNYYPPGSGMGMHVDEFEESR------APVISVSIGDEALFRMGHTESRTQPWDDVTL 178
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGD+++FGG R +HGV +N + P + L GR+N+T RQ
Sbjct: 179 CSGDLVVFGGPKRFAYHGVVRVNDATLP----DGCGLEQGRINITIRQ 222
>gi|376283854|ref|YP_005157064.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
31A]
gi|371577369|gb|AEX41037.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
31A]
Length = 232
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 24/228 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKG----PGGFYQPGYNDGAKLRLRMMCLGLDW 291
+ PG+ L +L + +Q +VR +E+ + P +P G ++ + + LG W
Sbjct: 13 IAPGVAHLPGWLGVDKQAELVREIREIARTYADTPMAMLRPTLKSGGQMSVYQLHLGRYW 72
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
Y R VD + +P L + + A ++ +++ + P++
Sbjct: 73 -----HYPSYRYVDKIAGTTVPPVPDSLAALAPAALRAAAEVAEELAPWVE---TFVPEM 124
Query: 352 CIVNFYNTSGRLGLHQDR-DESRYSLKKGLPVVSFSVGDSAEFLYG-DERDANKAEKVLL 409
+VN+Y +G+H D +ESR PV+S S+GD A F G E + V L
Sbjct: 125 VLVNYYPPGSGMGMHVDEFEESR------APVISVSIGDEALFRMGHTESRTQPWDDVTL 178
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGD+++FGG R +HGV +N + P + L GR+N+T RQ
Sbjct: 179 CSGDLVVFGGPKRFAYHGVVRVNDATLP----DGCGLEQGRINITIRQ 222
>gi|399065742|ref|ZP_10748043.1| alkylated DNA repair protein [Novosphingobium sp. AP12]
gi|398029271|gb|EJL22752.1| alkylated DNA repair protein [Novosphingobium sp. AP12]
Length = 219
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 32/224 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L+PG +LL + + L+ + + P F + G ++ + M C L W D
Sbjct: 22 LQPGAMLLGGFASPGADALLADLHRVAEVAP--FRKMVTPGGWQMSVAMTNCGSLGWMTD 79
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
+Y G +P F+ L +R+ +E + D PD C
Sbjct: 80 RTGYRYDALDPWTGNPWPEMPETFRCLAERA-AEVAGYARFD--------------PDSC 124
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y RL LHQDR+E + P+VS S+G +A FL+G + K +V L G
Sbjct: 125 LMNRYEPGSRLSLHQDRNERDFDA----PIVSVSLGLAATFLWGGATRSGKPMRVRLFHG 180
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
DV+++GG +R FHGV ++ + + R NLTFR
Sbjct: 181 DVVVWGGPARLTFHGVDTLRGSVSLAGEF--------RYNLTFR 216
>gi|94968035|ref|YP_590083.1| DNA-N1-methyladenine dioxygenase [Candidatus Koribacter versatilis
Ellin345]
gi|94550085|gb|ABF40009.1| DNA-N1-methyladenine dioxygenase [Candidatus Koribacter versatilis
Ellin345]
Length = 214
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 32/176 (18%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D + +Y + G IP F++L + + A
Sbjct: 65 CGRLGWVTDSKGYRYTTEDPSTGKRWPEIPEAFEKLAREAADAAG--------------- 109
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
+PD C++N Y R+ LHQDR+E + G P+VS S+G A F +G+ +
Sbjct: 110 FSGFAPDACLINRYAVGARMTLHQDRNEQDF----GQPIVSVSLGLPATFQFGEVENRRG 165
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINP--NSAPGALLENTMLRPGRLNLTFRQ 457
A+ V + GDV+++GG +R +HGV ++ + A G R NLTFR+
Sbjct: 166 AQNVAVRHGDVVVWGGTARLAYHGVLALKAGVHEATGEY---------RFNLTFRR 212
>gi|293395379|ref|ZP_06639663.1| alkylated DNA repair protein AlkB [Serratia odorifera DSM 4582]
gi|291422063|gb|EFE95308.1| alkylated DNA repair protein AlkB [Serratia odorifera DSM 4582]
Length = 215
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 64/109 (58%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y+ +L LHQD+DE + G P+VS S+G A F +G + ++K ++
Sbjct: 116 PDSCLMNRYDPGSKLSLHQDKDEHDF----GSPIVSVSLGLPAVFQFGGLQRSDKTRRIP 171
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG SR FHG+ + ++++ P R+N+T R+
Sbjct: 172 LAHGDVVVWGGPSRLCFHGIMPVKEG-------YHSLVGPHRINITLRK 213
>gi|383191518|ref|YP_005201646.1| alkylated DNA repair protein [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371589776|gb|AEX53506.1| alkylated DNA repair protein [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 217
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 11/129 (8%)
Query: 329 ALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVG 388
AL + + + E +PD C++N Y ++ LHQD+DE + G P+VS S+G
Sbjct: 98 ALFRRLAVSAAEEAGFAGFAPDACLINRYQPGAKMSLHQDKDEHDF----GQPIVSVSLG 153
Query: 389 DSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP 448
A F +G ++K ++V L GD++++GG SR +HGV + E+ +
Sbjct: 154 LPAVFQFGGMERSDKTQRVPLMHGDIVVWGGPSRLRYHGVLPLKAG-------EHPLTGS 206
Query: 449 GRLNLTFRQ 457
R NLTFR+
Sbjct: 207 YRFNLTFRK 215
>gi|398965838|ref|ZP_10681171.1| alkylated DNA repair protein [Pseudomonas sp. GM30]
gi|398146628|gb|EJM35361.1| alkylated DNA repair protein [Pseudomonas sp. GM30]
Length = 224
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 11/108 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD+DE Y+ P+VS S+G A FL+G +K++++
Sbjct: 125 PDSCLINQYVPGAKMSLHQDKDEHAYAA----PIVSLSLGLPAMFLFGGFARGDKSQRIP 180
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L GD++++GG R FHGV I P P L R+NLT R
Sbjct: 181 LLHGDMVVWGGVDRLRFHGVLPIKPGQHP-------RLGERRINLTLR 221
>gi|376292418|ref|YP_005164092.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
HC02]
gi|419859978|ref|ZP_14382624.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
bv. intermedius str. NCTC 5011]
gi|372109741|gb|AEX75801.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
HC02]
gi|387983565|gb|EIK57039.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
bv. intermedius str. NCTC 5011]
Length = 232
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 24/228 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKG----PGGFYQPGYNDGAKLRLRMMCLGLDW 291
+ PG+ L +L + +Q +VR +E+ + P +P G ++ + + LG W
Sbjct: 13 IAPGVAHLPGWLGVDKQAELVREIREIARTYADTPMAMLRPTLKSGGQMSVYQLHLGRYW 72
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
Y R VD + +P L + + A ++ +++ + P++
Sbjct: 73 -----HYPSYRYVDKIAGTTVPPVPDSLAALAPAALRAAAEVAEELAPWVE---TFVPEM 124
Query: 352 CIVNFYNTSGRLGLHQDR-DESRYSLKKGLPVVSFSVGDSAEFLYG-DERDANKAEKVLL 409
+VN+Y +G+H D +ESR PV+S S+GD A F G E + V L
Sbjct: 125 VLVNYYPPGSGMGMHVDEFEESR------APVISVSIGDEALFRMGHTESRTQPWDDVTL 178
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGD+++FGG R +HGV +N + P + L GR+N+T RQ
Sbjct: 179 CSGDLVVFGGPKRFAYHGVVRVNDATFP----DGCGLEQGRINITIRQ 222
>gi|421481580|ref|ZP_15929163.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Achromobacter
piechaudii HLE]
gi|400199895|gb|EJO32848.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Achromobacter
piechaudii HLE]
Length = 221
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P +PD C+VN Y RL LHQD++E Y G P+VS S+G A FL+G ++K
Sbjct: 117 FPGFAPDACLVNQYEPGSRLSLHQDKNERDY----GAPIVSVSLGMPALFLFGGHERSDK 172
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+V L GDV+++GG R +HGV P L + L R+N T R+
Sbjct: 173 TVRVPLLHGDVVVWGGVDRLRYHGV-------MPMKDLPHPRLGSRRINFTLRK 219
>gi|429087396|ref|ZP_19150128.1| Alkylated DNA repair protein AlkB [Cronobacter universalis NCTC
9529]
gi|426507199|emb|CCK15240.1| Alkylated DNA repair protein AlkB [Cronobacter universalis NCTC
9529]
Length = 116
Score = 75.5 bits (184), Expect = 5e-11, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 15/115 (13%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P +PD C++N Y +L LHQD+DE P+VS S+G A F +G + +
Sbjct: 12 PDFTPDACLINRYAPGAKLSLHQDKDEPDLRA----PIVSVSLGLPAVFQFGGLKRNDPL 67
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINP--NSAPGALLENTMLRPGRLNLTFRQ 457
+++LLE GDV+++GG SR +HG+ + +SA G R NLTFRQ
Sbjct: 68 KRLLLEHGDVVVWGGPSRLFYHGIQPLKAGQHSATGEY---------RYNLTFRQ 113
>gi|58040199|ref|YP_192163.1| alkylated DNA repair protein AlkB [Gluconobacter oxydans 621H]
gi|58002613|gb|AAW61507.1| Alkylated DNA repair protein AlkB [Gluconobacter oxydans 621H]
Length = 217
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 75/175 (42%), Gaps = 32/175 (18%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C W DP +Y + G +P + L R+ +EA
Sbjct: 62 CGACGWIADPSGYRYSRTDPQSGQPWPAMPDALRHLAVRAAAEAG--------------- 106
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
+ P C++N Y ++GLHQDRDE PVVS S+G A F +G R +
Sbjct: 107 YASFDPASCLINRYGPGAKMGLHQDRDEG----MPEAPVVSVSLGVPARFSFGGLRRTDP 162
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINP--NSAPGALLENTMLRPGRLNLTFR 456
+ L GDV+++GG SR +HGVS I + GA+ R NLTFR
Sbjct: 163 KRIIELLDGDVVVWGGVSRFAWHGVSPIRETFHQQTGAM---------RYNLTFR 208
>gi|160899230|ref|YP_001564812.1| 2OG-Fe(II) oxygenase [Delftia acidovorans SPH-1]
gi|160364814|gb|ABX36427.1| 2OG-Fe(II) oxygenase [Delftia acidovorans SPH-1]
Length = 219
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y RL LHQDRDE G P+VS S+G A FL+G A++ +V
Sbjct: 120 PDACLINQYLPGTRLSLHQDRDER----DLGAPIVSVSLGMPATFLFGGLARADRTARVP 175
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+ GDV+++GG R HGV + P +L R+NLTFR+
Sbjct: 176 LQHGDVVVWGGVDRLRHHGVLPLKDQPHP-------LLGGRRINLTFRK 217
>gi|297519271|ref|ZP_06937657.1| 2OG-Fe(II) oxygenase [Escherichia coli OP50]
Length = 208
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 29/146 (19%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPWP----------AMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAP 437
GDV+++GGESR +HG+ + P
Sbjct: 173 GDVVVWGGESRLFYHGIQPLKAGFHP 198
>gi|416343775|ref|ZP_11677675.1| Alkylated DNA repair protein AlkB [Escherichia coli EC4100B]
gi|320199807|gb|EFW74396.1| Alkylated DNA repair protein AlkB [Escherichia coli EC4100B]
Length = 213
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
DPQT K +P F L QR+ + A P PD
Sbjct: 82 DPQTNKPWP----------AMPQSFHNLCQRAATAAG---------------YPDFQPDA 116
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
C++N Y +L LHQD+DE L+ P+VS S+G A F +G + + +++LLE
Sbjct: 117 CLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLKRNDPLKRLLLEH 172
Query: 412 GDVLIFGGESRHVFHGVSSI 431
GDV+++GGESR +HG+ +
Sbjct: 173 GDVVVWGGESRLFYHGIQPL 192
>gi|422606732|ref|ZP_16678739.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. mori str. 301020]
gi|330890381|gb|EGH23042.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. mori str. 301020]
Length = 228
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 28/174 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D +Y G +P F QL + + AHA + D
Sbjct: 76 CGQLGWITDRHGYRYTATDPQTGLVWPAMPDAFMQLAKDA---AHA--------AGYADF 124
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
+P D C++N Y ++ LHQD++E + PVVS S+G A F +G ++K
Sbjct: 125 MP----DACVINRYIPGAKMSLHQDKNEYDHRW----PVVSVSLGIPATFQFGGLLRSDK 176
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++ L GDV+++GGE R FHG+ + E+ +L R+NLTFR+
Sbjct: 177 TQRISLFHGDVVVWGGEDRLRFHGILPVKQA-------EHPLLGEQRINLTFRK 223
>gi|163797477|ref|ZP_02191428.1| 2OG-Fe(II) oxygenase superfamily protein [alpha proteobacterium
BAL199]
gi|159177226|gb|EDP61785.1| 2OG-Fe(II) oxygenase superfamily protein [alpha proteobacterium
BAL199]
Length = 217
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C++N Y RL LHQD+DE Y+ P+VS S+G A F +G + A+
Sbjct: 113 FPGFVPDACLINRYEPGARLSLHQDKDERDYAH----PIVSVSLGLPATFQFGGRKRADS 168
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
KV L GDV+++GG +R HGV ++ P R NLT R+
Sbjct: 169 VSKVALSHGDVVVWGGPARLHHHGVLTLRDGEHPATGRT-------RFNLTLRR 215
>gi|385330769|ref|YP_005884720.1| alkylated DNA repair protein AlkB [Marinobacter adhaerens HP15]
gi|311693919|gb|ADP96792.1| alkylated DNA repair protein AlkB [Marinobacter adhaerens HP15]
Length = 216
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--DPQT 295
G V+L+ + + L+ I + P F G + M C G L W D +
Sbjct: 21 GAVVLRQFALPNAESLMADIETVTSEAP--FRHMKTPGGHAMSAAMSCCGDLGWVTDRRG 78
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y + G +P+ F++L RS +E PD C++N
Sbjct: 79 YRYQAEDPESGRPWPAMPAAFRELA-RSAAETAGF--------------EGFEPDACLIN 123
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVL 415
Y ++GLHQD+DE ++ P+VS S+G F +G + + + +V L GDV+
Sbjct: 124 RYQPGAKMGLHQDKDEQDFTQ----PIVSVSLGLPMVFQFGGLKRSERPIRVPLAHGDVV 179
Query: 416 IFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++GG +R +HGV ++ E+ + R NLTFR+
Sbjct: 180 VWGGPARMRYHGVLTLKAG-------EHPLTGGYRYNLTFRR 214
>gi|56460357|ref|YP_155638.1| alkylated DNA repair protein [Idiomarina loihiensis L2TR]
gi|56179367|gb|AAV82089.1| Alkylated DNA repair protein [Idiomarina loihiensis L2TR]
Length = 217
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD C++N Y ++GLHQD++E+ +S P+VSFS G F++G + ++K +K
Sbjct: 116 FQPDSCLINVYTPGAKMGLHQDKNEADFSK----PIVSFSFGLPITFMWGGFKRSDKYQK 171
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+ D L++GG+ R +HGV + P + R+NLT RQ
Sbjct: 172 FSLQHADALVWGGKDRLRYHGVQQLKEAMHP-------LTGRCRVNLTIRQ 215
>gi|333914654|ref|YP_004488386.1| 2OG-Fe(II) oxygenase [Delftia sp. Cs1-4]
gi|333744854|gb|AEF90031.1| 2OG-Fe(II) oxygenase [Delftia sp. Cs1-4]
Length = 216
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y RL LHQDRDE G P+VS S+G A FL+G A+ +V
Sbjct: 117 PDACLINQYLPGTRLSLHQDRDER----DLGAPIVSVSLGMPATFLFGGLARADSTARVP 172
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L+ GDV+++GG R HGV + P +L R+NLTFR+
Sbjct: 173 LQHGDVVVWGGVDRLRHHGVLPLKDQPHP-------LLGGRRINLTFRK 214
>gi|453329289|dbj|GAC88481.1| alkylated DNA repair protein AlkB [Gluconobacter thailandicus NBRC
3255]
Length = 218
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 319 LVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKK 378
L + E AL ++ + E P SP C++N Y ++GLHQDRDE +
Sbjct: 83 LTGKPWPEMPALFLDLAREAAAEAGYPDFSPASCLINRYEPGAKMGLHQDRDEDDLAS-- 140
Query: 379 GLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP- 437
P+VS S+G A F +G + ++ L GDV+++GG SR +HGVS + P
Sbjct: 141 --PIVSVSLGVPARFAFGGLLKTDPVQRYDLLHGDVVVWGGVSRLAWHGVSPVRETFHPQ 198
Query: 438 -GALLENTMLRPGRLNLTFR 456
GA+ R NLTFR
Sbjct: 199 TGAM---------RYNLTFR 209
>gi|28870291|ref|NP_792910.1| DNA alkylation damage repair protein AlkB [Pseudomonas syringae pv.
tomato str. DC3000]
gi|28853538|gb|AAO56605.1| DNA alkylation damage repair protein AlkB [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 228
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD+DE + PVVS S+G A F +G + ++K ++
Sbjct: 126 PDACLINRYIPGAKMSLHQDKDEHDHRW----PVVSVSLGIPAIFQFGGMQRSDKTRRIS 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GGE R FHG+ I E+ +L R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGILPIKQA-------EHPLLGEQRINLTFRK 223
>gi|289626271|ref|ZP_06459225.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. aesculi str. NCPPB
3681]
gi|289646192|ref|ZP_06477535.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. aesculi str. 2250]
gi|422581918|ref|ZP_16657058.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|422597018|ref|ZP_16671295.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|298158669|gb|EFH99733.1| Alkylated DNA repair protein AlkB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330866765|gb|EGH01474.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330987312|gb|EGH85415.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. lachrymans str. M301315]
Length = 228
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 28/174 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D +Y G +P F QL + + AHA + D
Sbjct: 76 CGQLGWITDRHGYRYTATDPQTGLVWPAMPDAFMQLAKDA---AHA--------AGYADF 124
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
+P D C++N Y ++ LHQD++E + PVVS S+G A F +G ++K
Sbjct: 125 MP----DACLINRYIPGAKMSLHQDKNEYDHRW----PVVSVSLGIPATFQFGGLLRSDK 176
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++ L GDV+++GGE R FHG+ + E+ +L R+NLTFR+
Sbjct: 177 TQRISLFHGDVVVWGGEDRLRFHGILPVKQA-------EHPLLGEQRINLTFRK 223
>gi|257485107|ref|ZP_05639148.1| alkylated DNA repair protein AlkB [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|422681628|ref|ZP_16739897.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|331010971|gb|EGH91027.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
Length = 228
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 28/174 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D +Y G +P F QL + + AHA + D
Sbjct: 76 CGQLGWITDRHGYRYTATDPQTGLVWPAMPDAFMQLAKDA---AHA--------AGYADF 124
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
+P D C++N Y ++ LHQD++E + PVVS S+G A F +G ++K
Sbjct: 125 MP----DACLINRYIPGAKMSLHQDKNEYDHRW----PVVSVSLGIPATFQFGGLLRSDK 176
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+++ L GDV+++GGE R FHG+ + E+ +L R+NLTFR+
Sbjct: 177 TQRISLFHGDVVVWGGEDRLRFHGILPVKQA-------EHPLLGEQRINLTFRK 223
>gi|422657902|ref|ZP_16720340.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|331016516|gb|EGH96572.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. lachrymans str. M302278]
Length = 233
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD+DE + PVVS S+G A F +G + ++K ++
Sbjct: 131 PDACLINRYIPGAKMSLHQDKDEHDHRW----PVVSVSLGIPAIFQFGGMQRSDKTRRIS 186
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GGE R FHG+ I E+ +L R+NLTFR+
Sbjct: 187 LFHGDVVVWGGEDRLRFHGILPIKQA-------EHPLLGEQRINLTFRK 228
>gi|414341168|ref|YP_006982689.1| alkylated DNA repair protein AlkB [Gluconobacter oxydans H24]
gi|411026503|gb|AFV99757.1| alkylated DNA repair protein AlkB [Gluconobacter oxydans H24]
Length = 218
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 319 LVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKK 378
L + E AL ++ + E P SP C++N Y ++GLHQDRDE +
Sbjct: 83 LTGKPWPEMPALFLDLAREAAAEAGYPDFSPASCLINRYEPGAKMGLHQDRDEDDLAS-- 140
Query: 379 GLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP- 437
P+VS S+G A F +G + ++ L GDV+++GG SR +HGVS + P
Sbjct: 141 --PIVSVSLGVPARFAFGGLLKMDPVQRYDLLHGDVVVWGGVSRLAWHGVSPVRETFHPQ 198
Query: 438 -GALLENTMLRPGRLNLTFR 456
GA+ R NLTFR
Sbjct: 199 TGAM---------RYNLTFR 209
>gi|410086063|ref|ZP_11282777.1| Alkylated DNA repair protein AlkB [Morganella morganii SC01]
gi|409767611|gb|EKN51687.1| Alkylated DNA repair protein AlkB [Morganella morganii SC01]
Length = 211
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQ-PGYNDGAKLRLRMM-CLGLDW--DP 293
P LLK +L+ +++L+ I + P Q PG G ++ M C W D
Sbjct: 15 PDAYLLKGFLSDEDEMLLAEIRRLTAISPFRHMQTPG---GYRMSAAMSSCGTYGWISDA 71
Query: 294 QTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
+ +Y + G +P F L Q++ A SPD C+
Sbjct: 72 RGYRYSPADPLTGNPWPPLPDAFLSLSQQAAERAG---------------FHGFSPDSCL 116
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGD 413
+N Y + LHQDRDE + P+VSFS+G +F +G + + LE GD
Sbjct: 117 INCYAPGAGMSLHQDRDEP----DRRQPIVSFSLGLPVQFQFGGSERHHPLKTFALEHGD 172
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
VL++GG SR +H V + P A R NLTFR
Sbjct: 173 VLVWGGRSRLNYHAVRPLRAGVHPLAGAR-------RFNLTFR 208
>gi|393757595|ref|ZP_10346419.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Alcaligenes
faecalis subsp. faecalis NCIB 8687]
gi|393165287|gb|EJC65336.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Alcaligenes
faecalis subsp. faecalis NCIB 8687]
Length = 215
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
L PD C++N+Y+ + LHQDR+E L+ P+VS S+G A FL+G +
Sbjct: 114 LQPDTCLINYYDEHAHMSLHQDRNER--DLQH--PIVSVSLGREALFLWGGATRSAPVRT 169
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ L GDVLI+ G SR FHG+ + + P + GR+NLTFR+
Sbjct: 170 LRLRDGDVLIWWGPSRLNFHGIRRLEGPAHP-------LWGSGRVNLTFRK 213
>gi|148553473|ref|YP_001261055.1| DNA-N1-methyladenine dioxygenase [Sphingomonas wittichii RW1]
gi|148498663|gb|ABQ66917.1| DNA-N1-methyladenine dioxygenase [Sphingomonas wittichii RW1]
Length = 214
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD C++N Y RL LHQDR+E + P++S S+G A FL+G R ++ +
Sbjct: 113 FQPDACLINRYIPGARLSLHQDRNERDVAH----PIISVSLGLPATFLFGGARRYDRPRR 168
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
LE D+ +GG SR FHGV+ + E+ ML R+NLTFR+
Sbjct: 169 FALEHCDIAAWGGPSRLHFHGVAELKDG-------EHDMLGRQRINLTFRK 212
>gi|114799223|ref|YP_760234.1| alkylated DNA repair protein AlkB [Hyphomonas neptunium ATCC 15444]
gi|114739397|gb|ABI77522.1| alkylated DNA repair protein AlkB [Hyphomonas neptunium ATCC 15444]
Length = 216
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 11/108 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y +L LHQDR+E ++ P+VS S+G A F +G R A+ K
Sbjct: 117 PDTCLINRYEPGAKLSLHQDRNEREFAH----PIVSVSLGLPATFQFGGLRRADPIRKYA 172
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L GDV ++GG SR HGV ++ + P L RLNLTFR
Sbjct: 173 LRHGDVAVWGGPSRLCHHGVLALKEGAHP-------KLGRMRLNLTFR 213
>gi|376289503|ref|YP_005161750.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
C7 (beta)]
gi|372102899|gb|AEX66496.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
C7 (beta)]
Length = 232
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 24/228 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKG----PGGFYQPGYNDGAKLRLRMMCLGLDW 291
+ PG+ L +L + +Q +VR +E+ + P +P G ++ + + LG W
Sbjct: 13 IAPGVAHLPGWLGVDKQAELVREIREIARTYADTPMAMLRPTLKSGGQMSVYQLHLGRYW 72
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
+ +Y K D P V S + A ++ V A ++
Sbjct: 73 HYPSYRYVDK-IADTTVPPVPDSLAALAPAALRAAAEVAEELAPWVE-------AFVTEM 124
Query: 352 CIVNFYNTSGRLGLHQDR-DESRYSLKKGLPVVSFSVGDSAEFLYG-DERDANKAEKVLL 409
+VN+Y +G+H D +ESR PV+S S+GD A F G E + V L
Sbjct: 125 VLVNYYPPGSGMGMHVDEFEESR------APVISVSIGDEALFRMGHTESRTQPWDDVTL 178
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
SGD+++FGG R +HGV +N + P + L GR+N+T RQ
Sbjct: 179 CSGDLVVFGGPKRFAYHGVVRVNDATLP----DGCGLEQGRINITIRQ 222
>gi|422672199|ref|ZP_16731563.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. aceris str. M302273]
gi|330969937|gb|EGH70003.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. aceris str. M302273]
Length = 228
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQDRDE + PVVS S+G A F +G ++K +++
Sbjct: 126 PDACLINRYIPGAKMSLHQDRDEYDHRW----PVVSVSLGIPAIFQFGGLLRSDKTQRIS 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GGE R FHG+ I E+ L R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGILPIKQA-------EHPQLGEQRINLTFRK 223
>gi|399020663|ref|ZP_10722790.1| alkylated DNA repair protein [Herbaspirillum sp. CF444]
gi|398094430|gb|EJL84793.1| alkylated DNA repair protein [Herbaspirillum sp. CF444]
Length = 215
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y R+ LHQD++E + P+VS S+G A FL+G A+K ++
Sbjct: 116 PDACLINRYVPGARMSLHQDKNEGDMAQ----PIVSVSLGLPAAFLFGGSERADKPVRMR 171
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
LESGDV+++GG +R FHGV ++ A G + + R NLTFR+
Sbjct: 172 LESGDVVVWGGLARLRFHGVDTL----AEGV---HELTGKCRYNLTFRR 213
>gi|322834330|ref|YP_004214357.1| 2OG-Fe(II) oxygenase [Rahnella sp. Y9602]
gi|384259509|ref|YP_005403443.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rahnella aquatilis
HX2]
gi|321169531|gb|ADW75230.1| 2OG-Fe(II) oxygenase [Rahnella sp. Y9602]
gi|380755485|gb|AFE59876.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Rahnella aquatilis
HX2]
Length = 217
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 37/234 (15%)
Query: 229 DWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CL 287
+W E L PG V+L+ + L+ I + G P F G + + M C
Sbjct: 14 NWREE--LCPGAVVLRGAALAEDVALLAEIDRIAGLVP--FQYRATPGGYAMSVAMTNCG 69
Query: 288 GLDWDPQTRKYGKKRQVDGCEP----SVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
+ W T + G + Q E +P F+ L + +A
Sbjct: 70 DVGW--VTDRAGYRYQATSPESHQQWPPMPELFRSLAVSAAGQAG--------------- 112
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
PD C++N Y ++ LHQD+DE + G P+VS S+G A F +G ++K
Sbjct: 113 FAGFEPDACLINRYQPGAKMSLHQDKDEHDF----GQPIVSVSLGLPAVFQFGGMERSDK 168
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++V L GD++++GG SR +HGV + E+ + R NLTFR+
Sbjct: 169 TQRVPLMHGDIVVWGGPSRLRYHGVLPLKAG-------EHPLTGSYRFNLTFRK 215
>gi|422638088|ref|ZP_16701520.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae Cit 7]
gi|330950484|gb|EGH50744.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae Cit 7]
Length = 228
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y R+ LHQDR+E + PVVS S+G A F +G ++K +++
Sbjct: 126 PDACLINRYIPGARMSLHQDRNEHDHCW----PVVSVSLGIPAIFQFGGLLRSDKTQRIS 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GGE R FHG+ I E+ L R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGILPIKQA-------EHPQLGEQRINLTFRK 223
>gi|296114878|ref|ZP_06833526.1| 2OG-Fe(II) oxygenase [Gluconacetobacter hansenii ATCC 23769]
gi|295978584|gb|EFG85314.1| 2OG-Fe(II) oxygenase [Gluconacetobacter hansenii ATCC 23769]
Length = 220
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 12/108 (11%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD ++N Y R+GLHQDRDE + P+VS S+G +A FL+G A +++
Sbjct: 122 PDSGLINRYGPGDRMGLHQDRDE-----RCDAPIVSISLGVAAVFLWGGPTRAAPVRRIV 176
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ GDV+++GG SR +HG+ AP L + + R NLTFR
Sbjct: 177 VRHGDVVVWGGASRLTWHGI-------APLLLAHHPLCGDVRYNLTFR 217
>gi|398802226|ref|ZP_10561442.1| alkylated DNA repair protein [Polaromonas sp. CF318]
gi|398100695|gb|EJL90928.1| alkylated DNA repair protein [Polaromonas sp. CF318]
Length = 217
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y RL LHQD+DE P+VS S+G A FL+G ++ +
Sbjct: 118 PDACLINRYEPGARLSLHQDKDEGHLDA----PIVSVSLGLPAVFLFGGLNRGDRPARYR 173
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV ++GG SR +HGV AP A E+ L R+NLTFR+
Sbjct: 174 LLHGDVAVWGGPSRLAYHGV-------APLAEGEHARLGRQRINLTFRR 215
>gi|66046216|ref|YP_236057.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. syringae B728a]
gi|63256923|gb|AAY38019.1| DNA-N1-methyladenine dioxygenase [Pseudomonas syringae pv. syringae
B728a]
Length = 228
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQDRDE + PVVS S+G A F +G +K +++
Sbjct: 126 PDACLINRYIPGAKMSLHQDRDEYDHRW----PVVSVSLGIPAIFQFGGLLRGDKTQRIS 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GGE R FHG+ I E+ L R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGILPIKQA-------EHPQLGEQRINLTFRK 223
>gi|340777083|ref|ZP_08697026.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Acetobacter aceti
NBRC 14818]
Length = 200
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 83/184 (45%), Gaps = 29/184 (15%)
Query: 277 GAKLRLRMMCLG-LDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKM 333
G ++ + M G W D +Y + +G V+P F+ LV+ + A
Sbjct: 38 GHRMSVAMASFGDYGWVSDRSGYRYTPVQPENGQPWPVMPDVFRSLVEEATEAAG----- 92
Query: 334 DSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEF 393
P ++N Y RL LHQD+DE +P+VS S+G +A F
Sbjct: 93 ----------FPHPPLQAGLLNLYRPGTRLSLHQDKDEE----DAEIPIVSVSLGVAATF 138
Query: 394 LYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNL 453
L+G A + L GDV+++GG SR +FHGV AP A+ + + RLN+
Sbjct: 139 LWGGLDRAAPVRRFRLSHGDVVVWGGPSRMMFHGV-------APLAVSSHPLTGECRLNM 191
Query: 454 TFRQ 457
TFRQ
Sbjct: 192 TFRQ 195
>gi|440745816|ref|ZP_20925105.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae BRIP39023]
gi|440372079|gb|ELQ08893.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae BRIP39023]
Length = 228
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y R+ LHQDR+E + PVVS S+G A F +G ++K +++
Sbjct: 126 PDACLINRYIPGARMSLHQDRNEHDHRW----PVVSVSLGIPAIFQFGGLLRSDKTQRIS 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GGE R FHG+ I E+ L R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGILPIKQA-------EHPQLGEQRINLTFRK 223
>gi|365108423|ref|ZP_09336324.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citrobacter
freundii 4_7_47CFAA]
gi|363640779|gb|EHL80229.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Citrobacter
freundii 4_7_47CFAA]
Length = 216
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L G V+L+ + L+ I + P F Q G + + M C L W D
Sbjct: 15 LASGAVILRRFAFDSAPSLLQAIAAVARQSP--FRQMVTPGGYTMSVAMTNCGHLGWTTD 72
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y + G +P F L Q++ + A D PD C
Sbjct: 73 QHGYLYSPFDPLTGTHWPPLPDAFADLCQQAATAA-----------GYAD----FQPDAC 117
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
++N Y +L LHQD+DE L+ P+VS S+G A F +G R + +++LLE G
Sbjct: 118 LINRYTPGAKLSLHQDKDEP--DLRA--PIVSVSLGLPAIFQFGGLRRNDPLKRLLLEHG 173
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
DV+++GG SR +HG+ + P + R NLTFR
Sbjct: 174 DVVVWGGNSRLFYHGIQPLKTGYHP-------LTGDCRYNLTFR 210
>gi|452130389|ref|ZP_21942961.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Bordetella holmesii
H558]
gi|451920314|gb|EMD70460.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Bordetella holmesii
H558]
Length = 216
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 11/107 (10%)
Query: 350 DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLL 409
D C++N Y R+ LHQDR+E ++ P+VS S+G A FL+G R +++ +++L
Sbjct: 114 DACLINHYTPGARMSLHQDRNEQDFAA----PIVSVSLGLPAIFLFGGLRRDDRSARIVL 169
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ GDV ++GG R FHGV + P M+ R+NLT R
Sbjct: 170 QHGDVAVWGGVDRLRFHGVLPLADGRHP-------MVGRQRINLTLR 209
>gi|323136455|ref|ZP_08071537.1| 2OG-Fe(II) oxygenase [Methylocystis sp. ATCC 49242]
gi|322398529|gb|EFY01049.1| 2OG-Fe(II) oxygenase [Methylocystis sp. ATCC 49242]
Length = 207
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ C+VN Y+ ++GLHQDRDE+ + P++S S+G F R A+K+ +
Sbjct: 102 PEACLVNVYSDDAKMGLHQDRDEADFDA----PILSLSLGADCRFRLSGPRRADKSIAFV 157
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG-RLNLTFRQ 457
L +GD L+ G SR FHGV I P A L + G R+NLT R+
Sbjct: 158 LAAGDALVLSGPSRRSFHGVDRILPTVH--AELPAPLAGVGARVNLTLRR 205
>gi|167643975|ref|YP_001681638.1| 2OG-Fe(II) oxygenase [Caulobacter sp. K31]
gi|167346405|gb|ABZ69140.1| 2OG-Fe(II) oxygenase [Caulobacter sp. K31]
Length = 212
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P PD ++N Y R+GLHQDRDE+ PV+S S+GD+A F G
Sbjct: 99 PQTPPDAALINLYRGEARMGLHQDRDEA----DPRFPVLSISLGDTAVFRIGGTSRKGPT 154
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ L SGDV G +R FHGV I P S+ +L+ GR+N+T R+
Sbjct: 155 RSLKLSSGDVCRLSGPARLAFHGVDRILPGSS--SLVAGG----GRINITLRR 201
>gi|312960795|ref|ZP_07775300.1| alkylated DNA repair protein AlkB [Pseudomonas fluorescens WH6]
gi|311284453|gb|EFQ63029.1| alkylated DNA repair protein AlkB [Pseudomonas fluorescens WH6]
Length = 221
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y ++ LHQD++E Y PVVS S+G A FL+G ++K +K
Sbjct: 120 FAPDACLINRYVPGAKMSLHQDKNERDYRA----PVVSVSLGLPAIFLFGGRERSDKPKK 175
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ L GDV+I+GG R FHGV I P ++ R+NLT R
Sbjct: 176 IPLFHGDVVIWGGIDRLRFHGVMPIKDGVHP-------IMGAQRINLTLR 218
>gi|398942633|ref|ZP_10670437.1| alkylated DNA repair protein [Pseudomonas sp. GM41(2012)]
gi|398160531|gb|EJM48800.1| alkylated DNA repair protein [Pseudomonas sp. GM41(2012)]
Length = 221
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 26/171 (15%)
Query: 286 CLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILP 345
LG D +Y + + G +P F +L Q + EA D +P
Sbjct: 74 VLGWTTDRSGYRYTRDDPLTGKPWPKMPEVFLELAQAAAREA-----------GFADFVP 122
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
D C++N Y ++ LHQD+DE+ Y+ P+VS S+G A FL+G +K++
Sbjct: 123 ----DSCLINRYVPGAKMSLHQDKDEASYAA----PIVSVSLGLPAMFLFGGFERGDKSQ 174
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+V L GD++++GG R +HGV I P L R+N TFR
Sbjct: 175 RVPLFHGDIVVWGGVDRLRYHGVLPIKDGLHP-------RLGEQRINFTFR 218
>gi|302381322|ref|YP_003817145.1| 2OG-Fe(II) oxygenase [Brevundimonas subvibrioides ATCC 15264]
gi|302191950|gb|ADK99521.1| 2OG-Fe(II) oxygenase [Brevundimonas subvibrioides ATCC 15264]
Length = 201
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 254 LIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--DPQTRKYGKKRQVDGCEPS 310
L+ + + P FY+P G +RM LG + W D +Y G
Sbjct: 25 LLAEVQTTIAAAP--FYRPVTPGGKPFSVRMTNLGRVGWVSDRAGYRYQPTHPETGAPWP 82
Query: 311 VIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRD 370
IP+ L ++++ A PD C+VN Y + R+GLHQDRD
Sbjct: 83 AIPARLLDL-WNTLTDGSA------------------PPDACLVNLYRETARMGLHQDRD 123
Query: 371 ESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSS 430
E+ + PVVS S+GD+A F G + + L SGDV G SR HG+
Sbjct: 124 EADLT----APVVSVSLGDTALFRIG-AAEGGPTRSIRLASGDVCALTGASRLARHGIDR 178
Query: 431 INPNSAPGALLENTMLRPGRLNLTFRQ 457
+ S+ LL + GR+NLT R+
Sbjct: 179 LLVGSS--KLLGDG----GRINLTLRR 199
>gi|389877752|ref|YP_006371317.1| alkylated DNA repair protein [Tistrella mobilis KA081020-065]
gi|388528536|gb|AFK53733.1| alkylated DNA repair protein [Tistrella mobilis KA081020-065]
Length = 216
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 312 IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDE 371
+P+ F L R+ + A P PD C++N Y RLG+HQDRDE
Sbjct: 92 MPALFGDLADRAATAAG---------------FPGFRPDACLINLYTPGARLGMHQDRDE 136
Query: 372 SRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
+ P+VS S+G A F +G + + L GDV+++GG R HGV +
Sbjct: 137 GDLT----QPIVSVSLGLPAVFQFGGPSRRDPVTNIDLVHGDVVVWGGAWRLAHHGVKEL 192
Query: 432 NPNSAPGALLENTMLRPGRLNLTFR 456
S P T R R+N+TFR
Sbjct: 193 RDGSHPA-----TGQR--RINITFR 210
>gi|241608428|ref|XP_002405982.1| conserved hypothetical protein [Ixodes scapularis]
gi|215500738|gb|EEC10232.1| conserved hypothetical protein [Ixodes scapularis]
Length = 287
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 90/224 (40%), Gaps = 36/224 (16%)
Query: 219 EKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQEL---------GKGPGGF 269
E+ C + + E + PG++LL + T Q L VR C E K P
Sbjct: 54 ERLGLCAERLPAAYELVDAPGLLLLPNPFTAEGQRLWVRRCLEEYTRPPHVTNVKAPATV 113
Query: 270 YQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHA 329
+ G LR + L DWD T+ Y K R+ S P ++L A
Sbjct: 114 LRAGDPFYGALRWATVGLHHDWD--TKVYDKTRR------SPFPDCLREL-------ATG 158
Query: 330 LIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGD 389
L ++ A P+ IVN+Y LG H D E L PVVS S G
Sbjct: 159 LARLAG--------FSAFQPEAAIVNYYAMDSALGGHVDNSE----LALDAPVVSASFGQ 206
Query: 390 SAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINP 433
+A FL G + +LL SGDVL+ G +R +H V + P
Sbjct: 207 TAVFLVGGATRERRPRALLLRSGDVLVMSGPARLAYHAVPRVLP 250
>gi|410943893|ref|ZP_11375634.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Gluconobacter
frateurii NBRC 101659]
Length = 266
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 63/122 (51%), Gaps = 15/122 (12%)
Query: 337 VSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYG 396
V+ E P SP C++N Y ++GLHQDRDE S P+VS S+G A F +G
Sbjct: 149 VAAKEAGYPDFSPSSCLINRYEPGAKMGLHQDRDEDDLSS----PIVSVSLGIPAHFAFG 204
Query: 397 DERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLRPGRLNLT 454
+ ++ L GDV+++GG SR +HGVS I P GA+ R NLT
Sbjct: 205 GLLRTDPVQRHDLFHGDVVVWGGISRLAWHGVSPIRETFHPQTGAM---------RYNLT 255
Query: 455 FR 456
FR
Sbjct: 256 FR 257
>gi|399000076|ref|ZP_10702807.1| alkylated DNA repair protein [Pseudomonas sp. GM18]
gi|398130488|gb|EJM19825.1| alkylated DNA repair protein [Pseudomonas sp. GM18]
Length = 226
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 26/160 (16%)
Query: 297 KYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNF 356
+Y + G +P F +L Q + EA + A PD C++N
Sbjct: 90 QYTRNDPQTGAPWPEMPEVFFELAQAAAREAGFM---------------AFVPDSCLINR 134
Query: 357 YNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLI 416
Y R+ LHQD++E+ Y+ P+VS S+G A FL+G + K +V L GD+++
Sbjct: 135 YVPGARMSLHQDKNENAYTA----PIVSVSLGLPATFLFGGFERSAKTRRVPLFHGDIVV 190
Query: 417 FGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+GG R +HGV I P L R+N TFR
Sbjct: 191 WGGVDRLRYHGVLPIKDGQHP-------RLGEQRINFTFR 223
>gi|398875822|ref|ZP_10630983.1| alkylated DNA repair protein [Pseudomonas sp. GM67]
gi|398205598|gb|EJM92378.1| alkylated DNA repair protein [Pseudomonas sp. GM67]
Length = 226
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 11/108 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD+DE+ Y+ P+VS S+G A FL+G ++K+++V
Sbjct: 127 PDSCLINRYVPGAKMSLHQDKDEASYAA----PIVSVSLGLPAMFLFGGFERSDKSQRVP 182
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L GD++++GG R +HGV I P + R+N TFR
Sbjct: 183 LLHGDIVVWGGVDRLRYHGVLPIKDGQHP-------RMGEQRINFTFR 223
>gi|399062675|ref|ZP_10746650.1| alkylated DNA repair protein, partial [Novosphingobium sp. AP12]
gi|398033443|gb|EJL26744.1| alkylated DNA repair protein, partial [Novosphingobium sp. AP12]
Length = 212
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 27/145 (18%)
Query: 312 IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDE 371
+P F++L +R+ +E + +PD C++N Y RL LHQDR+E
Sbjct: 92 MPETFRRLAERA-AEVAGYAR--------------FAPDSCLMNRYEPGSRLSLHQDRNE 136
Query: 372 SRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
+ P+VS S+G A FL+G + K +V L GDV+++GG +R FHGV ++
Sbjct: 137 RDFDA----PIVSVSLGLPATFLWGGATRSEKPMRVRLFHGDVVVWGGPARLTFHGVDTM 192
Query: 432 NPNSAPGALLENTMLRPGRLNLTFR 456
+ + LE R NLTFR
Sbjct: 193 RGSGS----LEGEY----RHNLTFR 209
>gi|88812263|ref|ZP_01127514.1| 2OG-Fe(II) oxygenase [Nitrococcus mobilis Nb-231]
gi|88790514|gb|EAR21630.1| 2OG-Fe(II) oxygenase [Nitrococcus mobilis Nb-231]
Length = 216
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y RL LHQDRDE + P+VS S+G A FL+G + ++ +
Sbjct: 115 FAPDACLINRYRPGARLTLHQDRDERDFKA----PIVSVSLGLPAVFLFGGVQRRDRPRR 170
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ +ESGDV ++GG +R +HG++ + + P + R+NLT R+
Sbjct: 171 IRMESGDVAVWGGPARLAYHGIAPLVDGNHP-------LTGRCRINLTLRK 214
>gi|422652732|ref|ZP_16715511.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330965794|gb|EGH66054.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. actinidiae str. M302091]
Length = 233
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
PD C++N Y ++ LHQD++E + PVVS S+G A F +G + ++K
Sbjct: 128 GFVPDACLINRYIPGAKMSLHQDKNEHDHRW----PVVSVSLGIPAVFQFGGMQRSDKTR 183
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++ L GDV+++GGE R FHG+ I E+ +L R+NLTFR+
Sbjct: 184 RISLFHGDVVVWGGEDRLRFHGILQIK-------QAEHPLLGEQRINLTFRK 228
>gi|421850913|ref|ZP_16283851.1| DNA-N1-methyladenine dioxygenase [Acetobacter pasteurianus NBRC
101655]
gi|371458238|dbj|GAB29054.1| DNA-N1-methyladenine dioxygenase [Acetobacter pasteurianus NBRC
101655]
Length = 197
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 91/222 (40%), Gaps = 31/222 (13%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--DPQT 295
G LL + R LI I + P F G ++ + M+ C L W D
Sbjct: 2 GAALLGGFARERADELISHIHDLSAQAP--FRHMETRGGKRMSVAMLNCGPLGWVSDRSG 59
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y + G P F L R+ E +D +P D C++N
Sbjct: 60 YRYTASDPLTGKAWPAFPPLFLDLAARAAQEM-----------GFQDFVP----DACLIN 104
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVL 415
Y RL LHQD DE + P+VS S+G A FL+G + + + GDV+
Sbjct: 105 RYQPGARLSLHQDMDEQDHV----APIVSVSLGLPATFLWGGLHRNMRPARHQVFHGDVV 160
Query: 416 IFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
++GG SR +FHGV + P T+ R NLTFR+
Sbjct: 161 VWGGPSRMIFHGVDVLKDGFHPAT---GTV----RFNLTFRK 195
>gi|421494610|ref|ZP_15941955.1| hypothetical protein MU9_3126 [Morganella morganii subsp. morganii
KT]
gi|455739382|ref|YP_007505648.1| Alkylated DNA repair protein AlkB [Morganella morganii subsp.
morganii KT]
gi|400191126|gb|EJO24277.1| hypothetical protein MU9_3126 [Morganella morganii subsp. morganii
KT]
gi|455420945|gb|AGG31275.1| Alkylated DNA repair protein AlkB [Morganella morganii subsp.
morganii KT]
Length = 211
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQ-PGYNDGAKLRLRMM-CLGLDW--DP 293
P LLK +L+ +++L+ I + P Q PG G ++ M C W D
Sbjct: 15 PDAYLLKGFLSDEDEMLLAEIRRLTAISPFRHMQTPG---GYRMSAAMSSCGTYGWVSDA 71
Query: 294 QTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
+ +Y + G +P F L Q++ A SPD C+
Sbjct: 72 KGYRYSPTDPLTGNPWPPLPDAFLLLSQQAAERAG---------------FHGFSPDSCL 116
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGD 413
+N Y + LHQD+DE + P+VSFS+G +F +G + + LE GD
Sbjct: 117 INCYAPGAGMSLHQDKDEP----DRRQPIVSFSLGLPVQFQFGGSERHHPLKTFALEHGD 172
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
VL++GG SR +H V + P A R NLTFR
Sbjct: 173 VLVWGGRSRLNYHAVRPVRAGVHPLAGAR-------RFNLTFR 208
>gi|290771264|dbj|BAI81891.1| alkB homolog [Schizosaccharomyces pombe]
Length = 297
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 78/182 (42%), Gaps = 28/182 (15%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR + LG +D T++Y + G P + V++ + E+ + ++ +
Sbjct: 134 KLRWVTLGEQYDWTTKEYPDPSKSPG-----FPKDLGDFVEKVVKESTDFLHWKAEAA-- 186
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
IVNFY+ L H D E +L P++S S+G +L G E
Sbjct: 187 ------------IVNFYSPGDTLSAHIDESEEDLTL----PLISLSMGLDCIYLIGTESR 230
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG-----RLNLTF 455
+ K + L SGDV+I G SR FH V I PNS P LL G R+N
Sbjct: 231 SEKPSALRLHSGDVVIMTGTSRKAFHAVPKIIPNSTPNYLLTGNKAWDGWISRKRVNFNV 290
Query: 456 RQ 457
RQ
Sbjct: 291 RQ 292
>gi|398885052|ref|ZP_10639972.1| alkylated DNA repair protein [Pseudomonas sp. GM60]
gi|398193093|gb|EJM80213.1| alkylated DNA repair protein [Pseudomonas sp. GM60]
Length = 221
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 11/108 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD+DE+ Y+ P+VS S+G A FL+G ++K+++V
Sbjct: 122 PDSCLINRYVPGAKMSLHQDKDEASYAA----PIVSVSLGLPAMFLFGGFERSDKSQRVP 177
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L GD++++GG R +HGV I P + R+N TFR
Sbjct: 178 LLHGDIVVWGGVDRLRYHGVLPIKDGQHP-------RMGEQRINFTFR 218
>gi|398926576|ref|ZP_10662538.1| alkylated DNA repair protein [Pseudomonas sp. GM48]
gi|398170650|gb|EJM58581.1| alkylated DNA repair protein [Pseudomonas sp. GM48]
Length = 226
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 11/108 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD+DE Y+ P+VS S+G A FL+G + ++K+++V
Sbjct: 127 PDSCLINRYIPGAKMSLHQDKDEHSYAA----PIVSVSLGLPAMFLFGGFKRSDKSQRVP 182
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L GD++++GG R +HGV I P L R+N TFR
Sbjct: 183 LLHGDIVVWGGVDRLRYHGVLPIKEGHHP-------RLGEQRINFTFR 223
>gi|429241087|ref|NP_596553.3| alpha-ketoglutarate-dependent dioxygenase [Schizosaccharomyces
pombe 972h-]
gi|408360323|sp|O60066.3|ALKBH_SCHPO RecName: Full=Alpha-ketoglutarate-dependent dioxygenase abh1;
AltName: Full=Alkylated DNA repair protein alkB homolog
gi|347834387|emb|CAA18657.3| alkB homolog/2-OG-Fe(II) oxygenase family (predicted)
[Schizosaccharomyces pombe]
Length = 302
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 78/182 (42%), Gaps = 28/182 (15%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR + LG +D T++Y + G P + V++ + E+ + ++ +
Sbjct: 139 KLRWVTLGEQYDWTTKEYPDPSKSPG-----FPKDLGDFVEKVVKESTDFLHWKAEAA-- 191
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
IVNFY+ L H D E +L P++S S+G +L G E
Sbjct: 192 ------------IVNFYSPGDTLSAHIDESEEDLTL----PLISLSMGLDCIYLIGTESR 235
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG-----RLNLTF 455
+ K + L SGDV+I G SR FH V I PNS P LL G R+N
Sbjct: 236 SEKPSALRLHSGDVVIMTGTSRKAFHAVPKIIPNSTPNYLLTGNKAWDGWISRKRVNFNV 295
Query: 456 RQ 457
RQ
Sbjct: 296 RQ 297
>gi|213970412|ref|ZP_03398541.1| DNA alkylation damage repair protein AlkB [Pseudomonas syringae pv.
tomato T1]
gi|213924883|gb|EEB58449.1| DNA alkylation damage repair protein AlkB [Pseudomonas syringae pv.
tomato T1]
Length = 228
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD++E + PVVS S+G A F +G + ++K ++
Sbjct: 126 PDACLINRYIPGAKMSLHQDKNEHDHRW----PVVSVSLGIPAIFQFGGMQRSDKTRRIS 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GGE R FHG+ I E+ +L R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGILPIK-------QAEHPLLGEQRINLTFRK 223
>gi|334564542|ref|ZP_08517533.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
bovis DSM 20582]
Length = 206
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P PD C+VN Y ++GLHQDRDE P+VS SVG + F +G +
Sbjct: 99 FPGFEPDSCLVNRYARDAKMGLHQDRDEE----SGRWPIVSVSVGLTGRFAFGGHARTDP 154
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+V L SGDV+++GG R FHG+ + P + R NLT R+
Sbjct: 155 VRRVDLHSGDVVVWGGVDRFRFHGIDRATGPTDP-------VFGDHRYNLTLRR 201
>gi|71735492|ref|YP_274464.1| alkylated DNA repair protein AlkB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|416016074|ref|ZP_11563532.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. glycinea str. B076]
gi|416026717|ref|ZP_11570094.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. glycinea str. race
4]
gi|71556045|gb|AAZ35256.1| alkylated DNA repair protein AlkB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320324743|gb|EFW80817.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. glycinea str. B076]
gi|320328850|gb|EFW84849.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. glycinea str. race
4]
Length = 228
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD++E + PVVS S+G A F +G ++K +++
Sbjct: 126 PDACLINRYIPGAKMSLHQDKNEYDHRW----PVVSVSLGIPATFQFGGLLRSDKTQRIS 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GGE R FHG+ + E+ +L R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGILPVKQA-------EHPLLGEQRINLTFRK 223
>gi|242240587|ref|YP_002988768.1| 2OG-Fe(II) oxygenase [Dickeya dadantii Ech703]
gi|242132644|gb|ACS86946.1| 2OG-Fe(II) oxygenase [Dickeya dadantii Ech703]
Length = 217
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y +L LHQD+DE + P+VS S+G SA FL+G + ++ +
Sbjct: 117 PDACLINRYAVGSKLSLHQDKDEQDLTQ----PIVSVSLGLSAVFLFGGLTRSEPCQRKV 172
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG +R +H + + P + ++ R NLTFR+
Sbjct: 173 LSHGDVVVWGGPARLCYHAILPLKRGPLPTGMSDDV-----RFNLTFRK 216
>gi|289672979|ref|ZP_06493869.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. syringae FF5]
gi|422668514|ref|ZP_16728370.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. aptata str. DSM 50252]
gi|330980879|gb|EGH78982.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 228
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y R+ LHQDR+E + PVVS S+G A F +G + ++K +++
Sbjct: 126 PDACLINRYIPGARMSLHQDRNEHDHRW----PVVSVSLGIPAIFQFGGQLRSDKTQRIS 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++G E R FHG+ I E+ L R+NLTFR+
Sbjct: 182 LFHGDVVVWGDEDRLRFHGILPIKQA-------EHPQLGEQRINLTFRK 223
>gi|422405368|ref|ZP_16482412.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330880213|gb|EGH14362.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 228
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD++E + PVVS S+G A F +G ++K +++
Sbjct: 126 PDACLINRYIPGAKMSLHQDKNEYDHRW----PVVSVSLGIPATFQFGGLLRSDKTQRIS 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GGE R FHG+ + E+ +L R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGILPVKQA-------EHPLLGEQRINLTFRK 223
>gi|398990575|ref|ZP_10693755.1| alkylated DNA repair protein [Pseudomonas sp. GM24]
gi|399012963|ref|ZP_10715280.1| alkylated DNA repair protein [Pseudomonas sp. GM16]
gi|398114780|gb|EJM04583.1| alkylated DNA repair protein [Pseudomonas sp. GM16]
gi|398143942|gb|EJM32807.1| alkylated DNA repair protein [Pseudomonas sp. GM24]
Length = 221
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 11/107 (10%)
Query: 350 DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLL 409
D C++N Y ++ LHQD+DE YS P+VS S+G A FL+G ++K++++ L
Sbjct: 123 DSCLINRYVPGAKMSLHQDKDEKAYSA----PIVSLSLGLPAMFLFGGFNRSDKSQRIAL 178
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
GD++++GG R FHGV I P L R+NLTFR
Sbjct: 179 LHGDMVVWGGVDRLRFHGVLPIKQGRHP-------RLGEQRINLTFR 218
>gi|422629960|ref|ZP_16695161.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial
[Pseudomonas syringae pv. pisi str. 1704B]
gi|330939213|gb|EGH42618.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. pisi str. 1704B]
Length = 230
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y R+ LHQDR+E + PVVS S+G A F +G + ++K +++
Sbjct: 126 PDACLINRYIPGARMSLHQDRNEHDHRW----PVVSVSLGIPAIFQFGGQLRSDKTQRIS 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++G E R FHG+ I E+ L R+NLTFR+
Sbjct: 182 LFHGDVVVWGDEDRLRFHGILPIKQA-------EHPQLGEQRINLTFRK 223
>gi|304392428|ref|ZP_07374369.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Ahrensia sp.
R2A130]
gi|303295532|gb|EFL89891.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Ahrensia sp.
R2A130]
Length = 206
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 12/110 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P C+VNFY ++GLHQD DE+ + PV+S S+G++ F G + +
Sbjct: 106 PQACLVNFYTDDAKMGLHQDSDET----NRAAPVLSVSLGNACLFRIGGNLRNDPTQSFR 161
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP-GRLNLTFRQ 457
LESGDV+ G +R FHGV I ++ N +L+ GRLN+T R+
Sbjct: 162 LESGDVMALTGPARDAFHGVDRIYADT-------NDLLKDGGRLNVTLRR 204
>gi|301381195|ref|ZP_07229613.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. tomato Max13]
gi|302058538|ref|ZP_07250079.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. tomato K40]
gi|302132608|ref|ZP_07258598.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. tomato NCPPB 1108]
Length = 233
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD++E + PVVS S+G A F +G + ++K ++
Sbjct: 131 PDACLINRYIPGAKMSLHQDKNEHDHRW----PVVSVSLGIPAIFQFGGMQRSDKTRRIS 186
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GGE R FHG+ I E+ +L R+NLTFR+
Sbjct: 187 LFHGDVVVWGGEDRLRFHGILPIKQA-------EHPLLGEQRINLTFRK 228
>gi|424072540|ref|ZP_17809961.1| DNA alkylation damage repair protein AlkB [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407997502|gb|EKG37939.1| DNA alkylation damage repair protein AlkB [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 228
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQDR+E + PVVS S+G A F +G ++K +++
Sbjct: 126 PDACLINRYIPGAKMSLHQDRNEHDHRW----PVVSVSLGIPAIFQFGGLLRSDKTQRIS 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GGE R FHG+ I E+ L R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGILPIKQA-------EHPQLGEQRINLTFRK 223
>gi|424067954|ref|ZP_17805410.1| DNA alkylation damage repair protein AlkB [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|407999298|gb|EKG39683.1| DNA alkylation damage repair protein AlkB [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 228
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQDR+E + PVVS S+G A F +G ++K +++
Sbjct: 126 PDACLINRYIPGAKMSLHQDRNEHDHRW----PVVSVSLGIPAIFQFGGLLRSDKTQRIS 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GGE R FHG+ I E+ L R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGILPIKQA-------EHPQLGEQRINLTFRK 223
>gi|302186734|ref|ZP_07263407.1| 2OG-Fe(II) oxygenase [Pseudomonas syringae pv. syringae 642]
Length = 228
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQDR+E + PVVS S+G A F +G ++K +++
Sbjct: 126 PDACLINRYIPGAKMSLHQDRNEYDHRW----PVVSVSLGIPAIFQFGGLLRSDKTQRIS 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GGE R FHG+ I E+ L R+NLTFR+
Sbjct: 182 LFHGDVVVWGGEDRLRFHGILPIKQA-------EHPQLGEQRINLTFRK 223
>gi|452127017|ref|ZP_21939600.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Bordetella holmesii
F627]
gi|451922112|gb|EMD72257.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Bordetella holmesii
F627]
Length = 126
Score = 72.4 bits (176), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 11/108 (10%)
Query: 350 DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLL 409
D C++N Y R+ LHQDR+E ++ P+VS S+G A FL+G R +++ +++L
Sbjct: 24 DACLINHYTPGARMSLHQDRNEQDFAA----PIVSVSLGLPAIFLFGGLRRDDRSARIVL 79
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
+ GDV ++GG R FHGV + P M+ R+NLT R
Sbjct: 80 QHGDVAVWGGVDRLRFHGVLPLADGRHP-------MVGRQRINLTLRH 120
>gi|290998193|ref|XP_002681665.1| predicted protein [Naegleria gruberi]
gi|284095290|gb|EFC48921.1| predicted protein [Naegleria gruberi]
Length = 314
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 58/267 (21%)
Query: 198 HRLHNVEPFDICLSRRRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVR 257
H L N P ++ + + KE + + +T +G PG ++K +T +QI ++
Sbjct: 32 HNLENNTPENLQVLEQSTMSFTKEELLSKKI-YTFKG--YPGFYVIKDLMTPEKQIYWIK 88
Query: 258 ICQELGKGPGGFYQPGYNDGAKL------------------RLRMMCLGLDWDPQTRKYG 299
E P +G L +L LG ++ TRKY
Sbjct: 89 QALETYPNPPNITNHTMKNGEILDIFKRSVEGDESAKNYLKKLAWCTLGYQYEWTTRKYH 148
Query: 300 KKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPA------LSPDICI 353
K + ++ + N D++ P+ I
Sbjct: 149 KDK---------------------------FVQFPHDIGNFCDLIACQCNYGPYKPEAAI 181
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGD 413
VNFY+ +G H D++ Y + K P++S S+G + FL G E + + + LESGD
Sbjct: 182 VNFYSKDRLMGGH--VDDAEYEMTK--PIISLSIGSKSIFLLGGETRDTEPKAIFLESGD 237
Query: 414 VLIFGGESRHVFHGVSSINPNSAPGAL 440
+I GG +R+ FHG++ I ++ P L
Sbjct: 238 CMIMGGRARYCFHGIARILKDTIPEYL 264
>gi|398915078|ref|ZP_10657134.1| alkylated DNA repair protein [Pseudomonas sp. GM49]
gi|398177003|gb|EJM64700.1| alkylated DNA repair protein [Pseudomonas sp. GM49]
Length = 226
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y ++ LHQD+DE Y+ P+VS S+G A FL+G + ++K ++
Sbjct: 125 FAPDSCLINRYIPGAKMSLHQDKDEYSYAA----PIVSVSLGLPAMFLFGGFKRSDKNQR 180
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
V L GD++++GG R +HGV I P L R+N TFR
Sbjct: 181 VPLLHGDIVVWGGVDRLRYHGVLPIKDGHHP-------RLGGQRINFTFR 223
>gi|423096095|ref|ZP_17083891.1| alkylated DNA repair protein AlkB [Pseudomonas fluorescens Q2-87]
gi|397887278|gb|EJL03761.1| alkylated DNA repair protein AlkB [Pseudomonas fluorescens Q2-87]
Length = 225
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD C++N Y R+ LHQD++E + P+VS S+G A F +G ++K+++
Sbjct: 124 FEPDSCLINRYVPGARMSLHQDKNERELTA----PIVSMSLGLPATFQFGGFERSDKSQR 179
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
V L GD++++GG R +HGV + P E+ L R+NLTFR
Sbjct: 180 VPLFHGDIVVWGGVDRLRYHGVLPLKPG-------EHPRLGAQRINLTFR 222
>gi|398840095|ref|ZP_10597333.1| alkylated DNA repair protein [Pseudomonas sp. GM102]
gi|398111113|gb|EJM01003.1| alkylated DNA repair protein [Pseudomonas sp. GM102]
Length = 226
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y R+ LHQD++E Y+ P+VS S+G A FL+G + K+++V
Sbjct: 127 PDSCLINRYIPGARMSLHQDKNEDSYAA----PIVSVSLGLPATFLFGGFERSAKSQRVP 182
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L GD++++GG R +HGV I P L R+N TFR
Sbjct: 183 LLHGDIVVWGGVDRLRYHGVLPIKEGYHP-------QLGEQRINFTFR 223
>gi|398874169|ref|ZP_10629399.1| alkylated DNA repair protein [Pseudomonas sp. GM74]
gi|398196440|gb|EJM83447.1| alkylated DNA repair protein [Pseudomonas sp. GM74]
Length = 226
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 11/108 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD+DE Y+ P+VS S+G A FL+G ++K+++V
Sbjct: 127 PDSCLINRYVPGAKMSLHQDKDEHSYAA----PIVSVSLGLPAMFLFGGFVRSDKSQRVP 182
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L GD++++GG R +HGV I P L R+N TFR
Sbjct: 183 LLHGDIVVWGGVDRLRYHGVLPIKDGHHP-------KLGEQRINFTFR 223
>gi|375292239|ref|YP_005126778.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
INCA 402]
gi|371581910|gb|AEX45576.1| putative alkylated DNA repair protein [Corynebacterium diphtheriae
INCA 402]
Length = 185
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 12/111 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDR-DESRYSLKKGLPVVSFSVGDSAEFLYG-DERDANKAEK 406
P++ +VN+Y R+G+H D +ESR PV+S S+GD A F G E +
Sbjct: 75 PEMVLVNYYPPGSRMGMHVDEFEESR------APVISVSIGDEALFRMGHTESRTQPWDD 128
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V L SGD+++FGG R +HGV +N + P + L GR+N+T RQ
Sbjct: 129 VTLCSGDLVVFGGPKRFAYHGVVRVNDATLP----DGCGLEQGRINITIRQ 175
>gi|427799231|ref|ZP_18967226.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
gi|414064604|gb|EKT45510.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
Length = 188
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ PD C++N Y +L LHQD+DE L+ P+VS S+G A F +G R ++ +
Sbjct: 111 SFQPDACLINRYAPGAKLSLHQDKDEP--DLRA--PIVSVSLGVPAVFQFGGLRRSDPIQ 166
Query: 406 KVLLESGDVLIFGGESRHVFH 426
++LLE GD++++GGESR VF+
Sbjct: 167 RILLEHGDIVVWGGESRLVFY 187
>gi|383817221|ref|ZP_09972599.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Serratia sp. M24T3]
gi|383293912|gb|EIC82268.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Serratia sp. M24T3]
Length = 217
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD+DE G P+VS S+G A F +G ++K ++V
Sbjct: 118 PDACLINRYQIGAKMSLHQDKDEE----DMGQPIVSISLGLPAVFQFGGLERSDKTQRVN 173
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GD++++GG +R +HG+ + E+ + R NLTFR+
Sbjct: 174 LTHGDIVVWGGPARLRYHGILPLKAG-------EHPLTGQYRFNLTFRK 215
>gi|422298898|ref|ZP_16386479.1| DNA alkylation damage repair protein AlkB [Pseudomonas avellanae
BPIC 631]
gi|407989334|gb|EKG31677.1| DNA alkylation damage repair protein AlkB [Pseudomonas avellanae
BPIC 631]
Length = 233
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 11/111 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
PD C++N Y ++ LHQD++E + PVVS S+G A F +G + ++K
Sbjct: 128 GFVPDACLINRYIPGAKMSLHQDKNEYDHRW----PVVSVSLGIPAVFQFGGMQRSDKTR 183
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
++ L GDV+++GGE R FHG+ I P +L R+NLTFR
Sbjct: 184 RISLFHGDVVVWGGEDRLRFHGILPIKQADHP-------LLGEQRINLTFR 227
>gi|404400906|ref|ZP_10992490.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
fuscovaginae UPB0736]
Length = 220
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y ++ LHQDR+E + PVVS S+G A FL+G A+K+++
Sbjct: 117 FAPDACLINRYVPGAKMSLHQDRNERDLNA----PVVSVSLGLPAMFLFGGHDRADKSQR 172
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ L GDV+++GG R FHG+ I P +L R+N T R
Sbjct: 173 IPLLHGDVVVWGGVDRLRFHGILPIRDGHHP-------VLGAQRINFTLR 215
>gi|398905346|ref|ZP_10652771.1| alkylated DNA repair protein [Pseudomonas sp. GM50]
gi|398174592|gb|EJM62382.1| alkylated DNA repair protein [Pseudomonas sp. GM50]
Length = 226
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y R+ LHQD++E Y+ P+VS S+G A FL+G + K+++V
Sbjct: 127 PDSCLINRYIPGARMSLHQDKNEDSYAA----PIVSVSLGLPATFLFGGFERSAKSQRVP 182
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L GD++++GG R +HG+ I P L R+N TFR
Sbjct: 183 LLHGDIVVWGGVDRLRYHGILPIKEGYHP-------QLGEQRINFTFR 223
>gi|422013181|ref|ZP_16359809.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Providencia
burhodogranariea DSM 19968]
gi|414103389|gb|EKT64964.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Providencia
burhodogranariea DSM 19968]
Length = 222
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y RL LHQD++E S P+VS S+G A FL+G ++
Sbjct: 117 FNPDACLINRYYPGSRLTLHQDKNERDMSQ----PIVSVSLGLPAMFLFGGLTREQTCKR 172
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG SR +HGV + P E+ R NLTFR+
Sbjct: 173 FPLTQGDVMVWGGPSRLNYHGVMPLKDAIPPSPAQESV-----RYNLTFRR 218
>gi|422588782|ref|ZP_16663448.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330875357|gb|EGH09506.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae pv. morsprunorum str. M302280]
Length = 233
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD++E + PVVS S+G A F +G + ++K ++
Sbjct: 131 PDACLINRYIPGAKMSLHQDKNEHDHRW----PVVSVSLGIPAVFQFGGMQRSDKTRRIS 186
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG+ R FHG+ I E+ +L R+NLTFR+
Sbjct: 187 LFHGDVVVWGGDDRLRFHGILPIK-------QAEHPLLGEQRINLTFRK 228
>gi|398894434|ref|ZP_10646671.1| alkylated DNA repair protein [Pseudomonas sp. GM55]
gi|398182462|gb|EJM69978.1| alkylated DNA repair protein [Pseudomonas sp. GM55]
Length = 226
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y ++ LHQD+DE Y P+VS S+G A FL+G ++K+++
Sbjct: 125 FAPDSCLINRYIPGAKMSLHQDKDEHSYDA----PIVSVSLGLPAMFLFGGFARSDKSQR 180
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ L GD++++GG R +HGV I P L R+N TFR
Sbjct: 181 IPLLHGDIVVWGGVDRLRYHGVLPIKDGHHP-------RLGEQRINFTFR 223
>gi|426409307|ref|YP_007029406.1| alkylated DNA repair protein AlkB [Pseudomonas sp. UW4]
gi|426267524|gb|AFY19601.1| alkylated DNA repair protein AlkB [Pseudomonas sp. UW4]
Length = 226
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 11/108 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD+DE Y+ P+VS S+G A FL+G ++K++++
Sbjct: 127 PDSCLINRYIPGAKMSLHQDKDEHSYAA----PIVSVSLGLPAIFLFGGFARSDKSQRIP 182
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L GD++++GG R +HGV I P L R+N TFR
Sbjct: 183 LLHGDIVVWGGMDRLRYHGVLPIKDGCHP-------RLGEQRINFTFR 223
>gi|421744559|ref|ZP_16182534.1| alkylated DNA repair protein [Streptomyces sp. SM8]
gi|406687053|gb|EKC91099.1| alkylated DNA repair protein [Streptomyces sp. SM8]
Length = 158
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ--T 295
PG V + +L Q +V C+ +GP + G + ++ + LG W P T
Sbjct: 14 PGAVHVPEWLPEERQRELVEACRGWARGPVPMRRTELPGGGVMSVQSVSLGWHWSPYRYT 73
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R+ G V+G + +P +L +R++++A+ D A PD+ +VN
Sbjct: 74 RRAG---DVNGAPVAPLPEWLVELGRRAVADAY----QDEAAGR------AYRPDVALVN 120
Query: 356 FYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD 397
FY +G+HQD+DE + PVVS SVGD+ F G+
Sbjct: 121 FYGAGATMGMHQDKDE-----RSDAPVVSLSVGDACLFRLGN 157
>gi|422609342|ref|ZP_16681250.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial
[Pseudomonas syringae pv. japonica str. M301072]
gi|330901726|gb|EGH33145.1| alpha-ketoglutarate-dependent dioxygenase AlkB, partial
[Pseudomonas syringae pv. japonica str. M301072]
Length = 205
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y R+ LHQDR+E + PVVS S+G A F +G ++K +++
Sbjct: 103 PDACLINRYIPGARMSLHQDRNEHDHRW----PVVSVSLGIPAIFQFGGLLRSDKTQRIS 158
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++G E R FHG+ I E+ L R+NLTFR+
Sbjct: 159 LFHGDVVVWGDEDRLRFHGILPIKQA-------EHPQLGEQRINLTFRK 200
>gi|398954578|ref|ZP_10676048.1| alkylated DNA repair protein [Pseudomonas sp. GM33]
gi|398152269|gb|EJM40793.1| alkylated DNA repair protein [Pseudomonas sp. GM33]
Length = 221
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 11/108 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD+DE Y+ P+VS S+G A FL+G ++K++++
Sbjct: 122 PDSCLINRYIPGAKMSLHQDKDEHSYAA----PIVSVSLGLPAMFLFGGFARSDKSQRIP 177
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L GD++++GG R +HGV I P L R+N TFR
Sbjct: 178 LLHGDIVVWGGVDRLRYHGVLPIKDGFHP-------RLGEQRINFTFR 218
>gi|398861760|ref|ZP_10617376.1| alkylated DNA repair protein [Pseudomonas sp. GM79]
gi|398231965|gb|EJN17945.1| alkylated DNA repair protein [Pseudomonas sp. GM79]
Length = 226
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 13/109 (11%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD-ERDANKAEKV 407
PD C++N Y R+ LHQD++E Y+ P+VS S+G A FL+G ER AN +++V
Sbjct: 127 PDSCLINRYIPGARMSLHQDKNEDSYAA----PIVSVSLGLPATFLFGGFERSAN-SQRV 181
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
L GD++++GG R +HGV I P L R+N TFR
Sbjct: 182 PLLHGDIVVWGGVDRLRYHGVLPIKQGYHP-------QLGEQRINFTFR 223
>gi|392952948|ref|ZP_10318502.1| N1-methyladenine/N3-methylcytosine demethylase [Hydrocarboniphaga
effusa AP103]
gi|391858463|gb|EIT68992.1| N1-methyladenine/N3-methylcytosine demethylase [Hydrocarboniphaga
effusa AP103]
Length = 216
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 15/130 (11%)
Query: 330 LIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGD 389
++ + +N LS D C+VN Y RL LHQDRDE P++S S+G
Sbjct: 98 FTELAQQAANAAGYHDELSTDACLVNRYEPGSRLTLHQDRDEHDVQA----PIISVSLGV 153
Query: 390 SAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP--GALLENTMLR 447
A F++G + ++ L GDV+++GG SR +HGV I P G+L
Sbjct: 154 PAIFVFGRNTRSGPTKRSRLVHGDVVVWGGVSRLAYHGVQPIAQAQHPATGSL------- 206
Query: 448 PGRLNLTFRQ 457
R NLTFR+
Sbjct: 207 --RYNLTFRK 214
>gi|78066397|ref|YP_369166.1| DNA-N1-methyladenine dioxygenase [Burkholderia sp. 383]
gi|77967142|gb|ABB08522.1| DNA-N1-methyladenine dioxygenase [Burkholderia sp. 383]
Length = 214
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD C+VN Y RL LHQD++E ++ P+VS S+G A FL+G ++ K
Sbjct: 113 FEPDACLVNRYAPGARLSLHQDKNEQDFNA----PIVSVSLGMKAVFLFGGHERSDPTTK 168
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V L GDV ++GG R +HGV + + P LL R+N TFR+
Sbjct: 169 VPLYHGDVAVWGGVDRLRYHGVMPLKED--PHGLLGRQ-----RINFTFRK 212
>gi|33598680|ref|NP_886323.1| alkylated DNA repair protein [Bordetella parapertussis 12822]
gi|33574810|emb|CAE39471.1| alkylated DNA repair protein [Bordetella parapertussis]
Length = 216
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y R+ LHQD++E + G P+VS S+G A FL+G R + ++
Sbjct: 116 PDACLVNRYAPGARMSLHQDKNERDF----GAPIVSVSLGLPAMFLFGGARRDERPARIP 171
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV ++GG R +HGV + P +L R+N T R+
Sbjct: 172 LLHGDVAVWGGVDRLRYHGVMPLAEGQHP-------LLGRQRINFTLRR 213
>gi|33591569|ref|NP_879213.1| alkylated DNA repair protein [Bordetella pertussis Tohama I]
gi|33603634|ref|NP_891194.1| alkylated DNA repair protein [Bordetella bronchiseptica RB50]
gi|384202855|ref|YP_005588594.1| alkylated DNA repair protein [Bordetella pertussis CS]
gi|408417085|ref|YP_006627792.1| alkylated DNA repair protein [Bordetella pertussis 18323]
gi|410422112|ref|YP_006902561.1| alkylated DNA repair protein [Bordetella bronchiseptica MO149]
gi|410474709|ref|YP_006897990.1| alkylated DNA repair protein [Bordetella parapertussis Bpp5]
gi|412341042|ref|YP_006969797.1| alkylated DNA repair protein [Bordetella bronchiseptica 253]
gi|427816645|ref|ZP_18983709.1| alkylated DNA repair protein [Bordetella bronchiseptica 1289]
gi|427820131|ref|ZP_18987194.1| alkylated DNA repair protein [Bordetella bronchiseptica D445]
gi|427822725|ref|ZP_18989787.1| alkylated DNA repair protein [Bordetella bronchiseptica Bbr77]
gi|33571211|emb|CAE40717.1| alkylated DNA repair protein [Bordetella pertussis Tohama I]
gi|33577759|emb|CAE35024.1| alkylated DNA repair protein [Bordetella bronchiseptica RB50]
gi|332380969|gb|AEE65816.1| alkylated DNA repair protein [Bordetella pertussis CS]
gi|401779255|emb|CCJ64756.1| alkylated DNA repair protein [Bordetella pertussis 18323]
gi|408444819|emb|CCJ51595.1| alkylated DNA repair protein [Bordetella parapertussis Bpp5]
gi|408449407|emb|CCJ61095.1| alkylated DNA repair protein [Bordetella bronchiseptica MO149]
gi|408770876|emb|CCJ55675.1| alkylated DNA repair protein [Bordetella bronchiseptica 253]
gi|410567645|emb|CCN25216.1| alkylated DNA repair protein [Bordetella bronchiseptica 1289]
gi|410571131|emb|CCN19345.1| alkylated DNA repair protein [Bordetella bronchiseptica D445]
gi|410587990|emb|CCN03041.1| alkylated DNA repair protein [Bordetella bronchiseptica Bbr77]
Length = 216
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y R+ LHQD++E + G P+VS S+G A FL+G R + ++
Sbjct: 116 PDACLVNRYAPGARMSLHQDKNERDF----GAPIVSVSLGLPAMFLFGGARRDERPARIP 171
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV ++GG R +HGV + P +L R+N T R+
Sbjct: 172 LLHGDVAVWGGVDRLRYHGVMPLAEGQHP-------LLGRQRINFTLRR 213
>gi|407365114|ref|ZP_11111646.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
mandelii JR-1]
Length = 226
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 335 SKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFL 394
++ + E PD C++N Y ++ LHQD++E Y+ P+VS S+G A FL
Sbjct: 113 AQAAAREAGFAGFVPDSCLINRYVPGAKMSLHQDKNEGSYAA----PIVSVSLGLPAMFL 168
Query: 395 YGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLT 454
+G ++K+++V L GD++++GG R +HGV I P L R+N T
Sbjct: 169 FGGFERSDKSQRVPLLHGDIVVWGGVDRLRYHGVLPIKDGHHP-------HLGEQRINFT 221
Query: 455 FR 456
FR
Sbjct: 222 FR 223
>gi|429770172|ref|ZP_19302251.1| putative alkylated DNA repair protein AlkB [Brevundimonas diminuta
470-4]
gi|429185434|gb|EKY26414.1| putative alkylated DNA repair protein AlkB [Brevundimonas diminuta
470-4]
Length = 216
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 90/229 (39%), Gaps = 43/229 (18%)
Query: 238 PGMVLLKHYLTIREQI-LIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--DP 293
PG L L Q L+ + L P Y+P G +RM G L W D
Sbjct: 18 PGFRLWPGLLDATAQADLLAEVRAGLEAAP--LYRPTTPGGRPFSVRMSNFGALGWVSDR 75
Query: 294 QTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
+Y V G IP+ R +S AL S PD C+
Sbjct: 76 AGYRYQPPHPVTGAPWPAIPA-------RLLSLWDALTGWPSP------------PDACL 116
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD----ANKAEKVLL 409
+N Y ++GLHQDRDE + PV+S S+GD+A F G D V L
Sbjct: 117 INLYQGEAKMGLHQDRDERDLT----APVLSVSLGDTAVFRIGPAPDETGKGGATSTVRL 172
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRP--GRLNLTFR 456
SGDV G +R HG+ + L ++ L P GR+NLT R
Sbjct: 173 ASGDVCALTGPARLARHGIDRL--------LAGSSRLLPGGGRVNLTLR 213
>gi|330810289|ref|YP_004354751.1| alpha-ketoglutarate-dependent dioxygenase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327378397|gb|AEA69747.1| Alpha-ketoglutarate-dependent dioxygenase (alkylated DNA repair
protein) [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 226
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 28/173 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D +Y G +P+ F++L Q + +AH
Sbjct: 77 CGALGWTTDRSGYRYTAHDPQTGHPWPDMPAVFRELAQAAARQAH--------------- 121
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
PD C++N Y R+ LHQD++E + P+VS S+G A F +G ++K
Sbjct: 122 FEHFEPDACLINRYVPGARMSLHQDKNERSLAA----PIVSMSLGLPAVFQFGGFERSDK 177
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ ++ L GD++++GG R +HGV + P L R+NLTFR
Sbjct: 178 SLRIPLFHGDIVVWGGVDRLRYHGVLPLKEGQHP-------RLGTQRINLTFR 223
>gi|440721132|ref|ZP_20901537.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae BRIP34876]
gi|440729297|ref|ZP_20909480.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae BRIP34881]
gi|443643584|ref|ZP_21127434.1| Alkylated DNA repair protein AlkB [Pseudomonas syringae pv.
syringae B64]
gi|440359199|gb|ELP96524.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae BRIP34881]
gi|440364221|gb|ELQ01357.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas
syringae BRIP34876]
gi|443283601|gb|ELS42606.1| Alkylated DNA repair protein AlkB [Pseudomonas syringae pv.
syringae B64]
Length = 228
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQDR+E + PVVS S+G A F +G ++K +++
Sbjct: 126 PDACLINCYIPGAKMSLHQDRNEHDHRW----PVVSVSLGIPAIFQFGGLLRSDKTQRIS 181
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++G E R FHG+ I E+ L R+NLTFR+
Sbjct: 182 LFHGDVVVWGDEDRLRFHGILPIKQA-------EHPQLGEQRINLTFRK 223
>gi|388544340|ref|ZP_10147628.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
M47T1]
gi|388277523|gb|EIK97097.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas sp.
M47T1]
Length = 218
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+PD C++N Y R+ LHQDR+E YS P+VS S+G A F G ++ +++ +
Sbjct: 117 FTPDACLINRYVPGARMSLHQDRNERDYSA----PIVSVSLGLPAMFQMGGQQRSDRPVR 172
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
V L GDV+++GG R FHGV + ++++ R+N T R+
Sbjct: 173 VPLLHGDVMVWGGVDRLRFHGVLPLREGV-------HSVMGAQRINFTLRK 216
>gi|154254007|ref|YP_001414831.1| 2OG-Fe(II) oxygenase [Parvibaculum lavamentivorans DS-1]
gi|154157957|gb|ABS65174.1| 2OG-Fe(II) oxygenase [Parvibaculum lavamentivorans DS-1]
Length = 221
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 17/113 (15%)
Query: 349 PDICIVNFYNTS-GRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
P+ C+VN Y+ R+GLH+D DE PV+S S+GD+ F G +K++
Sbjct: 117 PECCLVNLYDAPKSRMGLHRDEDEEALDA----PVLSLSLGDTCIFRVGGFARGDKSKSF 172
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSA---PGALLENTMLRPGRLNLTFRQ 457
L SGDVL+ GG SR +HGV + S+ PG GR+NLT R+
Sbjct: 173 RLASGDVLVLGGASRLRYHGVDRVISGSSRLIPGG---------GRINLTLRR 216
>gi|254419984|ref|ZP_05033708.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Brevundimonas sp.
BAL3]
gi|196186161|gb|EDX81137.1| oxidoreductase, 2OG-Fe(II) oxygenase family [Brevundimonas sp.
BAL3]
Length = 209
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 17/111 (15%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y ++GLHQD+DE+ G PV+S S+GD+A F G + + +
Sbjct: 106 PDACLVNLYREGAKMGLHQDKDEA----DLGAPVLSVSLGDAAMFRIG-AAEGGRTTTLR 160
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSA---PGALLENTMLRPGRLNLTFR 456
L+SGDV G +R HG+ + S+ PG GRLNLT R
Sbjct: 161 LDSGDVCALTGPARLARHGIDRVLEGSSRLIPGG---------GRLNLTLR 202
>gi|393777206|ref|ZP_10365499.1| alkylated DNA repair protein AlkB [Ralstonia sp. PBA]
gi|392715907|gb|EIZ03488.1| alkylated DNA repair protein AlkB [Ralstonia sp. PBA]
Length = 217
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C+VN Y R+ LHQDR+E + P+VS S+G F +G + + + +V
Sbjct: 118 PDACLVNRYAPGARMSLHQDRNERDMTQ----PIVSVSLGLPVIFQFGGMQRSERPRRVP 173
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GDV+++GG +R +HGV ++ + P L N R+NLTFR+
Sbjct: 174 LMHGDVVVWGGPARLRYHGVLALKDDVHP--LTGNC-----RINLTFRK 215
>gi|335044493|ref|ZP_08537518.1| alkylated DNA repair protein [Methylophaga aminisulfidivorans MP]
gi|333787739|gb|EGL53623.1| alkylated DNA repair protein [Methylophaga aminisulfidivorans MP]
Length = 210
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 80/184 (43%), Gaps = 27/184 (14%)
Query: 273 GYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIK 332
GY GAK+ C L W + Y + +D PS +L + E +L++
Sbjct: 47 GYYVGAKMT---NCGDLGWVSDNKGY-RYTAIDPLTNMPWPS-MPELFESLAEENASLVE 101
Query: 333 MDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAE 392
P+ C++N Y +GLHQD+DE ++ P+VS S+G A
Sbjct: 102 FQH-----------FQPNACLINQYTPGVGMGLHQDKDEKDFTQ----PIVSVSLGVPAI 146
Query: 393 FLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLN 452
F +G + LLE GD++I+GG R FHG+ I L + + R N
Sbjct: 147 FQFGSNKRNETPNYHLLEHGDIVIWGGVDRLRFHGIKPIK-------LAHHPLTGQFRYN 199
Query: 453 LTFR 456
LTFR
Sbjct: 200 LTFR 203
>gi|432936607|ref|XP_004082191.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like
[Oryzias latipes]
Length = 372
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P + I+N+Y LG+H D E L P++SFS G SA FL G R +
Sbjct: 191 FPGFRSEAAILNYYRPDSSLGIHVDESE----LDHTRPLLSFSFGQSAIFLLGGTRRQDP 246
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNS-APGALLENTMLRPG 449
+L+ SGDV++ G+SR ++H V I P GALLE+ LRP
Sbjct: 247 PTAMLVHSGDVMVMSGQSRLLYHAVPRILPTPRGHGALLED--LRPA 291
>gi|409046426|gb|EKM55906.1| hypothetical protein PHACADRAFT_174062 [Phanerochaete carnosa
HHB-10118-sp]
Length = 478
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY TS L H DR E L P+VS S+G +A FL G + +
Sbjct: 343 PDAGIVNFYQTSDTLMAHVDRSE----LCAASPLVSISLGCTAVFLIGGPTRDTEPVPIF 398
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALL 441
L SGDVLI G R +HGV I ++ P LL
Sbjct: 399 LRSGDVLIMSGPCRRAYHGVPRILEDTCPAHLL 431
>gi|357030827|ref|ZP_09092771.1| alkylated DNA repair protein AlkB [Gluconobacter morbifer G707]
gi|356415521|gb|EHH69164.1| alkylated DNA repair protein AlkB [Gluconobacter morbifer G707]
Length = 218
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
P C++N Y ++GLHQD+DE P+VS S+G A F +G + + +
Sbjct: 111 FDPTSCLINRYGPGAKMGLHQDQDED----CPQAPIVSVSLGVPARFAFGGLKRNDPVRQ 166
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
V L GDV+++GG SR +HGVS + P R NLTFR
Sbjct: 167 VDLLHGDVVVWGGASRFAWHGVSPVRETFHP-------QTEAMRYNLTFR 209
>gi|402701962|ref|ZP_10849941.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Pseudomonas fragi
A22]
Length = 218
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD C++N Y ++ LHQD++E SL+ P+VS S+G A F +G ++ A+++
Sbjct: 119 PDACLINCYVPGAKMSLHQDKNER--SLEA--PIVSISLGLPAVFQFGGFERSDPAQRIS 174
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
L GD+ ++GG R +HGV I P P +L R+N+T R+
Sbjct: 175 LFHGDIAVWGGVDRLRYHGVLPIQPGQHP-------VLGEQRINITLRK 216
>gi|94499311|ref|ZP_01305849.1| 2OG-Fe(II) oxygenase superfamily protein [Bermanella marisrubri]
gi|94428943|gb|EAT13915.1| 2OG-Fe(II) oxygenase superfamily protein [Oceanobacter sp. RED65]
Length = 212
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
LP SPD C++N Y+ +G HQD+DE+ + P++S S+G A F + K
Sbjct: 107 LPKYSPDACLINRYDIGTSMGRHQDKDEANFDY----PIISVSLGLPAIFQVVGPKRQGK 162
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
A + GDV I G++R +HGV+++ N L + R NLT R+
Sbjct: 163 ATYYSVSDGDVFILSGQARLYYHGVNTVKANPNQPELQQ-------RYNLTLRR 209
>gi|423697935|ref|ZP_17672425.1| alkylated DNA repair protein AlkB [Pseudomonas fluorescens Q8r1-96]
gi|388005526|gb|EIK66793.1| alkylated DNA repair protein AlkB [Pseudomonas fluorescens Q8r1-96]
Length = 225
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 28/173 (16%)
Query: 286 CLGLDW--DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDI 343
C L W D +Y G +P+ F++L Q + +A+
Sbjct: 76 CGALGWTTDRSGYRYTAHDPQTGHPWPDMPAVFRELAQAAARQAY--------------- 120
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
PD C++N Y R+ LHQD++E + P+VS S+G A F +G ++K
Sbjct: 121 FEHFEPDACLINRYVPGARMSLHQDKNERSLAA----PIVSMSLGLPAVFQFGGFERSDK 176
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ ++ L GD++++GG R +HGV + P L R+NLTFR
Sbjct: 177 SLRIPLFHGDIVVWGGVDRLRYHGVLPLKEGQHP-------RLGTQRINLTFR 222
>gi|378950223|ref|YP_005207711.1| alkB [Pseudomonas fluorescens F113]
gi|359760237|gb|AEV62316.1| AlkB [Pseudomonas fluorescens F113]
Length = 226
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD C++N Y R+ LHQD++E ++ P+VS S+G A F +G ++K+ +
Sbjct: 125 FEPDACLINRYVPGARMSLHQDKNERSFAA----PIVSMSLGLPAVFQFGGFERSDKSLR 180
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+ L GD++++GG R +HGV + P L R+NLTFR
Sbjct: 181 IPLFHGDIVVWGGVDRLRYHGVLPLKEGQHP-------RLGAQRINLTFR 223
>gi|378756529|gb|EHY66553.1| hypothetical protein NERG_00193 [Nematocida sp. 1 ERTm2]
Length = 369
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 16/124 (12%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDE-----SRYSLKKGLPVVSFSVGDSAEFLYGD-ERD 400
+S DIC VNF + + +Q +D RY P++SFS G S F+ G ER+
Sbjct: 244 ISRDICKVNFIPETAVINYYQKKDRIMSHVDRYEEDMSKPLISFSFGASCVFVLGKKERE 303
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLEN-------TMLRPGRLNL 453
+ + LLE GD+ I GESR FHGV I NS G LE+ +++ R+N+
Sbjct: 304 DSSVDTFLLEDGDIAILIGESREYFHGVPKI-LNSNKG--LEDYKKEEFFSLISESRINI 360
Query: 454 TFRQ 457
+ RQ
Sbjct: 361 SVRQ 364
>gi|407411737|gb|EKF33680.1| alkylated DNA repair protein, putative [Trypanosoma cruzi
marinkellei]
Length = 337
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 29/188 (15%)
Query: 282 LRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
+R LG +D ++ Y ++ S F ++R + E ++ + S ++++
Sbjct: 141 MRWATLGFSYDWTSKTYTREHY----------SAFPLALKRRIEE---ILHLCSTTTDLK 187
Query: 342 DILPA-LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
D+ P+ P IVN+++ + HQD E S++ P++S S+G S FL G
Sbjct: 188 DVSPSTYEPQTAIVNYFSVGSMMMAHQDVSEE--SMQH--PLISISLGCSCVFLMGTSSR 243
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP-----------GALLENTMLRPG 449
+ L SGDV IF G SR FH + I +S P + T +R
Sbjct: 244 DDAPSAFWLRSGDVAIFSGPSRVAFHSIPRIMDDSPPHLCTISDENNENEVYWRTRMRHM 303
Query: 450 RLNLTFRQ 457
R+N+ RQ
Sbjct: 304 RININVRQ 311
>gi|328849570|gb|EGF98748.1| hypothetical protein MELLADRAFT_58012 [Melampsora larici-populina
98AG31]
Length = 128
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 55/118 (46%), Gaps = 14/118 (11%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ ++NFY L H D E + P+VS S+G++ FL G RD +
Sbjct: 14 PEAGVINFYQYKDSLTAHVDHSE----VSVDSPLVSLSIGNACVFLIGPNRDETPL-ALR 68
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGAL---------LENTMLRPGRLNLTFRQ 457
LESGD LI GESR FHGV I NS P L + GR+NL RQ
Sbjct: 69 LESGDALIMAGESRRFFHGVPRIIENSLPSWLSQTQEEDVCWTDWFKNGGRINLNVRQ 126
>gi|182678752|ref|YP_001832898.1| 2OG-Fe(II) oxygenase [Beijerinckia indica subsp. indica ATCC 9039]
gi|182634635|gb|ACB95409.1| 2OG-Fe(II) oxygenase [Beijerinckia indica subsp. indica ATCC 9039]
Length = 232
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
PD C++N Y R+ LHQD++E ++ P+VS S+G A F +G + K
Sbjct: 131 FEPDACLINRYEPGSRMSLHQDKNERDFAQ----PIVSVSLGLLATFQFGGATRKDPVRK 186
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRL--NLTFRQ 457
+ L+ DV+++GG SR HGV ++ P GR+ NLTFR+
Sbjct: 187 IFLDHADVVVWGGASRLNHHGVLTLKNGWHPST---------GRVRYNLTFRK 230
>gi|321265255|ref|XP_003197344.1| hypothetical protein CGB_M2030C [Cryptococcus gattii WM276]
gi|317463823|gb|ADV25557.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 427
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 54/120 (45%), Gaps = 13/120 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY + L H DR E R L P+VS S+G +A L G + ++
Sbjct: 300 PDTGIVNFYQLNDTLMAHVDRAEDR--LDPARPLVSVSLGHAAILLLGSDSRDEVPRPII 357
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALL-----------ENTMLRPGRLNLTFRQ 457
L SGD+LI G+ R +HGV I S P L + R+N+ RQ
Sbjct: 358 LRSGDMLIMSGKGRQAYHGVPRILEGSLPSHFLVQESDSEKMKAAKNWISTARININARQ 417
>gi|449435087|ref|XP_004135327.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB-like
[Cucumis sativus]
gi|449529170|ref|XP_004171574.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB-like
[Cucumis sativus]
Length = 363
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 82/193 (42%), Gaps = 41/193 (21%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR LGL +D R Y + IPS QL +R + A
Sbjct: 194 KLRWSTLGLQFDWSKRSYNISLPHNK-----IPSALCQLAKRMAAAA------------- 235
Query: 341 EDILPA---LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD 397
+P P+ IVN++ + LG H D E+ +S P+VS S+G A FL G
Sbjct: 236 ---MPTGEEFKPEAAIVNYFASGDTLGGHLDDMEADWSK----PIVSMSLGCKAIFLLGG 288
Query: 398 ERDANKAEKVLLESGDVLIFGGESRHVFHGVSS--INPNSAPGALLENTM---------- 445
+ + + L SGDV++ GE+R FHGV I+ S + LE +
Sbjct: 289 KSRQDPPIAMFLRSGDVVLMAGEARECFHGVPRIFIDEESEEISFLETHLTNQDDLHCLE 348
Query: 446 -LRPGRLNLTFRQ 457
+R R+N+ RQ
Sbjct: 349 YIRTSRININIRQ 361
>gi|348690292|gb|EGZ30106.1| hypothetical protein PHYSODRAFT_470275 [Phytophthora sojae]
Length = 309
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 63/129 (48%), Gaps = 21/129 (16%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+LS + IVNFY + +G H D E Y++ PVVS S+G FL G
Sbjct: 175 SLSAEAVIVNFYKSKSSMGGHLDDVE--YTMDH--PVVSLSLGSRCVFLMGGHTKDELPL 230
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSI--NPNSAPG----ALLEN-----------TMLRP 448
++LL SGD+ I GGESR +HGV+ + P P ALL++ T L
Sbjct: 231 EILLRSGDIAIMGGESRTCYHGVARVLPTPFDVPSDDFDALLQSEDDREEYEAVRTYLST 290
Query: 449 GRLNLTFRQ 457
R+N+ RQ
Sbjct: 291 QRININVRQ 299
>gi|325187414|emb|CCA21952.1| alkylated DNA repair protein alkBlike protein putati [Albugo
laibachii Nc14]
Length = 376
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 22/129 (17%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
+ P+ I+NFY T +G H+D E PV+S S+G S FL G + +
Sbjct: 188 IIPEAVIINFYTTKSSMGGHRDDVED----TMDAPVISMSLGSSCVFLKGGNTKEVRPLE 243
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNS------APGALLEN------------TMLRP 448
++L+SGDV I ESR +HGV+ I P + A +LLE ++L
Sbjct: 244 IMLQSGDVAILSQESRLSYHGVAQIIPTAFQIDDEAWDSLLEEESDHVQEYMTIRSLLSS 303
Query: 449 GRLNLTFRQ 457
R+N+ RQ
Sbjct: 304 YRININIRQ 312
>gi|392579368|gb|EIW72495.1| hypothetical protein TREMEDRAFT_26898 [Tremella mesenterica DSM
1558]
Length = 463
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 77/188 (40%), Gaps = 20/188 (10%)
Query: 282 LRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSM-SEAHALIKMDSKVSNV 340
LR LG + T+ Y EP P+ QL + S + + DSK +
Sbjct: 233 LRWANLGWVYQWSTKSY----DFTNPEPIPFPTPLAQLCTNIVKSIPWSEVYQDSKDISW 288
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
+ PD IVNFY L H DR E L P+VS S+G S FL G
Sbjct: 289 KSWKEDYVPDTGIVNFYQLKDTLMGHVDRAE----LDPSRPLVSISLGHSTIFLLGSSTR 344
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENT-----------MLRPG 449
++ ++L SGD+LI G R +HGV I + P ++ L+
Sbjct: 345 NDQPIPLILRSGDILIMSGPGRKAYHGVPRIMEGTLPSYFTPSSDDSLSMKTTKEFLQTA 404
Query: 450 RLNLTFRQ 457
R+N+ RQ
Sbjct: 405 RININARQ 412
>gi|297849550|ref|XP_002892656.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
gi|297338498|gb|EFH68915.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
Length = 345
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 80/193 (41%), Gaps = 39/193 (20%)
Query: 279 KLRLRMMCLGLDWDPQTRKYGKKRQVDGCEP-SVIPSEFKQLVQRSMSEAHALIKMDSKV 337
KLR + L DW KR D P + IP QL ++ HA I M
Sbjct: 176 KLRWSTLGLQFDW--------SKRNYDVSLPHNNIPDALCQL-----AKTHAAIAMPDG- 221
Query: 338 SNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD 397
P+ IVN++ LG H D E+ +S P+VS S+G A FL G
Sbjct: 222 -------EEFRPEGAIVNYFGIGDTLGGHLDDMEADWSK----PIVSMSLGCKAIFLLGG 270
Query: 398 ERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI---NPNSAPGAL----------LENT 444
+ + + L SGDV++ GE+R FHGV I N+ GAL
Sbjct: 271 KSKDDPPHAMYLRSGDVVLMAGEARECFHGVPRIFTDEKNAEIGALESELSHESGHFFTE 330
Query: 445 MLRPGRLNLTFRQ 457
++ R+N+ RQ
Sbjct: 331 YIKTSRININIRQ 343
>gi|388581174|gb|EIM21484.1| hypothetical protein WALSEDRAFT_60458 [Wallemia sebi CBS 633.66]
Length = 382
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDE--RDANKAEK 406
PD I+N+YN + L H DR E + LP+VS S+G SA L GD+ N
Sbjct: 252 PDAGIINYYNLNDTLMAHVDRSE----VTATLPLVSISLGHSAILLIGDDIRESINPPTA 307
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGAL 440
++L SGDV++ G +R +HGV I + P L
Sbjct: 308 IVLRSGDVIVMSGPTRRSYHGVPRILERTLPEHL 341
>gi|428178135|gb|EKX47012.1| hypothetical protein GUITHDRAFT_137971 [Guillardia theta CCMP2712]
Length = 315
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 24/175 (13%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+L + LG +D R+Y ++ + +P V+ + LI+M + V
Sbjct: 125 QLSWVTLGYQYDWTARRYPEEEKFP------VPQ-----VRSPSTRTEPLIRMQEICALV 173
Query: 341 EDI-----LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLY 395
+++ + P+ IVN+Y+ S LG H D E + P++S S+G SA FL
Sbjct: 174 DEVSSRMKRKQIVPEAVIVNYYSHSRTLGGHLDDVEP----DQESPIISISLGCSAVFLA 229
Query: 396 GDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI----NPNSAPGALLENTML 446
G + +LL SGDV++ GESR +HGV I N A ALL + ++
Sbjct: 230 GGRTKDEEPIPLLLRSGDVMVMSGESRRCYHGVPRILSWGELNHALNALLMSVLV 284
>gi|357462995|ref|XP_003601779.1| Alkylated DNA repair protein alkB-like protein [Medicago
truncatula]
gi|355490827|gb|AES72030.1| Alkylated DNA repair protein alkB-like protein [Medicago
truncatula]
Length = 359
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 69/151 (45%), Gaps = 22/151 (14%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR LGL +D R Y Q + P + KQL + +M + V
Sbjct: 190 KLRWSTLGLQFDWSNRNYNVSLQHNKI-PEALCELAKQLAKPAMP------------AGV 236
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
E P+ IVN++ + LG H D E+ +S P+VS S+G A FL G +
Sbjct: 237 E-----FHPEAAIVNYFASGDTLGGHLDDMEADWSK----PIVSLSLGCKAIFLLGGKSR 287
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
+ + L SGDV++ GE+R FHGV I
Sbjct: 288 EDAPLAMFLRSGDVVLMAGEARECFHGVPRI 318
>gi|71419500|ref|XP_811187.1| alkylated DNA repair protein [Trypanosoma cruzi strain CL Brener]
gi|70875822|gb|EAN89336.1| alkylated DNA repair protein, putative [Trypanosoma cruzi]
Length = 323
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 29/188 (15%)
Query: 282 LRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
+R LG +D ++ Y ++ S F ++R + E ++ + S +++
Sbjct: 141 MRWATLGFSYDWTSKTYTRENY----------SAFPPALKRRIEE---ILHLCSSTPDLK 187
Query: 342 DILPAL-SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
D+ P++ P IVN+++ + HQD E S++ P++S S+G S FL G
Sbjct: 188 DVNPSIYEPQTAIVNYFSVGSMMMAHQDVSEE--SMQH--PLISISLGCSCVFLMGTSSR 243
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP-----------GALLENTMLRPG 449
+ L SGDV +F G SR FH + I + P + T +R
Sbjct: 244 DDAPYAFWLRSGDVAVFSGPSRVAFHSIPRIMDDCPPHLCTISGENNEDEVYWRTQMRHM 303
Query: 450 RLNLTFRQ 457
R+N+ RQ
Sbjct: 304 RININVRQ 311
>gi|392595675|gb|EIW84998.1| hypothetical protein CONPUDRAFT_117367 [Coniophora puteana
RWD-64-598 SS2]
Length = 425
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY T L H DR E + P+VS S+G++A FL G + +L
Sbjct: 281 PDAGIVNFYQTKDTLMAHVDRSE----VCATSPLVSISIGNAAIFLIGGQTRDEPPVPIL 336
Query: 409 LESGDVLIFGGE-SRHVFHGVSSINPNSAPGALLENTMLRPGRL 451
L SGDV++ G R +HGV I NS P L++ + G +
Sbjct: 337 LHSGDVVMMAGPYCRRAYHGVPRILANSLPRHLVDGPCPQDGNI 380
>gi|327259296|ref|XP_003214474.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like [Anolis
carolinensis]
Length = 370
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 31/141 (21%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P + I+N+Y+ LG+H D E L P++SFS G S+ FL G ++
Sbjct: 192 FPGFQAEAGILNYYHFDSSLGIHVDESE----LDHSQPLLSFSFGQSSIFLLGGQKRDQA 247
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINPN------------SAPGALLENTMLRP--- 448
+ + SGDV+I G SR ++H V + PN P L N++L+P
Sbjct: 248 PVAMFMHSGDVMIMSGFSRLLYHAVPRVLPNMEGKPLPSCMEQPLPADLPANSVLQPCSA 307
Query: 449 ------------GRLNLTFRQ 457
R+N+T RQ
Sbjct: 308 EDWEVCAKYLETSRINMTVRQ 328
>gi|403171030|ref|XP_003330281.2| hypothetical protein PGTG_11618 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169003|gb|EFP85862.2| hypothetical protein PGTG_11618 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 505
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 82/199 (41%), Gaps = 28/199 (14%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSM------SEAHALIKMD 334
+LR +G + T+ Y +R ++ S K L+ R + SE A K
Sbjct: 311 KLRWCTIGWQYHWPTKTYHFERDPTPIS-DLVQSTCKNLINRVVPWDVIESEFQATEKTS 369
Query: 335 S---KVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSA 391
+ K S++ D P+ ++NFY L H D E + P+VS SVG +
Sbjct: 370 NDCEKESSLVDWKTNYKPEAGVINFYQYRDALTAHIDHSE----VTTDTPLVSLSVGQAC 425
Query: 392 EFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP----GALLENTMLR 447
FL R+ + LESGD LI G SR FHGV I +S P G L
Sbjct: 426 IFLIAASREEEPL-AIKLESGDALIMAGPSRRFFHGVPRIIEHSLPPWIDGCLSTGPSPP 484
Query: 448 P---------GRLNLTFRQ 457
P GR+NL RQ
Sbjct: 485 PPWARWFHNGGRINLNVRQ 503
>gi|328716113|ref|XP_003245836.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like
[Acyrthosiphon pisum]
Length = 300
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 87/222 (39%), Gaps = 43/222 (19%)
Query: 229 DWTREGILR-PGMVLLKHYLTIREQILIVRIC----------------QELGKGPGGFYQ 271
DW +L PG++ +K+ T Q ++ C LG G +
Sbjct: 61 DWNCYDVLNVPGLIFIKNPFTSTGQKYWMKRCIVDYTRKPNRLNIDAHHILGDGEDWWTT 120
Query: 272 PGYNDGAKLR--LRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHA 329
N KLR LR LG + T+ Y + + S P +
Sbjct: 121 TNKNGNVKLRDQLRWATLGYHHNWDTKVYSETAK------SKFPMD-------------- 160
Query: 330 LIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGD 389
L K+ + N+ + + IVNFY+ S L H D E S P++S S G
Sbjct: 161 LFKLSKTIINLLEFPDEFKAEAGIVNFYHPSSTLSGHTDHSEYNLSA----PLLSISFGL 216
Query: 390 SAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
SA FL G +K +LL SGDV++ ESR +HGV +
Sbjct: 217 SAIFLIGGRSLDDKPSAILLRSGDVIVMSKESRLFYHGVPKV 258
>gi|46445920|ref|YP_007285.1| alkylated DNA repair protein [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399561|emb|CAF23010.1| probable alkylated DNA repair protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 222
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 11/112 (9%)
Query: 346 ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAE 405
+ P C++N Y ++ LHQD+DE P+VS S+G A F +G + +
Sbjct: 120 SFVPSACLINRYVPGAKMSLHQDKDEDDLDS----PIVSVSLGLPATFQFGGFNRTDPLQ 175
Query: 406 KVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
K+LL GDV+++GG+ R +HG+ + + + R+NLTFR+
Sbjct: 176 KLLLIHGDVVVWGGKLRLAYHGILPLKSG-------HHHLTGSTRINLTFRK 220
>gi|281209952|gb|EFA84120.1| alkylated DNA repair protein [Polysphondylium pallidum PN500]
Length = 780
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
IVNFY+ +G H D E ++K P+VS S G +A FL G E + + S
Sbjct: 264 AIVNFYSEDSVMGGHLDDAEEE--MEK--PIVSISFGSTAVFLMGAETKDVAPVPIFIRS 319
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAPGALLENT 444
GD++I GG SR+ +HGV+ I +S LL+++
Sbjct: 320 GDIVIMGGRSRYCYHGVARIVEDSFDAGLLDDS 352
>gi|328766863|gb|EGF76915.1| hypothetical protein BATDEDRAFT_92196 [Batrachochytrium
dendrobatidis JAM81]
Length = 370
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 77/192 (40%), Gaps = 29/192 (15%)
Query: 276 DGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDS 335
D RLR + LG +D ++Y R P + + ++ L S
Sbjct: 193 DAVIHRLRWVTLGHQYDWTRKQYHFDRL------HAFPDTIATITHQILAFTQELTGYSS 246
Query: 336 KVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLY 395
P+ ++N+Y+ L HQDR E + P+VS SVG S FL
Sbjct: 247 S---------QWRPEAGVINWYHPGDTLMGHQDRSE----VDMTAPLVSLSVGLSCVFLI 293
Query: 396 GD-ERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENT---------M 445
E + L+SGDVLI +R VFHGV + P++ P L+ T
Sbjct: 294 SPCESKDITPTAIRLDSGDVLIMSKSARRVFHGVPLVIPDTCPDYLMHGTDSEWNAFAEW 353
Query: 446 LRPGRLNLTFRQ 457
+ RLN+ RQ
Sbjct: 354 MDHSRLNINVRQ 365
>gi|260837071|ref|XP_002613529.1| hypothetical protein BRAFLDRAFT_119815 [Branchiostoma floridae]
gi|229298914|gb|EEN69538.1| hypothetical protein BRAFLDRAFT_119815 [Branchiostoma floridae]
Length = 365
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 25/151 (16%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR LG +D ++Y ++R + P + QL S A L
Sbjct: 157 KLRWTTLGYHYDWDKKEYQQERYTE------FPPDLSQL---STHVAQTLG--------- 198
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
P IVN+Y +LG H D E YS P++SFS G +A FL G +
Sbjct: 199 ---FPRYRAQSAIVNYYGLDSQLGGHVDHQELDYSK----PIISFSFGQTAVFLLGGKTK 251
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
+ K + L +GD+++ G++R +HGV I
Sbjct: 252 SVKPMAMFLRNGDIMVMSGDTRLAYHGVPKI 282
>gi|15221095|ref|NP_172643.1| alpha-ketoglutarate-dependent dioxygenase alkB [Arabidopsis
thaliana]
gi|209572586|sp|Q9SA98.2|ALKBH_ARATH RecName: Full=Alpha-ketoglutarate-dependent dioxygenase alkB;
AltName: Full=Alkylated DNA repair protein alkB homolog
gi|124301166|gb|ABN04835.1| At1g11780 [Arabidopsis thaliana]
gi|332190663|gb|AEE28784.1| alpha-ketoglutarate-dependent dioxygenase alkB [Arabidopsis
thaliana]
Length = 345
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 80/193 (41%), Gaps = 39/193 (20%)
Query: 279 KLRLRMMCLGLDWDPQTRKYGKKRQVDGCEP-SVIPSEFKQLVQRSMSEAHALIKMDSKV 337
KLR + L DW KR D P + IP QL ++ HA I M
Sbjct: 176 KLRWSTLGLQFDW--------SKRNYDVSLPHNNIPDALCQL-----AKTHAAIAMPDG- 221
Query: 338 SNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD 397
P+ IVN++ LG H D E+ +S P+VS S+G A FL G
Sbjct: 222 -------EEFRPEGAIVNYFGIGDTLGGHLDDMEADWSK----PIVSMSLGCKAIFLLGG 270
Query: 398 ERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI---NPNSAPGAL----------LENT 444
+ + + L SGDV++ GE+R FHG+ I N+ GAL
Sbjct: 271 KSKDDPPHAMYLRSGDVVLMAGEARECFHGIPRIFTGEENADIGALESELSHESGHFFAE 330
Query: 445 MLRPGRLNLTFRQ 457
++ R+N+ RQ
Sbjct: 331 YIKTSRININIRQ 343
>gi|91080539|ref|XP_972787.1| PREDICTED: similar to AlkB CG33250-PA [Tribolium castaneum]
gi|270005533|gb|EFA01981.1| hypothetical protein TcasGA2_TC007602 [Tribolium castaneum]
Length = 297
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 101/217 (46%), Gaps = 43/217 (19%)
Query: 233 EGILRPGMVLLKH-YLTIREQILIVRICQELGKGPGG--------------FYQPGYNDG 277
E + PG++ +K+ + +I ++ +VR Q+ K P +++ N+
Sbjct: 38 ELVDHPGLIFIKNPFTSIGQRYWVVRCLQDYSKRPNKTNLDALNLVPEGKEWWEVCQNNN 97
Query: 278 AKL---RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMD 334
K+ +LR + LG D +++ Y ++ + + P + +L R ++E+ + +
Sbjct: 98 NKILMNKLRWVTLGYHHDWESKVYAEENKGE------FPKDLAEL-SRFIAESLNFLHFN 150
Query: 335 SKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFL 394
++ + IVN+Y+ L H D E ++LK P++S S G +A FL
Sbjct: 151 AEAA--------------IVNYYHMDSTLSGHTDHSE--HNLKA--PLISLSFGQTAIFL 192
Query: 395 YGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
G + ++ + L SGD+++ ESR +HGV I
Sbjct: 193 LGGKTKDDEPSAMFLRSGDIVVMSEESRLCYHGVPKI 229
>gi|219120943|ref|XP_002185703.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582552|gb|ACI65173.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 352
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 271 QPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHAL 330
+P Y KL M DW+ TR Y +K + S +L++R ++E A
Sbjct: 150 RPKYRSFRKLSWATMGYHYDWN--TRSYNEKAK----------SPMPKLLER-IAEIFAA 196
Query: 331 IKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDS 390
+ V+ P + IVNFY +G H RD+ ++L K P+VS S+G
Sbjct: 197 TSL-----LVDGQDPCFTASASIVNFYTPKSMMGGH--RDDLEHALDK--PIVSISLGRP 247
Query: 391 AEFLYG-DERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNS 435
A FL G + +D +L+ GDV++ GG SR +HG++ + P +
Sbjct: 248 AVFLLGGNTKDDQPVVAILVRPGDVMMMGGASRLRYHGMARLLPTT 293
>gi|348539562|ref|XP_003457258.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like
[Oreochromis niloticus]
Length = 378
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 344 LPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANK 403
P + I+N+Y + LG+H D E L P++SFS G SA FL G R +
Sbjct: 194 FPGFISEAGILNYYRSDSSLGIHVDESE----LDHTRPLLSFSFGQSAIFLLGGPRRQDP 249
Query: 404 AEKVLLESGDVLIFGGESRHVFHGVSSINP 433
+L+ SGDV++ G SR ++H V I P
Sbjct: 250 PTAMLMHSGDVMVMSGPSRLLYHAVPRILP 279
>gi|213402777|ref|XP_002172161.1| alkB-like protein [Schizosaccharomyces japonicus yFS275]
gi|212000208|gb|EEB05868.1| alkB-like protein [Schizosaccharomyces japonicus yFS275]
Length = 296
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 350 DICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLL 409
+ IVNFY+ L H D E +L P++S S+G +L G E + + + L
Sbjct: 184 EAAIVNFYSPRDTLSGHVDDAEDDLTL----PLLSMSIGLDCIYLLGTETRKDVPKAIRL 239
Query: 410 ESGDVLIFGGESRHVFHGVSSINPNSAPGAL------LENTMLRPGRLNLTFRQ 457
SGD +I G SR +H V I PN+AP L + N ++ R+N RQ
Sbjct: 240 HSGDAVIMTGLSRKAYHAVPKIIPNTAPSYLQLKDEAVWNQWIQTKRVNFNIRQ 293
>gi|115681547|ref|XP_785154.2| PREDICTED: alkylated DNA repair protein alkB homolog 1-like
[Strongylocentrotus purpuratus]
Length = 488
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 345 PALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKA 404
P IVNFY+ LG H D E P++S+S+G SA L G + A K
Sbjct: 193 PRFQSQAAIVNFYHMDSTLGGHTDHSE----FDLTAPLISYSLGQSAILLVGGKTKATKP 248
Query: 405 EKVLLESGDVLIFGGESRHVFHGVSSI 431
+ L SGDV+I GGESR +H V I
Sbjct: 249 LALHLRSGDVIILGGESRLAYHAVPKI 275
>gi|387594600|gb|EIJ89624.1| hypothetical protein NEQG_00394 [Nematocida parisii ERTm3]
gi|387596553|gb|EIJ94174.1| hypothetical protein NEPG_00841 [Nematocida parisii ERTm1]
Length = 315
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 30/182 (16%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
++R +G+ +D + + Y K ++ P VI Q M + + K+
Sbjct: 154 KIRWSSIGIYYDWEIKAYNK--EITSKIPDVID-------QVCMDISQEICKV------- 197
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYG-DER 399
+ P+ ++N+Y R+ H DR E S P++SFS G S F+ G ER
Sbjct: 198 -----SFIPETAVINYYQKKDRIMSHIDRYEEDMSK----PLISFSFGASCVFVLGTKER 248
Query: 400 DANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLEN----TMLRPGRLNLTF 455
+ + LLE GD+ I G+SR FHGV I + +N +++ R+N++
Sbjct: 249 EDPSVDTFLLEDGDIAILIGDSREYFHGVPKILSLNKGLEDYKNEEFFSLISDSRINISV 308
Query: 456 RQ 457
RQ
Sbjct: 309 RQ 310
>gi|409082374|gb|EKM82732.1| hypothetical protein AGABI1DRAFT_68626 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1282
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 56/125 (44%), Gaps = 19/125 (15%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY L H DR E + P+VS S+G+SA FL G + +L
Sbjct: 228 PDAGIVNFYQEKDTLMAHVDRSE----VCATSPLVSISLGNSAIFLIGGPTRDTEPTPIL 283
Query: 409 LESGDVLIFGGE-SRHVFHGVSSINPNSAPGALLENTM--------------LRPGRLNL 453
L SGDV+I G R +HGV I + P L + +R R+N+
Sbjct: 284 LRSGDVVIMSGPICRRAYHGVPRILEGTLPNHLCREALAGVERESWAAYEDYMRTTRINI 343
Query: 454 TFRQY 458
RQ+
Sbjct: 344 NVRQF 348
>gi|390598656|gb|EIN08054.1| hypothetical protein PUNSTDRAFT_144502 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 440
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 56/124 (45%), Gaps = 19/124 (15%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY T+ L H DR E + P+VS S+G +A FL G + +L
Sbjct: 294 PDAGIVNFYQTNDTLMAHVDRSE----VCATSPLVSISLGCAAIFLIGSATRDDPPTPIL 349
Query: 409 LESGDVLIFGG-ESRHVFHGVSSINPNSAPGALLENTM--------------LRPGRLNL 453
L SGDV+I G R +HGV I S P L T LR R+N+
Sbjct: 350 LRSGDVVIMSGPRCRRAYHGVPRILDASLPAHLSAPTASENEDEEWLPYARYLRTTRINV 409
Query: 454 TFRQ 457
RQ
Sbjct: 410 NVRQ 413
>gi|452846411|gb|EME48343.1| hypothetical protein DOTSEDRAFT_118289 [Dothistroma septosporum
NZE10]
Length = 315
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 35/160 (21%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR LG +D + Y P P F Q ++R V
Sbjct: 151 KLRWTTLGGQYDWTNKIY----------PEGAPPAFPQDIKRL----------------V 184
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
ED+ P + + IVN Y+ L LH+D E + P++S S+G A F+ G E
Sbjct: 185 EDVFP-MKAEAAIVNLYSPGDTLSLHRDVSE-----ECNRPLISISLGCDAIFICGLEPK 238
Query: 401 ANKAEKVL---LESGDVLIFGGESRHVFHGVSSINPNSAP 437
A +V L SGD ++ GESR+ +HGV + P++ P
Sbjct: 239 GGGAPRVATIRLRSGDAVLMSGESRYAWHGVPQVVPDTCP 278
>gi|196005755|ref|XP_002112744.1| hypothetical protein TRIADDRAFT_24904 [Trichoplax adhaerens]
gi|190584785|gb|EDV24854.1| hypothetical protein TRIADDRAFT_24904, partial [Trichoplax
adhaerens]
Length = 271
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 25/151 (16%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR LG +D T++Y R+ S P++ +L +K+
Sbjct: 76 KLRWTTLGYHYDWSTKEYYHNRK------SEFPTDLAEL---------------TKLLAA 114
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
P SP+ I+N+Y L H D E ++ P+ S S G A FL G
Sbjct: 115 TVGFPLFSPEAAIINYYKLDSTLSGHTDHSEFDFTA----PLFSISFGQKAIFLLGGRTT 170
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
+ + +ESGD+ I GESR +H V I
Sbjct: 171 SVTPVAMYIESGDICIMSGESRLAYHAVPRI 201
>gi|392567663|gb|EIW60838.1| hypothetical protein TRAVEDRAFT_36424 [Trametes versicolor
FP-101664 SS1]
Length = 455
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY T L H DR E + P+VS S+G +A FL G + +L
Sbjct: 321 PDAGIVNFYQTKDTLMAHVDRSE----ISATSPLVSISLGCAAVFLIGGLTRDDPPTPIL 376
Query: 409 LESGDVLIFGGES-RHVFHGVSSINPNSAPGAL-------LENTMLRPGRLNLTFRQ 457
L SGDV++ G + R +HGV I + P + + LR R+N+ RQ
Sbjct: 377 LRSGDVVVMSGPACRRAYHGVPRILEGTLPSHMEGGDDWDIYEEYLRATRINVNVRQ 433
>gi|268580271|ref|XP_002645118.1| Hypothetical protein CBG16811 [Caenorhabditis briggsae]
Length = 313
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 34/183 (18%)
Query: 282 LRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
LR LG+++D T+KY + + +P E QL LI K+ +
Sbjct: 155 LRWTTLGVEYDWNTKKYPENGRP-------VPDELFQLGN--------LISNSLKLGD-- 197
Query: 342 DILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDA 401
+ PD I+N+Y L H D+ E + P++S S+G +A +L G +
Sbjct: 198 -----MRPDATILNYYPPKSALSPHVDKSE-----RSNAPLISMSLGQTAVYLSGALSLS 247
Query: 402 NKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAP-------GALLENTMLRPGRLNLT 454
+ L +GD LI GE R V+H + I P P + + + L R+N T
Sbjct: 248 EPPIPLWLSNGDFLIMHGEQRLVYHAIPCIGPKVKPVHFDKDEQSPMISDYLNCSRINFT 307
Query: 455 FRQ 457
RQ
Sbjct: 308 IRQ 310
>gi|224075559|ref|XP_002304683.1| predicted protein [Populus trichocarpa]
gi|222842115|gb|EEE79662.1| predicted protein [Populus trichocarpa]
Length = 353
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 82/188 (43%), Gaps = 33/188 (17%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR LGL +D R Y + IP QL ++ + A + +
Sbjct: 186 KLRWSTLGLQFDWSKRNYNVSLPHNK-----IPDGLCQLAKKLAAPAMPVGE-------- 232
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
P+ IVN++ + LG H D E+ +S P+VS S+G A FL G +
Sbjct: 233 -----EFHPEAAIVNYFASGDTLGGHLDDMEADWSK----PIVSMSLGCKAIFLLGGKSR 283
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSI---NPNSAPGALL-----ENTML---RPG 449
+ + L SGDV++ GE+R FHGV I N+ AL EN +L R
Sbjct: 284 EDPPLAMFLRSGDVVLMAGEARECFHGVPRIFTDKENAEITALELHFCDENDILEYIRTS 343
Query: 450 RLNLTFRQ 457
R+N+ RQ
Sbjct: 344 RININIRQ 351
>gi|405965043|gb|EKC30471.1| Alkylated DNA repair protein alkB-like protein 1 [Crassostrea
gigas]
Length = 378
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 25/158 (15%)
Query: 276 DGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDS 335
D ++LR +G +++ +R Y + ++ + S+ H L + +
Sbjct: 142 DSLIMKLRWATMGYNYEWNSRAY-----------------YDEMKSQFPSDLHKLCRYIA 184
Query: 336 KVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLY 395
+ S + IVN+Y+ SG +G H+D E + P++SFS G A FL
Sbjct: 185 STIGYHN----FSAETAIVNYYHMSGDMGPHKDISE----IDHDAPLLSFSFGQDALFLL 236
Query: 396 GDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINP 433
G A K + L SGDV I G+ R V+H V I P
Sbjct: 237 GGLTKATKPVCLSLHSGDVCIMYGDCRLVYHAVPRILP 274
>gi|45555401|ref|NP_996458.1| AlkB [Drosophila melanogaster]
gi|41616516|tpg|DAA03352.1| TPA_inf: HDC19127 [Drosophila melanogaster]
gi|45446984|gb|AAS65359.1| AlkB [Drosophila melanogaster]
gi|157816744|gb|ABV82365.1| LD02396p [Drosophila melanogaster]
Length = 332
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
P+ IVN+Y L H D E K P+ SFS G +A FL G K
Sbjct: 185 FKPEAAIVNYYPVGSTLSGHTDHSEP----NKSAPLFSFSFGQTAIFLIGGRSLEEKPTA 240
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPNSAPGAL 440
+ L+SGDV+I GESR +H V I A L
Sbjct: 241 IYLQSGDVMIMSGESRLCYHAVPRIIKTQASATL 274
>gi|301093209|ref|XP_002997453.1| alkylated DNA repair protein alkB-like protein [Phytophthora
infestans T30-4]
gi|262110709|gb|EEY68761.1| alkylated DNA repair protein alkB-like protein [Phytophthora
infestans T30-4]
Length = 309
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
L + IVN+Y T +G H D E Y++ PVVS S+G FL G +
Sbjct: 176 LEAEAVIVNYYKTKSSMGGHLDDVE--YTMDH--PVVSLSLGSKCVFLMGGHTKDEAPLE 231
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINPN 434
+LL SGD+ I GG SR +HGV+ + P
Sbjct: 232 ILLRSGDIAIMGGASRTCYHGVARVLPT 259
>gi|156392096|ref|XP_001635885.1| predicted protein [Nematostella vectensis]
gi|156222983|gb|EDO43822.1| predicted protein [Nematostella vectensis]
Length = 323
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
+P+ IVN+Y S +G H D Y L P++S S G SA FL G + K +
Sbjct: 185 TPEAGIVNYYPLSASMGGHTDH----YELDLSWPLISVSFGQSAVFLIGGKTKDVKPTAL 240
Query: 408 LLESGDVLIFGGESRHVFHGVSSI 431
+ SGD+LI GE+R FH V I
Sbjct: 241 YIRSGDILIMSGEARLAFHAVPRI 264
>gi|58262090|ref|XP_568455.1| hypothetical protein CNM01450 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134118397|ref|XP_772212.1| hypothetical protein CNBM1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254820|gb|EAL17565.1| hypothetical protein CNBM1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230628|gb|AAW46938.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 425
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY + L H DR E L P+VS S+G +A L G + ++
Sbjct: 300 PDTGIVNFYQLNDTLMAHVDRAE----LDPARPLVSVSLGHAAILLLGSDSRDEVPRPII 355
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALL-----------ENTMLRPGRLNLTFRQ 457
L SGD+LI G+ R +HGV I S P L + R+N+ RQ
Sbjct: 356 LRSGDMLIMSGKGRQSYHGVPRILEGSLPSHFLVQESDSEEMKAAKNWISTARININARQ 415
>gi|291242901|ref|XP_002741372.1| PREDICTED: alkylated DNA repair protein alkB homolog [Saccoglossus
kowalevskii]
Length = 416
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
IVN+YN S LG H D E P++SFS G +A +L G + + K + + L+SG
Sbjct: 206 IVNYYNMSSTLGGHVDEAE----FDMTAPLISFSFGQTALYLLGGKTRSVKPDAMFLKSG 261
Query: 413 DVLIFGGESRHVFHGVSSINP----NSAPGALLENTMLR 447
D+++ G+SR +H V I P N P + NT L+
Sbjct: 262 DIMLMSGDSRWAYHSVPRILPPRKNNPVPESF--NTTLK 298
>gi|402876842|ref|XP_003902162.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Papio
anubis]
Length = 389
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 31/136 (22%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ I+N+Y LG+H DR E L P++SFS G SA FL G + +
Sbjct: 214 PEAGILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMF 269
Query: 409 LESGDVLIFGGESRHVFHGVSSINPN------------SAPGALLENTMLRP-------- 448
+ SGD++I G SR + H V + PN P L ++M+ P
Sbjct: 270 MHSGDIMIMSGFSRLLNHAVPRVLPNPDGEGLPHCLEAPLPAVLPRDSMIEPCSMEDWQV 329
Query: 449 -------GRLNLTFRQ 457
R+N+T RQ
Sbjct: 330 CASYLKTARVNMTVRQ 345
>gi|302691072|ref|XP_003035215.1| hypothetical protein SCHCODRAFT_14388 [Schizophyllum commune H4-8]
gi|300108911|gb|EFJ00313.1| hypothetical protein SCHCODRAFT_14388 [Schizophyllum commune H4-8]
Length = 424
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY T L H DR E + P+VS S+G++A FL G +L
Sbjct: 297 PDAGIVNFYQTQDTLMGHVDRSE----VCATSPLVSISLGNAAVFLIGSTTRDAAPTPIL 352
Query: 409 LESGDVLIFGGES-RHVFHGVSSINPNSAPGALLEN---------TMLRPGRLNLTFRQ 457
L SGDV+I G + R +HGV I ++ P L N ++ R+N+ RQ
Sbjct: 353 LRSGDVVIMSGPACRRAYHGVPRILEDTLPPHLRRNGDPEWEPFEEYMQTTRVNVNVRQ 411
>gi|389740459|gb|EIM81650.1| hypothetical protein STEHIDRAFT_142212 [Stereum hirsutum FP-91666
SS1]
Length = 477
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY T L H DR E + P+VS S+G++A FL G + VL
Sbjct: 328 PDAGIVNFYQTKDTLMGHVDRSE----VCATSPLVSISLGNAAVFLIGGLTRDVEPVPVL 383
Query: 409 LESGDVLIFGGES-RHVFHGVSSINPNSAP 437
L SGDVLI G + R +HGV I NS P
Sbjct: 384 LRSGDVLIMSGPACRRAYHGVPRILENSLP 413
>gi|356566058|ref|XP_003551252.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB-like
[Glycine max]
Length = 358
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 279 KLRLRMMCLGLDWDPQTRKYGKKRQVDGCEP-SVIPSEFKQLVQRSMSEAHALIKMDSKV 337
KLR + L DW KR D P + IP +L ++ A
Sbjct: 189 KLRWSTLGLQFDW--------SKRNYDVSLPHNKIPEALCELAKQLAKPALP-------- 232
Query: 338 SNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD 397
+ VE P+ IVN++ LG H D E+ +S P+VS S+G A FL G
Sbjct: 233 TGVE-----FRPEAAIVNYFGLGDTLGGHLDDMEADWSK----PIVSLSLGCKAIFLLGG 283
Query: 398 ERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI--NPNSAPGALLENTMLRPGRLNLTF 455
+ + + L+SGDV++ G++R FHGV I + +A LE + R +L F
Sbjct: 284 KSREDTPLAMFLQSGDVVLMAGDARECFHGVPRIFTDKENAEIGHLETQLTRED--DLCF 341
Query: 456 RQY 458
QY
Sbjct: 342 LQY 344
>gi|347833688|emb|CCD49385.1| hypothetical protein [Botryotinia fuckeliana]
Length = 358
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
Query: 332 KMDSKVSN-VEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDS 390
K S ++N VE + P + P IVNFY+ L LH+D E S+ +GL VS S+G
Sbjct: 219 KFPSDIANLVEGLFPDMEPQAAIVNFYSPKDTLQLHRDGAE---SVDRGL--VSISLGCD 273
Query: 391 AEFLYG--DERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTM--- 445
F+ + + N + L SGDVL +SR +HGV I P + P L + +
Sbjct: 274 CIFMIALDNPKSENDHLVLRLRSGDVLYMQEDSRFAWHGVPKIIPGTCPDYLADLELDIK 333
Query: 446 -----LRPGRLNLTFRQ 457
+ R+NL RQ
Sbjct: 334 KFPHFMTDKRINLNVRQ 350
>gi|358055872|dbj|GAA98217.1| hypothetical protein E5Q_04900 [Mixia osmundae IAM 14324]
Length = 480
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDE-RDANKAEKV 407
P IVNFY L H D+ E P+VS S+G SA FL G E RDA
Sbjct: 309 PQTGIVNFYGARDTLTGHIDQSEP----DAVRPLVSISLGTSAVFLAGGETRDARHPLPF 364
Query: 408 LLESGDVLIFGGESRHVFHGVSSI 431
LL SGD ++ G SR VFHG+ +
Sbjct: 365 LLRSGDAIVMSGPSRRVFHGIPRV 388
>gi|154292616|ref|XP_001546879.1| hypothetical protein BC1G_14634 [Botryotinia fuckeliana B05.10]
Length = 351
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
Query: 332 KMDSKVSN-VEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDS 390
K S ++N VE + P + P IVNFY+ L LH+D E S+ +GL VS S+G
Sbjct: 212 KFPSDIANLVEGLFPDMEPQAAIVNFYSPKDTLQLHRDGAE---SVDRGL--VSISLGCD 266
Query: 391 AEFLYG--DERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTM--- 445
F+ + + N + L SGDVL +SR +HGV I P + P L + +
Sbjct: 267 CIFMIALDNPKSENDHLVLRLRSGDVLYMQEDSRFAWHGVPKIIPGTCPDYLADLELDIK 326
Query: 446 -----LRPGRLNLTFRQ 457
+ R+NL RQ
Sbjct: 327 KFPHFMTDKRINLNVRQ 343
>gi|393905643|gb|EFO18292.2| ALKBH protein [Loa loa]
Length = 393
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 134/345 (38%), Gaps = 67/345 (19%)
Query: 140 VSTQLEDSPLSNYVSQHD------DSSPSAPLFNKEMKHAHANASPYKRN----YFKHEL 189
VS +L S ++ Y + D D SPS LF + K YKR+ F L
Sbjct: 80 VSDRLLTSQINKYPTDIDNDGGYRDQSPSDSLFKRTFKF-------YKRHDIAPNFSKVL 132
Query: 190 DAKKWDSSHRL--HNVEPFDICLSRRRNFRMEKENECRQTVDWTREGIL-RPGMVLLKHY 246
+ + S+H + N +P + + +EK R +WT I+ R GM++L
Sbjct: 133 NLRCSSSAHGIICSNFKP----VVAPSDLMLEKLG-LRPLSEWTASTIIHRQGMIMLNDI 187
Query: 247 LTIREQILIVRICQELGKGPGGFYQPGYN--------DGAKLRLRMMCLGLDWDPQTRKY 298
+ ++ + P GF G + + +LR LGL +D T+ Y
Sbjct: 188 FKSVSHLQWIKRSLFVYAEPPGFTNVGLHVPNVQNVFKEYRRQLRWSTLGLHYDWATKTY 247
Query: 299 GKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYN 358
E +P E L+ + +S I P + D I+NFY+
Sbjct: 248 P-------FEGESLPEE--------------LVLLSDVLSQALGIGP-MYADAAIINFYS 285
Query: 359 TSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFG 418
L H DR E K P++S S G +A +L G + + + SGDVLI
Sbjct: 286 RKSTLAPHVDRSER----KLVSPLISLSFGQTAIYLAGGNDLDDPVDAFYIRSGDVLIVY 341
Query: 419 GESRHVFHGVSSI------NPNSAPGALLENTMLRPGRLNLTFRQ 457
G R ++H V I P +++ R+N+T RQ
Sbjct: 342 GSQRLIYHAVPRILQDKQFEDKDQPEEIVKYA--NKNRVNITLRQ 384
>gi|440798016|gb|ELR19090.1| alkylated DNA repair protein AlkB [Acanthamoeba castellanii str.
Neff]
Length = 279
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
IVN+Y L H D E + P+VS S+G SA FL G K +LL SG
Sbjct: 144 IVNYYAPETVLCGHLDDVELTFEA----PIVSISLGLSAIFLLGGRTREEKPRAMLLRSG 199
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGAL 440
DV++ GG SR ++HGV I P + P L
Sbjct: 200 DVVVMGGASRLLYHGVPRILPATLPPEL 227
>gi|426200208|gb|EKV50132.1| hypothetical protein AGABI2DRAFT_183265 [Agaricus bisporus var.
bisporus H97]
Length = 1244
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 55/124 (44%), Gaps = 19/124 (15%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY L H DR E + P+VS S+G+SA FL G + +L
Sbjct: 225 PDAGIVNFYQEKDTLMAHVDRSE----VCATSPLVSISLGNSAIFLIGGPTRDTEPTPIL 280
Query: 409 LESGDVLIFGGE-SRHVFHGVSSINPNSAPGALLENTM--------------LRPGRLNL 453
L SGDV+I G R +HGV I + P L + +R R+N+
Sbjct: 281 LRSGDVVIMSGPICRRAYHGVPRILEGTLPNHLCREALAGVERESWAAYEDYMRTTRINI 340
Query: 454 TFRQ 457
RQ
Sbjct: 341 NVRQ 344
>gi|388517699|gb|AFK46911.1| unknown [Lotus japonicus]
Length = 365
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 344 LPA---LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
LPA P+ IVN++ + LG H D E+ +S P+VS S+G A FL G +
Sbjct: 238 LPAGVEFRPEAAIVNYFTSGDTLGGHLDDMEADWSK----PIVSLSLGCKAIFLLGGKSK 293
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
+ + L SGDV++ GE+R FHGV I
Sbjct: 294 EDLPLAMFLRSGDVVLMAGEARECFHGVPRI 324
>gi|308459852|ref|XP_003092238.1| hypothetical protein CRE_14334 [Caenorhabditis remanei]
gi|308253966|gb|EFO97918.1| hypothetical protein CRE_14334 [Caenorhabditis remanei]
Length = 349
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 36/185 (19%)
Query: 282 LRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
LR LG+++D T++Y + +P E QL LI K+ +
Sbjct: 189 LRWTTLGVEYDWNTKQYPPNGRP-------VPEELYQL--------GNLISNSLKLGD-- 231
Query: 342 DILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDA 401
+ PD I+N+Y L H D+ E + P++S S+G SA +L G +
Sbjct: 232 -----MRPDATILNYYPPKSALSPHVDKSE-----RSNAPLISMSLGQSAVYLSGALTLS 281
Query: 402 NKAEKVLLESGDVLIFGGESRHVFHGVSSINP-----NSAPGALLENTM----LRPGRLN 452
+ L +GD L+ GE R V+H + I P N + E++M L R+N
Sbjct: 282 EPPIPLWLRNGDFLVMHGEQRLVYHAIPCIGPKIEKQNFETNGVEEDSMIVDYLNCSRIN 341
Query: 453 LTFRQ 457
T RQ
Sbjct: 342 FTIRQ 346
>gi|405123605|gb|AFR98369.1| hypothetical protein CNAG_06143 [Cryptococcus neoformans var.
grubii H99]
Length = 425
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY + L H DR E L P+VS S+G +A L G + ++
Sbjct: 300 PDTGIVNFYQLNDTLMAHVDRAE----LDPARPLVSVSLGHAAILLLGSDSRDEVPRPII 355
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAP 437
L SGD+LI G+ R +HG+ I S P
Sbjct: 356 LRSGDMLIMSGKGRQSYHGIPRILEGSLP 384
>gi|410930518|ref|XP_003978645.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like
[Takifugu rubripes]
Length = 373
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
RLR + LG ++ T+ Y + P E L+ R ++ A
Sbjct: 149 RLRWVTLGYHYNWDTKAYSADHH------TPFPPEL-HLLSRHIAAACGF---------- 191
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
P SP+ I+N+Y++ LG+H D E L P++S S G SA FL G
Sbjct: 192 ----PKFSPEAGILNYYHSDSSLGIHVDESE----LDHSHPLLSLSFGQSAIFLLGGLCR 243
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
+ + + SGDV++ G+SR +H V I
Sbjct: 244 QDPPTAMYMRSGDVMVMSGQSRLRYHAVPRI 274
>gi|302829380|ref|XP_002946257.1| hypothetical protein VOLCADRAFT_115825 [Volvox carteri f.
nagariensis]
gi|300269072|gb|EFJ53252.1| hypothetical protein VOLCADRAFT_115825 [Volvox carteri f.
nagariensis]
Length = 365
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 70/162 (43%), Gaps = 31/162 (19%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIK-MDSKVSN 339
+LR LG +D R+Y +F+ + +R AL K + + V
Sbjct: 157 KLRWATLGPQFDWTQRQY----------------DFESVYRRLPPSLEALAKQLAAVVDG 200
Query: 340 VED----ILPALS------PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGD 389
+E +LPA + PD IVN+Y LG H D E + P+VS S+G
Sbjct: 201 LEGAGLRVLPAAAACGGYRPDAAIVNYYQQGDVLGGHLDDVERDMAQ----PIVSVSLGC 256
Query: 390 SAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
A FL G +LL GDVL+ G++R +HGV I
Sbjct: 257 PAIFLMGGRTKHVAPSALLLRGGDVLVLAGDARTCYHGVPRI 298
>gi|147833916|emb|CAN72697.1| hypothetical protein VITISV_011566 [Vitis vinifera]
Length = 366
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 35/190 (18%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR LGL +D R Y + P + K++ +MS+
Sbjct: 197 KLRWSTLGLQFDWSKRNYNVSLPHNKI-PDALCDLAKEMAAPAMSKGKVF---------- 245
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
P+ IVN++ LG H D E+ ++ P+VS S+G A FL G +
Sbjct: 246 -------QPEAAIVNYFGLGDMLGGHLDDMEADWTK----PIVSMSLGCKAIFLLGGKSR 294
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSI-----NPNSAPGALLEN--------TMLR 447
+ + + SGDV++ GE+R FHGV I N AP L+ + +R
Sbjct: 295 DDPPLAMFVRSGDVVLMAGEARECFHGVPRIFTDQENAEIAPLELMFSHEDDVCFLEYIR 354
Query: 448 PGRLNLTFRQ 457
R+N+ RQ
Sbjct: 355 SSRININIRQ 364
>gi|66472360|ref|NP_001018527.1| alkylated DNA repair protein alkB homolog 1 [Danio rerio]
gi|63102531|gb|AAH95784.1| Zgc:112365 [Danio rerio]
gi|182890576|gb|AAI64762.1| Zgc:112365 [Danio rerio]
Length = 363
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR + LG +D ++ Y + + P E + L + ++ A D++
Sbjct: 148 KLRWVTLGYHYDWNSKTYSPEHY------TPFPKELQSLSHK-VAAACGFSGFDAEAG-- 198
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
I+N+Y + LG+H D E L P++S+S G +A FL G +
Sbjct: 199 ------------ILNYYRSDSSLGIHVDESE----LDHTRPLLSYSFGQTAVFLLGGTKR 242
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGAL 440
++ + + SGD+++ G SR +H V I P+ A L
Sbjct: 243 EDRPTALFMHSGDIMVMSGPSRLHYHAVPCIVPSPAGNVL 282
>gi|225425416|ref|XP_002277768.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB [Vitis
vinifera]
gi|297738457|emb|CBI27658.3| unnamed protein product [Vitis vinifera]
Length = 360
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 35/190 (18%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR LGL +D R Y + P + K++ +MS+
Sbjct: 191 KLRWSTLGLQFDWSKRNYNVSLPHNKI-PDALCDLAKEMAAPAMSKGKVF---------- 239
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
P+ IVN++ LG H D E+ ++ P+VS S+G A FL G +
Sbjct: 240 -------QPEAAIVNYFGLGDMLGGHLDDMEADWTK----PIVSMSLGCKAIFLLGGKSR 288
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSI-----NPNSAPGALLEN--------TMLR 447
+ + + SGDV++ GE+R FHGV I N AP L+ + +R
Sbjct: 289 DDPPLAMFVRSGDVVLMAGEARECFHGVPRIFTDQENAEIAPLELMFSHEDDVCFLEYIR 348
Query: 448 PGRLNLTFRQ 457
R+N+ RQ
Sbjct: 349 SSRININIRQ 358
>gi|403420522|emb|CCM07222.1| predicted protein [Fibroporia radiculosa]
Length = 454
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 55/119 (46%), Gaps = 14/119 (11%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY T L H DR E + P+VS S+G +A FL G + +L
Sbjct: 313 PDAGIVNFYQTKDTLMAHVDRSE----VCATSPLVSISLGCAAIFLIGGLTRDVEPTAIL 368
Query: 409 LESGDVLIFGGES-RHVFHGVSSINPNSAP---------GALLENTMLRPGRLNLTFRQ 457
L SGDV+I G + R +HGV I + P G L L R+N+ RQ
Sbjct: 369 LRSGDVVIMSGPACRRAYHGVPRILEGTLPPHLEAGVDAGWQLYEEYLHSARINVNVRQ 427
>gi|170088294|ref|XP_001875370.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650570|gb|EDR14811.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 428
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY T L H DR E + P+VS S+G++A FL G ++ +L
Sbjct: 299 PDAGIVNFYQTKDTLMAHVDRSE----VCATSPLVSISLGNAAIFLVGGLTRDSEPVPIL 354
Query: 409 LESGDVLIFGGES-RHVFHGVSSINPNSAPGAL 440
L SGDV+I G + R +HGV I + P L
Sbjct: 355 LRSGDVIIMSGPTCRRAYHGVPRILEETLPPHL 387
>gi|403264787|ref|XP_003924654.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Saimiri
boliviensis boliviensis]
Length = 389
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y+ LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYHLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPNSA------------PGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++M+ P
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMIEPCSVEDWQVCASY 333
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 334 LKTARVNMTVRQ 345
>gi|453089301|gb|EMF17341.1| hypothetical protein SEPMUDRAFT_130108 [Mycosphaerella populorum
SO2202]
Length = 341
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 47/190 (24%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR + LG +D + Y + +P PS+ K L+
Sbjct: 183 KLRWVTLGGQYDWTNKVYPRG------QPPAFPSDLKNLI-------------------- 216
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
E + P ++ + I+N Y+ L LH+D E + P+VS S+G SA F+ G E
Sbjct: 217 ESVFP-MNAEAAILNLYSPGDTLSLHRDVSE-----ECDQPLVSISIGCSAVFIVGLED- 269
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGAL-----LENT--------MLR 447
++ +LL SGD ++ G SR+ +HGV + + P + ENT +
Sbjct: 270 -HEPAAILLRSGDAVLMSGASRYAWHGVPKVLRETCPAGIAGWPATENTPQYEQWRGWMA 328
Query: 448 PGRLNLTFRQ 457
R+NL RQ
Sbjct: 329 GKRINLNVRQ 338
>gi|218185752|gb|EEC68179.1| hypothetical protein OsI_36130 [Oryza sativa Indica Group]
Length = 790
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
P+ IVN+Y S LG H D E+ +S P+VS S+G FL G +
Sbjct: 669 FKPEAAIVNYYGPSDMLGGHVDDMEADWSK----PIVSISLGCKCIFLLGGKTRDEVPTA 724
Query: 407 VLLESGDVLIFGGESRHVFHGVSSI 431
+ L SGD+++ GE+R FHGV I
Sbjct: 725 MFLRSGDIVLMAGEARECFHGVPRI 749
>gi|1237210|emb|CAA63047.1| alkB homolog protein [Homo sapiens]
gi|1588535|prf||2208455A ABH gene
Length = 299
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 143 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPPPMFMHSG 198
Query: 413 DVLIFGGESRHVFHGVSSINPNSA------------PGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++M+ P
Sbjct: 199 DIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMVEPCSMEDWQVCASY 258
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 259 LKTARVNMTVRQ 270
>gi|297298350|ref|XP_002805207.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like [Macaca
mulatta]
Length = 555
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 384 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 439
Query: 413 DVLIFGGESRHVFHGVSSINPN------------SAPGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++M+ P
Sbjct: 440 DIMIMSGFSRLLNHAVPRVLPNPDGEGLPHCLEAPLPAVLPRDSMIEPCSMEDWQVCASY 499
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 500 LKTARVNMTVRQ 511
>gi|313222823|emb|CBY41773.1| unnamed protein product [Oikopleura dioica]
Length = 248
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 76/191 (39%), Gaps = 38/191 (19%)
Query: 282 LRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
LR LG + +R+YG + G +P K L Q ++S
Sbjct: 79 LRWTTLGYHHNWDSREYGSEVGSRG----TVPELLKTLAQ--------------EISKSF 120
Query: 342 DILPALSPDICIVNFYNTS-GRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
I P L+ + I N+Y + G +G+H D E Y P+VS S+G A FL G
Sbjct: 121 QITPVLNAEASICNYYPANIGTIGIHSDDSEYCYH-----PIVSVSLGLPAVFLLGQGTR 175
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLEN--------------TML 446
+ ++LLE GD+ I G+ R H V + + EN L
Sbjct: 176 DDPCHEILLEHGDIFIMDGKDRQALHAVPRVLDLDRALKIDENYEKKITAVEDKIVYEYL 235
Query: 447 RPGRLNLTFRQ 457
+ R+NL RQ
Sbjct: 236 KQSRINLNIRQ 246
>gi|425472313|ref|ZP_18851164.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Microcystis
aeruginosa PCC 9701]
gi|389881640|emb|CCI37830.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Microcystis
aeruginosa PCC 9701]
Length = 193
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 80/215 (37%), Gaps = 36/215 (16%)
Query: 247 LTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--DPQTRKYGKKRQ 303
LT Q ++R Q L + P GAK +M C G W D +Y
Sbjct: 9 LTKTAQHTLIREIQTLVLPESPLFTPTMKSGAKFHYQMTCCGETGWISDTLGYRYTTLHP 68
Query: 304 VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPA-LSPDICIVNFYNTSGR 362
+ G + + L+ ++ +PA C++N Y +
Sbjct: 69 ITGKPWASLTPSLLTLID---------------YLKLQGYIPANYQAQTCLINKYLPGNK 113
Query: 363 LGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESR 422
LGLHQD E + P++S S+G S F G + E++ L+ GD+ I G + R
Sbjct: 114 LGLHQDNSERNLTA----PIISISLGASGIFQLGGLNRHDPIEEITLQPGDIFIMGEDDR 169
Query: 423 HVFHGVSSINPNSAPGALLENTMLRPGRLNLTFRQ 457
FHG I R+NLT RQ
Sbjct: 170 LRFHGFKGILNGKK-------------RVNLTIRQ 191
>gi|378731086|gb|EHY57545.1| alkylated DNA repair protein alkB 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 356
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 25/138 (18%)
Query: 338 SNVEDILPALSPDIC----IVNFYNTSGRLGLHQD-RDESRYSLKKGLPVVSFSVGDSAE 392
S++ +L L P++C IVN Y L +H+D +E SL VS S+G A
Sbjct: 220 SDIGALLRGLFPEVCAQAAIVNLYTPGDTLSVHRDVSEECDRSL------VSISIGCDAI 273
Query: 393 FLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLENTMLRPG--- 449
F+ G+E D +++ + L SGD ++ G SR+ +H V I P++ P L + + G
Sbjct: 274 FIAGNE-DGSRSTSLRLRSGDAILMSGSSRYAWHAVPKILPDTCPAWLKDWPDIPEGSQW 332
Query: 450 ----------RLNLTFRQ 457
R+NL RQ
Sbjct: 333 REWHGWMAKKRINLNVRQ 350
>gi|4835778|gb|AAD30244.1|AC007296_5 F25C20.6 [Arabidopsis thaliana]
Length = 354
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 65/150 (43%), Gaps = 26/150 (17%)
Query: 279 KLRLRMMCLGLDWDPQTRKYGKKRQVDGCEP-SVIPSEFKQLVQRSMSEAHALIKMDSKV 337
KLR + L DW KR D P + IP QL ++ HA I M
Sbjct: 176 KLRWSTLGLQFDW--------SKRNYDVSLPHNNIPDALCQL-----AKTHAAIAMPDG- 221
Query: 338 SNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD 397
P+ IVN++ LG H D E+ +S P+VS S+G A FL G
Sbjct: 222 -------EEFRPEGAIVNYFGIGDTLGGHLDDMEADWSK----PIVSMSLGCKAIFLLGG 270
Query: 398 ERDANKAEKVLLESGDVLIFGGESRHVFHG 427
+ + + L SGDV++ GE+R FHG
Sbjct: 271 KSKDDPPHAMYLRSGDVVLMAGEARECFHG 300
>gi|398868715|ref|ZP_10624109.1| hypothetical protein PMI35_06067 [Pseudomonas sp. GM78]
gi|398232530|gb|EJN18489.1| hypothetical protein PMI35_06067 [Pseudomonas sp. GM78]
Length = 86
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
Query: 363 LGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESR 422
+ LHQD+DE Y+ P+VS S+G A FL+G ++K+++V L GD++++GG R
Sbjct: 1 MSLHQDKDEKSYAA----PIVSVSLGLPALFLFGGFTRSDKSQRVPLLHGDIVVWGGVDR 56
Query: 423 HVFHGVSSINPNSAPGALLENTMLRPGRLNLTFR 456
+HGV I P L R+N TFR
Sbjct: 57 LRYHGVLPIKDGQHP-------RLGEQRINFTFR 83
>gi|402216759|gb|EJT96843.1| hypothetical protein DACRYDRAFT_97473 [Dacryopinax sp. DJM-731 SS1]
Length = 428
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 348 SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKV 407
+PD IVNFY+ S L H D E L P+VS S+G + FL G + V
Sbjct: 296 TPDAGIVNFYSLSDTLMAHIDHSE----LDATRPLVSLSLGHACVFLIGGPTRETEPRAV 351
Query: 408 LLESGDVLIFGGESRHVFHGVSSINPNSAPGALLEN 443
LL SGD L+ G R +HGV + + P + ++
Sbjct: 352 LLRSGDALLMSGPCRRWYHGVPRVLEGTLPKWMWDD 387
>gi|406860879|gb|EKD13936.1| amidase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 955
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 35/166 (21%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR M LG +D +KY ++ P P + L+++
Sbjct: 198 KLRWMTLGGQYDWTKKKYPEE------SPPHFPPDIAALIRK------------------ 233
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYG---- 396
+ P + P+ IVN Y+ LG+H+D E + +GL VS S+G A F+ G
Sbjct: 234 --LFPDMKPEAAIVNIYSPGDTLGMHRDVSEE---VDEGL--VSISIGCDAVFIIGLCDH 286
Query: 397 DERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLE 442
D E + L SGD + G SR +HGV ++ + PG L E
Sbjct: 287 DSGLEVHYEVLRLRSGDAVYMTGRSRLAWHGVPTVVSGTCPGYLEE 332
>gi|293332709|ref|NP_001168927.1| uncharacterized protein LOC100382739 [Zea mays]
gi|223973785|gb|ACN31080.1| unknown [Zea mays]
gi|413920823|gb|AFW60755.1| hypothetical protein ZEAMMB73_863004 [Zea mays]
Length = 389
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR LGL +D R K + E P +LV+R+ + K+ ++++
Sbjct: 197 KLRWSTLGLQFDWSKRTIRSKSPRNSQEK---PLSSSRLVERNYDVSLPHNKIPGALASL 253
Query: 341 ED--ILPAL------SPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAE 392
+PA+ P+ IVN+Y S LG H D E+ ++ P+VS S+G
Sbjct: 254 AKKMAIPAMPSGEEFKPEAAIVNYYGPSDMLGGHVDDMEADWTK----PIVSISLGCKCI 309
Query: 393 FLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
FL G + + L SGD+++ GE+R FHGV I
Sbjct: 310 FLLGGKTRDEVPTAMFLRSGDIVLMAGEARERFHGVPRI 348
>gi|296215619|ref|XP_002754205.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Callithrix
jacchus]
Length = 389
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPNSA------------PGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++M+ P
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMIEPCSVEDWQVCASY 333
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 334 LKTARVNITVRQ 345
>gi|297695621|ref|XP_002825034.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Pongo
abelii]
Length = 389
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPNSA------------PGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++M+ P
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMIEPCSMEDWQVCASY 333
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 334 LKTARVNMTVRQ 345
>gi|343172808|gb|AEL99107.1| alpha-ketoglutarate-dependent dioxygenase alkB, partial [Silene
latifolia]
Length = 354
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 22/151 (14%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR LGL +D R Y VD + IP + QL ++ A L
Sbjct: 185 KLRWSTLGLQFDWSQRNY----NVDLLH-NKIPDKLCQLAKKLAVPAMPLGD-------- 231
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
P+ IVN++ + LG H D E +S P+VS S+G FL G +
Sbjct: 232 -----NFKPEAAIVNYFASGDTLGGHLDDMELDWSK----PIVSMSLGCKGIFLLGGKSR 282
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
++ + L SGDV++ GE+R FHGV I
Sbjct: 283 EDEPLAMFLRSGDVVLMAGEARECFHGVPRI 313
>gi|332222939|ref|XP_003260626.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Nomascus
leucogenys]
Length = 344
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 173 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 228
Query: 413 DVLIFGGESRHVFHGVSSINPNSA------------PGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++M+ P
Sbjct: 229 DIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMIEPCSMEDWQVCASY 288
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 289 LKTARVNMTVRQ 300
>gi|355693477|gb|EHH28080.1| hypothetical protein EGK_18423 [Macaca mulatta]
gi|355778768|gb|EHH63804.1| hypothetical protein EGM_16845 [Macaca fascicularis]
gi|383422509|gb|AFH34468.1| alkylated DNA repair protein alkB homolog 1 [Macaca mulatta]
Length = 389
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPN------------SAPGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++M+ P
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPNPDGEGLPHCLEAPLPAVLPRDSMIEPCSMEDWQVCASY 333
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 334 LKTARVNMTVRQ 345
>gi|195479028|ref|XP_002100738.1| GE16011 [Drosophila yakuba]
gi|194188262|gb|EDX01846.1| GE16011 [Drosophila yakuba]
Length = 332
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
P+ IVN+Y L H D E K P+ SFS G +A FL G K
Sbjct: 185 FKPEAAIVNYYPVGSTLSGHTDHSEP----NKSAPLFSFSFGQTAIFLIGGRTLEEKPTA 240
Query: 407 VLLESGDVLIFGGESRHVFHGVSSI 431
+ L+ GDV+I GESR +H V I
Sbjct: 241 IYLQCGDVMIMSGESRLCYHAVPRI 265
>gi|380795791|gb|AFE69771.1| alkylated DNA repair protein alkB homolog 1, partial [Macaca
mulatta]
Length = 371
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 200 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 255
Query: 413 DVLIFGGESRHVFHGVSSINPN------------SAPGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++M+ P
Sbjct: 256 DIMIMSGFSRLLNHAVPRVLPNPDGEGLPHCLEAPLPAVLPRDSMIEPCSMEDWQVCASY 315
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 316 LKTARVNMTVRQ 327
>gi|19343600|gb|AAH25787.1| AlkB, alkylation repair homolog 1 (E. coli) [Homo sapiens]
gi|124126775|gb|ABM92160.1| alkB, alkylation repair homolog 1 (E. coli) [synthetic construct]
Length = 389
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPNSA------------PGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++M+ P
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMVEPCSMEDWQVCASY 333
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 334 LKTARVNMTVRQ 345
>gi|61364608|gb|AAX42572.1| alkB alkylation repair-like [synthetic construct]
Length = 389
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPNSA------------PGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++M+ P
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMVEPCSMEDWQVCASY 333
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 334 LKTARVNMTVRQ 345
>gi|261199670|ref|XP_002626236.1| oxidoreductase [Ajellomyces dermatitidis SLH14081]
gi|239594444|gb|EEQ77025.1| oxidoreductase [Ajellomyces dermatitidis SLH14081]
Length = 353
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 66/162 (40%), Gaps = 32/162 (19%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR + LG G+ D P+ IP +F + + S +
Sbjct: 194 KLRWITLG----------GQYNWTDKVYPAEIPPQFPEDI----------------ASLL 227
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
+I P P+ IVN Y+ L +H+D E GL +S S G FL G E D
Sbjct: 228 RNIFPDTKPEAAIVNLYSPGDTLSVHRDVSEE---CDTGL--ISISFGCDGLFLVGHE-D 281
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLE 442
E + L SGD + G SR +H V I P++ P L +
Sbjct: 282 GTGCEVIRLRSGDAVYMTGRSRFAWHAVPKIIPSTCPEWLAD 323
>gi|60810576|gb|AAX36149.1| alkB, alkylation repair-like [synthetic construct]
Length = 390
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPNSA------------PGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++M+ P
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMVEPCSMEDWQVCASY 333
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 334 LKTARVNMTVRQ 345
>gi|397474972|ref|XP_003808929.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Pan
paniscus]
Length = 389
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPNSA------------PGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++M+ P
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMVEPCSMEDWQVCASY 333
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 334 LKTARVNMTVRQ 345
>gi|52632413|gb|AAH15024.1| ALKBH1 protein [Homo sapiens]
Length = 380
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 209 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 264
Query: 413 DVLIFGGESRHVFHGVSSINPNSA------------PGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++M+ P
Sbjct: 265 DIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMVEPCSLEDWQVCASY 324
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 325 LKTARVNMTVRQ 336
>gi|398399152|ref|XP_003853033.1| hypothetical protein MYCGRDRAFT_99953 [Zymoseptoria tritici IPO323]
gi|339472915|gb|EGP88009.1| hypothetical protein MYCGRDRAFT_99953 [Zymoseptoria tritici IPO323]
Length = 310
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 340 VEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYG--D 397
VEDI P + + IVN Y+ L LH+D E + P+ S S+G A F+ G D
Sbjct: 177 VEDIFP-MKAEAAIVNLYSPGDTLSLHRDVSE-----ECNRPLASVSLGCDAIFMAGLDD 230
Query: 398 ERDANKAEKVL--LESGDVLIFGGESRHVFHGVSSINPNSAPGALLE 442
E + K++ + L SGD ++ GESR+ +HGV + ++ PG + +
Sbjct: 231 EAEDGKSKVAVMRLRSGDAVLMSGESRYAWHGVPKVLEDTCPGWMAD 277
>gi|307202053|gb|EFN81599.1| Alkylated DNA repair protein alkB-like protein 1 [Harpegnathos
saltator]
Length = 308
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
IVN+Y + L H D+ E + P+ S S G +A FL G R + A+ + L S
Sbjct: 178 AIVNYYRMNSTLAGHTDQSE----VNIAAPLFSMSFGQTAIFLIGGSRQEDPADAMFLRS 233
Query: 412 GDVLIFGGESRHVFHGVSSINPNSAP 437
GDV+I G SR +HG+ I S P
Sbjct: 234 GDVVIMSGSSRLRYHGIPKILAASEP 259
>gi|239615607|gb|EEQ92594.1| oxidoreductase [Ajellomyces dermatitidis ER-3]
gi|327354229|gb|EGE83086.1| oxidoreductase [Ajellomyces dermatitidis ATCC 18188]
Length = 353
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 66/162 (40%), Gaps = 32/162 (19%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR + LG G+ D P+ IP +F + + S +
Sbjct: 194 KLRWITLG----------GQYNWTDKVYPAEIPPQFPEDI----------------ASLL 227
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
+I P P+ IVN Y+ L +H+D E GL +S S G FL G E D
Sbjct: 228 RNIFPDTKPEAAIVNLYSPGDTLSVHRDVSEE---CDTGL--ISISFGCDGLFLVGHE-D 281
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLE 442
E + L SGD + G SR +H V I P++ P L +
Sbjct: 282 GTGCEVIRLRSGDAVYMTGRSRFAWHAVPKIIPSTCPEWLAD 323
>gi|87298840|ref|NP_006011.2| alkylated DNA repair protein alkB homolog 1 [Homo sapiens]
gi|12643239|sp|Q13686.2|ALKB1_HUMAN RecName: Full=Alkylated DNA repair protein alkB homolog 1; AltName:
Full=Alpha-ketoglutarate-dependent dioxygenase ABH1;
AltName: Full=DNA lyase ABH1; AltName: Full=DNA
oxidative demethylase ALKBH1
gi|6015189|gb|AAF01478.1|AC008044_1 ABH [Homo sapiens]
gi|119601706|gb|EAW81300.1| alkB, alkylation repair homolog 1 (E. coli), isoform CRA_a [Homo
sapiens]
Length = 389
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPNSA------------PGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++M+ P
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMVEPCSMEDWQVCASY 333
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 334 LKTARVNMTVRQ 345
>gi|195355455|ref|XP_002044207.1| GM22517 [Drosophila sechellia]
gi|194129496|gb|EDW51539.1| GM22517 [Drosophila sechellia]
Length = 332
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
P+ IVN+Y L H D E K P+ SFS G +A FL G K
Sbjct: 185 FKPEAAIVNYYPVGSTLSGHTDHSEP----NKSAPLFSFSFGQTAIFLIGGRSLEEKPTA 240
Query: 407 VLLESGDVLIFGGESRHVFHGVSSI 431
+ L+ GDV+I GESR +H V I
Sbjct: 241 IYLQCGDVMIMSGESRLCYHAVPRI 265
>gi|114654177|ref|XP_510096.2| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Pan
troglodytes]
gi|410208596|gb|JAA01517.1| alkB, alkylation repair homolog 1 [Pan troglodytes]
Length = 389
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPNSA------------PGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++M+ P
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMVEPCSMEDWQVCASY 333
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 334 LKTARVNMTVRQ 345
>gi|426377631|ref|XP_004055565.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Gorilla
gorilla gorilla]
Length = 389
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPNSA------------PGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++M+ P
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPNPEGEGLPRCLEAPLPAVLPRDSMVEPCSMEDWQVCASY 333
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 334 LKTARVNMTVRQ 345
>gi|222628582|gb|EEE60714.1| hypothetical protein OsJ_14216 [Oryza sativa Japonica Group]
Length = 340
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
P+ IVN+Y S LG H D E+ +S P+VS S+G FL G +
Sbjct: 219 FKPEAAIVNYYGPSDMLGGHVDDMEADWSK----PIVSISLGCKCIFLLGGKTRDEVPTA 274
Query: 407 VLLESGDVLIFGGESRHVFHGVSSI 431
+ L SGD+++ GE+R FHGV I
Sbjct: 275 MFLRSGDIVLMAGEARECFHGVPRI 299
>gi|195553735|ref|XP_002076733.1| GD24673 [Drosophila simulans]
gi|194202723|gb|EDX16299.1| GD24673 [Drosophila simulans]
Length = 332
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
P+ IVN+Y L H D E K P+ SFS G +A FL G K
Sbjct: 185 FKPEAAIVNYYPVGSTLSGHTDHSEP----NKSAPLFSFSFGQTAIFLIGGRSLEEKPTA 240
Query: 407 VLLESGDVLIFGGESRHVFHGVSSI 431
+ L+ GDV+I GESR +H V I
Sbjct: 241 IYLQCGDVMIMSGESRLCYHAVPRI 265
>gi|123994055|gb|ABM84629.1| alkB, alkylation repair homolog 1 (E. coli) [synthetic construct]
Length = 389
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEALTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPNSA------------PGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++M+ P
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMVEPCSMEDWQVCASY 333
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 334 LKTARVNMTVRQ 345
>gi|389600803|ref|XP_001563639.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504523|emb|CAM37675.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 367
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 65/150 (43%), Gaps = 14/150 (9%)
Query: 282 LRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
+R LG ++ + Y + R S PS +Q + +S A ++ D
Sbjct: 137 MRWATLGYSYEWTQKVYHRDRY------STFPSALRQRMCDLVSLV-AEVRQDGFCCAYP 189
Query: 342 DILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDA 401
D P IVN+Y + HQD E +L++ P++S S+G SA FL G +
Sbjct: 190 DTY---EPQTAIVNYYPVGSMMMCHQDVSEE--TLEQ--PLMSLSLGCSAVFLMGTQSRE 242
Query: 402 NKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
+ LL SGDV F G SR FH I
Sbjct: 243 DAPHAFLLRSGDVAAFTGPSRAAFHSTPRI 272
>gi|395827622|ref|XP_003786998.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Otolemur
garnettii]
Length = 389
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKREEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPNSA------------PGALLENTMLRP------------ 448
D++I G SR + H V + PN P L ++++ P
Sbjct: 274 DIMIMSGFSRLLNHAVPRVLPNPEGESLPHCLETPLPAVLPRDSVIEPCSVEDWQVCASY 333
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 334 LKTARVNMTIRQ 345
>gi|342180461|emb|CCC89937.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 329
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 90/238 (37%), Gaps = 40/238 (16%)
Query: 207 DICLSRRRNFRM----EKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQEL 262
D+ + RN M ++ E R WT G PG+ L ++LT EQ + R L
Sbjct: 64 DVDRNTERNLSMISSEDRHEEGRVVKCWTFSGA--PGVTFLPNFLTEEEQQQLCRAAI-L 120
Query: 263 GKGPGGFY---------QPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIP 313
G G + +P + +R +G + ++ Y +++ S P
Sbjct: 121 EYGDSGLHPNHLSTHAKEPRETTRYEPPMRWATVGFSYQWSSKSYSREKY------SYFP 174
Query: 314 SEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESR 373
+ V+R ++ + P IVN++ + HQD E
Sbjct: 175 QRLRDCVER--------------ITRLCGTSVPYEPQTSIVNYFPVGAMMMAHQDVSEEM 220
Query: 374 YSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
P++S S+G FL G E + L SGDV++ G SR +HGV +
Sbjct: 221 LEQ----PLISMSLGCPCVFLMGTESRHDAPHAFWLRSGDVIVVTGASRTAYHGVPRV 274
>gi|108864398|gb|ABA93798.2| Alkylated DNA repair protein alkB, putative, expressed [Oryza
sativa Japonica Group]
gi|215692905|dbj|BAG88325.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 133
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
P+ IVN+Y S LG H D E+ +S P+VS S+G FL G +
Sbjct: 12 FKPEAAIVNYYGPSDMLGGHVDDMEADWSK----PIVSISLGCKCIFLLGGKTRDEVPTA 67
Query: 407 VLLESGDVLIFGGESRHVFHGVSSI 431
+ L SGD+++ GE+R FHGV I
Sbjct: 68 MFLRSGDIVLMAGEARECFHGVPRI 92
>gi|299753503|ref|XP_002911877.1| hypothetical protein CC1G_13917 [Coprinopsis cinerea okayama7#130]
gi|298410330|gb|EFI28383.1| hypothetical protein CC1G_13917 [Coprinopsis cinerea okayama7#130]
Length = 518
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY T L H DR E + P+VS S+G+++ FL G ++ +L
Sbjct: 286 PDAGIVNFYQTKDTLMAHVDRSE----VCATSPLVSISLGNASVFLIGGNTRESEPIPLL 341
Query: 409 LESGDVLIFGGE-SRHVFHGVSSINPNSAPGAL 440
L SGDV+I G +R +HGV I + P L
Sbjct: 342 LRSGDVVIMSGPVARRAYHGVPRILEETLPPHL 374
>gi|357624150|gb|EHJ75029.1| hypothetical protein KGM_19158 [Danaus plexippus]
Length = 336
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 82/213 (38%), Gaps = 42/213 (19%)
Query: 238 PGMVLLKHYLTIREQILIVRICQEL-GKGPG----------------GFYQPGYNDGAKL 280
PG++L+++ T Q +R C E+ K P Y N
Sbjct: 76 PGLILIRNPFTSLGQRFWIRKCLEIYPKKPNRTNIDVETHIDDWWSECHYSERNNSKLLK 135
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR LG + T+ Y ++ + V PSE +L AH L
Sbjct: 136 KLRWTTLGYHHNWDTKVYTEENK------GVFPSELSELADIV---AHYLG--------- 177
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
+ IVN+Y+ S L H D E + P+ SFS G S+ FL G +
Sbjct: 178 ---YEGFRAEAAIVNYYHMSSTLSAHTDHSE----INLEAPLFSFSFGQSSIFLIGGQDK 230
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSINP 433
+LL SGD++I E+R +H V I P
Sbjct: 231 FINPIPILLNSGDIVIMSKEARLCYHAVPKILP 263
>gi|336367101|gb|EGN95446.1| hypothetical protein SERLA73DRAFT_162321 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379822|gb|EGO20976.1| hypothetical protein SERLADRAFT_452119 [Serpula lacrymans var.
lacrymans S7.9]
Length = 443
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY T L H DR E + P+VS S+G++A FL G +L
Sbjct: 307 PDAGIVNFYQTKDTLMAHVDRSE----VCATSPLVSISLGNAAIFLIGGLTRDTAPIPIL 362
Query: 409 LESGDVLIFGGES-RHVFHGVSSINPNSAPGAL 440
+ SGDV+I G + R +HGV I N+ P L
Sbjct: 363 VRSGDVIIMSGPACRRAYHGVPRILDNTLPPHL 395
>gi|194894142|ref|XP_001978017.1| GG19363 [Drosophila erecta]
gi|190649666|gb|EDV46944.1| GG19363 [Drosophila erecta]
Length = 332
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
P+ IVN+Y L H D E K P+ SFS G +A FL G K
Sbjct: 185 FKPEAAIVNYYPLGSTLSGHTDHSEP----NKSAPLFSFSFGQTAIFLIGGRTLEEKPTA 240
Query: 407 VLLESGDVLIFGGESRHVFHGVSSI 431
+ L+ GDV+I GESR +H V I
Sbjct: 241 IYLQCGDVMIMSGESRLCYHAVPRI 265
>gi|413920824|gb|AFW60756.1| hypothetical protein ZEAMMB73_863004 [Zea mays]
Length = 366
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 279 KLRLRMMCLGLDWDPQTRKYGKKRQVDGCEP-SVIPSEFKQLVQRSMSEAHALIKMDSKV 337
KLR + L DW KR D P + IP L ++ A+ M S
Sbjct: 197 KLRWSTLGLQFDW--------SKRNYDVSLPHNKIPGALASLAKK-----MAIPAMPSGE 243
Query: 338 SNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD 397
P+ IVN+Y S LG H D E+ ++ P+VS S+G FL G
Sbjct: 244 E--------FKPEAAIVNYYGPSDMLGGHVDDMEADWTK----PIVSISLGCKCIFLLGG 291
Query: 398 ERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
+ + L SGD+++ GE+R FHGV I
Sbjct: 292 KTRDEVPTAMFLRSGDIVLMAGEARERFHGVPRI 325
>gi|312088227|ref|XP_003145778.1| ALKBH protein [Loa loa]
Length = 360
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 119/308 (38%), Gaps = 62/308 (20%)
Query: 184 YFKHELDAKKWDSSHRLHNVEP-FDICLSRR----------RNFR--------MEKENEC 224
Y+K + D + + ++ H++ P F L+ R NF+ M ++
Sbjct: 72 YYKTKHDERIRQAFYKRHDIAPNFSKVLNLRCSSSAHGIICSNFKPVVAPSDLMLEKLGL 131
Query: 225 RQTVDWTREGIL-RPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYN-------- 275
R +WT I+ R GM++L + ++ + P GF G +
Sbjct: 132 RPLSEWTASTIIHRQGMIMLNDIFKSVSHLQWIKRSLFVYAEPPGFTNVGLHVPNVQNVF 191
Query: 276 DGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDS 335
+ +LR LGL +D T+ Y E +P E L+ +
Sbjct: 192 KEYRRQLRWSTLGLHYDWATKTYP-------FEGESLPEE--------------LVLLSD 230
Query: 336 KVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLY 395
+S I P + D I+NFY+ L H DR E K P++S S G +A +L
Sbjct: 231 VLSQALGIGP-MYADAAIINFYSRKSTLAPHVDRSER----KLVSPLISLSFGQTAIYLA 285
Query: 396 GDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI------NPNSAPGALLENTMLRPG 449
G + + + SGDVLI G R ++H V I P +++
Sbjct: 286 GGNDLDDPVDAFYIRSGDVLIVYGSQRLIYHAVPRILQDKQFEDKDQPEEIVKYA--NKN 343
Query: 450 RLNLTFRQ 457
R+N+T RQ
Sbjct: 344 RVNITLRQ 351
>gi|118404160|ref|NP_001072394.1| alkB, alkylation repair homolog 1 [Xenopus (Silurana) tropicalis]
gi|111309104|gb|AAI21592.1| alkB, alkylation repair homolog [Xenopus (Silurana) tropicalis]
Length = 213
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ I+N+Y+ LG+H D E L P++SFS G S FL G + ++
Sbjct: 30 PEAGILNYYHLDSSLGIHVDESE----LDHQSPLLSFSFGQSCIFLLGGLNREHMPTPMM 85
Query: 409 LESGDVLIFGGESRHVFHGVSSINP 433
+ SGD+++ G+SR ++H V I P
Sbjct: 86 MHSGDIMVMSGQSRLLYHAVPRILP 110
>gi|351698328|gb|EHB01247.1| Alkylated DNA repair protein alkB-like protein 1 [Heterocephalus
glaber]
Length = 389
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYYLDSTLGIHVDRSE----LDHSRPLLSFSFGQSAIFLLGGIKRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPNSA------------PGALLENTMLRP------------ 448
D+++ G SR + H V I PN P L ++ +++P
Sbjct: 274 DIMVMSGFSRLLNHAVPRILPNPEGEGLPHCLETPLPAVLPKDAVVQPCSVEDWQVCASY 333
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 334 LRTARVNMTVRQ 345
>gi|145488027|ref|XP_001430018.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397113|emb|CAK62620.1| unnamed protein product [Paramecium tetraurelia]
Length = 304
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 41/213 (19%)
Query: 239 GMVLLKHYLTIREQILIVRICQE------------LGKGPGGFYQPGYNDGAKL----RL 282
G++L+K +L + +QI I ++C + K F + +D K ++
Sbjct: 71 GVILVKGFLNLDDQISISKLCMNEYINQPYRTNLFIYKEDENFDKFIVHDDKKYHFNNKI 130
Query: 283 RMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVED 342
R +G +D R Y E + +P +++ QR+ +N
Sbjct: 131 RWANVGYQYDWNNRHYPP-------EKTQVPDPIQEISQRA--------------NNFLQ 169
Query: 343 ILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDAN 402
+ + I+NFY + + H D E L + P+ SFS G S+ F+ G
Sbjct: 170 LQNHYQSESVIINFYQSHDYMTGHLDDAE----LDQDSPIYSFSFGLSSVFVIGGPTKDE 225
Query: 403 KAEKVLLESGDVLIFGGESRHVFHGVSSINPNS 435
K + L+SGD+L+ G +R +HGV + NS
Sbjct: 226 KPVAIKLDSGDLLVMSGHARKCYHGVPRVLENS 258
>gi|449274830|gb|EMC83908.1| Alkylated DNA repair protein alkB like protein 1, partial [Columba
livia]
Length = 327
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y+ LG+H D E L P++SFS G S+ FL G + + + SG
Sbjct: 158 ILNYYHFDSSLGIHVDESE----LDHSRPLLSFSFGQSSIFLLGGRKREEAPTAMFMHSG 213
Query: 413 DVLIFGGESRHVFHGVSSINPN 434
D+++ G SR ++H V + PN
Sbjct: 214 DIMVMSGFSRLLYHAVPRVLPN 235
>gi|159479846|ref|XP_001697997.1| hypothetical protein CHLREDRAFT_151320 [Chlamydomonas reinhardtii]
gi|158273796|gb|EDO99582.1| predicted protein [Chlamydomonas reinhardtii]
Length = 398
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVN+Y LG H D ES + P+VS S+G A FL G A +L
Sbjct: 325 PDAAIVNYYQIGDVLGGHVDDVESDLAQ----PIVSVSLGCPALFLMGGRTKATHPSALL 380
Query: 409 LESGDVLIFGGESRHVFH 426
L GDVL+ G++R +H
Sbjct: 381 LRGGDVLVLAGQARSCYH 398
>gi|148671002|gb|EDL02949.1| mCG17465, isoform CRA_c [Mus musculus]
Length = 255
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 84 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSG 139
Query: 413 DVLIFGGESRHVFHGVSSINPN------------SAPGALLEN---------------TM 445
D+++ G SR + H V + P+ P L N T
Sbjct: 140 DIMVMSGFSRLLNHAVPRVLPHPDGECLPHCLETPLPAVLPSNSLVEPCSVEDWQVCATY 199
Query: 446 LRPGRLNLTFRQ 457
LR R+N+T RQ
Sbjct: 200 LRTARVNMTVRQ 211
>gi|66808825|ref|XP_638135.1| alkylated DNA repair protein [Dictyostelium discoideum AX4]
gi|74853785|sp|Q54N08.1|ALKB_DICDI RecName: Full=Alpha-ketoglutarate-dependent dioxygenase alkB;
AltName: Full=Alkylated DNA repair protein alkB
gi|60466573|gb|EAL64625.1| alkylated DNA repair protein [Dictyostelium discoideum AX4]
Length = 393
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 312 IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDE 371
P + ++LVQ+ K D V+ + VNFY+ +G H D E
Sbjct: 239 FPDDLQELVQK----IAIATKFDPYVA-----------EAATVNFYSEDSIMGGHLDDAE 283
Query: 372 SRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
++K P++S S G +A FL G E + + SGD++I GG SR+ +HGV+ I
Sbjct: 284 QE--MEK--PIISISFGSTAVFLMGAETRDIAPVPLFIRSGDIVIMGGRSRYCYHGVAKI 339
Query: 432 NPNSAPGALLE 442
NS L++
Sbjct: 340 VENSFDLGLID 350
>gi|440894743|gb|ELR47118.1| Alkylated DNA repair protein alkB-like protein 1 [Bos grunniens
mutus]
Length = 389
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSRPLLSFSFGQSAIFLLGGLKRDEAPTPMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPN----SAPGAL 440
D+++ G SR V H V + P+ S PG L
Sbjct: 274 DIMVMSGFSRLVNHAVPRVLPSPEGESLPGCL 305
>gi|149025282|gb|EDL81649.1| alkB, alkylation repair homolog (E. coli) (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 255
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 84 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSG 139
Query: 413 DVLIFGGESRHVFHGVSSINPNS-----------------APGALLE----------NTM 445
D+++ G SR + H V + P+ G+LLE T
Sbjct: 140 DIMVMSGFSRLLNHAVPRVLPHPDGECLPHCLETPLPAVLPSGSLLEPCSVEDWQVCATY 199
Query: 446 LRPGRLNLTFRQ 457
L+ R+N+T RQ
Sbjct: 200 LKTARVNMTVRQ 211
>gi|156523266|ref|NP_001096035.1| alkylated DNA repair protein alkB homolog 1 [Mus musculus]
gi|261263115|sp|P0CB42.1|ALKB1_MOUSE RecName: Full=Alkylated DNA repair protein alkB homolog 1; AltName:
Full=Alpha-ketoglutarate-dependent dioxygenase ABH1;
AltName: Full=DNA lyase ABH1; AltName: Full=DNA
oxidative demethylase ALKBH1
Length = 389
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPN------------SAPGALLEN---------------TM 445
D+++ G SR + H V + P+ P L N T
Sbjct: 274 DIMVMSGFSRLLNHAVPRVLPHPDGECLPHCLETPLPAVLPSNSLVEPCSVEDWQVCATY 333
Query: 446 LRPGRLNLTFRQ 457
LR R+N+T RQ
Sbjct: 334 LRTARVNMTVRQ 345
>gi|157867117|ref|XP_001682113.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68125565|emb|CAJ03488.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 368
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 91/226 (40%), Gaps = 46/226 (20%)
Query: 225 RQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQEL-----------------GKGP- 266
++ + +T G+ PG++L L+ EQ R C+E K P
Sbjct: 74 KEVLCYTFAGV--PGLLLFPGVLSEAEQ---QRWCREAVLDYADSAKHPNILSTHAKAPQ 128
Query: 267 -GGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMS 325
YQP +R LG ++ + Y + R S PS + + +S
Sbjct: 129 STSCYQPP--------MRWATLGYSYEWTQKVYCRDRY------STFPSALRTRMCDLVS 174
Query: 326 EAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSF 385
A ++ D D+ P IVN+Y + HQD E +L++ P++S
Sbjct: 175 LV-AGVRQDGFCCAYPDVY---EPQTAIVNYYPVGSMMMCHQDISEE--TLEQ--PLMSL 226
Query: 386 SVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
S+G SA FL G + + LL SGDV F G SR FH + I
Sbjct: 227 SLGCSAIFLMGTQSREDAPYAFLLRSGDVAAFTGPSRSAFHSIPRI 272
>gi|393220426|gb|EJD05912.1| hypothetical protein FOMMEDRAFT_145266 [Fomitiporia mediterranea
MF3/22]
Length = 420
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 16/121 (13%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY L H DR E + P+VS S+G++A FL G + +L
Sbjct: 294 PDAGIVNFYQYKDTLMGHVDRAE----VCATSPLVSLSLGNAAVFLIGGPTRDQEPVAIL 349
Query: 409 LESGDVLIFGGES-RHVFHGVSSI---------NPNSAPGA--LLENTMLRPGRLNLTFR 456
L SGD ++ G + R V+HGV + + S PG+ + + L+ R+N+ R
Sbjct: 350 LRSGDAIVMAGPACRRVYHGVPRVLEGTLPERLDIRSCPGSDWAIYSRYLQSTRINVNVR 409
Query: 457 Q 457
Q
Sbjct: 410 Q 410
>gi|198417894|ref|XP_002120909.1| PREDICTED: similar to AlkB CG33250-PA [Ciona intestinalis]
Length = 312
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
IVN+Y+ L H D E L P+VS S G SA FL G K E + + SG
Sbjct: 202 IVNYYHVGNALSPHDDTSE----LYLEAPLVSLSFGLSAVFLIGGTSKDQKPEALFIRSG 257
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTM-------LRPGRLNLTFRQ 457
DV+I G SR +H V I ++ L +++ + RLN+ RQ
Sbjct: 258 DVIIMSGASRLAYHAVPRILKPTSDAQLKSSSVADNLDLFMSHSRLNINIRQ 309
>gi|149633200|ref|XP_001505295.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like
[Ornithorhynchus anatinus]
Length = 370
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 199 ILNYYRLDSTLGIHVDRSE----LDHSRPLLSFSFGQSAIFLLGGLKRDEAPTAMFVHSG 254
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGALLENTML 446
D+++ G SR + H V + PN LE T+L
Sbjct: 255 DIMVMSGFSRLLNHAVPRVLPN------LEGTIL 282
>gi|71895969|ref|NP_001026723.1| alkylated DNA repair protein alkB homolog 1 [Gallus gallus]
gi|60099019|emb|CAH65340.1| hypothetical protein RCJMB04_19i4 [Gallus gallus]
Length = 371
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y+ LG+H D E L P++SFS G S+ FL G + + + SG
Sbjct: 203 ILNYYHFDSSLGIHVDESE----LDHSRPLLSFSFGQSSIFLLGGLKREEAPTAMFMHSG 258
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGAL 440
D+++ G SR ++H V + PN AL
Sbjct: 259 DIMVMSGFSRLLYHAVPRVLPNPEGTAL 286
>gi|401418456|ref|XP_003873719.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489951|emb|CBZ25211.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 368
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 14/150 (9%)
Query: 282 LRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
+R LG ++ + Y + R S PS ++ + +S A ++ D
Sbjct: 137 MRWATLGYSYEWTQKVYHRDRY------SAFPSALRKRMCDLVSLV-AEVRQDGFCCAYP 189
Query: 342 DILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDA 401
D+ P IVN+Y + HQD E +L++ P++S S+G SA FL G +
Sbjct: 190 DVY---EPQTAIVNYYPVGSMMMCHQDVSEE--TLEQ--PLMSLSLGCSAIFLMGTQSRE 242
Query: 402 NKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
+ LL SGDV F G SR FH I
Sbjct: 243 DAPYAFLLRSGDVAAFTGPSRSAFHSTPRI 272
>gi|328872504|gb|EGG20871.1| alkylated DNA repair protein [Dictyostelium fasciculatum]
Length = 399
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 354 VNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGD 413
VNFY+ +G H D E ++K P++S S G SA FL G E + + SGD
Sbjct: 269 VNFYSEDSVMGGHLDDAEEE--MEK--PIISLSFGASAVFLLGAETRDIAPIPLFIRSGD 324
Query: 414 VLIFGGESRHVFHGVSSINPNS 435
++I GG SR+ +HGV+ I NS
Sbjct: 325 IVIMGGRSRYCYHGVAKIVENS 346
>gi|410962725|ref|XP_003987919.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Felis
catus]
Length = 389
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPNSA------------PGALLENTMLRP------------ 448
D+++ G SR + H V + P+S P L ++++ P
Sbjct: 274 DIMVMSGFSRLLSHAVPRVLPSSQGEGLPCCLETPLPAVLPRDSVVEPCSEEDWQVCTSY 333
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 334 LKTARVNMTVRQ 345
>gi|354474981|ref|XP_003499708.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 isoform 2
[Cricetulus griseus]
Length = 391
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 220 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 275
Query: 413 DVLIFGGESRHVFHGVSSINPN------------SAPGALLENTMLRP------------ 448
D+++ G SR + H V + P+ P L N+++ P
Sbjct: 276 DIMVMSGFSRLLNHAVPRVLPHPDGECLPHCLETPLPAVLPSNSLVEPCSEEDWQVCATY 335
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 336 LKTARVNMTVRQ 347
>gi|242070933|ref|XP_002450743.1| hypothetical protein SORBIDRAFT_05g016810 [Sorghum bicolor]
gi|241936586|gb|EES09731.1| hypothetical protein SORBIDRAFT_05g016810 [Sorghum bicolor]
Length = 362
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 279 KLRLRMMCLGLDWDPQTRKYGKKRQVDGCEP-SVIPSEFKQLVQRSMSEAHALIKMDSKV 337
KLR + L DW KR D P + IP L ++ A+ M S
Sbjct: 193 KLRWSTLGLQFDW--------SKRNYDVSLPHNKIPDALAGLAKK-----MAIPAMPSG- 238
Query: 338 SNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD 397
P+ IVN+Y S LG H D E+ ++ P+VS S+G FL G
Sbjct: 239 -------EEFKPEAAIVNYYGPSDMLGGHVDDMEADWTK----PIVSISLGCKCIFLLGG 287
Query: 398 ERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
+ + L SGD+++ GE+R FHGV I
Sbjct: 288 KTRDEVPTAMFLRSGDIVLMAGEARERFHGVPRI 321
>gi|224051564|ref|XP_002200058.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Taeniopygia
guttata]
Length = 367
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y+ LG+H D E L P++SFS G S+ FL G + + + SG
Sbjct: 199 ILNYYHFDSSLGIHVDESE----LDHSRPLLSFSFGQSSIFLLGGLKREEAPTAMFMHSG 254
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGAL 440
D+++ G SR ++H V + PN AL
Sbjct: 255 DIMVMSGFSRLLYHAVPRVLPNPEGTAL 282
>gi|354474979|ref|XP_003499707.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 isoform 1
[Cricetulus griseus]
Length = 389
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPN------------SAPGALLENTMLRP------------ 448
D+++ G SR + H V + P+ P L N+++ P
Sbjct: 274 DIMVMSGFSRLLNHAVPRVLPHPDGECLPHCLETPLPAVLPSNSLVEPCSEEDWQVCATY 333
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 334 LKTARVNMTVRQ 345
>gi|356540136|ref|XP_003538546.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB-like
[Glycine max]
Length = 358
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVN++ LG H D E+ +S P+VS S+G A FL G + + +
Sbjct: 239 PDAAIVNYFGLGDTLGGHLDDMEADWSK----PIVSLSLGCKAIFLLGGKSREDTPLAMF 294
Query: 409 LESGDVLIFGGESRHVFHGVSSI 431
L SGD ++ G++R FHGV I
Sbjct: 295 LRSGDAVLMAGDARECFHGVPRI 317
>gi|340506165|gb|EGR32370.1| hypothetical protein IMG5_085860 [Ichthyophthirius multifiliis]
Length = 500
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 45/218 (20%)
Query: 238 PGMVLLKHYLTIREQILIVRICQE-------------LGKGPGGFYQPGY-------NDG 277
PG+ ++K+ L+I++Q+ I + C + P Y ND
Sbjct: 242 PGVYIVKNLLSIQQQLEIAQQCLNNYIKKPYRTNLFIYEENPDCIQSKEYSLNKFLINDY 301
Query: 278 AKL----RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKM 333
K ++R +G +D RKY PS +E +L+Q + L +
Sbjct: 302 KKYHFNKKIRWTNVGAQYDWDNRKY----------PS-FSTEIPELIQNLSKISKELFQK 350
Query: 334 DSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEF 393
+ + D+ P+ I+NFY+ + H D E + P+ SFS G S F
Sbjct: 351 E-----IPDV-SLYEPEAVIINFYDKKNYMSGHLDDGEK----DQKSPIFSFSFGVSCVF 400
Query: 394 LYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
L GD + L+SGD+++ G SR+ +HGV +
Sbjct: 401 LMGDVNKDFSPLPIKLDSGDLMVMSGYSRNCYHGVPRV 438
>gi|348573447|ref|XP_003472502.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like [Cavia
porcellus]
Length = 389
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 218 ILNYYRLDSTLGIHVDRSE----LDHSRPLLSFSFGQSAIFLLGGLKRDETPTAMFMHSG 273
Query: 413 DVLIFGGESRHVFHGVSSINPN 434
D+++ G SR + H V + PN
Sbjct: 274 DIMVMSGFSRLLNHAVPRVLPN 295
>gi|344249815|gb|EGW05919.1| Alkylated DNA repair protein alkB-like 1 [Cricetulus griseus]
Length = 258
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 84 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSG 139
Query: 413 DVLIFGGESRHVFHGVSSINPN------------SAPGALLENTMLRP------------ 448
D+++ G SR + H V + P+ P L N+++ P
Sbjct: 140 DIMVMSGFSRLLNHAVPRVLPHPDGECLPHCLETPLPAVLPSNSLVEPCSEEDWQVCATY 199
Query: 449 ---GRLNLTFRQ 457
R+N+T RQ
Sbjct: 200 LKTARVNMTVRQ 211
>gi|326920865|ref|XP_003206687.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like
[Meleagris gallopavo]
Length = 365
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y+ LG+H D E L P++SFS G S+ FL G + + + SG
Sbjct: 196 ILNYYHFDSSLGIHVDESE----LDHSHPLLSFSFGQSSIFLLGGLKREEAPTAMFMHSG 251
Query: 413 DVLIFGGESRHVFHGVSSINPNSAPGAL 440
D+++ G SR ++H V + PN AL
Sbjct: 252 DIMVMSGFSRLLYHAVPRVLPNPEGTAL 279
>gi|148223171|ref|NP_001087992.1| alkB, alkylation repair homolog 1 [Xenopus laevis]
gi|52138927|gb|AAH82669.1| LOC494680 protein [Xenopus laevis]
Length = 397
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
P+ I+N+Y+ LG+H D E L P++SFS G S FL G +
Sbjct: 213 FKPEAGILNYYHLDSSLGIHVDESE----LDHQSPLLSFSFGQSCIFLLGGLNREHMPTP 268
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINP 433
+++ SGD+++ G SR ++H V I P
Sbjct: 269 MMMHSGDIMVMSGPSRLLYHAVPRILP 295
>gi|397602266|gb|EJK58131.1| hypothetical protein THAOC_21767 [Thalassiosira oceanica]
Length = 380
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 350 DICIVNFYNT---SGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
D+ I N Y+ S RLG H+D E SL P+V+ S+G FL G E +
Sbjct: 231 DMAICNLYHLQRPSDRLGGHRDDVEEDLSL----PLVTISLGAPGVFLLGGESRQDAPTA 286
Query: 407 VLLESGDVLIFGGESRHVFHGVSSI 431
+LL +GD ++ G SR FHGV ++
Sbjct: 287 ILLRAGDCMVMSGRSRKYFHGVPTV 311
>gi|343172810|gb|AEL99108.1| alpha-ketoglutarate-dependent dioxygenase alkB, partial [Silene
latifolia]
Length = 354
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+L LGL +D R Y VD + IP + QL ++ A L
Sbjct: 185 KLHWSTLGLQFDWSQRNY----NVD-LPHNKIPDKLCQLAKKLAVPAMPLGD-------- 231
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERD 400
P+ IVN++ + LG H D E +S P+VS S+G FL G +
Sbjct: 232 -----NFKPEAAIVNYFASGDTLGGHLDDMELDWSK----PIVSMSLGCKGIFLLGGKSR 282
Query: 401 ANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
++ + L SGDV++ GE+R FHGV I
Sbjct: 283 EDEPLAMFLRSGDVVLMAGEARECFHGVPRI 313
>gi|347963275|ref|XP_310984.4| AGAP000155-PA [Anopheles gambiae str. PEST]
gi|333467277|gb|EAA06442.4| AGAP000155-PA [Anopheles gambiae str. PEST]
Length = 318
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 61/150 (40%), Gaps = 25/150 (16%)
Query: 282 LRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
LR LG +D + Y + R+ EP P E LV+ + + D
Sbjct: 130 LRWATLGYQYDWTNKLYDEARR----EP--FPCELGALVRYVATT----LGYDR------ 173
Query: 342 DILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDA 401
SP+ IVN+Y L H D E + P+ SFS G A FL G
Sbjct: 174 -----FSPEAAIVNYYPAGATLAGHTDHSED----DQTAPLFSFSFGQPAVFLIGGTSRE 224
Query: 402 NKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
+ +LL SGD+++ G SR +H V +
Sbjct: 225 EHPDALLLRSGDIVVMTGASRLCYHAVPRV 254
>gi|126282539|ref|XP_001373939.1| PREDICTED: alkylated DNA repair protein alkB homolog 1-like
[Monodelphis domestica]
Length = 377
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 211 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEVPTAMFMHSG 266
Query: 413 DVLIFGGESRHVFHGVSSINPN 434
D+++ G SR + H V + PN
Sbjct: 267 DIMVMSGFSRLLNHAVPRVLPN 288
>gi|330799708|ref|XP_003287884.1| hypothetical protein DICPUDRAFT_55106 [Dictyostelium purpureum]
gi|325082087|gb|EGC35581.1| hypothetical protein DICPUDRAFT_55106 [Dictyostelium purpureum]
Length = 328
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 312 IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQDRDE 371
P + ++LVQ+ K D V+ + +NFY+ +G H D E
Sbjct: 176 FPDDLQELVQK----IAVATKFDPYVA-----------EAATINFYSEDSIMGGHLDNAE 220
Query: 372 SRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSI 431
++K P++S S G +A FL G E + ++SGD++I GG SR+ +HGV+ I
Sbjct: 221 Q--EMEK--PIISISFGSTAVFLMGAETRDIAPVPLFIKSGDIVIMGGRSRYCYHGVAKI 276
Query: 432 NPNS 435
+S
Sbjct: 277 VEDS 280
>gi|426234305|ref|XP_004011136.1| PREDICTED: LOW QUALITY PROTEIN: alkylated DNA repair protein alkB
homolog 1 [Ovis aries]
Length = 386
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 215 ILNYYRLDSTLGIHVDRSE----LDHSRPLLSFSFGQSAIFLLGGLKRDEAPTPMFMHSG 270
Query: 413 DVLIFGGESRHVFHGVSSINPN----SAPGAL 440
D+++ G SR + H V + P+ S PG L
Sbjct: 271 DIMVMSGFSRLLNHAVPRVLPSPEGESLPGCL 302
>gi|255547710|ref|XP_002514912.1| Alkylated DNA repair protein alkB, putative [Ricinus communis]
gi|223545963|gb|EEF47466.1| Alkylated DNA repair protein alkB, putative [Ricinus communis]
Length = 333
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 28/149 (18%)
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
+LR LGL +D R Y + IP QL +R + A
Sbjct: 190 KLRWSTLGLQFDWSKRNYNVSLLHNK-----IPDALCQLAKRLAAPA------------- 231
Query: 341 EDILP---ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD 397
+P P+ IVN++ + LG H D E+ +S P+VS S+G A FL G
Sbjct: 232 ---MPRGEEFHPEAAIVNYFGSGDTLGGHLDDMEADWSK----PIVSMSLGCKAIFLLGG 284
Query: 398 ERDANKAEKVLLESGDVLIFGGESRHVFH 426
+ + + L+SGDV++ GE+R FH
Sbjct: 285 KSREDPPLAMFLQSGDVMLMAGEARECFH 313
>gi|357160283|ref|XP_003578715.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB-like
isoform 2 [Brachypodium distachyon]
Length = 363
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 77/193 (39%), Gaps = 39/193 (20%)
Query: 279 KLRLRMMCLGLDWDPQTRKYGKKRQVDGCEP-SVIPSEFKQLVQRSMSEAHALIKMDSKV 337
KLR + L DW KR D P + IP L ++ A+ M S
Sbjct: 194 KLRWSTLGLQFDW--------SKRNYDVLLPHNKIPDHLATLAKK-----MAIPAMPSGE 240
Query: 338 SNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD 397
+ + IVN+Y S LG H D E+ ++ P+VS S+G FL G
Sbjct: 241 E--------FNAEAAIVNYYGPSDMLGGHVDDMEADWTK----PIVSISLGCKCIFLLGG 288
Query: 398 ERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLE-------------NT 444
+ + L SGD+++ GE+R FHGV I S +L +
Sbjct: 289 KTRDEAPRAMFLRSGDIVLMAGEARERFHGVPRIFTESDQQEILAVVSQLSGDDDRFISD 348
Query: 445 MLRPGRLNLTFRQ 457
+R R+N+ RQ
Sbjct: 349 YIRNSRININIRQ 361
>gi|324509932|gb|ADY44159.1| Alkylated DNA repair protein alkB 1 [Ascaris suum]
Length = 390
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 19/138 (13%)
Query: 333 MDSKVSNVEDILP------ALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFS 386
+ S++ V DI+ A+ D I+N+Y L H DR E R+ ++ P++S S
Sbjct: 251 LPSELVTVADIISRALGIGAMQADATIINYYPPKSTLSPHIDRSE-RFLIR---PLISLS 306
Query: 387 VGDSAEFLYGDERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPN-------SAPGA 439
G SA +L G + + L SGDVL+ + R V+H V I + P
Sbjct: 307 FGQSAVYLSGGTSLDDPVDAFFLHSGDVLVMHAKQRLVYHAVPHIEKTRNFELSAAIPRE 366
Query: 440 LLENTMLRPGRLNLTFRQ 457
++E R+N+T RQ
Sbjct: 367 IVEYA--NKNRINVTIRQ 382
>gi|157133074|ref|XP_001656162.1| hypothetical protein AaeL_AAEL002945 [Aedes aegypti]
Length = 292
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
P+ IVN+Y T L H D E P+ SFS G A FL G K +
Sbjct: 134 FKPEAAIVNYYPTGSTLAGHTDHSEKNLEA----PLFSFSFGQPAVFLIGGPTRDEKPDA 189
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINP 433
+LL SGDV++ SR +H V + P
Sbjct: 190 LLLRSGDVIVMTRASRLCYHAVPKVFP 216
>gi|403182514|gb|EAT45815.2| AAEL002945-PA [Aedes aegypti]
Length = 297
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
P+ IVN+Y T L H D E P+ SFS G A FL G K +
Sbjct: 139 FKPEAAIVNYYPTGSTLAGHTDHSEKNLEA----PLFSFSFGQPAVFLIGGPTRDEKPDA 194
Query: 407 VLLESGDVLIFGGESRHVFHGVSSINP 433
+LL SGDV++ SR +H V + P
Sbjct: 195 LLLRSGDVIVMTRASRLCYHAVPKVFP 221
>gi|115485553|ref|NP_001067920.1| Os11g0488500 [Oryza sativa Japonica Group]
gi|113645142|dbj|BAF28283.1| Os11g0488500, partial [Oryza sativa Japonica Group]
Length = 325
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
P+ IVN+Y S LG H D E+ +S P+VS S+G FL G +
Sbjct: 245 FKPEAAIVNYYGPSDMLGGHVDDMEADWSK----PIVSISLGCKCIFLLGGKTRDEVPTA 300
Query: 407 VLLESGDVLIFGGESRHVFHG 427
+ L SGD+++ GE+R FHG
Sbjct: 301 MFLRSGDIVLMAGEARECFHG 321
>gi|449543462|gb|EMD34438.1| hypothetical protein CERSUDRAFT_67441 [Ceriporiopsis subvermispora
B]
Length = 433
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY T L H DR E + P+VS S+G +A FL G +
Sbjct: 308 PDAGIVNFYQTRDTLMAHVDRSE----ICATSPLVSISLGCAAIFLIGGLTRDEAPYPIF 363
Query: 409 LESGDVLIFGGES-RHVFHGVSSINPNSAP 437
L SGD+++ G + R +HGV I N+ P
Sbjct: 364 LRSGDIVVMSGPACRRAYHGVPRILENTLP 393
>gi|357160280|ref|XP_003578714.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB-like
isoform 1 [Brachypodium distachyon]
Length = 369
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 77/193 (39%), Gaps = 39/193 (20%)
Query: 279 KLRLRMMCLGLDWDPQTRKYGKKRQVDGCEP-SVIPSEFKQLVQRSMSEAHALIKMDSKV 337
KLR + L DW KR D P + IP L ++ A+ M S
Sbjct: 200 KLRWSTLGLQFDW--------SKRNYDVLLPHNKIPDHLATLAKK-----MAIPAMPSG- 245
Query: 338 SNVEDILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGD 397
+ + IVN+Y S LG H D E+ ++ P+VS S+G FL G
Sbjct: 246 -------EEFNAEAAIVNYYGPSDMLGGHVDDMEADWTK----PIVSISLGCKCIFLLGG 294
Query: 398 ERDANKAEKVLLESGDVLIFGGESRHVFHGVSSINPNSAPGALLE-------------NT 444
+ + L SGD+++ GE+R FHGV I S +L +
Sbjct: 295 KTRDEAPRAMFLRSGDIVLMAGEARERFHGVPRIFTESDQQEILAVVSQLSGDDDRFISD 354
Query: 445 MLRPGRLNLTFRQ 457
+R R+N+ RQ
Sbjct: 355 YIRNSRININIRQ 367
>gi|444708830|gb|ELW49869.1| Alkylated DNA repair protein alkB like protein 1 [Tupaia chinensis]
Length = 358
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 187 ILNYYRLDSTLGIHVDRSE----LDHSKPLLSFSFGQSAIFLLGGLKRDEVPTAMFMHSG 242
Query: 413 DVLIFGGESRHVFHGVSSINPN 434
D+++ G SR + H V + PN
Sbjct: 243 DIMVMSGFSRLLNHAVPRVLPN 264
>gi|223972739|gb|ACN30557.1| unknown [Zea mays]
Length = 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 347 LSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEK 406
P+ IVN+Y S LG H D E+ ++ P+VS S+G FL G +
Sbjct: 12 FKPEAAIVNYYGPSDMLGGHVDDMEADWTK----PIVSISLGCKCIFLLGGKTRDEVPTA 67
Query: 407 VLLESGDVLIFGGESRHVFHGVSSI 431
+ L SGD+++ GE+R FHGV I
Sbjct: 68 MFLRSGDIVLMAGEARERFHGVPRI 92
>gi|395503799|ref|XP_003756249.1| PREDICTED: alkylated DNA repair protein alkB homolog 1 [Sarcophilus
harrisii]
Length = 377
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 353 IVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLESG 412
I+N+Y LG+H DR E L P++SFS G SA FL G + + + SG
Sbjct: 211 ILNYYRLDSTLGIHVDRSE----LDHTKPLLSFSFGQSAIFLLGGLKRDEVPTAMFMHSG 266
Query: 413 DVLIFGGESRHVFHGVSSINPN 434
D+++ G SR + H V + PN
Sbjct: 267 DIMVMSGFSRLLNHAVPRVLPN 288
>gi|341892671|gb|EGT48606.1| hypothetical protein CAEBREN_21324 [Caenorhabditis brenneri]
Length = 311
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 282 LRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
LR LG+++D T++Y + +P E QL LI K+ +
Sbjct: 152 LRWTTLGVEYDWNTKQYPPNGRP-------VPEELYQL--------GNLISNSLKLGD-- 194
Query: 342 DILPALSPDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDA 401
+ PD I+N+Y L H D+ E + P++S S+G +A +L G +
Sbjct: 195 -----MRPDATILNYYPPKSALSPHVDKSE-----RSNAPLISMSLGQTAVYLSGALSLS 244
Query: 402 NKAEKVLLESGDVLIFGGESRHVFHGVSSINP 433
+ L +GD LI GE R V+H + I P
Sbjct: 245 EPPIPLWLRNGDFLIMHGEQRLVYHAIPCIGP 276
>gi|340053067|emb|CCC47352.1| putative Alkylated DNA repair protein (alkB homolog) [Trypanosoma
vivax Y486]
Length = 343
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P IVN++ + HQD E +L + P++S S+G S FL G + +
Sbjct: 197 PQTSIVNYFPVGTMMMAHQDLSEE--TLDQ--PLISISLGCSCVFLIGTTSREDAPHAIW 252
Query: 409 LESGDVLIFGGESRHVFHGVSSI 431
L SGDVL+ GESR FHGV +
Sbjct: 253 LRSGDVLVMCGESRMAFHGVPRV 275
>gi|118346635|ref|XP_977046.1| hypothetical protein TTHERM_00035460 [Tetrahymena thermophila]
gi|89288563|gb|EAR86551.1| hypothetical protein TTHERM_00035460 [Tetrahymena thermophila
SB210]
Length = 403
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
P+ IVN+Y+ + H D E + P+ SF+ G S FL GD +
Sbjct: 242 PEAVIVNYYDKKNYMSGHLDDGEK----DQKSPIFSFTFGCSCIFLMGDRTKDFTPLPLR 297
Query: 409 LESGDVLIFGGESRHVFHGVSSINPNSAPGALLE 442
L++GD++I G SR+ +HGV I P S P E
Sbjct: 298 LDAGDLMIMSGYSRNCYHGVPRIFPGSFPKEEFE 331
>gi|395330201|gb|EJF62585.1| hypothetical protein DICSQDRAFT_179896 [Dichomitus squalens
LYAD-421 SS1]
Length = 460
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 349 PDICIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVL 408
PD IVNFY T L H DR E + P+VS S+G +A FL G + +L
Sbjct: 323 PDAGIVNFYQTKDTLMAHADRSE----ICATSPLVSISLGCAAVFLIGGLTRDDPPTPIL 378
Query: 409 LESGDVLIFGGES-RHVFHGVSSI 431
L SGD ++ G + R +HGV I
Sbjct: 379 LRSGDAVVMSGPACRRAYHGVPRI 402
>gi|307171459|gb|EFN63303.1| Alkylated DNA repair protein alkB-like protein 1 [Camponotus
floridanus]
Length = 306
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 352 CIVNFYNTSGRLGLHQDRDESRYSLKKGLPVVSFSVGDSAEFLYGDERDANKAEKVLLES 411
IVN+Y + L H D E + P+ S S G +A FL G + + A + L S
Sbjct: 177 AIVNYYRMNSTLAGHTDHSE----MNITAPLFSISFGQTAIFLIGGPKQEDPANAIFLRS 232
Query: 412 GDVLIFGGESRHVFHGVSSI 431
GDV+I G SR +HGV I
Sbjct: 233 GDVIIMSGNSRLRYHGVPKI 252
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,618,989,553
Number of Sequences: 23463169
Number of extensions: 336364717
Number of successful extensions: 749176
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 265
Number of HSP's that attempted gapping in prelim test: 746668
Number of HSP's gapped (non-prelim): 1242
length of query: 458
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 312
effective length of database: 8,933,572,693
effective search space: 2787274680216
effective search space used: 2787274680216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)