Query 012688
Match_columns 458
No_of_seqs 134 out of 1216
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 14:19:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012688.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012688hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bgh_A Vinorine synthase; VS, 100.0 9.4E-78 3.2E-82 618.0 39.1 406 7-452 1-420 (421)
2 4g22_A Hydroxycinnamoyl-COA sh 100.0 4.6E-77 1.6E-81 616.1 41.6 404 7-437 4-434 (439)
3 2e1v_A Acyl transferase; BAHD 100.0 7.3E-71 2.5E-75 572.3 35.1 407 5-444 1-449 (454)
4 2xr7_A Malonyltransferase; xen 100.0 5.8E-71 2E-75 573.0 31.5 403 11-445 2-450 (453)
5 2rkv_A Trichothecene 3-O-acety 100.0 7.4E-63 2.5E-67 511.9 31.9 392 31-446 4-448 (451)
6 1q9j_A PAPA5, polyketide synth 98.9 2.3E-07 8E-12 93.6 23.4 275 30-336 6-314 (422)
7 2jgp_A Tyrocidine synthetase 3 98.5 2E-05 6.7E-10 82.0 24.4 242 75-336 133-401 (520)
8 1l5a_A Amide synthase, VIBH; n 98.4 6.2E-05 2.1E-09 76.1 24.8 243 75-336 35-305 (436)
9 4hvm_A Tlmii; PSI-biology, mid 98.2 3.1E-05 1.1E-09 79.9 18.1 247 75-336 49-328 (493)
10 2xhg_A Tyrocidine synthetase A 98.2 0.00098 3.4E-08 67.8 27.0 277 30-336 16-336 (466)
11 2vsq_A Surfactin synthetase su 98.0 0.00097 3.3E-08 77.1 25.0 247 75-336 49-328 (1304)
12 3fot_A 15-O-acetyltransferase; 97.2 0.0057 1.9E-07 63.5 15.2 154 161-315 177-365 (519)
13 3cla_A Type III chloramphenico 60.8 5.4 0.00018 35.8 3.3 44 147-190 164-209 (213)
14 2i9d_A Chloramphenicol acetylt 59.3 5.9 0.0002 35.7 3.3 43 147-189 172-216 (217)
15 1q23_A Chloramphenicol acetylt 58.6 6.2 0.00021 35.6 3.3 44 147-190 168-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 56.5 7.6 0.00026 35.5 3.5 29 162-190 204-232 (239)
17 1scz_A E2, dihydrolipoamide su 53.6 8.3 0.00028 35.1 3.3 30 162-191 196-225 (233)
18 1dpb_A Dihydrolipoyl-transacet 53.6 8.2 0.00028 35.4 3.3 29 162-190 208-236 (243)
19 3rqc_A Probable lipoamide acyl 53.5 7.2 0.00025 35.3 2.8 30 162-191 187-216 (224)
20 2ii3_A Lipoamide acyltransfera 51.9 9 0.00031 35.6 3.3 29 162-190 224-252 (262)
21 2xl1_A Arginine attenuator pep 46.1 11 0.00038 20.7 1.7 18 254-271 7-24 (26)
22 3mae_A 2-oxoisovalerate dehydr 45.5 13 0.00045 34.3 3.3 30 162-191 210-239 (256)
23 3l60_A Branched-chain alpha-ke 44.0 14 0.00049 33.9 3.3 30 162-191 205-234 (250)
24 2k1o_A Putative; repressor, tr 39.8 58 0.002 22.4 4.8 44 231-277 14-57 (66)
25 1x93_A Hypothetical protein HP 31.2 48 0.0017 21.9 3.2 39 233-274 2-40 (55)
26 3dva_I Dihydrolipoyllysine-res 26.5 14 0.00047 36.9 0.0 29 162-190 391-419 (428)
No 1
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=9.4e-78 Score=618.01 Aligned_cols=406 Identities=34% Similarity=0.579 Sum_probs=343.4
Q ss_pred CcceEEEEeeeEeeCCCCCCCCCCcccCCcccCCCCCCCceEEEEecCCCCCCccccccccccchhhhHHHHHHHHHHhc
Q 012688 7 KEMKVEIISKETIKPSSPTPNHLKDYKLSLLDQIAPPSYETLLLFYSFNGDDDRQHHHHISVYKANKLSLQLKQSLSETL 86 (458)
Q Consensus 7 ~~~~V~~~~~~~V~p~~~~~~~~~~~~Ls~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L 86 (458)
|.|+|+|+++++|+|+.|+|.+.+.++||+||++.++.|++.++||+.++..+ ++....+++||+||+++|
T Consensus 1 m~m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~---------~~~~~~~~~Lk~sLs~~L 71 (421)
T 2bgh_A 1 MAPQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSN---------LDPAQTSQHLKQSLSKVL 71 (421)
T ss_dssp ---CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCC---------CCHHHHHHHHHHHHHHHT
T ss_pred CCceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccc---------cchhhHHHHHHHHHHHHh
Confidence 44789999999999999988766789999999987889999999999764310 135678999999999999
Q ss_pred ccccCCCceecCCceEEcCCCCeeEEEEEeccChHHhhCC-CCcchhcccCCCcccCC-----CCCcceEEEEEEEEecC
Q 012688 87 TRFYPLAGRVKDNITIDCSDHGAVYVEAQVNCLLQDLLKQ-PNGDSVIQLVPIQLAEE-----SKPGLLLFVQSSFFTCG 160 (458)
Q Consensus 87 ~~~p~LaGrl~~~~~i~~~~~gv~~~~a~~d~~~~dl~~~-p~~~~~~~l~p~~~~~~-----~~~~Pll~vQvt~~~cG 160 (458)
++||+|||||+++++|+|+++||.|++|++|++++|+.+. |+...++.|+|... .. ..+.|++.+|+|+|+||
T Consensus 72 ~~~~plAGRl~~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~-~~~~~~~~~~~pll~vQvt~f~cg 150 (421)
T 2bgh_A 72 THFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAA-YPGGKIEVNEDVPLAVKISFFECG 150 (421)
T ss_dssp TTSGGGGSEEETTTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCS-SSSSSSCCCTTCSEEEEEEECTTS
T ss_pred hhcchhccccCCCcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCC-CccccccccCCceEEEEEEEEcCC
Confidence 9999999999988999999999999999999999999875 66556778888762 22 23489999999999999
Q ss_pred cEEEEeceeeeecchhhHHHHHHHHHHHhcCCCCCCCCCcccc-ccCCCC-CCcchhhhccCCCCccccccCceeEEEEE
Q 012688 161 GVAIGVCISHKIADAATVVTFIRSWAGAAAGDHRRVYYPSYNA-SSLFPP-RDVTATAMLFLNPPFNMAMKEKCFTKRFV 238 (458)
Q Consensus 161 G~iL~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~P~~dr-~~l~~~-~~~p~~~~~~~p~~~~~~~~~~~~~~~f~ 238 (458)
|++||+++||.++||.|+++|+++||++|||...+ ..|.+|| +.+.++ ++.|. + ++. ...++..++|+
T Consensus 151 G~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~-~~P~~dr~~~l~p~~~~~~~------~-~~~--~~~~~~~~~f~ 220 (421)
T 2bgh_A 151 GTAIGVNLSHKIADVLSLATFLNAWTATCRGETEI-VLPNFDLAARHFPPVDNTPS------P-ELV--PDENVVMKRFV 220 (421)
T ss_dssp CEEEEEEEETTTCCHHHHHHHHHHHHHHHTTCSCC-CCCBCSHHHHHSCCCTTCCC------C-CCC--CCSSEEEEEEE
T ss_pred CEEEEEEeeEEechHHHHHHHHHHHHHHhcCCCCC-CCCccccccccCCCcccCCC------C-ccC--CccceEEEEEE
Confidence 99999999999999999999999999999997644 6789998 767655 44331 1 121 34578899999
Q ss_pred EchHhHHHHHHHhc-----CCCChhhHHHHHHHHHHHhhhcCCCCCCceeEEEEEeeCCCCCCCCCCcCCcccceeeeee
Q 012688 239 FYGPKIAALEAALS-----APSTRGEAVTALIWKCAVNASRSNSGVSKLSILSRSVDIRKITVPPLPDNSVGNLVGYYAS 313 (458)
Q Consensus 239 fs~~~l~~Lk~~~~-----~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~v~~~~~ 313 (458)
|++++|++||+++. .++|++|+|+|++|+|++|||....++++.+.+.++||+|+|++||+|.+||||++..+.+
T Consensus 221 f~~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~~ 300 (421)
T 2bgh_A 221 FDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFA 300 (421)
T ss_dssp ECHHHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEEEEE
T ss_pred ECHHHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEEEEE
Confidence 99999999999987 4699999999999999999987533334689999999999999999999999999999998
Q ss_pred eccCC-cccHHHHHHHHHHHHHhhhHHHHHhhhchHHHHHHHHHHHHHhhhhccCCCCeEEEeccCCCCCcccccCCCcc
Q 012688 314 QKDES-DIQLQGLVRELREGIQDFSKSYLQKLQREDALEAITESCKDAIAILISNDVDLYVCNSLCDVSLYDIDFGWGNP 392 (458)
Q Consensus 314 ~~~~~-~~~L~~vA~~iR~ai~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~G~P 392 (458)
.++++ +.+|+++|.+||++++++++++++.+.+ +.+..... +..+.+++|||.++++|++|||||+|
T Consensus 301 ~~~~~~~~~l~~~a~~ir~ai~~~~~~~~~~~~~----------~~~~~~~~--~~~~~~~vssw~~~~~y~~DFGwGkP 368 (421)
T 2bgh_A 301 AVDAEWDKDFPDLIGPLRTSLEKTEDDHNHELLK----------GMTCLYEL--EPQELLSFTSWCRLGFYDLDFGWGKP 368 (421)
T ss_dssp EECTTCCCCGGGGHHHHHHHTCCCSSCHHHHHHH----------HHHHHHTS--CGGGEEEEEEETTSCGGGCCSSSCCC
T ss_pred EecccccccHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHhhcc--CCCCeEEEeccccCCCcccccCCCcc
Confidence 88876 7899999999999999999888875433 22211111 12346999999999999999999999
Q ss_pred eeeeeccCCCCCCccEEEEEeCCCCCccEEEEEecCHHHHHhhhcChhhhhhhhcCCCcc
Q 012688 393 TWVTNISSNAPNHKNLVGLIDSSTGDGSIEAWVTLSEADMALFERDPDLLCYAATFDYPS 452 (458)
Q Consensus 393 ~~v~~~~~~~~~~~g~~~i~p~~~g~G~~ev~v~L~~e~m~~l~~d~~~~~~~~~~~~~~ 452 (458)
+++++... +. +|+++++|+++++| ++|.|+|++++|++|++ ||.+|++ .||+
T Consensus 369 ~~v~~~~~-~~--~g~~~~~p~~~~~g-i~v~v~L~~~~m~~f~~--e~~~~~~--~~~~ 420 (421)
T 2bgh_A 369 LSACTTTF-PK--RNAALLMDTRSGDG-VEAWLPMAEDEMAMLPV--ELLSLVD--SDFS 420 (421)
T ss_dssp SEEECCCC-CS--TTEEEEEECTTSSS-EEEEEEEEHHHHHHSCH--HHHTTBC--CCCC
T ss_pred Ceeccccc-Cc--CCEEEEEecCCCCe-EEEEEEcCHHHHHHHHH--HHHHhhc--CCCC
Confidence 99998765 55 79999999988765 99999999999999998 9999999 9986
No 2
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=4.6e-77 Score=616.07 Aligned_cols=404 Identities=25% Similarity=0.378 Sum_probs=330.4
Q ss_pred CcceEEEEeeeEeeCCCCCCCCCCcccCCcccCCCCCCCceEEEEecCCCCCCccccccccccchhhhHHHHHHHHHHhc
Q 012688 7 KEMKVEIISKETIKPSSPTPNHLKDYKLSLLDQIAPPSYETLLLFYSFNGDDDRQHHHHISVYKANKLSLQLKQSLSETL 86 (458)
Q Consensus 7 ~~~~V~~~~~~~V~p~~~~~~~~~~~~Ls~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L 86 (458)
++|+|+|+++++|+|+.++|. +.++||+||++.++.|++.+|||+.+... ....+++||+||+++|
T Consensus 4 ~~~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~~------------~~~~~~~Lk~sLs~~L 69 (439)
T 4g22_A 4 GSMKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGSS------------NFFDAKVLKDALSRAL 69 (439)
T ss_dssp --CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCSCT------------TTTCHHHHHHHHHHHT
T ss_pred CceEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCCCc------------cccHHHHHHHHHHHHH
Confidence 358899999999999999875 47999999999889999999999975431 2346899999999999
Q ss_pred ccccCCCceec----CCceEEcCCCCeeEEEEEeccChHHhhCCCCcchhcccCCCcccCCC-CCcceEEEEEEEEecCc
Q 012688 87 TRFYPLAGRVK----DNITIDCSDHGAVYVEAQVNCLLQDLLKQPNGDSVIQLVPIQLAEES-KPGLLLFVQSSFFTCGG 161 (458)
Q Consensus 87 ~~~p~LaGrl~----~~~~i~~~~~gv~~~~a~~d~~~~dl~~~p~~~~~~~l~p~~~~~~~-~~~Pll~vQvt~~~cGG 161 (458)
++||+|||||+ ++++|+||++||.|+||++|++++|+....+...++.|+|......+ .+.|++.+|+|+|+|||
T Consensus 70 ~~f~plAGRl~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG 149 (439)
T 4g22_A 70 VPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYSQGISSYALLVLQVTYFKCGG 149 (439)
T ss_dssp TTTGGGGCEEEECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTTSCTTSSCSEEEEEEECTTSC
T ss_pred hhccccceeeeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCcccccccCceeEEEEEEecCCC
Confidence 99999999997 37999999999999999999999999763223356788886543323 34899999999999999
Q ss_pred EEEEeceeeeecchhhHHHHHHHHHHHhcCCCCCCCCCccccccCCCCCCcchh---hhccCCCC-ccc------ccc-C
Q 012688 162 VAIGVCISHKIADAATVVTFIRSWAGAAAGDHRRVYYPSYNASSLFPPRDVTAT---AMLFLNPP-FNM------AMK-E 230 (458)
Q Consensus 162 ~iL~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~P~~dr~~l~~~~~~p~~---~~~~~p~~-~~~------~~~-~ 230 (458)
++||+++||.++||.|+++|+++||++|||.. ...+|++||+.+.. +++|.. ...|.+.+ ... ... .
T Consensus 150 ~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~rg~~-~~~~P~~dr~~l~~-~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (439)
T 4g22_A 150 VSLGVGMRHHAADGFSGLHFINSWSDMARGLD-VTLPPFIDRTLLRA-RDPPQPQFQHIEYQPPPALAVSPQTAASDSVP 227 (439)
T ss_dssp EEEEEEECTTTCCHHHHHHHHHHHHHHHTTCC-CSSCCBCCGGGGCC-CSSCCCSSCCGGGSCCC---------------
T ss_pred EEEEEEeeeccCcHHHHHHHHHHHHHHhCCCC-CCCCCccccccccC-CCCCCCCcCcccccCCCCCcccccccccCCcc
Confidence 99999999999999999999999999999986 36789999986542 233321 11332211 100 112 5
Q ss_pred ceeEEEEEEchHhHHHHHHHhc-----CCCChhhHHHHHHHHHHHhhhcCCCCCCceeEEEEEeeCCCCCCCCCCcCCcc
Q 012688 231 KCFTKRFVFYGPKIAALEAALS-----APSTRGEAVTALIWKCAVNASRSNSGVSKLSILSRSVDIRKITVPPLPDNSVG 305 (458)
Q Consensus 231 ~~~~~~f~fs~~~l~~Lk~~~~-----~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~G 305 (458)
++..++|+|++++|++||+++. .++|++|+|+||+|||++|||...+ ++.+.+.++||+|+|++||+|++|||
T Consensus 228 ~~~~~~f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~--~~~~~l~~~vd~R~rl~Pplp~~Y~G 305 (439)
T 4g22_A 228 ETAVSIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEV--DQGTKLYIATDGRARLRPSLPPGYFG 305 (439)
T ss_dssp CEEEEEEEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCT--TCEEEEEEEEECTTTSSSCCCTTBCS
T ss_pred cceEEEEEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCC--CCcEEEEEEEcccCCCCCCCCCCccc
Confidence 7899999999999999999986 4699999999999999999998644 57899999999999999999999999
Q ss_pred cceeeeeeeccCC---cccHHHHHHHHHHHHHhhhHHHHHhhhchHHHHHHHHHHHHHh---hhhccCCCCeEEEeccCC
Q 012688 306 NLVGYYASQKDES---DIQLQGLVRELREGIQDFSKSYLQKLQREDALEAITESCKDAI---AILISNDVDLYVCNSLCD 379 (458)
Q Consensus 306 N~v~~~~~~~~~~---~~~L~~vA~~iR~ai~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ssw~~ 379 (458)
|++..+.+.++++ +.+|+++|.+||+++++++++++++.++ +++...+.. ......+...+++|||.+
T Consensus 306 N~v~~~~~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~vssw~r 379 (439)
T 4g22_A 306 NVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALD------YLELQPDLKALVRGAHTFKCPNLGITSWVR 379 (439)
T ss_dssp CCEEEECCEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHH------HHHTCSCSTTCCCCHHHHCTTCEEEEECTT
T ss_pred ceeehhhcceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHH------HHHhCccchhhcccCCcCcCCcEEEeecCc
Confidence 9999998888876 6799999999999999999999998765 333211100 111111123599999999
Q ss_pred CCCcccccCCCcceeeeeccCCCCCCccEEEEEeCCCCCccEEEEEecCHHHHHhhhc
Q 012688 380 VSLYDIDFGWGNPTWVTNISSNAPNHKNLVGLIDSSTGDGSIEAWVTLSEADMALFER 437 (458)
Q Consensus 380 ~~~y~~DFG~G~P~~v~~~~~~~~~~~g~~~i~p~~~g~G~~ev~v~L~~e~m~~l~~ 437 (458)
+++|++|||||+|+++++... +. +|.++++|+++++|+++|.|+|++++|++|++
T Consensus 380 ~~~y~~DFGwGkP~~~~~~~~-~~--~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~ 434 (439)
T 4g22_A 380 LPIHDADFGWGRPIFMGPGGI-AY--EGLSFILPSPTNDGSMSVAISLQGEHMKLFQS 434 (439)
T ss_dssp SCTTCCCCSSCCCSEEEESSC-CS--TTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred CCccccccCCCCcceeecccc-CC--CcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence 999999999999999998764 66 79999999987788899999999999999986
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=7.3e-71 Score=572.31 Aligned_cols=407 Identities=22% Similarity=0.322 Sum_probs=321.4
Q ss_pred ccCcceEEEEeeeEeeCCCCCCCCCCcccCCcccCCC-CCCCceEEEEecCCCCCCccccccccccc--hhhhHHHHHHH
Q 012688 5 KEKEMKVEIISKETIKPSSPTPNHLKDYKLSLLDQIA-PPSYETLLLFYSFNGDDDRQHHHHISVYK--ANKLSLQLKQS 81 (458)
Q Consensus 5 ~~~~~~V~~~~~~~V~p~~~~~~~~~~~~Ls~lD~~~-~~~y~~~~~~f~~~~~~~~~~~~~~~~~~--~~~~~~~L~~s 81 (458)
|+...+|+|+++++|+|+.++++ .+.++||+||+.. ...|++.++||+.++.. + .+.++++||+|
T Consensus 1 ~~~~~~v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~-----------~~~~~~~~~~Lk~s 68 (454)
T 2e1v_A 1 MASLPILTVLEQSQVSPPPDTLG-DKSLQLTFFDFFWLRSPPINNLFFYELPITR-----------SQFTETVVPNIKHS 68 (454)
T ss_dssp -----CEEEEEEEEECCCTTSCC-CEEEECCHHHHTTTTCCCEEEEEEEECCCCH-----------HHHHHTHHHHHHHH
T ss_pred CCCCceEEEEEEEEEeCCCCCCC-CceecCchHHhhhhccCCccEEEEEeCCCCc-----------chhhHHHHHHHHHH
Confidence 34457899999999999987544 3689999999974 45799999999976431 2 45679999999
Q ss_pred HHHhcccccCCCceec--C----CceEEcC-CCCeeEEEEEeccChHHhhCC-C-CcchhcccCCCcccCC---C-CCcc
Q 012688 82 LSETLTRFYPLAGRVK--D----NITIDCS-DHGAVYVEAQVNCLLQDLLKQ-P-NGDSVIQLVPIQLAEE---S-KPGL 148 (458)
Q Consensus 82 L~~~L~~~p~LaGrl~--~----~~~i~~~-~~gv~~~~a~~d~~~~dl~~~-p-~~~~~~~l~p~~~~~~---~-~~~P 148 (458)
|+++|++||+|||||+ + +++|+|+ ++||.|+||+++.+++++... + +...++.|+|...... + .+.|
T Consensus 69 Ls~~L~~~~plAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~p 148 (454)
T 2e1v_A 69 LSITLKHFYPFVGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIP 148 (454)
T ss_dssp HHHHHTTCGGGGSEEEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEE
T ss_pred HHHHhhhccccceeeeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCc
Confidence 9999999999999997 2 6899999 599999999999999999753 2 2345678888754211 1 2359
Q ss_pred eEEEEEEEEecCcEEEEeceeeeecchhhHHHHHHHHHHHhc-CCC-----CCCCCCccccccCCCCCCcchhh-hccC-
Q 012688 149 LLFVQSSFFTCGGVAIGVCISHKIADAATVVTFIRSWAGAAA-GDH-----RRVYYPSYNASSLFPPRDVTATA-MLFL- 220 (458)
Q Consensus 149 ll~vQvt~~~cGG~iL~~~~~H~v~Dg~g~~~fl~~wa~~~r-g~~-----~~~~~P~~dr~~l~~~~~~p~~~-~~~~- 220 (458)
++.+|+|+|+|||++||+++||.++||.|+++|+++||++|| |.. .+...|.+|| .+..+. +.... ..+.
T Consensus 149 ll~vQvT~f~cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~~p~-~~~~~~~~~~~ 226 (454)
T 2e1v_A 149 LFSVQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-IIKYPM-LDEAYLKRAKV 226 (454)
T ss_dssp CEEEEEEEETTTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCCCHH-HHHHHHHHTTC
T ss_pred eEEEEEEEecCCcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc-cCCCCC-cchHHHHhhhc
Confidence 999999999999999999999999999999999999999999 763 1246789999 553211 11000 0110
Q ss_pred --------CCCccccccCceeEEEEEEchHhHHHHHHHhc------CCCChhhHHHHHHHHHHHhhhcCCCCCCceeEEE
Q 012688 221 --------NPPFNMAMKEKCFTKRFVFYGPKIAALEAALS------APSTRGEAVTALIWKCAVNASRSNSGVSKLSILS 286 (458)
Q Consensus 221 --------p~~~~~~~~~~~~~~~f~fs~~~l~~Lk~~~~------~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~~l~ 286 (458)
+.... ...+...++|+|++++|++||+++. .++|++|+|+|++|||++||| + ++.+.+.
T Consensus 227 ~~~~~~~~~~~~~--~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~--~~~~~l~ 299 (454)
T 2e1v_A 227 ESFNEDYVTQSLA--GPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---N--DKLQLFG 299 (454)
T ss_dssp TTHHHHCCCCCCC--CCCCEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---C--CSEEEEE
T ss_pred cccccccCcccCC--CCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---C--CCceEEE
Confidence 11111 2346789999999999999999885 369999999999999999999 2 4789999
Q ss_pred EEeeCCCCCCCCCCcCCcccceeeeeeeccCC----cccHHHHHHHHHHHHHhhhHHHHHhhhchHHHHHHHHHHHHHhh
Q 012688 287 RSVDIRKITVPPLPDNSVGNLVGYYASQKDES----DIQLQGLVRELREGIQDFSKSYLQKLQREDALEAITESCKDAIA 362 (458)
Q Consensus 287 ~~vd~R~rl~p~lp~~Y~GN~v~~~~~~~~~~----~~~L~~vA~~iR~ai~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 362 (458)
++||+|+|++||+|.+||||++..+.+.++++ +.+|+++|.+||+++++++++|+++++... +.+|.+...
T Consensus 300 ~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~-----~~~~~~~~~ 374 (454)
T 2e1v_A 300 FPIDRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDD-----MESFNDLVS 374 (454)
T ss_dssp EEEECGGGSSSCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC----------CHHHH
T ss_pred EEecchhccCCCCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHH-----HHHHHHHHH
Confidence 99999999999999999999999998888776 379999999999999999877777665410 122333222
Q ss_pred hhccCCCCeEEEeccCCCCCcccccCCCcceeeeeccCCCCCCccEEEEEeCCCCCccEEEEEecCHHHHHhhhcChhhh
Q 012688 363 ILISNDVDLYVCNSLCDVSLYDIDFGWGNPTWVTNISSNAPNHKNLVGLIDSSTGDGSIEAWVTLSEADMALFERDPDLL 442 (458)
Q Consensus 363 ~~~~~~~~~~~~ssw~~~~~y~~DFG~G~P~~v~~~~~~~~~~~g~~~i~p~~~g~G~~ev~v~L~~e~m~~l~~d~~~~ 442 (458)
.+ . +...+++|||+++++|++|||||+|+++++... +. +|.++++|+++++|+++|.|+|++++|++|++ +|.
T Consensus 375 ~~-~-~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~-~~--~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~--~~~ 447 (454)
T 2e1v_A 375 EG-M-PTTMTWVSGTPKLRFYDMDFGWGKPKKLETVSI-DH--NGAISINSCKESNEDLEIGVCISATQMEDFVH--IFD 447 (454)
T ss_dssp HC-C-CSEEEEEECCTTSCGGGCCSSSCSCSEEEEGGG-GG--SSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH--HHH
T ss_pred hh-c-CCceEEEecCCCCCcccccccCccceEEEeeee-CC--CCeEEEEecCCCCCCEEEEEEECHHHHHHHHH--HHH
Confidence 22 1 223599999999999999999999999998765 45 78999999888888899999999999999965 676
Q ss_pred hh
Q 012688 443 CY 444 (458)
Q Consensus 443 ~~ 444 (458)
+.
T Consensus 448 ~~ 449 (454)
T 2e1v_A 448 DG 449 (454)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 4
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=5.8e-71 Score=572.97 Aligned_cols=403 Identities=21% Similarity=0.306 Sum_probs=323.6
Q ss_pred EEEEeeeEeeCCCCCCCCCCcccCCcccCCC-CCCCceEEEEecCCCCCCccccccccccc--hhhhHHHHHHHHHHhcc
Q 012688 11 VEIISKETIKPSSPTPNHLKDYKLSLLDQIA-PPSYETLLLFYSFNGDDDRQHHHHISVYK--ANKLSLQLKQSLSETLT 87 (458)
Q Consensus 11 V~~~~~~~V~p~~~~~~~~~~~~Ls~lD~~~-~~~y~~~~~~f~~~~~~~~~~~~~~~~~~--~~~~~~~L~~sL~~~L~ 87 (458)
|+|+++++|+|+.++++ .+.++||+||++. ...|++.+|||+.+... + .+.++++||+||+++|+
T Consensus 2 v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~-----------~~~~~~~~~~Lk~sLs~~L~ 69 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSAT-ELTLPLTYFDHVWLAFHRMRRILFYKLPISR-----------PDFVQTIIPTLKDSLSLTLK 69 (453)
T ss_dssp CEEEEESCCCCCTTCCS-EEEEECCHHHHGGGGSCCEEEEEEEECCCCS-----------HHHHHTHHHHHHHHHHHHHT
T ss_pred eEEEEEEEecCCCCCCC-CceECCCHHHhhhhhcCCccEEEEEeCCCCC-----------chhHHHHHHHHHHHHHHHhh
Confidence 89999999999987544 3689999999974 45799999999976431 2 45689999999999999
Q ss_pred cccCCCceec------CCceEEcC-CCCeeEEEEEeccChHHhhCC--CCcchhcccCCCcccCCCCC-----cceEEEE
Q 012688 88 RFYPLAGRVK------DNITIDCS-DHGAVYVEAQVNCLLQDLLKQ--PNGDSVIQLVPIQLAEESKP-----GLLLFVQ 153 (458)
Q Consensus 88 ~~p~LaGrl~------~~~~i~~~-~~gv~~~~a~~d~~~~dl~~~--p~~~~~~~l~p~~~~~~~~~-----~Pll~vQ 153 (458)
+||+|||||+ ++++|+|+ ++||.|+||++|.+++++... ++...++.|+|..... +.. .|++.+|
T Consensus 70 ~~~plAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~-~~~~~~~~~pll~vQ 148 (453)
T 2xr7_A 70 YYLPLAGNVACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEP-KDAPGVQLAPVLAIQ 148 (453)
T ss_dssp TSGGGGSCCEEESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCC-EEETTEEECCCEEEE
T ss_pred hccccCeeEEccCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCc-ccccccccCCeEEEE
Confidence 9999999995 26899999 599999999999999999752 2344567888875421 122 8999999
Q ss_pred EEEEecCcEEEEeceeeeecchhhHHHHHHHHHHHhc-CC-C---CCCCCCccccccCCCCCCcchhh-hcc-CCCCc-c
Q 012688 154 SSFFTCGGVAIGVCISHKIADAATVVTFIRSWAGAAA-GD-H---RRVYYPSYNASSLFPPRDVTATA-MLF-LNPPF-N 225 (458)
Q Consensus 154 vt~~~cGG~iL~~~~~H~v~Dg~g~~~fl~~wa~~~r-g~-~---~~~~~P~~dr~~l~~~~~~p~~~-~~~-~p~~~-~ 225 (458)
+|+|+|||++||+++||.++||.|+++|+++||++|| |. . .+...|.+||+.+.++..++... ..+ ..+.. .
T Consensus 149 vT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~~ 228 (453)
T 2xr7_A 149 VTLFPNHGISIGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKDPNGVGMSIWNEMKKYKHMMK 228 (453)
T ss_dssp EEEETTTEEEEEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCCSSCHHHHTTTTGGGCTTTSC
T ss_pred EEEccCCcEEEEEeeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCccccccccCCCCcchHHHHhccccCCccc
Confidence 9999999999999999999999999999999999999 76 2 13457899998877543322111 011 10111 0
Q ss_pred c---cccCceeEEEEEEchHhHHHHHHHhc------CCCChhhHHHHHHHHHHHhhhcCC--C-CCCceeEEEEEeeCCC
Q 012688 226 M---AMKEKCFTKRFVFYGPKIAALEAALS------APSTRGEAVTALIWKCAVNASRSN--S-GVSKLSILSRSVDIRK 293 (458)
Q Consensus 226 ~---~~~~~~~~~~f~fs~~~l~~Lk~~~~------~~~St~d~l~A~lW~~~~rAr~~~--~-~~~~~~~l~~~vd~R~ 293 (458)
. ....++..++|+|++++|++||+++. .++|+||+|+|++|||++|||... . ++++.+.+.++||+|+
T Consensus 229 ~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~ 308 (453)
T 2xr7_A 229 MSDVVTPPDKVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRA 308 (453)
T ss_dssp CSCCCCCCSCCCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTS
T ss_pred cccccCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccc
Confidence 0 12346778999999999999999885 369999999999999999999752 1 2357899999999999
Q ss_pred CCCCCCCcCCcccceeeeeeeccCC----cccHHHHHHHHHHHHHh--hhHH-HHHhhhchHHHHHHHHHHHHHhhhhcc
Q 012688 294 ITVPPLPDNSVGNLVGYYASQKDES----DIQLQGLVRELREGIQD--FSKS-YLQKLQREDALEAITESCKDAIAILIS 366 (458)
Q Consensus 294 rl~p~lp~~Y~GN~v~~~~~~~~~~----~~~L~~vA~~iR~ai~~--~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (458)
|++||+|.+||||++..+.+.++++ +.+|+++|.+||+++++ ++++ ++++ + +.+..+.+.
T Consensus 309 rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~----------~~~~~~~~~- 375 (453)
T 2xr7_A 309 QFNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--S----------WFKEYDKVD- 375 (453)
T ss_dssp CSSSCCCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--C----------TTSCCCCSC-
T ss_pred cCCCCCCcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--H----------HHHHHHhhc-
Confidence 9999999999999999998887775 47999999999999999 5677 8775 3 222222221
Q ss_pred CCCCeEEEeccCCCCCcccccCCCcceeeeeccCCCCCCcc--EEEEEeCCCCCccEEEEEecCHHHHHhhhcChhhhhh
Q 012688 367 NDVDLYVCNSLCDVSLYDIDFGWGNPTWVTNISSNAPNHKN--LVGLIDSSTGDGSIEAWVTLSEADMALFERDPDLLCY 444 (458)
Q Consensus 367 ~~~~~~~~ssw~~~~~y~~DFG~G~P~~v~~~~~~~~~~~g--~~~i~p~~~g~G~~ev~v~L~~e~m~~l~~d~~~~~~ 444 (458)
+...+++|||++|++|++|||||+|+++++... +. +| .++++|+++++|+++|.|+|++++|++|++ +|.+.
T Consensus 376 -~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~-~~--~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~--~~~~~ 449 (453)
T 2xr7_A 376 -AKRSLSVAGSPKLDLYAADFGWGRPEKLEFVSI-DN--DDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAA--MFTHG 449 (453)
T ss_dssp -GGGEEEECSCSSCCGGGCCCSSCSCSEEEEGGG-SS--CSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHH--HHHHH
T ss_pred -cCCcEEEeccccCCccccccCCCcceEEEeeee-cC--CCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHH--HHHHH
Confidence 123599999999999999999999999998765 55 78 888999888888899999999999999965 77654
Q ss_pred h
Q 012688 445 A 445 (458)
Q Consensus 445 ~ 445 (458)
.
T Consensus 450 ~ 450 (453)
T 2xr7_A 450 I 450 (453)
T ss_dssp H
T ss_pred h
Confidence 3
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=7.4e-63 Score=511.86 Aligned_cols=392 Identities=19% Similarity=0.196 Sum_probs=298.3
Q ss_pred cccCCcccCCC--CCCCceEEEEecCCCCCCccccccccccchhhhHHHHHHHHHHhcccccCCCceec--C-------C
Q 012688 31 DYKLSLLDQIA--PPSYETLLLFYSFNGDDDRQHHHHISVYKANKLSLQLKQSLSETLTRFYPLAGRVK--D-------N 99 (458)
Q Consensus 31 ~~~Ls~lD~~~--~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~--~-------~ 99 (458)
.++||.|||+. ++.|++.++||+.++.. +...++++||+||+++|++||+|||||+ + +
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~-----------~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~ 72 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSDSS-----------QYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGT 72 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSCGG-----------GHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCE
T ss_pred cccCChhhcCccccccceeEEEEEECCCCC-----------CHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCc
Confidence 36899999997 68999999999964321 3467899999999999999999999996 1 4
Q ss_pred ceEEcCCCCeeEEEEEecc-----ChHHhhC-CCCcchh--cccCCCccc--C----CCCCcceEEEEEEEEecCcEEEE
Q 012688 100 ITIDCSDHGAVYVEAQVNC-----LLQDLLK-QPNGDSV--IQLVPIQLA--E----ESKPGLLLFVQSSFFTCGGVAIG 165 (458)
Q Consensus 100 ~~i~~~~~gv~~~~a~~d~-----~~~dl~~-~p~~~~~--~~l~p~~~~--~----~~~~~Pll~vQvt~~~cGG~iL~ 165 (458)
++|+|++.++.|++++++. ++++|.. .+....+ ..|.|.... . ...+.|++.+|+|+| |||++||
T Consensus 73 ~~i~~~~~~~~~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg 151 (451)
T 2rkv_A 73 SFIVPFEDVPRVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILT 151 (451)
T ss_dssp EEEECCCSSCEEEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEE
T ss_pred EEEeecCCCCeEEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeee
Confidence 7888877776788888864 6888764 2221111 123332210 1 223489999999965 7999999
Q ss_pred eceeeeecchhhHHHHHHHHHHHhcCCCCCC---CCCccccccCCCCC--Ccch---hhhccCCCCc---cccccCceeE
Q 012688 166 VCISHKIADAATVVTFIRSWAGAAAGDHRRV---YYPSYNASSLFPPR--DVTA---TAMLFLNPPF---NMAMKEKCFT 234 (458)
Q Consensus 166 ~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~---~~P~~dr~~l~~~~--~~p~---~~~~~~p~~~---~~~~~~~~~~ 234 (458)
+++||.++||.|+++|+++||++|||...+. ..|++||+.+.+.. ..|. +...+.+.+. ......++..
T Consensus 152 ~~~~H~v~Dg~g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (451)
T 2rkv_A 152 VNGQHGAMDMVGQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASW 231 (451)
T ss_dssp EEEETTTCCHHHHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------CCEEE
T ss_pred eeehhccccHHHHHHHHHHHHHHhcCCCCCccccccccCchhhccccccccCCCccccccccCCCCCCCCCCCCCCCceE
Confidence 9999999999999999999999999975221 25889987665431 2221 1111221110 0113456889
Q ss_pred EEEEEchHhHHHHHHHhc-------CCCChhhHHHHHHHHHHHhhhcCCCCCCceeEEEEEeeCCCCCCCCCCcCCcccc
Q 012688 235 KRFVFYGPKIAALEAALS-------APSTRGEAVTALIWKCAVNASRSNSGVSKLSILSRSVDIRKITVPPLPDNSVGNL 307 (458)
Q Consensus 235 ~~f~fs~~~l~~Lk~~~~-------~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~ 307 (458)
++|+|++++|++||+++. .++|++|+|+|++|||++|||....++++.+.+.++||+|+|++ +|.+||||+
T Consensus 232 ~~f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~--lP~~y~GN~ 309 (451)
T 2rkv_A 232 AFFTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG--VSNNYPGLL 309 (451)
T ss_dssp EEEEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT--CCTTCCSCC
T ss_pred EEEEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC--CCCCCcccc
Confidence 999999999999999985 25999999999999999999832123357899999999999998 899999999
Q ss_pred eeeeeeeccCC---cccHHHHHHHHHHHHHhhhHHH-HHhhhchHHHHHHHHHHHHHhhhh--c--cCCCCeEEEeccCC
Q 012688 308 VGYYASQKDES---DIQLQGLVRELREGIQDFSKSY-LQKLQREDALEAITESCKDAIAIL--I--SNDVDLYVCNSLCD 379 (458)
Q Consensus 308 v~~~~~~~~~~---~~~L~~vA~~iR~ai~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~ssw~~ 379 (458)
+..+.+.++++ +.+|+++|.+||+++.+++.++ ++++++ +++...+ ...+ . ......+++|||++
T Consensus 310 ~~~~~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~ssw~~ 382 (451)
T 2rkv_A 310 QNMTYHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLAT------YLHNNPD-KSNVSLTADADPSTSVMLSSWAK 382 (451)
T ss_dssp EEEEEEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHH------HHHHCSC-CTTBCTTTTCCTTTCEEEEECTT
T ss_pred eeeecccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHH------HHhcCCC-ccccccccccCCCCCEEEecccc
Confidence 99998887776 6899999999999999998887 887655 4442211 1111 1 11123499999999
Q ss_pred CCCcccccC--CCcceeeeeccCCCCCCccEEEEEeCCCCCccEEEEEecCHHHHHhhhcChhhhhhhh
Q 012688 380 VSLYDIDFG--WGNPTWVTNISSNAPNHKNLVGLIDSSTGDGSIEAWVTLSEADMALFERDPDLLCYAA 446 (458)
Q Consensus 380 ~~~y~~DFG--~G~P~~v~~~~~~~~~~~g~~~i~p~~~g~G~~ev~v~L~~e~m~~l~~d~~~~~~~~ 446 (458)
+++|++||| ||+|++++.+..++. +|.++++|++. +|+++|.|+|++++|++|++|+||++|++
T Consensus 383 ~~~y~~DFG~gwG~P~~v~~~~~~~~--~g~~~~~p~~~-~ggi~v~v~L~~~~m~~f~~d~ef~~~~~ 448 (451)
T 2rkv_A 383 VGLWDYDFGLGLGKPETVRRPIFEPV--ESLMYFMPKKP-DGEFCAALSLRDEDMDRLKADKEWTKYAQ 448 (451)
T ss_dssp CCGGGCCTTCSSCSCSEEECCBCSCC--TTEEEECCCCT-TSCEEEEEEEEHHHHHHHHHCHHHHTTCE
T ss_pred CCccccccCCCCCCceEEEcCCccCC--CCEEEEecCCC-CCCEEEEEEeCHHHHHHHhcCHHHHhhhe
Confidence 999999998 799999986654245 78999998644 67799999999999999999999999987
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.89 E-value=2.3e-07 Score=93.60 Aligned_cols=275 Identities=13% Similarity=0.087 Sum_probs=156.5
Q ss_pred CcccCCcccCCCC--CCCceEEEEecCCCCCCccccccccccchhhhHHHHHHHHHHhcccccCCCceec--C-C-ceEE
Q 012688 30 KDYKLSLLDQIAP--PSYETLLLFYSFNGDDDRQHHHHISVYKANKLSLQLKQSLSETLTRFYPLAGRVK--D-N-ITID 103 (458)
Q Consensus 30 ~~~~Ls~lD~~~~--~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~--~-~-~~i~ 103 (458)
..+|||++.+.+. .+.+...+-++.+.+ .++|++++.+++..+|.|-.++. + . .++.
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~g~ld-----------------~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v 68 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLRGVID-----------------VDALSDAFDALLETHPVLASHLEQSSDGGWNLV 68 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEESCCC-----------------HHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEE
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEecCCC-----------------HHHHHHHHHHHHHhCccceEEEEecCCcceeee
Confidence 4689998886432 233444444544332 68999999999999999999885 1 1 1222
Q ss_pred cCCCCee-EEEEEeccChHHhhCCCCcchhcccCCCcccCCCCCcceEEEEEEEEecCcEEEEeceeeeecchhhHHHHH
Q 012688 104 CSDHGAV-YVEAQVNCLLQDLLKQPNGDSVIQLVPIQLAEESKPGLLLFVQSSFFTCGGVAIGVCISHKIADAATVVTFI 182 (458)
Q Consensus 104 ~~~~gv~-~~~a~~d~~~~dl~~~p~~~~~~~l~p~~~~~~~~~~Pll~vQvt~~~cGG~iL~~~~~H~v~Dg~g~~~fl 182 (458)
....... +. ..|+........... ... .-+...|++.+.+.. ..++..|.+.+||.++||.|+..|+
T Consensus 69 ~~~~~~~~~~-------~~d~~~~~~~~~~~~---~~~-~~d~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~ 136 (422)
T 1q9j_A 69 ADDLLHSGIC-------VIDGTAATNGSPSGN---AEL-RLDQSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLV 136 (422)
T ss_dssp ECCSSSCCCE-------EEC---------------CCC-CCCTTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHH
T ss_pred ccCCCCCceE-------EEECCCCCcchhhhc---ccC-ccCCCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHH
Confidence 2211111 11 111111000000100 000 112347888888777 6788999999999999999999999
Q ss_pred HHHHHHhcC----CCCCCCCC-cc-c--------cccCCC-CCCcc---hhhh--ccCC-CCc----cccccCceeEEEE
Q 012688 183 RSWAGAAAG----DHRRVYYP-SY-N--------ASSLFP-PRDVT---ATAM--LFLN-PPF----NMAMKEKCFTKRF 237 (458)
Q Consensus 183 ~~wa~~~rg----~~~~~~~P-~~-d--------r~~l~~-~~~~p---~~~~--~~~p-~~~----~~~~~~~~~~~~f 237 (458)
+.|.+.+++ ......+| .+ + +..... ..... +..+ ...+ .+. ............+
T Consensus 137 ~~l~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~ 216 (422)
T 1q9j_A 137 DELFSRYTDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRL 216 (422)
T ss_dssp HHHHHHHHHHHHSSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCCCCEEEE
T ss_pred HHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceEE
Confidence 999999872 22111111 11 1 000000 00000 0100 1110 000 0011222456788
Q ss_pred EEchHhHHHHHHHhc-CCCChhhHHHHHHHHHHHhhhcCCCCCCceeEEEEEeeCCCCCCCCCCcCCcccceeeeeeecc
Q 012688 238 VFYGPKIAALEAALS-APSTRGEAVTALIWKCAVNASRSNSGVSKLSILSRSVDIRKITVPPLPDNSVGNLVGYYASQKD 316 (458)
Q Consensus 238 ~fs~~~l~~Lk~~~~-~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~v~~~~~~~~ 316 (458)
.++.+..++|++.|. ..+|.++++.|.+-..+.|-+.. . .....+.++++.|....|+++..=+.|.+.+....++
T Consensus 217 ~l~~~~~~~l~~~a~~~~~t~~~~l~aa~~~~l~r~~~~-~--~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f~n~lp 293 (422)
T 1q9j_A 217 WLSKQQTSDLMAFGREHRLSLNAVVAAAILLTEWQLRNT-P--HVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAE 293 (422)
T ss_dssp CCCHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHTC-S--SCCEEEEEEEETTTTSSSCCCTTTBSCCEEEEEEEEC
T ss_pred EeCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccC-C--CceEEEeeeeecccccCCCCChhhhhhhheeeeeeee
Confidence 899999999999987 57999999999877777765221 1 2567889999999987655432223444444444444
Q ss_pred CC-cccHHHHHHHHHHHHHhh
Q 012688 317 ES-DIQLQGLVRELREGIQDF 336 (458)
Q Consensus 317 ~~-~~~L~~vA~~iR~ai~~~ 336 (458)
.. ..++.++...+++.+.+.
T Consensus 294 ~~~~~~~~~~l~~v~~~~~~~ 314 (422)
T 1q9j_A 294 IGPNTDIVDLASDIVATLRAD 314 (422)
T ss_dssp CCSSCCHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHH
Confidence 44 457777888877777653
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.51 E-value=2e-05 Score=82.00 Aligned_cols=242 Identities=11% Similarity=0.010 Sum_probs=147.3
Q ss_pred HHHHHHHHHHhcccccCCCceec--C-C-ceEEcCCCCeeEEEEEeccChHHhhCCCCcchhcccCCCcccCCC-CCcce
Q 012688 75 SLQLKQSLSETLTRFYPLAGRVK--D-N-ITIDCSDHGAVYVEAQVNCLLQDLLKQPNGDSVIQLVPIQLAEES-KPGLL 149 (458)
Q Consensus 75 ~~~L~~sL~~~L~~~p~LaGrl~--~-~-~~i~~~~~gv~~~~a~~d~~~~dl~~~p~~~~~~~l~p~~~~~~~-~~~Pl 149 (458)
.++|++++..++.++|.|--++. + . .++........+.+. +.+-+++.. ..+.+ - .+ -+ ...|+
T Consensus 133 ~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~~~~--~~~~~~~~~-----~~~~~-~-~~--fdl~~~pl 201 (520)
T 2jgp_A 133 RTRVEAAFQRLIARHESLRTSFAVVNGEPVQNIHEDVPFALAYS--EVTEEEARE-----LVSSL-V-QP--FDLEVAPL 201 (520)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEEEETTEEEEEECSCCCCCCEEE--ECCHHHHHH-----HHHHT-C-CC--CCTTSSCC
T ss_pred HHHHHHHHHHHHHHhHhheeEEEeeCCEEEEEECCCCCCceEEE--eCCHHHHHH-----HHHHh-c-CC--CCCCCCcc
Confidence 79999999999999999998875 2 1 122122111222111 111111111 00000 0 00 11 13688
Q ss_pred EEEEEEEEecCcEEEEeceeeeecchhhHHHHHHHHHHHhcCCCCCCCCCcc-c-----cccCCCCCCcch--hhh----
Q 012688 150 LFVQSSFFTCGGVAIGVCISHKIADAATVVTFIRSWAGAAAGDHRRVYYPSY-N-----ASSLFPPRDVTA--TAM---- 217 (458)
Q Consensus 150 l~vQvt~~~cGG~iL~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~P~~-d-----r~~l~~~~~~p~--~~~---- 217 (458)
+.+.+.....+...|.+.+||.++||.|+..|++.+.+.++|...+..++.+ | +...... .... ..+
T Consensus 202 ~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~~~l~~~~~~~~d~~~~~~~~~~~~-~~~~~~~yW~~~l 280 (520)
T 2jgp_A 202 IRVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQGDVLPELRIQYKDFAVWQQEFSQSA-AFHKQEAYWLQTF 280 (520)
T ss_dssp EEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHTTCCCCCCSCCHHHHHHHHHHHTTSH-HHHHHHHHHHHHT
T ss_pred eeEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcCh-hhHHHHHHHHHHh
Confidence 8777777665778999999999999999999999999999986421111111 1 1000000 0000 000
Q ss_pred -ccCC-CCcc------ccccCceeEEEEEEchHhHHHHHHHhc-CCCChhhHHHHHHHHHHHhhhcCCCCCCceeEEEEE
Q 012688 218 -LFLN-PPFN------MAMKEKCFTKRFVFYGPKIAALEAALS-APSTRGEAVTALIWKCAVNASRSNSGVSKLSILSRS 288 (458)
Q Consensus 218 -~~~p-~~~~------~~~~~~~~~~~f~fs~~~l~~Lk~~~~-~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~~l~~~ 288 (458)
..++ ..++ ...........+.++.+..++|++.|. ..+|.+.++.|.+-..+.+--+ .....+.++
T Consensus 281 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~~~T~~~~l~aa~a~~L~~~~~-----~~dv~~g~~ 355 (520)
T 2jgp_A 281 ADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKALTEGLHQLAQATGTTLYMVLLAAYNVLLAKYAG-----QEDIIVGTP 355 (520)
T ss_dssp SSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHT-----CSCEEEEEE
T ss_pred CCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-----CCCeEEEec
Confidence 1111 0111 011223456778899999999998886 5799999998877666666543 245789999
Q ss_pred eeCCCCCCCCCCcCCcccceeeeeeeccCC-cccHHHHHHHHHHHHHhh
Q 012688 289 VDIRKITVPPLPDNSVGNLVGYYASQKDES-DIQLQGLVRELREGIQDF 336 (458)
Q Consensus 289 vd~R~rl~p~lp~~Y~GN~v~~~~~~~~~~-~~~L~~vA~~iR~ai~~~ 336 (458)
++.|..- --.+-.|+.+.......... +.++.++...+++.+.+.
T Consensus 356 ~~gR~~~---~~~~~vG~f~n~lplr~~~~~~~~~~~~l~~v~~~~~~~ 401 (520)
T 2jgp_A 356 ITGRSHA---DLEPIVGMFVNTLAMRNKPQREKTFSEFLQEVKQNALDA 401 (520)
T ss_dssp ECCCCSG---GGTTCCSCCCEEEEEEECCCTTSBHHHHHHHHHHHHHHH
T ss_pred cCCCCch---hhhccEEeeeeeeeEEecCCCCCCHHHHHHHHHHHHHHH
Confidence 9999752 23467888877777777665 668888888888877653
No 8
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.41 E-value=6.2e-05 Score=76.09 Aligned_cols=243 Identities=12% Similarity=0.016 Sum_probs=145.5
Q ss_pred HHHHHHHHHHhcccccCCCceecC--CceEEcCCCCeeEEEEEeccChHHhhCCCCc-chhcccCCCcc-cCCC-CCcce
Q 012688 75 SLQLKQSLSETLTRFYPLAGRVKD--NITIDCSDHGAVYVEAQVNCLLQDLLKQPNG-DSVIQLVPIQL-AEES-KPGLL 149 (458)
Q Consensus 75 ~~~L~~sL~~~L~~~p~LaGrl~~--~~~i~~~~~gv~~~~a~~d~~~~dl~~~p~~-~~~~~l~p~~~-~~~~-~~~Pl 149 (458)
.++|++++..++..+|.|--++.. . .+. ......+.+ .|+...++. ..+..++-... ..-+ ...|+
T Consensus 35 ~~~L~~A~~~lv~rh~~LRt~f~~~~~-~v~-~~~~~~~~~-------~d~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl 105 (436)
T 1l5a_A 35 TTLLLRALHLTVSEIDLFRARFSAQGE-LYW-HPFSPPIDY-------QDLSIHLEAEPLAWRQIEQDLQRSSTLIDAPI 105 (436)
T ss_dssp HHHHHHHHHHHHHTCGGGGEEECTTCC-EEE-CSSCCCCEE-------EECTTCTTHHHHHHHHHHHHHTSCCCCBTSCS
T ss_pred HHHHHHHHHHHHHHhheeEEEEEecCC-eEC-CCcCCCccE-------EeCCCCCCHHHHHHHHHHHHhcCCCCcCCCCC
Confidence 789999999999999999988862 2 111 111111111 111111110 00110000000 0011 13588
Q ss_pred EEEEEEEEecCcEEEEeceeeeecchhhHHHHHHHHHHHhc----CCCCCCCCCccc------cccCCCCCCcch--hhh
Q 012688 150 LFVQSSFFTCGGVAIGVCISHKIADAATVVTFIRSWAGAAA----GDHRRVYYPSYN------ASSLFPPRDVTA--TAM 217 (458)
Q Consensus 150 l~vQvt~~~cGG~iL~~~~~H~v~Dg~g~~~fl~~wa~~~r----g~~~~~~~P~~d------r~~l~~~~~~p~--~~~ 217 (458)
+.+.+.....+...|.+.+||.++||.|+..|++.+.+.++ |...+...+.+. +..+... .... ..+
T Consensus 106 ~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~W 184 (436)
T 1l5a_A 106 TSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKPYQSYLEEEAAYLTSH-RYWQDKQFW 184 (436)
T ss_dssp CEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCHHHHHHHHHHHHTSH-HHHHHHHHH
T ss_pred eEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhccH-hHHHHHHHH
Confidence 87777666657899999999999999999999999999987 443111111111 0000000 0000 001
Q ss_pred -----ccCCC-Ccc---ccccCceeEEEEEEchHhHHHHHHHhc-CCCChhhHHHHHHHHHHHhhhcCCCCCCceeEEEE
Q 012688 218 -----LFLNP-PFN---MAMKEKCFTKRFVFYGPKIAALEAALS-APSTRGEAVTALIWKCAVNASRSNSGVSKLSILSR 287 (458)
Q Consensus 218 -----~~~p~-~~~---~~~~~~~~~~~f~fs~~~l~~Lk~~~~-~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~~l~~ 287 (458)
..+++ ..+ ...........+.++.+..++|++.|. ..+|.+.++.|.+-..+.+--+ ....+.+
T Consensus 185 ~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~~~t~~~~l~aa~~~~L~~~~g------~dv~ig~ 258 (436)
T 1l5a_A 185 QGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANANQIGWPDALVALCALYLESAEP------DAPWLWL 258 (436)
T ss_dssp HHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHST------TCCEEEE
T ss_pred HHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhC------CceEEee
Confidence 11111 111 012223456788899999999998887 6799999998887666665432 2467899
Q ss_pred EeeCCCCCCCCCCcCCcccceeeeeeeccCC-cccHHHHHHHHHHHHHhh
Q 012688 288 SVDIRKITVPPLPDNSVGNLVGYYASQKDES-DIQLQGLVRELREGIQDF 336 (458)
Q Consensus 288 ~vd~R~rl~p~lp~~Y~GN~v~~~~~~~~~~-~~~L~~vA~~iR~ai~~~ 336 (458)
+++.|..- --.+-.|+.+.......... ..++.+++..+++.+.+.
T Consensus 259 ~~~~R~~~---~~~~~vG~f~n~lplr~~~~~~~t~~~~l~~v~~~~~~~ 305 (436)
T 1l5a_A 259 PFMNRWGS---VAANVPGLMVNSLPLLRLSAQQTSLGNYLKQSGQAIRSL 305 (436)
T ss_dssp EECCCTTS---GGGGSCSCCCEEEEEECCCCTTCBHHHHHHHHHHHHHHH
T ss_pred ecccCCCh---HHhcCcceEEEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 99999652 23567788877777777665 668888888888887664
No 9
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.25 E-value=3.1e-05 Score=79.93 Aligned_cols=247 Identities=16% Similarity=0.078 Sum_probs=139.9
Q ss_pred HHHHHHHHHHhcccccCCCceec--C-CceEEcCCCCeeEEEEEec-cCh--HHhhCCCCcchhcccCCCcccCCC-CCc
Q 012688 75 SLQLKQSLSETLTRFYPLAGRVK--D-NITIDCSDHGAVYVEAQVN-CLL--QDLLKQPNGDSVIQLVPIQLAEES-KPG 147 (458)
Q Consensus 75 ~~~L~~sL~~~L~~~p~LaGrl~--~-~~~i~~~~~gv~~~~a~~d-~~~--~dl~~~p~~~~~~~l~p~~~~~~~-~~~ 147 (458)
.++|++++.+++..+|.|--++. + ...+..... +.+.+.... ..- +++.. .++...-.. -+ ...
T Consensus 49 ~~~L~~A~~~lv~rh~~LRt~f~~~~~~~~~v~~~~-~~~~~~d~~~~~~~~~~~~~-----~~~~~~~~~---fdl~~~ 119 (493)
T 4hvm_A 49 DDRLAAAADEVLDAFPLLRVNFVDDDGLWMRTRENA-DALVRSDLRGHPDPQARCVE-----LLRADRDRP---TDPERD 119 (493)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEEESSSEEEEECSCC-CCEEEEECTTSSSHHHHHHH-----HHHHHHSSC---CCTTTS
T ss_pred HHHHHHHHHHHHHhchhceeEEEccCCEEEEecCCC-CCceEEECCCCCchHHHHHH-----HHHHHhcCC---CCCCCC
Confidence 79999999999999999998885 2 222111222 333222211 000 11100 011100000 11 125
Q ss_pred ceEEEEEEEEecCcEEEEeceeeeecchhhHHHHHHHHHHHhcCCCCCCCCCccccccCCCC---CCcc---h--hhh--
Q 012688 148 LLLFVQSSFFTCGGVAIGVCISHKIADAATVVTFIRSWAGAAAGDHRRVYYPSYNASSLFPP---RDVT---A--TAM-- 217 (458)
Q Consensus 148 Pll~vQvt~~~cGG~iL~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~P~~dr~~l~~~---~~~p---~--~~~-- 217 (458)
|++.+.+.....+...|.+.+||.++||.|+..|++.+.+.+.|...+ .+..+-...... ...+ . ..+
T Consensus 120 pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~~l~~~Y~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 197 (493)
T 4hvm_A 120 PLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVLGAVWQAYYGRFRP--AQYRDFAEVADFHPLDRETVRVARHRWWSR 197 (493)
T ss_dssp CSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHHHHHHHHHTTCCCG--GGSBCGGGTTTCCTTCSHHHHHHHHHHHHH
T ss_pred CeEEEEEEEECCCcEEEEEecchhhccHHHHHHHHHHHHHHhCCCCCC--cCHHHHHHHHhhhhcccChhhHHHHHHHHH
Confidence 888777777665668999999999999999999999999999876522 111110001000 0101 0 001
Q ss_pred ccCC-CCccc--cccCceeEEEEEEchHhHHHHHHHhc-CCCC--hhhHHHHHHHHHHHhhhcCC-------CCCCceeE
Q 012688 218 LFLN-PPFNM--AMKEKCFTKRFVFYGPKIAALEAALS-APST--RGEAVTALIWKCAVNASRSN-------SGVSKLSI 284 (458)
Q Consensus 218 ~~~p-~~~~~--~~~~~~~~~~f~fs~~~l~~Lk~~~~-~~~S--t~d~l~A~lW~~~~rAr~~~-------~~~~~~~~ 284 (458)
.+.. ++... ..........+.++.+..++|++.|. ..+| .+.++.|.+-..+.+-+... .+ .....
T Consensus 198 ~l~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g-~~dv~ 276 (493)
T 4hvm_A 198 RLPALPVRGGDGGPVGPPETSRLRVPGSRWQALTEPGGPLGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTG-KDSLY 276 (493)
T ss_dssp HGGGSCCCC-------CCEEEEEEEEHHHHHHHHCC------CHHHHHHHHHHHHHHHC-----------------CEEE
T ss_pred hccCCCCCCCCCCCCCCCeeEEEEcCHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHhhhcccccccCcCC-CCCEE
Confidence 1110 11110 01112566788999999999998887 5789 99999887666665541100 11 25678
Q ss_pred EEEEeeCCCCCCCCCCcCCcccceeeeeeeccCC---cccHHHHHHHHHHHHHhh
Q 012688 285 LSRSVDIRKITVPPLPDNSVGNLVGYYASQKDES---DIQLQGLVRELREGIQDF 336 (458)
Q Consensus 285 l~~~vd~R~rl~p~lp~~Y~GN~v~~~~~~~~~~---~~~L~~vA~~iR~ai~~~ 336 (458)
+.++++.|..- --.+.+|+++......+... ..++.+++..+++.+.+.
T Consensus 277 ~g~~~~gR~~~---~~~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~~ 328 (493)
T 4hvm_A 277 LSTEVDLRDHL---QLGSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLDA 328 (493)
T ss_dssp EEEEEEHHHHT---TCCSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHHH
T ss_pred EEeeccCCCCc---chhcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHHH
Confidence 99999999652 23567888877666655543 357888888888877654
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.16 E-value=0.00098 Score=67.78 Aligned_cols=277 Identities=10% Similarity=0.003 Sum_probs=159.3
Q ss_pred CcccCCcccCC-----CC-CCCceEEEEecCCCCCCccccccccccchhhhHHHHHHHHHHhcccccCCCceecC---C-
Q 012688 30 KDYKLSLLDQI-----AP-PSYETLLLFYSFNGDDDRQHHHHISVYKANKLSLQLKQSLSETLTRFYPLAGRVKD---N- 99 (458)
Q Consensus 30 ~~~~Ls~lD~~-----~~-~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~---~- 99 (458)
..+|||+..++ .+ .......+.|+..... ..+.|+++|..++..++.|--++.. .
T Consensus 16 ~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~l---------------d~~~L~~Al~~lv~rh~~LRt~f~~~~~~~ 80 (466)
T 2xhg_A 16 GNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEGF---------------DPKVIQSVMDKIIEHHDALRMVYQHENGNV 80 (466)
T ss_dssp EECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTCC---------------CHHHHHHHHHHHHHHSGGGGEEEECGGGCC
T ss_pred CCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCCC---------------CHHHHHHHHHHHHHhChHhheEEecCCCce
Confidence 56888876542 22 1222334445544432 3789999999999999999988862 2
Q ss_pred ceEEcC--CCCeeEEEEEec--cChHHhhCCCCcchhcccCCCcccCCC-CCcceEEEEEEEEecCcEEEEeceeeeecc
Q 012688 100 ITIDCS--DHGAVYVEAQVN--CLLQDLLKQPNGDSVIQLVPIQLAEES-KPGLLLFVQSSFFTCGGVAIGVCISHKIAD 174 (458)
Q Consensus 100 ~~i~~~--~~gv~~~~a~~d--~~~~dl~~~p~~~~~~~l~p~~~~~~~-~~~Pll~vQvt~~~cGG~iL~~~~~H~v~D 174 (458)
.++... ...+.+.+.... ...++... ...+.+ .. .-+ ...|++.+.+.... ++-.|-+.+||.++|
T Consensus 81 ~q~v~~~~~~~~~~~~~d~~~~~~~~~~~~----~~~~~~--~~--~fdl~~~pl~r~~l~~~~-~~~~l~l~~HH~i~D 151 (466)
T 2xhg_A 81 VQHNRGLGGQLYDFFSYNLTAQPDVQQAIE----AETQRL--HS--SMNLQEGPLVKVALFQTL-HGDHLFLAIHHLVVD 151 (466)
T ss_dssp EEEECCSSSCCCEEEEEECTTCSCHHHHHH----HHHHHH--HT--TCCTTTCCCEEEEEEEET-TEEEEEEEEEGGGCC
T ss_pred eeeccccccccceeEEEecCCcccHHHHHH----HHHHHH--Hh--ccCCCCCCeEEEEEEEcC-CCCEEEEEeeeeeec
Confidence 122221 112222221110 01111000 000000 00 012 13688888777776 455577999999999
Q ss_pred hhhHHHHHHHHHHHhcC----CCCCCCCC---ccc------cccCCCCC-Ccchhhh-----ccCCCCcc------cccc
Q 012688 175 AATVVTFIRSWAGAAAG----DHRRVYYP---SYN------ASSLFPPR-DVTATAM-----LFLNPPFN------MAMK 229 (458)
Q Consensus 175 g~g~~~fl~~wa~~~rg----~~~~~~~P---~~d------r~~l~~~~-~~p~~~~-----~~~p~~~~------~~~~ 229 (458)
|.|+..|++.+.+.+++ .. +..+| .+. +..+.... +.....+ ..++..++ ....
T Consensus 152 g~S~~~l~~el~~~Y~~~~~g~~-~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~~lp~~~~~~~~~~ 230 (466)
T 2xhg_A 152 GISWRILFEDLATGYAQALAGQA-ISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQAKNVSLPKDYEVTDCKQ 230 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC-CCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHHCCCCCCCCSSCCSSCBG
T ss_pred hhhHHHHHHHHHHHHHHHHcCCC-CCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhccCCcccCCcccccccccc
Confidence 99999999999998863 32 11111 110 00010000 0000000 11111111 0112
Q ss_pred CceeEEEEEEchHhHHHHHHHhc--CCCChhhHHHHHHHHHHHhhhcCCCCCCceeEEEEEeeCCCCCCC-CCCcCCccc
Q 012688 230 EKCFTKRFVFYGPKIAALEAALS--APSTRGEAVTALIWKCAVNASRSNSGVSKLSILSRSVDIRKITVP-PLPDNSVGN 306 (458)
Q Consensus 230 ~~~~~~~f~fs~~~l~~Lk~~~~--~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~p-~lp~~Y~GN 306 (458)
.......+.++.+..++|++.+. ..+|.++++.|.+-..+.+--+ .....+.++++.|....+ +--.+-+|+
T Consensus 231 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~t~~~~llaa~~~~l~~~~~-----~~dv~ig~~~~gR~~~~~~~~~~~~vG~ 305 (466)
T 2xhg_A 231 KSVRNMRIRLHPEETEQLLKHANQAYQTEINDLLLAALGLAFAEWSK-----LAQIVIHLEGHGREDIIEQANVARTVGW 305 (466)
T ss_dssp GGEEEEEEECCHHHHHHHHHTGGGTTTCCHHHHHHHHHHHHHHHHHC-----CSEEEEEEEECCCCSCSTTCCCTTCCSC
T ss_pred ccceEEEEEcCHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhC-----CCceEEEecCCCCCccccCCCccccccc
Confidence 33456788999999999988764 4789999998887777766543 246789999999976421 123467788
Q ss_pred ceeeeeeeccCC-cccHHHHHHHHHHHHHhh
Q 012688 307 LVGYYASQKDES-DIQLQGLVRELREGIQDF 336 (458)
Q Consensus 307 ~v~~~~~~~~~~-~~~L~~vA~~iR~ai~~~ 336 (458)
.+......+... ..++.+++..+++.+.++
T Consensus 306 f~n~lplr~~~~~~~~~~~~l~~v~~~~~~~ 336 (466)
T 2xhg_A 306 FTSQYPVLLDLKQTAPLSDYIKLTKENMRKI 336 (466)
T ss_dssp CCEEEEEEEECSCCCSHHHHHHHHHHHHHHS
T ss_pred eeeeccEEEecCCCCCHHHHHHHHHHHHHhC
Confidence 877766666655 568899999999988765
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=97.97 E-value=0.00097 Score=77.13 Aligned_cols=247 Identities=13% Similarity=0.025 Sum_probs=147.2
Q ss_pred HHHHHHHHHHhcccccCCCceecC-----CceEEcCCCCeeEEEEEeccChHHhhCCCCc---chhcccCCCcc-cCCCC
Q 012688 75 SLQLKQSLSETLTRFYPLAGRVKD-----NITIDCSDHGAVYVEAQVNCLLQDLLKQPNG---DSVIQLVPIQL-AEESK 145 (458)
Q Consensus 75 ~~~L~~sL~~~L~~~p~LaGrl~~-----~~~i~~~~~gv~~~~a~~d~~~~dl~~~p~~---~~~~~l~p~~~-~~~~~ 145 (458)
+++|++++.+++.+++.|--++.. ..++........+.+. |+...+.. ..++.++-... ..-+.
T Consensus 49 ~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~~~~-------d~~~~~~~~~~~~~~~~~~~~~~~~fdl 121 (1304)
T 2vsq_A 49 IKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEEI-------DLTHLTGSEQTAKINEYKEQDKIRGFDL 121 (1304)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCCEEEE-------ECTTSCHHHHHHHHHHHHHHHHHHCCCT
T ss_pred HHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCceEEE-------ECCCCCchhHHHHHHHHHHHHhcCCCCC
Confidence 799999999999999999988751 1222222222222111 11111100 00110000000 00121
Q ss_pred -CcceEEEEEEEEecCcEEEEeceeeeecchhhHHHHHHHHHHHhcC----CCCCCCCC--ccccc--cCCCCCCcch--
Q 012688 146 -PGLLLFVQSSFFTCGGVAIGVCISHKIADAATVVTFIRSWAGAAAG----DHRRVYYP--SYNAS--SLFPPRDVTA-- 214 (458)
Q Consensus 146 -~~Pll~vQvt~~~cGG~iL~~~~~H~v~Dg~g~~~fl~~wa~~~rg----~~~~~~~P--~~dr~--~l~~~~~~p~-- 214 (458)
..|++.+.+.....+...|.+.+||.++||.|+..|++.+++++++ .. +..+| .+... .+... +...
T Consensus 122 ~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~-~~l~~~~~y~d~~~~~~~~-~~~~~~ 199 (1304)
T 2vsq_A 122 TRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKP-YSLPPVKPYKDYIKWLEKQ-DKQASL 199 (1304)
T ss_dssp TTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCC-CCCCCCCCTHHHHHHHHTS-CHHHHH
T ss_pred CCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCC-CCCCCcccHHHHHHHHhcc-hhhHHH
Confidence 3688888888777678899999999999999999999999998864 22 11111 11100 00000 1110
Q ss_pred hhh-----ccCCC-Ccc-----ccccCceeEEEEEEchHhHHHHHHHhc-CCCChhhHHHHHHHHHHHhhhcCCCCCCce
Q 012688 215 TAM-----LFLNP-PFN-----MAMKEKCFTKRFVFYGPKIAALEAALS-APSTRGEAVTALIWKCAVNASRSNSGVSKL 282 (458)
Q Consensus 215 ~~~-----~~~p~-~~~-----~~~~~~~~~~~f~fs~~~l~~Lk~~~~-~~~St~d~l~A~lW~~~~rAr~~~~~~~~~ 282 (458)
..| .++++ .+. ...........|.++++..++||+.|. ..+|.+.+|.|.+-..+.|--+ .+.
T Consensus 200 ~yW~~~L~~~~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~~~T~~~vllaa~a~~L~r~tg-----~~d 274 (1304)
T 2vsq_A 200 RYWREYLEGFEGQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQHTTLSTALQAVWSVLISRYQQ-----SGD 274 (1304)
T ss_dssp HHHHHHHTTCCCCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT-----CSE
T ss_pred HHHHHHhCCCCccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-----CCC
Confidence 000 11111 111 011223456778899999999999887 6799999998876666665533 246
Q ss_pred eEEEEEeeCCCCCCCCCCcCCcccceeeeeeeccCC-cccHHHHHHHHHHHHHhh
Q 012688 283 SILSRSVDIRKITVPPLPDNSVGNLVGYYASQKDES-DIQLQGLVRELREGIQDF 336 (458)
Q Consensus 283 ~~l~~~vd~R~rl~p~lp~~Y~GN~v~~~~~~~~~~-~~~L~~vA~~iR~ai~~~ 336 (458)
..+..++..|....+.+ .+-.|+.+.....+...+ ..++.++...+++...+.
T Consensus 275 vv~G~pvsgR~~~~~~~-~~~vG~fvntlplr~~~~~~~s~~~ll~~v~~~~~~a 328 (1304)
T 2vsq_A 275 LAFGTVVSGRPAEIKGV-EHMVGLFINVVPRRVKLSEGITFNGLLKRLQEQSLQS 328 (1304)
T ss_dssp EEEEEEECCCCTTSTTG-GGCCSSCCEEEEEEEECCTTCBHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCccchhh-hcccccceeEEEEEecCCCCCcHHHHHHHHHHHHHHh
Confidence 78999999997632212 466787777766666665 678888888888877653
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.18 E-value=0.0057 Score=63.48 Aligned_cols=154 Identities=12% Similarity=-0.002 Sum_probs=93.9
Q ss_pred cEEEEeceeeeecchhhHHHHHHHHHHHhcCCC---CCCCCCccc----cccCCCCC----Ccc------hh---hhcc-
Q 012688 161 GVAIGVCISHKIADAATVVTFIRSWAGAAAGDH---RRVYYPSYN----ASSLFPPR----DVT------AT---AMLF- 219 (458)
Q Consensus 161 G~iL~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~---~~~~~P~~d----r~~l~~~~----~~p------~~---~~~~- 219 (458)
-.-|.+.+||.++||.|...|++.+=+...... .....|.++ ...|.++- ..| .. ...+
T Consensus 177 ~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~~ 256 (519)
T 3fot_A 177 TVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREMKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEYT 256 (519)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGSCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHHH
T ss_pred eEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCCCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 366778899999999999999999877766321 111223332 11233221 111 00 0000
Q ss_pred -------CC--CCccccccCceeEEEEEEchHhHHHHHHHhc-C---CCChhhHHHHHHHHHHHhhhcC-CCCCCceeEE
Q 012688 220 -------LN--PPFNMAMKEKCFTKRFVFYGPKIAALEAALS-A---PSTRGEAVTALIWKCAVNASRS-NSGVSKLSIL 285 (458)
Q Consensus 220 -------~p--~~~~~~~~~~~~~~~f~fs~~~l~~Lk~~~~-~---~~St~d~l~A~lW~~~~rAr~~-~~~~~~~~~l 285 (458)
.. -+.. .....-....+.|++++.++|++.|. . .+|-+.+|.|.+-.++.+.... ..........
T Consensus 257 ~~~~~~~~~~~~P~~-~~~~~~~~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~ 335 (519)
T 3fot_A 257 SALVANYKSRGMKFQ-PGLALPRCVIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFIS 335 (519)
T ss_dssp HHHHHHHHSCCSBCC-CCCCCEEEEEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEE
T ss_pred HHhhcCCCcccCCCC-CCCCCcceEEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEE
Confidence 00 0111 01122345678899999999999998 4 8999999988777776664221 1111245789
Q ss_pred EEEeeCCCCCCCCCCcCCcccceeeeeeec
Q 012688 286 SRSVDIRKITVPPLPDNSVGNLVGYYASQK 315 (458)
Q Consensus 286 ~~~vd~R~rl~p~lp~~Y~GN~v~~~~~~~ 315 (458)
.++||+|+++.++.-.+|||.++.......
T Consensus 336 ~~pvnlR~~l~~~~~~n~~~~~~~~~~~~v 365 (519)
T 3fot_A 336 PTSVDGRRWLREDIASNFYAMCQTAAVVRI 365 (519)
T ss_dssp EEEEECGGGBCHHHHTSCCSCCEEEEEEEE
T ss_pred EeeeeccccCCCcccccccceeeeeeeeEe
Confidence 999999999976555678898877655544
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=60.83 E-value=5.4 Score=35.83 Aligned_cols=44 Identities=14% Similarity=0.197 Sum_probs=32.6
Q ss_pred cceEEEEEEEEecCc--EEEEeceeeeecchhhHHHHHHHHHHHhc
Q 012688 147 GLLLFVQSSFFTCGG--VAIGVCISHKIADAATVVTFIRSWAGAAA 190 (458)
Q Consensus 147 ~Pll~vQvt~~~cGG--~iL~~~~~H~v~Dg~g~~~fl~~wa~~~r 190 (458)
.|++.+=-..-+.|. +-|++++||.++||.-...|++.+.+...
T Consensus 164 ~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 164 APIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp SCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred ccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 588754221112233 67889999999999999999999998764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=59.31 E-value=5.9 Score=35.69 Aligned_cols=43 Identities=19% Similarity=0.206 Sum_probs=30.9
Q ss_pred cceEEEEEEEEecCc--EEEEeceeeeecchhhHHHHHHHHHHHh
Q 012688 147 GLLLFVQSSFFTCGG--VAIGVCISHKIADAATVVTFIRSWAGAA 189 (458)
Q Consensus 147 ~Pll~vQvt~~~cGG--~iL~~~~~H~v~Dg~g~~~fl~~wa~~~ 189 (458)
.|++.+=--.-+.|. +-|++++||.++||.-...|++.+.+..
T Consensus 172 ~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 172 YPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 687753211112132 5788999999999999999999998754
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=58.59 E-value=6.2 Score=35.61 Aligned_cols=44 Identities=7% Similarity=0.154 Sum_probs=32.8
Q ss_pred cceEEEEEEEEecCc--EEEEeceeeeecchhhHHHHHHHHHHHhc
Q 012688 147 GLLLFVQSSFFTCGG--VAIGVCISHKIADAATVVTFIRSWAGAAA 190 (458)
Q Consensus 147 ~Pll~vQvt~~~cGG--~iL~~~~~H~v~Dg~g~~~fl~~wa~~~r 190 (458)
.|++.+=-..-+.|. +-|++++||.+.||.-...|++.+.+...
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 577754322223122 67899999999999999999999988764
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=56.54 E-value=7.6 Score=35.52 Aligned_cols=29 Identities=10% Similarity=0.310 Sum_probs=27.1
Q ss_pred EEEEeceeeeecchhhHHHHHHHHHHHhc
Q 012688 162 VAIGVCISHKIADAATVVTFIRSWAGAAA 190 (458)
Q Consensus 162 ~iL~~~~~H~v~Dg~g~~~fl~~wa~~~r 190 (458)
+-|+++++|.++||.-...|++.+.+...
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999998765
No 17
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=53.63 E-value=8.3 Score=35.11 Aligned_cols=30 Identities=13% Similarity=0.278 Sum_probs=27.2
Q ss_pred EEEEeceeeeecchhhHHHHHHHHHHHhcC
Q 012688 162 VAIGVCISHKIADAATVVTFIRSWAGAAAG 191 (458)
Q Consensus 162 ~iL~~~~~H~v~Dg~g~~~fl~~wa~~~rg 191 (458)
+-|+++++|-+.||.-...|++.+.+....
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 669999999999999999999999988753
No 18
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=53.58 E-value=8.2 Score=35.37 Aligned_cols=29 Identities=10% Similarity=0.291 Sum_probs=26.8
Q ss_pred EEEEeceeeeecchhhHHHHHHHHHHHhc
Q 012688 162 VAIGVCISHKIADAATVVTFIRSWAGAAA 190 (458)
Q Consensus 162 ~iL~~~~~H~v~Dg~g~~~fl~~wa~~~r 190 (458)
+-|+++++|-+.||.-...|++.+.+...
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le 236 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLA 236 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998775
No 19
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=53.47 E-value=7.2 Score=35.31 Aligned_cols=30 Identities=17% Similarity=0.322 Sum_probs=27.3
Q ss_pred EEEEeceeeeecchhhHHHHHHHHHHHhcC
Q 012688 162 VAIGVCISHKIADAATVVTFIRSWAGAAAG 191 (458)
Q Consensus 162 ~iL~~~~~H~v~Dg~g~~~fl~~wa~~~rg 191 (458)
+-|+++++|-+.||.-...|++.+.+....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 458899999999999999999999998864
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=51.93 E-value=9 Score=35.56 Aligned_cols=29 Identities=28% Similarity=0.465 Sum_probs=26.7
Q ss_pred EEEEeceeeeecchhhHHHHHHHHHHHhc
Q 012688 162 VAIGVCISHKIADAATVVTFIRSWAGAAA 190 (458)
Q Consensus 162 ~iL~~~~~H~v~Dg~g~~~fl~~wa~~~r 190 (458)
+-|+++++|-+.||.-...|++.+.+...
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 56899999999999999999999998775
No 21
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=46.08 E-value=11 Score=20.68 Aligned_cols=18 Identities=11% Similarity=0.276 Sum_probs=14.9
Q ss_pred CCChhhHHHHHHHHHHHh
Q 012688 254 PSTRGEAVTALIWKCAVN 271 (458)
Q Consensus 254 ~~St~d~l~A~lW~~~~r 271 (458)
-+++.|-|+-++|+++..
T Consensus 7 vftsqdylsdhlwralna 24 (26)
T 2xl1_A 7 VFTSQDYLSDHLWRALNA 24 (26)
T ss_pred eeecHHHHHHHHHHHHhc
Confidence 367789999999998764
No 22
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=45.45 E-value=13 Score=34.30 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=27.5
Q ss_pred EEEEeceeeeecchhhHHHHHHHHHHHhcC
Q 012688 162 VAIGVCISHKIADAATVVTFIRSWAGAAAG 191 (458)
Q Consensus 162 ~iL~~~~~H~v~Dg~g~~~fl~~wa~~~rg 191 (458)
+-|+++++|-+.||.-...|++.|.+....
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999999874
No 23
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=44.02 E-value=14 Score=33.92 Aligned_cols=30 Identities=17% Similarity=0.369 Sum_probs=27.2
Q ss_pred EEEEeceeeeecchhhHHHHHHHHHHHhcC
Q 012688 162 VAIGVCISHKIADAATVVTFIRSWAGAAAG 191 (458)
Q Consensus 162 ~iL~~~~~H~v~Dg~g~~~fl~~wa~~~rg 191 (458)
+-|+++++|-+.||.-...|++.|.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999988763
No 24
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=39.83 E-value=58 Score=22.35 Aligned_cols=44 Identities=11% Similarity=0.150 Sum_probs=34.5
Q ss_pred ceeEEEEEEchHhHHHHHHHhcCCCChhhHHHHHHHHHHHhhhcCCC
Q 012688 231 KCFTKRFVFYGPKIAALEAALSAPSTRGEAVTALIWKCAVNASRSNS 277 (458)
Q Consensus 231 ~~~~~~f~fs~~~l~~Lk~~~~~~~St~d~l~A~lW~~~~rAr~~~~ 277 (458)
+.....|+||.++-+.|.+.+. -.-|.+..+|=|.|.++.....
T Consensus 14 ~~~~Vs~Y~SkEey~~L~klA~---eE~eSV~sfIKR~IlK~l~ykk 57 (66)
T 2k1o_A 14 RNFSVTFYLSKEEHDVLRRLAD---EEVESVNSFVKRHILKTIIYKK 57 (66)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHH---TTCSCHHHHHHHHHHHHHCSSC
T ss_pred cceEEEEEecHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhc
Confidence 4556789999999999999987 2345688888888888876443
No 25
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=31.24 E-value=48 Score=21.91 Aligned_cols=39 Identities=21% Similarity=0.213 Sum_probs=28.3
Q ss_pred eEEEEEEchHhHHHHHHHhcCCCChhhHHHHHHHHHHHhhhc
Q 012688 233 FTKRFVFYGPKIAALEAALSAPSTRGEAVTALIWKCAVNASR 274 (458)
Q Consensus 233 ~~~~f~fs~~~l~~Lk~~~~~~~St~d~l~A~lW~~~~rAr~ 274 (458)
....|+||.++-+.|++.+.. ..|.+..+|=|.|.++..
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~e---E~eSV~sfIKR~IlK~lr 40 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANE---EEESVGSYIKRYILKALR 40 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHH---TTSCTTHHHHHHHHHHHT
T ss_pred ceEEEEecHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Confidence 356899999999999999871 134455667777777653
No 26
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=26.51 E-value=14 Score=36.95 Aligned_cols=29 Identities=17% Similarity=0.302 Sum_probs=0.0
Q ss_pred EEEEeceeeeecchhhHHHHHHHHHHHhc
Q 012688 162 VAIGVCISHKIADAATVVTFIRSWAGAAA 190 (458)
Q Consensus 162 ~iL~~~~~H~v~Dg~g~~~fl~~wa~~~r 190 (458)
+-|+++++|-+.||.-...|++.|.+.+.
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le 419 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLS 419 (428)
T ss_dssp -----------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHh
Confidence 35899999999999999999999988765
Done!