Query 012693
Match_columns 458
No_of_seqs 132 out of 1370
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 14:24:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012693.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012693hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtk_A 60 kDa chaperonin 2; he 100.0 9E-104 3E-108 836.1 38.4 448 5-457 52-505 (546)
2 1kp8_A Groel protein; chaperon 100.0 4E-102 1E-106 825.5 42.3 446 5-457 52-507 (547)
3 1we3_A CPN60(groel); chaperoni 100.0 4E-101 2E-105 818.2 44.9 446 5-457 52-509 (543)
4 1iok_A Chaperonin 60; chaperon 100.0 5E-102 2E-106 825.3 35.9 447 5-457 53-509 (545)
5 3p9d_C T-complex protein 1 sub 100.0 9.2E-87 3.1E-91 712.5 29.2 422 5-457 61-570 (590)
6 3iyg_H T-complex protein 1 sub 100.0 1.9E-84 6.5E-89 688.0 39.3 395 5-457 53-498 (515)
7 3ko1_A Chaperonin; 9-fold symm 100.0 1.2E-84 4E-89 694.0 37.3 392 5-457 72-517 (553)
8 3ruv_A Chaperonin, CPN; double 100.0 1.4E-84 4.7E-89 693.1 37.5 392 5-457 61-503 (543)
9 3iyg_B T-complex protein 1 sub 100.0 4.4E-84 1.5E-88 685.4 39.4 391 5-457 54-495 (513)
10 3aq1_B Thermosome subunit; gro 100.0 2.4E-84 8.2E-89 685.4 35.8 392 5-457 15-460 (500)
11 3p9d_A T-complex protein 1 sub 100.0 1.3E-84 4.5E-89 694.9 31.6 397 5-457 66-532 (559)
12 1q3q_A Thermosome alpha subuni 100.0 1E-83 3.6E-88 687.0 36.8 392 5-457 65-509 (548)
13 1a6d_A Thermosome (alpha subun 100.0 1.1E-83 3.6E-88 686.6 36.3 391 5-457 64-506 (545)
14 3iyg_A T-complex protein 1 sub 100.0 2.1E-83 7.3E-88 682.5 38.0 397 5-457 52-512 (529)
15 3iyg_E T-complex protein 1 sub 100.0 5.8E-83 2E-87 677.5 40.1 399 5-457 52-499 (515)
16 1a6d_B Thermosome (beta subuni 100.0 1.6E-83 5.6E-88 685.3 36.0 392 5-457 63-507 (543)
17 3p9d_D T-complex protein 1 sub 100.0 3.8E-84 1.3E-88 687.6 30.7 396 5-457 61-512 (528)
18 3iyg_D T-complex protein 1 sub 100.0 8E-83 2.7E-87 676.5 37.3 392 5-457 53-502 (518)
19 3iyg_Q T-complex protein 1 sub 100.0 2.8E-82 9.5E-87 671.9 38.5 398 5-457 53-496 (512)
20 3iyg_G T-complex protein 1 sub 100.0 7.3E-82 2.5E-86 668.7 39.3 392 5-457 51-498 (515)
21 3p9d_E T-complex protein 1 sub 100.0 2.1E-82 7.2E-87 678.3 33.0 398 5-457 87-542 (562)
22 3p9d_G T-complex protein 1 sub 100.0 3E-83 1E-87 683.3 24.8 394 5-457 66-511 (550)
23 3iyg_Z T-complex protein 1 sub 100.0 1.5E-81 5.2E-86 666.1 35.9 391 5-457 52-501 (517)
24 3p9d_B T-complex protein 1 sub 100.0 6.4E-83 2.2E-87 678.9 23.5 391 5-457 60-502 (527)
25 3p9d_F T-complex protein 1 sub 100.0 6.6E-81 2.2E-85 665.6 26.9 392 5-457 59-521 (546)
26 3p9d_H T-complex protein 1 sub 100.0 3E-80 1E-84 662.4 23.1 392 5-457 68-532 (568)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 1.2E-48 4.3E-53 353.4 14.3 189 140-328 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 5.2E-47 1.8E-51 343.4 15.9 184 144-327 13-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 1E-37 3.4E-42 269.8 14.5 144 145-288 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 1.1E-21 3.8E-26 179.7 13.1 144 139-336 3-174 (178)
31 1ass_A Thermosome; chaperonin, 99.8 5.5E-18 1.9E-22 152.2 13.2 127 143-292 1-154 (159)
32 2lnd_A De novo designed protei 32.7 92 0.0032 23.7 5.6 36 181-216 35-70 (112)
33 2cos_A Serine/threonine protei 22.8 85 0.0029 22.1 3.5 34 57-90 13-51 (54)
No 1
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=9.4e-104 Score=836.13 Aligned_cols=448 Identities=32% Similarity=0.480 Sum_probs=416.3
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||++++. +.+++++|++||+++||||||+||||++||++++++++ |+||+.|++||++|.+.++++
T Consensus 52 G~TIlk~i~v~hp~~n~g--Akll~e~a~~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~ 129 (546)
T 3rtk_A 52 GVSIAKEIELEDPYEKIG--AELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTET 129 (546)
T ss_dssp ---------CCCHHHHHH--HHHHHHHHTSCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCChhhhHH--HHHHHHHHHhhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 358999999999994433 34558999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCcceeEecCCCccceeEEEeeEEEeccccCCcccccccc
Q 012693 84 LDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFTHKNK 163 (458)
Q Consensus 84 L~~~s~~v~~~~~l~~va~ts~~~~~~l~~li~~A~~~v~~~~~I~i~~g~~~~d~~~lv~G~~~~~g~~~~~~~~~~~~ 163 (458)
|+++++|+++.++|.++|++|++ ++.+++++++|+.+++.+|.|+|+.+++..+++++++||+|+++|.||||++++++
T Consensus 130 L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~ 208 (546)
T 3rtk_A 130 LLKGAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPER 208 (546)
T ss_dssp HHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTT
T ss_pred HHHhcccCCChHHHHhHeEEeCC-chHHHHHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCccc
Confidence 99999999988999999999999 88999999999999999999999988887788999999999999999999999999
Q ss_pred ceeeecCceEEEeccccCCHHHHHHHHhHHHhcCCcEEEEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHH
Q 012693 164 KECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIME 243 (458)
Q Consensus 164 ~~~~~~~~~Il~~d~~i~~~~~i~~~l~~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le 243 (458)
|+.+++||+|+++|++|+++++++|+++++.++|+||||++++|+++||++|+.|+++|++++++||+|+|++.|+++|+
T Consensus 209 m~~~len~kIll~d~kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le 288 (546)
T 3rtk_A 209 QEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQ 288 (546)
T ss_dssp TBEEEESCEEEEBSSEECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHH
T ss_pred CeeEecccEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhcch----HHHHHHHh
Q 012693 244 DLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLA 319 (458)
Q Consensus 244 ~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s----~~l~eRl~ 319 (458)
|||++|||++++++.+++++++++++||+|++|++++++++||+||++++++..|+++|++++++++| |+|+||++
T Consensus 289 ~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erla 368 (546)
T 3rtk_A 289 DMAILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLA 368 (546)
T ss_dssp HHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHH
T ss_pred HHHHHhCCEEeeccccCccccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHH
Confidence 99999999999998888999999999999999999999999999999999999999999999999888 99999999
Q ss_pred hhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHHHHhcCCcCChhHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHH
Q 012693 320 KLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMA 399 (458)
Q Consensus 320 ~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~e~~~i~~~a~AL~~i 399 (458)
||+|++|||+|||+|+++++|+||++|||||++|+++++|+|||||++|+++|++|++|+ .++++|+|+++|++||+.|
T Consensus 369 kl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~giVpGGGa~e~~~s~~L~~~~-~~g~eq~~i~~~a~ALe~i 447 (546)
T 3rtk_A 369 KLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAAPTLDELK-LEGDEATGANIVKVALEAP 447 (546)
T ss_dssp HHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHTTGGGSTTSC-CCTTHHHHHHHHHHHTTHH
T ss_pred HhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999988 7899999999999999999
Q ss_pred HHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCCccccccHHHHHHhhh
Q 012693 400 AYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 400 p~~La~NaG~d~~~v-~~l~~~~~~~~G~d~~~~~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
|++||+|||+|+.++ .+|++. ..++|||+.+|++.||++.|||||+.||+++|++|+
T Consensus 448 p~~La~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~ 505 (546)
T 3rtk_A 448 LKQIAFNSGLEPGVVAEKVRNL-PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAA 505 (546)
T ss_dssp HHHHHTTTTCCHHHHHHHHHHS-CTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHhh-cCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHH
Confidence 999999999999999 999885 345999999999999999999999999999999986
No 2
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=3.9e-102 Score=825.51 Aligned_cols=446 Identities=34% Similarity=0.508 Sum_probs=432.3
Q ss_pred HHHHhhhccccCc----cccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (458)
Q Consensus 5 ~~~il~~~~~~~p----~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~ 79 (458)
..+|||+|++.|| .||++ +++|++||+++||||||+|+||++||+++.++++ |+||+.|++||++|.+.
T Consensus 52 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~ 125 (547)
T 1kp8_A 52 GVSVAREIELEDKFENMGAQMV------KEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTV 125 (547)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccccChhhhHHHHHH------HHHHHhhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 3689999999999 77755 8999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCcceeEecCCCccceeEEEeeEEEeccccCCcccc
Q 012693 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (458)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~li~~A~~~v~~~~~I~i~~g~~~~d~~~lv~G~~~~~g~~~~~~~~ 159 (458)
++++|+++++|+++.++|.++|++|+++++++++++++|+.++++++.|+|++|++++|++++++||+|++||.||||++
T Consensus 126 a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt 205 (547)
T 1kp8_A 126 AVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFIN 205 (547)
T ss_dssp HHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCS
T ss_pred HHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCcccccccc
Confidence 99999999999998899999999999989999999999999999999999999999988779999999999999999999
Q ss_pred ccccceeeecCceEEEeccccCCHHHHHHHHhHHHhcCCcEEEEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchh
Q 012693 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (458)
Q Consensus 160 ~~~~~~~~~~~~~Il~~d~~i~~~~~i~~~l~~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~ 239 (458)
++++|+.+++||+|+++|++|+++++++|+++++.++|+||||++++|+++|+++|+.|++++.++|++||+|+|+++|+
T Consensus 206 ~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk 285 (547)
T 1kp8_A 206 KPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRK 285 (547)
T ss_dssp BTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHH
T ss_pred CcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhcch----HHHH
Q 012693 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (458)
Q Consensus 240 ~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s----~~l~ 315 (458)
++|+|||++|||++++++.+++++++++++||+|++|++++++++||+||+++++++.|+++|+++++.++| |+|+
T Consensus 286 ~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~ 365 (547)
T 1kp8_A 286 AMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQ 365 (547)
T ss_dssp HHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHH
T ss_pred HHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHH
Confidence 999999999999999998888899999999999999999999999999999999999999999999999888 9999
Q ss_pred HHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHHHHhcCCcCChhHHHHHHHHHHHhhcCCChhHHHHHHHHHHH
Q 012693 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNA 395 (458)
Q Consensus 316 eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~e~~~i~~~a~A 395 (458)
||++||+|++|||+|||+|+++++|+||++|||||++|+++++|+|||||++|++++++|++++..++++|+++++|++|
T Consensus 366 erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~A 445 (547)
T 1kp8_A 366 ERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNADQNVGIKVALRA 445 (547)
T ss_dssp HHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHTTTCCCSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCCEEeCCcHHHHHHHHHHHHHhccCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999876688999999999999
Q ss_pred HHHHHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCCccccccHHHHHHhhh
Q 012693 396 LKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 396 L~~ip~~La~NaG~d~~~v-~~l~~~~~~~~G~d~~~~~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
|+.||++||+|||+|+.++ .+|++. +.++|||+.+|++.||++.|||||+.||+++|++|+
T Consensus 446 Le~ip~~la~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~ 507 (547)
T 1kp8_A 446 MEAPLRQIVLNCGEEPSVVANTVKGG-DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAA 507 (547)
T ss_dssp TTHHHHHHHHHHTSCHHHHHHHHHHS-CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhc-CCCEeEeCCCCccccchhcCceechHhHHHHHHHHH
Confidence 9999999999999999999 999875 468999999999999999999999999999999986
No 3
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=4.5e-101 Score=818.17 Aligned_cols=446 Identities=35% Similarity=0.533 Sum_probs=431.9
Q ss_pred HHHHhhhccccCc----cccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (458)
Q Consensus 5 ~~~il~~~~~~~p----~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~ 79 (458)
..+|||+|++.|| +||++ +++|++||+++||||||+|+||++||+++.++++ |+||+.|++||++|.+.
T Consensus 52 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~ 125 (543)
T 1we3_A 52 GVTVAKEVELEDHLENIGAQLL------KEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEA 125 (543)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCChHHhHHHHHH------HHHHHhhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 3689999999999 77765 7999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCcceeEecCCCccceeEEEeeEEEeccccCCcccc
Q 012693 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (458)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~li~~A~~~v~~~~~I~i~~g~~~~d~~~lv~G~~~~~g~~~~~~~~ 159 (458)
++++|+++++|+++.++|.++|++|++ ++.+++++++|+.++++++.|+|++|++++|++++++||+|++||.||||++
T Consensus 126 a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt 204 (543)
T 1we3_A 126 AVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVT 204 (543)
T ss_dssp HHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCS
T ss_pred HHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCcccccccc
Confidence 999999999999988999999999999 8999999999999999999999999999988779999999999999999999
Q ss_pred ccccceeeecCceEEEeccccCCHHHHHHHHhHHHhcCCcEEEEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchh
Q 012693 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (458)
Q Consensus 160 ~~~~~~~~~~~~~Il~~d~~i~~~~~i~~~l~~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~ 239 (458)
++++|..+++||+|+++|++|+++++++|+++++.++|+||||++++|+++|+++|+.|++++.+++++||+|+|+++|+
T Consensus 205 ~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~ 284 (543)
T 1we3_A 205 NPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRK 284 (543)
T ss_dssp BTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHH
T ss_pred CcccCceeecCceEEEECCCcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhcch----HHHH
Q 012693 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (458)
Q Consensus 240 ~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s----~~l~ 315 (458)
++|+|||++|||++++++.+++++++++++||+|+.|++++++++||+||+++++++.|+++|+.+++.++| ++|+
T Consensus 285 ~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~ 364 (543)
T 1we3_A 285 EMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQ 364 (543)
T ss_dssp HHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHH
T ss_pred HHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHH
Confidence 999999999999999998888999999999999999999999999999999999999999999999999888 9999
Q ss_pred HHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHHHHhcCCcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHH
Q 012693 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQN 394 (458)
Q Consensus 316 eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a~~~gvVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~ 394 (458)
||++||+|++|||+|||+|+++++|+||++|||||++|+++++|+|||||++|++++++|++++.. ++++|+++++|++
T Consensus 365 erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ 444 (543)
T 1we3_A 365 ERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRR 444 (543)
T ss_dssp HHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999875 8999999999999
Q ss_pred HHHHHHHHHHHhcCCChHHH-HHHHhc-CCCCeeEeCCCCccccccccCCccccccHHHHHHhhh
Q 012693 395 ALKMAAYLIASNAGVDGSVI-DKLLEQ-DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 395 AL~~ip~~La~NaG~d~~~v-~~l~~~-~~~~~G~d~~~~~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+
T Consensus 445 ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 509 (543)
T 1we3_A 445 ALEEPARQIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAA 509 (543)
T ss_dssp HTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHH
Confidence 99999999999999999999 999873 4578999999999999999999999999999999986
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=4.6e-102 Score=825.35 Aligned_cols=447 Identities=36% Similarity=0.544 Sum_probs=390.8
Q ss_pred HHHHhhhccccCc----cccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (458)
Q Consensus 5 ~~~il~~~~~~~p----~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~ 79 (458)
..+|||+|++.|| +||++ +++|++||+++||||||+|+||++||+++.++++ |+||+.|++||++|.+.
T Consensus 53 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~ 126 (545)
T 1iok_A 53 GVSVAKEIELSDKFENMGAQMV------REVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAK 126 (545)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCChhhHHHHHHH------HHHHHhhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 3689999999999 77766 7999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCcceeEecCCCccceeEEEeeEEEeccccCCcccc
Q 012693 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (458)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~li~~A~~~v~~~~~I~i~~g~~~~d~~~lv~G~~~~~g~~~~~~~~ 159 (458)
++++|+++++|+++.++|.++|++|+++++.+++++++|+.++++++.|+|++|++++|++++++||+|++||.||||++
T Consensus 127 a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt 206 (545)
T 1iok_A 127 VVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVT 206 (545)
T ss_dssp HHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCC
T ss_pred HHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCcccccccc
Confidence 99999999999988889999999999989999999999999999999999999999988779999999999999999999
Q ss_pred ccccceeeecCceEEEeccccCCHHHHHHHHhHHHhcCCcEEEEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchh
Q 012693 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (458)
Q Consensus 160 ~~~~~~~~~~~~~Il~~d~~i~~~~~i~~~l~~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~ 239 (458)
+|++|+.+++||+|+++|++|+++++++|+++++.++|+||||++++|+++|+++|+.|++++.++|++||+|+|+++|+
T Consensus 207 ~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~ 286 (545)
T 1iok_A 207 NADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRK 286 (545)
T ss_dssp CSSSSCEEEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC-----------------CEEEECSCCTTHHH
T ss_pred CcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhcch----HHHH
Q 012693 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (458)
Q Consensus 240 ~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s----~~l~ 315 (458)
++|+|||++|||++++++.+++++++++++||+|++|++++++|+||+||+++++++.|+++|+++++.++| |+|+
T Consensus 287 ~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~ 366 (545)
T 1iok_A 287 AMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQ 366 (545)
T ss_dssp HHHHHHHHHHTC---------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHH
T ss_pred HHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHH
Confidence 999999999999999998888999999999999999999999999999999999999999999999999888 9999
Q ss_pred HHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHHHHhcCCcCChhHHHHHHHHHHHhhcCCChhHHHHHHHHHHH
Q 012693 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNA 395 (458)
Q Consensus 316 eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~e~~~i~~~a~A 395 (458)
||++||+|++|||+|||+|+++++|+||++|||||++|+++++|+|||||++|++++++|++++..++++|+++++|++|
T Consensus 367 erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~A 446 (545)
T 1iok_A 367 ERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRA 446 (545)
T ss_dssp HHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHGGGGGSCCCSSHHHHHHHHHHHHH
T ss_pred HHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHhccCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999876688999999999999
Q ss_pred HHHHHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCCccccccHHHHHHhhh
Q 012693 396 LKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 396 L~~ip~~La~NaG~d~~~v-~~l~~~~~~~~G~d~~~~~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
|+.||++||+|||+|+.++ .+|++..+.++|||+.+|++.||++.|||||+.||+++|++|+
T Consensus 447 Le~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 509 (545)
T 1iok_A 447 LEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAA 509 (545)
T ss_dssp TTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHH
Confidence 9999999999999999999 9998754578999999999999999999999999999999986
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=9.2e-87 Score=712.52 Aligned_cols=422 Identities=13% Similarity=0.144 Sum_probs=350.2
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhh-cc-CCChHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKA-LG-RANLTGLTQGFRMAADAVVR 82 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~l-i~-gi~P~~I~~G~~~a~~~~~~ 82 (458)
..+|||+|++.||+||++ +++|++||+++||||||+|+||++||+++.++ ++ |+||+.|++||++|.+.+++
T Consensus 61 G~TIlk~i~~~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~ 134 (590)
T 3p9d_C 61 GHAILREIDVAHPAAKSM------LELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALE 134 (590)
T ss_dssp HHHHHHHSCCCCHHHHTH------HHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCHHHHHH------HHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 79999999999999999999999999999999 99 99999999999999999999
Q ss_pred HHhccccccCC--HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccCcc----------------eeEe--cCCCc
Q 012693 83 NLDCQARKITT--FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWENDL----------------ITIF--DRKAL 136 (458)
Q Consensus 83 ~L~~~s~~v~~--~~~l~~va~ts~~------~~~~l~~li~~A~~~v~~~~~----------------I~i~--~g~~~ 136 (458)
+|+++++|++. .+.|.++|+||++ +++.|++++++|+.++++++. |+|+ .|++.
T Consensus 135 ~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~ 214 (590)
T 3p9d_C 135 VIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDV 214 (590)
T ss_dssp HHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCG
T ss_pred HHHHHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCc
Confidence 99999999873 6789999988764 367899999999999987642 4454 47777
Q ss_pred cceeEEEeeEEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHHHHHH-----------hH
Q 012693 137 YNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVIRQAS-----------LP 192 (458)
Q Consensus 137 ~d~~~lv~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~-------------i~~~~~i~~~l-----------~~ 192 (458)
. ++++++||+|++++.+|.| +.+++||+|+++|++ |++++++.+++ ++
T Consensus 215 ~-ds~lv~Gmvfdk~~~~~~m-------~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vek 286 (590)
T 3p9d_C 215 L-DSRVLKGVLLNKDVVHPKM-------SRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQ 286 (590)
T ss_dssp G-GCBCCSSEEECCCCSCTTS-------CSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred c-cceeeeEEEEecccCCCCC-------cceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5 5899999999999888754 347999999999984 45666766655 67
Q ss_pred HHhcCCcEEEEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCcee
Q 012693 193 CMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS 272 (458)
Q Consensus 193 i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~ 272 (458)
+.+.|.++||+.++|+++|+++|..++ |+++ ++.++.+|+|||++|||+++++ ++++++++||+
T Consensus 287 I~~~g~~vII~e~~I~d~Al~~L~k~~------I~av-----~~~~k~~le~ia~~TGa~iis~-----l~~~~~~~LG~ 350 (590)
T 3p9d_C 287 ILAVRPTLVITEKGVSDLAQHYLLKGG------CSVL-----RRVKKSDNNRIARVTGATIVNR-----VEDLKESDVGT 350 (590)
T ss_dssp HHTTCCSEECCSSCCCTHHHHHHHHTT------CCCC-----CCCCHHHHHHHHHHHTCCCCSC-----STTCCTTSCBC
T ss_pred HHhcCCcEEEecCCcCHHHHHHHHhcc------ceee-----ccCCHHHHHHHHHHhCCceeec-----ccCCCHHHhCC
Confidence 888886665666679999999999764 4454 5678899999999999999996 89999999999
Q ss_pred -eeEEE---EecceEEEEcCCCChhh--------------------------HHHHHHHHHHHhhhcchHHHHHHHhhhc
Q 012693 273 -CKRVI---ATMDNVVIIGGSGELVD--------------------------IQERCEQLRSTIKLSTSDKLKDRLAKLS 322 (458)
Q Consensus 273 -~~~v~---i~~~~~~~~~~~~~~~~--------------------------i~~r~~~l~~~i~~~~s~~l~eRl~~l~ 322 (458)
|+.|+ +++++|+||+||+++++ ++.|+++|+++++.++|+ +.+++++|+
T Consensus 351 ~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~-~~~~~~~l~ 429 (590)
T 3p9d_C 351 NCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGH-HHHHHHHGS 429 (590)
T ss_dssp CCSEEECCEETTEECEEECC----------------------------------------------------------CC
T ss_pred cCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCH-HHHHHHhhc
Confidence 99996 68899999999999888 999999999999888773 336689999
Q ss_pred CCcEEEEEccCchhHHHHHHHHHHHHHHHHHHHHhc-CCcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHH
Q 012693 323 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAA 400 (458)
Q Consensus 323 g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a~~~-gvVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip 400 (458)
||+|||+|||+|+++++|+||++|||||++|+++++ |+|||||++|+++|++|++|+.. ++++|+|+++|++||+.||
T Consensus 430 ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip 509 (590)
T 3p9d_C 430 GKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIP 509 (590)
T ss_dssp CSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHH
T ss_pred CCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 59999999999999999998764 8999999999999999999
Q ss_pred HHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCCccccccHHHHHHhhh
Q 012693 401 YLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 401 ~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
++||+|||+|+.++ .+|++. +++++|||+.+|++.||++.|||||+.||+++|++|+
T Consensus 510 ~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 570 (590)
T 3p9d_C 510 RTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAI 570 (590)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHH
Confidence 99999999999999 999873 5678999999999999999999999999999999986
No 6
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.9e-84 Score=688.02 Aligned_cols=395 Identities=14% Similarity=0.150 Sum_probs=357.5
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+|+||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 53 G~tIlk~i~v~hP~Akll------~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 126 (515)
T 3iyg_H 53 GATILKLLDVVHPAAKTL------VDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNK 126 (515)
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHhhceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--C----HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---cceeEe--cCCCccceeEEEeeE
Q 012693 84 LDCQARKIT--T----FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITIF--DRKALYNELNFVKGM 146 (458)
Q Consensus 84 L~~~s~~v~--~----~~~l~~va~ts~~------~~~~l~~li~~A~~~v~~~---~~I~i~--~g~~~~d~~~lv~G~ 146 (458)
|+++++|++ + .+.|.++|+||++ +++.|++++++|+.+++.+ +.|+|+ .|++.. ++++++||
T Consensus 127 L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~-ds~lv~G~ 205 (515)
T 3iyg_H 127 IKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALE-ESQLVAGV 205 (515)
T ss_pred HHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCcc-ceEEEeee
Confidence 999999984 5 4667999998774 4678999999999999876 678887 465654 68999999
Q ss_pred EEeccccCCccccccccceeeecCceEEEecc-------------ccCCHHHH-----------HHHHhHHHhcCCcEEE
Q 012693 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNVI-----------RQASLPCMMQGQSLLV 202 (458)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~-------------~i~~~~~i-----------~~~l~~i~~~~~~lvi 202 (458)
+|+++|.||||.++|+ +++||+|+++|+ +|++++++ .++++++.+.|+|+||
T Consensus 206 ~~dk~~~~p~~~~~p~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi 281 (515)
T 3iyg_H 206 AFKKTFSYAGFEMQPK----KYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVL 281 (515)
T ss_pred EEecCccCcccccCCc----cccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9999999999977665 789999999998 46777775 5668999999999999
Q ss_pred EecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEe---
Q 012693 203 VAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT--- 279 (458)
Q Consensus 203 i~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i~--- 279 (458)
++++|++.++++|.. .++++++ ++++.+|+|||++|||+++++ ++++++++||+|+.|++.
T Consensus 282 ~~~~I~dla~~~l~~------~gI~~v~-----~~~k~~leria~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ig 345 (515)
T 3iyg_H 282 SKLPIGDVATQYFAD------RDMFCAG-----RVPEEDLKRTMMACGGSIQTS-----VNALSSDVLGRCQVFEETQIG 345 (515)
T ss_pred ECCcccHHHHHHHHH------cCCcccc-----cccHHHHHHHHHHhCCEEeec-----cccCCHHHCCcccEEEEEEEc
Confidence 999999988887753 2456765 467889999999999999996 899999999999999854
Q ss_pred cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHHHHhc-
Q 012693 280 MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE- 358 (458)
Q Consensus 280 ~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a~~~- 358 (458)
+++++||++|+++. .|||++||+|+++++|+||++|||||++|+++++
T Consensus 346 ~~~~~~i~g~~~~~-------------------------------~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~ 394 (515)
T 3iyg_H 346 GERYNFFTGCPKAK-------------------------------TCTIILRGGAEQFMEETERSLHDAIMIVRRAIKND 394 (515)
T ss_pred CeEEEEEecCCCCc-------------------------------eEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 78999999998764 4899999999999999999999999999999998
Q ss_pred CCcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCc
Q 012693 359 GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGN 433 (458)
Q Consensus 359 gvVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~~ 433 (458)
++|||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|+
T Consensus 395 ~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~ 474 (515)
T 3iyg_H 395 SVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTED 474 (515)
T ss_pred CeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCc
Confidence 59999999999999999999875 899999999999999999999999999999999 999873 4567999999999
Q ss_pred cccccccCCccccccHHHHHHhhh
Q 012693 434 YVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 434 ~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
+.||++.|||||+.||+++|++|+
T Consensus 475 ~~dm~~~gI~dp~~vk~~al~~A~ 498 (515)
T 3iyg_H 475 IADNFEAFVWEPAMVRINALTAAS 498 (515)
T ss_pred ccccHhccCEECHHHHHHHHHHHH
Confidence 999999999999999999999986
No 7
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.2e-84 Score=693.99 Aligned_cols=392 Identities=19% Similarity=0.270 Sum_probs=359.9
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 72 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 145 (553)
T 3ko1_A 72 GATILDKMDLQHPAAKLL------VQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQT 145 (553)
T ss_dssp HHHHHHSSCCCSHHHHHH------HHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhccChhHHHH------HHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC--cc-------eeEe--cCCCccceeEEEe
Q 012693 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--DL-------ITIF--DRKALYNELNFVK 144 (458)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~ts~~~------~~~l~~li~~A~~~v~~~--~~-------I~i~--~g~~~~d~~~lv~ 144 (458)
|+++++|++ +.+.|.++|+||+++ +++|++++++|+.+++++ |. |+|+ .|++. +++++++
T Consensus 146 L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~-~ds~lv~ 224 (553)
T 3ko1_A 146 IQELAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSI-NDTQLVY 224 (553)
T ss_dssp HHTTCEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCG-GGCEEES
T ss_pred HHHhcCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCcc-ccceeeE
Confidence 999999987 788999999999875 689999999999999875 55 8886 56665 4699999
Q ss_pred eEEEeccccCCccccccccceeeecCceEEEecc-------------ccCCHHH-----------HHHHHhHHHhcCCcE
Q 012693 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNV-----------IRQASLPCMMQGQSL 200 (458)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~-------------~i~~~~~-----------i~~~l~~i~~~~~~l 200 (458)
||+|+++|.||||+. +++||+|+++|+ +|+++++ +.++++++.+.|+||
T Consensus 225 G~v~dk~~~~~~m~~-------~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~v 297 (553)
T 3ko1_A 225 GIVVDKEVVHPGMPK-------RLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANV 297 (553)
T ss_dssp EEEECSCBSCTTSCS-------CCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSE
T ss_pred EEEecccccCCCCcc-------ccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceE
Confidence 999999999999843 789999999998 4677776 567789999999999
Q ss_pred EEEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEe-
Q 012693 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT- 279 (458)
Q Consensus 201 vii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i~- 279 (458)
||++++|+++++++|..+ ++++|++ +++.+|+|||++|||+++++ ++++++++||+|+.|++.
T Consensus 298 vI~~~~I~~~al~~L~~~------gI~~v~~-----v~k~~leria~~tGa~ivs~-----l~~l~~~~LG~a~~v~~~~ 361 (553)
T 3ko1_A 298 IICQKGIDEVAQSYLAKK------GVLAVRR-----AKKSDLEKLARATGGRVVSN-----IDEISEQDLGYASLIEERK 361 (553)
T ss_dssp EECSSCBCSHHHHHHHHH------TCEEECC-----CCHHHHHHHHTTTTCCEESC-----GGGCCSSSSEECSEEECCC
T ss_pred EEeccChHHHHHHHHHhc------chhhhhh-----hhhhhHHHHHHhhCCeeecc-----cccCChhhcchHHHHHHhh
Confidence 999999999999999853 4688874 56789999999999999996 899999999999999864
Q ss_pred --cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHHHHh
Q 012693 280 --MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (458)
Q Consensus 280 --~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a~~ 357 (458)
+++|+||+||++++ .|||+|||+|+++++|+||++|||||++|++++
T Consensus 362 ig~d~~~~i~g~~~~~-------------------------------~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~ 410 (553)
T 3ko1_A 362 VGEDKMVFVEGAKNPK-------------------------------SISILIRGGLERLVDETERALRDALGTVADVIK 410 (553)
T ss_dssp CSSSCCEEEESCSSSS-------------------------------CEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEeccCCCCc-------------------------------eEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 88999999998765 489999999999999999999999999999999
Q ss_pred cC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CC-CCeeEeCC
Q 012693 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DS-SDLGYNPA 430 (458)
Q Consensus 358 ~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~---~~-~~~G~d~~ 430 (458)
+| +|||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++ .++|||+.
T Consensus 411 ~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~ 490 (553)
T 3ko1_A 411 DGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLY 490 (553)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETT
T ss_pred cCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEee
Confidence 99 9999999999999999999865 899999999999999999999999999999999 999873 23 67999999
Q ss_pred CCccccccccCCccccccHHHHHHhhh
Q 012693 431 RGNYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 431 ~~~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
+|++.||++.|||||+.||+++|++|+
T Consensus 491 ~g~~~d~~~~gI~dp~~vk~~al~~A~ 517 (553)
T 3ko1_A 491 AGQPVDMWQKGVIEPALVKMNAIKAAT 517 (553)
T ss_dssp TTEEEESGGGSCEEETTHHHHHHHHHH
T ss_pred cCCchHHHHhCccchhhhhhhhhhhcc
Confidence 999999999999999999999999986
No 8
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=1.4e-84 Score=693.10 Aligned_cols=392 Identities=18% Similarity=0.240 Sum_probs=359.4
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 61 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 134 (543)
T 3ruv_A 61 GVTILREMSVEHPAAKML------IEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQEL 134 (543)
T ss_dssp HHHHHHHSCCCCHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCcCHHHHHH------HHHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-cc-----eeEe--cCCCccceeEEEeeEE
Q 012693 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-DL-----ITIF--DRKALYNELNFVKGMK 147 (458)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~ts~~~------~~~l~~li~~A~~~v~~~-~~-----I~i~--~g~~~~d~~~lv~G~~ 147 (458)
|+++++|++ +.++|.++|+||+++ ++.|++++++|+.+++++ |. |+|+ .|++.. ++++++||+
T Consensus 135 L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~-ds~lv~G~v 213 (543)
T 3ruv_A 135 LKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASID-DTELIKGVL 213 (543)
T ss_dssp HHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGG-GCEEESSEE
T ss_pred HHHhhCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcc-cceeecceE
Confidence 999999987 788999999999864 789999999999999876 64 7776 566664 699999999
Q ss_pred EeccccCCccccccccceeeecCceEEEeccc-------------cCCHHH-----------HHHHHhHHHhcCCcEEEE
Q 012693 148 LEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNV-----------IRQASLPCMMQGQSLLVV 203 (458)
Q Consensus 148 ~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~-------------i~~~~~-----------i~~~l~~i~~~~~~lvii 203 (458)
|+++|.||||+. +++||+|+++|++ |+++++ +.++++++.+.|+||||+
T Consensus 214 ~dk~~~~~~m~~-------~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~ 286 (543)
T 3ruv_A 214 VDKERVSAQMPK-------KVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFC 286 (543)
T ss_dssp ESCCCSCTTSCS-------EEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred EeccccCccccc-------cccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 999999999843 7899999999983 566665 667789999999999999
Q ss_pred ecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEe---c
Q 012693 204 AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---M 280 (458)
Q Consensus 204 ~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i~---~ 280 (458)
+++|+++++++|..+ ++++|++ +++.+|+|||++|||+++++ ++++++++||+|++|++. +
T Consensus 287 ~~~I~~~al~~L~~~------gI~~v~~-----v~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~ 350 (543)
T 3ruv_A 287 QKGIDDLAQHYLAKE------GIVAARR-----VKKSDMEKLAKATGANVIAA-----IAALSAQDLGDAGLVEERKISG 350 (543)
T ss_dssp SSCBCHHHHHHHHHT------TCEEECS-----CCHHHHHHHHHHHCCCEESC-----GGGCCGGGCEEEEEEEEEEETT
T ss_pred eCCccHHHHHHHHHc------CcEEEee-----CCHHHHHHHHHHhCCceecc-----cccCCHHHCCcccEEEEEEeCC
Confidence 999999999998853 4688874 56789999999999999996 899999999999999864 8
Q ss_pred ceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHHHHhcC-
Q 012693 281 DNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG- 359 (458)
Q Consensus 281 ~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a~~~g- 359 (458)
++|+||++|++++ .|||+|||+|+++++|+||++|||||++|+++++|
T Consensus 351 ~~~~~i~g~~~~~-------------------------------~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~ 399 (543)
T 3ruv_A 351 DSMIFVEECKHPK-------------------------------AVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGR 399 (543)
T ss_dssp EEEEEEECCSSCS-------------------------------SEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred ceEEEEECCCCCc-------------------------------eeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8999999998765 48999999999999999999999999999999999
Q ss_pred CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHh----cCCCCeeEeCCCCc
Q 012693 360 IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLE----QDSSDLGYNPARGN 433 (458)
Q Consensus 360 vVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~----~~~~~~G~d~~~~~ 433 (458)
+|||||++|+++|++|++|+.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++ .++.++|||+.+|+
T Consensus 400 iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~ 479 (543)
T 3ruv_A 400 IVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGA 479 (543)
T ss_dssp EEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCS
T ss_pred eecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCc
Confidence 9999999999999999999865 899999999999999999999999999999999 99986 23468999999999
Q ss_pred cccccccCCccccccHHHHHHhhh
Q 012693 434 YVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 434 ~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
+.||++.|||||+.||+++|++|+
T Consensus 480 ~~dm~~~gI~dp~~vk~~al~~A~ 503 (543)
T 3ruv_A 480 VEDMCENGVVEPLRVKTQAIQSAA 503 (543)
T ss_dssp EEETTTTTCEEEHHHHHHHHHHHH
T ss_pred cccHHHcCCEecHHHHHHHHHHHH
Confidence 999999999999999999999986
No 9
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=4.4e-84 Score=685.42 Aligned_cols=391 Identities=17% Similarity=0.201 Sum_probs=357.0
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+|+||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 54 G~tIlk~i~v~hp~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 127 (513)
T 3iyg_B 54 GATILKNIGVDNPAAKVL------VDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQA 127 (513)
T ss_pred HHHHHHHccccCHHHHHH------HHHHHHhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-----CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---cceeEe--cCCCccceeEEEeeEE
Q 012693 84 LDCQARKIT-----TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITIF--DRKALYNELNFVKGMK 147 (458)
Q Consensus 84 L~~~s~~v~-----~~~~l~~va~ts~~------~~~~l~~li~~A~~~v~~~---~~I~i~--~g~~~~d~~~lv~G~~ 147 (458)
|+++++|++ +.++|.++|+||++ +++.|++++++|+.+++++ +.|+|+ .|++.. ++++++||+
T Consensus 128 L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~-ds~lv~G~v 206 (513)
T 3iyg_B 128 LLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLA-DSYLDEGFL 206 (513)
T ss_pred HHHhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCcc-ceeEEeeEE
Confidence 999999987 46789999987764 3678999999999999987 778886 466665 589999999
Q ss_pred EeccccCCccccccccceeeecCceEEEecc--------------ccCCHHHHHH-----------HHhHHHhcCCcEEE
Q 012693 148 LEWGLKSPYFFTHKNKKECVLDGALVLIYDT--------------KISNSNVIRQ-----------ASLPCMMQGQSLLV 202 (458)
Q Consensus 148 ~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~--------------~i~~~~~i~~-----------~l~~i~~~~~~lvi 202 (458)
|+++|.+| | +.+++||+|+++|+ +|++++++.+ +++++.+.|+||||
T Consensus 207 ~dk~~~~~-m-------~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi 278 (513)
T 3iyg_B 207 LDKKIGVN-Q-------PKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFI 278 (513)
T ss_pred EeccccCC-C-------ceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999988 3 34789999999998 4677777654 68889999999999
Q ss_pred EecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEE---Ee
Q 012693 203 VAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---AT 279 (458)
Q Consensus 203 i~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~---i~ 279 (458)
++++|+++++++|.. .+|++||+|++ .+|+|||++|||+++++ ++++++++||+|++|+ ++
T Consensus 279 ~~~~I~~~al~~L~~------~~I~av~~~~~-----~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig 342 (513)
T 3iyg_B 279 NRQLIYNYPEQLFGA------AGVMAIEHADF-----VGVERLALVTGGEIAST-----FDHPELVKLGSCKLIEEVMIG 342 (513)
T ss_pred EcCCccHHHHHHHHH------cCceEEecCCH-----HHHHHHHHHhCCEEecc-----cccCCHhHCCcccEEEEEEEC
Confidence 999999999998885 46899999875 45999999999999996 8899999999999997 68
Q ss_pred cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHHHHhc-
Q 012693 280 MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE- 358 (458)
Q Consensus 280 ~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a~~~- 358 (458)
++++++|.||+++ ++|||+|||+|+++++|+||++|||||++|+++++
T Consensus 343 ~~~~~~~~g~~~~-------------------------------~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~ 391 (513)
T 3iyg_B 343 EDKLIHFSGVALG-------------------------------EACTIVLRGATQQILDEAERSLHDALCVLAQTVKDS 391 (513)
T ss_pred CeEEEEEecCCCC-------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999998754 46999999999999999999999999999999998
Q ss_pred CCcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCc
Q 012693 359 GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGN 433 (458)
Q Consensus 359 gvVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~~ 433 (458)
++|||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|+
T Consensus 392 ~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~ 471 (513)
T 3iyg_B 392 RTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGT 471 (513)
T ss_pred cEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCC
Confidence 69999999999999999999875 899999999999999999999999999999999 999873 4568999999999
Q ss_pred cccccccCCccccccHHHHHHhhh
Q 012693 434 YVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 434 ~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
+.||++.|||||+.||+++|++|+
T Consensus 472 ~~d~~~~gI~dp~~vk~~al~~A~ 495 (513)
T 3iyg_B 472 IGDMSVLGITESFQVKRQVLLSAA 495 (513)
T ss_pred ccchHhccCEecHHHHHHHHHHHH
Confidence 999999999999999999999986
No 10
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=2.4e-84 Score=685.45 Aligned_cols=392 Identities=18% Similarity=0.240 Sum_probs=330.0
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+|+||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 15 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 88 (500)
T 3aq1_B 15 GATILKEMDIQHPAAKMI------VEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRHAAEKCREI 88 (500)
T ss_dssp ----------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcCCCHHHHHH------HHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 358999999999999988 6999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--cc--------eeEe--cCCCccceeEEE
Q 012693 84 LDCQARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--DL--------ITIF--DRKALYNELNFV 143 (458)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~ts~~------~~~~l~~li~~A~~~v~~~--~~--------I~i~--~g~~~~d~~~lv 143 (458)
|+++++|++ +.++|.++|+||++ +++.|++++++|+.+++++ |. |+|+ +|++.. +++++
T Consensus 89 L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~-ds~lv 167 (500)
T 3aq1_B 89 LETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSID-DSELI 167 (500)
T ss_dssp HHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGG-GCEEE
T ss_pred HHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCcc-ceEEE
Confidence 999999986 47899999998754 4788999999999999865 42 6776 788875 69999
Q ss_pred eeEEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHH-----------HHHHhHHHhcCCc
Q 012693 144 KGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQS 199 (458)
Q Consensus 144 ~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~-------------i~~~~~i-----------~~~l~~i~~~~~~ 199 (458)
+||+|+++|.||||+. +++||+|+++|++ |++++++ .++++++.+.|+|
T Consensus 168 ~G~v~dk~~~~~~m~~-------~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~ 240 (500)
T 3aq1_B 168 DGLVIDKERSHPNMPE-------KVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGAN 240 (500)
T ss_dssp SEEEESCCCSSTTSCS-------EEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTCCS
T ss_pred eeeEEeecCCCCCCcc-------cccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 9999999999999843 7899999999998 6667665 8899999999999
Q ss_pred EEEEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEe
Q 012693 200 LLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT 279 (458)
Q Consensus 200 lvii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i~ 279 (458)
|||++++|+++|+++|..|+ |++|+ ++++++|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 241 lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~ 304 (500)
T 3aq1_B 241 VVFCQKGIDDMAQYYIEKAG------IYAVR-----RVKKSDLKRLSKVTGATIIQD-----LDQITTEDVGTAGLVEEK 304 (500)
T ss_dssp EEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBSC-----TTCCCSTTCEEEEEEEEE
T ss_pred EEEECCCcCHHHHHHHHHCC------EEEEE-----eCCHHHHHHHHHHhCCeEecc-----cccCCHhHCCCceEEEEE
Confidence 99999999999999999864 68886 567889999999999999996 899999999999999865
Q ss_pred ---cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHHHH
Q 012693 280 ---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAK 356 (458)
Q Consensus 280 ---~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a~ 356 (458)
+++|+||+||+++ +.|||+|||+|+++++|+||++|||||++|+++
T Consensus 305 ~ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~ 353 (500)
T 3aq1_B 305 EVRGGKMTYVTGCQNS-------------------------------KAVTVLLHGGTEHVVDSLDHALNDALHVVGVVI 353 (500)
T ss_dssp ECSSSEEEEEEEETTC-------------------------------CCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCeEEEEEECCCCC-------------------------------ceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999998754 469999999999999999999999999999999
Q ss_pred hcC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCC
Q 012693 357 EEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPA 430 (458)
Q Consensus 357 ~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~ 430 (458)
++| +|||||++|++++++|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.
T Consensus 354 ~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~ 433 (500)
T 3aq1_B 354 EDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVY 433 (500)
T ss_dssp HHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTT
T ss_pred HCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCC
Confidence 999 9999999999999999999864 899999999999999999999999999999999 999862 4468999999
Q ss_pred CCccccccccCCccccccHHHHHHhhh
Q 012693 431 RGNYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 431 ~~~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
+|++.||++.|||||+.||+++|++|+
T Consensus 434 ~g~~~d~~~~gI~dp~~vk~~al~~A~ 460 (500)
T 3aq1_B 434 TGEVVDMWENDVIEPLRIKTQAINAAM 460 (500)
T ss_dssp TCCEEETTTTTCEEEHHHHHHHHHHHH
T ss_pred CCCccchHhcCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999986
No 11
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.3e-84 Score=694.91 Aligned_cols=397 Identities=17% Similarity=0.258 Sum_probs=360.7
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 66 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 139 (559)
T 3p9d_A 66 GATILSLLDVQHPAGKIL------VELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRF 139 (559)
T ss_dssp HHHHHHHHCCCSHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHH------HHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred Hhc-cccccCC--HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhcc-----Ccc-----eeEe--cCCCccceeEE
Q 012693 84 LDC-QARKITT--FEEIAQVGTTAANG------DGEIGELIAKVFEKGWE-----NDL-----ITIF--DRKALYNELNF 142 (458)
Q Consensus 84 L~~-~s~~v~~--~~~l~~va~ts~~~------~~~l~~li~~A~~~v~~-----~~~-----I~i~--~g~~~~d~~~l 142 (458)
|++ +++|++. .++|.++|+||+++ +++|++++++|+.++++ ++. |+|. .|++.. ++++
T Consensus 140 L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~-ds~l 218 (559)
T 3p9d_A 140 INEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSAT-ESLL 218 (559)
T ss_dssp HHHHTGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSS-CCBC
T ss_pred HHHhcccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCcc-ceeE
Confidence 999 9999874 67899999999986 68999999999999983 244 5554 388876 4899
Q ss_pred EeeEEEeccccCCccccccccceeeec--CceEEEecccc-------------CCHHH-----------HHHHHhHHHhc
Q 012693 143 VKGMKLEWGLKSPYFFTHKNKKECVLD--GALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQ 196 (458)
Q Consensus 143 v~G~~~~~g~~~~~~~~~~~~~~~~~~--~~~Il~~d~~i-------------~~~~~-----------i~~~l~~i~~~ 196 (458)
++||+|+++|.||||++ .++ ||+|+++|++| +++++ +.++++++.+.
T Consensus 219 v~G~v~dk~~~~~~m~~-------~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~ 291 (559)
T 3p9d_A 219 VPGYALNCTVASQAMPK-------RIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDA 291 (559)
T ss_dssp CSEECCCCCCSSTTSCS-------EECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eccEEEeecccCCCcce-------eeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999853 677 99999999876 34433 67889999999
Q ss_pred CCcEEEEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCc-cCCCCCCceeeeE
Q 012693 197 GQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNS-TYFVPLKLGSCKR 275 (458)
Q Consensus 197 ~~~lvii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~-~~~~~~~LG~~~~ 275 (458)
|+||||++++|+++|+++|..|+ +++|+ +.++.+|+|||++|||+++++..++.+ +++++++||+|+.
T Consensus 292 g~~lvI~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~ 360 (559)
T 3p9d_A 292 GAQVVLTTKGIDDLCLKEFVEAK------IMGVR-----RCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDE 360 (559)
T ss_dssp CCSEEEESSCCCGGGTHHHHHTT------CEEES-----SCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEE
T ss_pred CCCEEEEcCCCCHHHHHHHHHcC------CceEc-----cCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceE
Confidence 99999999999999999999875 57886 467789999999999999998766654 8899999999999
Q ss_pred EE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHH
Q 012693 276 VI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAV 352 (458)
Q Consensus 276 v~---i~~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~ 352 (458)
|+ +++++|+||+||+++ ++|||+|||+|+++++|+||++|||||++
T Consensus 361 v~~~~ig~~~~~~~~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAL~~~ 409 (559)
T 3p9d_A 361 VVQAKFSDDECILIKGTSKH-------------------------------SSSSIILRGANDYSLDEMERSLHDSLSVV 409 (559)
T ss_dssp EEEEECSSCEEECEEEESSS-------------------------------CCCCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCceEEEEEcCCCC-------------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 98 689999999998754 56999999999999999999999999999
Q ss_pred HHHHhcC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCC---
Q 012693 353 QAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSS--- 423 (458)
Q Consensus 353 r~a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~---~~~--- 423 (458)
|+++++| +|||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.
T Consensus 410 r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~ 489 (559)
T 3p9d_A 410 KRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKP 489 (559)
T ss_dssp HHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC-
T ss_pred HHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccc
Confidence 9999999 9999999999999999999875 899999999999999999999999999999999 999863 333
Q ss_pred ---------CeeEeCCCCccccccccCCccccccHHHHHHhhh
Q 012693 424 ---------DLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 424 ---------~~G~d~~~~~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
++|||+.+|++.||++.|||||+.||+++|++|+
T Consensus 490 ~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 532 (559)
T 3p9d_A 490 EDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSAL 532 (559)
T ss_dssp ---CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHH
T ss_pred cccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHH
Confidence 7999999999999999999999999999999986
No 12
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1e-83 Score=687.01 Aligned_cols=392 Identities=18% Similarity=0.269 Sum_probs=361.8
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+|+||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 65 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 138 (548)
T 1q3q_A 65 CATILDKIDLQHPAAKMM------VEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEI 138 (548)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--c-------ceeEe--cCCCccceeEEEe
Q 012693 84 LDCQARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--D-------LITIF--DRKALYNELNFVK 144 (458)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~ts~~------~~~~l~~li~~A~~~v~~~--~-------~I~i~--~g~~~~d~~~lv~ 144 (458)
|+++++|++ +.++|.++|+||++ +++.|++++++|+.+++++ | .|+|+ +|++.. ++++++
T Consensus 139 L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~ 217 (548)
T 1q3q_A 139 LDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVE-ESELVR 217 (548)
T ss_dssp HHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGG-GCEEES
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCcc-ceEEEe
Confidence 999999987 37899999998764 3678999999999999875 3 68887 888886 579999
Q ss_pred eEEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHH-----------HHHHhHHHhcCCcE
Q 012693 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSL 200 (458)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~-------------i~~~~~i-----------~~~l~~i~~~~~~l 200 (458)
||+|+++|.||||+. +++||+|+++|++ |++++++ .++++++.+.|+||
T Consensus 218 G~v~dk~~~~~~m~~-------~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~l 290 (548)
T 1q3q_A 218 GVVIDKEVVHPRMPK-------RVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANV 290 (548)
T ss_dssp SEEESCCCSSTTSCS-------EESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred eEEEeccCCCCCCcc-------eecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCE
Confidence 999999999999842 6899999999998 7788775 78899999999999
Q ss_pred EEEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEe-
Q 012693 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT- 279 (458)
Q Consensus 201 vii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i~- 279 (458)
||++++|+++|+++|..|+ |++|+ ++++++|+|||++|||+++++ ++++++++||+|+.|++.
T Consensus 291 vi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ 354 (548)
T 1q3q_A 291 VFVQKGIDDLAQHYLAKYG------IMAVR-----RVKKSDMEKLAKATGAKIVTN-----VKDLTPEDLGYAEVVEERK 354 (548)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBSS-----GGGCCGGGCEEESEEEEEE
T ss_pred EEEcCCcCHHHHHHHHHCC------cEEEc-----cCCHHHHHHHHHHhCCeEecc-----cccCCHHHCCCceEEEEEE
Confidence 9999999999999999864 68886 567889999999999999996 899999999999999864
Q ss_pred --cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHHHHh
Q 012693 280 --MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (458)
Q Consensus 280 --~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a~~ 357 (458)
+++|+||++|+++ +.|||+|||+|+++++|+||++|||||++|++++
T Consensus 355 ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~ 403 (548)
T 1q3q_A 355 LAGENMIFVEGCKNP-------------------------------KAVTILIRGGTEHVIDEVERALEDAVKVVKDVME 403 (548)
T ss_dssp ETTEEEEEEECCSSC-------------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEecCCCC-------------------------------CeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999765 4699999999999999999999999999999999
Q ss_pred cC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCC
Q 012693 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR 431 (458)
Q Consensus 358 ~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~ 431 (458)
+| +|||||++|++++++|++|+.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+
T Consensus 404 ~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 483 (548)
T 1q3q_A 404 DGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFE 483 (548)
T ss_dssp SCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTT
T ss_pred CCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCC
Confidence 99 9999999999999999999865 899999999999999999999999999999999 999863 44689999999
Q ss_pred CccccccccCCccccccHHHHHHhhh
Q 012693 432 GNYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 432 ~~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
|++.||++.|||||+.||+++|++|+
T Consensus 484 g~~~d~~~~gI~dp~~vk~~al~~A~ 509 (548)
T 1q3q_A 484 GKPADMLEKGIIEPLRVKKQAIKSAS 509 (548)
T ss_dssp TEEEETTTTTCEEEHHHHHHHHHHHH
T ss_pred CCccchhhcCCEecHHHHHHHHHHHH
Confidence 99999999999999999999999986
No 13
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.1e-83 Score=686.57 Aligned_cols=391 Identities=19% Similarity=0.249 Sum_probs=360.8
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+|+||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 64 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 137 (545)
T 1a6d_A 64 GATILKEMDVEHPTAKMI------VEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKI 137 (545)
T ss_dssp HHHHHHHSCCCSHHHHHH------HGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---------cceeEe--cCCCccceeEEEee
Q 012693 84 LDCQARKIT-TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---------DLITIF--DRKALYNELNFVKG 145 (458)
Q Consensus 84 L~~~s~~v~-~~~~l~~va~ts~~------~~~~l~~li~~A~~~v~~~---------~~I~i~--~g~~~~d~~~lv~G 145 (458)
|+++++| + +.++|.++|+||++ +++.|++++++|+.+++++ +.|+|+ +|++.. ++++++|
T Consensus 138 L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~G 215 (545)
T 1a6d_A 138 IDEIAEK-STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVN-DTQFISG 215 (545)
T ss_dssp HHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCST-TCEEESE
T ss_pred HHHhcCC-CCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCce-eeEEEee
Confidence 9999999 7 78899999998754 3688999999999999865 368887 888876 5799999
Q ss_pred EEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHH-----------HHHHhHHHhcCCcEE
Q 012693 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLL 201 (458)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~-------------i~~~~~i-----------~~~l~~i~~~~~~lv 201 (458)
|+|+++|.||||+. .++||+|+++|++ |++++++ .++++++.+.|+|||
T Consensus 216 ~v~dk~~~~~~m~~-------~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lv 288 (545)
T 1a6d_A 216 IVIDKEKVHSKMPD-------VVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVV 288 (545)
T ss_dssp EEESCCCSCTTSCS-------EEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred EEEeccCCCCCCcc-------eecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 99999999999842 6899999999998 6777765 788999999999999
Q ss_pred EEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEe--
Q 012693 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT-- 279 (458)
Q Consensus 202 ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i~-- 279 (458)
|++++|+++|+++|..|+ |++|+ ++++++|+|||++|||+++++ ++++++++||+|+.|++.
T Consensus 289 i~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~i 352 (545)
T 1a6d_A 289 LCQKGIDDVAQHYLAKEG------IYAVR-----RVKKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEERKI 352 (545)
T ss_dssp EESSCBCHHHHHHHHHHT------CEEEC-----SCCHHHHHHHHHHHCCCEESS-----GGGCCGGGCEEEEEEEEEEE
T ss_pred EECCCccHHHHHHHHHCC------eeEec-----cCCHHHHHHHHHHhCCeeecc-----cccCCHHHCCCceEEEEEEe
Confidence 999999999999999874 68887 467889999999999999996 899999999999999864
Q ss_pred -cceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHHHHhc
Q 012693 280 -MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (458)
Q Consensus 280 -~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a~~~ 358 (458)
+++|+||++|+++ +.|||+|||+|+++++|+||++|||||++|+++++
T Consensus 353 g~~~~~~~~g~~~~-------------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~ 401 (545)
T 1a6d_A 353 GDDRMTFVMGCKNP-------------------------------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKED 401 (545)
T ss_dssp TTEEEEEEEEESCS-------------------------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEecCCCC-------------------------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7899999998764 46999999999999999999999999999999999
Q ss_pred C-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCC
Q 012693 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARG 432 (458)
Q Consensus 359 g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~ 432 (458)
| +|||||++|++++++|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|
T Consensus 402 g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g 481 (545)
T 1a6d_A 402 GKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNN 481 (545)
T ss_dssp CEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTT
T ss_pred CCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccC
Confidence 9 9999999999999999999865 899999999999999999999999999999999 999862 446899999999
Q ss_pred ccccccccCCccccccHHHHHHhhh
Q 012693 433 NYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 433 ~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
++.||++.|||||+.||+++|++|+
T Consensus 482 ~~~d~~~~gI~dp~~vk~~al~~A~ 506 (545)
T 1a6d_A 482 GVGDMKAKGVVDPLRVKTHALESAV 506 (545)
T ss_dssp EEEEHHHHTCEEEHHHHHHHHHHHH
T ss_pred ccccchhcCccccHHHHHHHHHHHH
Confidence 9999999999999999999999986
No 14
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.1e-83 Score=682.47 Aligned_cols=397 Identities=15% Similarity=0.180 Sum_probs=357.1
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+|+||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 52 G~tIlk~i~v~hP~akll------~~~a~~qd~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (529)
T 3iyg_A 52 GATILKLLEVEHPAAKVL------CELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRY 125 (529)
T ss_pred HHHHHHHcccCChHHHHH------HHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred Hhc-cccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhc---cCc-----c--eeEe--cCCCccceeEE
Q 012693 84 LDC-QARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGW---END-----L--ITIF--DRKALYNELNF 142 (458)
Q Consensus 84 L~~-~s~~v~--~~~~l~~va~ts~~------~~~~l~~li~~A~~~v~---~~~-----~--I~i~--~g~~~~d~~~l 142 (458)
|++ +++|++ +.+.|.++|+||++ ++++|++++++|+.+++ ++| . |+|+ .|+++. ++++
T Consensus 126 L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~-ds~l 204 (529)
T 3iyg_A 126 ISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQM-ESML 204 (529)
T ss_pred HHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCcc-ceEE
Confidence 999 999987 67899999999875 36899999999999997 333 2 6664 577665 5899
Q ss_pred EeeEEEeccccCCccccccccceeeecCceEEEecccc-------------CCHHH-----------HHHHHhHHHhcCC
Q 012693 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQGQ 198 (458)
Q Consensus 143 v~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~i-------------~~~~~-----------i~~~l~~i~~~~~ 198 (458)
++||+|+++|.||||++ .++||+|+++|+++ +++++ +.++++++.+.|+
T Consensus 205 v~G~v~dk~~~~~~m~~-------~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~ 277 (529)
T 3iyg_A 205 INGYALNCVVGSQGMPK-------RIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGA 277 (529)
T ss_pred EeeeEEecCcccccCCc-------ccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999864 67899999999854 34433 5677889999999
Q ss_pred cEEEEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCC-ccCCCCCCceeeeEEE
Q 012693 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMN-STYFVPLKLGSCKRVI 277 (458)
Q Consensus 199 ~lvii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~-~~~~~~~~LG~~~~v~ 277 (458)
|+||++++|+++|+++|..|+ |++|++ .++++|+|||++|||+++++..+++ .+++++++||+|+.|+
T Consensus 278 nvvi~~~~I~d~al~~L~~~g------I~av~~-----v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~ 346 (529)
T 3iyg_A 278 NVILTTGGIDDMCLKYFVEAG------AMAVRR-----VLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVV 346 (529)
T ss_pred CEEEECCCCCHHHHHHHHHcC------Cceecc-----CCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEE
Confidence 999999999999999999874 688884 5678899999999999999865544 3556788999999997
Q ss_pred ---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHH
Q 012693 278 ---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQA 354 (458)
Q Consensus 278 ---i~~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~ 354 (458)
+++++++||+||+++. .|||+|||+|+++++|+||++|||||++|+
T Consensus 347 ~~~ig~~~~~~~~g~~~~~-------------------------------~~TI~lrG~t~~~l~E~er~l~Dal~v~r~ 395 (529)
T 3iyg_A 347 QERICDDELILIKNTKART-------------------------------SASVILRGANDFMCDEMERSLHDALCVVKR 395 (529)
T ss_pred EEEeCCceEEEEEcCCCCc-------------------------------eEEEEECCchHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999998753 599999999999999999999999999999
Q ss_pred HHhcC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CC------
Q 012693 355 AKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DS------ 422 (458)
Q Consensus 355 a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~---~~------ 422 (458)
++++| +|||||++|+++|++|++|+.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++
T Consensus 396 ~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~ 475 (529)
T 3iyg_A 396 VLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERK 475 (529)
T ss_pred HhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccc
Confidence 99999 9999999999999999999876 899999999999999999999999999999999 999863 22
Q ss_pred --CCeeEeCCCCccccccccCCccccccHHHHHHhhh
Q 012693 423 --SDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 423 --~~~G~d~~~~~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
.++|||+.+|++.||++.|||||+.||+++|++|+
T Consensus 476 ~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~ 512 (529)
T 3iyg_A 476 NLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFAT 512 (529)
T ss_pred cCceeeeeCCCCCccChhhccCEecHHHHHHHHHHHH
Confidence 57999999999999999999999999999999997
No 15
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.8e-83 Score=677.55 Aligned_cols=399 Identities=16% Similarity=0.176 Sum_probs=355.2
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 52 G~tIlk~i~~~hP~Akll------~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (515)
T 3iyg_E 52 GATILSMMDVDHQIAKLM------VELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEH 125 (515)
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCC----HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-------cceeEe--cCCCccceeEEEe
Q 012693 84 LDCQARKITT----FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNFVK 144 (458)
Q Consensus 84 L~~~s~~v~~----~~~l~~va~ts~~~------~~~l~~li~~A~~~v~~~-------~~I~i~--~g~~~~d~~~lv~ 144 (458)
|+++++|++. .++|.++|+||+++ .+.|++++++|+..+... +.|+|+ .|++.. ++++++
T Consensus 126 L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~-ds~lv~ 204 (515)
T 3iyg_E 126 LDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLE-DTKLIK 204 (515)
T ss_pred HHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcc-cceEEe
Confidence 9999988753 58899999999985 357889999999888541 246665 577776 589999
Q ss_pred eEEEeccccCCcccccccc-ceeeecCceEEE-----eccccCCHHHH-----------HHHHhHHHhcCCcEEEEecCc
Q 012693 145 GMKLEWGLKSPYFFTHKNK-KECVLDGALVLI-----YDTKISNSNVI-----------RQASLPCMMQGQSLLVVAEDV 207 (458)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~-~~~~~~~~~Il~-----~d~~i~~~~~i-----------~~~l~~i~~~~~~lvii~~~i 207 (458)
||+|+++|.||||+++.+. +...+++|+.+. ++.+|++++++ .++++++.+.|+||||++++|
T Consensus 205 G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I 284 (515)
T 3iyg_E 205 GVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGF 284 (515)
T ss_pred eEEEecccccccccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 9999999999999876543 334556665544 34457788775 678999999999999999999
Q ss_pred chhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEE-----ecce
Q 012693 208 ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-----TMDN 282 (458)
Q Consensus 208 ~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i-----~~~~ 282 (458)
+++|+++|..|+ +.+++++ ++.+|+|||++|||+++++ ++++++++||+|++|++ ++++
T Consensus 285 ~~~al~~L~~~~------I~~v~~v-----~k~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~k~~ 348 (515)
T 3iyg_E 285 DDEANHLLLQND------LPAVRWV-----GGPEIELIAIATGGRIVPR-----FSELTAEKLGFAGLVKEISFGTTKDK 348 (515)
T ss_pred CHHHHHHHHHCC------CEEEecc-----CHHHHHHHHHHhCCEEecc-----cccCCHHHCCcceEEEEEEeccccce
Confidence 999999999875 4678765 4678999999999999996 89999999999999986 4589
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHHHHhcC-Cc
Q 012693 283 VVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IV 361 (458)
Q Consensus 283 ~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a~~~g-vV 361 (458)
++||+||++++ .|||+|||+|+++++|+||++|||||++|+++++| +|
T Consensus 349 ~~~~~g~~~~~-------------------------------~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iV 397 (515)
T 3iyg_E 349 MLVIEQCKNSR-------------------------------AVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 397 (515)
T ss_pred EEEEEcCCCCc-------------------------------eEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 99999998764 48999999999999999999999999999999999 99
Q ss_pred CChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCccc
Q 012693 362 PGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGNYV 435 (458)
Q Consensus 362 pGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~----~~~~~G~d~~~~~~~ 435 (458)
||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.
T Consensus 398 pGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~ 477 (515)
T 3iyg_E 398 YGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTN 477 (515)
T ss_pred CCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCccc
Confidence 99999999999999999876 899999999999999999999999999999999 999862 456899999999999
Q ss_pred cccccCCccccccHHHHHHhhh
Q 012693 436 DMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 436 dm~~~gI~dp~~vk~~al~~A~ 457 (458)
||++.|||||+.||+++|++|+
T Consensus 478 d~~~~gI~dp~~vk~~al~~A~ 499 (515)
T 3iyg_E 478 DMKHQHVIETLIGKKQQISLAT 499 (515)
T ss_pred chHhccCEEcHHHHHHHHHHHH
Confidence 9999999999999999999986
No 16
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.6e-83 Score=685.27 Aligned_cols=392 Identities=19% Similarity=0.258 Sum_probs=360.7
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+|+||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 63 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 136 (543)
T 1a6d_B 63 GVTILKEMDVEHPAAKMM------VEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRV 136 (543)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCC--HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--c-------ceeEe--cCCCccceeEEEe
Q 012693 84 LDCQARKITT--FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--D-------LITIF--DRKALYNELNFVK 144 (458)
Q Consensus 84 L~~~s~~v~~--~~~l~~va~ts~~------~~~~l~~li~~A~~~v~~~--~-------~I~i~--~g~~~~d~~~lv~ 144 (458)
|++++.|++. .++|.++|+||++ +++.|++++++|+.+++++ | .|+|+ +|++.. ++++++
T Consensus 137 L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~ 215 (543)
T 1a6d_B 137 IDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAID-DTQLIN 215 (543)
T ss_dssp HHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGG-GCEEES
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCcc-ceeEEc
Confidence 9999999874 6889999997754 3678999999999999876 5 28887 888886 579999
Q ss_pred eEEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHH-----------HHHHhHHHhcCCcE
Q 012693 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSL 200 (458)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~-------------i~~~~~i-----------~~~l~~i~~~~~~l 200 (458)
||+|+++|.||||+. .++||+|+++|++ |++++++ .++++++.+.|+||
T Consensus 216 G~v~dk~~~~~~m~~-------~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~l 288 (543)
T 1a6d_B 216 GIIVDKEKVHPGMPD-------VVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANV 288 (543)
T ss_dssp EEEESCCCSSTTSCS-------EEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred cEEEecCCCCCCCcc-------eecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 999999999999842 6899999999998 7777765 78899999999999
Q ss_pred EEEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEE--
Q 012693 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-- 278 (458)
Q Consensus 201 vii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i-- 278 (458)
||++++|+++|+++|..|+ |++|+ ++++++|+|||++|||+++++ ++++++++||+|+.|++
T Consensus 289 vi~~~~I~~~al~~L~~~~------I~av~-----~v~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ 352 (543)
T 1a6d_B 289 VITQKGIDDMAQHYLSRAG------IYAVR-----RVKKSDMDKLAKATGASIVST-----IDEISSSDLGTAERVEQVK 352 (543)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHTCCEESC-----GGGCCGGGCEEEEEEEEEE
T ss_pred EEECCCcCHHHHHHHHHCC------eeEec-----cCCHHHHHHHHHHhCCceecc-----cccCCHHHCCCceEEEEEE
Confidence 9999999999999999864 68887 467889999999999999996 89999999999999986
Q ss_pred -ecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHHHHh
Q 012693 279 -TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (458)
Q Consensus 279 -~~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a~~ 357 (458)
++++++||+||+++ +.|||+|||+|+++++|+||++|||||++|++++
T Consensus 353 ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~ 401 (543)
T 1a6d_B 353 VGEDYMTFVTGCKNP-------------------------------KAVSILVRGETEHVVDEMERSITDSLHVVASALE 401 (543)
T ss_dssp ETTEEEEEEEEESSS-------------------------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEecCCCC-------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48899999998765 4699999999999999999999999999999999
Q ss_pred cC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCC
Q 012693 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR 431 (458)
Q Consensus 358 ~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~ 431 (458)
+| +|||||++|++++.+|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+
T Consensus 402 ~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 481 (543)
T 1a6d_B 402 DGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFT 481 (543)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTT
T ss_pred CCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCC
Confidence 99 9999999999999999999864 889999999999999999999999999999999 999863 45689999999
Q ss_pred CccccccccCCccccccHHHHHHhhh
Q 012693 432 GNYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 432 ~~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
|++.||++.|||||+.||+++|++|+
T Consensus 482 g~~~d~~~~gI~dp~~vk~~al~~A~ 507 (543)
T 1a6d_B 482 GEIEDMVKNGVIEPIRVGKQAIESAT 507 (543)
T ss_dssp TEEEETTTTTCEEEHHHHHHHHHHHH
T ss_pred CcccchhhcCceecHHHHHHHHHHHH
Confidence 99999999999999999999999986
No 17
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=3.8e-84 Score=687.63 Aligned_cols=396 Identities=15% Similarity=0.145 Sum_probs=357.6
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 61 G~tIlk~i~v~hP~akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 134 (528)
T 3p9d_D 61 GHTILKQMAILHPVARML------VEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDI 134 (528)
T ss_dssp HHHHHHHSCCCCTTHHHH------HHHHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhcc--CcceeEe-------cCCCccceeEEEeeE
Q 012693 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWE--NDLITIF-------DRKALYNELNFVKGM 146 (458)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~ts~~~------~~~l~~li~~A~~~v~~--~~~I~i~-------~g~~~~d~~~lv~G~ 146 (458)
|++++.|++ +.++|.++|+||+++ ++.|++++++|+.++++ ++.|.++ .|+++. ++++++||
T Consensus 135 L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~-ds~lv~G~ 213 (528)
T 3p9d_D 135 LLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTID-DTEMIDGV 213 (528)
T ss_dssp HHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSC-CCEEESSC
T ss_pred HHHhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCcc-ceEEEeee
Confidence 999999987 788999999999975 57899999999999986 4544433 387776 58999999
Q ss_pred EEeccccCCccccccccceeeecCceEEEeccccC-------------CHH-----------HHHHHHhHHHhcCCcEEE
Q 012693 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPCMMQGQSLLV 202 (458)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~i~-------------~~~-----------~i~~~l~~i~~~~~~lvi 202 (458)
+|+++|.|||| |+..++||+|++++++|+ +++ ++.++++++.+.|+||||
T Consensus 214 v~dk~~~~~~~------m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi 287 (528)
T 3p9d_D 214 VLTQTAIKSAG------GPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLL 287 (528)
T ss_dssp BCCCCCCCSSS------CCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEeecccCccc------CcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999995 334899999999999765 444 378899999999999999
Q ss_pred EecCc-----chhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEE
Q 012693 203 VAEDV-----ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI 277 (458)
Q Consensus 203 i~~~i-----~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~ 277 (458)
++++| +++++++|..| +|++|++ .++.+|+|||++|||+++++ ++++++++||+|+.|+
T Consensus 288 ~~~~I~~~a~~~~al~~L~~~------~I~av~~-----~~k~~le~ia~~tGa~ii~~-----~~~l~~~~LG~a~~v~ 351 (528)
T 3p9d_D 288 IQKSILRDAVNDLALHFLSKL------NIMVVKD-----IEREEIEFLSKGLGCKPIAD-----IELFTEDRLDSADLVE 351 (528)
T ss_dssp ESSCSCTTSCSCHHHHHHTTT------SCCEEEC-----CCTHHHHHHHHHHTCCCCSC-----STTCCSSSEEEESCEE
T ss_pred EeCCcccccCCHHHHHHHHHc------CcEEEEe-----CCHHHHHHHHHHHCCEEecc-----cccCCHHHCCcccEEE
Confidence 99999 99999988865 4689985 45678999999999999997 7889999999999997
Q ss_pred ---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHH
Q 012693 278 ---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQA 354 (458)
Q Consensus 278 ---i~~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~ 354 (458)
++++++++|.+|.... .++.|||+|||+|+++++|+||++|||||++|+
T Consensus 352 ~~~ig~~~~~~i~g~~~~~----------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~ 403 (528)
T 3p9d_D 352 EIDSDGSKIVRVTGIRNNN----------------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRC 403 (528)
T ss_dssp CCEETTEECCBCTTBCCGG----------------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHH
T ss_pred EEEECCEEEEEEEcccccC----------------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4577889999876311 146799999999999999999999999999999
Q ss_pred HHhcC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEe
Q 012693 355 AKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYN 428 (458)
Q Consensus 355 a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~---~~~~~G~d 428 (458)
++++| +|||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||
T Consensus 404 av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d 483 (528)
T 3p9d_D 404 LVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGIS 483 (528)
T ss_dssp HHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCC
T ss_pred HHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCcccee
Confidence 99999 9999999999999999999875 899999999999999999999999999999999 999873 45689999
Q ss_pred CCCCccccccccCCccccccHHHHHHhhh
Q 012693 429 PARGNYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 429 ~~~~~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
+.+|++.||++.|||||+.||+++|++|+
T Consensus 484 ~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 512 (528)
T 3p9d_D 484 VRRSGTTNTYEEHILQPVLVSTSAITLAS 512 (528)
T ss_dssp SSSSSCCCHHHHCCEEEHHHHHHHHHHHH
T ss_pred cCCCCccchHhccCeecHHHHHHHHHHHH
Confidence 99999999999999999999999999986
No 18
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8e-83 Score=676.49 Aligned_cols=392 Identities=16% Similarity=0.188 Sum_probs=350.6
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 53 G~tIlk~i~v~hP~akll------~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 126 (518)
T 3iyg_D 53 GATILKQMQVLHPAARML------VELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEI 126 (518)
T ss_pred HHHHHHHcccchHHHHHH------HHHHHHhhhhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCCC------hhHHHHHHHHHHhhcc---Ccc-----eeEe--cCCCccceeEEEee
Q 012693 84 LDCQARKIT--TFEEIAQVGTTAANGD------GEIGELIAKVFEKGWE---NDL-----ITIF--DRKALYNELNFVKG 145 (458)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~ts~~~~------~~l~~li~~A~~~v~~---~~~-----I~i~--~g~~~~d~~~lv~G 145 (458)
|++++.|++ +.++|.++|+||++++ +.|++++++|+.++++ ++. |+|+ .|++.. ++++++|
T Consensus 127 L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~-ds~lv~G 205 (518)
T 3iyg_D 127 LTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTID-DCELVEG 205 (518)
T ss_pred HHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChh-hheEecc
Confidence 999999987 6789999999999864 7899999999999985 454 7776 466654 6899999
Q ss_pred EEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHH-----------HHHHHHhHHHhcCCcEE
Q 012693 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSN-----------VIRQASLPCMMQGQSLL 201 (458)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~-------------i~~~~-----------~i~~~l~~i~~~~~~lv 201 (458)
|+|+++|.| .|+. .++||+|++++++ |++++ ++.++++++.+.|+|||
T Consensus 206 ~~~dk~~~~-~mp~-------~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lv 277 (518)
T 3iyg_D 206 LVLTQKVAN-SGIT-------RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVL 277 (518)
T ss_pred EEEeccccc-CCCc-------cccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 999999998 3221 3456666666554 45554 46788999999999999
Q ss_pred EE-----ecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEE
Q 012693 202 VV-----AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRV 276 (458)
Q Consensus 202 ii-----~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v 276 (458)
|+ +++|+++|+++|..| +|++||+|++ .+|+|||++|||+++++ ++++++++||+|+.|
T Consensus 278 i~~k~i~~~~I~~~Al~~L~~~------~I~av~~~~~-----~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v 341 (518)
T 3iyg_D 278 LIQKSILRDALSDLALHFLNKM------KIMVVKDIER-----EDIEFICKTIGTKPVAH-----VDQFTADMLGSAELA 341 (518)
T ss_pred EEeccccccCcCHHHHHHHHHc------CcEEEecCCH-----HHHHHHHHHhCCEEecc-----cccCCHHHCCcCcEE
Confidence 99 799999999999975 5799999865 45999999999999997 899999999999999
Q ss_pred EE---ec-ceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHH
Q 012693 277 IA---TM-DNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAV 352 (458)
Q Consensus 277 ~i---~~-~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~ 352 (458)
++ ++ +++++|++|++ ++++|||+|||+|+++++|+||++|||||++
T Consensus 342 ~~~~~g~~~~~~~~~g~~~------------------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~ 391 (518)
T 3iyg_D 342 EEVSLNGSGKLIKITGCAS------------------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVI 391 (518)
T ss_pred EEEEeCCCceEEEEECCCC------------------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 75 45 68899999864 2357999999999999999999999999999
Q ss_pred HHHHhcC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHh---cCCCCee
Q 012693 353 QAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLE---QDSSDLG 426 (458)
Q Consensus 353 r~a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~---~~~~~~G 426 (458)
|+++++| +|||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++ .++.++|
T Consensus 392 r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G 471 (518)
T 3iyg_D 392 RCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTG 471 (518)
T ss_pred HHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCcee
Confidence 9999998 9999999999999999999875 899999999999999999999999999999999 99987 2556899
Q ss_pred EeCCCCccccccccCCccccccHHHHHHhhh
Q 012693 427 YNPARGNYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 427 ~d~~~~~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
||+.+|++.||++.|||||+.||+++|++|+
T Consensus 472 ~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 502 (518)
T 3iyg_D 472 INVRKGGISNILEELVVQPLLVSVSALTLAT 502 (518)
T ss_pred EeCCCCcccchhhccCEEcHHHHHHHHHHHH
Confidence 9999999999999999999999999999986
No 19
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.8e-82 Score=671.89 Aligned_cols=398 Identities=15% Similarity=0.193 Sum_probs=352.6
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+++||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 53 G~tIlk~i~v~hP~Akll------~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~ 126 (512)
T 3iyg_Q 53 AATILRELEVQHPAAKMI------VMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEI 126 (512)
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred Hhcc----ccccCCHHHHHHHHHHhcCC-----ChhHHHHHHHHHHhhccC-cceeEe-------cCCCccceeEEEeeE
Q 012693 84 LDCQ----ARKITTFEEIAQVGTTAANG-----DGEIGELIAKVFEKGWEN-DLITIF-------DRKALYNELNFVKGM 146 (458)
Q Consensus 84 L~~~----s~~v~~~~~l~~va~ts~~~-----~~~l~~li~~A~~~v~~~-~~I~i~-------~g~~~~d~~~lv~G~ 146 (458)
|+++ +.++++.++|.++|+||+++ +++|++++++|+.+++++ +.|.++ .|+++ +++++++||
T Consensus 127 L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~-~ds~lv~G~ 205 (512)
T 3iyg_Q 127 LPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGV-HSSSVLHGM 205 (512)
T ss_pred HHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCc-ccceEEeeE
Confidence 9998 56777889999999999986 688999999999999876 444433 37777 579999999
Q ss_pred EEeccccCCcccccccc-ceeeecCce-EEEeccc----cCCHHHHHHH-------Hh----HHHhcCCcEEEEecCcch
Q 012693 147 KLEWGLKSPYFFTHKNK-KECVLDGAL-VLIYDTK----ISNSNVIRQA-------SL----PCMMQGQSLLVVAEDVEN 209 (458)
Q Consensus 147 ~~~~g~~~~~~~~~~~~-~~~~~~~~~-Il~~d~~----i~~~~~i~~~-------l~----~i~~~~~~lvii~~~i~~ 209 (458)
+|+++|.+ |+++.+. +...+++|+ +..++.+ |++++++.++ |+ ++.+.|+||||++++|++
T Consensus 206 ~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~ 283 (512)
T 3iyg_Q 206 VFKKETEG--DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVAD 283 (512)
T ss_pred EEecCcCC--CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccH
Confidence 99999976 6664442 233456665 5666655 7888888776 55 888999999999999999
Q ss_pred hhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEE---ecceEEEE
Q 012693 210 EVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVII 286 (458)
Q Consensus 210 ~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i---~~~~~~~~ 286 (458)
.++++|.. .+|++||+|+++ +|+|||++|||+++++ ++++++++||+|++|++ +++++++|
T Consensus 284 la~~~l~k------~~I~av~~~~~~-----dle~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~~g~~~~~~~ 347 (512)
T 3iyg_Q 284 MALHYANK------YNIMLVRLNSKW-----DLRRLCKTVGATALPR-----LNPPVLEEMGHCDSVYLSEVGDTQVVVF 347 (512)
T ss_pred HHHHHHHH------CCeEEEEeCCHH-----HHHHHHHHhCCEEecc-----cccCCHHHCCcccEEEEEEeCCeEEEEE
Confidence 99987664 468999998754 4999999999999996 89999999999999975 46689999
Q ss_pred cCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHHHHhcC-CcCChh
Q 012693 287 GGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSG 365 (458)
Q Consensus 287 ~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a~~~g-vVpGGG 365 (458)
++|+. ++++|||+|||+|+++++|+||++|||||++|+++++| +|||||
T Consensus 348 ~~~~~------------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGG 397 (512)
T 3iyg_Q 348 KHEKE------------------------------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGG 397 (512)
T ss_pred EcccC------------------------------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCc
Confidence 98753 35679999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCC--cccccc
Q 012693 366 VALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARG--NYVDMF 438 (458)
Q Consensus 366 a~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~--~~~dm~ 438 (458)
++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+| ++.||+
T Consensus 398 a~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~ 477 (512)
T 3iyg_Q 398 ATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDML 477 (512)
T ss_pred HHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchH
Confidence 9999999999999875 899999999999999999999999999999999 999873 567899999965 999999
Q ss_pred ccCCccccccHHHHHHhhh
Q 012693 439 KCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 439 ~~gI~dp~~vk~~al~~A~ 457 (458)
+.|||||+.||+++|++|+
T Consensus 478 ~~gI~dp~~vk~~al~~A~ 496 (512)
T 3iyg_Q 478 EAGVLDTYLGKYWAIKLAT 496 (512)
T ss_pred hccCeEcHHHHHHHHHHHH
Confidence 9999999999999999986
No 20
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.3e-82 Score=668.70 Aligned_cols=392 Identities=12% Similarity=0.156 Sum_probs=351.6
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+|+||++||++++++++ |+||+.|++||++|.+.++++
T Consensus 51 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 124 (515)
T 3iyg_G 51 GNAILREIQVQHPAAKSM------IEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMIST 124 (515)
T ss_pred HHHHHHhcccCCHHHHHH------HHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC--c--------ceeEe--cCCCccceeEEE
Q 012693 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--D--------LITIF--DRKALYNELNFV 143 (458)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~ts~~~------~~~l~~li~~A~~~v~~~--~--------~I~i~--~g~~~~d~~~lv 143 (458)
|++++.|++ +.+.|.++|+||+++ .+.+++++++|+..+.++ + .|+|+ +|++.. +++++
T Consensus 125 L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~-ds~lv 203 (515)
T 3iyg_G 125 LKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIE-DSCVL 203 (515)
T ss_pred HHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcc-cceEE
Confidence 999999987 368899999999874 235678999999887622 2 15554 687775 69999
Q ss_pred eeEEEeccccCCccccccccceeeecCceEEEecc-------------ccCCHHHHHHHHh-----------HHHhcCCc
Q 012693 144 KGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNVIRQASL-----------PCMMQGQS 199 (458)
Q Consensus 144 ~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~-------------~i~~~~~i~~~l~-----------~i~~~~~~ 199 (458)
+||+|+++|.||.|+ .+++||+|+++|+ +|++++++.++++ ++.+.|.+
T Consensus 204 ~G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~ 276 (515)
T 3iyg_G 204 RGVMINKDVTHPRMR-------RYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPD 276 (515)
T ss_pred eeEEEeCCCCCCCCc-------ceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999763 4789999999998 5788888888877 88888888
Q ss_pred EEEEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCcee-eeEEEE
Q 012693 200 LLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-CKRVIA 278 (458)
Q Consensus 200 lvii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~-~~~v~i 278 (458)
+||++++|++.++++|..+ +|++++ ++++.+|+|||++|||+++++ ++++++++||+ |+.|++
T Consensus 277 vIi~~~~I~~~al~~L~~~------~I~av~-----~~~k~~leria~~tGa~ii~~-----l~~l~~~~LG~~a~~v~~ 340 (515)
T 3iyg_G 277 VVITEKGISDLAQHYLMRA------NITAIR-----RVRKTDNNRIARACGARIVSR-----PEELREEDVGTGAGLLEI 340 (515)
T ss_pred EEEECCccCHHHHHHHHHC------Cceeec-----cCCHHHHHHHHHHhCCeeecc-----ccccChhhcCCcccEEEE
Confidence 8888889999999988753 567875 567889999999999999997 88999999999 999975
Q ss_pred ---ecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHHH
Q 012693 279 ---TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAA 355 (458)
Q Consensus 279 ---~~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a 355 (458)
++++++||+||+++. .|||+|||+|+++++|+||++|||||++|++
T Consensus 341 ~~~g~~~~~~i~g~~~~~-------------------------------~~TIllrG~t~~~l~E~er~i~Dal~~~r~~ 389 (515)
T 3iyg_G 341 KKIGDEYFTFITECKDPK-------------------------------ACTILLRGASKEILSEVERNLQDAMQVCRNV 389 (515)
T ss_pred EEECCceEEEEeCCCCCC-------------------------------eEEEEEcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456899999998764 4899999999999999999999999999999
Q ss_pred Hhc-CCcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEe
Q 012693 356 KEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYN 428 (458)
Q Consensus 356 ~~~-gvVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~----~~~~~G~d 428 (458)
+++ ++|||||++|+++|++|++|+.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||
T Consensus 390 ~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d 469 (515)
T 3iyg_G 390 LLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVN 469 (515)
T ss_pred hhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeee
Confidence 865 69999999999999999999865 899999999999999999999999999999999 999863 24579999
Q ss_pred CCCCccccccccCCccccccHHHHHHhhh
Q 012693 429 PARGNYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 429 ~~~~~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
+.+|++.||++.|||||+.||+++|++|+
T Consensus 470 ~~~g~~~d~~~~gi~dp~~vk~~al~~A~ 498 (515)
T 3iyg_G 470 GETGTLVDMKELGIWEPLAVKLQTYKTAV 498 (515)
T ss_pred CCCCcccccHHcCCEEcHHHHHHHHHHHH
Confidence 99999999999999999999999999986
No 21
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=2.1e-82 Score=678.34 Aligned_cols=398 Identities=19% Similarity=0.202 Sum_probs=351.0
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 87 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 160 (562)
T 3p9d_E 87 GATILSQMELDNEIAKLL------VQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISK 160 (562)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCCH------HHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-------cceeEe--cCCCccceeEE
Q 012693 84 LDCQARKITTF------EEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNF 142 (458)
Q Consensus 84 L~~~s~~v~~~------~~l~~va~ts~~~------~~~l~~li~~A~~~v~~~-------~~I~i~--~g~~~~d~~~l 142 (458)
|+++++|++.. ++|.++|+||+++ .+.|++++++|+..+... +.|+|+ .|+++.| +++
T Consensus 161 L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~d-s~l 239 (562)
T 3p9d_E 161 LEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISD-SKL 239 (562)
T ss_dssp TTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGG-CEE
T ss_pred HHHhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhh-hce
Confidence 99999988632 6899999999975 357999999999988642 346665 5888765 799
Q ss_pred EeeEEEeccccCCccccccccceeeecCceEEEecc-------------ccCCHHH-----------HHHHHhHHHhcCC
Q 012693 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNV-----------IRQASLPCMMQGQ 198 (458)
Q Consensus 143 v~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~-------------~i~~~~~-----------i~~~l~~i~~~~~ 198 (458)
++||+|+++|.||||+++.+ .+..+++|+|+++++ +|+++++ +.++++++.+.|+
T Consensus 240 veGmv~dk~~~sp~m~~~~~-~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~ 318 (562)
T 3p9d_E 240 INGVILDKDFSHPQMPKCVL-PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGA 318 (562)
T ss_dssp ESSEEESSCCCTTSCCC------TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred eeeEEEecCCCCCCcCcccc-cccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999987541 011224555555443 4566665 6788999999999
Q ss_pred cEEEEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEE
Q 012693 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA 278 (458)
Q Consensus 199 ~lvii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i 278 (458)
||||++++|+++|+++|..|++ .+++++ ++++|+|||++|||+++++ ++++++++||+|+.|++
T Consensus 319 ~vvI~~~~I~~~Al~~L~~~~I------~~v~~v-----~k~~le~ia~~TGa~iis~-----l~~l~~~~LG~a~~v~~ 382 (562)
T 3p9d_E 319 DVVICQWGFDDEANHLLLQNDL------PAVRWV-----GGQELEHIAISTNGRIVPR-----FQDLSKDKLGTCSRIYE 382 (562)
T ss_dssp SCCEECSSCCSHHHHHHHTTTC------CCEECC-----CTTTHHHHHHHHCCCEEES-----SSCCCTTSCEECSCEEE
T ss_pred cEEEEeCCCCHHHHHHHHHCCC------EEEecc-----CHHHHHHHHHHhCCEEEec-----cccCCHHHCCcceEEEE
Confidence 9999999999999999998764 467765 4567999999999999996 89999999999999987
Q ss_pred -----ecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHH
Q 012693 279 -----TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQ 353 (458)
Q Consensus 279 -----~~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r 353 (458)
++++++||+||++++ .|||+|||+|+++++|+||++|||||++|
T Consensus 383 ~~ig~~~~~~~~i~g~~~~~-------------------------------~~TIllrG~te~~l~E~kr~i~DAL~~~r 431 (562)
T 3p9d_E 383 QEFGTTKDRMLIIEQSKETK-------------------------------TVTCFVRGSNKMIVDEAERALHDSLCVVR 431 (562)
T ss_dssp ECCSSSSCCEEEECCCSCCS-------------------------------CCEEEEECTTTTTHHHHTHHHHHHHHHHH
T ss_pred EEeccCCceEEEEecCCCCC-------------------------------eEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 368999999998764 48999999999999999999999999999
Q ss_pred HHHhcC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCee
Q 012693 354 AAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLG 426 (458)
Q Consensus 354 ~a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~----~~~~~G 426 (458)
+++++| +|||||++|+++|++|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|
T Consensus 432 ~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G 511 (562)
T 3p9d_E 432 NLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIG 511 (562)
T ss_dssp HHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBC
T ss_pred HHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCcee
Confidence 999999 9999999999999999999765 899999999999999999999999999999999 999862 457899
Q ss_pred EeCCCCccccccccCCccccccHHHHHHhhh
Q 012693 427 YNPARGNYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 427 ~d~~~~~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
||+.+|++.||++.|||||+.||+++|++|+
T Consensus 512 ~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 542 (562)
T 3p9d_E 512 VDCLGYGSNDMKELFVVDPFIGKKQQILLAT 542 (562)
T ss_dssp CBTTTTBCCBTTTTTCEEEHHHHHHHHHHHH
T ss_pred EecCCCcccchHhccCEEcHHHHHHHHHHHH
Confidence 9999999999999999999999999999986
No 22
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=3e-83 Score=683.28 Aligned_cols=394 Identities=16% Similarity=0.162 Sum_probs=353.9
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 66 G~TIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~ 139 (550)
T 3p9d_G 66 GATILKLLDVVHPAAKTL------VDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEK 139 (550)
T ss_dssp HHHHTTTSCCCSHHHHHH------HHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCC-----HHHHHHHHHHhcC------CChhHHHHHHHHHHhhcc-C------cceeEecCCCccceeEEEee
Q 012693 84 LDCQARKITT-----FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWE-N------DLITIFDRKALYNELNFVKG 145 (458)
Q Consensus 84 L~~~s~~v~~-----~~~l~~va~ts~~------~~~~l~~li~~A~~~v~~-~------~~I~i~~g~~~~d~~~lv~G 145 (458)
|+++++|++. .++|.++|+||++ +++.|++++++|+.++++ + +.+++ +|+++.| +++++|
T Consensus 140 L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~Gg~~~d-s~lv~G 217 (550)
T 3p9d_G 140 INELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PGGAMEE-SLFING 217 (550)
T ss_dssp HHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CSSCGGG-CCCCSS
T ss_pred HHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEe-cCCCccc-eeEEee
Confidence 9999999863 5689999998864 368899999999999984 3 34444 4777775 699999
Q ss_pred EEEeccccCCccccccccceeeecCceEEEeccc-------------cCCHHHHHH-----------HHhHHHhcCCcEE
Q 012693 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVIRQ-----------ASLPCMMQGQSLL 201 (458)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~-------------i~~~~~i~~-----------~l~~i~~~~~~lv 201 (458)
|+|+++|.||||.+.|+ .++||+|+++|++ |++++++.+ +++++.+.|+++|
T Consensus 218 ~~~dk~~~s~yf~~~~~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vV 293 (550)
T 3p9d_G 218 VAFKKTFSYAGFEQQPK----KFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIV 293 (550)
T ss_dssp EEECCCSSCTTCSCSCS----CCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEE
T ss_pred EEEeccccccccccCcc----cccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999987665 4899999999987 566666554 6778999999999
Q ss_pred EEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEE---
Q 012693 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA--- 278 (458)
Q Consensus 202 ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i--- 278 (458)
|++++|++.++++|..+ +++++++ +++.+|+|||++|||+++++ ++++++++||+|+.|++
T Consensus 294 i~~~~I~dla~~~L~~~------gI~~v~~-----v~k~~lerIa~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~i 357 (550)
T 3p9d_G 294 LSKLPIGDLATQFFADR------NIFCAGR-----VSADDMNRVIQAVGGSIQST-----TSDIKPEHLGTCALFEEMQI 357 (550)
T ss_dssp EESSCCCHHHHHTTGGG------TCEEEEC-----CCTTHHHHHHHHTCCCCBSS-----GGGCCGGGCCCCSBCCCCCC
T ss_pred EECCCccHHHHHHHHHc------CCccccC-----cCHHHHHHHHHHhCCceecc-----hhhCCHHHcCCceEEEEEEe
Confidence 99999999999877643 4678764 56788999999999999996 89999999999999975
Q ss_pred ecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHHHHhc
Q 012693 279 TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (458)
Q Consensus 279 ~~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a~~~ 358 (458)
+++++++|.||+++ +.|||+|||+|+++++|+||++|||||++|+++++
T Consensus 358 g~e~~~~~~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~ 406 (550)
T 3p9d_G 358 GSERYNLFQGCPQA-------------------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQN 406 (550)
T ss_dssp SSSCCEEEBCCTTC-------------------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCeEEEEEecCCCC-------------------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhc
Confidence 68899999998765 35899999999999999999999999999999999
Q ss_pred C-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHh---cCCCCeeEeCCCC
Q 012693 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLE---QDSSDLGYNPARG 432 (458)
Q Consensus 359 g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~---~~~~~~G~d~~~~ 432 (458)
| +|||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++ .++.++|||+.+|
T Consensus 407 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g 486 (550)
T 3p9d_G 407 KLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETE 486 (550)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSS
T ss_pred CCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCC
Confidence 9 9999999999999999999765 899999999999999999999999999999999 99987 3566899999999
Q ss_pred ccccccccCCccccccHHHHHHhhh
Q 012693 433 NYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 433 ~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
++.||++.|||||+.||+++|++|+
T Consensus 487 ~~~dm~~~gI~dp~~vk~~al~~A~ 511 (550)
T 3p9d_G 487 NIGDNFAKFVWEPALVKINALNSAT 511 (550)
T ss_dssp SBCCHHHHTCEEEHHHHHHHHHHHH
T ss_pred cccchHhccCEecHHHHHHHHHHHH
Confidence 9999999999999999999999986
No 23
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-81 Score=666.10 Aligned_cols=391 Identities=18% Similarity=0.240 Sum_probs=343.8
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+++||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 52 G~tIlk~i~v~hp~akll------~~~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (517)
T 3iyg_Z 52 GNVLLHEMQIQHPTASLI------AKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQF 125 (517)
T ss_pred HHHHHHHccCcCHHHHHH------HHHHHHHHHHhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccCc------ceeEe--cCCCccceeEEEeeEEE
Q 012693 84 LDCQARKIT-TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND------LITIF--DRKALYNELNFVKGMKL 148 (458)
Q Consensus 84 L~~~s~~v~-~~~~l~~va~ts~~~------~~~l~~li~~A~~~v~~~~------~I~i~--~g~~~~d~~~lv~G~~~ 148 (458)
|++++.|++ +.+.|.++|+||+++ .+.|++++++|+..+.+.+ .|+|. .|++. +++++++||+|
T Consensus 126 L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~-~ds~lv~G~v~ 204 (517)
T 3iyg_Z 126 LEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSE-TDTSLIRGLVL 204 (517)
T ss_pred HHhhCcCCCCCHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheeccCCCcCChhHheeeeecCCCc-cccceEeeEEE
Confidence 999999987 778999999999874 3568888888888775421 24443 56655 46999999999
Q ss_pred eccccCCccccccccceeeecCceEEEecccc-------------CCHHHHHH-----------HHhHHHh--------c
Q 012693 149 EWGLKSPYFFTHKNKKECVLDGALVLIYDTKI-------------SNSNVIRQ-----------ASLPCMM--------Q 196 (458)
Q Consensus 149 ~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~i-------------~~~~~i~~-----------~l~~i~~--------~ 196 (458)
+++|.||||+ .+++||+|+++|++| ++++++.+ .++.+.. .
T Consensus 205 dk~~~~p~m~-------~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~ 277 (517)
T 3iyg_Z 205 DHGARHPDMK-------KRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDS 277 (517)
T ss_pred eccCCCCCcc-------ccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 9999999864 378999999999865 33433322 3344433 3
Q ss_pred CCcEEEEe-cCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCC-ceeee
Q 012693 197 GQSLLVVA-EDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLK-LGSCK 274 (458)
Q Consensus 197 ~~~lvii~-~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~-LG~~~ 274 (458)
++|+||++ ++|+++++++|..+ ++++|++. ++.+|+|||++|||+++++ ++++++++ ||+|+
T Consensus 278 ~~~lvIi~~~~I~d~al~~L~~~------gI~~v~~v-----~~~~leria~~tGa~iv~~-----l~~l~~~~~LG~a~ 341 (517)
T 3iyg_Z 278 DKGFVVINQKGIDPFSLDALAKE------GIIALRRA-----KRRNMERLTLACGGIALNS-----LDDLNPDCLLGHAG 341 (517)
T ss_pred CCceEEEecccCCHHHHHHHHHC------CCEEEEec-----CHHHHHHHHHHhCCEEecc-----hhhCcccccCCcce
Confidence 56777665 89999999999874 46888864 5678999999999999996 89999999 99999
Q ss_pred EE---EEecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHH
Q 012693 275 RV---IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHA 351 (458)
Q Consensus 275 ~v---~i~~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a 351 (458)
| .+++++++||++|++++. |||+|||+|+++++|+||++|||||+
T Consensus 342 -v~e~~ig~~~~~~~~g~~~~~~-------------------------------~TI~lrG~t~~~l~E~kr~l~DAl~~ 389 (517)
T 3iyg_Z 342 -VYEYTLGEEKFTFIEKCNNPRS-------------------------------VTLLIKGPNKHTLTQIKDAIRDGLRA 389 (517)
T ss_pred -EEEEEEcCceEEEEeCCCCchh-------------------------------heeeecCCcHHHHHHHHHHHHHHHHH
Confidence 9 578999999999987653 79999999999999999999999999
Q ss_pred HHHHHhcC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCe
Q 012693 352 VQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDL 425 (458)
Q Consensus 352 ~r~a~~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~---~~~~~ 425 (458)
+|+++++| +|||||++|+++|++|++|+.. ++++|+|+++|++||+.+|++||+|||+|+.++ .+|++. ++.++
T Consensus 390 ~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~ 469 (517)
T 3iyg_Z 390 VKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLV 469 (517)
T ss_pred HHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcE
Confidence 99999999 9999999999999999999875 899999999999999999999999999999999 999873 45789
Q ss_pred eEeCCCCccccccccCCccccccHHHHHHhhh
Q 012693 426 GYNPARGNYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 426 G~d~~~~~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
|||+.+|++.||++.|||||+.||+++|++|+
T Consensus 470 G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 501 (517)
T 3iyg_Z 470 GVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCT 501 (517)
T ss_pred EEeCCCCcccchhhccCeecHHHHHHHHHHHH
Confidence 99999999999999999999999999999986
No 24
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=6.4e-83 Score=678.91 Aligned_cols=391 Identities=19% Similarity=0.215 Sum_probs=354.7
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc--CCChHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG--RANLTGLTQGFRMAADAVVR 82 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~--gi~P~~I~~G~~~a~~~~~~ 82 (458)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||+++.++++ |+||+.|++||++|.+.+++
T Consensus 60 G~tIlk~i~~~hP~Akll------~e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~ 133 (527)
T 3p9d_B 60 GATILKSIPLDNPAAKVL------VNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALD 133 (527)
T ss_dssp HHHHHHTCCCCCHHHHHH------HHHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCHHHHHH------HHHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999997 99999999999999999999
Q ss_pred HHhccccccCC-----HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccCc---ceeEe--cCCCccceeEEEeeE
Q 012693 83 NLDCQARKITT-----FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND---LITIF--DRKALYNELNFVKGM 146 (458)
Q Consensus 83 ~L~~~s~~v~~-----~~~l~~va~ts~~~------~~~l~~li~~A~~~v~~~~---~I~i~--~g~~~~d~~~lv~G~ 146 (458)
+|+++++|+++ .++|.++|+||+++ ++.|++++++|+.++++++ .|+|+ .|++.. ++++++||
T Consensus 134 ~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~-ds~lv~G~ 212 (527)
T 3p9d_B 134 ALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLS-DSFLDEGF 212 (527)
T ss_dssp HHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSS-CCCEESSC
T ss_pred HHHHhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcc-ccEEEEeE
Confidence 99999999885 68899999999986 6789999999999999886 78887 466665 58999999
Q ss_pred EEeccccCCccccccccceeeecCceEEEeccc--------------cCCHHHH-----------HHHHhHHHhcCCcEE
Q 012693 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK--------------ISNSNVI-----------RQASLPCMMQGQSLL 201 (458)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~--------------i~~~~~i-----------~~~l~~i~~~~~~lv 201 (458)
+|+++|.||| |+ .++||+|++++++ +++++++ .+.++.+.++|+|+|
T Consensus 213 ~~dk~~~~~~----p~----~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vv 284 (527)
T 3p9d_B 213 ILAKKFGNNQ----PK----RIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTF 284 (527)
T ss_dssp CCSCCCSSSC----CS----CCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEE
T ss_pred EEecccCCCC----Ce----eeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 9999999997 33 4689999997754 4455554 578899999999999
Q ss_pred EEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEE---E
Q 012693 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---A 278 (458)
Q Consensus 202 ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~---i 278 (458)
|++++|+++++++|..++ +++|++|+ +.+|+|||++|||+++++ ++++++++||+|+.|+ +
T Consensus 285 i~~~~I~~~al~~L~~~~------i~av~~~~-----~~dle~ia~~tGa~iv~~-----~~~~~~~~LG~a~~v~~~~i 348 (527)
T 3p9d_B 285 INRQLIYDYPEQLFTDLG------INSIEHAD-----FEGVERLALVTGGEVVST-----FDEPSKCKLGECDVIEEIML 348 (527)
T ss_dssp ESSCCCTTTHHHHHHHTC------BCCCCCCH-----HHHHHHHHHHTCCCCCST-----TSCCTTSCEECSBCCBCCCS
T ss_pred EECCCCCHHHHHHHHHCC------CEEEecCC-----HHHHHHHHHHhCCEEecc-----hhhCCHHHCCCCcEEEEEEe
Confidence 999999999999999864 68898765 355999999999999997 7889999999999997 6
Q ss_pred ecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHHHHHHHHhc
Q 012693 279 TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (458)
Q Consensus 279 ~~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~a~r~a~~~ 358 (458)
+++++++|.||+++ ++|||+|||+|+++++|+||++|||||++|+++++
T Consensus 349 g~~~~~~~~g~~~~-------------------------------~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~ 397 (527)
T 3p9d_B 349 GEQPFLKFSGCKAG-------------------------------EACTIVLRGATDQTLDEAERSLHDALSVLSQTTKE 397 (527)
T ss_dssp SSCCBCCBCSSCCS-------------------------------CCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHC
T ss_pred cceEEEEEECCCCC-------------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78999999998754 57999999999999999999999999999999999
Q ss_pred C-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCC
Q 012693 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARG 432 (458)
Q Consensus 359 g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~ 432 (458)
| +|||||++|+++|++|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|
T Consensus 398 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g 477 (527)
T 3p9d_B 398 TRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNG 477 (527)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSST
T ss_pred CCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCC
Confidence 9 9999999999999999999865 899999999999999999999999999999999 999873 557899999999
Q ss_pred ccccccccCCccccccHHHHHHhhh
Q 012693 433 NYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 433 ~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
++.||++.|||||+.||+++|++|+
T Consensus 478 ~~~dm~~~gI~dp~~vk~~al~~A~ 502 (527)
T 3p9d_B 478 TIADMRQLGIVESYKLKRAVVSSAS 502 (527)
T ss_dssp TCCCHHHHTCEEETTHHHHHHHHHH
T ss_pred CCcchHhccCEEcHHHHHHHHHHHH
Confidence 9999999999999999999999986
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=6.6e-81 Score=665.63 Aligned_cols=392 Identities=17% Similarity=0.229 Sum_probs=340.6
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 59 G~tIlk~i~v~hP~akll------~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 132 (546)
T 3p9d_F 59 GKVLLTEMQIQSPTAVLI------ARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKF 132 (546)
T ss_dssp HHHHHHTSCCCCHHHHHH------HHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCcCHHHHHH------HHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 6999999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC----CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-------cceeEe--cCCCccceeEEEe
Q 012693 84 LDCQARKIT----TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNFVK 144 (458)
Q Consensus 84 L~~~s~~v~----~~~~l~~va~ts~~~------~~~l~~li~~A~~~v~~~-------~~I~i~--~g~~~~d~~~lv~ 144 (458)
|++++.|++ +.+.|.++|+||+++ .+.|++++++|+..+.+. ..|++. .|++.. ++++++
T Consensus 133 L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~-ds~lv~ 211 (546)
T 3p9d_F 133 LDEFKISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPK-DTTFIK 211 (546)
T ss_dssp HHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTT-TCCCCS
T ss_pred HHHhhccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcc-ccEEEe
Confidence 999999884 678999999999985 457899999999887531 135554 466654 689999
Q ss_pred eEEEeccccCCccccccccceeeecCceEEEeccccC-------------CHHH-----------HHHHHhHHHh-----
Q 012693 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSNV-----------IRQASLPCMM----- 195 (458)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~i~-------------~~~~-----------i~~~l~~i~~----- 195 (458)
||+|+++|.||+|+ .+++||+|+++|+++. ++++ +...++.+..
T Consensus 212 G~v~dk~~~~~~m~-------~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v 284 (546)
T 3p9d_F 212 GLVLDHGGRHPDMP-------TRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEV 284 (546)
T ss_dssp SCEESCCCCSSSSC-------SSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred eEEEecccccccCc-------ceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999763 4789999999997642 2222 1233444443
Q ss_pred ----cCCcEEEEe-cCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCc
Q 012693 196 ----QGQSLLVVA-EDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKL 270 (458)
Q Consensus 196 ----~~~~lvii~-~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~L 270 (458)
+|+|+||++ ++|+++|+++|..|+ ++++++. ++.+|+|||++|||+++++ ++++++++|
T Consensus 285 ~~~~~g~~~vIi~~k~I~~~Al~~L~~~g------I~~vr~v-----~~~~leria~~tGa~ii~~-----l~~l~~~~L 348 (546)
T 3p9d_F 285 CGMDPDKGFVIINQKGIDPMSLDVFAKHN------ILALRRA-----KRRNMERLQLVTGGEAQNS-----VEDLSPQIL 348 (546)
T ss_dssp --------CEEEESSCCCHHHHHHHTTTT------CEEECCC-----CHHHHHHHHHTTTBCCCCC-----CSSCSTTCC
T ss_pred hhhccCCceEEEecCcCcHHHHHHHHHCC------CeeEecC-----CHHHHHHHHHHhCCEEecc-----hhhCCHhHC
Confidence 567766555 699999999999875 5788863 4678999999999999996 899999999
Q ss_pred eeeeEE---EEecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHH
Q 012693 271 GSCKRV---IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITN 347 (458)
Q Consensus 271 G~~~~v---~i~~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~D 347 (458)
|+|+.| .+++++|+||+||++++ .|||+|||+|+++++|+||++||
T Consensus 349 G~a~~v~~~~ig~~~~~~i~g~~~~~-------------------------------~~tI~lrG~te~~l~E~kr~l~D 397 (546)
T 3p9d_F 349 GFSGLVYQETIGEEKFTYVTENTDPK-------------------------------SCTILIKGSTHYALAQTKDAVRD 397 (546)
T ss_dssp BCCCCBCBCCCSSCCCEECSSCSCCS-------------------------------CEEEECCCSCHHHHHHHHHHHHH
T ss_pred CcccEEEEEEecCceEEEEecCCCCc-------------------------------eEEEEECCCCHHHHHHHHHHHHH
Confidence 999999 57899999999998765 48999999999999999999999
Q ss_pred HHHHHHHHHhcC-CcCChhHHHHHHHHHHHh---hcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-
Q 012693 348 ALHAVQAAKEEG-IVPGSGVALLYASKELDK---LQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ- 420 (458)
Q Consensus 348 Al~a~r~a~~~g-vVpGGGa~e~~~s~~L~~---~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~- 420 (458)
|||++|+++++| +|||||++|+++|++|++ |+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++.
T Consensus 398 Al~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h 477 (546)
T 3p9d_F 398 GLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDEL 477 (546)
T ss_dssp HHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHH
T ss_pred HHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 999999999998 999999999999999999 5665 899999999999999999999999999999999 999863
Q ss_pred -------CCCCeeEeCCCCccccccccCCccccccHHHHHHhhh
Q 012693 421 -------DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 421 -------~~~~~G~d~~~~~~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
++.++|||+.+|++.||++.|||||+.||+++|++|+
T Consensus 478 ~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 521 (546)
T 3p9d_F 478 DDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGAT 521 (546)
T ss_dssp HHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHH
T ss_pred hhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999986
No 26
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=3e-80 Score=662.43 Aligned_cols=392 Identities=15% Similarity=0.150 Sum_probs=350.6
Q ss_pred HHHHhhhccccCccccccchhhhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHH
Q 012693 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (458)
Q Consensus 5 ~~~il~~~~~~~p~~k~~~~~~~~~~~s~~qd~e~GDGTTtvvvLa~~LL~~~~~li~-gi~P~~I~~G~~~a~~~~~~~ 83 (458)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||+++.++++ |+||+.|++||++|.+.++++
T Consensus 68 G~TIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~ 141 (568)
T 3p9d_H 68 AATMLRELDIVHPAVKVL------VMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKE 141 (568)
T ss_dssp HHHHTTTCCCCCHHHHHH------HHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999977 7999999999999999999999999999999999 999999999999999999999
Q ss_pred Hhcccccc----CCHHHHHHHHHHhcC-----CChhHHHHHHHHHHhhccC-----c-------ceeEe--cCCCcccee
Q 012693 84 LDCQARKI----TTFEEIAQVGTTAAN-----GDGEIGELIAKVFEKGWEN-----D-------LITIF--DRKALYNEL 140 (458)
Q Consensus 84 L~~~s~~v----~~~~~l~~va~ts~~-----~~~~l~~li~~A~~~v~~~-----~-------~I~i~--~g~~~~d~~ 140 (458)
|++++.++ .+.++|.++|+||++ ++++|++++++|+.+++++ + .|+|+ .|++..| +
T Consensus 142 L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~d-S 220 (568)
T 3p9d_H 142 LDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSN-S 220 (568)
T ss_dssp HHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGG-C
T ss_pred HHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcch-h
Confidence 99999876 567899999999874 3578999999999999874 3 47776 4888764 7
Q ss_pred EEEeeEEEeccccCCccccccccceeeec---CceEEEeccc-------------cCCHHHHHH-----------HHhHH
Q 012693 141 NFVKGMKLEWGLKSPYFFTHKNKKECVLD---GALVLIYDTK-------------ISNSNVIRQ-----------ASLPC 193 (458)
Q Consensus 141 ~lv~G~~~~~g~~~~~~~~~~~~~~~~~~---~~~Il~~d~~-------------i~~~~~i~~-----------~l~~i 193 (458)
++++|++|+++|. +| +.+++ ||+|++++++ |++++++.+ +++++
T Consensus 221 ~lv~G~v~dk~~~--~m-------~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I 291 (568)
T 3p9d_H 221 TVIKGMVFNREPE--GH-------VKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEI 291 (568)
T ss_dssp EEESSCCBSSCBS--SG-------GGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccEEEeeccc--CC-------cEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999984 23 33677 9999999986 677777655 68889
Q ss_pred HhcCCcEEEEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceee
Q 012693 194 MMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSC 273 (458)
Q Consensus 194 ~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~ 273 (458)
.+.|+||||++++|+++++++|..+ +|++|++|+ +.+|+|||++|||+++++ ++++++++||+|
T Consensus 292 ~~~g~~vvi~~~~I~~~al~~L~~~------gI~av~~v~-----~~~leria~~tGa~ivs~-----l~~l~~~~LG~a 355 (568)
T 3p9d_H 292 ADMGVECIVAGAGVGELALHYLNRY------GILVLKVPS-----KFELRRLCRVCGATPLPR-----LGAPTPEELGLV 355 (568)
T ss_dssp HHTTCCEEEECSCCCHHHHHHHHHH------TCEEECCCC-----HHHHHHHHHHHSCCCCSS-----SSCCCGGGCEEC
T ss_pred HhcCCeEEEECCCcChHHHHHHHHC------CeEEEecCC-----HHHHHHHHHHhCCEEEec-----cccCCHHHCCcc
Confidence 9999999999999999999999875 479999875 456999999999999997 888999999999
Q ss_pred eEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchhHHHHHHHHHHHHHH
Q 012693 274 KRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALH 350 (458)
Q Consensus 274 ~~v~---i~~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~~r~i~DAl~ 350 (458)
+.|+ +++++++||++|+. |+++.|||+|||+|+++++|+||++|||||
T Consensus 356 ~~v~~~~ig~~~~~~~~g~~~-----------------------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~ 406 (568)
T 3p9d_H 356 ETVKTMEIGGDRVTVFKQEQG-----------------------------EISRTSTIILRGATQNNLDDIERAIDDGVA 406 (568)
T ss_dssp SCCCCCEETTEECBCCCCCSS-----------------------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCceEEEEecCCC-----------------------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHH
Confidence 9986 45689999999862 234679999999999999999999999999
Q ss_pred HHHHHHh--c-CCcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-----
Q 012693 351 AVQAAKE--E-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----- 420 (458)
Q Consensus 351 a~r~a~~--~-gvVpGGGa~e~~~s~~L~~~~~~-~~~e~~~i~~~a~AL~~ip~~La~NaG~d~~~v-~~l~~~----- 420 (458)
++|++++ + ++|||||++|+++|++|++|+.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++.
T Consensus 407 vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~ 486 (568)
T 3p9d_H 407 AVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTE 486 (568)
T ss_dssp HHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSS
T ss_pred HHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhc
Confidence 9999999 5 69999999999999999999765 899999999999999999999999999999999 999874
Q ss_pred ------CCCCeeEeCCCCc---cccccccCCccccccHHHHHHhhh
Q 012693 421 ------DSSDLGYNPARGN---YVDMFKCGDVDPLKHVPSEFAKAT 457 (458)
Q Consensus 421 ------~~~~~G~d~~~~~---~~dm~~~gI~dp~~vk~~al~~A~ 457 (458)
++.++|||+.+|+ +.||++.|||||+.||+++|++|+
T Consensus 487 ~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~ 532 (568)
T 3p9d_H 487 PGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVAT 532 (568)
T ss_dssp CCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred ccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHH
Confidence 3457999999997 999999999999999999999986
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-48 Score=353.37 Aligned_cols=189 Identities=38% Similarity=0.559 Sum_probs=185.1
Q ss_pred eEEEeeEEEeccccCCccccccccceeeecCceEEEeccccCCHHHHHHHHhHHHhcCCcEEEEecCcchhhhhhHHhhh
Q 012693 140 LNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDF 219 (458)
Q Consensus 140 ~~lv~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~i~~~~~i~~~l~~i~~~~~~lvii~~~i~~~al~~l~~n~ 219 (458)
+++++||.||+||+||||++++++|.++++||+||++|.||++.++++|+||.+.++|+||+|++++++++||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHH
Q 012693 220 TCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERC 299 (458)
Q Consensus 220 ~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~~~~~~~~i~~r~ 299 (458)
++|.++++|||+|+||+.|+..|+|||.+|||++++++.|+++++++.++||+|++|.+++|+|++++|.+++++|+.|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcch----HHHHHHHhhhcCCcEEE
Q 012693 300 EQLRSTIKLSTS----DKLKDRLAKLSGGYAVL 328 (458)
Q Consensus 300 ~~l~~~i~~~~s----~~l~eRl~~l~g~~~tI 328 (458)
++|+++++.++| |+|+||||||+||+|.|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999988 99999999999999865
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=5.2e-47 Score=343.42 Aligned_cols=184 Identities=35% Similarity=0.532 Sum_probs=180.4
Q ss_pred eeEEEeccccCCccccccccceeeecCceEEEeccccCCHHHHHHHHhHHHhcCCcEEEEecCcchhhhhhHHhhhcCCC
Q 012693 144 KGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTT 223 (458)
Q Consensus 144 ~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~i~~~~~i~~~l~~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~ 223 (458)
+||.||+||+||||++++++|.+++++|+||++|.||++.++++|+||.+.++|+||+|++++++++||++|+.|+++|.
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg~ 92 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRGI 92 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHTS
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccce
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHH
Q 012693 224 EKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLR 303 (458)
Q Consensus 224 ~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~~~~~~~~i~~r~~~l~ 303 (458)
++++|||+|+||+.|+..|+|||.+|||++++++.++++++++.++||+|++|++++|+|++++|.+++++|+.|+++|+
T Consensus 93 l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qIr 172 (201)
T 3osx_A 93 VKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQIR 172 (201)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcch----HHHHHHHhhhcCCcEE
Q 012693 304 STIKLSTS----DKLKDRLAKLSGGYAV 327 (458)
Q Consensus 304 ~~i~~~~s----~~l~eRl~~l~g~~~t 327 (458)
++++.++| |+|+||||||+||+|+
T Consensus 173 ~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 173 QQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 99999988 9999999999999874
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=1e-37 Score=269.81 Aligned_cols=144 Identities=34% Similarity=0.535 Sum_probs=141.8
Q ss_pred eEEEeccccCCccccccccceeeecCceEEEeccccCCHHHHHHHHhHHHhcCCcEEEEecCcchhhhhhHHhhhcCCCc
Q 012693 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTE 224 (458)
Q Consensus 145 G~~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~i~~~~~i~~~l~~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~ 224 (458)
||.||+||+||||++++++|.+++++|+||++|.||++.++++|.||++.++|+||+|++++++++||++|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEEEecceEEEEcC
Q 012693 225 KVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGG 288 (458)
Q Consensus 225 ~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~~ 288 (458)
+++|||+|+||++|++.|+|||.+|||++++++.|+++++++.++||+|++|++++|+|++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999875
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.86 E-value=1.1e-21 Score=179.70 Aligned_cols=144 Identities=10% Similarity=0.156 Sum_probs=118.3
Q ss_pred eeEEEeeEEEeccccCCccccccccceeeecCceEEEeccccC-------------CHH-----------HHHHHHhHHH
Q 012693 139 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPCM 194 (458)
Q Consensus 139 ~~~lv~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~i~-------------~~~-----------~i~~~l~~i~ 194 (458)
+|++++|++|++++.+|.|+ ..++||+|+++++++. +++ .+..++++|.
T Consensus 3 dS~lv~Gvvl~k~~~~~~mp-------k~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~ 75 (178)
T 1gml_A 3 DSCVLRGVMINKDVTHPRMR-------RYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDII 75 (178)
T ss_dssp CCSEEEEEEESCCCSSTTSC-------CEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEEeccccCCCCC-------cccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 58999999999999888663 3689999999997543 222 2456688899
Q ss_pred hcCCcEEEEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCcee-e
Q 012693 195 MQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-C 273 (458)
Q Consensus 195 ~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~-~ 273 (458)
+.|+++|+++++|++.|+++|..+ +|++|++ +++++|+|||++|||+++++ ++++++++||+ |
T Consensus 76 ~~g~nVVl~~k~I~d~a~~~l~k~------gI~~vr~-----v~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~ 139 (178)
T 1gml_A 76 QLKPDVVITEKGISDLAQHYLMRA------NVTAIRR-----VRKTDNNRIARACGARIVSR-----PEELREDDVGTGA 139 (178)
T ss_dssp TTCCSEEEESSCBCHHHHHHHHHT------TCEEECC-----CCHHHHHHHHHHHCCCEESC-----GGGCCGGGSBCCE
T ss_pred hcCCcEEEECCcccHHHHHHHHHC------CCEEEec-----CCHHHHHHHHHHhCCeEeCC-----hhhCChhhhCCcc
Confidence 999999999999999999988875 5789985 45678999999999999997 89999999999 9
Q ss_pred eEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcchHHHHHHHhhhcCCcEEEEEccCchh
Q 012693 274 KRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKA 336 (458)
Q Consensus 274 ~~v~---i~~~~~~~~~~~~~~~~i~~r~~~l~~~i~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~ 336 (458)
+.|+ +++++++||+||++++ .|||++||+|.+
T Consensus 140 ~~v~~~~ig~~~~~~~~gc~~~~-------------------------------~~TIllRG~~~~ 174 (178)
T 1gml_A 140 GLLEIKKIGDEYFTFITDCKDPK-------------------------------ACTILLRGASHH 174 (178)
T ss_dssp EEEEEEEETTEEEEEEEEESSTT-------------------------------SCEEEEEC----
T ss_pred cEEEEEEECCeEEEEEECCCCCC-------------------------------EEEEEEECCCcc
Confidence 9986 5788999999998764 489999999864
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.76 E-value=5.5e-18 Score=152.24 Aligned_cols=127 Identities=17% Similarity=0.270 Sum_probs=106.8
Q ss_pred EeeEEEeccccCCccccccccceeeecCceEEEecccc-------------CCHHH-----------HHHHHhHHHhcCC
Q 012693 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQGQ 198 (458)
Q Consensus 143 v~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Il~~d~~i-------------~~~~~-----------i~~~l~~i~~~~~ 198 (458)
++|++|++++.+|.|++ .++||+|+++++++ +++++ +...+++|.+.|+
T Consensus 1 i~Gvv~~k~~~~~~mpk-------~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPD-------VVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTTSCS-------EEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCCCCc-------CcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 47999999999987643 77999999999864 34433 4456888999999
Q ss_pred cEEEEecCcchhhhhhHHhhhcCCCccEEEEEcCCCccchhhhHHHHHHHhCCEEecCCCCCCccCCCCCCceeeeEEE-
Q 012693 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI- 277 (458)
Q Consensus 199 ~lvii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~le~la~~tG~~i~s~~~~~~~~~~~~~~LG~~~~v~- 277 (458)
++|+++++|++.|+++|..+ +|+++++ +++++|+|||++|||+++++ ++++++++||+|+.|+
T Consensus 74 nVVl~~k~I~d~a~~~l~k~------gI~~v~~-----v~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKE------GIYAVRR-----VKKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHT------TCEEECS-----CCHHHHHHHHHHHTCCCBSS-----TTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHC------CCEEEcc-----CCHHHHHHHHHHhCCeeeCc-----cccCCcccCccceEEEE
Confidence 99999999999999988874 5789985 45678999999999999997 8999999999999996
Q ss_pred --EecceEEEEcCCCCh
Q 012693 278 --ATMDNVVIIGGSGEL 292 (458)
Q Consensus 278 --i~~~~~~~~~~~~~~ 292 (458)
++++++++|+||++.
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 578899999999764
No 32
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=32.74 E-value=92 Score=23.71 Aligned_cols=36 Identities=17% Similarity=0.249 Sum_probs=26.6
Q ss_pred CCHHHHHHHHhHHHhcCCcEEEEecCcchhhhhhHH
Q 012693 181 SNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIA 216 (458)
Q Consensus 181 ~~~~~i~~~l~~i~~~~~~lvii~~~i~~~al~~l~ 216 (458)
.+.+++..+++.++..|+|||++-.+-+..-.+.+-
T Consensus 35 tssqdirdiiksmkdngkplvvfvngasqndvnefq 70 (112)
T 2lnd_A 35 TSSQDIRDIIKSMKDNGKPLVVFVNGASQNDVNEFQ 70 (112)
T ss_dssp CSHHHHHHHHHHHTTCCSCEEEEECSCCHHHHHHHH
T ss_pred cchhhHHHHHHHHHhcCCeEEEEecCcccccHHHHH
Confidence 456789999999999999999876665554444333
No 33
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=22.85 E-value=85 Score=22.05 Aligned_cols=34 Identities=3% Similarity=0.033 Sum_probs=26.2
Q ss_pred HHhhcc-CCChHHHHHHHHHH----HHHHHHHHhccccc
Q 012693 57 AFKALG-RANLTGLTQGFRMA----ADAVVRNLDCQARK 90 (458)
Q Consensus 57 ~~~li~-gi~P~~I~~G~~~a----~~~~~~~L~~~s~~ 90 (458)
...|++ |+++.....+++.. ++.++++|.+++.|
T Consensus 13 lq~L~eMGFd~erae~Alk~Tg~~Gle~AmewL~k~~~~ 51 (54)
T 2cos_A 13 LQELVNAGCDQEMAGRALKQTGSRSIEAALEYISKMSGP 51 (54)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHTSCCHHHHHHHHHHHSCS
T ss_pred HHHHHHcCCCHHHHHHHHHHhCcccHHHHHHHHHHhcCC
Confidence 356788 89888877777765 56888889888876
Done!