Query 012689
Match_columns 458
No_of_seqs 134 out of 1253
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 14:20:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012689.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012689hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 5.4E-83 1.9E-87 654.3 47.3 424 16-455 4-438 (439)
2 2xr7_A Malonyltransferase; xen 100.0 8E-75 2.7E-79 596.6 33.4 427 20-458 2-451 (453)
3 2e1v_A Acyl transferase; BAHD 100.0 9.4E-75 3.2E-79 596.1 29.7 429 14-458 1-451 (454)
4 2bgh_A Vinorine synthase; VS, 100.0 4.9E-73 1.7E-77 577.5 34.1 405 18-457 3-415 (421)
5 2rkv_A Trichothecene 3-O-acety 100.0 1.7E-64 5.8E-69 519.7 32.6 404 38-456 4-446 (451)
6 1q9j_A PAPA5, polyketide synth 99.2 6.3E-09 2.2E-13 104.6 26.4 292 36-366 5-314 (422)
7 4hvm_A Tlmii; PSI-biology, mid 98.8 4.7E-08 1.6E-12 100.6 14.0 293 36-365 11-327 (493)
8 2jgp_A Tyrocidine synthetase 3 98.8 4.6E-06 1.6E-10 86.2 28.4 288 36-365 94-400 (520)
9 1l5a_A Amide synthase, VIBH; n 98.7 6.1E-07 2.1E-11 90.4 19.1 257 68-365 33-304 (436)
10 2xhg_A Tyrocidine synthetase A 98.4 1.3E-05 4.4E-10 81.4 20.1 297 36-367 15-337 (466)
11 2vsq_A Surfactin synthetase su 98.2 3.5E-05 1.2E-09 88.5 19.1 267 68-365 47-327 (1304)
12 3fot_A 15-O-acetyltransferase; 98.2 0.00016 5.4E-09 74.4 21.8 272 67-365 72-399 (519)
13 3cla_A Type III chloramphenico 68.9 3.3 0.00011 36.8 3.4 45 151-195 163-209 (213)
14 2i9d_A Chloramphenicol acetylt 67.8 3.6 0.00012 36.7 3.4 44 151-194 171-216 (217)
15 1q23_A Chloramphenicol acetylt 67.1 3.8 0.00013 36.6 3.4 44 152-195 168-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 64.4 4.8 0.00017 36.4 3.7 29 167-195 204-232 (239)
17 3rqc_A Probable lipoamide acyl 63.4 4.1 0.00014 36.5 3.0 30 167-196 187-216 (224)
18 1scz_A E2, dihydrolipoamide su 62.0 5.3 0.00018 36.0 3.4 30 167-196 196-225 (233)
19 1dpb_A Dihydrolipoyl-transacet 61.9 5.3 0.00018 36.2 3.4 30 167-196 208-237 (243)
20 2ii3_A Lipoamide acyltransfera 60.2 5.9 0.0002 36.4 3.4 29 167-195 224-252 (262)
21 3mae_A 2-oxoisovalerate dehydr 55.3 8 0.00028 35.3 3.4 30 167-196 210-239 (256)
22 3l60_A Branched-chain alpha-ke 53.9 8.8 0.0003 35.0 3.4 30 167-196 205-234 (250)
23 4hhu_A OR280; engineered prote 48.4 25 0.00085 27.5 4.7 46 53-105 84-129 (170)
24 2xl1_A Arginine attenuator pep 46.8 15 0.00051 19.7 2.2 20 277-296 5-24 (26)
25 4hhu_A OR280; engineered prote 43.1 25 0.00084 27.5 3.9 45 54-105 4-48 (170)
26 1x93_A Hypothetical protein HP 40.9 72 0.0025 20.6 5.8 24 250-273 2-25 (55)
27 2kl8_A OR15; structural genomi 38.1 69 0.0023 22.0 5.0 37 69-105 11-47 (85)
28 3dva_I Dihydrolipoyllysine-res 35.0 8.1 0.00028 38.2 0.0 30 167-196 391-420 (428)
29 3qoq_A Alginate and motility r 30.7 1.4E+02 0.0048 21.0 5.9 45 247-298 17-61 (69)
30 2k1o_A Putative; repressor, tr 26.2 1.5E+02 0.0052 19.9 5.9 26 247-272 13-38 (66)
31 1p94_A Plasmid partition prote 25.3 1.2E+02 0.0041 21.8 4.9 41 247-294 32-72 (76)
32 2an7_A Protein PARD; bacterial 22.9 1.4E+02 0.0048 21.6 4.7 34 250-290 2-35 (83)
33 1baz_A ARC repressor; transcri 20.2 1.9E+02 0.0065 18.9 6.2 43 248-297 6-48 (53)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=5.4e-83 Score=654.26 Aligned_cols=424 Identities=29% Similarity=0.521 Sum_probs=363.3
Q ss_pred CcceEEEEeeEEEeCCCCCCCCeeeCCcccccc-ccceeEEEEecCCCCCCChhhHHHHHHHHHhhcccccccCcEEEee
Q 012689 16 QDLKVTIHHSSLVFPSQETEKKSLFLSNIDQVL-NFSVETVHFFESHKDFPPHVVAEKLRNTLGKILVPYDFLAGRLKAN 94 (458)
Q Consensus 16 ~~~~v~~~~~~~v~p~~~~~~~~~~LS~lD~~~-~~y~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~ 94 (458)
.+|+|+|.++++|+|+.+++.+.++||+||+++ +.|++.+|||+.+... ....+++||+||+++|.+||+|||||+.+
T Consensus 4 ~~~~V~i~~~~~V~P~~~tp~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~-~~~~~~~Lk~sLs~~L~~f~plAGRl~~~ 82 (439)
T 4g22_A 4 GSMKIEVKESTMVRPAQETPGRNLWNSNVDLVVPNFHTPSVYFYRPTGSS-NFFDAKVLKDALSRALVPFYPMAGRLKRD 82 (439)
T ss_dssp --CCEEEEEEEEECCSSCCCCCEECCCHHHHSCCTTCCCEEEEECCCSCT-TTTCHHHHHHHHHHHTTTTGGGGCEEEEC
T ss_pred CceEEEEeeeEEEeCCCCCCCCeecCChhHhCccccceeeEEEEcCCCCc-cccHHHHHHHHHHHHHhhccccceeeeeC
Confidence 458999999999999999999999999999999 9999999999864332 22368999999999999999999999986
Q ss_pred CCCCcEEEEecCCceEEEEEeccCcccccCCCCCCCcccccccccccCCCCCCCCCCCCeEEEEEeEEecCeEEEEeccc
Q 012689 95 AKTGKMEIDCNAAGAVFIVASSEYKLDDIGDLVYPNPGFKQLIINSSFDDNLLEQDDKPLCIFQVTSFKCGGFSIGTSTN 174 (458)
Q Consensus 95 ~~~G~~~i~~~~~gv~f~~~~~~~s~~~l~~~~~p~~~~~~l~p~~~~~~~~~~~~~~P~l~vqvt~f~~gG~~l~~~~~ 174 (458)
+ +|+++|+|+++||.|+++++|++++|+.+.. |...+++|+|... ...+..+.|++.+|||+|.|||++||+++|
T Consensus 83 ~-~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~-p~~~~~~l~p~~~---~~~~~~~~pll~vQvT~f~cGG~~lg~~~~ 157 (439)
T 4g22_A 83 E-DGRIEIECNGEGVLFVEAESDGVVDDFGDFA-PTLELRRLIPAVD---YSQGISSYALLVLQVTYFKCGGVSLGVGMR 157 (439)
T ss_dssp T-TSCEEEECCCCCEEEEEEEESSCGGGGTTCC-CCGGGGGGSCCCC---TTSCTTSSCSEEEEEEECTTSCEEEEEEEC
T ss_pred C-CCCEEEEECCCCCEEEEEEcCCcHHHhcCCC-CCHHHHhcCCCCC---cccccccCceeEEEEEEecCCCEEEEEEee
Confidence 4 6999999999999999999999999997644 6666778887654 222235679999999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHhcCCCCCCCCCCCcccccCCCCCCCCCCccccccCCCCCCCCCCCCCCccCccCCceEEEE
Q 012689 175 HATFDGLSFKVFLDNLAALAADKPLAIIPCNDRRLLAARSPPRVTFDHPEMLKLKMPFGEESNNAPIFDITQEDLDFKIF 254 (458)
Q Consensus 175 H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~f 254 (458)
|.++||.|+.+|+++||++|||.+.+.+|++||+++.+++||....+|.+|...+...+.. ...+.....+++.++|
T Consensus 158 H~v~Dg~~~~~Fl~~wa~~~rg~~~~~~P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~f 234 (439)
T 4g22_A 158 HHAADGFSGLHFINSWSDMARGLDVTLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSP---QTAASDSVPETAVSIF 234 (439)
T ss_dssp TTTCCHHHHHHHHHHHHHHHTTCCCSSCCBCCGGGGCCCSSCCCSSCCGGGSCCC------------------CEEEEEE
T ss_pred eccCcHHHHHHHHHHHHHHhCCCCCCCCCccccccccCCCCCCCCcCcccccCCCCCcccc---cccccCCcccceEEEE
Confidence 9999999999999999999999877778999999998888877666777775432100000 0000001156899999
Q ss_pred EeCHHHHHHHHHHhhhcccccCCcccchHHHHHHHHHHHHHhhcccccCCCCCceEEEEEEeeCCCCCCCCCCCCccccc
Q 012689 255 RLTPDDIANLKEKAKATVEYENSRYITGFNVVSALIWRCKALSYDHAKGKTPERESRMLYAVDIRPRLNPPLPASYVGNA 334 (458)
Q Consensus 255 ~~~~~~l~~Lk~~~~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~ 334 (458)
+|++++|++||+++.++.. ..++|++|+|+|++|+|+++|| +.++++.+++.++||+|+|++||+|++|+||+
T Consensus 235 ~fs~~~i~~LK~~a~~~~~---~~~~St~dal~A~iWr~~~rAr----~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~ 307 (439)
T 4g22_A 235 KLTREQISALKAKSKEDGN---TISYSSYEMLAGHVWRCACKAR----GLEVDQGTKLYIATDGRARLRPSLPPGYFGNV 307 (439)
T ss_dssp EECHHHHHHHHHGGGGGGC---CCCCCHHHHHHHHHHHHHHHHT----TCCTTCEEEEEEEEECTTTSSSCCCTTBCSCC
T ss_pred EECHHHHHHHHHHhhccCC---CCCccHHHHHHHHHHHHHHHhc----CCCCCCcEEEEEEEcccCCCCCCCCCCcccce
Confidence 9999999999999976542 4679999999999999999999 66778899999999999999999999999999
Q ss_pred eeeeccccchhhhccCcHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCC----------CCCcEEEccCcccccccccc
Q 012689 335 VLSAYANAKCEELKEKPFSRLVEMVSEGAKRMSDEYARSAIDWGETYKGF----------PHGEFLVSSWWKLGFSKVEY 404 (458)
Q Consensus 335 ~~~~~~~~~~~~l~~~~l~~~A~~iR~ai~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~tsw~~~~~~~~DF 404 (458)
+..+.+.++++||.+.+|+++|..||+++.+++++++++.++|++..++. ...++.+|||+++++|++||
T Consensus 308 v~~~~~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DF 387 (439)
T 4g22_A 308 IFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADF 387 (439)
T ss_dssp EEEECCEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCC
T ss_pred eehhhcceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecCcCCcccccc
Confidence 99999999999999999999999999999999999999999999876432 13579999999999999999
Q ss_pred CCCccccccccccccCcEEEEeeCCCCCCcEEEEEeCChHHHHHHHHHHHh
Q 012689 405 PWGKPKYSCPVVYHKKDIILLFPNIDNDNGVNVLVSLPSKEMVEFESLFNK 455 (458)
Q Consensus 405 G~G~P~~~~~~~~~~~g~~~i~p~~~~~gg~ev~v~L~~~~m~~l~~~~~~ 455 (458)
|||+|+++++.....+|.++++|.++++||++|.|+|++++|++|+++|++
T Consensus 388 GwGkP~~~~~~~~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~~~~~ 438 (439)
T 4g22_A 388 GWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQSFLYD 438 (439)
T ss_dssp SSCCCSEEEESSCCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHHHHTC
T ss_pred CCCCcceeeccccCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHHHhcc
Confidence 999999999877667899999999878899999999999999999999975
No 2
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=8e-75 Score=596.63 Aligned_cols=427 Identities=22% Similarity=0.319 Sum_probs=340.8
Q ss_pred EEEEeeEEEeCCCC-CCCCeeeCCcccccc--ccceeEEEEecCCCCCC--ChhhHHHHHHHHHhhcccccccCcEEEee
Q 012689 20 VTIHHSSLVFPSQE-TEKKSLFLSNIDQVL--NFSVETVHFFESHKDFP--PHVVAEKLRNTLGKILVPYDFLAGRLKAN 94 (458)
Q Consensus 20 v~~~~~~~v~p~~~-~~~~~~~LS~lD~~~--~~y~~~~~~f~~~~~~~--~~~~~~~L~~sL~~~L~~~p~LaGrl~~~ 94 (458)
|+|.++++|+|+.+ ++.+.++||.||+.+ ..|++.+|||+.+.... .+..+++||+||+++|.+||+|||||+.+
T Consensus 2 v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~ 81 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSATELTLPLTYFDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVACP 81 (453)
T ss_dssp CEEEEESCCCCCTTCCSEEEEECCHHHHGGGGSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEEE
T ss_pred eEEEEEEEecCCCCCCCCceECCCHHHhhhhhcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEcc
Confidence 89999999999987 456899999999985 56999999998653211 22468999999999999999999999987
Q ss_pred CC-CCcEEEEec-CCceEEEEEeccCcccccCCCC-CCCcccccccccccCCCCCCCCCCCCeEEEEEeEEecCeEEEEe
Q 012689 95 AK-TGKMEIDCN-AAGAVFIVASSEYKLDDIGDLV-YPNPGFKQLIINSSFDDNLLEQDDKPLCIFQVTSFKCGGFSIGT 171 (458)
Q Consensus 95 ~~-~G~~~i~~~-~~gv~f~~~~~~~s~~~l~~~~-~p~~~~~~l~p~~~~~~~~~~~~~~P~l~vqvt~f~~gG~~l~~ 171 (458)
+. +|+++|+|+ ++||.|++++++.+++++.+.. .|...++.|+|....+.......+.|++.+|||+|.|||++||+
T Consensus 82 ~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg~ 161 (453)
T 2xr7_A 82 QDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISIGF 161 (453)
T ss_dssp SSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEEEEE
T ss_pred CCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEEEEE
Confidence 43 799999999 5999999999999999996433 34455677887643110000011279999999999999999999
Q ss_pred cccccccchhhHHHHHHHHHHHhc-CC-C----CCCCCCCCcccccCCCCCCCCCCccccccCCC-CCCCCCCCCCCccC
Q 012689 172 STNHATFDGLSFKVFLDNLAALAA-DK-P----LAIIPCNDRRLLAARSPPRVTFDHPEMLKLKM-PFGEESNNAPIFDI 244 (458)
Q Consensus 172 ~~~H~v~Dg~~~~~fl~~wa~~~r-g~-~----~~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~~-p~~~~~~~~~~~~~ 244 (458)
++||+++||.|+.+|+++||++|| |. . ....|++||+.+.. |+.. .+..+..... +. ... ... ..
T Consensus 162 ~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~--p~~~--~~~~~~~~~~~~~-~~~--~~~-~~ 233 (453)
T 2xr7_A 162 TNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKD--PNGV--GMSIWNEMKKYKH-MMK--MSD-VV 233 (453)
T ss_dssp EECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCC--SSCH--HHHTTTTGGGCTT-TSC--CSC-CC
T ss_pred eeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCccccccccC--CCCc--chHHHHhccccCC-ccc--ccc-cc
Confidence 999999999999999999999999 86 3 23468999988752 3221 1110000000 10 000 000 01
Q ss_pred ccCCceEEEEEeCHHHHHHHHHHhhhcccccCCcccchHHHHHHHHHHHHHhhcccccCC-CCCceEEEEEEeeCCCCCC
Q 012689 245 TQEDLDFKIFRLTPDDIANLKEKAKATVEYENSRYITGFNVVSALIWRCKALSYDHAKGK-TPERESRMLYAVDIRPRLN 323 (458)
Q Consensus 245 ~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~-~~~~~~~l~~~vd~R~rl~ 323 (458)
...++..++|+|++++|++||+++.++.. ...++|++|+|+|++|+|+++||...... ++++.+.+.++||+|+|++
T Consensus 234 ~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~--~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~ 311 (453)
T 2xr7_A 234 TPPDKVRGTFIITRHDIGKLKNLVLTRRP--KLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFN 311 (453)
T ss_dssp CCCSCCCEEEEECHHHHHHHHHHHHHHSC--CCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSS
T ss_pred CCCCceEEEEEECHHHHHHHHHHHhhcCC--CCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccCC
Confidence 23467789999999999999999976542 12689999999999999999999321001 5678899999999999999
Q ss_pred CCCCCCccccceeeeccccchhhhcc-CcHHHHHHHHHHHHhc--CCHH-HHHHHHHHhhhccCCC-CCcEEEccCcccc
Q 012689 324 PPLPASYVGNAVLSAYANAKCEELKE-KPFSRLVEMVSEGAKR--MSDE-YARSAIDWGETYKGFP-HGEFLVSSWWKLG 398 (458)
Q Consensus 324 pplp~~Y~GN~~~~~~~~~~~~~l~~-~~l~~~A~~iR~ai~~--~~~~-~~~~~~~~~~~~~~~~-~~~~~~tsw~~~~ 398 (458)
||+|++|+||++..+.+.++++||.+ .+|+++|..||+++.+ .+++ ++++ +|++..+++. ..++.+|||++++
T Consensus 312 pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~~~~~~~~~~~~~~~~vssw~~~~ 389 (453)
T 2xr7_A 312 PPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--SWFKEYDKVDAKRSLSVAGSPKLD 389 (453)
T ss_dssp SCCCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--CTTSCCCCSCGGGEEEECSCSSCC
T ss_pred CCCCcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--HHHHHHHhhccCCcEEEeccccCC
Confidence 99999999999999999999999995 8999999999999999 5788 8988 8887655442 3679999999999
Q ss_pred ccccccCCCccccccccccccCc--EEEEeeCCCCCCcEEEEEeCChHHHHHHHHHHHhhhC
Q 012689 399 FSKVEYPWGKPKYSCPVVYHKKD--IILLFPNIDNDNGVNVLVSLPSKEMVEFESLFNKFLA 458 (458)
Q Consensus 399 ~~~~DFG~G~P~~~~~~~~~~~g--~~~i~p~~~~~gg~ev~v~L~~~~m~~l~~~~~~~~~ 458 (458)
+|++|||||+|.++++...+.+| .++++|+++++||++|.|+|++++|++|+++|.+.++
T Consensus 390 ~y~~DFG~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~~~~~~~~ 451 (453)
T 2xr7_A 390 LYAADFGWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAAMFTHGIS 451 (453)
T ss_dssp GGGCCCSSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHHHHHHHHT
T ss_pred ccccccCCCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHHHHHHHhh
Confidence 99999999999999987766678 8888998888899999999999999999999998764
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=9.4e-75 Score=596.10 Aligned_cols=429 Identities=23% Similarity=0.307 Sum_probs=333.2
Q ss_pred CCCcceEEEEeeEEEeCCCC-CCCCeeeCCcccccc--ccceeEEEEecCCCCCC--ChhhHHHHHHHHHhhcccccccC
Q 012689 14 LPQDLKVTIHHSSLVFPSQE-TEKKSLFLSNIDQVL--NFSVETVHFFESHKDFP--PHVVAEKLRNTLGKILVPYDFLA 88 (458)
Q Consensus 14 ~~~~~~v~~~~~~~v~p~~~-~~~~~~~LS~lD~~~--~~y~~~~~~f~~~~~~~--~~~~~~~L~~sL~~~L~~~p~La 88 (458)
|.+..+|+|.++++|+|+.+ ++.+.++||.||+.+ ..|++.+|||+.+.... .+..+++||+||+++|.+||+||
T Consensus 1 ~~~~~~v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plA 80 (454)
T 2e1v_A 1 MASLPILTVLEQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFV 80 (454)
T ss_dssp -----CEEEEEEEEECCCTTSCCCEEEECCHHHHTTTTCCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGGG
T ss_pred CCCCceEEEEEEEEEeCCCCCCCCceecCchHHhhhhccCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhccccc
Confidence 45567899999999999987 567899999999986 56999999998653211 22368999999999999999999
Q ss_pred cEEE-eeCCCCcEEEEec-CCceEEEEEeccCcccccCCCCC-CCcccccccccccCCCCCCCCCCCCeEEEEEeEEecC
Q 012689 89 GRLK-ANAKTGKMEIDCN-AAGAVFIVASSEYKLDDIGDLVY-PNPGFKQLIINSSFDDNLLEQDDKPLCIFQVTSFKCG 165 (458)
Q Consensus 89 Grl~-~~~~~G~~~i~~~-~~gv~f~~~~~~~s~~~l~~~~~-p~~~~~~l~p~~~~~~~~~~~~~~P~l~vqvt~f~~g 165 (458)
|||+ .++++|+++|+|+ ++||.|++++++.+++++.+... +...++.|+|....+....+..+.|++.+|||+|.||
T Consensus 81 GRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cg 160 (454)
T 2e1v_A 81 GKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQ 160 (454)
T ss_dssp SEEEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETTT
T ss_pred eeeeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecCC
Confidence 9998 6546899999999 59999999999999999964332 3345677877643110001113459999999999999
Q ss_pred eEEEEecccccccchhhHHHHHHHHHHHhc-CCC-C-----CCCCCCCcccccCCCCCCCCCCccccccCCCCCCCCCCC
Q 012689 166 GFSIGTSTNHATFDGLSFKVFLDNLAALAA-DKP-L-----AIIPCNDRRLLAARSPPRVTFDHPEMLKLKMPFGEESNN 238 (458)
Q Consensus 166 G~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r-g~~-~-----~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~~p~~~~~~~ 238 (458)
|++||+++||.++||.|+.+|+++||++|| |.. . ...|++|| ++. +|+ . .+................
T Consensus 161 G~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~--~p~-~--~~~~~~~~~~~~~~~~~~ 234 (454)
T 2e1v_A 161 GIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-IIK--YPM-L--DEAYLKRAKVESFNEDYV 234 (454)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCC--CHH-H--HHHHHHHTTCTTHHHHCC
T ss_pred cEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc-cCC--CCC-c--chHHHHhhhccccccccC
Confidence 999999999999999999999999999999 863 1 45689999 764 232 1 111000110000000000
Q ss_pred CCCccCccCCceEEEEEeCHHHHHHHHHHhhhcccccCCcccchHHHHHHHHHHHHHhhcccccCCCCCceEEEEEEeeC
Q 012689 239 APIFDITQEDLDFKIFRLTPDDIANLKEKAKATVEYENSRYITGFNVVSALIWRCKALSYDHAKGKTPERESRMLYAVDI 318 (458)
Q Consensus 239 ~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~~~~~l~~~vd~ 318 (458)
..... ...+...++|+|++++|++||+++.++.. ...++|++|+|+|++|+|+++|| +++.+++.++||+
T Consensus 235 ~~~~~-~~~~~~~~~f~f~~~~i~~LK~~a~~~~~--~~~~~St~d~l~A~lWr~~~~Ar-------~~~~~~l~~~vd~ 304 (454)
T 2e1v_A 235 TQSLA-GPSDKLRATFILTRAVINQLKDRVLAQLP--TLEYVSSFTVACAYIWSCIAKSR-------NDKLQLFGFPIDR 304 (454)
T ss_dssp CCCCC-CCCCEEEEEEEECHHHHHHHHHHHHHHCT--TCSCCCHHHHHHHHHHHHHHHHH-------CCSEEEEEEEEEC
T ss_pred cccCC-CCCCceEEEEEECHHHHHHHHHHHhhcCC--CCCcccHHHHHHHHHHHHHhhhc-------CCCceEEEEEecc
Confidence 00000 23467799999999999999999976542 12679999999999999999998 3578999999999
Q ss_pred CCCCCCCCCCCccccceeeeccccchhhhcc-CcHHHHHHHHHHHHhcCCHHH----HHH-HHHHhhhccCC-CCCcEEE
Q 012689 319 RPRLNPPLPASYVGNAVLSAYANAKCEELKE-KPFSRLVEMVSEGAKRMSDEY----ARS-AIDWGETYKGF-PHGEFLV 391 (458)
Q Consensus 319 R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~-~~l~~~A~~iR~ai~~~~~~~----~~~-~~~~~~~~~~~-~~~~~~~ 391 (458)
|+|++||+|++|+||++..+.+.++++||.+ .+|+.+|..||+++.++++++ +++ ..+|++..+.+ +..++.+
T Consensus 305 R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 384 (454)
T 2e1v_A 305 RARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDLVSEGMPTTMTWV 384 (454)
T ss_dssp GGGSSSCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CHHHHHCCCSEEEEE
T ss_pred hhccCCCCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhcCCceEEE
Confidence 9999999999999999999999999999995 899999999999999987444 454 55566543332 2357999
Q ss_pred ccCccccccccccCCCccccccccccccCcEEEEeeCCCCCCcEEEEEeCChHHHHHHHHHHHhhhC
Q 012689 392 SSWWKLGFSKVEYPWGKPKYSCPVVYHKKDIILLFPNIDNDNGVNVLVSLPSKEMVEFESLFNKFLA 458 (458)
Q Consensus 392 tsw~~~~~~~~DFG~G~P~~~~~~~~~~~g~~~i~p~~~~~gg~ev~v~L~~~~m~~l~~~~~~~~~ 458 (458)
|||+++++|++|||||+|.++++...+.+|.++++|+++++||++|.|+|++++|++|+++|.+.++
T Consensus 385 ssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~~~~~~~~ 451 (454)
T 2e1v_A 385 SGTPKLRFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVHIFDDGLK 451 (454)
T ss_dssp ECCTTSCGGGCCSSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHHHHHHHC-
T ss_pred ecCCCCCcccccccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999877666799999999888899999999999999999999998763
No 4
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=4.9e-73 Score=577.50 Aligned_cols=405 Identities=23% Similarity=0.426 Sum_probs=329.7
Q ss_pred ceEEEEeeEEEeCCCCCCC--CeeeCCcccccc-ccceeEEEEecCCCCC--CChhhHHHHHHHHHhhcccccccCcEEE
Q 012689 18 LKVTIHHSSLVFPSQETEK--KSLFLSNIDQVL-NFSVETVHFFESHKDF--PPHVVAEKLRNTLGKILVPYDFLAGRLK 92 (458)
Q Consensus 18 ~~v~~~~~~~v~p~~~~~~--~~~~LS~lD~~~-~~y~~~~~~f~~~~~~--~~~~~~~~L~~sL~~~L~~~p~LaGrl~ 92 (458)
|+|++.++++|+|+.|++. +.++||.||+.. +.|++.+|||+.++.. +...++++||+||+++|.+||+|||||+
T Consensus 3 m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~ 82 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRIN 82 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEEE
T ss_pred ceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccccC
Confidence 7899999999999998875 589999999988 8999999999865431 2335799999999999999999999996
Q ss_pred eeCCCCcEEEEecCCceEEEEEeccCcccccCCCCCCC-cccccccccccCCCCCCCCCCCCeEEEEEeEEecCeEEEEe
Q 012689 93 ANAKTGKMEIDCNAAGAVFIVASSEYKLDDIGDLVYPN-PGFKQLIINSSFDDNLLEQDDKPLCIFQVTSFKCGGFSIGT 171 (458)
Q Consensus 93 ~~~~~G~~~i~~~~~gv~f~~~~~~~s~~~l~~~~~p~-~~~~~l~p~~~~~~~~~~~~~~P~l~vqvt~f~~gG~~l~~ 171 (458)
. +++|+|+++||.|++++++++++|+.+.. |. ..++.|+|...-+.......+.|++.+|||+|.|||++||+
T Consensus 83 ~-----~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~-p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~ 156 (421)
T 2bgh_A 83 V-----NSSVDCNDSGVPFVEARVQAQLSQAIQNV-VELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGV 156 (421)
T ss_dssp T-----TTEEECCCCCEEEEEEEESSCHHHHHSCC-SSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCEEEEE
T ss_pred C-----CcEEEEcCCceEEEEEEEcCCHHHHhccC-CChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCEEEEE
Confidence 2 58999999999999999999999985432 33 34577877652000000135689999999999999999999
Q ss_pred cccccccchhhHHHHHHHHHHHhcCCCCCCCCCCCc-ccccCCCCCCCCCCccccccCCCCCCCCCCCCCCccCccCCce
Q 012689 172 STNHATFDGLSFKVFLDNLAALAADKPLAIIPCNDR-RLLAARSPPRVTFDHPEMLKLKMPFGEESNNAPIFDITQEDLD 250 (458)
Q Consensus 172 ~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr-~~l~~~~~p~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 250 (458)
++||.++||.|+.+|+++||++|||......|++|| +.+. ++... .+. | ... ...++.
T Consensus 157 ~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~~l~---p~~~~--~~~------~--------~~~--~~~~~~ 215 (421)
T 2bgh_A 157 NLSHKIADVLSLATFLNAWTATCRGETEIVLPNFDLAARHF---PPVDN--TPS------P--------ELV--PDENVV 215 (421)
T ss_dssp EEETTTCCHHHHHHHHHHHHHHHTTCSCCCCCBCSHHHHHS---CCCTT--CCC------C--------CCC--CCSSEE
T ss_pred EeeEEechHHHHHHHHHHHHHHhcCCCCCCCCccccccccC---CCccc--CCC------C--------ccC--CccceE
Confidence 999999999999999999999999975446789999 6553 21000 000 1 000 124688
Q ss_pred EEEEEeCHHHHHHHHHHhhhcccccCCcccchHHHHHHHHHHHHHhhcccccCCCCCceEEEEEEeeCCCCCCCCCCCCc
Q 012689 251 FKIFRLTPDDIANLKEKAKATVEYENSRYITGFNVVSALIWRCKALSYDHAKGKTPERESRMLYAVDIRPRLNPPLPASY 330 (458)
Q Consensus 251 ~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y 330 (458)
.++|+|++++|++||+++.++.. ..++|++|+|+|++|+|+++||.. ..++++.+.+.++||+|+|++||+|++|
T Consensus 216 ~~~f~f~~~~i~~LK~~a~~~~~---~~~~St~d~l~A~iW~~~~~Ar~~--~~~~~~~~~l~~~vd~R~rl~pplP~~y 290 (421)
T 2bgh_A 216 MKRFVFDKEKIGALRAQASSASE---EKNFSRVQLVVAYIWKHVIDVTRA--KYGAKNKFVVVQAVNLRSRMNPPLPHYA 290 (421)
T ss_dssp EEEEEECHHHHHHHHHHTC--------CCCCHHHHHHHHHHHHHHHHHHH--HSCCCSCEEEEEEEESGGGSSSCCCTTB
T ss_pred EEEEEECHHHHHHHHHHhhccCC---CCCCchhHhHHHHHHHHHHHHhcc--cCCCCCceEEEEEecCccccCCCCCCCc
Confidence 99999999999999999976542 367999999999999999999832 1135678999999999999999999999
Q ss_pred cccceeeeccccchhhhccCcHHHHHHHHHHHHhcCCHHHHHHHHHHhhhccCCCC-CcEEEccCccccccccccCCCcc
Q 012689 331 VGNAVLSAYANAKCEELKEKPFSRLVEMVSEGAKRMSDEYARSAIDWGETYKGFPH-GEFLVSSWWKLGFSKVEYPWGKP 409 (458)
Q Consensus 331 ~GN~~~~~~~~~~~~~l~~~~l~~~A~~iR~ai~~~~~~~~~~~~~~~~~~~~~~~-~~~~~tsw~~~~~~~~DFG~G~P 409 (458)
+||++..+.+..++++ +.+|+++|..||+++.++++++++...++.+.....+. ..+.+|||+++++|++|||||+|
T Consensus 291 ~GN~~~~~~~~~~~~~--~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~DFGwGkP 368 (421)
T 2bgh_A 291 MGNIATLLFAAVDAEW--DKDFPDLIGPLRTSLEKTEDDHNHELLKGMTCLYELEPQELLSFTSWCRLGFYDLDFGWGKP 368 (421)
T ss_dssp CSCCEEEEEEEECTTC--CCCGGGGHHHHHHHTCCCSSCHHHHHHHHHHHHHTSCGGGEEEEEEETTSCGGGCCSSSCCC
T ss_pred cceEEEEEEEEecccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEeccccCCCcccccCCCcc
Confidence 9999999988888776 78999999999999999999999988777654322222 46999999999999999999999
Q ss_pred ccccccccccCcEEEEeeCCCCCCcEEEEEeCChHHHHHHHHHHHhhh
Q 012689 410 KYSCPVVYHKKDIILLFPNIDNDNGVNVLVSLPSKEMVEFESLFNKFL 457 (458)
Q Consensus 410 ~~~~~~~~~~~g~~~i~p~~~~~gg~ev~v~L~~~~m~~l~~~~~~~~ 457 (458)
.++++...+.+|+++++|++++ +|++|.|+|++++|++|+++|.++.
T Consensus 369 ~~v~~~~~~~~g~~~~~p~~~~-~gi~v~v~L~~~~m~~f~~e~~~~~ 415 (421)
T 2bgh_A 369 LSACTTTFPKRNAALLMDTRSG-DGVEAWLPMAEDEMAMLPVELLSLV 415 (421)
T ss_dssp SEEECCCCCSTTEEEEEECTTS-SSEEEEEEEEHHHHHHSCHHHHTTB
T ss_pred CeecccccCcCCEEEEEecCCC-CeEEEEEEcCHHHHHHHHHHHHHhh
Confidence 9999877666899999998875 5899999999999999999988763
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=1.7e-64 Score=519.74 Aligned_cols=404 Identities=17% Similarity=0.273 Sum_probs=312.2
Q ss_pred eeeCCcccccc---ccceeEEEEecCCCCCCChhhHHHHHHHHHhhcccccccCcEEEeeC----CCCcEEEEecCCceE
Q 012689 38 SLFLSNIDQVL---NFSVETVHFFESHKDFPPHVVAEKLRNTLGKILVPYDFLAGRLKANA----KTGKMEIDCNAAGAV 110 (458)
Q Consensus 38 ~~~LS~lD~~~---~~y~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~----~~G~~~i~~~~~gv~ 110 (458)
.++||.|||+. +.|++.++||+.++....+..+++||+||+++|.+||+|||||+.++ .+|+++|+|++.+..
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~~ 83 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVPR 83 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSCE
T ss_pred cccCChhhcCccccccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCCe
Confidence 36899999985 78999999998543212234789999999999999999999998864 369999998776677
Q ss_pred EEEEeccC-----cccccCCCCCCCcccc--cccccccCCCC--CCCCCCCCeEEEEEeEEecCeEEEEecccccccchh
Q 012689 111 FIVASSEY-----KLDDIGDLVYPNPGFK--QLIINSSFDDN--LLEQDDKPLCIFQVTSFKCGGFSIGTSTNHATFDGL 181 (458)
Q Consensus 111 f~~~~~~~-----s~~~l~~~~~p~~~~~--~l~p~~~~~~~--~~~~~~~P~l~vqvt~f~~gG~~l~~~~~H~v~Dg~ 181 (458)
|++++++. +++++.+..+|...++ .+.|...++.. .....+.|++.+||| |.|||++||+++||+++||.
T Consensus 84 ~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT-~~~GG~~lg~~~~H~v~Dg~ 162 (451)
T 2rkv_A 84 VVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLN-FIKGGLILTVNGQHGAMDMV 162 (451)
T ss_dssp EEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEE-EEBTEEEEEEEEETTTCCHH
T ss_pred EEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEE-EecCceeeeeeehhccccHH
Confidence 98887764 6777754445544442 24443322211 112345899999999 66999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCCC----CCCCCcccccC---CCCCCCCCCccccccCCCCCCCCCCCCCCccCccCCceEEEE
Q 012689 182 SFKVFLDNLAALAADKPLAI----IPCNDRRLLAA---RSPPRVTFDHPEMLKLKMPFGEESNNAPIFDITQEDLDFKIF 254 (458)
Q Consensus 182 ~~~~fl~~wa~~~rg~~~~~----~P~~dr~~l~~---~~~p~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~f 254 (458)
|+.+|+++||++|||.+.+. .|++||+.+.+ +.+|.....+.+|...+ . .. ... ....++..++|
T Consensus 163 g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~--~-~~---~~~--~~~~~~~~~~f 234 (451)
T 2rkv_A 163 GQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADV--A-GG---DAV--LTPVSASWAFF 234 (451)
T ss_dssp HHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTS--C-C------------CCEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCccccccccCchhhccccccccCCCccccccccCCCC--C-CC---CCC--CCCCCceEEEE
Confidence 99999999999999976432 57899975432 12332222333332211 0 00 000 12356789999
Q ss_pred EeCHHHHHHHHHHhhhcccccCCcccchHHHHHHHHHHHHHhhcccccCCCCCceEEEEEEeeCCCCCCCCCCCCccccc
Q 012689 255 RLTPDDIANLKEKAKATVEYENSRYITGFNVVSALIWRCKALSYDHAKGKTPERESRMLYAVDIRPRLNPPLPASYVGNA 334 (458)
Q Consensus 255 ~~~~~~l~~Lk~~~~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~ 334 (458)
+|++++|++||+++.++.. ....++|++|+|+|++|||+++||.. ..++++.+++.++||+|+|++ +|.+|+||+
T Consensus 235 ~f~~~~i~~LK~~a~~~~~-~~~~~~St~d~l~A~~Wr~~~~Ar~~--~~~~~~~~~l~~~vd~R~rl~--lP~~y~GN~ 309 (451)
T 2rkv_A 235 TFSPKAMSELKDAATKTLD-ASTKFVSTDDALSAFIWKSASRVRLE--RIDGSAPTEFCRAVDARPAMG--VSNNYPGLL 309 (451)
T ss_dssp EECHHHHHHHHHHHHTTCC-TTCSCCCHHHHHHHHHHHHHHHHHTT--TSCTTSEEEEEEEEECHHHHT--CCTTCCSCC
T ss_pred EECHHHHHHHHHHHhhhcc-CCCCCccHHHHHHHHHHHHHHHHHhc--cCCCCCceEEEEEecccccCC--CCCCCcccc
Confidence 9999999999999976532 01367999999999999999999831 246788999999999999998 899999999
Q ss_pred eeeeccccchhhhccCcHHHHHHHHHHHHhcCCHHH-HHHHHHHhhhccCC----------CCCcEEEccCccccccccc
Q 012689 335 VLSAYANAKCEELKEKPFSRLVEMVSEGAKRMSDEY-ARSAIDWGETYKGF----------PHGEFLVSSWWKLGFSKVE 403 (458)
Q Consensus 335 ~~~~~~~~~~~~l~~~~l~~~A~~iR~ai~~~~~~~-~~~~~~~~~~~~~~----------~~~~~~~tsw~~~~~~~~D 403 (458)
+..+.+..+++||.+.+|+++|..||+++.+++.++ +++.++|++..++. +..++.+|||+++++|++|
T Consensus 310 ~~~~~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~D 389 (451)
T 2rkv_A 310 QNMTYHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLATYLHNNPDKSNVSLTADADPSTSVMLSSWAKVGLWDYD 389 (451)
T ss_dssp EEEEEEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTBCTTTTCCTTTCEEEEECTTCCGGGCC
T ss_pred eeeecccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHHHHhcCCCccccccccccCCCCCEEEeccccCCccccc
Confidence 999999889999999999999999999999998887 99999999875431 1256999999999999999
Q ss_pred cC--CCccccccccc-cccCcEEEEeeCCCCCCcEEEEEeCChHHHHHHHH--HHHhh
Q 012689 404 YP--WGKPKYSCPVV-YHKKDIILLFPNIDNDNGVNVLVSLPSKEMVEFES--LFNKF 456 (458)
Q Consensus 404 FG--~G~P~~~~~~~-~~~~g~~~i~p~~~~~gg~ev~v~L~~~~m~~l~~--~~~~~ 456 (458)
|| ||+|.+++... ...+|.++++|.. ++||++|.|+|++++|++|++ +|.++
T Consensus 390 FG~gwG~P~~v~~~~~~~~~g~~~~~p~~-~~ggi~v~v~L~~~~m~~f~~d~ef~~~ 446 (451)
T 2rkv_A 390 FGLGLGKPETVRRPIFEPVESLMYFMPKK-PDGEFCAALSLRDEDMDRLKADKEWTKY 446 (451)
T ss_dssp TTCSSCSCSEEECCBCSCCTTEEEECCCC-TTSCEEEEEEEEHHHHHHHHHCHHHHTT
T ss_pred cCCCCCCceEEEcCCccCCCCEEEEecCC-CCCCEEEEEEeCHHHHHHHhcCHHHHhh
Confidence 98 89999998544 3457999999864 478999999999999999998 56554
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.19 E-value=6.3e-09 Score=104.56 Aligned_cols=292 Identities=17% Similarity=0.139 Sum_probs=164.4
Q ss_pred CCeeeCCcccccc---ccceeEEEEecCCCCCCChhhHHHHHHHHHhhcccccccCcEEEeeCCCCcEEEEecCCceE-E
Q 012689 36 KKSLFLSNIDQVL---NFSVETVHFFESHKDFPPHVVAEKLRNTLGKILVPYDFLAGRLKANAKTGKMEIDCNAAGAV-F 111 (458)
Q Consensus 36 ~~~~~LS~lD~~~---~~y~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~G~~~i~~~~~gv~-f 111 (458)
...+|||++++.+ .+++...+-++.+ .+.++|+++|.+++..+|.|-.++...+ +|.+++........ +
T Consensus 5 ~~~~pls~~Q~~~~~~~y~~~~~~~l~g~------ld~~~l~~A~~~lv~rh~~LRt~f~~~~-~~~~q~v~~~~~~~~~ 77 (422)
T 1q9j_A 5 SVIRKLSHSEEVFAQYEVFTSMTIQLRGV------IDVDALSDAFDALLETHPVLASHLEQSS-DGGWNLVADDLLHSGI 77 (422)
T ss_dssp SEEEECCHHHHHHHHTTCEEEEEEEEESC------CCHHHHHHHHHHHHHHCGGGSEEEEECT-TSSEEEEECCSSSCCC
T ss_pred ceeecCCHHHHHHHhcCceEEEEEEEecC------CCHHHHHHHHHHHHHhCccceEEEEecC-CcceeeeccCCCCCce
Confidence 3568999999866 3333334444432 3689999999999999999999998742 33344433322211 2
Q ss_pred EEEeccCcccccCCCCCCCcccccccccccCCCCCCCCCCCCeEEEEEeEEecCeEEEEecccccccchhhHHHHHHHHH
Q 012689 112 IVASSEYKLDDIGDLVYPNPGFKQLIINSSFDDNLLEQDDKPLCIFQVTSFKCGGFSIGTSTNHATFDGLSFKVFLDNLA 191 (458)
Q Consensus 112 ~~~~~~~s~~~l~~~~~p~~~~~~l~p~~~~~~~~~~~~~~P~l~vqvt~f~~gG~~l~~~~~H~v~Dg~~~~~fl~~wa 191 (458)
.+. ++...... ..+..- ..+ .+ ...|++.+.+.. ..++..|.+.+||.++||.|+..|++.|.
T Consensus 78 ~~~-------d~~~~~~~-~~~~~~--~~~-----~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~ 140 (422)
T 1q9j_A 78 CVI-------DGTAATNG-SPSGNA--ELR-----LD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELF 140 (422)
T ss_dssp EEE-------C-------------C--CCC-----CC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHH
T ss_pred EEE-------ECCCCCcc-hhhhcc--cCc-----cC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHH
Confidence 111 11100000 011000 011 12 456889888876 66789999999999999999999999999
Q ss_pred HHhc-----CCCCCCCC--CCCc--ccccCCC-----CCCCCCCccccccCCCCCCCCCCCCCCccCccCCceEEEEEeC
Q 012689 192 ALAA-----DKPLAIIP--CNDR--RLLAARS-----PPRVTFDHPEMLKLKMPFGEESNNAPIFDITQEDLDFKIFRLT 257 (458)
Q Consensus 192 ~~~r-----g~~~~~~P--~~dr--~~l~~~~-----~p~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~f~~~ 257 (458)
+.++ |.+...+| +.+- .....+. .+.......+||.-..+.......... ...........+.++
T Consensus 141 ~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~-~~~~~~~~~~~~~l~ 219 (422)
T 1q9j_A 141 SRYTDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAH-PGLPQAVPVTRLWLS 219 (422)
T ss_dssp HHHHHHHHSSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC--------------CCSBCCCCEEEECCC
T ss_pred HHHHHhhccCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCC-CCCCCCccceEEEeC
Confidence 9886 43332222 2121 1110010 000000112444321110000000000 011223467888999
Q ss_pred HHHHHHHHHHhhhcccccCCcccchHHHHHHHHHHHHHhhcccccCCCCCceEEEEEEeeCCCCCCCCCCCCccccceee
Q 012689 258 PDDIANLKEKAKATVEYENSRYITGFNVVSALIWRCKALSYDHAKGKTPERESRMLYAVDIRPRLNPPLPASYVGNAVLS 337 (458)
Q Consensus 258 ~~~l~~Lk~~~~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~ 337 (458)
.+..++|++.|++.+ +|.++++.|.+...+.+-+ ..+.....+..++++|....|+++..=+.|.+++
T Consensus 220 ~~~~~~l~~~a~~~~-------~t~~~~l~aa~~~~l~r~~-----~~~~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~ 287 (422)
T 1q9j_A 220 KQQTSDLMAFGREHR-------LSLNAVVAAAILLTEWQLR-----NTPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGA 287 (422)
T ss_dssp HHHHHHHHHHHTTTT-------CCHHHHHHHHHHHHHHHHH-----TCSSCCEEEEEEEETTTTSSSCCCTTTBSCCEEE
T ss_pred HHHHHHHHHHHHHhC-------CCHHHHHHHHHHHHHHhcc-----cCCCceEEEeeeeecccccCCCCChhhhhhhhee
Confidence 999999999997655 8999999998766665442 1345678899999999987654431112333333
Q ss_pred eccccchhhhccCcHHHHHHHHHHHHhcC
Q 012689 338 AYANAKCEELKEKPFSRLVEMVSEGAKRM 366 (458)
Q Consensus 338 ~~~~~~~~~l~~~~l~~~A~~iR~ai~~~ 366 (458)
....++.. .+.++.+++..+++.+.+.
T Consensus 288 f~n~lp~~--~~~~~~~~l~~v~~~~~~~ 314 (422)
T 1q9j_A 288 ASYLAEIG--PNTDIVDLASDIVATLRAD 314 (422)
T ss_dssp EEEEECCC--SSCCHHHHHHHHHHHHHHH
T ss_pred eeeeeecc--CCCCHHHHHHHHHHHHHHH
Confidence 33333322 1346778888888777653
No 7
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.78 E-value=4.7e-08 Score=100.59 Aligned_cols=293 Identities=11% Similarity=0.022 Sum_probs=162.1
Q ss_pred CCeeeCCcccccc----c----cceeEEEEecCCCCCCChhhHHHHHHHHHhhcccccccCcEEEeeCCCCcEEEEecCC
Q 012689 36 KKSLFLSNIDQVL----N----FSVETVHFFESHKDFPPHVVAEKLRNTLGKILVPYDFLAGRLKANAKTGKMEIDCNAA 107 (458)
Q Consensus 36 ~~~~~LS~lD~~~----~----~y~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~G~~~i~~~~~ 107 (458)
...+|||+.-+-+ . ......+.|..... .+.++|++++.+++..+|.|--++... +|.+. .....
T Consensus 11 ~~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g~----ld~~~L~~A~~~lv~rh~~LRt~f~~~--~~~~~-~v~~~ 83 (493)
T 4hvm_A 11 PGLRRASFLQRGAWRWLREAPPAAAFAARGLLGSGR----IDDDRLAAAADEVLDAFPLLRVNFVDD--DGLWM-RTREN 83 (493)
T ss_dssp -CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEESS----CCHHHHHHHHHHHHHHCGGGGEEEEES--SSEEE-EECSC
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeCC----CCHHHHHHHHHHHHHhchhceeEEEcc--CCEEE-EecCC
Confidence 5789999987532 1 11223344443321 479999999999999999999999874 46655 43322
Q ss_pred ceEEEEEeccCcccccCCCCCCCccc----ccccccccCCCCCCCCCCCCeEEEEEeEEecCeEEEEecccccccchhhH
Q 012689 108 GAVFIVASSEYKLDDIGDLVYPNPGF----KQLIINSSFDDNLLEQDDKPLCIFQVTSFKCGGFSIGTSTNHATFDGLSF 183 (458)
Q Consensus 108 gv~f~~~~~~~s~~~l~~~~~p~~~~----~~l~p~~~~~~~~~~~~~~P~l~vqvt~f~~gG~~l~~~~~H~v~Dg~~~ 183 (458)
.+.+.+.+. .....+...+ ....- .+| +....|++.+.+.....+...|.+.+||.++||.|+
T Consensus 84 ~~~~~~~d~-------~~~~~~~~~~~~~~~~~~~-~~f-----dl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~ 150 (493)
T 4hvm_A 84 ADALVRSDL-------RGHPDPQARCVELLRADRD-RPT-----DPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSR 150 (493)
T ss_dssp CCCEEEEEC-------TTSSSHHHHHHHHHHHHHS-SCC-----CTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHH
T ss_pred CCCceEEEC-------CCCCchHHHHHHHHHHHhc-CCC-----CCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHH
Confidence 244433221 1100000011 11111 111 223458888888766666789999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCcccccCC--CCCCCC-CCccccccC--C-CCCCCCCCCCCCccCccCCceEEEEEeC
Q 012689 184 KVFLDNLAALAADKPLAIIPCNDRRLLAAR--SPPRVT-FDHPEMLKL--K-MPFGEESNNAPIFDITQEDLDFKIFRLT 257 (458)
Q Consensus 184 ~~fl~~wa~~~rg~~~~~~P~~dr~~l~~~--~~p~~~-~~~~~~~~~--~-~p~~~~~~~~~~~~~~~~~~~~~~f~~~ 257 (458)
..|++.+.+.+.|...+ .++.|-...... ...... .....||.- . .|. . ..............+.++
T Consensus 151 ~~l~~~l~~~Y~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~-l-----~~~~~~~~~~~~~~~~l~ 223 (493)
T 4hvm_A 151 YMVLGAVWQAYYGRFRP-AQYRDFAEVADFHPLDRETVRVARHRWWSRRLPALPV-R-----GGDGGPVGPPETSRLRVP 223 (493)
T ss_dssp HHHHHHHHHHHTTCCCG-GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCC-C-----C-------CCEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCCC-cCHHHHHHHHhhhhcccChhhHHHHHHHHHhccCCCC-C-----CCCCCCCCCCeeEEEEcC
Confidence 99999999999886543 222221000000 000000 011234421 1 111 0 001111122677889999
Q ss_pred HHHHHHHHHHhhhcccccCCcccc--hHHHHHHHHHHHHHhhccc----ccCCCCCceEEEEEEeeCCCCCCCCCCCCcc
Q 012689 258 PDDIANLKEKAKATVEYENSRYIT--GFNVVSALIWRCKALSYDH----AKGKTPERESRMLYAVDIRPRLNPPLPASYV 331 (458)
Q Consensus 258 ~~~l~~Lk~~~~~~~~~~~~~~~S--~~d~l~A~lW~~~~~ar~~----~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~ 331 (458)
.+..++|++.|++.+ +| .+.++.|.+-..+.+-+.. .........+.+..++++|.. +--.+.+
T Consensus 224 ~~~~~~l~~~a~~~~-------vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~---~~~~~~v 293 (493)
T 4hvm_A 224 GSRWQALTEPGGPLG-------GNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDH---LQLGSVV 293 (493)
T ss_dssp HHHHHHHHCC-------------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHH---TTCCSBC
T ss_pred HHHHHHHHHHHHHcC-------CCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCC---cchhcCe
Confidence 999999998887654 78 9999999865444333100 000034567899999999965 2345777
Q ss_pred ccceeeeccccchhhhccCcHHHHHHHHHHHHhc
Q 012689 332 GNAVLSAYANAKCEELKEKPFSRLVEMVSEGAKR 365 (458)
Q Consensus 332 GN~~~~~~~~~~~~~l~~~~l~~~A~~iR~ai~~ 365 (458)
|+++......+..+...+.++.+++..+++.+.+
T Consensus 294 G~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~ 327 (493)
T 4hvm_A 294 GPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLD 327 (493)
T ss_dssp SCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHH
T ss_pred EeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHH
Confidence 8887766555544332245677777777776654
No 8
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.76 E-value=4.6e-06 Score=86.21 Aligned_cols=288 Identities=12% Similarity=0.073 Sum_probs=163.9
Q ss_pred CCeeeCCcccccc-----------ccceeEEEEecCCCCCCChhhHHHHHHHHHhhcccccccCcEEEeeCCCCcEEEEe
Q 012689 36 KKSLFLSNIDQVL-----------NFSVETVHFFESHKDFPPHVVAEKLRNTLGKILVPYDFLAGRLKANAKTGKMEIDC 104 (458)
Q Consensus 36 ~~~~~LS~lD~~~-----------~~y~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~G~~~i~~ 104 (458)
...+|||+..+.+ .+.+...+-++.. .+.+.|++++.+++...|.|--++... +|.+.-..
T Consensus 94 ~~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~------ld~~~l~~A~~~lv~rh~~LRt~f~~~--~~~~~q~v 165 (520)
T 2jgp_A 94 QAYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGK------LERTRVEAAFQRLIARHESLRTSFAVV--NGEPVQNI 165 (520)
T ss_dssp CSSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEEC------CCHHHHHHHHHHHHHHCGGGGEEEEEE--TTEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCC------CCHHHHHHHHHHHHHHhHhheeEEEee--CCEEEEEE
Confidence 4678999876532 1223444445433 468999999999999999999999874 35543222
Q ss_pred -cCCceEEEEEeccCcccccCCCCCCCcccccccccccCCCCCCCCCCCCeEEEEEeEEecCeEEEEecccccccchhhH
Q 012689 105 -NAAGAVFIVASSEYKLDDIGDLVYPNPGFKQLIINSSFDDNLLEQDDKPLCIFQVTSFKCGGFSIGTSTNHATFDGLSF 183 (458)
Q Consensus 105 -~~~gv~f~~~~~~~s~~~l~~~~~p~~~~~~l~p~~~~~~~~~~~~~~P~l~vqvt~f~~gG~~l~~~~~H~v~Dg~~~ 183 (458)
....+.+...+. +-+++. .+.... ..+| +....|++.+.+.....+...|.+.+||.++||.|+
T Consensus 166 ~~~~~~~~~~~~~--~~~~~~-------~~~~~~-~~~f-----dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~ 230 (520)
T 2jgp_A 166 HEDVPFALAYSEV--TEEEAR-------ELVSSL-VQPF-----DLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSS 230 (520)
T ss_dssp CSCCCCCCEEEEC--CHHHHH-------HHHHHT-CCCC-----CTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHH
T ss_pred CCCCCCceEEEeC--CHHHHH-------HHHHHh-cCCC-----CCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHH
Confidence 222222211111 101110 010000 0111 123458888887766667899999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCcccccC-CC-CCCCC-CCcccccc--CC-CCCCCCC-CCCCCccCccCCceEEEEEe
Q 012689 184 KVFLDNLAALAADKPLAIIPCNDRRLLAA-RS-PPRVT-FDHPEMLK--LK-MPFGEES-NNAPIFDITQEDLDFKIFRL 256 (458)
Q Consensus 184 ~~fl~~wa~~~rg~~~~~~P~~dr~~l~~-~~-~p~~~-~~~~~~~~--~~-~p~~~~~-~~~~~~~~~~~~~~~~~f~~ 256 (458)
..|++.+.+.+++...+..|..-++.... +. ..... .....||. +. .+..... ...+.............+.+
T Consensus 231 ~~l~~el~~~Y~~~~l~~~~~~~~d~~~~~~~~~~~~~~~~~~~yW~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l 310 (520)
T 2jgp_A 231 GILLAEWVQLYQGDVLPELRIQYKDFAVWQQEFSQSAAFHKQEAYWLQTFADDIPVLNLPTDFTRPSTQSFAGDQCTIGA 310 (520)
T ss_dssp HHHHHHHHHHHTTCCCCCCSCCHHHHHHHHHHHTTSHHHHHHHHHHHHHTSSCCCCCCCCCSSCCCSSCCCBEEEEEEEC
T ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcChhhHHHHHHHHHHhCCCCCcCCCCCCCCCCCCCCCCccEEEEeC
Confidence 99999999999986432222100111000 00 00000 00123332 11 0100000 00000001112345678899
Q ss_pred CHHHHHHHHHHhhhcccccCCcccchHHHHHHHHHHHHHhhcccccCCCCCceEEEEEEeeCCCCCCCCCCCCcccccee
Q 012689 257 TPDDIANLKEKAKATVEYENSRYITGFNVVSALIWRCKALSYDHAKGKTPERESRMLYAVDIRPRLNPPLPASYVGNAVL 336 (458)
Q Consensus 257 ~~~~l~~Lk~~~~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~ 336 (458)
+.+..++|++.|++.+ +|.+.++.|.+-..+.+-- ....+.+..++++|..- --.+-+|+++.
T Consensus 311 ~~~~~~~l~~~a~~~~-------~T~~~~l~aa~a~~L~~~~-------~~~dv~~g~~~~gR~~~---~~~~~vG~f~n 373 (520)
T 2jgp_A 311 GKALTEGLHQLAQATG-------TTLYMVLLAAYNVLLAKYA-------GQEDIIVGTPITGRSHA---DLEPIVGMFVN 373 (520)
T ss_dssp CHHHHHHHHHHHHHHT-------CCHHHHHHHHHHHHHHHHH-------TCSCEEEEEEECCCCSG---GGTTCCSCCCE
T ss_pred CHHHHHHHHHHHHHcC-------CCHHHHHHHHHHHHHHHhc-------CCCCeEEEeccCCCCch---hhhccEEeeee
Confidence 9999999999998765 7999999987654444432 34678899999999751 23466777766
Q ss_pred eeccccchhhhccCcHHHHHHHHHHHHhc
Q 012689 337 SAYANAKCEELKEKPFSRLVEMVSEGAKR 365 (458)
Q Consensus 337 ~~~~~~~~~~l~~~~l~~~A~~iR~ai~~ 365 (458)
.....+..+ .+.++.+++..+++.+.+
T Consensus 374 ~lplr~~~~--~~~~~~~~l~~v~~~~~~ 400 (520)
T 2jgp_A 374 TLAMRNKPQ--REKTFSEFLQEVKQNALD 400 (520)
T ss_dssp EEEEEECCC--TTSBHHHHHHHHHHHHHH
T ss_pred eeeEEecCC--CCCCHHHHHHHHHHHHHH
Confidence 554444332 134677777777777654
No 9
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.70 E-value=6.1e-07 Score=90.45 Aligned_cols=257 Identities=15% Similarity=0.082 Sum_probs=146.9
Q ss_pred hhHHHHHHHHHhhcccccccCcEEEeeCCCCcEEEEecCCceEEEEEeccCcccccCCCCCCCccccccc---ccccCCC
Q 012689 68 VVAEKLRNTLGKILVPYDFLAGRLKANAKTGKMEIDCNAAGAVFIVASSEYKLDDIGDLVYPNPGFKQLI---INSSFDD 144 (458)
Q Consensus 68 ~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~G~~~i~~~~~gv~f~~~~~~~s~~~l~~~~~p~~~~~~l~---p~~~~~~ 144 (458)
.+.++|++++.+++..+|.|--++... +| .+. ....+.+.+ .++.....+...+..++ -..+|
T Consensus 33 ld~~~L~~A~~~lv~rh~~LRt~f~~~--~~--~v~-~~~~~~~~~-------~d~~~~~~~~~~~~~~~~~~~~~~f-- 98 (436)
T 1l5a_A 33 LDTTLLLRALHLTVSEIDLFRARFSAQ--GE--LYW-HPFSPPIDY-------QDLSIHLEAEPLAWRQIEQDLQRSS-- 98 (436)
T ss_dssp CCHHHHHHHHHHHHHTCGGGGEEECTT--CC--EEE-CSSCCCCEE-------EECTTCTTHHHHHHHHHHHHHTSCC--
T ss_pred CCHHHHHHHHHHHHHHhheeEEEEEec--CC--eEC-CCcCCCccE-------EeCCCCCCHHHHHHHHHHHHhcCCC--
Confidence 468999999999999999999988753 45 332 221222211 11111000000011100 00111
Q ss_pred CCCCCCCCCeEEEEEeEEecCeEEEEecccccccchhhHHHHHHHHHHHhc----CCCCCCCCCCC-ccccc---C-CCC
Q 012689 145 NLLEQDDKPLCIFQVTSFKCGGFSIGTSTNHATFDGLSFKVFLDNLAALAA----DKPLAIIPCND-RRLLA---A-RSP 215 (458)
Q Consensus 145 ~~~~~~~~P~l~vqvt~f~~gG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r----g~~~~~~P~~d-r~~l~---~-~~~ 215 (458)
+....|++.+.+.....+...|.+.+||.++||.|+..|++.+.+.+. |.+... |... ++.+. . ...
T Consensus 99 ---dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~ 174 (436)
T 1l5a_A 99 ---TLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTA-AFKPYQSYLEEEAAYLTS 174 (436)
T ss_dssp ---CCBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCC-CCCCHHHHHHHHHHHHTS
T ss_pred ---CcCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCC-CccCHHHHHHHHHHhhcc
Confidence 123458888887666668899999999999999999999999999887 544322 2110 00000 0 000
Q ss_pred CCCCCCccccccCC---CCCCCCCCCCCCccCccCCceEEEEEeCHHHHHHHHHHhhhcccccCCcccchHHHHHHHHHH
Q 012689 216 PRVTFDHPEMLKLK---MPFGEESNNAPIFDITQEDLDFKIFRLTPDDIANLKEKAKATVEYENSRYITGFNVVSALIWR 292 (458)
Q Consensus 216 p~~~~~~~~~~~~~---~p~~~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~S~~d~l~A~lW~ 292 (458)
... .....||.-. .|.... + ...............+.++.+..++|++.|+..+ +|.+.++.|.+-.
T Consensus 175 ~~~-~~~~~~W~~~l~~~~~~~~-l-p~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~~-------~t~~~~l~aa~~~ 244 (436)
T 1l5a_A 175 HRY-WQDKQFWQGYLREAPDLTL-T-SATYDPQLSHAVSLSYTLNSQLNHLLLKLANANQ-------IGWPDALVALCAL 244 (436)
T ss_dssp HHH-HHHHHHHHHHHHTSCCCCB-C-CTTCCGGGCCEEEEEEECCHHHHHHHHHHHHHTT-------CCHHHHHHHHHHH
T ss_pred HhH-HHHHHHHHHHhcCCCCccc-C-CCCCCCCcccceeeEEecCHHHHHHHHHHHHHhC-------CCHHHHHHHHHHH
Confidence 000 0012333210 110000 0 0000011223457888999999999999998765 7999999988644
Q ss_pred HHHhhcccccCCCCCceEEEEEEeeCCCCCCCCCCCCccccceeeeccccchhhhccCcHHHHHHHHHHHHhc
Q 012689 293 CKALSYDHAKGKTPERESRMLYAVDIRPRLNPPLPASYVGNAVLSAYANAKCEELKEKPFSRLVEMVSEGAKR 365 (458)
Q Consensus 293 ~~~~ar~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~l~~~A~~iR~ai~~ 365 (458)
.+.+- .+ ..+.+..++++|.. +--.+-+|+++......+..+ .+.++.+++..+++.+.+
T Consensus 245 ~L~~~-------~g-~dv~ig~~~~~R~~---~~~~~~vG~f~n~lplr~~~~--~~~t~~~~l~~v~~~~~~ 304 (436)
T 1l5a_A 245 YLESA-------EP-DAPWLWLPFMNRWG---SVAANVPGLMVNSLPLLRLSA--QQTSLGNYLKQSGQAIRS 304 (436)
T ss_dssp HHHHH-------ST-TCCEEEEEECCCTT---SGGGGSCSCCCEEEEEECCCC--TTCBHHHHHHHHHHHHHH
T ss_pred HHHHh-------hC-CceEEeeecccCCC---hHHhcCcceEEEEEEEEEecC--CCCCHHHHHHHHHHHHHH
Confidence 44332 23 67889999999964 123456677666554443332 134678888888877655
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.43 E-value=1.3e-05 Score=81.39 Aligned_cols=297 Identities=12% Similarity=0.093 Sum_probs=162.9
Q ss_pred CCeeeCCcccccc--c-----cceeEEEEecCCCCCCChhhHHHHHHHHHhhcccccccCcEEEeeCCCCcEEEEe-c--
Q 012689 36 KKSLFLSNIDQVL--N-----FSVETVHFFESHKDFPPHVVAEKLRNTLGKILVPYDFLAGRLKANAKTGKMEIDC-N-- 105 (458)
Q Consensus 36 ~~~~~LS~lD~~~--~-----~y~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~G~~~i~~-~-- 105 (458)
...+|||+..+++ . ......+.|..... .+.+.|+++|.+++...|.|--++... +|.+.-.. .
T Consensus 15 ~~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~----ld~~~L~~Al~~lv~rh~~LRt~f~~~--~~~~~q~v~~~~ 88 (466)
T 2xhg_A 15 AGNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEG----FDPKVIQSVMDKIIEHHDALRMVYQHE--NGNVVQHNRGLG 88 (466)
T ss_dssp CEECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTC----CCHHHHHHHHHHHHHHSGGGGEEEECG--GGCCEEEECCSS
T ss_pred CCCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCC----CCHHHHHHHHHHHHHhChHhheEEecC--CCceeeeccccc
Confidence 4678899887632 1 12223344443322 478999999999999999999998864 34443222 2
Q ss_pred CCceEEEEEeccCcccccCCCCCCCccccccc--ccccCCCCCCCCCCCCeEEEEEeEEecCeEEEEecccccccchhhH
Q 012689 106 AAGAVFIVASSEYKLDDIGDLVYPNPGFKQLI--INSSFDDNLLEQDDKPLCIFQVTSFKCGGFSIGTSTNHATFDGLSF 183 (458)
Q Consensus 106 ~~gv~f~~~~~~~s~~~l~~~~~p~~~~~~l~--p~~~~~~~~~~~~~~P~l~vqvt~f~~gG~~l~~~~~H~v~Dg~~~ 183 (458)
...+.+.+.+ +.........++.+. -..+| +....|++.+.+.... ++-.|-+.+||.++||.|+
T Consensus 89 ~~~~~~~~~d-------~~~~~~~~~~~~~~~~~~~~~f-----dl~~~pl~r~~l~~~~-~~~~l~l~~HH~i~Dg~S~ 155 (466)
T 2xhg_A 89 GQLYDFFSYN-------LTAQPDVQQAIEAETQRLHSSM-----NLQEGPLVKVALFQTL-HGDHLFLAIHHLVVDGISW 155 (466)
T ss_dssp SCCCEEEEEE-------CTTCSCHHHHHHHHHHHHHTTC-----CTTTCCCEEEEEEEET-TEEEEEEEEEGGGCCHHHH
T ss_pred cccceeEEEe-------cCCcccHHHHHHHHHHHHHhcc-----CCCCCCeEEEEEEEcC-CCCEEEEEeeeeeechhhH
Confidence 1223333322 111000000001000 00111 2234588888887665 4444679999999999999
Q ss_pred HHHHHHHHHHhc----CCCCCCCCC-CC-ccccc---C-CCCCCCCCCccccccCC---CCCCCCCCCCCCccCccCCce
Q 012689 184 KVFLDNLAALAA----DKPLAIIPC-ND-RRLLA---A-RSPPRVTFDHPEMLKLK---MPFGEESNNAPIFDITQEDLD 250 (458)
Q Consensus 184 ~~fl~~wa~~~r----g~~~~~~P~-~d-r~~l~---~-~~~p~~~~~~~~~~~~~---~p~~~~~~~~~~~~~~~~~~~ 250 (458)
..|++.+.+.++ |.+...+|. .. ++... . ...+.. .....||.-. .|...-...............
T Consensus 156 ~~l~~el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~-~~~~~~W~~~l~~~~~~~lp~~~~~~~~~~~~~~ 234 (466)
T 2xhg_A 156 RILFEDLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEADL-LSEIPYWESLESQAKNVSLPKDYEVTDCKQKSVR 234 (466)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHHH-HTTHHHHHHHHHHCCCCCCCCSSCCSSCBGGGEE
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCccc-hhhhHHHHHhhccCCcccCCccccccccccccce
Confidence 999999998775 443322221 00 00000 0 000000 0112333210 010000000000000122345
Q ss_pred EEEEEeCHHHHHHHHHHhhhcccccCCcccchHHHHHHHHHHHHHhhcccccCCCCCceEEEEEEeeCCCCCCC-CCCCC
Q 012689 251 FKIFRLTPDDIANLKEKAKATVEYENSRYITGFNVVSALIWRCKALSYDHAKGKTPERESRMLYAVDIRPRLNP-PLPAS 329 (458)
Q Consensus 251 ~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~~~~~l~~~vd~R~rl~p-plp~~ 329 (458)
...+.++.+..++|++.+.... .+|.++++.|.+-..+.+-. ......+..++++|....+ +--.+
T Consensus 235 ~~~~~l~~~~~~~l~~~~~~~~------~~t~~~~llaa~~~~l~~~~-------~~~dv~ig~~~~gR~~~~~~~~~~~ 301 (466)
T 2xhg_A 235 NMRIRLHPEETEQLLKHANQAY------QTEINDLLLAALGLAFAEWS-------KLAQIVIHLEGHGREDIIEQANVAR 301 (466)
T ss_dssp EEEEECCHHHHHHHHHTGGGTT------TCCHHHHHHHHHHHHHHHHH-------CCSEEEEEEEECCCCSCSTTCCCTT
T ss_pred EEEEEcCHHHHHHHHHHhHHhh------CCCHHHHHHHHHHHHHHHHh-------CCCceEEEecCCCCCccccCCCccc
Confidence 7788999999999998875422 37999999988655554432 3457899999999976421 12346
Q ss_pred ccccceeeeccccchhhhccCcHHHHHHHHHHHHhcCC
Q 012689 330 YVGNAVLSAYANAKCEELKEKPFSRLVEMVSEGAKRMS 367 (458)
Q Consensus 330 Y~GN~~~~~~~~~~~~~l~~~~l~~~A~~iR~ai~~~~ 367 (458)
-+|+++......+..+ .+.++.+++..|++.+..+.
T Consensus 302 ~vG~f~n~lplr~~~~--~~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 302 TVGWFTSQYPVLLDLK--QTAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp CCSCCCEEEEEEEECS--CCCSHHHHHHHHHHHHHHSG
T ss_pred cccceeeeccEEEecC--CCCCHHHHHHHHHHHHHhCc
Confidence 6677766554444332 13578899999999887763
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.21 E-value=3.5e-05 Score=88.53 Aligned_cols=267 Identities=12% Similarity=0.061 Sum_probs=150.8
Q ss_pred hhHHHHHHHHHhhcccccccCcEEEeeCCCC-cEEEEecCCceEEEEEeccCcccccCCCCCC--Ccccccccc---ccc
Q 012689 68 VVAEKLRNTLGKILVPYDFLAGRLKANAKTG-KMEIDCNAAGAVFIVASSEYKLDDIGDLVYP--NPGFKQLII---NSS 141 (458)
Q Consensus 68 ~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~G-~~~i~~~~~gv~f~~~~~~~s~~~l~~~~~p--~~~~~~l~p---~~~ 141 (458)
.+.+.|++++.+++...+.|--++...+ .| -.++......+.+.+. ++.....+ ...+..+.- ..+
T Consensus 47 ld~~~l~~A~~~lv~rH~~LRt~f~~~~-~~~p~Q~v~~~~~~~~~~~-------d~~~~~~~~~~~~~~~~~~~~~~~~ 118 (1304)
T 2vsq_A 47 LNIKCLEESMNVIMDRYDVFRTVFIHEK-VKRPVQVVLKKRQFHIEEI-------DLTHLTGSEQTAKINEYKEQDKIRG 118 (1304)
T ss_dssp CCHHHHHHHHHHHHHHCGGGGEEEECSS-CSSCEEEEESCCCCCEEEE-------ECTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhhhhceEEEEEcC-CCeEEEEECCCCCCceEEE-------ECCCCCchhHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999988642 33 3344443322333221 11110000 000111100 011
Q ss_pred CCCCCCCCCCCCeEEEEEeEEecCeEEEEecccccccchhhHHHHHHHHHHHhc----CCCCCCCCCC-CcccccCCCCC
Q 012689 142 FDDNLLEQDDKPLCIFQVTSFKCGGFSIGTSTNHATFDGLSFKVFLDNLAALAA----DKPLAIIPCN-DRRLLAARSPP 216 (458)
Q Consensus 142 ~~~~~~~~~~~P~l~vqvt~f~~gG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r----g~~~~~~P~~-dr~~l~~~~~p 216 (458)
| +....|++++.+.....+...|.+.+||.++||.|+..|++.+.+.++ |.+...+|.. =++...-....
T Consensus 119 f-----dl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~ 193 (1304)
T 2vsq_A 119 F-----DLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQ 193 (1304)
T ss_dssp C-----CTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTS
T ss_pred C-----CCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcc
Confidence 1 223458899988777777899999999999999999999999998875 3332222210 01111000000
Q ss_pred CCCCCccccccC--C-CCCCCCCCCCCCccCccCCceEEEEEeCHHHHHHHHHHhhhcccccCCcccchHHHHHHHHHHH
Q 012689 217 RVTFDHPEMLKL--K-MPFGEESNNAPIFDITQEDLDFKIFRLTPDDIANLKEKAKATVEYENSRYITGFNVVSALIWRC 293 (458)
Q Consensus 217 ~~~~~~~~~~~~--~-~p~~~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~S~~d~l~A~lW~~ 293 (458)
. .....+||.- . .|......................+.++++..++||+.|++.+ +|.+.+|.|.+-..
T Consensus 194 ~-~~~~~~yW~~~L~~~~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~~-------~T~~~vllaa~a~~ 265 (1304)
T 2vsq_A 194 D-KQASLRYWREYLEGFEGQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQH-------TTLSTALQAVWSVL 265 (1304)
T ss_dssp C-HHHHHHHHHHHHTTCCCCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHTT-------CCHHHHHHHHHHHH
T ss_pred h-hhHHHHHHHHHhCCCCccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHHcC-------CCHHHHHHHHHHHH
Confidence 0 0011234321 1 1100000000000011123456778899999999999998765 79999998875444
Q ss_pred HHhhcccccCCCCCceEEEEEEeeCCCCCCCCCCCCccccceeeeccccchhhhccCcHHHHHHHHHHHHhc
Q 012689 294 KALSYDHAKGKTPERESRMLYAVDIRPRLNPPLPASYVGNAVLSAYANAKCEELKEKPFSRLVEMVSEGAKR 365 (458)
Q Consensus 294 ~~~ar~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~l~~~A~~iR~ai~~ 365 (458)
+.|- .....+.+..+++.|..-.+.+ ++-+|+.+......+..+ .+.++.++...+++.+.+
T Consensus 266 L~r~-------tg~~dvv~G~pvsgR~~~~~~~-~~~vG~fvntlplr~~~~--~~~s~~~ll~~v~~~~~~ 327 (1304)
T 2vsq_A 266 ISRY-------QQSGDLAFGTVVSGRPAEIKGV-EHMVGLFINVVPRRVKLS--EGITFNGLLKRLQEQSLQ 327 (1304)
T ss_dssp HHHH-------HTCSEEEEEEEECCCCTTSTTG-GGCCSSCCEEEEEEEECC--TTCBHHHHHHHHHHHHHH
T ss_pred HHHh-------cCCCCEEEEEEeCCCCccchhh-hcccccceeEEEEEecCC--CCCcHHHHHHHHHHHHHH
Confidence 4332 2356789999999997532212 455666665554433332 135788888888887755
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=98.20 E-value=0.00016 Score=74.43 Aligned_cols=272 Identities=15% Similarity=0.105 Sum_probs=143.4
Q ss_pred hhhHHHHHHHHHhhcccccccCcEEEeeCCCCcEEEEecCC-c---------eEEEEEeccCccccc----------CCC
Q 012689 67 HVVAEKLRNTLGKILVPYDFLAGRLKANAKTGKMEIDCNAA-G---------AVFIVASSEYKLDDI----------GDL 126 (458)
Q Consensus 67 ~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~G~~~i~~~~~-g---------v~f~~~~~~~s~~~l----------~~~ 126 (458)
+...++||.|+-.+--++|-+|+++..+ ..+.....|... + --|.+...+.+-+|+ ...
T Consensus 72 ~~l~~~lr~AW~~lR~~hP~iA~~v~~d-~~~~~~~~Y~~~~~~~~~~~Wl~~Tf~v~~~~~t~~e~~~~~~~~r~~~~~ 150 (519)
T 3fot_A 72 QNLKEMFELALLDARFEHPECACTVSWD-DEVPAIITYESPESNESARDWARGCIHVQPTAKSALDLWSEMEEGRAAAND 150 (519)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGGCEEECC-SSSSCEEEEECCSSHHHHHHHHHHHEEEEECSCCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHhhCCcceeEEeeC-CCCcccEEEecCCCHHHHHHHHHhcEEEeCCCCCHHHHHHhhhhhhccccc
Confidence 3578888999888888999999999876 344444444211 1 134443333444443 111
Q ss_pred CCCCcccccccccccCCCCCCCCCCCCeEEEEEeEEecC--eEEEEecccccccchhhHHHHHHHHHHHhcCCC----CC
Q 012689 127 VYPNPGFKQLIINSSFDDNLLEQDDKPLCIFQVTSFKCG--GFSIGTSTNHATFDGLSFKVFLDNLAALAADKP----LA 200 (458)
Q Consensus 127 ~~p~~~~~~l~p~~~~~~~~~~~~~~P~l~vqvt~f~~g--G~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~----~~ 200 (458)
..|. ..-.++.-.. . ...+.| +. + -.-|.+.+||.++||.|...|++.+-+...... ..
T Consensus 151 ~~p~-~~~~l~~v~~---~--~~~~~~--------~p-~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~ 215 (519)
T 3fot_A 151 NTPS-KSIELFLLSD---V--STDSTP--------IP-QDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSR 215 (519)
T ss_dssp CCCC-CSCEEEEEES---S--SSTTSC--------CC-TTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGG
T ss_pred CCCc-cceEEEEEec---c--cccccc--------CC-CCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCcc
Confidence 1121 1111110000 0 000111 11 2 355667889999999999999999987665310 01
Q ss_pred CCCCCCc----ccccCCCCCCCC---CC----ccc-------cc-cCCCCCCCCCCCCCCccCccCCceEEEEEeCHHHH
Q 012689 201 IIPCNDR----RLLAARSPPRVT---FD----HPE-------ML-KLKMPFGEESNNAPIFDITQEDLDFKIFRLTPDDI 261 (458)
Q Consensus 201 ~~P~~dr----~~l~~~~~p~~~---~~----~~~-------~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~f~~~~~~l 261 (458)
..|.++- .-|. ||... .+ -++ +. .+... .... ..++...........+.|+++..
T Consensus 216 ~~~~~~~g~E~~~L~---P~~e~~~~~p~~~~~~e~~~~~~~~~~~~~~~--~~~~-~~P~~~~~~~~~~~~~~ls~~~t 289 (519)
T 3fot_A 216 EMKKIQWGQEIKNLS---PPVVDSLKLDINTLGSEFDDKCTEYTSALVAN--YKSR-GMKFQPGLALPRCVIHKLSADES 289 (519)
T ss_dssp GSCCCCTTTTGGGSC---CCTGGGBSSCGGGCCHHHHHHHHHHHHHHHHH--HHSC-CSBCCCCCCCEEEEEEECCHHHH
T ss_pred CCCcCCCCcccccCC---cCHHHHhCCCCCCCCHHHHHHHHHHHHHhhcC--CCcc-cCCCCCCCCCcceEEEEcCHHHH
Confidence 1222320 1111 11100 00 000 00 00000 0000 00111111233467889999999
Q ss_pred HHHHHHhhhcccccCCcccchHHHHHHHHHHHHHhhcccccCCCCCceEEEEEEeeCCCCCCCCCCCCccccceeeeccc
Q 012689 262 ANLKEKAKATVEYENSRYITGFNVVSALIWRCKALSYDHAKGKTPERESRMLYAVDIRPRLNPPLPASYVGNAVLSAYAN 341 (458)
Q Consensus 262 ~~Lk~~~~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~ 341 (458)
++|++.|++.. ++.+|.+.+|.|.+-.++.+.... ...+......+..+||+|+.+.++.-.+|+|.+.......
T Consensus 290 ~~L~~~ck~~~----~~g~Tvt~~l~Aa~~~al~~~~~~-~~~~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~~~~~~ 364 (519)
T 3fot_A 290 IDIVKAVKTRL----GPGFTISHLTQAAIVLALLDHLKP-NDLSDDEVFISPTSVDGRRWLREDIASNFYAMCQTAAVVR 364 (519)
T ss_dssp HHHHHHHHHHT----CTTCCHHHHHHHHHHHHHHHHC-----CCTTCCEEEEEEEECGGGBCHHHHTSCCSCCEEEEEEE
T ss_pred HHHHHHHHhcC----CCCeeHHHHHHHHHHHHHHhhcCC-cccCCCccEEEEeeeeccccCCCcccccccceeeeeeeeE
Confidence 99999999872 344899999988876666553210 0112344678999999999987655567888877655433
Q ss_pred cch----------hhhccCc-HHHHHHHHHHHHhc
Q 012689 342 AKC----------EELKEKP-FSRLVEMVSEGAKR 365 (458)
Q Consensus 342 ~~~----------~~l~~~~-l~~~A~~iR~ai~~ 365 (458)
++. +|+..+- +.++|..+++....
T Consensus 365 v~~i~~~~~~~~~~e~~~~~~~~~~ar~l~~~y~~ 399 (519)
T 3fot_A 365 IENLKSITVSHKDEKELQVRALESACRNIKKSYRQ 399 (519)
T ss_dssp ECCGGGGCCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCccccccccchhhhhhHhHHHHHHHHHHHHhhc
Confidence 211 1111111 56777777776655
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=68.89 E-value=3.3 Score=36.80 Aligned_cols=45 Identities=18% Similarity=0.321 Sum_probs=33.3
Q ss_pred CCCeEEEEEeEEecCe--EEEEecccccccchhhHHHHHHHHHHHhc
Q 012689 151 DKPLCIFQVTSFKCGG--FSIGTSTNHATFDGLSFKVFLDNLAALAA 195 (458)
Q Consensus 151 ~~P~l~vqvt~f~~gG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 195 (458)
..|++.+--..-.+|. +-|++++||.++||.-...|++.+.+.+.
T Consensus 163 ~~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 163 FAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp CSCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred cccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 3588764322112233 68899999999999999999999998764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=67.81 E-value=3.6 Score=36.69 Aligned_cols=44 Identities=18% Similarity=0.338 Sum_probs=31.4
Q ss_pred CCCeEEEEEeEEecCe--EEEEecccccccchhhHHHHHHHHHHHh
Q 012689 151 DKPLCIFQVTSFKCGG--FSIGTSTNHATFDGLSFKVFLDNLAALA 194 (458)
Q Consensus 151 ~~P~l~vqvt~f~~gG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~ 194 (458)
..|++.+=-..-.+|. +-|++++||.+.||.-...|++.+.+.+
T Consensus 171 ~~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 171 NYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SSCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 3577754211111233 6789999999999999999999998754
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=67.09 E-value=3.8 Score=36.60 Aligned_cols=44 Identities=16% Similarity=0.269 Sum_probs=32.6
Q ss_pred CCeEEEEEeEEecCe--EEEEecccccccchhhHHHHHHHHHHHhc
Q 012689 152 KPLCIFQVTSFKCGG--FSIGTSTNHATFDGLSFKVFLDNLAALAA 195 (458)
Q Consensus 152 ~P~l~vqvt~f~~gG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 195 (458)
.|++.+--..-.+|. +-|++++||.+.||.-...|++.+.+.+.
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 577765322112233 78899999999999999999999987653
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=64.42 E-value=4.8 Score=36.42 Aligned_cols=29 Identities=21% Similarity=0.276 Sum_probs=26.8
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhc
Q 012689 167 FSIGTSTNHATFDGLSFKVFLDNLAALAA 195 (458)
Q Consensus 167 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 195 (458)
+-|++++||.+.||.-...|++.+.+.+.
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999998764
No 17
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=63.44 E-value=4.1 Score=36.48 Aligned_cols=30 Identities=23% Similarity=0.373 Sum_probs=27.3
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcC
Q 012689 167 FSIGTSTNHATFDGLSFKVFLDNLAALAAD 196 (458)
Q Consensus 167 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 196 (458)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 558999999999999999999999998764
No 18
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=62.00 E-value=5.3 Score=35.99 Aligned_cols=30 Identities=27% Similarity=0.327 Sum_probs=27.1
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcC
Q 012689 167 FSIGTSTNHATFDGLSFKVFLDNLAALAAD 196 (458)
Q Consensus 167 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 196 (458)
+-|+++++|.+.||.-...|++.+.+.+..
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 669999999999999999999999987754
No 19
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=61.85 E-value=5.3 Score=36.24 Aligned_cols=30 Identities=23% Similarity=0.340 Sum_probs=27.0
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcC
Q 012689 167 FSIGTSTNHATFDGLSFKVFLDNLAALAAD 196 (458)
Q Consensus 167 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 196 (458)
+-|+++++|.+.||.-...|++.+.+.+..
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 237 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLAD 237 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence 679999999999999999999999987643
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=60.15 E-value=5.9 Score=36.39 Aligned_cols=29 Identities=17% Similarity=0.300 Sum_probs=26.5
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhc
Q 012689 167 FSIGTSTNHATFDGLSFKVFLDNLAALAA 195 (458)
Q Consensus 167 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 195 (458)
+-|+++++|.+.||.-...|++.+.+.+.
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 57899999999999999999999998764
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=55.27 E-value=8 Score=35.34 Aligned_cols=30 Identities=27% Similarity=0.370 Sum_probs=27.4
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcC
Q 012689 167 FSIGTSTNHATFDGLSFKVFLDNLAALAAD 196 (458)
Q Consensus 167 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 196 (458)
+-|+++++|.+.||.-...|++.+.+.+..
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999998864
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=53.91 E-value=8.8 Score=34.95 Aligned_cols=30 Identities=20% Similarity=0.352 Sum_probs=27.2
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcC
Q 012689 167 FSIGTSTNHATFDGLSFKVFLDNLAALAAD 196 (458)
Q Consensus 167 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 196 (458)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999988764
No 23
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=48.45 E-value=25 Score=27.49 Aligned_cols=46 Identities=20% Similarity=0.218 Sum_probs=36.5
Q ss_pred eEEEEecCCCCCCChhhHHHHHHHHHhhcccccccCcEEEeeCCCCcEEEEec
Q 012689 53 ETVHFFESHKDFPPHVVAEKLRNTLGKILVPYDFLAGRLKANAKTGKMEIDCN 105 (458)
Q Consensus 53 ~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~G~~~i~~~ 105 (458)
.+.+.|+.+ +.+.|+++|...+..-..+||.+...-+.+++.|..+
T Consensus 84 vm~i~f~gd-------dlea~ekalkemirqarkfagtvtytl~gn~l~i~it 129 (170)
T 4hhu_A 84 VMVIVFEGD-------DLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVIT 129 (170)
T ss_dssp EEEEEEECS-------CHHHHHHHHHHHHHHHHHTTCEEEEEECSSEEEEEEE
T ss_pred EEEEEEecC-------cHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEe
Confidence 355667643 6899999999999999999999988644567888875
No 24
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=46.83 E-value=15 Score=19.69 Aligned_cols=20 Identities=20% Similarity=0.366 Sum_probs=16.5
Q ss_pred CcccchHHHHHHHHHHHHHh
Q 012689 277 SRYITGFNVVSALIWRCKAL 296 (458)
Q Consensus 277 ~~~~S~~d~l~A~lW~~~~~ 296 (458)
.+-+++.|-|+-++|+.+..
T Consensus 5 psvftsqdylsdhlwralna 24 (26)
T 2xl1_A 5 PSVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred CceeecHHHHHHHHHHHHhc
Confidence 45578899999999998864
No 25
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=43.13 E-value=25 Score=27.52 Aligned_cols=45 Identities=20% Similarity=0.237 Sum_probs=35.7
Q ss_pred EEEEecCCCCCCChhhHHHHHHHHHhhcccccccCcEEEeeCCCCcEEEEec
Q 012689 54 TVHFFESHKDFPPHVVAEKLRNTLGKILVPYDFLAGRLKANAKTGKMEIDCN 105 (458)
Q Consensus 54 ~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~G~~~i~~~ 105 (458)
+.+.|+.+ +.+.|+++|...+..-..+||.+...-+.+++.|..+
T Consensus 4 m~i~f~gd-------dlea~ekalkemirqarkfagtvtytl~gn~l~i~it 48 (170)
T 4hhu_A 4 MVIVFEGD-------DLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVIT 48 (170)
T ss_dssp EEEEEECS-------CHHHHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEE
T ss_pred EEEEEecC-------cHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEe
Confidence 35567643 5899999999999999999999988644567888775
No 26
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=40.86 E-value=72 Score=20.65 Aligned_cols=24 Identities=13% Similarity=0.144 Sum_probs=20.4
Q ss_pred eEEEEEeCHHHHHHHHHHhhhccc
Q 012689 250 DFKIFRLTPDDIANLKEKAKATVE 273 (458)
Q Consensus 250 ~~~~f~~~~~~l~~Lk~~~~~~~~ 273 (458)
....|+||+++-+.|++.|.++.+
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE~e 25 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEEEE 25 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTTS
T ss_pred ceEEEEecHHHHHHHHHHHHHHHH
Confidence 357899999999999999987653
No 27
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=38.12 E-value=69 Score=22.04 Aligned_cols=37 Identities=16% Similarity=0.217 Sum_probs=31.1
Q ss_pred hHHHHHHHHHhhcccccccCcEEEeeCCCCcEEEEec
Q 012689 69 VAEKLRNTLGKILVPYDFLAGRLKANAKTGKMEIDCN 105 (458)
Q Consensus 69 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~~G~~~i~~~ 105 (458)
+.+.++++|...+..-..+||.+...-..+.++|+.+
T Consensus 11 dleafekalkemirqarkfagtvtytldgndleirit 47 (85)
T 2kl8_A 11 DLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRIT 47 (85)
T ss_dssp SHHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEEe
Confidence 5889999999999999999999988644456888875
No 28
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=35.04 E-value=8.1 Score=38.24 Aligned_cols=30 Identities=23% Similarity=0.419 Sum_probs=0.0
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcC
Q 012689 167 FSIGTSTNHATFDGLSFKVFLDNLAALAAD 196 (458)
Q Consensus 167 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 196 (458)
+-|++++||.+.||.-...|++.+.+.+..
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp ------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999887653
No 29
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=30.66 E-value=1.4e+02 Score=21.00 Aligned_cols=45 Identities=13% Similarity=-0.021 Sum_probs=38.0
Q ss_pred CCceEEEEEeCHHHHHHHHHHhhhcccccCCcccchHHHHHHHHHHHHHhhc
Q 012689 247 EDLDFKIFRLTPDDIANLKEKAKATVEYENSRYITGFNVVSALIWRCKALSY 298 (458)
Q Consensus 247 ~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar 298 (458)
.......+++|.+.-++|+..|..++ .|.|.-+.+.|-+.+.+-.
T Consensus 17 r~~~kf~LRlP~eL~~~L~~~A~~~g-------rSlNaeIv~~Le~sl~~e~ 61 (69)
T 3qoq_A 17 RTADKFVVRLPEGMREQIAEVARSHH-------RSMNSEIIARLEQSLLQEG 61 (69)
T ss_dssp TTSEEEEEECCTTHHHHHHHHHHHTT-------CCHHHHHHHHHHHHHHHHT
T ss_pred ccCCceEEECCHHHHHHHHHHHHHhC-------CCHHHHHHHHHHHHHHHcC
Confidence 34567799999999999999998877 7999999999988887654
No 30
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=26.23 E-value=1.5e+02 Score=19.89 Aligned_cols=26 Identities=19% Similarity=0.134 Sum_probs=22.0
Q ss_pred CCceEEEEEeCHHHHHHHHHHhhhcc
Q 012689 247 EDLDFKIFRLTPDDIANLKEKAKATV 272 (458)
Q Consensus 247 ~~~~~~~f~~~~~~l~~Lk~~~~~~~ 272 (458)
.+.-...|+||.++-+.|.+.|.++.
T Consensus 13 k~~~~Vs~Y~SkEey~~L~klA~eE~ 38 (66)
T 2k1o_A 13 KRNFSVTFYLSKEEHDVLRRLADEEV 38 (66)
T ss_dssp CCCEEEEEEEEHHHHHHHHHHHHTTC
T ss_pred ccceEEEEEecHHHHHHHHHHHHHHH
Confidence 34557899999999999999998765
No 31
>1p94_A Plasmid partition protein PArg; ribbon-helix-helix, dimer, DNA binding, cell cycle; NMR {Salmonella enterica} SCOP: a.43.1.3
Probab=25.25 E-value=1.2e+02 Score=21.78 Aligned_cols=41 Identities=10% Similarity=0.028 Sum_probs=34.1
Q ss_pred CCceEEEEEeCHHHHHHHHHHhhhcccccCCcccchHHHHHHHHHHHH
Q 012689 247 EDLDFKIFRLTPDDIANLKEKAKATVEYENSRYITGFNVVSALIWRCK 294 (458)
Q Consensus 247 ~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~S~~d~l~A~lW~~~ 294 (458)
.......|.|+.+.-.+||..|...+ +|..|+|..++=..+
T Consensus 32 ~~~~Rlti~i~~~lh~rlK~~Aa~~g-------~Smsdvvreli~~~L 72 (76)
T 1p94_A 32 GKIKRVNVNFDEEKHTRFKAACARKG-------TSITDVVNQLVDNWL 72 (76)
T ss_dssp TCEEECCEEEEHHHHHHHHHHHHHHT-------CCHHHHHHHHHHHHH
T ss_pred cCceeEEEEcCHHHHHHHHHHHHHcC-------CCHHHHHHHHHHHHH
Confidence 45667799999999999999998776 799999988874444
No 32
>2an7_A Protein PARD; bacterial antidote, ribbon-helix-helix, DNA-binding motif, plasmid addiction, DNA binding protein; NMR {Escherichia coli}
Probab=22.87 E-value=1.4e+02 Score=21.64 Aligned_cols=34 Identities=15% Similarity=-0.060 Sum_probs=27.9
Q ss_pred eEEEEEeCHHHHHHHHHHhhhcccccCCcccchHHHHHHHH
Q 012689 250 DFKIFRLTPDDIANLKEKAKATVEYENSRYITGFNVVSALI 290 (458)
Q Consensus 250 ~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~S~~d~l~A~l 290 (458)
....|.+|.+.=++||..|...+ +|.++.+.-++
T Consensus 2 SrLTIrLpd~qH~rLKalAa~qG-------~SInqli~E~l 35 (83)
T 2an7_A 2 SRLTIDMTDQQHQSLKALAALQG-------KTIKQYALERL 35 (83)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHT-------SCHHHHHHHHT
T ss_pred ceeeEeCCHHHHHHHHHHHHHcC-------CcHHHHHHHHc
Confidence 56789999999999999998777 67777776653
No 33
>1baz_A ARC repressor; transcription regulation; 1.90A {Enterobacteria phage P22} SCOP: a.43.1.1 PDB: 1bdv_A* 1arq_A 1arr_A 1bdt_A* 1par_A* 1myk_A 1qtg_A 1b28_A 1myl_A
Probab=20.21 E-value=1.9e+02 Score=18.89 Aligned_cols=43 Identities=5% Similarity=-0.057 Sum_probs=35.2
Q ss_pred CceEEEEEeCHHHHHHHHHHhhhcccccCCcccchHHHHHHHHHHHHHhh
Q 012689 248 DLDFKIFRLTPDDIANLKEKAKATVEYENSRYITGFNVVSALIWRCKALS 297 (458)
Q Consensus 248 ~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~~S~~d~l~A~lW~~~~~a 297 (458)
+.....++++.+--++|+..|..++ .|.|.-+...|-.++-+.
T Consensus 6 ~~~~~~lRlp~eL~~~l~~~A~~~g-------rS~N~~i~~~L~~~l~~~ 48 (53)
T 1baz_A 6 KMPQVNLRWPREVLDLVRKVAEENG-------RSVNSEIYQRVMESFKKE 48 (53)
T ss_dssp CSCEEEEECCHHHHHHHHHHHHHTT-------CCHHHHHHHHHHHHHHHT
T ss_pred cCCeeEEECCHHHHHHHHHHHHHcC-------CCHHHHHHHHHHHHHhhc
Confidence 3456788999999999999998877 699999988887776543
Done!